AMIS_52070 35cab59a0708b72273056c83a9832d3b 122 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 28 119 2.2E-32 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AMIS_52070 35cab59a0708b72273056c83a9832d3b 122 SUPERFAMILY SSF54534 14 121 1.59E-39 T 14-10-2018 AMIS_52070 35cab59a0708b72273056c83a9832d3b 122 Gene3D G3DSA:3.10.50.40 7 121 2.4E-41 T 14-10-2018 AMIS_38030 19e6a6a6a4c7b8c27de027a8975be4d9 340 Pfam PF00296 Luciferase-like monooxygenase 14 217 7.4E-30 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMIS_38030 19e6a6a6a4c7b8c27de027a8975be4d9 340 PIRSF PIRSF000337 239 321 4.2E-8 T 14-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 AMIS_38030 19e6a6a6a4c7b8c27de027a8975be4d9 340 PIRSF PIRSF000337 8 227 8.5E-51 T 14-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 AMIS_38030 19e6a6a6a4c7b8c27de027a8975be4d9 340 Gene3D G3DSA:3.20.20.30 2 328 4.4E-85 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_38030 19e6a6a6a4c7b8c27de027a8975be4d9 340 SUPERFAMILY SSF51679 13 313 1.31E-62 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_71910 c8c665a080bc3dc8947658ca52c9603a 348 Gene3D G3DSA:1.10.260.150 32 320 1.8E-67 T 14-10-2018 AMIS_71910 c8c665a080bc3dc8947658ca52c9603a 348 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 64 249 8.9E-35 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain AMIS_47850 39e58799c38843d6c4b778ace0de7199 408 Pfam PF07690 Major Facilitator Superfamily 21 223 1.3E-8 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_47850 39e58799c38843d6c4b778ace0de7199 408 Gene3D G3DSA:1.20.1250.20 220 401 6.9E-13 T 14-10-2018 AMIS_47850 39e58799c38843d6c4b778ace0de7199 408 Gene3D G3DSA:1.20.1250.20 14 195 2.5E-12 T 14-10-2018 AMIS_47850 39e58799c38843d6c4b778ace0de7199 408 SUPERFAMILY SSF103473 6 402 2.49E-32 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_4540 3e24c874ce1f650a98e12606844c78f1 248 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 129 245 1.0E-10 T 14-10-2018 AMIS_4540 3e24c874ce1f650a98e12606844c78f1 248 Gene3D G3DSA:2.60.120.200 38 246 1.3E-13 T 14-10-2018 AMIS_4540 3e24c874ce1f650a98e12606844c78f1 248 SUPERFAMILY SSF49899 43 245 4.49E-16 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily AMIS_75010 6bca71caa0335821d954e2dbedafaeaa 203 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 8 178 2.4E-42 T 14-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 AMIS_75010 6bca71caa0335821d954e2dbedafaeaa 203 Pfam PF01386 Ribosomal L25p family 6 94 2.0E-25 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 AMIS_75010 6bca71caa0335821d954e2dbedafaeaa 203 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 4 93 2.0E-16 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 AMIS_75010 6bca71caa0335821d954e2dbedafaeaa 203 Gene3D G3DSA:2.170.120.20 98 182 1.8E-13 T 14-10-2018 IPR037121 Ribosomal protein L25, C-terminal AMIS_75010 6bca71caa0335821d954e2dbedafaeaa 203 SUPERFAMILY SSF50715 4 188 4.84E-47 T 14-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AMIS_75010 6bca71caa0335821d954e2dbedafaeaa 203 Gene3D G3DSA:2.40.240.10 2 97 3.6E-26 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AMIS_75010 6bca71caa0335821d954e2dbedafaeaa 203 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 102 181 1.1E-15 T 14-10-2018 IPR020057 Ribosomal protein L25, beta domain AMIS_75010 6bca71caa0335821d954e2dbedafaeaa 203 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 4 182 24.658 T 14-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 AMIS_24140 eed1b47d8f70790cf60a29036b9c90b1 383 Pfam PF01266 FAD dependent oxidoreductase 12 353 8.0E-67 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AMIS_24140 eed1b47d8f70790cf60a29036b9c90b1 383 Gene3D G3DSA:3.50.50.60 12 358 2.6E-108 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_24140 eed1b47d8f70790cf60a29036b9c90b1 383 SUPERFAMILY SSF51905 11 372 3.95E-56 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_24140 eed1b47d8f70790cf60a29036b9c90b1 383 Gene3D G3DSA:3.30.9.10 91 320 2.6E-108 T 14-10-2018 AMIS_40250 759ca72155fe722d1bc146b6f6cc2af8 539 Pfam PF00682 HMGL-like 33 310 1.1E-60 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 AMIS_40250 759ca72155fe722d1bc146b6f6cc2af8 539 SUPERFAMILY SSF110921 449 537 6.54E-18 T 14-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AMIS_40250 759ca72155fe722d1bc146b6f6cc2af8 539 Gene3D G3DSA:3.30.160.270 373 539 7.7E-45 T 14-10-2018 AMIS_40250 759ca72155fe722d1bc146b6f6cc2af8 539 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 38 54 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AMIS_40250 759ca72155fe722d1bc146b6f6cc2af8 539 Gene3D G3DSA:3.20.20.70 10 372 6.3E-138 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_40250 759ca72155fe722d1bc146b6f6cc2af8 539 SUPERFAMILY SSF89000 384 433 4.32E-14 T 14-10-2018 AMIS_40250 759ca72155fe722d1bc146b6f6cc2af8 539 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 240 253 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AMIS_40250 759ca72155fe722d1bc146b6f6cc2af8 539 SMART SM00917 418 538 5.0E-12 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AMIS_40250 759ca72155fe722d1bc146b6f6cc2af8 539 SUPERFAMILY SSF51569 20 327 7.69E-87 T 14-10-2018 AMIS_40250 759ca72155fe722d1bc146b6f6cc2af8 539 Hamap MF_00572 2-isopropylmalate synthase [leuA]. 3 539 47.774 T 14-10-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AMIS_40250 759ca72155fe722d1bc146b6f6cc2af8 539 Pfam PF08502 LeuA allosteric (dimerisation) domain 418 537 2.0E-16 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AMIS_25640 1c5ccaea6ccf8490dbb00ba87cb927a7 652 Gene3D G3DSA:1.10.287.130 278 344 2.5E-19 T 14-10-2018 AMIS_25640 1c5ccaea6ccf8490dbb00ba87cb927a7 652 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 388 508 7.1E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_25640 1c5ccaea6ccf8490dbb00ba87cb927a7 652 SUPERFAMILY SSF52172 528 646 2.99E-29 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_25640 1c5ccaea6ccf8490dbb00ba87cb927a7 652 SMART SM00091 144 213 1.8E-7 T 14-10-2018 IPR000014 PAS domain AMIS_25640 1c5ccaea6ccf8490dbb00ba87cb927a7 652 SMART SM00091 223 289 280.0 T 14-10-2018 IPR000014 PAS domain AMIS_25640 1c5ccaea6ccf8490dbb00ba87cb927a7 652 SUPERFAMILY SSF55874 336 511 3.14E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_25640 1c5ccaea6ccf8490dbb00ba87cb927a7 652 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 141 262 7.5E-24 T 14-10-2018 IPR000014 PAS domain AMIS_25640 1c5ccaea6ccf8490dbb00ba87cb927a7 652 Pfam PF00512 His Kinase A (phospho-acceptor) domain 280 345 2.8E-6 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_25640 1c5ccaea6ccf8490dbb00ba87cb927a7 652 Pfam PF13426 PAS domain 155 257 2.3E-17 T 14-10-2018 IPR000014 PAS domain AMIS_25640 1c5ccaea6ccf8490dbb00ba87cb927a7 652 SUPERFAMILY SSF55785 134 256 2.62E-24 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_25640 1c5ccaea6ccf8490dbb00ba87cb927a7 652 PRINTS PR00344 Bacterial sensor protein C-terminal signature 457 467 2.4E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_25640 1c5ccaea6ccf8490dbb00ba87cb927a7 652 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 488 2.4E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_25640 1c5ccaea6ccf8490dbb00ba87cb927a7 652 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 453 2.4E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_25640 1c5ccaea6ccf8490dbb00ba87cb927a7 652 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 507 2.4E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_25640 1c5ccaea6ccf8490dbb00ba87cb927a7 652 SMART SM00086 216 258 3.1E-9 T 14-10-2018 IPR001610 PAC motif AMIS_25640 1c5ccaea6ccf8490dbb00ba87cb927a7 652 SMART SM00387 387 510 7.9E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_25640 1c5ccaea6ccf8490dbb00ba87cb927a7 652 Gene3D G3DSA:3.30.565.10 347 515 1.2E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_25640 1c5ccaea6ccf8490dbb00ba87cb927a7 652 Gene3D G3DSA:3.30.450.20 136 277 1.1E-29 T 14-10-2018 AMIS_25640 1c5ccaea6ccf8490dbb00ba87cb927a7 652 SMART SM00448 530 641 9.3E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_25640 1c5ccaea6ccf8490dbb00ba87cb927a7 652 SMART SM00388 280 346 1.3E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_25640 1c5ccaea6ccf8490dbb00ba87cb927a7 652 Pfam PF00072 Response regulator receiver domain 532 641 9.1E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_25640 1c5ccaea6ccf8490dbb00ba87cb927a7 652 Gene3D G3DSA:3.40.50.2300 524 651 9.2E-27 T 14-10-2018 AMIS_25640 1c5ccaea6ccf8490dbb00ba87cb927a7 652 SUPERFAMILY SSF47384 271 344 7.26E-10 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_57170 73c6f8155beff537ba613f6d4aa08774 428 Gene3D G3DSA:1.20.140.10 261 414 5.5E-19 T 14-10-2018 AMIS_57170 73c6f8155beff537ba613f6d4aa08774 428 SUPERFAMILY SSF47203 272 406 2.42E-13 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMIS_57170 73c6f8155beff537ba613f6d4aa08774 428 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 153 242 4.2E-13 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMIS_57170 73c6f8155beff537ba613f6d4aa08774 428 SUPERFAMILY SSF56645 21 251 4.32E-40 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMIS_57170 73c6f8155beff537ba613f6d4aa08774 428 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 274 395 6.6E-15 T 14-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain AMIS_57170 73c6f8155beff537ba613f6d4aa08774 428 PIRSF PIRSF016578 135 401 9.8E-26 T 14-10-2018 AMIS_57170 73c6f8155beff537ba613f6d4aa08774 428 PIRSF PIRSF016578 8 139 5.7E-16 T 14-10-2018 AMIS_57170 73c6f8155beff537ba613f6d4aa08774 428 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 31 103 8.3E-12 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMIS_57170 73c6f8155beff537ba613f6d4aa08774 428 Gene3D G3DSA:1.10.540.10 9 140 6.4E-26 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMIS_57170 73c6f8155beff537ba613f6d4aa08774 428 Gene3D G3DSA:2.40.110.10 156 256 1.2E-21 T 14-10-2018 AMIS_15550 ba6651f67957b97f7ba164395419761f 208 TIGRFAM TIGR03085 TIGR03085: TIGR03085 family protein 5 200 4.3E-64 T 14-10-2018 IPR017519 Conserved hypothetical protein CHP03085 AMIS_15550 ba6651f67957b97f7ba164395419761f 208 TIGRFAM TIGR03083 TIGR03083: uncharacterized Actinobacterial protein TIGR03083 5 183 7.6E-29 T 14-10-2018 IPR017517 Conserved hypothetical protein CHP03083, actinobacterial-type AMIS_15550 ba6651f67957b97f7ba164395419761f 208 Pfam PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain 9 57 5.7E-6 T 14-10-2018 IPR024344 Mycothiol-dependent maleylpyruvate isomerase, metal-binding domain GO:0046872 AMIS_15550 ba6651f67957b97f7ba164395419761f 208 SUPERFAMILY SSF109854 6 114 1.83E-8 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes AMIS_15550 ba6651f67957b97f7ba164395419761f 208 Gene3D G3DSA:1.20.120.450 2 85 6.5E-5 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes AMIS_190 18bb55228803b19a7be164defbfa8f60 576 Gene3D G3DSA:3.40.50.800 5 560 3.6E-197 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily AMIS_190 18bb55228803b19a7be164defbfa8f60 576 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 3 568 1.3E-152 T 14-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AMIS_190 18bb55228803b19a7be164defbfa8f60 576 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 96 467 2.6E-40 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMIS_190 18bb55228803b19a7be164defbfa8f60 576 Gene3D G3DSA:3.30.930.10 13 473 3.6E-197 T 14-10-2018 AMIS_190 18bb55228803b19a7be164defbfa8f60 576 SUPERFAMILY SSF55681 12 486 4.98E-86 T 14-10-2018 AMIS_190 18bb55228803b19a7be164defbfa8f60 576 SUPERFAMILY SSF52954 469 574 5.74E-22 T 14-10-2018 AMIS_190 18bb55228803b19a7be164defbfa8f60 576 Pfam PF03129 Anticodon binding domain 484 573 6.8E-12 T 14-10-2018 IPR004154 Anticodon-binding AMIS_190 18bb55228803b19a7be164defbfa8f60 576 Pfam PF04073 Aminoacyl-tRNA editing domain 257 386 1.8E-18 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AMIS_190 18bb55228803b19a7be164defbfa8f60 576 Hamap MF_01569 Proline--tRNA ligase [proS]. 3 576 34.788 T 14-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AMIS_190 18bb55228803b19a7be164defbfa8f60 576 SUPERFAMILY SSF55826 221 387 1.28E-10 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 AMIS_190 18bb55228803b19a7be164defbfa8f60 576 PRINTS PR01046 Prolyl-tRNA synthetase signature 136 144 1.6E-14 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AMIS_190 18bb55228803b19a7be164defbfa8f60 576 PRINTS PR01046 Prolyl-tRNA synthetase signature 146 157 1.6E-14 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AMIS_190 18bb55228803b19a7be164defbfa8f60 576 PRINTS PR01046 Prolyl-tRNA synthetase signature 70 88 1.6E-14 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AMIS_190 18bb55228803b19a7be164defbfa8f60 576 PRINTS PR01046 Prolyl-tRNA synthetase signature 106 117 1.6E-14 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AMIS_190 18bb55228803b19a7be164defbfa8f60 576 Gene3D G3DSA:3.90.960.10 242 396 3.6E-197 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 AMIS_43900 7e8af87d7ac424266aa110ded98f6102 292 Pfam PF12697 Alpha/beta hydrolase family 35 278 3.5E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_43900 7e8af87d7ac424266aa110ded98f6102 292 SUPERFAMILY SSF53474 18 289 3.14E-25 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_43900 7e8af87d7ac424266aa110ded98f6102 292 Gene3D G3DSA:3.40.50.1820 10 291 1.4E-27 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_5890 f4cc39f7b322dec7b200904a308bcf38 239 Pfam PF00687 Ribosomal protein L1p/L10e family 32 220 4.9E-51 T 14-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein AMIS_5890 f4cc39f7b322dec7b200904a308bcf38 239 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 4 227 4.7E-102 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 AMIS_5890 f4cc39f7b322dec7b200904a308bcf38 239 SUPERFAMILY SSF56808 6 227 1.05E-82 T 14-10-2018 IPR023674 Ribosomal protein L1-like AMIS_5890 f4cc39f7b322dec7b200904a308bcf38 239 PIRSF PIRSF002155 1 227 3.5E-77 T 14-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_5890 f4cc39f7b322dec7b200904a308bcf38 239 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 42.829 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 AMIS_5890 f4cc39f7b322dec7b200904a308bcf38 239 Gene3D G3DSA:3.30.190.20 21 225 1.1E-80 T 14-10-2018 AMIS_5890 f4cc39f7b322dec7b200904a308bcf38 239 Gene3D G3DSA:3.40.50.790 68 159 1.1E-80 T 14-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich AMIS_5890 f4cc39f7b322dec7b200904a308bcf38 239 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 14-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_34510 f48018dbc9f870c5825fe2ee0dc011e1 350 TIGRFAM TIGR03073 release_rtcB: release factor H-coupled RctB family protein 3 323 3.3E-91 T 14-10-2018 IPR017510 Release factor H-coupled RctB family protein AMIS_34510 f48018dbc9f870c5825fe2ee0dc011e1 350 SUPERFAMILY SSF103365 9 333 6.8E-78 T 14-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 AMIS_34510 f48018dbc9f870c5825fe2ee0dc011e1 350 Pfam PF01139 tRNA-splicing ligase RtcB 99 333 3.1E-46 T 14-10-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 AMIS_34510 f48018dbc9f870c5825fe2ee0dc011e1 350 Gene3D G3DSA:3.90.1860.10 2 89 7.0E-15 T 14-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 AMIS_34510 f48018dbc9f870c5825fe2ee0dc011e1 350 Gene3D G3DSA:3.90.1860.10 90 334 2.7E-57 T 14-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 AMIS_34510 f48018dbc9f870c5825fe2ee0dc011e1 350 Pfam PF01139 tRNA-splicing ligase RtcB 20 77 2.3E-8 T 14-10-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 AMIS_69530 461b837786464efc0495d18a40ee5f4a 445 Gene3D G3DSA:3.30.830.10 254 441 2.0E-62 T 14-10-2018 AMIS_69530 461b837786464efc0495d18a40ee5f4a 445 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 58 81 - T 14-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 AMIS_69530 461b837786464efc0495d18a40ee5f4a 445 Gene3D G3DSA:3.30.830.10 27 239 4.3E-67 T 14-10-2018 AMIS_69530 461b837786464efc0495d18a40ee5f4a 445 SUPERFAMILY SSF63411 27 234 2.38E-56 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMIS_69530 461b837786464efc0495d18a40ee5f4a 445 Pfam PF00675 Insulinase (Peptidase family M16) 37 184 6.5E-40 T 14-10-2018 IPR011765 Peptidase M16, N-terminal AMIS_69530 461b837786464efc0495d18a40ee5f4a 445 SUPERFAMILY SSF63411 257 439 3.35E-50 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMIS_69530 461b837786464efc0495d18a40ee5f4a 445 Pfam PF05193 Peptidase M16 inactive domain 191 369 2.4E-40 T 14-10-2018 IPR007863 Peptidase M16, C-terminal AMIS_45790 16ec724204e1c12b001fff677fbfda49 487 Gene3D G3DSA:2.30.40.10 13 416 4.7E-103 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMIS_45790 16ec724204e1c12b001fff677fbfda49 487 SUPERFAMILY SSF51556 60 360 3.56E-54 T 14-10-2018 IPR032466 Metal-dependent hydrolase AMIS_45790 16ec724204e1c12b001fff677fbfda49 487 SUPERFAMILY SSF51338 7 418 3.89E-22 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMIS_45790 16ec724204e1c12b001fff677fbfda49 487 Gene3D G3DSA:3.20.20.140 62 418 4.7E-103 T 14-10-2018 AMIS_45790 16ec724204e1c12b001fff677fbfda49 487 Pfam PF01979 Amidohydrolase family 57 410 3.4E-30 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AMIS_12210 bd6a0cda2b15d6798f38f82760c2372f 126 Gene3D G3DSA:3.30.450.30 3 126 3.0E-6 T 14-10-2018 AMIS_13190 b755235ecafcf15afc96141a51c1d1dd 746 Gene3D G3DSA:3.40.50.970 406 604 3.1E-38 T 14-10-2018 AMIS_13190 b755235ecafcf15afc96141a51c1d1dd 746 Gene3D G3DSA:3.40.50.920 615 745 7.5E-24 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AMIS_13190 b755235ecafcf15afc96141a51c1d1dd 746 SUPERFAMILY SSF52922 612 743 1.57E-22 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AMIS_13190 b755235ecafcf15afc96141a51c1d1dd 746 SMART SM00861 408 587 6.3E-18 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AMIS_13190 b755235ecafcf15afc96141a51c1d1dd 746 Pfam PF02780 Transketolase, C-terminal domain 626 726 4.3E-20 T 14-10-2018 IPR033248 Transketolase, C-terminal domain AMIS_13190 b755235ecafcf15afc96141a51c1d1dd 746 SUPERFAMILY SSF52518 407 591 2.12E-29 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold AMIS_13190 b755235ecafcf15afc96141a51c1d1dd 746 SUPERFAMILY SSF52518 40 356 4.3E-27 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold AMIS_13190 b755235ecafcf15afc96141a51c1d1dd 746 Pfam PF02779 Transketolase, pyrimidine binding domain 409 585 2.7E-10 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AMIS_13190 b755235ecafcf15afc96141a51c1d1dd 746 Gene3D G3DSA:3.40.50.970 4 386 4.4E-33 T 14-10-2018 AMIS_47260 92faa8b8d7aba125c6ca983ab200d61d 944 SUPERFAMILY SSF69318 378 667 5.23E-23 T 14-10-2018 AMIS_47260 92faa8b8d7aba125c6ca983ab200d61d 944 Gene3D G3DSA:3.60.10.10 44 332 6.3E-16 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AMIS_47260 92faa8b8d7aba125c6ca983ab200d61d 944 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 76 260 4.3E-6 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase AMIS_47260 92faa8b8d7aba125c6ca983ab200d61d 944 SUPERFAMILY SSF56219 43 267 1.3E-16 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AMIS_47260 92faa8b8d7aba125c6ca983ab200d61d 944 SUPERFAMILY SSF69318 584 839 7.06E-24 T 14-10-2018 AMIS_47260 92faa8b8d7aba125c6ca983ab200d61d 944 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 644 705 6.1E-8 T 14-10-2018 AMIS_47770 9d34020b8796e3aa696f61dfc78a64a9 222 Gene3D G3DSA:3.40.630.30 1 220 4.3E-64 T 14-10-2018 AMIS_47770 9d34020b8796e3aa696f61dfc78a64a9 222 SUPERFAMILY SSF55729 90 213 2.62E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_47770 9d34020b8796e3aa696f61dfc78a64a9 222 Pfam PF08445 FR47-like protein 127 208 2.3E-21 T 14-10-2018 IPR013653 FR47-like GO:0016747 AMIS_68660 cdca6b3fca5a9ec2e981b1a1e7b0a012 174 SMART SM00065 24 174 9.8E-4 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_68660 cdca6b3fca5a9ec2e981b1a1e7b0a012 174 Pfam PF13185 GAF domain 81 163 9.4E-8 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_68660 cdca6b3fca5a9ec2e981b1a1e7b0a012 174 Gene3D G3DSA:3.30.450.40 10 171 1.6E-18 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_68660 cdca6b3fca5a9ec2e981b1a1e7b0a012 174 SUPERFAMILY SSF55781 31 165 5.02E-18 T 14-10-2018 AMIS_53210 a5accf1df917fc14f1c2fa9506763e97 216 Gene3D G3DSA:3.40.50.2300 4 102 9.4E-16 T 14-10-2018 AMIS_53210 a5accf1df917fc14f1c2fa9506763e97 216 SMART SM00448 4 124 1.8E-9 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_53210 a5accf1df917fc14f1c2fa9506763e97 216 Pfam PF00072 Response regulator receiver domain 6 112 5.1E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_53210 a5accf1df917fc14f1c2fa9506763e97 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 197 9.2E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_53210 a5accf1df917fc14f1c2fa9506763e97 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 8.6E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_53210 a5accf1df917fc14f1c2fa9506763e97 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 8.6E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_53210 a5accf1df917fc14f1c2fa9506763e97 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 8.6E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_53210 a5accf1df917fc14f1c2fa9506763e97 216 SUPERFAMILY SSF46894 142 198 5.78E-13 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_53210 a5accf1df917fc14f1c2fa9506763e97 216 Gene3D G3DSA:1.10.10.10 106 216 1.9E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_53210 a5accf1df917fc14f1c2fa9506763e97 216 SUPERFAMILY SSF52172 1 140 2.7E-21 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_53210 a5accf1df917fc14f1c2fa9506763e97 216 SMART SM00421 150 213 5.9E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_64920 50959345efcffb82b5fcf04eb3e67099 575 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 140 152 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 AMIS_64920 50959345efcffb82b5fcf04eb3e67099 575 Pfam PF00069 Protein kinase domain 23 269 1.0E-54 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMIS_64920 50959345efcffb82b5fcf04eb3e67099 575 SMART SM00220 21 275 1.3E-79 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMIS_64920 50959345efcffb82b5fcf04eb3e67099 575 Gene3D G3DSA:3.30.200.20 10 100 5.3E-19 T 14-10-2018 AMIS_64920 50959345efcffb82b5fcf04eb3e67099 575 SUPERFAMILY SSF56112 18 275 4.07E-85 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMIS_64920 50959345efcffb82b5fcf04eb3e67099 575 Gene3D G3DSA:1.10.510.10 102 283 8.5E-56 T 14-10-2018 AMIS_64920 50959345efcffb82b5fcf04eb3e67099 575 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 27 50 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 AMIS_29370 5f169b03e1708bd7e8253e32ff2df908 219 SMART SM00448 1 114 1.1E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_29370 5f169b03e1708bd7e8253e32ff2df908 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 4.2E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_29370 5f169b03e1708bd7e8253e32ff2df908 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 4.2E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_29370 5f169b03e1708bd7e8253e32ff2df908 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 4.2E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_29370 5f169b03e1708bd7e8253e32ff2df908 219 SMART SM00421 150 207 3.0E-28 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_29370 5f169b03e1708bd7e8253e32ff2df908 219 SUPERFAMILY SSF52172 1 133 1.04E-31 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_29370 5f169b03e1708bd7e8253e32ff2df908 219 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 207 2.3E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_29370 5f169b03e1708bd7e8253e32ff2df908 219 SUPERFAMILY SSF46894 139 213 1.6E-23 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_29370 5f169b03e1708bd7e8253e32ff2df908 219 Pfam PF00072 Response regulator receiver domain 1 114 2.1E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_29370 5f169b03e1708bd7e8253e32ff2df908 219 Gene3D G3DSA:3.40.50.12740 1 213 3.6E-71 T 14-10-2018 AMIS_29370 5f169b03e1708bd7e8253e32ff2df908 219 ProSitePatterns PS00622 LuxR-type HTH domain signature. 167 194 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_24600 4adc56ea4c16c75a533b055cabf05d47 328 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_24600 4adc56ea4c16c75a533b055cabf05d47 328 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 297 1.1E-10 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMIS_24600 4adc56ea4c16c75a533b055cabf05d47 328 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 313 3.4E-15 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMIS_24600 4adc56ea4c16c75a533b055cabf05d47 328 Gene3D G3DSA:3.40.50.300 5 318 3.6E-88 T 14-10-2018 AMIS_24600 4adc56ea4c16c75a533b055cabf05d47 328 SMART SM00382 40 233 3.4E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_24600 4adc56ea4c16c75a533b055cabf05d47 328 Pfam PF00005 ABC transporter 31 184 2.0E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_24600 4adc56ea4c16c75a533b055cabf05d47 328 SUPERFAMILY SSF52540 24 248 3.8E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_29610 91819e3959e6bee022380757310d4f77 361 Gene3D G3DSA:3.30.390.10 2 124 8.8E-26 T 14-10-2018 IPR029017 Enolase-like, N-terminal AMIS_29610 91819e3959e6bee022380757310d4f77 361 Gene3D G3DSA:3.20.20.120 125 350 5.2E-77 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AMIS_29610 91819e3959e6bee022380757310d4f77 361 Pfam PF13378 Enolase C-terminal domain-like 156 353 1.5E-63 T 14-10-2018 IPR029065 Enolase C-terminal domain-like AMIS_29610 91819e3959e6bee022380757310d4f77 361 SMART SM00922 148 243 5.0E-28 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AMIS_29610 91819e3959e6bee022380757310d4f77 361 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 23 127 1.0E-16 T 14-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AMIS_29610 91819e3959e6bee022380757310d4f77 361 SUPERFAMILY SSF54826 4 131 2.73E-26 T 14-10-2018 AMIS_29610 91819e3959e6bee022380757310d4f77 361 SUPERFAMILY SSF51604 116 358 6.16E-72 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AMIS_14930 115bdde56bd73644e55660db6817bb7b 187 Pfam PF00583 Acetyltransferase (GNAT) family 55 153 3.8E-7 T 14-10-2018 IPR000182 GNAT domain AMIS_14930 115bdde56bd73644e55660db6817bb7b 187 Gene3D G3DSA:3.40.630.30 1 164 1.0E-14 T 14-10-2018 AMIS_14930 115bdde56bd73644e55660db6817bb7b 187 SUPERFAMILY SSF55729 6 160 2.84E-14 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_62910 bee09fd8b6cb48f88f9e7cbbfd4dd642 716 Pfam PF03144 Elongation factor Tu domain 2 338 414 1.0E-9 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AMIS_62910 bee09fd8b6cb48f88f9e7cbbfd4dd642 716 SUPERFAMILY SSF54980 624 712 3.31E-20 T 14-10-2018 IPR035647 EF-G domain III/V-like AMIS_62910 bee09fd8b6cb48f88f9e7cbbfd4dd642 716 Pfam PF03764 Elongation factor G, domain IV 503 619 3.9E-41 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AMIS_62910 bee09fd8b6cb48f88f9e7cbbfd4dd642 716 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 25 162 9.4E-17 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AMIS_62910 bee09fd8b6cb48f88f9e7cbbfd4dd642 716 Gene3D G3DSA:3.30.230.10 507 708 4.7E-76 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMIS_62910 bee09fd8b6cb48f88f9e7cbbfd4dd642 716 Pfam PF00679 Elongation factor G C-terminus 624 708 2.3E-20 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like AMIS_62910 bee09fd8b6cb48f88f9e7cbbfd4dd642 716 Gene3D G3DSA:3.30.70.870 429 501 3.5E-18 T 14-10-2018 AMIS_62910 bee09fd8b6cb48f88f9e7cbbfd4dd642 716 Gene3D G3DSA:3.30.70.240 627 697 4.7E-76 T 14-10-2018 AMIS_62910 bee09fd8b6cb48f88f9e7cbbfd4dd642 716 SMART SM00838 623 710 5.7E-23 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like AMIS_62910 bee09fd8b6cb48f88f9e7cbbfd4dd642 716 SUPERFAMILY SSF54980 428 504 3.27E-15 T 14-10-2018 IPR035647 EF-G domain III/V-like AMIS_62910 bee09fd8b6cb48f88f9e7cbbfd4dd642 716 Gene3D G3DSA:3.40.50.300 16 300 1.9E-57 T 14-10-2018 AMIS_62910 bee09fd8b6cb48f88f9e7cbbfd4dd642 716 SMART SM00889 503 621 1.3E-58 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AMIS_62910 bee09fd8b6cb48f88f9e7cbbfd4dd642 716 SUPERFAMILY SSF52540 20 296 2.51E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_62910 bee09fd8b6cb48f88f9e7cbbfd4dd642 716 Pfam PF00009 Elongation factor Tu GTP binding domain 23 293 1.6E-35 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_62910 bee09fd8b6cb48f88f9e7cbbfd4dd642 716 Pfam PF14492 Elongation Factor G, domain II 428 499 2.8E-21 T 14-10-2018 AMIS_62910 bee09fd8b6cb48f88f9e7cbbfd4dd642 716 SUPERFAMILY SSF54211 503 619 1.92E-36 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMIS_62910 bee09fd8b6cb48f88f9e7cbbfd4dd642 716 SUPERFAMILY SSF50447 263 425 2.12E-25 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AMIS_62910 bee09fd8b6cb48f88f9e7cbbfd4dd642 716 Gene3D G3DSA:2.40.30.10 318 428 2.5E-27 T 14-10-2018 AMIS_62910 bee09fd8b6cb48f88f9e7cbbfd4dd642 716 PRINTS PR00315 GTP-binding elongation factor signature 26 39 6.9E-6 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_62910 bee09fd8b6cb48f88f9e7cbbfd4dd642 716 PRINTS PR00315 GTP-binding elongation factor signature 108 119 6.9E-6 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_62910 bee09fd8b6cb48f88f9e7cbbfd4dd642 716 PRINTS PR00315 GTP-binding elongation factor signature 92 102 6.9E-6 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_80670 960bed92c7e6935aba98222956e74d38 338 Gene3D G3DSA:3.20.20.70 4 338 1.1E-88 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_80670 960bed92c7e6935aba98222956e74d38 338 Pfam PF04055 Radical SAM superfamily 21 182 8.5E-33 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMIS_80670 960bed92c7e6935aba98222956e74d38 338 SUPERFAMILY SSF102114 8 286 1.23E-69 T 14-10-2018 AMIS_80670 960bed92c7e6935aba98222956e74d38 338 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 22 33 - T 14-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMIS_80670 960bed92c7e6935aba98222956e74d38 338 Pfam PF06463 Molybdenum Cofactor Synthesis C 188 320 1.6E-32 T 14-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMIS_80670 960bed92c7e6935aba98222956e74d38 338 Pfam PF13353 4Fe-4S single cluster domain 23 126 1.2E-5 T 14-10-2018 AMIS_80670 960bed92c7e6935aba98222956e74d38 338 SMART SM00729 16 221 1.8E-7 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AMIS_80670 960bed92c7e6935aba98222956e74d38 338 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 7 338 4.1E-111 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMIS_80670 960bed92c7e6935aba98222956e74d38 338 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 7 338 39.735 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMIS_35910 33f8dc8432bb1178a6f72ae022878a94 579 Gene3D G3DSA:2.60.40.420 316 419 4.2E-15 T 14-10-2018 IPR008972 Cupredoxin AMIS_35910 33f8dc8432bb1178a6f72ae022878a94 579 SUPERFAMILY SSF49503 195 320 6.57E-33 T 14-10-2018 IPR008972 Cupredoxin AMIS_35910 33f8dc8432bb1178a6f72ae022878a94 579 SUPERFAMILY SSF49503 328 409 3.02E-13 T 14-10-2018 IPR008972 Cupredoxin AMIS_35910 33f8dc8432bb1178a6f72ae022878a94 579 Gene3D G3DSA:2.60.40.420 183 315 2.7E-35 T 14-10-2018 IPR008972 Cupredoxin AMIS_35910 33f8dc8432bb1178a6f72ae022878a94 579 Pfam PF07731 Multicopper oxidase 485 576 1.8E-24 T 14-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 AMIS_35910 33f8dc8432bb1178a6f72ae022878a94 579 SUPERFAMILY SSF49503 448 576 1.25E-28 T 14-10-2018 IPR008972 Cupredoxin AMIS_35910 33f8dc8432bb1178a6f72ae022878a94 579 Gene3D G3DSA:2.60.40.420 451 579 1.9E-29 T 14-10-2018 IPR008972 Cupredoxin AMIS_35910 33f8dc8432bb1178a6f72ae022878a94 579 ProSitePatterns PS00080 Multicopper oxidases signature 2. 561 572 - T 14-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 AMIS_35910 33f8dc8432bb1178a6f72ae022878a94 579 Pfam PF07732 Multicopper oxidase 209 317 5.3E-28 T 14-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 AMIS_69270 f4cb847f79b0babae45abdd73b7efbd7 485 Gene3D G3DSA:2.40.50.140 408 478 1.6E-6 T 14-10-2018 AMIS_69270 f4cb847f79b0babae45abdd73b7efbd7 485 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 9 471 1.5E-117 T 14-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 AMIS_69270 f4cb847f79b0babae45abdd73b7efbd7 485 Gene3D G3DSA:3.40.50.12160 8 134 1.8E-33 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily AMIS_69270 f4cb847f79b0babae45abdd73b7efbd7 485 Pfam PF00919 Uncharacterized protein family UPF0004 9 103 8.8E-29 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 AMIS_69270 f4cb847f79b0babae45abdd73b7efbd7 485 Gene3D G3DSA:3.80.30.20 173 407 5.1E-65 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe AMIS_69270 f4cb847f79b0babae45abdd73b7efbd7 485 SMART SM00729 175 390 2.3E-37 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AMIS_69270 f4cb847f79b0babae45abdd73b7efbd7 485 Pfam PF04055 Radical SAM superfamily 182 351 1.7E-20 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMIS_69270 f4cb847f79b0babae45abdd73b7efbd7 485 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 8 474 57.258 T 14-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 AMIS_69270 f4cb847f79b0babae45abdd73b7efbd7 485 SUPERFAMILY SSF102114 158 397 8.63E-43 T 14-10-2018 AMIS_69270 f4cb847f79b0babae45abdd73b7efbd7 485 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 163 429 7.0E-76 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 AMIS_69270 f4cb847f79b0babae45abdd73b7efbd7 485 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 179 199 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 AMIS_5870 ac3ba7c99316a94a55a68bf0943ea55d 122 Hamap MF_00422 Protein translocase subunit SecE [secE]. 64 119 13.367 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AMIS_5870 ac3ba7c99316a94a55a68bf0943ea55d 122 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 69 118 4.4E-20 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AMIS_5870 ac3ba7c99316a94a55a68bf0943ea55d 122 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 69 97 - T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AMIS_5870 ac3ba7c99316a94a55a68bf0943ea55d 122 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 69 120 1.5E-19 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 AMIS_5870 ac3ba7c99316a94a55a68bf0943ea55d 122 Gene3D G3DSA:1.20.5.1030 63 118 5.5E-18 T 14-10-2018 IPR038379 SecE superfamily AMIS_64810 ed7db9b27bb899e30d9f0d8097b36bc1 256 SUPERFAMILY SSF63380 4 119 3.41E-22 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AMIS_64810 ed7db9b27bb899e30d9f0d8097b36bc1 256 Gene3D G3DSA:3.40.50.80 121 255 4.0E-32 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMIS_64810 ed7db9b27bb899e30d9f0d8097b36bc1 256 SUPERFAMILY SSF52343 107 251 4.58E-34 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMIS_64810 ed7db9b27bb899e30d9f0d8097b36bc1 256 PRINTS PR00406 Cytochrome B5 reductase signature 128 147 3.0E-7 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 AMIS_64810 ed7db9b27bb899e30d9f0d8097b36bc1 256 PRINTS PR00406 Cytochrome B5 reductase signature 104 118 3.0E-7 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 AMIS_64810 ed7db9b27bb899e30d9f0d8097b36bc1 256 PRINTS PR00406 Cytochrome B5 reductase signature 61 68 3.0E-7 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 AMIS_64810 ed7db9b27bb899e30d9f0d8097b36bc1 256 PRINTS PR00406 Cytochrome B5 reductase signature 221 229 3.0E-7 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 AMIS_64810 ed7db9b27bb899e30d9f0d8097b36bc1 256 Pfam PF00175 Oxidoreductase NAD-binding domain 129 235 4.4E-13 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AMIS_64810 ed7db9b27bb899e30d9f0d8097b36bc1 256 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 91 100 4.3E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMIS_64810 ed7db9b27bb899e30d9f0d8097b36bc1 256 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 35 45 4.3E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMIS_64810 ed7db9b27bb899e30d9f0d8097b36bc1 256 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 128 147 4.3E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMIS_64810 ed7db9b27bb899e30d9f0d8097b36bc1 256 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 165 176 4.3E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMIS_64810 ed7db9b27bb899e30d9f0d8097b36bc1 256 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 55 62 4.3E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMIS_64810 ed7db9b27bb899e30d9f0d8097b36bc1 256 Pfam PF00970 Oxidoreductase FAD-binding domain 23 116 3.6E-9 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 AMIS_64810 ed7db9b27bb899e30d9f0d8097b36bc1 256 Gene3D G3DSA:2.40.30.10 2 114 2.0E-19 T 14-10-2018 AMIS_28280 342aa713b1aca93c908a9889c3c2d10f 414 SUPERFAMILY SSF49384 314 413 1.95E-29 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 AMIS_28280 342aa713b1aca93c908a9889c3c2d10f 414 Gene3D G3DSA:3.40.50.1820 21 261 3.7E-26 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_28280 342aa713b1aca93c908a9889c3c2d10f 414 SUPERFAMILY SSF53474 8 243 6.61E-19 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_28280 342aa713b1aca93c908a9889c3c2d10f 414 Gene3D G3DSA:2.60.40.290 312 414 5.2E-30 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 AMIS_28280 342aa713b1aca93c908a9889c3c2d10f 414 Pfam PF00326 Prolyl oligopeptidase family 116 158 5.2E-6 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AMIS_28280 342aa713b1aca93c908a9889c3c2d10f 414 SMART SM00637 318 411 3.7E-37 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 AMIS_28280 342aa713b1aca93c908a9889c3c2d10f 414 Pfam PF00553 Cellulose binding domain 318 413 1.4E-26 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 AMIS_10740 cbe83c35b304e122e0f5ea3cd68f1a6f 256 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 116 238 5.4E-22 T 14-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like AMIS_10740 cbe83c35b304e122e0f5ea3cd68f1a6f 256 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 53 68 6.7E-7 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_10740 cbe83c35b304e122e0f5ea3cd68f1a6f 256 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 5 20 6.7E-7 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_10740 cbe83c35b304e122e0f5ea3cd68f1a6f 256 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 38 53 6.7E-7 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_10740 cbe83c35b304e122e0f5ea3cd68f1a6f 256 SMART SM00418 3 78 7.5E-17 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_10740 cbe83c35b304e122e0f5ea3cd68f1a6f 256 Pfam PF12840 Helix-turn-helix domain 2 62 1.6E-16 T 14-10-2018 AMIS_10740 cbe83c35b304e122e0f5ea3cd68f1a6f 256 SUPERFAMILY SSF46785 1 95 1.6E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_10740 cbe83c35b304e122e0f5ea3cd68f1a6f 256 Gene3D G3DSA:1.10.10.10 1 102 4.0E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_10740 cbe83c35b304e122e0f5ea3cd68f1a6f 256 SUPERFAMILY SSF55961 106 245 8.25E-34 T 14-10-2018 AMIS_10740 cbe83c35b304e122e0f5ea3cd68f1a6f 256 Gene3D G3DSA:3.30.530.20 105 240 1.5E-33 T 14-10-2018 IPR023393 START-like domain superfamily AMIS_8950 414950ac5320ba4ee8cd3e25ddc07a9a 191 Pfam PF14273 Domain of unknown function (DUF4360) 33 179 3.9E-20 T 14-10-2018 IPR025649 Protein of unknown function DUF4360 AMIS_77040 4ad6f003056bfda9674eb57a2add2546 574 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 397 520 9.8E-32 T 14-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMIS_77040 4ad6f003056bfda9674eb57a2add2546 574 Pfam PF01266 FAD dependent oxidoreductase 7 347 8.2E-52 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AMIS_77040 4ad6f003056bfda9674eb57a2add2546 574 Gene3D G3DSA:3.50.50.60 7 383 7.4E-122 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_77040 4ad6f003056bfda9674eb57a2add2546 574 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 6 18 6.0E-33 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMIS_77040 4ad6f003056bfda9674eb57a2add2546 574 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 35 47 6.0E-33 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMIS_77040 4ad6f003056bfda9674eb57a2add2546 574 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 334 340 6.0E-33 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMIS_77040 4ad6f003056bfda9674eb57a2add2546 574 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 364 376 6.0E-33 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMIS_77040 4ad6f003056bfda9674eb57a2add2546 574 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 19 29 6.0E-33 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMIS_77040 4ad6f003056bfda9674eb57a2add2546 574 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 81 93 6.0E-33 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMIS_77040 4ad6f003056bfda9674eb57a2add2546 574 SUPERFAMILY SSF51905 5 343 3.11E-39 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_77040 4ad6f003056bfda9674eb57a2add2546 574 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 369 379 - T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMIS_77040 4ad6f003056bfda9674eb57a2add2546 574 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 11 28 - T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMIS_77040 4ad6f003056bfda9674eb57a2add2546 574 Gene3D G3DSA:1.10.8.870 408 548 1.0E-31 T 14-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMIS_77040 4ad6f003056bfda9674eb57a2add2546 574 Gene3D G3DSA:3.30.9.10 85 341 7.4E-122 T 14-10-2018 AMIS_7680 f0f5ed0bf6f31de1c6bfeccfc9e07ed6 329 SUPERFAMILY SSF52540 25 293 4.7E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_7680 f0f5ed0bf6f31de1c6bfeccfc9e07ed6 329 Gene3D G3DSA:3.40.50.300 25 191 2.2E-44 T 14-10-2018 AMIS_7680 f0f5ed0bf6f31de1c6bfeccfc9e07ed6 329 PIRSF PIRSF002849 8 319 5.9E-129 T 14-10-2018 AMIS_7680 f0f5ed0bf6f31de1c6bfeccfc9e07ed6 329 Gene3D G3DSA:1.10.8.300 206 314 2.0E-31 T 14-10-2018 AMIS_7680 f0f5ed0bf6f31de1c6bfeccfc9e07ed6 329 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 44 174 7.9E-63 T 14-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 AMIS_66020 007e976bd9e3928523baa7b660aed384 538 Pfam PF00027 Cyclic nucleotide-binding domain 48 136 7.9E-11 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain AMIS_66020 007e976bd9e3928523baa7b660aed384 538 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 429 533 2.5E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_66020 007e976bd9e3928523baa7b660aed384 538 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 512 8.8E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_66020 007e976bd9e3928523baa7b660aed384 538 PRINTS PR00344 Bacterial sensor protein C-terminal signature 518 531 8.8E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_66020 007e976bd9e3928523baa7b660aed384 538 PRINTS PR00344 Bacterial sensor protein C-terminal signature 481 491 8.8E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_66020 007e976bd9e3928523baa7b660aed384 538 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 477 8.8E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_66020 007e976bd9e3928523baa7b660aed384 538 SUPERFAMILY SSF55874 372 532 3.8E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_66020 007e976bd9e3928523baa7b660aed384 538 Gene3D G3DSA:3.30.565.10 386 537 9.3E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_66020 007e976bd9e3928523baa7b660aed384 538 SMART SM00100 28 151 2.1E-10 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain AMIS_66020 007e976bd9e3928523baa7b660aed384 538 Gene3D G3DSA:1.10.287.130 164 239 3.5E-5 T 14-10-2018 AMIS_66020 007e976bd9e3928523baa7b660aed384 538 SMART SM00387 426 534 8.6E-32 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_66020 007e976bd9e3928523baa7b660aed384 538 Gene3D G3DSA:2.60.120.10 16 163 3.6E-20 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMIS_66020 007e976bd9e3928523baa7b660aed384 538 SUPERFAMILY SSF51206 21 155 4.84E-20 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like AMIS_62210 54734088e2b90bd67ffafcaa85847b29 185 Gene3D G3DSA:2.40.50.140 128 185 1.3E-25 T 14-10-2018 AMIS_62210 54734088e2b90bd67ffafcaa85847b29 185 SUPERFAMILY SSF50104 1 63 7.22E-20 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily AMIS_62210 54734088e2b90bd67ffafcaa85847b29 185 PIRSF PIRSF005901 1 185 5.6E-67 T 14-10-2018 IPR020599 Translation elongation factor P/YeiP AMIS_62210 54734088e2b90bd67ffafcaa85847b29 185 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 60 3.3E-25 T 14-10-2018 IPR013185 Translation elongation factor, KOW-like AMIS_62210 54734088e2b90bd67ffafcaa85847b29 185 Pfam PF01132 Elongation factor P (EF-P) OB domain 68 121 1.1E-21 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 AMIS_62210 54734088e2b90bd67ffafcaa85847b29 185 Gene3D G3DSA:2.30.30.30 1 62 1.6E-26 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 AMIS_62210 54734088e2b90bd67ffafcaa85847b29 185 SMART SM00841 129 184 6.3E-31 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 AMIS_62210 54734088e2b90bd67ffafcaa85847b29 185 SUPERFAMILY SSF50249 129 184 3.77E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMIS_62210 54734088e2b90bd67ffafcaa85847b29 185 Hamap MF_00141 Elongation factor P [efp]. 1 185 49.198 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 AMIS_62210 54734088e2b90bd67ffafcaa85847b29 185 ProSitePatterns PS01275 Elongation factor P signature. 150 169 - T 14-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site AMIS_62210 54734088e2b90bd67ffafcaa85847b29 185 SMART SM01185 67 121 6.6E-27 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 AMIS_62210 54734088e2b90bd67ffafcaa85847b29 185 TIGRFAM TIGR00038 efp: translation elongation factor P 3 184 1.5E-75 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 AMIS_62210 54734088e2b90bd67ffafcaa85847b29 185 SUPERFAMILY SSF50249 65 127 1.41E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMIS_62210 54734088e2b90bd67ffafcaa85847b29 185 Pfam PF09285 Elongation factor P, C-terminal 130 184 3.2E-26 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 AMIS_62210 54734088e2b90bd67ffafcaa85847b29 185 Gene3D G3DSA:2.40.50.140 64 127 5.4E-24 T 14-10-2018 AMIS_76560 6af089d01528d2662054c97c4637cd48 336 Pfam PF01584 CheW-like domain 194 315 3.1E-15 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMIS_76560 6af089d01528d2662054c97c4637cd48 336 Pfam PF01584 CheW-like domain 39 168 2.6E-23 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMIS_76560 6af089d01528d2662054c97c4637cd48 336 Gene3D G3DSA:2.30.30.40 34 162 6.5E-36 T 14-10-2018 AMIS_76560 6af089d01528d2662054c97c4637cd48 336 SMART SM00260 27 166 2.1E-30 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMIS_76560 6af089d01528d2662054c97c4637cd48 336 SMART SM00260 190 317 7.3E-7 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMIS_76560 6af089d01528d2662054c97c4637cd48 336 SUPERFAMILY SSF50341 193 314 2.62E-17 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 AMIS_76560 6af089d01528d2662054c97c4637cd48 336 SUPERFAMILY SSF50341 34 165 4.58E-29 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 AMIS_76560 6af089d01528d2662054c97c4637cd48 336 Gene3D G3DSA:2.40.50.180 58 121 6.5E-36 T 14-10-2018 AMIS_76560 6af089d01528d2662054c97c4637cd48 336 Gene3D G3DSA:2.40.50.180 215 275 2.9E-11 T 14-10-2018 AMIS_76560 6af089d01528d2662054c97c4637cd48 336 SUPERFAMILY SSF55874 1 37 8.76E-6 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_30520 8c8b71944214139c23c3c5d43583de54 126 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 36 56 1.4E-9 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_30520 8c8b71944214139c23c3c5d43583de54 126 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.4E-9 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_30520 8c8b71944214139c23c3c5d43583de54 126 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 1.4E-9 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_30520 8c8b71944214139c23c3c5d43583de54 126 SMART SM00422 1 69 1.5E-13 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_30520 8c8b71944214139c23c3c5d43583de54 126 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_30520 8c8b71944214139c23c3c5d43583de54 126 Pfam PF09278 MerR, DNA binding 44 105 3.1E-7 T 14-10-2018 IPR015358 Transcription regulator MerR, DNA binding AMIS_30520 8c8b71944214139c23c3c5d43583de54 126 SUPERFAMILY SSF46955 2 112 4.4E-27 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily AMIS_30520 8c8b71944214139c23c3c5d43583de54 126 Pfam PF00376 MerR family regulatory protein 2 38 1.3E-14 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_30520 8c8b71944214139c23c3c5d43583de54 126 Gene3D G3DSA:1.10.1660.10 1 119 8.8E-30 T 14-10-2018 AMIS_4730 f4405430b63816de1da6e7720b740adb 197 SUPERFAMILY SSF46689 9 75 8.98E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_4730 f4405430b63816de1da6e7720b740adb 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 60 2.3E-16 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_4730 f4405430b63816de1da6e7720b740adb 197 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 56 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMIS_4730 f4405430b63816de1da6e7720b740adb 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 9.7E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_4730 f4405430b63816de1da6e7720b740adb 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 9.7E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_4730 f4405430b63816de1da6e7720b740adb 197 Gene3D G3DSA:1.10.357.10 4 197 4.1E-43 T 14-10-2018 AMIS_50950 23ba41ac3c8a99a176cd298e0bbf8ca4 670 SUPERFAMILY SSF55785 34 138 1.74E-9 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_50950 23ba41ac3c8a99a176cd298e0bbf8ca4 670 SUPERFAMILY SSF52091 575 668 3.73E-9 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_50950 23ba41ac3c8a99a176cd298e0bbf8ca4 670 Gene3D G3DSA:3.30.565.10 418 556 1.4E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_50950 23ba41ac3c8a99a176cd298e0bbf8ca4 670 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 215 416 3.8E-41 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_50950 23ba41ac3c8a99a176cd298e0bbf8ca4 670 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 66 152 7.6E-6 T 14-10-2018 IPR000014 PAS domain AMIS_50950 23ba41ac3c8a99a176cd298e0bbf8ca4 670 SUPERFAMILY SSF55874 451 545 2.68E-9 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_50950 23ba41ac3c8a99a176cd298e0bbf8ca4 670 Gene3D G3DSA:3.30.750.24 568 670 2.0E-15 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_50950 23ba41ac3c8a99a176cd298e0bbf8ca4 670 Gene3D G3DSA:3.60.40.10 181 417 7.6E-54 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_50950 23ba41ac3c8a99a176cd298e0bbf8ca4 670 Pfam PF13466 STAS domain 586 666 9.0E-8 T 14-10-2018 IPR002645 STAS domain AMIS_50950 23ba41ac3c8a99a176cd298e0bbf8ca4 670 Pfam PF08448 PAS fold 34 148 2.1E-14 T 14-10-2018 IPR013656 PAS fold-4 AMIS_50950 23ba41ac3c8a99a176cd298e0bbf8ca4 670 SUPERFAMILY SSF81606 205 415 9.15E-9 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_50950 23ba41ac3c8a99a176cd298e0bbf8ca4 670 Gene3D G3DSA:3.30.450.20 30 176 8.6E-29 T 14-10-2018 AMIS_50950 23ba41ac3c8a99a176cd298e0bbf8ca4 670 SMART SM00331 186 416 9.3E-37 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_50950 23ba41ac3c8a99a176cd298e0bbf8ca4 670 Pfam PF13581 Histidine kinase-like ATPase domain 427 541 7.1E-13 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_14520 25da47d4dc2b362784ef8a8db364b544 216 Gene3D G3DSA:1.10.357.10 3 193 6.9E-57 T 14-10-2018 AMIS_14520 25da47d4dc2b362784ef8a8db364b544 216 SUPERFAMILY SSF46689 6 84 5.99E-21 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_14520 25da47d4dc2b362784ef8a8db364b544 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 3.8E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_14520 25da47d4dc2b362784ef8a8db364b544 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 3.8E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_14520 25da47d4dc2b362784ef8a8db364b544 216 SUPERFAMILY SSF48498 83 187 9.24E-17 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_14520 25da47d4dc2b362784ef8a8db364b544 216 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 64 1.2E-16 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_14520 25da47d4dc2b362784ef8a8db364b544 216 ProSitePatterns PS01081 TetR-type HTH domain signature. 31 61 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMIS_27480 437b9176661fa9d94c7bb331f95f54a0 214 SUPERFAMILY SSF53597 4 212 2.8E-23 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AMIS_27480 437b9176661fa9d94c7bb331f95f54a0 214 Gene3D G3DSA:3.40.430.10 1 214 1.8E-39 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AMIS_27480 437b9176661fa9d94c7bb331f95f54a0 214 Pfam PF01872 RibD C-terminal domain 4 191 3.9E-18 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 AMIS_15530 2bdd50c5c6535c33c0f447115388cfca 484 SMART SM00345 32 91 6.9E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_15530 2bdd50c5c6535c33c0f447115388cfca 484 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 65 1.5E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_15530 2bdd50c5c6535c33c0f447115388cfca 484 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 65 81 1.5E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_15530 2bdd50c5c6535c33c0f447115388cfca 484 Gene3D G3DSA:3.90.1150.10 131 464 4.9E-73 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMIS_15530 2bdd50c5c6535c33c0f447115388cfca 484 Pfam PF00392 Bacterial regulatory proteins, gntR family 29 88 2.1E-12 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_15530 2bdd50c5c6535c33c0f447115388cfca 484 SUPERFAMILY SSF46785 24 94 1.58E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_15530 2bdd50c5c6535c33c0f447115388cfca 484 Gene3D G3DSA:1.10.10.10 21 92 5.3E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_15530 2bdd50c5c6535c33c0f447115388cfca 484 Gene3D G3DSA:3.40.640.10 146 364 4.9E-73 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_15530 2bdd50c5c6535c33c0f447115388cfca 484 Pfam PF00155 Aminotransferase class I and II 145 462 8.8E-26 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMIS_15530 2bdd50c5c6535c33c0f447115388cfca 484 SUPERFAMILY SSF53383 110 466 1.28E-74 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_18730 5600fb9c04b10d74a391cead4fc2f702 1680 Gene3D G3DSA:3.30.450.40 1387 1518 2.6E-5 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_18730 5600fb9c04b10d74a391cead4fc2f702 1680 SUPERFAMILY SSF48452 674 1067 2.53E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_18730 5600fb9c04b10d74a391cead4fc2f702 1680 Gene3D G3DSA:3.30.450.40 1202 1375 4.6E-27 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_18730 5600fb9c04b10d74a391cead4fc2f702 1680 SMART SM00065 1230 1373 3.2E-12 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_18730 5600fb9c04b10d74a391cead4fc2f702 1680 Pfam PF00990 Diguanylate cyclase, GGDEF domain 1520 1676 2.2E-44 T 14-10-2018 IPR000160 GGDEF domain AMIS_18730 5600fb9c04b10d74a391cead4fc2f702 1680 SUPERFAMILY SSF55073 1525 1678 2.04E-46 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_18730 5600fb9c04b10d74a391cead4fc2f702 1680 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 125 137 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 AMIS_18730 5600fb9c04b10d74a391cead4fc2f702 1680 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 1517 1678 3.9E-50 T 14-10-2018 IPR000160 GGDEF domain AMIS_18730 5600fb9c04b10d74a391cead4fc2f702 1680 SUPERFAMILY SSF52540 279 516 6.57E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_18730 5600fb9c04b10d74a391cead4fc2f702 1680 Pfam PF13191 AAA ATPase domain 279 447 2.9E-16 T 14-10-2018 AMIS_18730 5600fb9c04b10d74a391cead4fc2f702 1680 SUPERFAMILY SSF48452 936 1179 1.09E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_18730 5600fb9c04b10d74a391cead4fc2f702 1680 Gene3D G3DSA:1.10.510.10 5 261 1.3E-50 T 14-10-2018 AMIS_18730 5600fb9c04b10d74a391cead4fc2f702 1680 Pfam PF13185 GAF domain 1229 1364 9.5E-14 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_18730 5600fb9c04b10d74a391cead4fc2f702 1680 Gene3D G3DSA:3.30.70.270 1519 1680 1.7E-56 T 14-10-2018 AMIS_18730 5600fb9c04b10d74a391cead4fc2f702 1680 SUPERFAMILY SSF55781 1385 1521 2.42E-6 T 14-10-2018 AMIS_18730 5600fb9c04b10d74a391cead4fc2f702 1680 SMART SM00267 1509 1680 1.7E-59 T 14-10-2018 IPR000160 GGDEF domain AMIS_18730 5600fb9c04b10d74a391cead4fc2f702 1680 SUPERFAMILY SSF56112 8 263 3.29E-57 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMIS_18730 5600fb9c04b10d74a391cead4fc2f702 1680 Pfam PF00069 Protein kinase domain 11 251 1.8E-32 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMIS_18730 5600fb9c04b10d74a391cead4fc2f702 1680 SUPERFAMILY SSF55781 1211 1390 2.18E-25 T 14-10-2018 AMIS_18730 5600fb9c04b10d74a391cead4fc2f702 1680 SMART SM00220 9 262 3.8E-41 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMIS_18730 5600fb9c04b10d74a391cead4fc2f702 1680 Gene3D G3DSA:1.25.40.10 575 774 1.6E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_31300 2893318cd6d987040ba9a60d17390213 1144 SMART SM00320 797 837 12.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_31300 2893318cd6d987040ba9a60d17390213 1144 SMART SM00320 752 791 0.0025 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_31300 2893318cd6d987040ba9a60d17390213 1144 SMART SM00320 560 610 7.9 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_31300 2893318cd6d987040ba9a60d17390213 1144 SMART SM00320 1021 1059 0.018 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_31300 2893318cd6d987040ba9a60d17390213 1144 SMART SM00320 703 740 180.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_31300 2893318cd6d987040ba9a60d17390213 1144 SMART SM00320 616 649 9.4 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_31300 2893318cd6d987040ba9a60d17390213 1144 SMART SM00320 1065 1103 0.76 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_31300 2893318cd6d987040ba9a60d17390213 1144 SMART SM00320 974 1015 74.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_31300 2893318cd6d987040ba9a60d17390213 1144 SMART SM00320 933 970 120.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_31300 2893318cd6d987040ba9a60d17390213 1144 SMART SM00320 845 882 10.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_31300 2893318cd6d987040ba9a60d17390213 1144 SMART SM00320 487 521 4.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_31300 2893318cd6d987040ba9a60d17390213 1144 SMART SM00320 888 927 0.67 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_31300 2893318cd6d987040ba9a60d17390213 1144 SMART SM00255 2 146 5.3E-4 T 14-10-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 AMIS_31300 2893318cd6d987040ba9a60d17390213 1144 Pfam PF13676 TIR domain 6 113 2.6E-9 T 14-10-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 AMIS_31300 2893318cd6d987040ba9a60d17390213 1144 Pfam PF00400 WD domain, G-beta repeat 1081 1103 0.066 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_31300 2893318cd6d987040ba9a60d17390213 1144 SUPERFAMILY SSF50998 492 932 5.49E-37 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AMIS_31300 2893318cd6d987040ba9a60d17390213 1144 Gene3D G3DSA:3.40.50.10140 1 118 8.1E-14 T 14-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily AMIS_31300 2893318cd6d987040ba9a60d17390213 1144 Gene3D G3DSA:2.130.10.10 964 1125 8.1E-20 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_31300 2893318cd6d987040ba9a60d17390213 1144 Gene3D G3DSA:2.130.10.10 465 672 2.7E-21 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_31300 2893318cd6d987040ba9a60d17390213 1144 Gene3D G3DSA:2.130.10.10 805 963 1.3E-23 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_31300 2893318cd6d987040ba9a60d17390213 1144 SUPERFAMILY SSF50998 809 1106 1.49E-38 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AMIS_31300 2893318cd6d987040ba9a60d17390213 1144 SUPERFAMILY SSF52200 3 103 2.22E-8 T 14-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily AMIS_31300 2893318cd6d987040ba9a60d17390213 1144 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 508 522 - T 14-10-2018 IPR019775 WD40 repeat, conserved site AMIS_31300 2893318cd6d987040ba9a60d17390213 1144 Gene3D G3DSA:2.130.10.10 673 803 2.1E-11 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_48210 0a3bcc1de2c5a80a7d169bd9bfbb0454 604 Pfam PF05425 Copper resistance protein D 381 476 3.1E-15 T 14-10-2018 IPR008457 Copper resistance protein D GO:0016021 AMIS_48210 0a3bcc1de2c5a80a7d169bd9bfbb0454 604 Pfam PF04234 CopC domain 29 122 2.6E-20 T 14-10-2018 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 AMIS_48210 0a3bcc1de2c5a80a7d169bd9bfbb0454 604 Gene3D G3DSA:2.60.40.1220 29 128 2.7E-19 T 14-10-2018 AMIS_48210 0a3bcc1de2c5a80a7d169bd9bfbb0454 604 SUPERFAMILY SSF81296 28 123 3.57E-18 T 14-10-2018 IPR014756 Immunoglobulin E-set AMIS_17650 86e0ac658057de423514c23afd5a9ac2 387 PRINTS PR00723 Subtilisin serine protease family (S8) signature 141 160 3.7E-18 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMIS_17650 86e0ac658057de423514c23afd5a9ac2 387 PRINTS PR00723 Subtilisin serine protease family (S8) signature 177 190 3.7E-18 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMIS_17650 86e0ac658057de423514c23afd5a9ac2 387 PRINTS PR00723 Subtilisin serine protease family (S8) signature 330 346 3.7E-18 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMIS_17650 86e0ac658057de423514c23afd5a9ac2 387 SUPERFAMILY SSF52743 113 380 2.09E-74 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AMIS_17650 86e0ac658057de423514c23afd5a9ac2 387 Gene3D G3DSA:3.30.70.80 39 109 1.1E-16 T 14-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 AMIS_17650 86e0ac658057de423514c23afd5a9ac2 387 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 146 157 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site AMIS_17650 86e0ac658057de423514c23afd5a9ac2 387 Gene3D G3DSA:3.40.50.200 112 387 5.7E-88 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AMIS_17650 86e0ac658057de423514c23afd5a9ac2 387 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 181 191 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site AMIS_17650 86e0ac658057de423514c23afd5a9ac2 387 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 331 341 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site AMIS_17650 86e0ac658057de423514c23afd5a9ac2 387 Pfam PF05922 Peptidase inhibitor I9 61 111 4.3E-8 T 14-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 AMIS_17650 86e0ac658057de423514c23afd5a9ac2 387 Pfam PF00082 Subtilase family 173 369 6.7E-35 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AMIS_17650 86e0ac658057de423514c23afd5a9ac2 387 SUPERFAMILY SSF54897 47 110 1.13E-11 T 14-10-2018 AMIS_54510 fa3c72a55e017c2e9faa40379a9a0156 267 Pfam PF00480 ROK family 4 159 1.8E-18 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AMIS_54510 fa3c72a55e017c2e9faa40379a9a0156 267 SUPERFAMILY SSF53067 1 244 3.23E-36 T 14-10-2018 AMIS_54510 fa3c72a55e017c2e9faa40379a9a0156 267 Gene3D G3DSA:3.30.420.40 1 104 1.8E-25 T 14-10-2018 AMIS_54510 fa3c72a55e017c2e9faa40379a9a0156 267 Gene3D G3DSA:3.30.420.40 105 246 2.2E-35 T 14-10-2018 AMIS_67060 291419efaa4c9fb61ee97debb26c007a 678 SUPERFAMILY SSF53335 177 378 1.79E-13 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_67060 291419efaa4c9fb61ee97debb26c007a 678 Gene3D G3DSA:3.40.50.150 175 387 3.8E-10 T 14-10-2018 AMIS_60350 730151cd9e494456e09b8b882078db1c 442 SUPERFAMILY SSF52540 134 431 6.93E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_60350 730151cd9e494456e09b8b882078db1c 442 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 349 427 2.3E-22 T 14-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like AMIS_60350 730151cd9e494456e09b8b882078db1c 442 Pfam PF01926 50S ribosome-binding GTPase 175 293 3.3E-20 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 AMIS_60350 730151cd9e494456e09b8b882078db1c 442 Pfam PF01926 50S ribosome-binding GTPase 2 116 1.4E-25 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 AMIS_60350 730151cd9e494456e09b8b882078db1c 442 PIRSF PIRSF006485 1 433 2.8E-152 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 AMIS_60350 730151cd9e494456e09b8b882078db1c 442 Gene3D G3DSA:3.40.50.300 173 344 5.7E-38 T 14-10-2018 AMIS_60350 730151cd9e494456e09b8b882078db1c 442 SMART SM00382 1 162 11.0 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_60350 730151cd9e494456e09b8b882078db1c 442 SMART SM00382 172 314 0.001 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_60350 730151cd9e494456e09b8b882078db1c 442 Hamap MF_00195 GTPase Der [der]. 1 430 32.737 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 AMIS_60350 730151cd9e494456e09b8b882078db1c 442 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 2 149 2.6E-22 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AMIS_60350 730151cd9e494456e09b8b882078db1c 442 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 174 336 2.6E-21 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AMIS_60350 730151cd9e494456e09b8b882078db1c 442 Gene3D G3DSA:3.30.300.20 349 430 1.9E-23 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta AMIS_60350 730151cd9e494456e09b8b882078db1c 442 Gene3D G3DSA:3.40.50.300 1 158 1.2E-42 T 14-10-2018 AMIS_60350 730151cd9e494456e09b8b882078db1c 442 SUPERFAMILY SSF52540 2 164 1.63E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_60350 730151cd9e494456e09b8b882078db1c 442 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 176 196 2.4E-7 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 AMIS_60350 730151cd9e494456e09b8b882078db1c 442 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 225 240 2.4E-7 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 AMIS_60350 730151cd9e494456e09b8b882078db1c 442 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 1 427 1.8E-148 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 AMIS_7150 868411a299141fef92334187b5d2dcd3 134 SUPERFAMILY SSF52242 3 129 1.96E-49 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 AMIS_7150 868411a299141fef92334187b5d2dcd3 134 Gene3D G3DSA:3.40.50.280 1 133 4.3E-59 T 14-10-2018 AMIS_7150 868411a299141fef92334187b5d2dcd3 134 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 4 130 1.6E-49 T 14-10-2018 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 AMIS_7150 868411a299141fef92334187b5d2dcd3 134 Pfam PF02310 B12 binding domain 5 115 2.4E-24 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 AMIS_19350 91ab9d16790f2d5c581196a21688adf3 133 Gene3D G3DSA:3.30.1330.40 5 133 1.7E-26 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AMIS_19350 91ab9d16790f2d5c581196a21688adf3 133 Pfam PF01042 Endoribonuclease L-PSP 28 132 4.1E-19 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 AMIS_19350 91ab9d16790f2d5c581196a21688adf3 133 SUPERFAMILY SSF55298 7 132 4.08E-25 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AMIS_22370 c0c26c810b0052ea1e99fc960f1b684b 428 SMART SM00530 4 60 1.4E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMIS_22370 c0c26c810b0052ea1e99fc960f1b684b 428 SUPERFAMILY SSF52540 81 345 4.79E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_22370 c0c26c810b0052ea1e99fc960f1b684b 428 PRINTS PR00364 Disease resistance protein signature 116 131 4.5E-11 T 14-10-2018 AMIS_22370 c0c26c810b0052ea1e99fc960f1b684b 428 PRINTS PR00364 Disease resistance protein signature 278 292 4.5E-11 T 14-10-2018 AMIS_22370 c0c26c810b0052ea1e99fc960f1b684b 428 PRINTS PR00364 Disease resistance protein signature 193 207 4.5E-11 T 14-10-2018 AMIS_22370 c0c26c810b0052ea1e99fc960f1b684b 428 Gene3D G3DSA:1.10.260.40 1 62 2.7E-14 T 14-10-2018 AMIS_22370 c0c26c810b0052ea1e99fc960f1b684b 428 SUPERFAMILY SSF47413 1 59 6.17E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_22370 c0c26c810b0052ea1e99fc960f1b684b 428 Pfam PF00931 NB-ARC domain 115 351 1.8E-9 T 14-10-2018 IPR002182 NB-ARC GO:0043531 Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-6798695|Reactome: R-HSA-6803207|Reactome: R-HSA-8953750 AMIS_22370 c0c26c810b0052ea1e99fc960f1b684b 428 Gene3D G3DSA:3.40.50.300 80 234 6.1E-24 T 14-10-2018 AMIS_22370 c0c26c810b0052ea1e99fc960f1b684b 428 Pfam PF13560 Helix-turn-helix domain 1 63 1.8E-12 T 14-10-2018 AMIS_80 97342693152ed435aac54696cdda2051 650 SMART SM00433 37 643 0.0 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AMIS_80 97342693152ed435aac54696cdda2051 650 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 8 650 4.8E-286 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMIS_80 97342693152ed435aac54696cdda2051 650 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 5 650 88.382 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMIS_80 97342693152ed435aac54696cdda2051 650 SMART SM00387 33 176 2.3E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_80 97342693152ed435aac54696cdda2051 650 Gene3D G3DSA:3.30.565.10 4 221 1.5E-83 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_80 97342693152ed435aac54696cdda2051 650 Pfam PF00204 DNA gyrase B 229 399 7.7E-58 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AMIS_80 97342693152ed435aac54696cdda2051 650 SUPERFAMILY SSF56719 403 645 6.28E-85 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AMIS_80 97342693152ed435aac54696cdda2051 650 ProSitePatterns PS00177 DNA topoisomerase II signature. 431 439 - T 14-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AMIS_80 97342693152ed435aac54696cdda2051 650 Gene3D G3DSA:3.30.230.10 227 406 1.3E-66 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMIS_80 97342693152ed435aac54696cdda2051 650 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 581 639 3.1E-27 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMIS_80 97342693152ed435aac54696cdda2051 650 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 35 174 6.8E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_80 97342693152ed435aac54696cdda2051 650 SUPERFAMILY SSF54211 229 400 4.36E-52 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMIS_80 97342693152ed435aac54696cdda2051 650 Pfam PF01751 Toprim domain 428 538 8.8E-17 T 14-10-2018 IPR006171 TOPRIM domain AMIS_80 97342693152ed435aac54696cdda2051 650 Gene3D G3DSA:3.40.50.670 407 650 4.6E-99 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AMIS_80 97342693152ed435aac54696cdda2051 650 PRINTS PR00418 DNA topoisomerase II family signature 37 52 5.6E-68 T 14-10-2018 AMIS_80 97342693152ed435aac54696cdda2051 650 PRINTS PR00418 DNA topoisomerase II family signature 72 85 5.6E-68 T 14-10-2018 AMIS_80 97342693152ed435aac54696cdda2051 650 PRINTS PR00418 DNA topoisomerase II family signature 495 511 5.6E-68 T 14-10-2018 AMIS_80 97342693152ed435aac54696cdda2051 650 PRINTS PR00418 DNA topoisomerase II family signature 278 291 5.6E-68 T 14-10-2018 AMIS_80 97342693152ed435aac54696cdda2051 650 PRINTS PR00418 DNA topoisomerase II family signature 429 443 5.6E-68 T 14-10-2018 AMIS_80 97342693152ed435aac54696cdda2051 650 PRINTS PR00418 DNA topoisomerase II family signature 115 129 5.6E-68 T 14-10-2018 AMIS_80 97342693152ed435aac54696cdda2051 650 PRINTS PR00418 DNA topoisomerase II family signature 533 545 5.6E-68 T 14-10-2018 AMIS_80 97342693152ed435aac54696cdda2051 650 PRINTS PR00418 DNA topoisomerase II family signature 513 530 5.6E-68 T 14-10-2018 AMIS_80 97342693152ed435aac54696cdda2051 650 PRINTS PR00418 DNA topoisomerase II family signature 582 598 5.6E-68 T 14-10-2018 AMIS_80 97342693152ed435aac54696cdda2051 650 PRINTS PR01159 DNA gyrase subunit B signature 196 209 7.7E-75 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMIS_80 97342693152ed435aac54696cdda2051 650 PRINTS PR01159 DNA gyrase subunit B signature 228 250 7.7E-75 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMIS_80 97342693152ed435aac54696cdda2051 650 PRINTS PR01159 DNA gyrase subunit B signature 181 196 7.7E-75 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMIS_80 97342693152ed435aac54696cdda2051 650 PRINTS PR01159 DNA gyrase subunit B signature 321 337 7.7E-75 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMIS_80 97342693152ed435aac54696cdda2051 650 PRINTS PR01159 DNA gyrase subunit B signature 479 488 7.7E-75 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMIS_80 97342693152ed435aac54696cdda2051 650 PRINTS PR01159 DNA gyrase subunit B signature 252 270 7.7E-75 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMIS_80 97342693152ed435aac54696cdda2051 650 PRINTS PR01159 DNA gyrase subunit B signature 369 383 7.7E-75 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMIS_80 97342693152ed435aac54696cdda2051 650 PRINTS PR01159 DNA gyrase subunit B signature 8 18 7.7E-75 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMIS_80 97342693152ed435aac54696cdda2051 650 PRINTS PR01159 DNA gyrase subunit B signature 383 403 7.7E-75 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMIS_80 97342693152ed435aac54696cdda2051 650 PRINTS PR01159 DNA gyrase subunit B signature 603 615 7.7E-75 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMIS_80 97342693152ed435aac54696cdda2051 650 PRINTS PR01159 DNA gyrase subunit B signature 619 635 7.7E-75 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMIS_80 97342693152ed435aac54696cdda2051 650 SUPERFAMILY SSF55874 8 209 1.57E-68 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_62750 5aa62a7dc191dd3d10fe910a87f67337 830 Gene3D G3DSA:3.10.20.30 485 558 2.9E-32 T 14-10-2018 IPR012675 Beta-grasp domain superfamily AMIS_62750 5aa62a7dc191dd3d10fe910a87f67337 830 Gene3D G3DSA:1.10.3210.10 100 291 1.1E-77 T 14-10-2018 AMIS_62750 5aa62a7dc191dd3d10fe910a87f67337 830 Pfam PF13328 HD domain 129 276 3.4E-48 T 14-10-2018 IPR003607 HD/PDEase domain AMIS_62750 5aa62a7dc191dd3d10fe910a87f67337 830 Pfam PF13291 ACT domain 749 825 1.7E-16 T 14-10-2018 IPR002912 ACT domain AMIS_62750 5aa62a7dc191dd3d10fe910a87f67337 830 SUPERFAMILY SSF109604 106 291 2.2E-70 T 14-10-2018 AMIS_62750 5aa62a7dc191dd3d10fe910a87f67337 830 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 129 824 4.0E-258 T 14-10-2018 IPR004811 RelA/SpoT family GO:0015969 AMIS_62750 5aa62a7dc191dd3d10fe910a87f67337 830 Gene3D G3DSA:3.30.70.260 748 829 4.6E-17 T 14-10-2018 AMIS_62750 5aa62a7dc191dd3d10fe910a87f67337 830 Pfam PF02824 TGS domain 492 551 2.1E-23 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 AMIS_62750 5aa62a7dc191dd3d10fe910a87f67337 830 Pfam PF04607 Region found in RelA / SpoT proteins 336 446 1.8E-38 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 AMIS_62750 5aa62a7dc191dd3d10fe910a87f67337 830 Gene3D G3DSA:3.30.460.10 294 425 9.4E-49 T 14-10-2018 AMIS_62750 5aa62a7dc191dd3d10fe910a87f67337 830 SUPERFAMILY SSF55021 750 827 7.08E-14 T 14-10-2018 AMIS_62750 5aa62a7dc191dd3d10fe910a87f67337 830 SUPERFAMILY SSF81301 281 496 8.5E-65 T 14-10-2018 AMIS_62750 5aa62a7dc191dd3d10fe910a87f67337 830 SUPERFAMILY SSF81271 480 551 3.92E-22 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AMIS_62750 5aa62a7dc191dd3d10fe910a87f67337 830 SMART SM00954 336 446 3.0E-68 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 AMIS_62750 5aa62a7dc191dd3d10fe910a87f67337 830 SMART SM00471 144 254 4.8E-10 T 14-10-2018 IPR003607 HD/PDEase domain AMIS_57470 50f5b8675a4e987227c3a5992eab0ad7 284 Gene3D G3DSA:2.60.120.10 3 245 9.6E-64 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMIS_57470 50f5b8675a4e987227c3a5992eab0ad7 284 SUPERFAMILY SSF51182 128 242 4.45E-18 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily AMIS_57470 50f5b8675a4e987227c3a5992eab0ad7 284 SUPERFAMILY SSF51182 3 111 3.43E-12 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily AMIS_57470 50f5b8675a4e987227c3a5992eab0ad7 284 Pfam PF14499 Domain of unknown function (DUF4437) 6 239 5.7E-36 T 14-10-2018 IPR028013 Protein of unknown function DUF4437 AMIS_40360 f29902abcaae52fda862d3a8495e219c 397 SMART SM00637 303 394 4.6E-34 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 AMIS_40360 f29902abcaae52fda862d3a8495e219c 397 Pfam PF01341 Glycosyl hydrolases family 6 6 244 6.5E-59 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 AMIS_40360 f29902abcaae52fda862d3a8495e219c 397 Pfam PF00553 Cellulose binding domain 303 391 4.4E-24 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 AMIS_40360 f29902abcaae52fda862d3a8495e219c 397 ProSitePatterns PS00656 Glycosyl hydrolases family 6 signature 2. 86 95 - T 14-10-2018 IPR001524 Glycoside hydrolase, family 6, conserved site GO:0004553|GO:0005975 AMIS_40360 f29902abcaae52fda862d3a8495e219c 397 Gene3D G3DSA:2.60.40.290 297 396 4.2E-28 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 AMIS_40360 f29902abcaae52fda862d3a8495e219c 397 SUPERFAMILY SSF49384 299 393 1.88E-27 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 AMIS_40360 f29902abcaae52fda862d3a8495e219c 397 PRINTS PR00733 Glycosyl hydrolase family 6 signature 69 84 1.1E-26 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 AMIS_40360 f29902abcaae52fda862d3a8495e219c 397 PRINTS PR00733 Glycosyl hydrolase family 6 signature 190 203 1.1E-26 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 AMIS_40360 f29902abcaae52fda862d3a8495e219c 397 PRINTS PR00733 Glycosyl hydrolase family 6 signature 125 138 1.1E-26 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 AMIS_40360 f29902abcaae52fda862d3a8495e219c 397 PRINTS PR00733 Glycosyl hydrolase family 6 signature 229 243 1.1E-26 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 AMIS_40360 f29902abcaae52fda862d3a8495e219c 397 PRINTS PR00733 Glycosyl hydrolase family 6 signature 41 54 1.1E-26 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 AMIS_40360 f29902abcaae52fda862d3a8495e219c 397 PRINTS PR00733 Glycosyl hydrolase family 6 signature 155 165 1.1E-26 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 AMIS_40360 f29902abcaae52fda862d3a8495e219c 397 PIRSF PIRSF001100 282 395 920.0 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 AMIS_40360 f29902abcaae52fda862d3a8495e219c 397 PIRSF PIRSF001100 2 267 1.9E-71 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 AMIS_40360 f29902abcaae52fda862d3a8495e219c 397 Gene3D G3DSA:3.20.20.40 1 263 3.6E-83 T 14-10-2018 IPR036434 1, 4-beta cellobiohydrolase superfamily GO:0004553|GO:0030245 AMIS_40360 f29902abcaae52fda862d3a8495e219c 397 SUPERFAMILY SSF51989 3 263 3.01E-74 T 14-10-2018 IPR036434 1, 4-beta cellobiohydrolase superfamily GO:0004553|GO:0030245 AMIS_65600 216f8447880d2292f3a624dc83d27ded 222 SUPERFAMILY SSF56784 4 207 8.69E-42 T 14-10-2018 IPR036412 HAD-like superfamily AMIS_65600 216f8447880d2292f3a624dc83d27ded 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 5.7E-12 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMIS_65600 216f8447880d2292f3a624dc83d27ded 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 141 157 5.7E-12 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMIS_65600 216f8447880d2292f3a624dc83d27ded 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 111 124 5.7E-12 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMIS_65600 216f8447880d2292f3a624dc83d27ded 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 159 179 5.7E-12 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMIS_65600 216f8447880d2292f3a624dc83d27ded 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 196 8.8E-20 T 14-10-2018 AMIS_65600 216f8447880d2292f3a624dc83d27ded 222 Gene3D G3DSA:3.40.50.1000 6 202 3.6E-39 T 14-10-2018 IPR023214 HAD superfamily AMIS_65600 216f8447880d2292f3a624dc83d27ded 222 Gene3D G3DSA:1.10.150.240 17 91 3.6E-39 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AMIS_65600 216f8447880d2292f3a624dc83d27ded 222 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 93 192 7.6E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMIS_48380 02857c871a8d420f00a69ef573e85121 483 Gene3D G3DSA:1.20.1740.10 23 467 5.7E-122 T 14-10-2018 AMIS_48380 02857c871a8d420f00a69ef573e85121 483 PIRSF PIRSF006060 5 470 1.5E-90 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AMIS_48380 02857c871a8d420f00a69ef573e85121 483 Pfam PF13520 Amino acid permease 31 428 1.3E-59 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AMIS_11150 388cab62f0ebc1bc55cd8687733cd2b6 290 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 251 271 8.8E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_11150 388cab62f0ebc1bc55cd8687733cd2b6 290 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 134 8.8E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_11150 388cab62f0ebc1bc55cd8687733cd2b6 290 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 186 8.8E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_11150 388cab62f0ebc1bc55cd8687733cd2b6 290 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 47 64 8.8E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_11150 388cab62f0ebc1bc55cd8687733cd2b6 290 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 196 215 8.8E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_11150 388cab62f0ebc1bc55cd8687733cd2b6 290 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 234 8.8E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_11150 388cab62f0ebc1bc55cd8687733cd2b6 290 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 123 134 1.0E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_11150 388cab62f0ebc1bc55cd8687733cd2b6 290 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 176 184 1.0E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_11150 388cab62f0ebc1bc55cd8687733cd2b6 290 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 196 215 1.0E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_11150 388cab62f0ebc1bc55cd8687733cd2b6 290 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 55 286 2.0E-61 T 14-10-2018 AMIS_11150 388cab62f0ebc1bc55cd8687733cd2b6 290 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 183 211 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMIS_11150 388cab62f0ebc1bc55cd8687733cd2b6 290 SUPERFAMILY SSF51735 45 286 1.91E-80 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_11150 388cab62f0ebc1bc55cd8687733cd2b6 290 Gene3D G3DSA:3.40.50.720 1 288 7.3E-87 T 14-10-2018 AMIS_56650 316e39b7b10b6cd7180995a841ca635a 205 Gene3D G3DSA:1.10.357.10 69 203 1.2E-24 T 14-10-2018 AMIS_56650 316e39b7b10b6cd7180995a841ca635a 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 29 74 5.3E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_56650 316e39b7b10b6cd7180995a841ca635a 205 SUPERFAMILY SSF46689 19 83 2.33E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_56650 316e39b7b10b6cd7180995a841ca635a 205 Pfam PF16859 Bacterial transcriptional repressor C-terminal 91 198 5.2E-21 T 14-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AMIS_56650 316e39b7b10b6cd7180995a841ca635a 205 SUPERFAMILY SSF48498 91 203 5.76E-20 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_56650 316e39b7b10b6cd7180995a841ca635a 205 Gene3D G3DSA:1.10.10.60 14 68 3.0E-20 T 14-10-2018 AMIS_64730 926b4dd96eb0facf81e98738913b2d35 399 Gene3D G3DSA:1.10.300.10 100 192 2.3E-60 T 14-10-2018 AMIS_64730 926b4dd96eb0facf81e98738913b2d35 399 SUPERFAMILY SSF52540 4 392 2.55E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_64730 926b4dd96eb0facf81e98738913b2d35 399 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 399 47.955 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AMIS_64730 926b4dd96eb0facf81e98738913b2d35 399 Gene3D G3DSA:3.40.440.10 6 236 2.3E-60 T 14-10-2018 AMIS_64730 926b4dd96eb0facf81e98738913b2d35 399 Gene3D G3DSA:3.90.170.10 249 397 1.3E-17 T 14-10-2018 AMIS_64730 926b4dd96eb0facf81e98738913b2d35 399 SMART SM00788 4 395 6.7E-20 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AMIS_64730 926b4dd96eb0facf81e98738913b2d35 399 Pfam PF00709 Adenylosuccinate synthetase 6 391 2.0E-72 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AMIS_13560 5ab42e96510f923d44deb4cdc2e32d00 1006 Gene3D G3DSA:1.20.120.330 343 497 1.1E-42 T 14-10-2018 AMIS_13560 5ab42e96510f923d44deb4cdc2e32d00 1006 Gene3D G3DSA:1.20.120.330 854 1006 1.9E-33 T 14-10-2018 AMIS_13560 5ab42e96510f923d44deb4cdc2e32d00 1006 SUPERFAMILY SSF81593 344 495 1.1E-39 T 14-10-2018 AMIS_13560 5ab42e96510f923d44deb4cdc2e32d00 1006 Pfam PF08335 GlnD PII-uridylyltransferase 864 1000 5.4E-17 T 14-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AMIS_13560 5ab42e96510f923d44deb4cdc2e32d00 1006 Pfam PF08335 GlnD PII-uridylyltransferase 350 494 5.7E-37 T 14-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AMIS_13560 5ab42e96510f923d44deb4cdc2e32d00 1006 Gene3D G3DSA:3.30.460.100 609 847 1.7E-55 T 14-10-2018 AMIS_13560 5ab42e96510f923d44deb4cdc2e32d00 1006 Gene3D G3DSA:3.30.460.100 119 331 2.7E-52 T 14-10-2018 AMIS_13560 5ab42e96510f923d44deb4cdc2e32d00 1006 SUPERFAMILY SSF81593 857 1004 3.53E-31 T 14-10-2018 AMIS_13560 5ab42e96510f923d44deb4cdc2e32d00 1006 SUPERFAMILY SSF81301 94 337 9.15E-56 T 14-10-2018 AMIS_13560 5ab42e96510f923d44deb4cdc2e32d00 1006 SUPERFAMILY SSF81301 572 845 4.25E-62 T 14-10-2018 AMIS_13560 5ab42e96510f923d44deb4cdc2e32d00 1006 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 111 329 1.5E-33 T 14-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 AMIS_13560 5ab42e96510f923d44deb4cdc2e32d00 1006 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 601 842 2.2E-46 T 14-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 AMIS_1850 82d35dc876366fecfb7579fdf7cdb9c2 108 SUPERFAMILY SSF52091 6 104 1.08E-22 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_1850 82d35dc876366fecfb7579fdf7cdb9c2 108 Pfam PF13466 STAS domain 19 98 3.1E-14 T 14-10-2018 IPR002645 STAS domain AMIS_1850 82d35dc876366fecfb7579fdf7cdb9c2 108 Gene3D G3DSA:3.30.750.24 3 108 1.1E-25 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_1850 82d35dc876366fecfb7579fdf7cdb9c2 108 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 6 107 5.6E-20 T 14-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 AMIS_73960 b0f82c864bae2564132b15ef56bb218a 139 Pfam PF00293 NUDIX domain 16 132 9.2E-19 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMIS_73960 b0f82c864bae2564132b15ef56bb218a 139 PRINTS PR00502 NUDIX hydrolase family signature 56 71 1.8E-8 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AMIS_73960 b0f82c864bae2564132b15ef56bb218a 139 PRINTS PR00502 NUDIX hydrolase family signature 42 56 1.8E-8 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AMIS_73960 b0f82c864bae2564132b15ef56bb218a 139 Gene3D G3DSA:3.90.79.10 14 137 3.1E-33 T 14-10-2018 AMIS_73960 b0f82c864bae2564132b15ef56bb218a 139 SUPERFAMILY SSF55811 3 135 5.15E-32 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMIS_4780 5676f9db513a149c576cb3b7770b1c8b 486 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 13 478 4.1E-188 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AMIS_4780 5676f9db513a149c576cb3b7770b1c8b 486 SMART SM00997 244 406 1.9E-101 T 14-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AMIS_4780 5676f9db513a149c576cb3b7770b1c8b 486 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 12 485 8.4E-145 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AMIS_4780 5676f9db513a149c576cb3b7770b1c8b 486 PIRSF PIRSF001109 2 486 1.4E-186 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AMIS_4780 5676f9db513a149c576cb3b7770b1c8b 486 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 266 282 - T 14-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AMIS_4780 5676f9db513a149c576cb3b7770b1c8b 486 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 244 406 6.8E-79 T 14-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AMIS_4780 5676f9db513a149c576cb3b7770b1c8b 486 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 84 98 - T 14-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AMIS_4780 5676f9db513a149c576cb3b7770b1c8b 486 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 8 478 48.486 T 14-10-2018 IPR034373 Adenosylhomocysteinase GO:0004013|GO:0019510|GO:0051287 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-2408508|Reactome: R-HSA-5578997 AMIS_4780 5676f9db513a149c576cb3b7770b1c8b 486 SUPERFAMILY SSF51735 244 406 1.18E-74 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_4780 5676f9db513a149c576cb3b7770b1c8b 486 SMART SM00996 12 485 0.0 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AMIS_4780 5676f9db513a149c576cb3b7770b1c8b 486 Gene3D G3DSA:3.40.50.1480 15 486 4.4E-236 T 14-10-2018 AMIS_4780 5676f9db513a149c576cb3b7770b1c8b 486 Gene3D G3DSA:3.40.50.720 247 407 4.4E-236 T 14-10-2018 AMIS_4780 5676f9db513a149c576cb3b7770b1c8b 486 SUPERFAMILY SSF52283 11 486 3.63E-113 T 14-10-2018 AMIS_45550 270c2e89119e3b8aced97a4bcf86ba81 589 Pfam PF05598 Transposase domain (DUF772) 72 146 9.7E-18 T 14-10-2018 IPR008490 Transposase InsH, N-terminal AMIS_45550 270c2e89119e3b8aced97a4bcf86ba81 589 Pfam PF13751 Transposase DDE domain 443 563 3.7E-27 T 14-10-2018 IPR025668 Transposase DDE domain AMIS_63860 314454283effd46f3f5749ff4f6bdf7b 385 SMART SM00062 120 353 2.7E-13 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMIS_63860 314454283effd46f3f5749ff4f6bdf7b 385 SUPERFAMILY SSF53850 121 342 8.59E-25 T 14-10-2018 AMIS_63860 314454283effd46f3f5749ff4f6bdf7b 385 Gene3D G3DSA:3.40.190.10 118 335 5.1E-34 T 14-10-2018 AMIS_63860 314454283effd46f3f5749ff4f6bdf7b 385 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 121 336 1.1E-24 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMIS_63860 314454283effd46f3f5749ff4f6bdf7b 385 Gene3D G3DSA:3.40.190.10 219 307 5.1E-34 T 14-10-2018 AMIS_27150 04e54e845067bb4c975b2dfc79540875 489 SUPERFAMILY SSF55073 327 478 1.41E-44 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_27150 04e54e845067bb4c975b2dfc79540875 489 Pfam PF00990 Diguanylate cyclase, GGDEF domain 322 476 4.8E-43 T 14-10-2018 IPR000160 GGDEF domain AMIS_27150 04e54e845067bb4c975b2dfc79540875 489 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 320 479 3.5E-47 T 14-10-2018 IPR000160 GGDEF domain AMIS_27150 04e54e845067bb4c975b2dfc79540875 489 SMART SM00267 310 480 2.1E-58 T 14-10-2018 IPR000160 GGDEF domain AMIS_27150 04e54e845067bb4c975b2dfc79540875 489 Gene3D G3DSA:3.30.70.270 318 483 2.7E-52 T 14-10-2018 AMIS_25040 150d11dc3efd24c6585e0d461960fb55 152 SUPERFAMILY SSF50370 27 147 8.34E-13 T 14-10-2018 IPR035992 Ricin B-like lectins AMIS_25040 150d11dc3efd24c6585e0d461960fb55 152 Pfam PF00652 Ricin-type beta-trefoil lectin domain 42 146 8.8E-8 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_25040 150d11dc3efd24c6585e0d461960fb55 152 Gene3D G3DSA:2.80.10.50 38 148 1.6E-10 T 14-10-2018 AMIS_14920 ef3d41335974953e4e4ca69ab37beef7 253 Pfam PF04240 Carotenoid biosynthesis protein 34 232 9.8E-40 T 14-10-2018 IPR007354 Carotene biosynthesis associated membrane protein AMIS_64260 df57d4ddda1972bb7ce72b33295347bc 778 Gene3D G3DSA:3.40.50.300 469 619 7.6E-7 T 14-10-2018 AMIS_64260 df57d4ddda1972bb7ce72b33295347bc 778 Gene3D G3DSA:3.40.50.300 620 777 2.7E-14 T 14-10-2018 AMIS_64260 df57d4ddda1972bb7ce72b33295347bc 778 Pfam PF13538 UvrD-like helicase C-terminal domain 715 764 1.3E-8 T 14-10-2018 IPR027785 UvrD-like helicase C-terminal domain AMIS_64260 df57d4ddda1972bb7ce72b33295347bc 778 Gene3D G3DSA:3.40.50.300 186 413 7.0E-10 T 14-10-2018 AMIS_64260 df57d4ddda1972bb7ce72b33295347bc 778 Pfam PF13245 AAA domain 209 587 3.8E-11 T 14-10-2018 AMIS_64260 df57d4ddda1972bb7ce72b33295347bc 778 SUPERFAMILY SSF52540 189 769 3.23E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_13130 8873d55b34134bf54d5c7a6a1423f8d8 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 52 1.2E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_13130 8873d55b34134bf54d5c7a6a1423f8d8 211 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 72 173 2.1E-9 T 14-10-2018 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 AMIS_13130 8873d55b34134bf54d5c7a6a1423f8d8 211 Gene3D G3DSA:1.10.357.10 71 192 5.1E-15 T 14-10-2018 AMIS_13130 8873d55b34134bf54d5c7a6a1423f8d8 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 5.4E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_13130 8873d55b34134bf54d5c7a6a1423f8d8 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 5.4E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_13130 8873d55b34134bf54d5c7a6a1423f8d8 211 Gene3D G3DSA:1.10.10.60 3 62 6.6E-18 T 14-10-2018 AMIS_13130 8873d55b34134bf54d5c7a6a1423f8d8 211 SUPERFAMILY SSF46689 3 61 2.92E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_13130 8873d55b34134bf54d5c7a6a1423f8d8 211 SUPERFAMILY SSF48498 74 174 3.11E-13 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_25120 0186b83889e99fa252507ad4f995bf75 637 Gene3D G3DSA:3.50.50.60 150 400 5.5E-31 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_25120 0186b83889e99fa252507ad4f995bf75 637 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 383 397 - T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AMIS_25120 0186b83889e99fa252507ad4f995bf75 637 PIRSF PIRSF028937 71 145 0.007 T 14-10-2018 IPR012400 Long-chain-alcohol oxidase GO:0046577|GO:0055114 MetaCyc: PWY-2724 AMIS_25120 0186b83889e99fa252507ad4f995bf75 637 PIRSF PIRSF028937 140 636 2.4E-100 T 14-10-2018 IPR012400 Long-chain-alcohol oxidase GO:0046577|GO:0055114 MetaCyc: PWY-2724 AMIS_25120 0186b83889e99fa252507ad4f995bf75 637 PIRSF PIRSF028937 1 27 150.0 T 14-10-2018 IPR012400 Long-chain-alcohol oxidase GO:0046577|GO:0055114 MetaCyc: PWY-2724 AMIS_25120 0186b83889e99fa252507ad4f995bf75 637 SUPERFAMILY SSF51905 146 635 3.2E-52 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_25120 0186b83889e99fa252507ad4f995bf75 637 Gene3D G3DSA:3.30.410.10 265 321 5.5E-31 T 14-10-2018 AMIS_25120 0186b83889e99fa252507ad4f995bf75 637 Gene3D G3DSA:3.50.50.60 541 637 9.1E-16 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_25120 0186b83889e99fa252507ad4f995bf75 637 Pfam PF00732 GMC oxidoreductase 150 398 2.0E-45 T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AMIS_25120 0186b83889e99fa252507ad4f995bf75 637 Pfam PF05199 GMC oxidoreductase 491 629 9.9E-21 T 14-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 AMIS_52700 b64b0fff23f40fff8d043f65fe041299 481 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 256 390 2.3E-30 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMIS_52700 b64b0fff23f40fff8d043f65fe041299 481 SUPERFAMILY SSF52540 217 474 3.37E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_52700 b64b0fff23f40fff8d043f65fe041299 481 SMART SM00382 252 393 3.5E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_52700 b64b0fff23f40fff8d043f65fe041299 481 Gene3D G3DSA:3.40.50.300 217 391 9.2E-55 T 14-10-2018 AMIS_52700 b64b0fff23f40fff8d043f65fe041299 481 ProSitePatterns PS00674 AAA-protein family signature. 361 379 - T 14-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 AMIS_52700 b64b0fff23f40fff8d043f65fe041299 481 Gene3D G3DSA:1.10.8.60 392 457 9.2E-55 T 14-10-2018 AMIS_33580 aabfeaca8de4b82b59099001b625c7ab 461 SMART SM00345 6 67 1.9E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_33580 aabfeaca8de4b82b59099001b625c7ab 461 SUPERFAMILY SSF46785 6 71 1.63E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_33580 aabfeaca8de4b82b59099001b625c7ab 461 Pfam PF00155 Aminotransferase class I and II 109 457 8.6E-23 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMIS_33580 aabfeaca8de4b82b59099001b625c7ab 461 SUPERFAMILY SSF53383 95 461 4.31E-84 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_33580 aabfeaca8de4b82b59099001b625c7ab 461 Gene3D G3DSA:3.40.640.10 140 356 1.9E-95 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_33580 aabfeaca8de4b82b59099001b625c7ab 461 Gene3D G3DSA:1.10.10.10 8 78 7.6E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_33580 aabfeaca8de4b82b59099001b625c7ab 461 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 67 7.8E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_33580 aabfeaca8de4b82b59099001b625c7ab 461 Gene3D G3DSA:3.90.1150.10 106 460 1.9E-95 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMIS_66790 100175e4b67c09e683c780c3ca4e31de 292 SUPERFAMILY SSF53300 76 217 8.29E-12 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMIS_66790 100175e4b67c09e683c780c3ca4e31de 292 Pfam PF01882 Protein of unknown function DUF58 36 119 9.6E-21 T 14-10-2018 IPR002881 Domain of unknown function DUF58 AMIS_66790 100175e4b67c09e683c780c3ca4e31de 292 Gene3D G3DSA:3.40.50.410 72 267 8.1E-9 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMIS_52440 e77178a7d2ec0ab4b6718e0225918a10 687 SMART SM00073 2 98 3.8E-10 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AMIS_52440 e77178a7d2ec0ab4b6718e0225918a10 687 Gene3D G3DSA:2.30.30.40 413 540 2.6E-14 T 14-10-2018 AMIS_52440 e77178a7d2ec0ab4b6718e0225918a10 687 Gene3D G3DSA:2.40.50.180 436 500 2.6E-14 T 14-10-2018 AMIS_52440 e77178a7d2ec0ab4b6718e0225918a10 687 Gene3D G3DSA:3.30.565.10 225 412 4.8E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_52440 e77178a7d2ec0ab4b6718e0225918a10 687 SMART SM00387 272 413 5.2E-13 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_52440 e77178a7d2ec0ab4b6718e0225918a10 687 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 275 412 2.2E-11 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_52440 e77178a7d2ec0ab4b6718e0225918a10 687 Gene3D G3DSA:1.20.120.160 2 117 4.2E-17 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMIS_52440 e77178a7d2ec0ab4b6718e0225918a10 687 SUPERFAMILY SSF55874 230 411 2.1E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_52440 e77178a7d2ec0ab4b6718e0225918a10 687 SUPERFAMILY SSF47226 5 111 8.77E-18 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMIS_52440 e77178a7d2ec0ab4b6718e0225918a10 687 SMART SM00260 405 545 1.3E-4 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMIS_52440 e77178a7d2ec0ab4b6718e0225918a10 687 Gene3D G3DSA:3.40.50.12740 566 687 2.7E-39 T 14-10-2018 AMIS_52440 e77178a7d2ec0ab4b6718e0225918a10 687 SUPERFAMILY SSF50341 412 544 1.44E-14 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 AMIS_52440 e77178a7d2ec0ab4b6718e0225918a10 687 Pfam PF01584 CheW-like domain 418 546 7.0E-11 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMIS_52440 e77178a7d2ec0ab4b6718e0225918a10 687 Pfam PF01627 Hpt domain 7 94 5.6E-11 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AMIS_52440 e77178a7d2ec0ab4b6718e0225918a10 687 SMART SM00448 566 680 4.7E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_52440 e77178a7d2ec0ab4b6718e0225918a10 687 SUPERFAMILY SSF52172 565 684 4.55E-34 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_52440 e77178a7d2ec0ab4b6718e0225918a10 687 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 391 1.5E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_52440 e77178a7d2ec0ab4b6718e0225918a10 687 PRINTS PR00344 Bacterial sensor protein C-terminal signature 316 330 1.5E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_52440 e77178a7d2ec0ab4b6718e0225918a10 687 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 410 1.5E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_52440 e77178a7d2ec0ab4b6718e0225918a10 687 Pfam PF00072 Response regulator receiver domain 568 680 8.4E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_36770 609314801d2b583d852c9c442ebbc543 398 Pfam PF07690 Major Facilitator Superfamily 21 269 1.5E-27 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_36770 609314801d2b583d852c9c442ebbc543 398 Gene3D G3DSA:1.20.1250.20 12 387 1.3E-42 T 14-10-2018 AMIS_36770 609314801d2b583d852c9c442ebbc543 398 SUPERFAMILY SSF103473 13 390 7.85E-49 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_34190 2cee7f3f76c330ad3161e6cf2203b728 122 SUPERFAMILY SSF46785 2 108 1.24E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_34190 2cee7f3f76c330ad3161e6cf2203b728 122 Gene3D G3DSA:1.10.10.10 2 109 3.5E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_34190 2cee7f3f76c330ad3161e6cf2203b728 122 Pfam PF12840 Helix-turn-helix domain 8 61 8.4E-14 T 14-10-2018 AMIS_34190 2cee7f3f76c330ad3161e6cf2203b728 122 SMART SM00418 8 89 6.8E-15 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_44750 1a9bf25d8ac5d0766331cf7bb15991af 283 Pfam PF13460 NAD(P)H-binding 7 179 3.1E-20 T 14-10-2018 IPR016040 NAD(P)-binding domain AMIS_44750 1a9bf25d8ac5d0766331cf7bb15991af 283 SUPERFAMILY SSF51735 2 243 5.94E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_44750 1a9bf25d8ac5d0766331cf7bb15991af 283 Gene3D G3DSA:3.40.50.720 3 283 1.8E-64 T 14-10-2018 AMIS_38790 7b2dfd3d476b19dbe4499b0190432c7a 556 SUPERFAMILY SSF49785 189 300 5.1E-27 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_38790 7b2dfd3d476b19dbe4499b0190432c7a 556 Gene3D G3DSA:2.60.120.260 169 300 3.0E-32 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_38790 7b2dfd3d476b19dbe4499b0190432c7a 556 SUPERFAMILY SSF49899 319 556 3.78E-69 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily AMIS_38790 7b2dfd3d476b19dbe4499b0190432c7a 556 ProSitePatterns PS01034 Glycosyl hydrolases family 16 active sites. 437 448 - T 14-10-2018 IPR008263 Glycoside hydrolase, family 16, active site GO:0004553|GO:0005975 AMIS_38790 7b2dfd3d476b19dbe4499b0190432c7a 556 Pfam PF00722 Glycosyl hydrolases family 16 354 553 1.7E-32 T 14-10-2018 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 AMIS_38790 7b2dfd3d476b19dbe4499b0190432c7a 556 Pfam PF00754 F5/8 type C domain 175 295 1.2E-22 T 14-10-2018 IPR000421 Coagulation factor 5/8 C-terminal domain AMIS_38790 7b2dfd3d476b19dbe4499b0190432c7a 556 Pfam PF00754 F5/8 type C domain 39 144 1.6E-24 T 14-10-2018 IPR000421 Coagulation factor 5/8 C-terminal domain AMIS_38790 7b2dfd3d476b19dbe4499b0190432c7a 556 Gene3D G3DSA:2.60.120.200 319 556 1.9E-82 T 14-10-2018 AMIS_38790 7b2dfd3d476b19dbe4499b0190432c7a 556 Gene3D G3DSA:2.60.120.260 32 156 4.3E-35 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_38790 7b2dfd3d476b19dbe4499b0190432c7a 556 SUPERFAMILY SSF49785 30 156 3.69E-29 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_46520 444a9cb672e23db0f63ee4cd5711406a 203 Gene3D G3DSA:3.20.20.70 1 199 4.8E-64 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_46520 444a9cb672e23db0f63ee4cd5711406a 203 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 4 182 8.4E-63 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AMIS_46520 444a9cb672e23db0f63ee4cd5711406a 203 SUPERFAMILY SSF51569 3 192 1.5E-56 T 14-10-2018 AMIS_46520 444a9cb672e23db0f63ee4cd5711406a 203 Pfam PF01081 KDPG and KHG aldolase 7 181 1.4E-60 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AMIS_46520 444a9cb672e23db0f63ee4cd5711406a 203 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 32 41 - T 14-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AMIS_46520 444a9cb672e23db0f63ee4cd5711406a 203 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 119 132 - T 14-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AMIS_74340 58c8dfd10aa1b8ffa4080e455887ff71 269 Gene3D G3DSA:3.30.70.1020 110 182 1.5E-30 T 14-10-2018 AMIS_74340 58c8dfd10aa1b8ffa4080e455887ff71 269 TIGRFAM TIGR00685 T6PP: trehalose-phosphatase 26 261 8.0E-33 T 14-10-2018 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 AMIS_74340 58c8dfd10aa1b8ffa4080e455887ff71 269 SUPERFAMILY SSF56784 29 263 1.01E-28 T 14-10-2018 IPR036412 HAD-like superfamily AMIS_74340 58c8dfd10aa1b8ffa4080e455887ff71 269 Gene3D G3DSA:3.40.50.1000 30 242 1.5E-30 T 14-10-2018 IPR023214 HAD superfamily AMIS_74340 58c8dfd10aa1b8ffa4080e455887ff71 269 Pfam PF02358 Trehalose-phosphatase 30 253 2.6E-25 T 14-10-2018 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 AMIS_21070 bae41676442e43790f31a51d01af73f8 461 SUPERFAMILY SSF52540 189 442 6.12E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_21070 bae41676442e43790f31a51d01af73f8 461 Gene3D G3DSA:3.40.50.300 181 456 1.1E-86 T 14-10-2018 AMIS_21070 bae41676442e43790f31a51d01af73f8 461 Pfam PF03796 DnaB-like helicase C terminal domain 200 452 8.8E-76 T 14-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 AMIS_21070 bae41676442e43790f31a51d01af73f8 461 SMART SM00382 217 458 9.5E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_21070 bae41676442e43790f31a51d01af73f8 461 SUPERFAMILY SSF48024 24 134 2.22E-22 T 14-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 AMIS_21070 bae41676442e43790f31a51d01af73f8 461 Pfam PF00772 DnaB-like helicase N terminal domain 27 127 2.0E-21 T 14-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 AMIS_21070 bae41676442e43790f31a51d01af73f8 461 Gene3D G3DSA:1.10.860.10 18 180 3.0E-36 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AMIS_74540 e17fa2ef9187427f45eebf90fb3076f7 466 Gene3D G3DSA:3.50.50.60 4 331 1.1E-100 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_74540 e17fa2ef9187427f45eebf90fb3076f7 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 2.3E-52 T 14-10-2018 AMIS_74540 e17fa2ef9187427f45eebf90fb3076f7 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 409 424 2.3E-52 T 14-10-2018 AMIS_74540 e17fa2ef9187427f45eebf90fb3076f7 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 431 451 2.3E-52 T 14-10-2018 AMIS_74540 e17fa2ef9187427f45eebf90fb3076f7 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 344 365 2.3E-52 T 14-10-2018 AMIS_74540 e17fa2ef9187427f45eebf90fb3076f7 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 35 50 2.3E-52 T 14-10-2018 AMIS_74540 e17fa2ef9187427f45eebf90fb3076f7 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 2.3E-52 T 14-10-2018 AMIS_74540 e17fa2ef9187427f45eebf90fb3076f7 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 144 153 2.3E-52 T 14-10-2018 AMIS_74540 e17fa2ef9187427f45eebf90fb3076f7 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 2.3E-52 T 14-10-2018 AMIS_74540 e17fa2ef9187427f45eebf90fb3076f7 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 180 205 2.3E-52 T 14-10-2018 AMIS_74540 e17fa2ef9187427f45eebf90fb3076f7 466 SUPERFAMILY SSF51905 3 337 1.75E-50 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_74540 e17fa2ef9187427f45eebf90fb3076f7 466 Gene3D G3DSA:3.50.50.60 155 273 1.1E-100 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_74540 e17fa2ef9187427f45eebf90fb3076f7 466 SUPERFAMILY SSF55424 347 463 3.95E-29 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AMIS_74540 e17fa2ef9187427f45eebf90fb3076f7 466 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 328 1.2E-58 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMIS_74540 e17fa2ef9187427f45eebf90fb3076f7 466 Gene3D G3DSA:3.30.390.30 341 462 3.7E-36 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AMIS_74540 e17fa2ef9187427f45eebf90fb3076f7 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 5.4E-37 T 14-10-2018 AMIS_74540 e17fa2ef9187427f45eebf90fb3076f7 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 141 159 5.4E-37 T 14-10-2018 AMIS_74540 e17fa2ef9187427f45eebf90fb3076f7 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 180 198 5.4E-37 T 14-10-2018 AMIS_74540 e17fa2ef9187427f45eebf90fb3076f7 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 5.4E-37 T 14-10-2018 AMIS_74540 e17fa2ef9187427f45eebf90fb3076f7 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 5.4E-37 T 14-10-2018 AMIS_74540 e17fa2ef9187427f45eebf90fb3076f7 466 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 350 456 1.3E-23 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AMIS_74540 e17fa2ef9187427f45eebf90fb3076f7 466 PIRSF PIRSF000350 1 463 5.3E-73 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 AMIS_62050 47e5c513ad1eee8012bef280b3798f65 761 Hamap MF_00983 Probable primosomal protein N' [priA]. 24 760 20.627 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 AMIS_62050 47e5c513ad1eee8012bef280b3798f65 761 Gene3D G3DSA:3.40.50.300 275 428 9.6E-22 T 14-10-2018 AMIS_62050 47e5c513ad1eee8012bef280b3798f65 761 Gene3D G3DSA:1.10.8.630 18 129 2.4E-16 T 14-10-2018 AMIS_37730 beec3e743a5a1af76be9298318377225 401 Gene3D G3DSA:3.30.450.40 6 173 2.5E-37 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_37730 beec3e743a5a1af76be9298318377225 401 SMART SM00331 188 399 7.3E-32 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_37730 beec3e743a5a1af76be9298318377225 401 SMART SM00065 26 173 4.9E-22 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_37730 beec3e743a5a1af76be9298318377225 401 Gene3D G3DSA:3.60.40.10 183 400 1.1E-49 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_37730 beec3e743a5a1af76be9298318377225 401 SUPERFAMILY SSF55781 10 160 5.02E-31 T 14-10-2018 AMIS_37730 beec3e743a5a1af76be9298318377225 401 SUPERFAMILY SSF81606 192 398 1.12E-7 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_37730 beec3e743a5a1af76be9298318377225 401 Pfam PF13185 GAF domain 26 160 4.9E-23 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_37730 beec3e743a5a1af76be9298318377225 401 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 218 399 4.6E-37 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_14450 2ff2a610392cfb286ff69510b18242af 242 Gene3D G3DSA:3.40.50.1820 55 237 2.8E-17 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_14450 2ff2a610392cfb286ff69510b18242af 242 SUPERFAMILY SSF53474 60 237 3.76E-21 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_62530 03e7e1889b66f67ccf3bfe93d402f678 126 Pfam PF01042 Endoribonuclease L-PSP 11 122 6.1E-27 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 AMIS_62530 03e7e1889b66f67ccf3bfe93d402f678 126 SUPERFAMILY SSF55298 2 124 2.51E-35 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AMIS_62530 03e7e1889b66f67ccf3bfe93d402f678 126 Gene3D G3DSA:3.30.1330.40 2 124 1.2E-36 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AMIS_67220 53748fea271a506e66782739f3599ed5 120 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 18 64 3.3E-10 T 14-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 AMIS_67220 53748fea271a506e66782739f3599ed5 120 Gene3D G3DSA:1.10.1660.10 15 68 7.6E-11 T 14-10-2018 AMIS_67220 53748fea271a506e66782739f3599ed5 120 Pfam PF12728 Helix-turn-helix domain 19 61 2.0E-8 T 14-10-2018 AMIS_27690 5c1a1f1b185c268c7dde7bf736caa7ab 92 Pfam PF05901 Excalibur calcium-binding domain 34 90 3.5E-17 T 14-10-2018 IPR008613 Excalibur calcium-binding domain AMIS_27690 5c1a1f1b185c268c7dde7bf736caa7ab 92 SMART SM00894 33 90 1.2E-7 T 14-10-2018 IPR008613 Excalibur calcium-binding domain AMIS_14120 203b809abd0f88f61bcd2aec1882a240 169 Gene3D G3DSA:3.40.50.300 1 166 9.2E-26 T 14-10-2018 AMIS_14120 203b809abd0f88f61bcd2aec1882a240 169 SUPERFAMILY SSF52540 5 152 1.06E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_14120 203b809abd0f88f61bcd2aec1882a240 169 Pfam PF13671 AAA domain 3 124 5.8E-20 T 14-10-2018 AMIS_60020 9212806ef7c7598c0e996aa1145362fe 261 SMART SM00871 118 257 2.3E-15 T 14-10-2018 IPR010499 Bacterial transcription activator, effector binding AMIS_60020 9212806ef7c7598c0e996aa1145362fe 261 Gene3D G3DSA:3.20.80.10 119 258 1.9E-23 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily AMIS_60020 9212806ef7c7598c0e996aa1145362fe 261 SUPERFAMILY SSF55136 120 257 6.45E-16 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily AMIS_60020 9212806ef7c7598c0e996aa1145362fe 261 SUPERFAMILY SSF46955 5 107 5.49E-18 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily AMIS_60020 9212806ef7c7598c0e996aa1145362fe 261 Pfam PF13411 MerR HTH family regulatory protein 6 73 9.7E-11 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_60020 9212806ef7c7598c0e996aa1145362fe 261 Gene3D G3DSA:1.10.1660.10 4 116 3.0E-19 T 14-10-2018 AMIS_60020 9212806ef7c7598c0e996aa1145362fe 261 SMART SM00422 5 75 9.8E-11 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_60020 9212806ef7c7598c0e996aa1145362fe 261 Pfam PF06445 GyrI-like small molecule binding domain 192 256 6.1E-13 T 14-10-2018 IPR029442 GyrI-like small molecule binding domain AMIS_32150 03f35a630327f5e114fd8eec51da1c82 395 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 33 377 1.7E-95 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AMIS_32150 03f35a630327f5e114fd8eec51da1c82 395 PIRSF PIRSF001455 25 385 4.2E-93 T 14-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AMIS_32150 03f35a630327f5e114fd8eec51da1c82 395 Gene3D G3DSA:1.20.1090.10 192 383 8.3E-52 T 14-10-2018 AMIS_32150 03f35a630327f5e114fd8eec51da1c82 395 Pfam PF01761 3-dehydroquinate synthase 87 327 6.6E-83 T 14-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AMIS_32150 03f35a630327f5e114fd8eec51da1c82 395 Gene3D G3DSA:3.40.50.1970 11 191 1.5E-52 T 14-10-2018 AMIS_32150 03f35a630327f5e114fd8eec51da1c82 395 SUPERFAMILY SSF56796 29 378 4.32E-91 T 14-10-2018 AMIS_69970 82df5086aa438d6326880d6d9b7311cd 402 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 7 394 43.905 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AMIS_69970 82df5086aa438d6326880d6d9b7311cd 402 SUPERFAMILY SSF69055 303 396 1.27E-24 T 14-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AMIS_69970 82df5086aa438d6326880d6d9b7311cd 402 Gene3D G3DSA:1.10.1740.10 313 398 3.7E-27 T 14-10-2018 AMIS_69970 82df5086aa438d6326880d6d9b7311cd 402 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 7 145 5.0E-36 T 14-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AMIS_69970 82df5086aa438d6326880d6d9b7311cd 402 SUPERFAMILY SSF55347 139 275 1.44E-53 T 14-10-2018 AMIS_69970 82df5086aa438d6326880d6d9b7311cd 402 Gene3D G3DSA:3.40.50.720 1 161 1.7E-45 T 14-10-2018 AMIS_69970 82df5086aa438d6326880d6d9b7311cd 402 PIRSF PIRSF006205 4 400 6.2E-138 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AMIS_69970 82df5086aa438d6326880d6d9b7311cd 402 SUPERFAMILY SSF51735 5 161 2.71E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_69970 82df5086aa438d6326880d6d9b7311cd 402 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 157 240 9.3E-37 T 14-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AMIS_69970 82df5086aa438d6326880d6d9b7311cd 402 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 5 399 2.1E-115 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AMIS_69970 82df5086aa438d6326880d6d9b7311cd 402 Pfam PF13288 DXP reductoisomerase C-terminal domain 273 389 5.5E-34 T 14-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AMIS_8770 04222ed9c3195f7c8b13d53fdf930819 206 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 148 201 7.4E-24 T 14-10-2018 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal AMIS_8770 04222ed9c3195f7c8b13d53fdf930819 206 Hamap MF_00839 Ribosome hibernation promoting factor [hpf]. 1 205 23.629 T 14-10-2018 IPR034694 Ribosome hibernation promoting factor, long/plastid AMIS_8770 04222ed9c3195f7c8b13d53fdf930819 206 SUPERFAMILY SSF69754 3 111 8.5E-28 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like AMIS_8770 04222ed9c3195f7c8b13d53fdf930819 206 Gene3D G3DSA:3.30.505.50 159 204 1.0E-18 T 14-10-2018 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily AMIS_8770 04222ed9c3195f7c8b13d53fdf930819 206 Gene3D G3DSA:3.30.160.100 3 105 4.2E-24 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like AMIS_8770 04222ed9c3195f7c8b13d53fdf930819 206 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 2 102 1.4E-27 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 AMIS_8770 04222ed9c3195f7c8b13d53fdf930819 206 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 98 7.4E-23 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 AMIS_24640 6cdc48aeae0ec128210bbac4445381f1 321 Gene3D G3DSA:3.40.50.1820 4 313 1.5E-79 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_24640 6cdc48aeae0ec128210bbac4445381f1 321 Pfam PF07859 alpha/beta hydrolase fold 82 281 4.2E-57 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 AMIS_24640 6cdc48aeae0ec128210bbac4445381f1 321 SUPERFAMILY SSF53474 66 307 5.6E-61 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_11460 421e5cb902331e9eb81881e0f1680a74 506 Gene3D G3DSA:3.40.50.300 159 340 8.4E-49 T 14-10-2018 AMIS_11460 421e5cb902331e9eb81881e0f1680a74 506 SUPERFAMILY SSF82051 4 157 3.66E-46 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily AMIS_11460 421e5cb902331e9eb81881e0f1680a74 506 Pfam PF01018 GTP1/OBG 5 157 2.2E-49 T 14-10-2018 IPR006169 GTP1/OBG domain AMIS_11460 421e5cb902331e9eb81881e0f1680a74 506 SUPERFAMILY SSF52540 161 342 1.53E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_11460 421e5cb902331e9eb81881e0f1680a74 506 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 4 328 4.8E-123 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AMIS_11460 421e5cb902331e9eb81881e0f1680a74 506 Pfam PF01926 50S ribosome-binding GTPase 161 283 2.1E-22 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 AMIS_11460 421e5cb902331e9eb81881e0f1680a74 506 ProSitePatterns PS00905 GTP1/OBG family signature. 212 225 - T 14-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 AMIS_11460 421e5cb902331e9eb81881e0f1680a74 506 SUPERFAMILY SSF102741 354 426 1.44E-22 T 14-10-2018 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily AMIS_11460 421e5cb902331e9eb81881e0f1680a74 506 Gene3D G3DSA:2.40.240.60 354 427 4.1E-28 T 14-10-2018 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily AMIS_11460 421e5cb902331e9eb81881e0f1680a74 506 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 161 320 8.5E-13 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AMIS_11460 421e5cb902331e9eb81881e0f1680a74 506 Hamap MF_01454 GTPase Obg [obg]. 3 330 43.902 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AMIS_11460 421e5cb902331e9eb81881e0f1680a74 506 TIGRFAM TIGR03595 Obg_CgtA_exten: Obg family GTPase CgtA, C-terminal extension 356 424 1.3E-27 T 14-10-2018 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 AMIS_11460 421e5cb902331e9eb81881e0f1680a74 506 Gene3D G3DSA:2.70.210.12 1 158 2.7E-48 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily AMIS_11460 421e5cb902331e9eb81881e0f1680a74 506 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 227 245 6.5E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 AMIS_11460 421e5cb902331e9eb81881e0f1680a74 506 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 210 225 6.5E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 AMIS_11460 421e5cb902331e9eb81881e0f1680a74 506 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 6.5E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 AMIS_11460 421e5cb902331e9eb81881e0f1680a74 506 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 6.5E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 AMIS_11460 421e5cb902331e9eb81881e0f1680a74 506 Pfam PF09269 Domain of unknown function (DUF1967) 356 424 1.9E-27 T 14-10-2018 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 AMIS_9010 300ff65a5d7a445c8d473fa4424502c7 341 Gene3D G3DSA:3.30.420.40 7 337 5.0E-74 T 14-10-2018 AMIS_9010 300ff65a5d7a445c8d473fa4424502c7 341 SMART SM00842 6 171 7.2E-7 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 AMIS_9010 300ff65a5d7a445c8d473fa4424502c7 341 Gene3D G3DSA:3.30.1490.300 82 139 5.0E-74 T 14-10-2018 AMIS_9010 300ff65a5d7a445c8d473fa4424502c7 341 SUPERFAMILY SSF53067 179 337 3.74E-18 T 14-10-2018 AMIS_9010 300ff65a5d7a445c8d473fa4424502c7 341 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 7 337 2.9E-47 T 14-10-2018 IPR005883 Type IV pilus assembly protein PilM AMIS_9010 300ff65a5d7a445c8d473fa4424502c7 341 SUPERFAMILY SSF53067 7 167 2.04E-13 T 14-10-2018 AMIS_9010 300ff65a5d7a445c8d473fa4424502c7 341 Pfam PF11104 Type IV pilus assembly protein PilM; 8 337 8.7E-48 T 14-10-2018 IPR005883 Type IV pilus assembly protein PilM AMIS_9010 300ff65a5d7a445c8d473fa4424502c7 341 PIRSF PIRSF019169 1 341 8.0E-78 T 14-10-2018 IPR005883 Type IV pilus assembly protein PilM AMIS_9010 300ff65a5d7a445c8d473fa4424502c7 341 Gene3D G3DSA:3.30.420.40 175 304 5.0E-74 T 14-10-2018 AMIS_8640 6af8f18b15d6cf9f3fd0b126d8624211 232 Pfam PF04493 Endonuclease V 19 208 3.6E-67 T 14-10-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 AMIS_8640 6af8f18b15d6cf9f3fd0b126d8624211 232 Gene3D G3DSA:3.30.2170.10 1 218 1.4E-78 T 14-10-2018 AMIS_8640 6af8f18b15d6cf9f3fd0b126d8624211 232 Hamap MF_00801 Endonuclease V [nfi]. 7 217 33.891 T 14-10-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 AMIS_14540 de68dc0a36910bb862fa5399d820124a 585 Gene3D G3DSA:3.20.20.300 3 397 3.6E-107 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 AMIS_14540 de68dc0a36910bb862fa5399d820124a 585 Gene3D G3DSA:3.40.50.1700 398 585 3.0E-10 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 AMIS_14540 de68dc0a36910bb862fa5399d820124a 585 SUPERFAMILY SSF52279 435 584 1.83E-16 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 AMIS_14540 de68dc0a36910bb862fa5399d820124a 585 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 435 584 3.4E-9 T 14-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 AMIS_14540 de68dc0a36910bb862fa5399d820124a 585 PRINTS PR00133 Glycosyl hydrolase family 3 signature 212 228 6.3E-13 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMIS_14540 de68dc0a36910bb862fa5399d820124a 585 PRINTS PR00133 Glycosyl hydrolase family 3 signature 130 149 6.3E-13 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMIS_14540 de68dc0a36910bb862fa5399d820124a 585 PRINTS PR00133 Glycosyl hydrolase family 3 signature 99 115 6.3E-13 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMIS_14540 de68dc0a36910bb862fa5399d820124a 585 PRINTS PR00133 Glycosyl hydrolase family 3 signature 291 309 6.3E-13 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMIS_14540 de68dc0a36910bb862fa5399d820124a 585 SUPERFAMILY SSF51445 6 416 7.69E-85 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_14540 de68dc0a36910bb862fa5399d820124a 585 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 60 378 7.1E-44 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMIS_8270 78a7b7f565003d5dd2deef58f24534ef 861 Gene3D G3DSA:1.50.10.10 108 851 8.0E-274 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 AMIS_8270 78a7b7f565003d5dd2deef58f24534ef 861 SUPERFAMILY SSF48208 411 826 6.8E-45 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AMIS_8270 78a7b7f565003d5dd2deef58f24534ef 861 Pfam PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain 415 761 2.2E-110 T 14-10-2018 IPR035396 Alpha-L-rhamnosidase, six-hairpin glycosidase domain AMIS_8270 78a7b7f565003d5dd2deef58f24534ef 861 Pfam PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain 311 410 1.5E-30 T 14-10-2018 IPR008902 Alpha-L-rhamnosidase, concanavalin-like domain AMIS_8270 78a7b7f565003d5dd2deef58f24534ef 861 PIRSF PIRSF010631 1 846 1.3E-235 T 14-10-2018 IPR016007 Alpha-L-rhamnosidase AMIS_8270 78a7b7f565003d5dd2deef58f24534ef 861 Pfam PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain 763 836 9.6E-20 T 14-10-2018 IPR035398 Alpha-L-rhamnosidase C-terminal domain AMIS_8270 78a7b7f565003d5dd2deef58f24534ef 861 Pfam PF08531 Alpha-L-rhamnosidase N-terminal domain 146 284 2.0E-51 T 14-10-2018 IPR013737 Bacterial alpha-L-rhamnosidase N-terminal AMIS_8270 78a7b7f565003d5dd2deef58f24534ef 861 Gene3D G3DSA:2.60.40.10 7 107 4.0E-21 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_27610 daf4cd63beb6a72c7148770e4a140f14 282 SUPERFAMILY SSF110710 8 278 1.6E-82 T 14-10-2018 IPR028345 Aminoglycoside 3-N-acetyltransferase-like AMIS_27610 daf4cd63beb6a72c7148770e4a140f14 282 Pfam PF02522 Aminoglycoside 3-N-acetyltransferase 35 277 3.4E-73 T 14-10-2018 IPR003679 Aminoglycoside N(3)-acetyltransferase GO:0046353|GO:0046677 AMIS_8100 32241d194485ee8d1e0d71f38f2c67bf 688 Pfam PF03190 Protein of unknown function, DUF255 2 155 5.5E-68 T 14-10-2018 IPR004879 Domain of unknown function DUF255 AMIS_8100 32241d194485ee8d1e0d71f38f2c67bf 688 SUPERFAMILY SSF52833 2 123 5.1E-28 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMIS_8100 32241d194485ee8d1e0d71f38f2c67bf 688 Gene3D G3DSA:1.50.10.10 203 331 1.8E-5 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 AMIS_8100 32241d194485ee8d1e0d71f38f2c67bf 688 Gene3D G3DSA:3.40.30.10 1 160 6.5E-62 T 14-10-2018 AMIS_8100 32241d194485ee8d1e0d71f38f2c67bf 688 Pfam PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) 484 517 0.03 T 14-10-2018 AMIS_8100 32241d194485ee8d1e0d71f38f2c67bf 688 PIRSF PIRSF006402 1 688 2.5E-195 T 14-10-2018 IPR024705 Spermatogenesis-associated protein 20 AMIS_8100 32241d194485ee8d1e0d71f38f2c67bf 688 SUPERFAMILY SSF48208 182 545 7.48E-68 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AMIS_24230 2c1f338402bf58072761f7f5e10ebe2a 462 SMART SM00267 290 455 2.9E-42 T 14-10-2018 IPR000160 GGDEF domain AMIS_24230 2c1f338402bf58072761f7f5e10ebe2a 462 Pfam PF00990 Diguanylate cyclase, GGDEF domain 301 447 1.2E-32 T 14-10-2018 IPR000160 GGDEF domain AMIS_24230 2c1f338402bf58072761f7f5e10ebe2a 462 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 297 449 4.5E-33 T 14-10-2018 IPR000160 GGDEF domain AMIS_24230 2c1f338402bf58072761f7f5e10ebe2a 462 SUPERFAMILY SSF55073 306 449 2.43E-35 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_24230 2c1f338402bf58072761f7f5e10ebe2a 462 Gene3D G3DSA:3.30.70.270 287 453 3.8E-43 T 14-10-2018 AMIS_44050 fd069bf282981029ca52d4a42128b2f3 539 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 24 247 1.9E-15 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AMIS_44050 fd069bf282981029ca52d4a42128b2f3 539 SUPERFAMILY SSF53067 24 248 2.67E-28 T 14-10-2018 AMIS_44050 fd069bf282981029ca52d4a42128b2f3 539 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 284 481 1.4E-25 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AMIS_44050 fd069bf282981029ca52d4a42128b2f3 539 SUPERFAMILY SSF53067 283 527 7.77E-11 T 14-10-2018 AMIS_44050 fd069bf282981029ca52d4a42128b2f3 539 Gene3D G3DSA:3.30.420.40 21 271 7.8E-36 T 14-10-2018 AMIS_44050 fd069bf282981029ca52d4a42128b2f3 539 Gene3D G3DSA:3.30.420.40 272 538 1.7E-15 T 14-10-2018 AMIS_81130 a0889b39b6c2fa53b89156991190c66b 383 SUPERFAMILY SSF47090 85 143 5.23E-17 T 14-10-2018 IPR036365 PGBD-like superfamily AMIS_81130 a0889b39b6c2fa53b89156991190c66b 383 Gene3D G3DSA:1.10.101.10 85 149 3.6E-19 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 AMIS_81130 a0889b39b6c2fa53b89156991190c66b 383 Pfam PF01471 Putative peptidoglycan binding domain 87 142 1.2E-15 T 14-10-2018 IPR002477 Peptidoglycan binding-like AMIS_81130 a0889b39b6c2fa53b89156991190c66b 383 Pfam PF01471 Putative peptidoglycan binding domain 10 65 4.0E-10 T 14-10-2018 IPR002477 Peptidoglycan binding-like AMIS_81130 a0889b39b6c2fa53b89156991190c66b 383 Gene3D G3DSA:3.40.630.40 171 359 2.0E-38 T 14-10-2018 AMIS_81130 a0889b39b6c2fa53b89156991190c66b 383 SUPERFAMILY SSF47090 3 65 1.49E-13 T 14-10-2018 IPR036365 PGBD-like superfamily AMIS_81130 a0889b39b6c2fa53b89156991190c66b 383 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 175 355 6.3E-34 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AMIS_81130 a0889b39b6c2fa53b89156991190c66b 383 SUPERFAMILY SSF53187 172 358 1.44E-37 T 14-10-2018 AMIS_81130 a0889b39b6c2fa53b89156991190c66b 383 SMART SM00646 240 355 8.6E-29 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AMIS_81130 a0889b39b6c2fa53b89156991190c66b 383 Gene3D G3DSA:1.10.101.10 1 69 1.9E-15 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 AMIS_78180 e60b705e48ae0c4e790a843ee7e9ee23 225 Pfam PF13545 Crp-like helix-turn-helix domain 148 221 1.8E-16 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMIS_78180 e60b705e48ae0c4e790a843ee7e9ee23 225 SMART SM00100 10 128 2.6E-26 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain AMIS_78180 e60b705e48ae0c4e790a843ee7e9ee23 225 SMART SM00419 167 215 2.8E-11 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMIS_78180 e60b705e48ae0c4e790a843ee7e9ee23 225 SUPERFAMILY SSF46785 145 223 1.87E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_78180 e60b705e48ae0c4e790a843ee7e9ee23 225 SUPERFAMILY SSF51206 4 142 6.42E-37 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like AMIS_78180 e60b705e48ae0c4e790a843ee7e9ee23 225 Gene3D G3DSA:2.60.120.10 1 146 6.1E-48 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMIS_78180 e60b705e48ae0c4e790a843ee7e9ee23 225 Gene3D G3DSA:1.10.10.10 147 224 7.1E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_78180 e60b705e48ae0c4e790a843ee7e9ee23 225 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 78 95 - T 14-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site AMIS_78180 e60b705e48ae0c4e790a843ee7e9ee23 225 Pfam PF00027 Cyclic nucleotide-binding domain 30 111 1.7E-23 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain AMIS_7960 4b3593316412782447d9a6006a244878 72 SUPERFAMILY SSF46785 3 71 1.33E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_7960 4b3593316412782447d9a6006a244878 72 Gene3D G3DSA:1.10.10.10 6 72 8.9E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_7960 4b3593316412782447d9a6006a244878 72 SMART SM00345 10 69 3.2E-12 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_7960 4b3593316412782447d9a6006a244878 72 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 69 4.0E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_38520 7b2547637806ece6ad1caca00a3f71da 445 Gene3D G3DSA:1.20.1250.20 8 224 1.7E-62 T 14-10-2018 AMIS_38520 7b2547637806ece6ad1caca00a3f71da 445 SUPERFAMILY SSF103473 22 440 1.05E-42 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_38520 7b2547637806ece6ad1caca00a3f71da 445 Gene3D G3DSA:1.20.1250.20 225 444 1.9E-67 T 14-10-2018 AMIS_38520 7b2547637806ece6ad1caca00a3f71da 445 Pfam PF07690 Major Facilitator Superfamily 52 397 1.2E-20 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_62800 2ef68254216689145df8e9a5aec33343 347 SMART SM00382 51 182 5.7E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_62800 2ef68254216689145df8e9a5aec33343 347 Gene3D G3DSA:1.10.8.60 182 256 8.0E-30 T 14-10-2018 AMIS_62800 2ef68254216689145df8e9a5aec33343 347 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 347 157.204 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 AMIS_62800 2ef68254216689145df8e9a5aec33343 347 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 4 235 2.6E-105 T 14-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 AMIS_62800 2ef68254216689145df8e9a5aec33343 347 Gene3D G3DSA:1.10.10.10 257 334 5.7E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_62800 2ef68254216689145df8e9a5aec33343 347 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 253 326 1.5E-30 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 AMIS_62800 2ef68254216689145df8e9a5aec33343 347 Gene3D G3DSA:3.40.50.300 20 181 3.1E-35 T 14-10-2018 AMIS_62800 2ef68254216689145df8e9a5aec33343 347 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 270 326 3.0E-19 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 AMIS_62800 2ef68254216689145df8e9a5aec33343 347 SUPERFAMILY SSF52540 20 251 3.08E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_62800 2ef68254216689145df8e9a5aec33343 347 SUPERFAMILY SSF46785 256 330 4.22E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_62800 2ef68254216689145df8e9a5aec33343 347 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 23 326 4.0E-133 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 AMIS_40080 f2a12fe1bd4e1f2bdfa97ec2a16e30cb 224 SUPERFAMILY SSF52266 24 220 6.0E-25 T 14-10-2018 AMIS_40080 f2a12fe1bd4e1f2bdfa97ec2a16e30cb 224 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 30 214 4.6E-18 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain AMIS_40080 f2a12fe1bd4e1f2bdfa97ec2a16e30cb 224 Gene3D G3DSA:3.40.50.1110 19 223 7.8E-24 T 14-10-2018 IPR036514 SGNH hydrolase superfamily AMIS_55960 db4e5b29e08c59057137d438a0e49707 234 PIRSF PIRSF036625 1 234 2.8E-51 T 14-10-2018 IPR012074 GAF-ANTAR transcription anti-termination regulator, putative AMIS_55960 db4e5b29e08c59057137d438a0e49707 234 Gene3D G3DSA:1.10.10.10 176 233 3.4E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_55960 db4e5b29e08c59057137d438a0e49707 234 Gene3D G3DSA:3.30.450.40 6 175 3.4E-26 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_55960 db4e5b29e08c59057137d438a0e49707 234 Pfam PF03861 ANTAR domain 176 228 1.8E-19 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 AMIS_55960 db4e5b29e08c59057137d438a0e49707 234 SMART SM01012 173 228 1.1E-21 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 AMIS_55960 db4e5b29e08c59057137d438a0e49707 234 SUPERFAMILY SSF52172 168 227 4.17E-7 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_55960 db4e5b29e08c59057137d438a0e49707 234 SMART SM00065 24 171 5.8E-4 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_55960 db4e5b29e08c59057137d438a0e49707 234 SUPERFAMILY SSF55781 24 172 1.79E-21 T 14-10-2018 AMIS_55960 db4e5b29e08c59057137d438a0e49707 234 Pfam PF13185 GAF domain 23 161 1.5E-9 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_24530 f21805abe94a5b39509b9a8252f545fb 763 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 93 142 5.5E-15 T 14-10-2018 IPR004176 Clp, N-terminal AMIS_24530 f21805abe94a5b39509b9a8252f545fb 763 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 16 68 2.8E-18 T 14-10-2018 IPR004176 Clp, N-terminal AMIS_24530 f21805abe94a5b39509b9a8252f545fb 763 Gene3D G3DSA:1.10.8.60 664 760 4.4E-28 T 14-10-2018 AMIS_24530 f21805abe94a5b39509b9a8252f545fb 763 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 209 328 2.8E-13 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMIS_24530 f21805abe94a5b39509b9a8252f545fb 763 SUPERFAMILY SSF52540 167 411 8.99E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_24530 f21805abe94a5b39509b9a8252f545fb 763 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 535 553 1.1E-39 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 AMIS_24530 f21805abe94a5b39509b9a8252f545fb 763 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 597 611 1.1E-39 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 AMIS_24530 f21805abe94a5b39509b9a8252f545fb 763 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 490 508 1.1E-39 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 AMIS_24530 f21805abe94a5b39509b9a8252f545fb 763 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 564 582 1.1E-39 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 AMIS_24530 f21805abe94a5b39509b9a8252f545fb 763 SUPERFAMILY SSF52540 435 753 2.04E-79 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_24530 f21805abe94a5b39509b9a8252f545fb 763 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 664 744 2.4E-25 T 14-10-2018 IPR019489 Clp ATPase, C-terminal AMIS_24530 f21805abe94a5b39509b9a8252f545fb 763 Gene3D G3DSA:3.40.50.300 159 346 9.2E-71 T 14-10-2018 AMIS_24530 f21805abe94a5b39509b9a8252f545fb 763 SMART SM01086 664 753 9.3E-39 T 14-10-2018 IPR019489 Clp ATPase, C-terminal AMIS_24530 f21805abe94a5b39509b9a8252f545fb 763 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 299 311 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 AMIS_24530 f21805abe94a5b39509b9a8252f545fb 763 Gene3D G3DSA:1.10.8.60 347 439 4.2E-35 T 14-10-2018 AMIS_24530 f21805abe94a5b39509b9a8252f545fb 763 Gene3D G3DSA:1.10.1780.10 1 147 1.9E-60 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AMIS_24530 f21805abe94a5b39509b9a8252f545fb 763 SMART SM00382 204 348 4.4E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_24530 f21805abe94a5b39509b9a8252f545fb 763 SMART SM00382 486 665 2.4E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_24530 f21805abe94a5b39509b9a8252f545fb 763 Gene3D G3DSA:3.40.50.300 440 663 4.3E-84 T 14-10-2018 AMIS_24530 f21805abe94a5b39509b9a8252f545fb 763 Pfam PF07724 AAA domain (Cdc48 subfamily) 485 657 4.2E-50 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMIS_24530 f21805abe94a5b39509b9a8252f545fb 763 SUPERFAMILY SSF81923 3 137 6.34E-29 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AMIS_11320 e70889e73e69bad6eb57700d9867c498 704 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 589 696 4.8E-9 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMIS_11320 e70889e73e69bad6eb57700d9867c498 704 Gene3D G3DSA:3.10.180.10 584 703 2.4E-21 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_11320 e70889e73e69bad6eb57700d9867c498 704 SUPERFAMILY SSF54593 589 701 4.97E-23 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_67380 a27385881b43b1bd0ff70dbd4b34ef60 181 SMART SM00900 104 179 1.9E-8 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 AMIS_67380 a27385881b43b1bd0ff70dbd4b34ef60 181 Pfam PF04205 FMN-binding domain 106 176 2.1E-5 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 AMIS_67380 a27385881b43b1bd0ff70dbd4b34ef60 181 Gene3D G3DSA:3.90.1010.20 122 181 8.1E-6 T 14-10-2018 AMIS_32430 433b1fc40d3d84bb59380a5c41eee091 488 Gene3D G3DSA:3.50.50.60 6 380 2.5E-140 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_32430 433b1fc40d3d84bb59380a5c41eee091 488 Gene3D G3DSA:3.30.9.100 42 287 2.5E-140 T 14-10-2018 AMIS_32430 433b1fc40d3d84bb59380a5c41eee091 488 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 160 175 4.4E-8 T 14-10-2018 AMIS_32430 433b1fc40d3d84bb59380a5c41eee091 488 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 4.4E-8 T 14-10-2018 AMIS_32430 433b1fc40d3d84bb59380a5c41eee091 488 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 311 4.4E-8 T 14-10-2018 AMIS_32430 433b1fc40d3d84bb59380a5c41eee091 488 SUPERFAMILY SSF51905 6 383 3.04E-47 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_32430 433b1fc40d3d84bb59380a5c41eee091 488 Pfam PF04820 Tryptophan halogenase 7 94 1.0E-19 T 14-10-2018 IPR006905 Flavin-dependent halogenase AMIS_32430 433b1fc40d3d84bb59380a5c41eee091 488 Pfam PF04820 Tryptophan halogenase 100 425 4.2E-58 T 14-10-2018 IPR006905 Flavin-dependent halogenase AMIS_37990 b792d93c1f6c761ac76619fc5f9e7f90 388 Gene3D G3DSA:1.10.540.10 10 128 5.3E-32 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMIS_37990 b792d93c1f6c761ac76619fc5f9e7f90 388 SUPERFAMILY SSF56645 12 252 2.23E-74 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMIS_37990 b792d93c1f6c761ac76619fc5f9e7f90 388 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 16 126 3.2E-28 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMIS_37990 b792d93c1f6c761ac76619fc5f9e7f90 388 Gene3D G3DSA:1.20.140.10 246 388 1.4E-45 T 14-10-2018 AMIS_37990 b792d93c1f6c761ac76619fc5f9e7f90 388 SUPERFAMILY SSF47203 239 388 4.51E-48 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMIS_37990 b792d93c1f6c761ac76619fc5f9e7f90 388 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 130 226 1.2E-21 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMIS_37990 b792d93c1f6c761ac76619fc5f9e7f90 388 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 242 388 2.0E-42 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMIS_37990 b792d93c1f6c761ac76619fc5f9e7f90 388 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 132 144 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AMIS_37990 b792d93c1f6c761ac76619fc5f9e7f90 388 Gene3D G3DSA:2.40.110.10 129 245 1.0E-34 T 14-10-2018 AMIS_37990 b792d93c1f6c761ac76619fc5f9e7f90 388 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 347 366 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AMIS_47230 9a6ea1905c70b28f5637468845e0ec68 270 Gene3D G3DSA:1.10.3720.10 62 264 3.0E-18 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_47230 9a6ea1905c70b28f5637468845e0ec68 270 SUPERFAMILY SSF161098 71 251 1.96E-20 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_47230 9a6ea1905c70b28f5637468845e0ec68 270 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 265 5.3E-26 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_27790 9d7c862e6715aefd2d6c3c675205d170 741 Gene3D G3DSA:2.60.120.260 45 171 1.2E-37 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_27790 9d7c862e6715aefd2d6c3c675205d170 741 SUPERFAMILY SSF51126 446 643 1.17E-6 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor AMIS_27790 9d7c862e6715aefd2d6c3c675205d170 741 Pfam PF00754 F5/8 type C domain 54 166 2.2E-25 T 14-10-2018 IPR000421 Coagulation factor 5/8 C-terminal domain AMIS_27790 9d7c862e6715aefd2d6c3c675205d170 741 Gene3D G3DSA:2.160.20.10 445 707 4.3E-11 T 14-10-2018 IPR012334 Pectin lyase fold AMIS_27790 9d7c862e6715aefd2d6c3c675205d170 741 SUPERFAMILY SSF49785 53 171 1.21E-30 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_73410 6d71a93d87d705db305e8fc68289b161 359 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 46 339 1.6E-59 T 14-10-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 AMIS_73410 6d71a93d87d705db305e8fc68289b161 359 Gene3D G3DSA:3.40.190.10 229 348 3.7E-7 T 14-10-2018 AMIS_73410 6d71a93d87d705db305e8fc68289b161 359 Pfam PF13379 NMT1-like family 40 280 2.5E-36 T 14-10-2018 AMIS_73410 6d71a93d87d705db305e8fc68289b161 359 Gene3D G3DSA:3.40.190.10 43 135 5.7E-11 T 14-10-2018 AMIS_73410 6d71a93d87d705db305e8fc68289b161 359 Gene3D G3DSA:3.40.190.10 136 228 1.4E-19 T 14-10-2018 AMIS_73410 6d71a93d87d705db305e8fc68289b161 359 SUPERFAMILY SSF53850 43 275 4.0E-42 T 14-10-2018 AMIS_46720 511d0f47bb8ee373652e6612cbc24270 441 Pfam PF03315 Serine dehydratase beta chain 6 144 2.2E-46 T 14-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 AMIS_46720 511d0f47bb8ee373652e6612cbc24270 441 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 5 438 8.5E-191 T 14-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 AMIS_46720 511d0f47bb8ee373652e6612cbc24270 441 Gene3D G3DSA:3.30.1330.90 13 148 1.0E-41 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 AMIS_46720 511d0f47bb8ee373652e6612cbc24270 441 SUPERFAMILY SSF143548 19 143 1.49E-35 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 AMIS_46720 511d0f47bb8ee373652e6612cbc24270 441 Pfam PF03313 Serine dehydratase alpha chain 174 435 3.7E-102 T 14-10-2018 IPR005130 Serine dehydratase-like, alpha subunit AMIS_33440 3129ae3818356dabfa8be94133af7c20 249 Gene3D G3DSA:3.40.50.1820 3 249 1.3E-24 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_33440 3129ae3818356dabfa8be94133af7c20 249 SUPERFAMILY SSF53474 16 246 2.36E-19 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_33440 3129ae3818356dabfa8be94133af7c20 249 Pfam PF00756 Putative esterase 91 247 1.1E-10 T 14-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 AMIS_42120 1f7ea574ac59bdce52a71f026f233965 528 Pfam PF13193 AMP-binding enzyme C-terminal domain 442 517 2.7E-19 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AMIS_42120 1f7ea574ac59bdce52a71f026f233965 528 ProSitePatterns PS00455 Putative AMP-binding domain signature. 190 201 - T 14-10-2018 IPR020845 AMP-binding, conserved site AMIS_42120 1f7ea574ac59bdce52a71f026f233965 528 Gene3D G3DSA:3.40.50.12780 29 424 4.4E-74 T 14-10-2018 AMIS_42120 1f7ea574ac59bdce52a71f026f233965 528 Gene3D G3DSA:3.30.300.310 429 526 2.7E-30 T 14-10-2018 AMIS_42120 1f7ea574ac59bdce52a71f026f233965 528 SUPERFAMILY SSF56801 27 524 5.23E-114 T 14-10-2018 AMIS_42120 1f7ea574ac59bdce52a71f026f233965 528 Pfam PF00501 AMP-binding enzyme 46 433 6.4E-65 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMIS_16360 1560f5d685e5238bd1c4033fbe84396c 229 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 221 1.1E-38 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AMIS_16360 1560f5d685e5238bd1c4033fbe84396c 229 SUPERFAMILY SSF53254 3 227 4.98E-47 T 14-10-2018 IPR029033 Histidine phosphatase superfamily AMIS_16360 1560f5d685e5238bd1c4033fbe84396c 229 Gene3D G3DSA:3.40.50.1240 1 227 2.2E-44 T 14-10-2018 IPR029033 Histidine phosphatase superfamily AMIS_16360 1560f5d685e5238bd1c4033fbe84396c 229 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 7 16 - T 14-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 AMIS_16360 1560f5d685e5238bd1c4033fbe84396c 229 PIRSF PIRSF000709 4 197 1.3E-12 T 14-10-2018 AMIS_16360 1560f5d685e5238bd1c4033fbe84396c 229 SMART SM00855 4 178 3.5E-17 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AMIS_26060 ec5fc0212d5129244dc6c1156a240b4f 176 SUPERFAMILY SSF88659 96 157 1.42E-16 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_26060 ec5fc0212d5129244dc6c1156a240b4f 176 Gene3D G3DSA:1.10.10.10 76 162 2.4E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_26060 ec5fc0212d5129244dc6c1156a240b4f 176 Pfam PF08281 Sigma-70, region 4 101 152 5.6E-18 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_26060 ec5fc0212d5129244dc6c1156a240b4f 176 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 155 1.3E-16 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_26060 ec5fc0212d5129244dc6c1156a240b4f 176 SUPERFAMILY SSF88946 5 92 7.46E-8 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_26060 ec5fc0212d5129244dc6c1156a240b4f 176 TIGRFAM TIGR02983 SigE-fam_strep: RNA polymerase sigma-70 factor, sigma-E family 4 158 1.2E-42 T 14-10-2018 IPR014325 RNA polymerase sigma-E factor, actinobacteria GO:0016987 AMIS_26060 ec5fc0212d5129244dc6c1156a240b4f 176 Pfam PF04542 Sigma-70 region 2 20 73 6.8E-5 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_38170 311612ebb04436e6d1bd421f27c12f98 266 Gene3D G3DSA:3.40.50.150 2 266 8.5E-98 T 14-10-2018 AMIS_38170 311612ebb04436e6d1bd421f27c12f98 266 Pfam PF04672 S-adenosyl methyltransferase 4 265 2.2E-97 T 14-10-2018 IPR006764 S-adenosyl-L-methionine dependent methyltransferase, SAV2177 type AMIS_38170 311612ebb04436e6d1bd421f27c12f98 266 PIRSF PIRSF017393 1 266 3.8E-96 T 14-10-2018 IPR006764 S-adenosyl-L-methionine dependent methyltransferase, SAV2177 type AMIS_38170 311612ebb04436e6d1bd421f27c12f98 266 SUPERFAMILY SSF53335 12 246 2.48E-38 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_23890 81f1e649fffbbbf7d43a82b6f2450a3b 1802 SUPERFAMILY SSF52096 1490 1799 3.05E-37 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMIS_23890 81f1e649fffbbbf7d43a82b6f2450a3b 1802 SUPERFAMILY SSF52096 1233 1466 7.82E-21 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMIS_23890 81f1e649fffbbbf7d43a82b6f2450a3b 1802 SUPERFAMILY SSF56059 74 317 2.3E-60 T 14-10-2018 AMIS_23890 81f1e649fffbbbf7d43a82b6f2450a3b 1802 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 106 314 2.8E-62 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMIS_23890 81f1e649fffbbbf7d43a82b6f2450a3b 1802 SUPERFAMILY SSF52440 2 104 2.69E-25 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AMIS_23890 81f1e649fffbbbf7d43a82b6f2450a3b 1802 Gene3D G3DSA:3.90.226.10 1235 1481 1.2E-35 T 14-10-2018 AMIS_23890 81f1e649fffbbbf7d43a82b6f2450a3b 1802 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 278 285 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMIS_23890 81f1e649fffbbbf7d43a82b6f2450a3b 1802 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 144 158 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMIS_23890 81f1e649fffbbbf7d43a82b6f2450a3b 1802 Pfam PF08326 Acetyl-CoA carboxylase, central region 1010 1120 6.1E-15 T 14-10-2018 IPR013537 Acetyl-CoA carboxylase, central domain GO:0003989|GO:0005524|GO:0006633 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-7388|Reactome: R-HSA-163765|Reactome: R-HSA-196780|Reactome: R-HSA-200425|Reactome: R-HSA-2426168 AMIS_23890 81f1e649fffbbbf7d43a82b6f2450a3b 1802 Pfam PF00364 Biotin-requiring enzyme 575 640 1.8E-12 T 14-10-2018 IPR000089 Biotin/lipoyl attachment AMIS_23890 81f1e649fffbbbf7d43a82b6f2450a3b 1802 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 101 5.3E-25 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AMIS_23890 81f1e649fffbbbf7d43a82b6f2450a3b 1802 Pfam PF01039 Carboxyl transferase domain 1308 1798 3.4E-32 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 AMIS_23890 81f1e649fffbbbf7d43a82b6f2450a3b 1802 Pfam PF02785 Biotin carboxylase C-terminal domain 326 435 2.1E-34 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AMIS_23890 81f1e649fffbbbf7d43a82b6f2450a3b 1802 Gene3D G3DSA:2.40.50.100 568 641 7.1E-17 T 14-10-2018 AMIS_23890 81f1e649fffbbbf7d43a82b6f2450a3b 1802 Gene3D G3DSA:3.90.226.10 1490 1802 4.8E-58 T 14-10-2018 AMIS_23890 81f1e649fffbbbf7d43a82b6f2450a3b 1802 SMART SM00878 326 434 2.9E-48 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AMIS_23890 81f1e649fffbbbf7d43a82b6f2450a3b 1802 SUPERFAMILY SSF51230 566 641 2.49E-16 T 14-10-2018 IPR011053 Single hybrid motif AMIS_23890 81f1e649fffbbbf7d43a82b6f2450a3b 1802 SUPERFAMILY SSF51246 321 436 4.87E-35 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AMIS_23890 81f1e649fffbbbf7d43a82b6f2450a3b 1802 Gene3D G3DSA:3.30.470.130 1 438 2.2E-162 T 14-10-2018 AMIS_30240 5116bd4a5622eaac195e1103d409ef58 164 Pfam PF04542 Sigma-70 region 2 9 72 8.6E-8 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_30240 5116bd4a5622eaac195e1103d409ef58 164 SUPERFAMILY SSF88946 3 80 8.63E-13 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_30240 5116bd4a5622eaac195e1103d409ef58 164 SUPERFAMILY SSF88659 97 153 1.53E-14 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_30240 5116bd4a5622eaac195e1103d409ef58 164 Gene3D G3DSA:1.10.10.10 80 155 1.3E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_30240 5116bd4a5622eaac195e1103d409ef58 164 Pfam PF08281 Sigma-70, region 4 97 149 1.5E-15 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_30240 5116bd4a5622eaac195e1103d409ef58 164 TIGRFAM TIGR02983 SigE-fam_strep: RNA polymerase sigma-70 factor, sigma-E family 2 154 2.0E-43 T 14-10-2018 IPR014325 RNA polymerase sigma-E factor, actinobacteria GO:0016987 AMIS_30240 5116bd4a5622eaac195e1103d409ef58 164 Gene3D G3DSA:1.10.1740.10 1 74 9.6E-11 T 14-10-2018 AMIS_30240 5116bd4a5622eaac195e1103d409ef58 164 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 3 153 1.2E-17 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_79390 8ffa0e749cfff4ddb6d3947c643bcb4b 184 SUPERFAMILY SSF88659 103 164 7.41E-11 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_79390 8ffa0e749cfff4ddb6d3947c643bcb4b 184 Pfam PF04542 Sigma-70 region 2 23 76 2.6E-5 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_79390 8ffa0e749cfff4ddb6d3947c643bcb4b 184 Pfam PF08281 Sigma-70, region 4 107 159 2.2E-9 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_79390 8ffa0e749cfff4ddb6d3947c643bcb4b 184 Gene3D G3DSA:1.10.1740.10 4 76 1.5E-8 T 14-10-2018 AMIS_79390 8ffa0e749cfff4ddb6d3947c643bcb4b 184 SUPERFAMILY SSF88946 7 98 2.55E-12 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_79390 8ffa0e749cfff4ddb6d3947c643bcb4b 184 Gene3D G3DSA:1.10.10.10 85 168 3.1E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_79390 8ffa0e749cfff4ddb6d3947c643bcb4b 184 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 162 5.0E-13 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_60470 2162ec4afb1fe976f71caade9bd48745 70 SMART SM00530 6 62 9.4E-5 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMIS_60470 2162ec4afb1fe976f71caade9bd48745 70 SUPERFAMILY SSF47413 1 68 2.72E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_60470 2162ec4afb1fe976f71caade9bd48745 70 Gene3D G3DSA:1.10.260.40 4 68 1.6E-7 T 14-10-2018 AMIS_60470 2162ec4afb1fe976f71caade9bd48745 70 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 6 68 5.7E-18 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMIS_78030 2baa5c8790826dc324524bce9dd49ebd 208 Gene3D G3DSA:3.30.1130.10 73 208 4.8E-57 T 14-10-2018 AMIS_78030 2baa5c8790826dc324524bce9dd49ebd 208 SUPERFAMILY SSF55620 16 206 1.56E-75 T 14-10-2018 AMIS_78030 2baa5c8790826dc324524bce9dd49ebd 208 Pfam PF01227 GTP cyclohydrolase I 27 205 1.3E-75 T 14-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AMIS_78030 2baa5c8790826dc324524bce9dd49ebd 208 Gene3D G3DSA:1.10.286.10 14 71 2.8E-20 T 14-10-2018 AMIS_78030 2baa5c8790826dc324524bce9dd49ebd 208 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 27 206 5.4E-69 T 14-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AMIS_78030 2baa5c8790826dc324524bce9dd49ebd 208 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 83 99 - T 14-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AMIS_78030 2baa5c8790826dc324524bce9dd49ebd 208 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 133 143 - T 14-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AMIS_78030 2baa5c8790826dc324524bce9dd49ebd 208 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 23 206 40.869 T 14-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AMIS_35460 4866a7f21becb235fdde91b568d7248a 585 Gene3D G3DSA:3.40.50.300 343 584 8.2E-67 T 14-10-2018 AMIS_35460 4866a7f21becb235fdde91b568d7248a 585 SUPERFAMILY SSF90123 17 327 6.28E-58 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMIS_35460 4866a7f21becb235fdde91b568d7248a 585 Gene3D G3DSA:1.20.1560.10 9 332 1.6E-55 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMIS_35460 4866a7f21becb235fdde91b568d7248a 585 Pfam PF00664 ABC transporter transmembrane region 32 300 1.0E-32 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AMIS_35460 4866a7f21becb235fdde91b568d7248a 585 Pfam PF00005 ABC transporter 363 508 3.7E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_35460 4866a7f21becb235fdde91b568d7248a 585 SMART SM00382 372 554 2.0E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_35460 4866a7f21becb235fdde91b568d7248a 585 SUPERFAMILY SSF52540 344 577 8.98E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_63420 9d8e880e92285653b3fa9aa0a4ea2c0c 425 Pfam PF07730 Histidine kinase 217 280 5.5E-14 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMIS_63420 9d8e880e92285653b3fa9aa0a4ea2c0c 425 SUPERFAMILY SSF55874 284 412 2.29E-17 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_63420 9d8e880e92285653b3fa9aa0a4ea2c0c 425 Gene3D G3DSA:3.30.565.10 282 413 1.3E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_63420 9d8e880e92285653b3fa9aa0a4ea2c0c 425 PIRSF PIRSF037434 3 416 1.4E-62 T 14-10-2018 IPR017205 Signal transduction histidine kinase, ChrS AMIS_63420 9d8e880e92285653b3fa9aa0a4ea2c0c 425 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 322 412 2.9E-5 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_15720 e82c2c6632079c1185e81a68add014e0 489 SUPERFAMILY SSF46548 5 153 2.88E-38 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AMIS_15720 e82c2c6632079c1185e81a68add014e0 489 SUPERFAMILY SSF51971 335 470 1.77E-12 T 14-10-2018 AMIS_15720 e82c2c6632079c1185e81a68add014e0 489 PRINTS PR00419 Adrenodoxin reductase family signature 284 298 1.1E-23 T 14-10-2018 AMIS_15720 e82c2c6632079c1185e81a68add014e0 489 PRINTS PR00419 Adrenodoxin reductase family signature 209 219 1.1E-23 T 14-10-2018 AMIS_15720 e82c2c6632079c1185e81a68add014e0 489 PRINTS PR00419 Adrenodoxin reductase family signature 167 180 1.1E-23 T 14-10-2018 AMIS_15720 e82c2c6632079c1185e81a68add014e0 489 PRINTS PR00419 Adrenodoxin reductase family signature 144 166 1.1E-23 T 14-10-2018 AMIS_15720 e82c2c6632079c1185e81a68add014e0 489 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 477 5.4E-186 T 14-10-2018 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 AMIS_15720 e82c2c6632079c1185e81a68add014e0 489 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 144 459 2.3E-28 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMIS_15720 e82c2c6632079c1185e81a68add014e0 489 Gene3D G3DSA:1.10.1060.10 9 140 1.8E-22 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AMIS_15720 e82c2c6632079c1185e81a68add014e0 489 Gene3D G3DSA:3.50.50.60 141 268 3.2E-34 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_15720 e82c2c6632079c1185e81a68add014e0 489 Gene3D G3DSA:3.50.50.60 279 473 8.1E-17 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_15720 e82c2c6632079c1185e81a68add014e0 489 SUPERFAMILY SSF51971 142 404 1.71E-64 T 14-10-2018 AMIS_15720 e82c2c6632079c1185e81a68add014e0 489 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 24 127 1.3E-23 T 14-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 AMIS_9850 7f5ea877591075fac6117dbb1dd72e45 345 Pfam PF00067 Cytochrome P450 131 313 2.4E-22 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_9850 7f5ea877591075fac6117dbb1dd72e45 345 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 287 296 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 AMIS_9850 7f5ea877591075fac6117dbb1dd72e45 345 Gene3D G3DSA:1.10.630.10 1 345 9.0E-133 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_9850 7f5ea877591075fac6117dbb1dd72e45 345 SUPERFAMILY SSF48264 25 345 7.6E-96 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_9850 7f5ea877591075fac6117dbb1dd72e45 345 PRINTS PR00359 B-class P450 signature 294 305 3.4E-62 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_9850 7f5ea877591075fac6117dbb1dd72e45 345 PRINTS PR00359 B-class P450 signature 37 48 3.4E-62 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_9850 7f5ea877591075fac6117dbb1dd72e45 345 PRINTS PR00359 B-class P450 signature 218 229 3.4E-62 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_9850 7f5ea877591075fac6117dbb1dd72e45 345 PRINTS PR00359 B-class P450 signature 83 99 3.4E-62 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_9850 7f5ea877591075fac6117dbb1dd72e45 345 PRINTS PR00359 B-class P450 signature 137 159 3.4E-62 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_9850 7f5ea877591075fac6117dbb1dd72e45 345 PRINTS PR00359 B-class P450 signature 236 263 3.4E-62 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_9850 7f5ea877591075fac6117dbb1dd72e45 345 PRINTS PR00359 B-class P450 signature 285 294 3.4E-62 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_9850 7f5ea877591075fac6117dbb1dd72e45 345 PRINTS PR00359 B-class P450 signature 100 115 3.4E-62 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_9850 7f5ea877591075fac6117dbb1dd72e45 345 PRINTS PR00359 B-class P450 signature 264 279 3.4E-62 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_25540 4424cbe9ced6c89efaa9d9d712f0313c 609 SUPERFAMILY SSF52242 66 151 1.96E-8 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 AMIS_25540 4424cbe9ced6c89efaa9d9d712f0313c 609 Pfam PF04055 Radical SAM superfamily 232 390 2.8E-15 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMIS_25540 4424cbe9ced6c89efaa9d9d712f0313c 609 Gene3D G3DSA:3.40.50.280 74 174 8.2E-11 T 14-10-2018 AMIS_25540 4424cbe9ced6c89efaa9d9d712f0313c 609 Pfam PF02310 B12 binding domain 20 163 1.4E-25 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 AMIS_25540 4424cbe9ced6c89efaa9d9d712f0313c 609 SUPERFAMILY SSF102114 204 431 2.88E-34 T 14-10-2018 AMIS_25540 4424cbe9ced6c89efaa9d9d712f0313c 609 SMART SM00729 227 441 2.6E-26 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AMIS_25540 4424cbe9ced6c89efaa9d9d712f0313c 609 Gene3D G3DSA:3.80.30.20 228 424 2.0E-17 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe AMIS_5260 2df029e72e460f83dce3633cb2933585 604 SUPERFAMILY SSF49384 427 522 1.33E-7 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 AMIS_5260 2df029e72e460f83dce3633cb2933585 604 ProSitePatterns PS00109 Tyrosine protein kinases specific active-site signature. 143 155 - T 14-10-2018 IPR008266 Tyrosine-protein kinase, active site GO:0004672|GO:0006468 AMIS_5260 2df029e72e460f83dce3633cb2933585 604 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 25 48 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 AMIS_5260 2df029e72e460f83dce3633cb2933585 604 SMART SM00637 432 522 7.8E-4 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 AMIS_5260 2df029e72e460f83dce3633cb2933585 604 Pfam PF00069 Protein kinase domain 19 274 1.8E-41 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMIS_5260 2df029e72e460f83dce3633cb2933585 604 Gene3D G3DSA:3.30.200.20 9 103 1.9E-29 T 14-10-2018 AMIS_5260 2df029e72e460f83dce3633cb2933585 604 SUPERFAMILY SSF56112 15 275 2.6E-67 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMIS_5260 2df029e72e460f83dce3633cb2933585 604 Gene3D G3DSA:2.60.40.290 426 524 1.3E-9 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 AMIS_5260 2df029e72e460f83dce3633cb2933585 604 Gene3D G3DSA:1.10.510.10 105 285 3.5E-45 T 14-10-2018 AMIS_72540 9c9f36cfb7614438312f0ff370a63fb5 428 Gene3D G3DSA:2.10.10.20 32 85 3.2E-17 T 14-10-2018 AMIS_72540 9c9f36cfb7614438312f0ff370a63fb5 428 SMART SM00495 35 81 6.3E-12 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AMIS_72540 9c9f36cfb7614438312f0ff370a63fb5 428 Gene3D G3DSA:3.20.20.80 133 427 3.1E-85 T 14-10-2018 AMIS_72540 9c9f36cfb7614438312f0ff370a63fb5 428 ProSitePatterns PS01095 Chitinases family 18 active site. 245 253 - T 14-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AMIS_72540 9c9f36cfb7614438312f0ff370a63fb5 428 SUPERFAMILY SSF51445 132 416 1.9E-58 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_72540 9c9f36cfb7614438312f0ff370a63fb5 428 SUPERFAMILY SSF51055 26 84 7.85E-14 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AMIS_72540 9c9f36cfb7614438312f0ff370a63fb5 428 Pfam PF00704 Glycosyl hydrolases family 18 137 409 2.0E-29 T 14-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 AMIS_72540 9c9f36cfb7614438312f0ff370a63fb5 428 SMART SM00636 134 409 1.1E-6 T 14-10-2018 IPR011583 Chitinase II GO:0008061 AMIS_30 d2001d4ddef46d6ed0942daca81c994a 290 Gene3D G3DSA:3.40.50.720 1 158 1.2E-45 T 14-10-2018 AMIS_30 d2001d4ddef46d6ed0942daca81c994a 290 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 160 270 7.1E-20 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AMIS_30 d2001d4ddef46d6ed0942daca81c994a 290 Gene3D G3DSA:1.10.1040.10 159 290 3.5E-45 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AMIS_30 d2001d4ddef46d6ed0942daca81c994a 290 SUPERFAMILY SSF51735 1 143 5.07E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_30 d2001d4ddef46d6ed0942daca81c994a 290 SUPERFAMILY SSF48179 158 289 5.03E-37 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMIS_30 d2001d4ddef46d6ed0942daca81c994a 290 TIGRFAM TIGR00872 gnd_rel: 6-phosphogluconate dehydrogenase (decarboxylating) 1 289 1.1E-104 T 14-10-2018 IPR004849 6-phosphogluconate dehydrogenase, YqeC-type GO:0055114 AMIS_30 d2001d4ddef46d6ed0942daca81c994a 290 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 143 1.4E-38 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 AMIS_30 d2001d4ddef46d6ed0942daca81c994a 290 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 1 15 1.9E-34 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AMIS_30 d2001d4ddef46d6ed0942daca81c994a 290 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 50 79 1.9E-34 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AMIS_30 d2001d4ddef46d6ed0942daca81c994a 290 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 224 251 1.9E-34 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AMIS_30 d2001d4ddef46d6ed0942daca81c994a 290 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 149 177 1.9E-34 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AMIS_30 d2001d4ddef46d6ed0942daca81c994a 290 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 103 128 1.9E-34 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AMIS_60840 25e5cdc670b45bff7b266265d5b0d026 371 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 6.4E-44 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AMIS_60840 25e5cdc670b45bff7b266265d5b0d026 371 SMART SM01002 149 297 1.7E-80 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AMIS_60840 25e5cdc670b45bff7b266265d5b0d026 371 Gene3D G3DSA:3.40.50.720 130 305 7.3E-135 T 14-10-2018 AMIS_60840 25e5cdc670b45bff7b266265d5b0d026 371 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 2 362 8.2E-168 T 14-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 AMIS_60840 25e5cdc670b45bff7b266265d5b0d026 371 PIRSF PIRSF000183 1 371 2.9E-162 T 14-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 AMIS_60840 25e5cdc670b45bff7b266265d5b0d026 371 SUPERFAMILY SSF51735 137 303 8.41E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_60840 25e5cdc670b45bff7b266265d5b0d026 371 SMART SM01003 4 137 7.2E-75 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AMIS_60840 25e5cdc670b45bff7b266265d5b0d026 371 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 352 7.9E-79 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AMIS_60840 25e5cdc670b45bff7b266265d5b0d026 371 SUPERFAMILY SSF52283 2 360 6.04E-63 T 14-10-2018 AMIS_60840 25e5cdc670b45bff7b266265d5b0d026 371 Gene3D G3DSA:3.40.50.720 3 351 7.3E-135 T 14-10-2018 AMIS_43930 c79cdc6acfb3b862c6b1601905c065d6 263 Gene3D G3DSA:2.40.50.90 52 178 3.4E-6 T 14-10-2018 IPR035437 SNase-like, OB-fold superfamily AMIS_43930 c79cdc6acfb3b862c6b1601905c065d6 263 SUPERFAMILY SSF50199 67 175 6.28E-7 T 14-10-2018 AMIS_43930 c79cdc6acfb3b862c6b1601905c065d6 263 Pfam PF00565 Staphylococcal nuclease homologue 1 173 1.8E-4 T 14-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 AMIS_57570 33f560adc65c006b434f7e3e9d635734 338 Pfam PF01341 Glycosyl hydrolases family 6 61 324 5.5E-80 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 AMIS_57570 33f560adc65c006b434f7e3e9d635734 338 SUPERFAMILY SSF51989 41 338 2.88E-83 T 14-10-2018 IPR036434 1, 4-beta cellobiohydrolase superfamily GO:0004553|GO:0030245 AMIS_57570 33f560adc65c006b434f7e3e9d635734 338 ProSitePatterns PS00655 Glycosyl hydrolases family 6 signature 1. 114 130 - T 14-10-2018 IPR001524 Glycoside hydrolase, family 6, conserved site GO:0004553|GO:0005975 AMIS_57570 33f560adc65c006b434f7e3e9d635734 338 PIRSF PIRSF001100 11 338 6.7E-90 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 AMIS_57570 33f560adc65c006b434f7e3e9d635734 338 Gene3D G3DSA:3.20.20.40 46 338 2.0E-98 T 14-10-2018 IPR036434 1, 4-beta cellobiohydrolase superfamily GO:0004553|GO:0030245 AMIS_57570 33f560adc65c006b434f7e3e9d635734 338 PRINTS PR00733 Glycosyl hydrolase family 6 signature 194 207 5.7E-39 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 AMIS_57570 33f560adc65c006b434f7e3e9d635734 338 PRINTS PR00733 Glycosyl hydrolase family 6 signature 301 315 5.7E-39 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 AMIS_57570 33f560adc65c006b434f7e3e9d635734 338 PRINTS PR00733 Glycosyl hydrolase family 6 signature 255 268 5.7E-39 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 AMIS_57570 33f560adc65c006b434f7e3e9d635734 338 PRINTS PR00733 Glycosyl hydrolase family 6 signature 137 152 5.7E-39 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 AMIS_57570 33f560adc65c006b434f7e3e9d635734 338 PRINTS PR00733 Glycosyl hydrolase family 6 signature 225 235 5.7E-39 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 AMIS_57570 33f560adc65c006b434f7e3e9d635734 338 PRINTS PR00733 Glycosyl hydrolase family 6 signature 109 122 5.7E-39 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 AMIS_57570 33f560adc65c006b434f7e3e9d635734 338 PRINTS PR00733 Glycosyl hydrolase family 6 signature 67 86 5.7E-39 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 AMIS_57570 33f560adc65c006b434f7e3e9d635734 338 PRINTS PR00733 Glycosyl hydrolase family 6 signature 277 297 5.7E-39 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 AMIS_30990 c3c6290a1f6c970ce6e65d802312de33 1065 Gene3D G3DSA:3.40.50.12740 941 1064 1.4E-42 T 14-10-2018 AMIS_30990 c3c6290a1f6c970ce6e65d802312de33 1065 Gene3D G3DSA:3.30.450.20 414 531 4.5E-19 T 14-10-2018 AMIS_30990 c3c6290a1f6c970ce6e65d802312de33 1065 SMART SM00387 670 783 5.9E-41 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_30990 c3c6290a1f6c970ce6e65d802312de33 1065 SUPERFAMILY SSF55785 434 540 3.54E-19 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_30990 c3c6290a1f6c970ce6e65d802312de33 1065 Gene3D G3DSA:1.10.287.130 532 621 8.4E-28 T 14-10-2018 AMIS_30990 c3c6290a1f6c970ce6e65d802312de33 1065 SMART SM00086 375 416 11.0 T 14-10-2018 IPR001610 PAC motif AMIS_30990 c3c6290a1f6c970ce6e65d802312de33 1065 SMART SM00086 500 538 3.7 T 14-10-2018 IPR001610 PAC motif AMIS_30990 c3c6290a1f6c970ce6e65d802312de33 1065 Pfam PF13426 PAS domain 320 414 1.2E-8 T 14-10-2018 IPR000014 PAS domain AMIS_30990 c3c6290a1f6c970ce6e65d802312de33 1065 Gene3D G3DSA:3.30.565.10 622 788 3.4E-51 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_30990 c3c6290a1f6c970ce6e65d802312de33 1065 Gene3D G3DSA:3.30.450.20 296 413 2.6E-17 T 14-10-2018 AMIS_30990 c3c6290a1f6c970ce6e65d802312de33 1065 PRINTS PR00344 Bacterial sensor protein C-terminal signature 726 736 1.4E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_30990 c3c6290a1f6c970ce6e65d802312de33 1065 PRINTS PR00344 Bacterial sensor protein C-terminal signature 767 780 1.4E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_30990 c3c6290a1f6c970ce6e65d802312de33 1065 PRINTS PR00344 Bacterial sensor protein C-terminal signature 708 722 1.4E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_30990 c3c6290a1f6c970ce6e65d802312de33 1065 PRINTS PR00344 Bacterial sensor protein C-terminal signature 743 761 1.4E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_30990 c3c6290a1f6c970ce6e65d802312de33 1065 Pfam PF08447 PAS fold 452 529 1.9E-12 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 AMIS_30990 c3c6290a1f6c970ce6e65d802312de33 1065 SUPERFAMILY SSF52172 941 1060 1.85E-38 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_30990 c3c6290a1f6c970ce6e65d802312de33 1065 SUPERFAMILY SSF52172 802 921 3.7E-13 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_30990 c3c6290a1f6c970ce6e65d802312de33 1065 SMART SM00091 428 494 0.0042 T 14-10-2018 IPR000014 PAS domain AMIS_30990 c3c6290a1f6c970ce6e65d802312de33 1065 SMART SM00091 309 375 2.5E-4 T 14-10-2018 IPR000014 PAS domain AMIS_30990 c3c6290a1f6c970ce6e65d802312de33 1065 SUPERFAMILY SSF55785 299 414 3.14E-17 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_30990 c3c6290a1f6c970ce6e65d802312de33 1065 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 670 782 2.2E-33 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_30990 c3c6290a1f6c970ce6e65d802312de33 1065 Pfam PF00072 Response regulator receiver domain 944 1056 1.1E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_30990 c3c6290a1f6c970ce6e65d802312de33 1065 Pfam PF00072 Response regulator receiver domain 804 915 5.6E-7 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_30990 c3c6290a1f6c970ce6e65d802312de33 1065 SMART SM00388 558 623 2.0E-24 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_30990 c3c6290a1f6c970ce6e65d802312de33 1065 SMART SM00448 801 917 0.0028 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_30990 c3c6290a1f6c970ce6e65d802312de33 1065 SMART SM00448 942 1056 8.1E-38 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_30990 c3c6290a1f6c970ce6e65d802312de33 1065 Pfam PF00512 His Kinase A (phospho-acceptor) domain 559 623 3.4E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_30990 c3c6290a1f6c970ce6e65d802312de33 1065 SUPERFAMILY SSF55874 612 787 5.89E-49 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_30990 c3c6290a1f6c970ce6e65d802312de33 1065 SUPERFAMILY SSF47384 543 624 8.83E-21 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_30990 c3c6290a1f6c970ce6e65d802312de33 1065 Gene3D G3DSA:3.40.50.2300 799 920 6.9E-11 T 14-10-2018 AMIS_30990 c3c6290a1f6c970ce6e65d802312de33 1065 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 429 545 3.1E-14 T 14-10-2018 IPR000014 PAS domain AMIS_30990 c3c6290a1f6c970ce6e65d802312de33 1065 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 306 422 9.3E-12 T 14-10-2018 IPR000014 PAS domain AMIS_80710 e538a27fdc425fb4c1f5fff0d8bbf273 1047 Gene3D G3DSA:3.40.50.300 912 1026 8.3E-29 T 14-10-2018 AMIS_80710 e538a27fdc425fb4c1f5fff0d8bbf273 1047 SUPERFAMILY SSF52540 492 1026 3.12E-121 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_80710 e538a27fdc425fb4c1f5fff0d8bbf273 1047 Pfam PF13245 AAA domain 500 699 5.2E-40 T 14-10-2018 AMIS_80710 e538a27fdc425fb4c1f5fff0d8bbf273 1047 Gene3D G3DSA:3.40.50.300 496 716 1.8E-60 T 14-10-2018 AMIS_80710 e538a27fdc425fb4c1f5fff0d8bbf273 1047 Gene3D G3DSA:3.40.50.300 722 845 9.6E-14 T 14-10-2018 AMIS_80710 e538a27fdc425fb4c1f5fff0d8bbf273 1047 Gene3D G3DSA:3.20.20.140 4 246 1.1E-12 T 14-10-2018 AMIS_80710 e538a27fdc425fb4c1f5fff0d8bbf273 1047 Pfam PF13361 UvrD-like helicase C-terminal domain 915 1003 3.2E-23 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AMIS_80710 e538a27fdc425fb4c1f5fff0d8bbf273 1047 SUPERFAMILY SSF89550 11 255 1.51E-16 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AMIS_31010 7f9109a0c0cd616a76063e7e42e30c86 653 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 394 511 7.1E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_31010 7f9109a0c0cd616a76063e7e42e30c86 653 Gene3D G3DSA:3.30.565.10 355 516 7.3E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_31010 7f9109a0c0cd616a76063e7e42e30c86 653 SUPERFAMILY SSF47384 267 346 8.63E-7 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_31010 7f9109a0c0cd616a76063e7e42e30c86 653 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 135 254 1.9E-16 T 14-10-2018 IPR000014 PAS domain AMIS_31010 7f9109a0c0cd616a76063e7e42e30c86 653 SUPERFAMILY SSF52172 2 109 3.56E-25 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_31010 7f9109a0c0cd616a76063e7e42e30c86 653 SUPERFAMILY SSF55874 348 510 6.94E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_31010 7f9109a0c0cd616a76063e7e42e30c86 653 Pfam PF13426 PAS domain 148 247 8.5E-7 T 14-10-2018 IPR000014 PAS domain AMIS_31010 7f9109a0c0cd616a76063e7e42e30c86 653 Gene3D G3DSA:3.40.50.2300 1 106 1.6E-23 T 14-10-2018 AMIS_31010 7f9109a0c0cd616a76063e7e42e30c86 653 Gene3D G3DSA:1.10.287.130 269 350 1.9E-12 T 14-10-2018 AMIS_31010 7f9109a0c0cd616a76063e7e42e30c86 653 SUPERFAMILY SSF55785 129 246 1.08E-17 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_31010 7f9109a0c0cd616a76063e7e42e30c86 653 PRINTS PR00344 Bacterial sensor protein C-terminal signature 472 490 5.2E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_31010 7f9109a0c0cd616a76063e7e42e30c86 653 PRINTS PR00344 Bacterial sensor protein C-terminal signature 496 509 5.2E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_31010 7f9109a0c0cd616a76063e7e42e30c86 653 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 455 5.2E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_31010 7f9109a0c0cd616a76063e7e42e30c86 653 PRINTS PR00344 Bacterial sensor protein C-terminal signature 459 469 5.2E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_31010 7f9109a0c0cd616a76063e7e42e30c86 653 Gene3D G3DSA:3.40.50.2300 522 652 4.8E-30 T 14-10-2018 AMIS_31010 7f9109a0c0cd616a76063e7e42e30c86 653 SMART SM00448 530 643 2.5E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_31010 7f9109a0c0cd616a76063e7e42e30c86 653 SMART SM00448 1 98 1.1E-8 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_31010 7f9109a0c0cd616a76063e7e42e30c86 653 Gene3D G3DSA:3.30.450.20 128 254 1.8E-19 T 14-10-2018 AMIS_31010 7f9109a0c0cd616a76063e7e42e30c86 653 SUPERFAMILY SSF52172 529 646 1.32E-32 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_31010 7f9109a0c0cd616a76063e7e42e30c86 653 Pfam PF00072 Response regulator receiver domain 532 643 1.1E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_31010 7f9109a0c0cd616a76063e7e42e30c86 653 Pfam PF00072 Response regulator receiver domain 5 98 2.1E-16 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_31010 7f9109a0c0cd616a76063e7e42e30c86 653 SMART SM00387 393 512 2.1E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_5830 bd1ab027ddc93ab507bb78ba85dab062 842 Gene3D G3DSA:3.30.450.40 233 399 1.3E-18 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_5830 bd1ab027ddc93ab507bb78ba85dab062 842 SMART SM00052 571 816 1.0E-91 T 14-10-2018 IPR001633 EAL domain AMIS_5830 bd1ab027ddc93ab507bb78ba85dab062 842 SMART SM00065 254 400 1.9E-12 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_5830 bd1ab027ddc93ab507bb78ba85dab062 842 Pfam PF00990 Diguanylate cyclase, GGDEF domain 403 553 7.4E-32 T 14-10-2018 IPR000160 GGDEF domain AMIS_5830 bd1ab027ddc93ab507bb78ba85dab062 842 Pfam PF01590 GAF domain 262 389 1.1E-9 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_5830 bd1ab027ddc93ab507bb78ba85dab062 842 SUPERFAMILY SSF55781 236 401 6.76E-17 T 14-10-2018 AMIS_5830 bd1ab027ddc93ab507bb78ba85dab062 842 Gene3D G3DSA:3.20.20.450 572 834 2.1E-90 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_5830 bd1ab027ddc93ab507bb78ba85dab062 842 SMART SM00267 392 561 4.2E-36 T 14-10-2018 IPR000160 GGDEF domain AMIS_5830 bd1ab027ddc93ab507bb78ba85dab062 842 Pfam PF00563 EAL domain 577 811 1.9E-71 T 14-10-2018 IPR001633 EAL domain AMIS_5830 bd1ab027ddc93ab507bb78ba85dab062 842 SUPERFAMILY SSF55073 408 554 2.75E-34 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_5830 bd1ab027ddc93ab507bb78ba85dab062 842 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 400 553 4.9E-28 T 14-10-2018 IPR000160 GGDEF domain AMIS_5830 bd1ab027ddc93ab507bb78ba85dab062 842 SUPERFAMILY SSF141868 578 823 6.02E-81 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_5830 bd1ab027ddc93ab507bb78ba85dab062 842 Gene3D G3DSA:3.30.70.270 400 556 9.4E-42 T 14-10-2018 AMIS_7480 63756e05a0613449d6204aaf9fa6f419 649 SUPERFAMILY SSF81296 550 648 2.8E-21 T 14-10-2018 IPR014756 Immunoglobulin E-set AMIS_7480 63756e05a0613449d6204aaf9fa6f419 649 Gene3D G3DSA:2.130.10.80 178 553 8.4E-53 T 14-10-2018 IPR037293 Galactose oxidase, central domain superfamily AMIS_7480 63756e05a0613449d6204aaf9fa6f419 649 Pfam PF09118 Domain of unknown function (DUF1929) 554 648 3.6E-22 T 14-10-2018 IPR015202 Galactose oxidase-like, Early set domain AMIS_7480 63756e05a0613449d6204aaf9fa6f419 649 Gene3D G3DSA:2.130.10.80 54 166 4.2E-15 T 14-10-2018 IPR037293 Galactose oxidase, central domain superfamily AMIS_7480 63756e05a0613449d6204aaf9fa6f419 649 SUPERFAMILY SSF50965 56 141 3.14E-7 T 14-10-2018 IPR011043 Galactose oxidase/kelch, beta-propeller AMIS_7480 63756e05a0613449d6204aaf9fa6f419 649 Gene3D G3DSA:2.60.40.10 554 649 9.4E-27 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_7480 63756e05a0613449d6204aaf9fa6f419 649 SUPERFAMILY SSF50965 263 550 1.27E-25 T 14-10-2018 IPR011043 Galactose oxidase/kelch, beta-propeller AMIS_81030 591a78a9d4c6e09d447f32e55db21e48 169 Pfam PF04542 Sigma-70 region 2 15 76 1.6E-7 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_81030 591a78a9d4c6e09d447f32e55db21e48 169 SUPERFAMILY SSF88946 6 93 4.71E-11 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_81030 591a78a9d4c6e09d447f32e55db21e48 169 SUPERFAMILY SSF88659 98 159 1.57E-15 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_81030 591a78a9d4c6e09d447f32e55db21e48 169 Gene3D G3DSA:1.10.10.10 78 162 1.9E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_81030 591a78a9d4c6e09d447f32e55db21e48 169 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 9 157 1.6E-21 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_81030 591a78a9d4c6e09d447f32e55db21e48 169 TIGRFAM TIGR02983 SigE-fam_strep: RNA polymerase sigma-70 factor, sigma-E family 6 160 6.0E-51 T 14-10-2018 IPR014325 RNA polymerase sigma-E factor, actinobacteria GO:0016987 AMIS_81030 591a78a9d4c6e09d447f32e55db21e48 169 Pfam PF08281 Sigma-70, region 4 102 155 4.9E-17 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_81030 591a78a9d4c6e09d447f32e55db21e48 169 Gene3D G3DSA:1.10.1740.10 2 77 1.3E-9 T 14-10-2018 AMIS_72970 d074f4e40cf6ae758dc3c347b7ccb78e 515 Pfam PF08448 PAS fold 187 295 1.5E-5 T 14-10-2018 IPR013656 PAS fold-4 AMIS_72970 d074f4e40cf6ae758dc3c347b7ccb78e 515 SMART SM00387 403 514 2.0E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_72970 d074f4e40cf6ae758dc3c347b7ccb78e 515 Gene3D G3DSA:3.30.450.280 1 145 7.7E-37 T 14-10-2018 IPR038424 Signal transduction histidine kinase, N-terminal domain superfamily AMIS_72970 d074f4e40cf6ae758dc3c347b7ccb78e 515 SUPERFAMILY SSF55874 374 512 1.57E-17 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_72970 d074f4e40cf6ae758dc3c347b7ccb78e 515 Gene3D G3DSA:3.30.565.10 365 515 1.5E-20 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_72970 d074f4e40cf6ae758dc3c347b7ccb78e 515 Pfam PF07568 Histidine kinase 309 379 2.5E-23 T 14-10-2018 IPR011495 Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain AMIS_72970 d074f4e40cf6ae758dc3c347b7ccb78e 515 Pfam PF12282 Signal transduction histidine kinase 4 160 1.7E-53 T 14-10-2018 IPR022066 Signal transduction histidine kinase, N-terminal AMIS_72970 d074f4e40cf6ae758dc3c347b7ccb78e 515 Gene3D G3DSA:3.30.450.20 146 295 1.8E-42 T 14-10-2018 AMIS_72970 d074f4e40cf6ae758dc3c347b7ccb78e 515 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 407 513 4.9E-9 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_5920 bce385cd90eda00c303acbf3d823fcb6 181 Pfam PF00466 Ribosomal protein L10 7 102 9.6E-25 T 14-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 AMIS_5920 bce385cd90eda00c303acbf3d823fcb6 181 Gene3D G3DSA:3.30.70.1730 2 158 3.9E-37 T 14-10-2018 AMIS_5920 bce385cd90eda00c303acbf3d823fcb6 181 ProSitePatterns PS01109 Ribosomal protein L10 signature. 10 44 - T 14-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_5920 bce385cd90eda00c303acbf3d823fcb6 181 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 5 162 24.192 T 14-10-2018 IPR022973 Ribosomal protein L10 AMIS_5920 bce385cd90eda00c303acbf3d823fcb6 181 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 70 174 0.002 T 14-10-2018 AMIS_5920 bce385cd90eda00c303acbf3d823fcb6 181 SUPERFAMILY SSF160369 6 172 2.22E-48 T 14-10-2018 AMIS_38840 4dae121a24989db0f3d831f9f6f17656 153 Gene3D G3DSA:1.10.10.10 1 55 8.6E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_38840 4dae121a24989db0f3d831f9f6f17656 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 18 29 4.8E-19 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMIS_38840 4dae121a24989db0f3d831f9f6f17656 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 29 48 4.8E-19 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMIS_38840 4dae121a24989db0f3d831f9f6f17656 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 2 18 4.8E-19 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMIS_38840 4dae121a24989db0f3d831f9f6f17656 153 SUPERFAMILY SSF54909 62 150 3.75E-19 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel AMIS_38840 4dae121a24989db0f3d831f9f6f17656 153 Pfam PF13412 Winged helix-turn-helix DNA-binding 2 48 2.2E-21 T 14-10-2018 AMIS_38840 4dae121a24989db0f3d831f9f6f17656 153 ProSitePatterns PS00519 AsnC-type HTH domain signature. 20 46 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AMIS_38840 4dae121a24989db0f3d831f9f6f17656 153 SMART SM00344 2 111 7.5E-47 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AMIS_38840 4dae121a24989db0f3d831f9f6f17656 153 Gene3D G3DSA:3.30.70.920 56 139 4.2E-24 T 14-10-2018 AMIS_38840 4dae121a24989db0f3d831f9f6f17656 153 SUPERFAMILY SSF46785 1 61 3.43E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_38840 4dae121a24989db0f3d831f9f6f17656 153 Pfam PF01037 Lrp/AsnC ligand binding domain 68 140 7.8E-20 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMIS_1980 e6257c846e0eed3e340feecc0b9a6ad5 91 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 7 55 2.5E-11 T 14-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 AMIS_1980 e6257c846e0eed3e340feecc0b9a6ad5 91 Pfam PF12728 Helix-turn-helix domain 7 57 9.7E-12 T 14-10-2018 AMIS_1980 e6257c846e0eed3e340feecc0b9a6ad5 91 SUPERFAMILY SSF46955 6 54 3.02E-10 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily AMIS_1980 e6257c846e0eed3e340feecc0b9a6ad5 91 Gene3D G3DSA:1.10.1660.10 7 65 8.5E-11 T 14-10-2018 AMIS_50940 a23cff19aa39aac17b9487ba3b2e65cb 220 Pfam PF00925 GTP cyclohydrolase II 22 190 1.8E-60 T 14-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AMIS_50940 a23cff19aa39aac17b9487ba3b2e65cb 220 SUPERFAMILY SSF142695 13 191 1.44E-54 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AMIS_50940 a23cff19aa39aac17b9487ba3b2e65cb 220 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 13 216 35.655 T 14-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AMIS_50940 a23cff19aa39aac17b9487ba3b2e65cb 220 Gene3D G3DSA:3.40.50.10990 13 193 1.0E-61 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AMIS_9460 95032fe8001c3a0cd2ee361b8f8968e0 408 Gene3D G3DSA:3.40.50.2000 192 349 6.4E-30 T 14-10-2018 AMIS_9460 95032fe8001c3a0cd2ee361b8f8968e0 408 Pfam PF00534 Glycosyl transferases group 1 196 346 3.1E-24 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 AMIS_9460 95032fe8001c3a0cd2ee361b8f8968e0 408 Pfam PF13579 Glycosyl transferase 4-like domain 15 172 7.0E-14 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AMIS_9460 95032fe8001c3a0cd2ee361b8f8968e0 408 Gene3D G3DSA:3.40.50.2000 1 191 2.4E-14 T 14-10-2018 AMIS_9460 95032fe8001c3a0cd2ee361b8f8968e0 408 SUPERFAMILY SSF53756 7 361 5.1E-59 T 14-10-2018 AMIS_220 47bccb7afd20a10293e0d09ef9cbd557 577 Gene3D G3DSA:3.30.230.80 235 345 7.1E-12 T 14-10-2018 AMIS_220 47bccb7afd20a10293e0d09ef9cbd557 577 SUPERFAMILY SSF55874 4 186 2.49E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_220 47bccb7afd20a10293e0d09ef9cbd557 577 SMART SM00387 19 157 2.3E-4 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_220 47bccb7afd20a10293e0d09ef9cbd557 577 SUPERFAMILY SSF54211 212 409 6.98E-32 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMIS_220 47bccb7afd20a10293e0d09ef9cbd557 577 SUPERFAMILY SSF110942 500 553 1.1E-5 T 14-10-2018 IPR037196 HSP90, C-terminal domain AMIS_220 47bccb7afd20a10293e0d09ef9cbd557 577 PIRSF PIRSF002583 196 575 9.8E-36 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 AMIS_220 47bccb7afd20a10293e0d09ef9cbd557 577 PIRSF PIRSF002583 1 202 5.7E-43 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 AMIS_220 47bccb7afd20a10293e0d09ef9cbd557 577 Pfam PF00183 Hsp90 protein 247 301 9.2E-6 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 AMIS_220 47bccb7afd20a10293e0d09ef9cbd557 577 Gene3D G3DSA:3.30.565.10 2 191 1.9E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_220 47bccb7afd20a10293e0d09ef9cbd557 577 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 119 6.4E-8 T 14-10-2018 AMIS_60790 4542f157bbbff2354fbe03f7e397d7ec 171 Gene3D G3DSA:3.40.630.30 1 166 7.9E-41 T 14-10-2018 AMIS_60790 4542f157bbbff2354fbe03f7e397d7ec 171 SUPERFAMILY SSF55729 3 162 6.97E-37 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_60790 4542f157bbbff2354fbe03f7e397d7ec 171 Pfam PF13302 Acetyltransferase (GNAT) domain 8 153 6.6E-28 T 14-10-2018 IPR000182 GNAT domain AMIS_29940 610dbaba975885452b41a74322ff338b 255 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 181 198 0.004 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_29940 610dbaba975885452b41a74322ff338b 255 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 127 144 0.26 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_29940 610dbaba975885452b41a74322ff338b 255 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 145 162 0.3 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_29940 610dbaba975885452b41a74322ff338b 255 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 200 216 8.0E-4 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_29940 610dbaba975885452b41a74322ff338b 255 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 163 180 0.0035 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_29940 610dbaba975885452b41a74322ff338b 255 SUPERFAMILY SSF51120 107 222 1.15E-21 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_29940 610dbaba975885452b41a74322ff338b 255 PRINTS PR00313 NodO calcium binding signature 173 181 7.3E-10 T 14-10-2018 AMIS_29940 610dbaba975885452b41a74322ff338b 255 PRINTS PR00313 NodO calcium binding signature 161 172 7.3E-10 T 14-10-2018 AMIS_29940 610dbaba975885452b41a74322ff338b 255 PRINTS PR00313 NodO calcium binding signature 209 218 7.3E-10 T 14-10-2018 AMIS_29940 610dbaba975885452b41a74322ff338b 255 PRINTS PR00313 NodO calcium binding signature 191 199 7.3E-10 T 14-10-2018 AMIS_29940 610dbaba975885452b41a74322ff338b 255 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 178 196 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site AMIS_29940 610dbaba975885452b41a74322ff338b 255 Gene3D G3DSA:2.150.10.10 174 245 1.1E-11 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_29940 610dbaba975885452b41a74322ff338b 255 Gene3D G3DSA:2.150.10.10 29 173 1.1E-12 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_56730 45746b7d7aee78409d3af62b0ae87246 371 PIRSF PIRSF000390 7 370 2.0E-89 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AMIS_56730 45746b7d7aee78409d3af62b0ae87246 371 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 21 363 1.1E-96 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AMIS_56730 45746b7d7aee78409d3af62b0ae87246 371 Gene3D G3DSA:3.40.640.10 2 238 2.1E-72 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_56730 45746b7d7aee78409d3af62b0ae87246 371 SUPERFAMILY SSF53383 17 368 6.48E-90 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_56730 45746b7d7aee78409d3af62b0ae87246 371 Gene3D G3DSA:3.90.1150.10 239 369 3.8E-32 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMIS_33270 96934ca2d09ae88b49079429014e5613 258 Pfam PF14344 Domain of unknown function (DUF4397) 22 136 2.6E-22 T 14-10-2018 IPR025510 Domain of unknown function DUF4397 AMIS_49730 9e384282e4830d1d281444c7f6471858 151 SUPERFAMILY SSF55729 6 140 2.27E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_49730 9e384282e4830d1d281444c7f6471858 151 Pfam PF00583 Acetyltransferase (GNAT) family 39 133 3.3E-16 T 14-10-2018 IPR000182 GNAT domain AMIS_49730 9e384282e4830d1d281444c7f6471858 151 Gene3D G3DSA:3.40.630.30 4 148 7.2E-25 T 14-10-2018 AMIS_17340 518b339793f1b76601850cac3b489089 577 SUPERFAMILY SSF55785 54 175 7.33E-24 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_17340 518b339793f1b76601850cac3b489089 577 SMART SM00448 449 560 3.3E-13 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_17340 518b339793f1b76601850cac3b489089 577 SMART SM00387 306 429 5.1E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_17340 518b339793f1b76601850cac3b489089 577 Gene3D G3DSA:1.10.287.130 197 263 1.5E-17 T 14-10-2018 AMIS_17340 518b339793f1b76601850cac3b489089 577 Gene3D G3DSA:3.30.565.10 266 432 5.8E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_17340 518b339793f1b76601850cac3b489089 577 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 307 427 5.6E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_17340 518b339793f1b76601850cac3b489089 577 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 62 183 9.5E-25 T 14-10-2018 IPR000014 PAS domain AMIS_17340 518b339793f1b76601850cac3b489089 577 Gene3D G3DSA:3.30.450.20 54 196 1.7E-28 T 14-10-2018 AMIS_17340 518b339793f1b76601850cac3b489089 577 SUPERFAMILY SSF47384 189 263 1.53E-9 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_17340 518b339793f1b76601850cac3b489089 577 Pfam PF00989 PAS fold 64 174 3.1E-16 T 14-10-2018 IPR013767 PAS fold GO:0006355 AMIS_17340 518b339793f1b76601850cac3b489089 577 Pfam PF00072 Response regulator receiver domain 451 559 4.2E-16 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_17340 518b339793f1b76601850cac3b489089 577 SUPERFAMILY SSF52172 448 564 6.12E-26 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_17340 518b339793f1b76601850cac3b489089 577 SMART SM00091 63 128 8.5E-9 T 14-10-2018 IPR000014 PAS domain AMIS_17340 518b339793f1b76601850cac3b489089 577 SUPERFAMILY SSF55874 255 430 1.96E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_17340 518b339793f1b76601850cac3b489089 577 SMART SM00388 199 265 1.3E-6 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_17340 518b339793f1b76601850cac3b489089 577 Gene3D G3DSA:3.40.50.2300 447 571 2.9E-22 T 14-10-2018 AMIS_17340 518b339793f1b76601850cac3b489089 577 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 386 1.5E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_17340 518b339793f1b76601850cac3b489089 577 PRINTS PR00344 Bacterial sensor protein C-terminal signature 358 372 1.5E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_17340 518b339793f1b76601850cac3b489089 577 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 407 1.5E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_17340 518b339793f1b76601850cac3b489089 577 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 426 1.5E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_54830 98fca843a331d0824caf4a7ebd3f56fc 260 Gene3D G3DSA:3.20.20.150 1 260 1.2E-64 T 14-10-2018 AMIS_54830 98fca843a331d0824caf4a7ebd3f56fc 260 SUPERFAMILY SSF51658 4 258 4.82E-37 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily AMIS_54830 98fca843a331d0824caf4a7ebd3f56fc 260 Pfam PF01261 Xylose isomerase-like TIM barrel 19 204 5.0E-16 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AMIS_38550 bfac6776f50d4c0a3831de63c6be196b 343 SUPERFAMILY SSF54919 22 143 8.25E-16 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMIS_38550 bfac6776f50d4c0a3831de63c6be196b 343 Gene3D G3DSA:3.30.70.141 19 154 1.0E-11 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMIS_38550 bfac6776f50d4c0a3831de63c6be196b 343 Pfam PF00334 Nucleoside diphosphate kinase 22 143 1.1E-7 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMIS_38550 bfac6776f50d4c0a3831de63c6be196b 343 SMART SM00562 23 149 9.9E-4 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMIS_34970 a93b3b76deb9cda8b7220975313944f7 137 SUPERFAMILY SSF118196 5 131 1.96E-36 T 14-10-2018 IPR036413 YaeB-like superfamily AMIS_34970 a93b3b76deb9cda8b7220975313944f7 137 ProSitePatterns PS01318 TsaA-like domain signature. 83 94 - T 14-10-2018 IPR023368 Uncharacterised protein family UPF0066, conserved site AMIS_34970 a93b3b76deb9cda8b7220975313944f7 137 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 4 131 6.4E-31 T 14-10-2018 IPR023370 YaeB-like, N-terminal domain AMIS_34970 a93b3b76deb9cda8b7220975313944f7 137 Pfam PF01980 Uncharacterised protein family UPF0066 23 131 2.8E-27 T 14-10-2018 IPR023370 YaeB-like, N-terminal domain AMIS_34970 a93b3b76deb9cda8b7220975313944f7 137 Gene3D G3DSA:2.40.30.70 1 133 8.5E-37 T 14-10-2018 IPR036414 YaeB, N-terminal domain superfamily AMIS_29050 11eb489ba97d9c3d6b02976fd890412a 1503 SMART SM00304 194 246 9.5E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_29050 11eb489ba97d9c3d6b02976fd890412a 1503 SMART SM00304 10 62 0.0021 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_29050 11eb489ba97d9c3d6b02976fd890412a 1503 SMART SM00304 562 614 2.8E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_29050 11eb489ba97d9c3d6b02976fd890412a 1503 SMART SM00304 470 522 1.5E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_29050 11eb489ba97d9c3d6b02976fd890412a 1503 SMART SM00304 654 706 5.0E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_29050 11eb489ba97d9c3d6b02976fd890412a 1503 SMART SM00304 102 154 9.7E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_29050 11eb489ba97d9c3d6b02976fd890412a 1503 SMART SM00304 378 430 1.3E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_29050 11eb489ba97d9c3d6b02976fd890412a 1503 SMART SM00304 286 338 9.5E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_29050 11eb489ba97d9c3d6b02976fd890412a 1503 SMART SM00388 948 1016 9.3E-21 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_29050 11eb489ba97d9c3d6b02976fd890412a 1503 SUPERFAMILY SSF58104 122 252 7.06E-13 T 14-10-2018 AMIS_29050 11eb489ba97d9c3d6b02976fd890412a 1503 Pfam PF00512 His Kinase A (phospho-acceptor) domain 949 1016 5.3E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_29050 11eb489ba97d9c3d6b02976fd890412a 1503 Gene3D G3DSA:3.40.50.12740 1371 1502 3.8E-44 T 14-10-2018 AMIS_29050 11eb489ba97d9c3d6b02976fd890412a 1503 SMART SM00065 730 877 8.9E-5 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_29050 11eb489ba97d9c3d6b02976fd890412a 1503 Gene3D G3DSA:1.10.287.130 911 1014 1.9E-26 T 14-10-2018 AMIS_29050 11eb489ba97d9c3d6b02976fd890412a 1503 Gene3D G3DSA:2.60.120.260 377 465 2.1E-8 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_29050 11eb489ba97d9c3d6b02976fd890412a 1503 Gene3D G3DSA:2.60.120.260 193 282 7.6E-10 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_29050 11eb489ba97d9c3d6b02976fd890412a 1503 Gene3D G3DSA:2.60.120.260 466 558 7.4E-7 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_29050 11eb489ba97d9c3d6b02976fd890412a 1503 Gene3D G3DSA:2.60.120.260 283 376 3.9E-10 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_29050 11eb489ba97d9c3d6b02976fd890412a 1503 Gene3D G3DSA:2.60.120.260 96 192 1.1E-8 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_29050 11eb489ba97d9c3d6b02976fd890412a 1503 Gene3D G3DSA:2.60.120.260 559 652 1.4E-8 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_29050 11eb489ba97d9c3d6b02976fd890412a 1503 SMART SM00387 1063 1186 2.1E-37 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_29050 11eb489ba97d9c3d6b02976fd890412a 1503 SUPERFAMILY SSF58104 306 578 1.44E-15 T 14-10-2018 AMIS_29050 11eb489ba97d9c3d6b02976fd890412a 1503 Gene3D G3DSA:3.30.565.10 1015 1188 1.3E-48 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_29050 11eb489ba97d9c3d6b02976fd890412a 1503 SUPERFAMILY SSF52172 1371 1492 1.15E-38 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_29050 11eb489ba97d9c3d6b02976fd890412a 1503 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1063 1184 3.9E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_29050 11eb489ba97d9c3d6b02976fd890412a 1503 Gene3D G3DSA:1.10.8.500 656 718 2.2E-8 T 14-10-2018 AMIS_29050 11eb489ba97d9c3d6b02976fd890412a 1503 Gene3D G3DSA:3.30.450.40 719 872 2.8E-15 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_29050 11eb489ba97d9c3d6b02976fd890412a 1503 Gene3D G3DSA:3.40.50.2300 1206 1321 3.1E-9 T 14-10-2018 AMIS_29050 11eb489ba97d9c3d6b02976fd890412a 1503 Pfam PF00672 HAMP domain 381 426 5.7E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_29050 11eb489ba97d9c3d6b02976fd890412a 1503 Pfam PF00672 HAMP domain 568 609 2.9E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_29050 11eb489ba97d9c3d6b02976fd890412a 1503 Pfam PF00672 HAMP domain 473 518 6.2E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_29050 11eb489ba97d9c3d6b02976fd890412a 1503 SUPERFAMILY SSF55874 1005 1187 2.1E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_29050 11eb489ba97d9c3d6b02976fd890412a 1503 SUPERFAMILY SSF47384 933 1018 7.65E-21 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_29050 11eb489ba97d9c3d6b02976fd890412a 1503 SUPERFAMILY SSF58104 582 706 4.97E-11 T 14-10-2018 AMIS_29050 11eb489ba97d9c3d6b02976fd890412a 1503 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1146 1164 2.2E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_29050 11eb489ba97d9c3d6b02976fd890412a 1503 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1111 1125 2.2E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_29050 11eb489ba97d9c3d6b02976fd890412a 1503 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1170 1183 2.2E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_29050 11eb489ba97d9c3d6b02976fd890412a 1503 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1129 1139 2.2E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_29050 11eb489ba97d9c3d6b02976fd890412a 1503 Pfam PF00072 Response regulator receiver domain 1233 1302 6.8E-6 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_29050 11eb489ba97d9c3d6b02976fd890412a 1503 Pfam PF00072 Response regulator receiver domain 1374 1486 1.9E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_29050 11eb489ba97d9c3d6b02976fd890412a 1503 SMART SM00448 1216 1337 0.25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_29050 11eb489ba97d9c3d6b02976fd890412a 1503 SMART SM00448 1372 1486 6.9E-38 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_29050 11eb489ba97d9c3d6b02976fd890412a 1503 Pfam PF13185 GAF domain 729 861 1.8E-14 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_29050 11eb489ba97d9c3d6b02976fd890412a 1503 SUPERFAMILY SSF55781 694 861 8.83E-25 T 14-10-2018 AMIS_29050 11eb489ba97d9c3d6b02976fd890412a 1503 SUPERFAMILY SSF52172 1231 1302 8.97E-9 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_48710 08ac7836af28669453935b28f05ec91c 248 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_48710 08ac7836af28669453935b28f05ec91c 248 SUPERFAMILY SSF52540 5 229 4.6E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_48710 08ac7836af28669453935b28f05ec91c 248 Gene3D G3DSA:3.40.50.300 3 235 3.8E-65 T 14-10-2018 AMIS_48710 08ac7836af28669453935b28f05ec91c 248 Pfam PF00005 ABC transporter 25 173 3.8E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_48710 08ac7836af28669453935b28f05ec91c 248 SMART SM00382 34 221 3.6E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_4520 2f72f52eeb7f4ced15f8a03517fcf205 224 Pfam PF13432 Tetratricopeptide repeat 29 92 2.1E-6 T 14-10-2018 AMIS_4520 2f72f52eeb7f4ced15f8a03517fcf205 224 Pfam PF13181 Tetratricopeptide repeat 161 193 0.054 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_4520 2f72f52eeb7f4ced15f8a03517fcf205 224 SUPERFAMILY SSF48452 25 197 1.21E-25 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_4520 2f72f52eeb7f4ced15f8a03517fcf205 224 SMART SM00028 58 91 2.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_4520 2f72f52eeb7f4ced15f8a03517fcf205 224 SMART SM00028 92 125 190.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_4520 2f72f52eeb7f4ced15f8a03517fcf205 224 SMART SM00028 161 194 20.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_4520 2f72f52eeb7f4ced15f8a03517fcf205 224 Gene3D G3DSA:1.25.40.10 140 209 1.0E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_4520 2f72f52eeb7f4ced15f8a03517fcf205 224 Gene3D G3DSA:1.25.40.10 5 139 1.2E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_54480 8e011827bd5576b7f645415a6f3a3be5 308 SMART SM00014 108 211 0.0015 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMIS_54480 8e011827bd5576b7f645415a6f3a3be5 308 Pfam PF01569 PAP2 superfamily 131 217 1.5E-12 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMIS_54480 8e011827bd5576b7f645415a6f3a3be5 308 Gene3D G3DSA:1.20.144.10 138 226 9.4E-13 T 14-10-2018 AMIS_54480 8e011827bd5576b7f645415a6f3a3be5 308 SUPERFAMILY SSF48317 28 218 2.35E-17 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily AMIS_16200 6a1d7ac6257101cbc53e5c9729e570ad 704 SUPERFAMILY SSF52922 559 694 2.14E-38 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AMIS_16200 6a1d7ac6257101cbc53e5c9729e570ad 704 SMART SM00861 371 551 1.3E-67 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AMIS_16200 6a1d7ac6257101cbc53e5c9729e570ad 704 Pfam PF02779 Transketolase, pyrimidine binding domain 370 550 2.7E-44 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AMIS_16200 6a1d7ac6257101cbc53e5c9729e570ad 704 ProSitePatterns PS00801 Transketolase signature 1. 22 42 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AMIS_16200 6a1d7ac6257101cbc53e5c9729e570ad 704 TIGRFAM TIGR00232 tktlase_bact: transketolase 16 689 6.4E-239 T 14-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 AMIS_16200 6a1d7ac6257101cbc53e5c9729e570ad 704 SUPERFAMILY SSF52518 8 336 2.36E-102 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold AMIS_16200 6a1d7ac6257101cbc53e5c9729e570ad 704 Gene3D G3DSA:3.40.50.970 349 560 1.2E-79 T 14-10-2018 AMIS_16200 6a1d7ac6257101cbc53e5c9729e570ad 704 SUPERFAMILY SSF52518 353 552 1.64E-66 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold AMIS_16200 6a1d7ac6257101cbc53e5c9729e570ad 704 Gene3D G3DSA:3.40.50.920 566 692 2.0E-39 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AMIS_16200 6a1d7ac6257101cbc53e5c9729e570ad 704 Gene3D G3DSA:3.40.50.970 2 348 3.2E-112 T 14-10-2018 AMIS_16200 6a1d7ac6257101cbc53e5c9729e570ad 704 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 14 354 2.6E-128 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AMIS_16200 6a1d7ac6257101cbc53e5c9729e570ad 704 Pfam PF02780 Transketolase, C-terminal domain 577 683 4.3E-9 T 14-10-2018 IPR033248 Transketolase, C-terminal domain AMIS_16200 6a1d7ac6257101cbc53e5c9729e570ad 704 ProSitePatterns PS00802 Transketolase signature 2. 493 509 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AMIS_68920 bcd82597dfc4947bc06afd1b2e443a34 172 Pfam PF03477 ATP cone domain 47 131 8.5E-15 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 AMIS_68920 bcd82597dfc4947bc06afd1b2e443a34 172 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 2 144 6.8E-47 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 AMIS_68920 bcd82597dfc4947bc06afd1b2e443a34 172 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 150 74.61 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 AMIS_48200 b3230a60e0956b52316c29679ad90d8b 549 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 213 320 4.0E-14 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMIS_48200 b3230a60e0956b52316c29679ad90d8b 549 SUPERFAMILY SSF53738 309 451 2.32E-31 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMIS_48200 b3230a60e0956b52316c29679ad90d8b 549 SUPERFAMILY SSF53738 26 238 2.17E-47 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMIS_48200 b3230a60e0956b52316c29679ad90d8b 549 Gene3D G3DSA:3.40.120.10 224 321 5.7E-45 T 14-10-2018 AMIS_48200 b3230a60e0956b52316c29679ad90d8b 549 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 143 152 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMIS_48200 b3230a60e0956b52316c29679ad90d8b 549 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 1 547 2.3E-278 T 14-10-2018 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6317|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-6981|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7900|MetaCyc: PWY-7902 AMIS_48200 b3230a60e0956b52316c29679ad90d8b 549 Gene3D G3DSA:3.40.120.10 12 221 1.1E-68 T 14-10-2018 AMIS_48200 b3230a60e0956b52316c29679ad90d8b 549 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 182 6.7E-35 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMIS_48200 b3230a60e0956b52316c29679ad90d8b 549 Gene3D G3DSA:3.40.120.10 322 446 2.3E-33 T 14-10-2018 AMIS_48200 b3230a60e0956b52316c29679ad90d8b 549 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 494 540 4.0E-9 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMIS_48200 b3230a60e0956b52316c29679ad90d8b 549 Gene3D G3DSA:3.30.310.50 447 549 1.4E-34 T 14-10-2018 AMIS_48200 b3230a60e0956b52316c29679ad90d8b 549 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 324 444 1.1E-26 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMIS_48200 b3230a60e0956b52316c29679ad90d8b 549 SUPERFAMILY SSF55957 437 548 3.4E-20 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMIS_48200 b3230a60e0956b52316c29679ad90d8b 549 SUPERFAMILY SSF53738 213 320 1.53E-7 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMIS_48890 f41a5d5d5d1c1c8e3363fd3ac2cbe83c 185 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 61 5.9E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_48890 f41a5d5d5d1c1c8e3363fd3ac2cbe83c 185 SUPERFAMILY SSF46689 3 83 8.21E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_48890 f41a5d5d5d1c1c8e3363fd3ac2cbe83c 185 Gene3D G3DSA:1.10.357.10 2 181 1.7E-49 T 14-10-2018 AMIS_39850 72fa215df50bea670973566f91f05d1e 469 Gene3D G3DSA:2.115.10.20 22 322 7.9E-89 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMIS_39850 72fa215df50bea670973566f91f05d1e 469 Pfam PF04616 Glycosyl hydrolases family 43 27 311 9.5E-43 T 14-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 AMIS_39850 72fa215df50bea670973566f91f05d1e 469 SUPERFAMILY SSF75005 18 311 9.95E-66 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMIS_39850 72fa215df50bea670973566f91f05d1e 469 Gene3D G3DSA:2.60.120.260 327 469 4.1E-31 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_50160 b97e22755a10b6f1397b8a4ec24f2c7d 545 Gene3D G3DSA:3.40.50.2000 204 352 4.1E-5 T 14-10-2018 AMIS_50160 b97e22755a10b6f1397b8a4ec24f2c7d 545 Gene3D G3DSA:3.40.50.2000 365 533 2.1E-35 T 14-10-2018 AMIS_50160 b97e22755a10b6f1397b8a4ec24f2c7d 545 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 7 145 1.9E-32 T 14-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 AMIS_50160 b97e22755a10b6f1397b8a4ec24f2c7d 545 Gene3D G3DSA:3.40.50.1000 3 171 9.3E-45 T 14-10-2018 IPR023214 HAD superfamily AMIS_50160 b97e22755a10b6f1397b8a4ec24f2c7d 545 Pfam PF13242 HAD-hyrolase-like 97 160 1.3E-11 T 14-10-2018 AMIS_50160 b97e22755a10b6f1397b8a4ec24f2c7d 545 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 275 503 9.1E-22 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 AMIS_50160 b97e22755a10b6f1397b8a4ec24f2c7d 545 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 7 141 3.6E-32 T 14-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 AMIS_50160 b97e22755a10b6f1397b8a4ec24f2c7d 545 SUPERFAMILY SSF53756 205 530 4.39E-60 T 14-10-2018 AMIS_50160 b97e22755a10b6f1397b8a4ec24f2c7d 545 SUPERFAMILY SSF56784 5 171 9.87E-44 T 14-10-2018 IPR036412 HAD-like superfamily AMIS_26400 dd09fa84e66fc83f595e4fef32329be9 401 Gene3D G3DSA:3.30.9.50 41 274 3.7E-68 T 14-10-2018 AMIS_26400 dd09fa84e66fc83f595e4fef32329be9 401 SUPERFAMILY SSF51905 5 357 2.68E-50 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_26400 dd09fa84e66fc83f595e4fef32329be9 401 Pfam PF01494 FAD binding domain 5 343 1.8E-18 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 AMIS_26400 dd09fa84e66fc83f595e4fef32329be9 401 Gene3D G3DSA:3.50.50.60 8 345 3.7E-68 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_26400 dd09fa84e66fc83f595e4fef32329be9 401 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 3.2E-13 T 14-10-2018 AMIS_26400 dd09fa84e66fc83f595e4fef32329be9 401 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 299 315 3.2E-13 T 14-10-2018 AMIS_26400 dd09fa84e66fc83f595e4fef32329be9 401 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 149 164 3.2E-13 T 14-10-2018 AMIS_26400 dd09fa84e66fc83f595e4fef32329be9 401 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 284 299 3.2E-13 T 14-10-2018 AMIS_57400 7f85be39a6c0e53dd901a83b9e547d0e 467 Gene3D G3DSA:1.10.4100.10 29 424 1.3E-102 T 14-10-2018 AMIS_57400 7f85be39a6c0e53dd901a83b9e547d0e 467 Gene3D G3DSA:3.30.1330.120 273 408 1.3E-102 T 14-10-2018 AMIS_57400 7f85be39a6c0e53dd901a83b9e547d0e 467 SUPERFAMILY SSF103378 4 450 3.53E-105 T 14-10-2018 IPR036148 MmgE/PrpD superfamily GO:0016829 AMIS_57400 7f85be39a6c0e53dd901a83b9e547d0e 467 Pfam PF03972 MmgE/PrpD family 17 446 1.0E-105 T 14-10-2018 IPR005656 MmgE/PrpD GO:0016829 AMIS_1490 6a32485e34a8561a3d2fa3b70d5dcaef 443 Gene3D G3DSA:1.10.579.10 283 440 2.4E-61 T 14-10-2018 AMIS_1490 6a32485e34a8561a3d2fa3b70d5dcaef 443 Gene3D G3DSA:3.40.50.620 5 193 1.2E-64 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMIS_1490 6a32485e34a8561a3d2fa3b70d5dcaef 443 Gene3D G3DSA:1.25.40.80 126 271 1.2E-64 T 14-10-2018 AMIS_1490 6a32485e34a8561a3d2fa3b70d5dcaef 443 Pfam PF00875 DNA photolyase 4 164 4.2E-45 T 14-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 AMIS_1490 6a32485e34a8561a3d2fa3b70d5dcaef 443 PRINTS PR00147 DNA photolyase signature 326 344 1.8E-24 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AMIS_1490 6a32485e34a8561a3d2fa3b70d5dcaef 443 PRINTS PR00147 DNA photolyase signature 365 379 1.8E-24 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AMIS_1490 6a32485e34a8561a3d2fa3b70d5dcaef 443 PRINTS PR00147 DNA photolyase signature 306 322 1.8E-24 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AMIS_1490 6a32485e34a8561a3d2fa3b70d5dcaef 443 PRINTS PR00147 DNA photolyase signature 138 154 1.8E-24 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AMIS_1490 6a32485e34a8561a3d2fa3b70d5dcaef 443 SUPERFAMILY SSF48173 184 435 9.16E-85 T 14-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 AMIS_1490 6a32485e34a8561a3d2fa3b70d5dcaef 443 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 306 318 - T 14-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal AMIS_1490 6a32485e34a8561a3d2fa3b70d5dcaef 443 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 326 345 - T 14-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal AMIS_1490 6a32485e34a8561a3d2fa3b70d5dcaef 443 SUPERFAMILY SSF52425 3 183 1.1E-44 T 14-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 AMIS_1490 6a32485e34a8561a3d2fa3b70d5dcaef 443 Pfam PF03441 FAD binding domain of DNA photolyase 258 424 5.8E-64 T 14-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 AMIS_50120 8a0c482074fd48d7ee2db6f55cbea251 471 SUPERFAMILY SSF53613 1 283 1.14E-39 T 14-10-2018 IPR029056 Ribokinase-like AMIS_50120 8a0c482074fd48d7ee2db6f55cbea251 471 SUPERFAMILY SSF52374 318 449 2.67E-22 T 14-10-2018 AMIS_50120 8a0c482074fd48d7ee2db6f55cbea251 471 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 317 382 1.0E-14 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AMIS_50120 8a0c482074fd48d7ee2db6f55cbea251 471 Gene3D G3DSA:3.40.1190.20 1 290 3.2E-72 T 14-10-2018 IPR029056 Ribokinase-like AMIS_50120 8a0c482074fd48d7ee2db6f55cbea251 471 Gene3D G3DSA:3.40.50.620 293 450 2.1E-35 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMIS_50120 8a0c482074fd48d7ee2db6f55cbea251 471 Pfam PF00294 pfkB family carbohydrate kinase 169 289 3.1E-19 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB AMIS_50120 8a0c482074fd48d7ee2db6f55cbea251 471 Pfam PF01467 Cytidylyltransferase-like 320 413 1.1E-14 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AMIS_27650 26c743cdd18b289aceeabfc5507b6f6b 926 SUPERFAMILY SSF49785 296 428 9.96E-16 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_27650 26c743cdd18b289aceeabfc5507b6f6b 926 Pfam PF01055 Glycosyl hydrolases family 31 488 922 1.2E-84 T 14-10-2018 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 AMIS_27650 26c743cdd18b289aceeabfc5507b6f6b 926 Gene3D G3DSA:3.20.20.80 494 868 3.4E-77 T 14-10-2018 AMIS_27650 26c743cdd18b289aceeabfc5507b6f6b 926 Pfam PF03422 Carbohydrate binding module (family 6) 304 428 2.7E-7 T 14-10-2018 IPR005084 Carbohydrate binding module family 6 GO:0030246 AMIS_27650 26c743cdd18b289aceeabfc5507b6f6b 926 SUPERFAMILY SSF51445 497 836 6.67E-42 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_27650 26c743cdd18b289aceeabfc5507b6f6b 926 Gene3D G3DSA:2.60.120.260 146 275 1.1E-29 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_27650 26c743cdd18b289aceeabfc5507b6f6b 926 SUPERFAMILY SSF49785 149 275 1.7E-21 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_27650 26c743cdd18b289aceeabfc5507b6f6b 926 Pfam PF16990 Carbohydrate binding module (family 35) 149 275 1.3E-10 T 14-10-2018 IPR005084 Carbohydrate binding module family 6 GO:0030246 AMIS_27650 26c743cdd18b289aceeabfc5507b6f6b 926 SMART SM00606 142 277 0.0043 T 14-10-2018 IPR006584 Cellulose binding, type IV GO:0030246 AMIS_27650 26c743cdd18b289aceeabfc5507b6f6b 926 SMART SM00606 304 429 0.043 T 14-10-2018 IPR006584 Cellulose binding, type IV GO:0030246 AMIS_27650 26c743cdd18b289aceeabfc5507b6f6b 926 Gene3D G3DSA:2.60.120.260 297 434 3.9E-30 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_27650 26c743cdd18b289aceeabfc5507b6f6b 926 Gene3D G3DSA:2.60.40.1180 869 920 7.5E-15 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta AMIS_27650 26c743cdd18b289aceeabfc5507b6f6b 926 SUPERFAMILY SSF51011 837 919 5.68E-19 T 14-10-2018 AMIS_38310 7f3eac9340e1c1eae22abf6ef5119df8 579 SUPERFAMILY SSF90123 15 332 4.97E-66 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMIS_38310 7f3eac9340e1c1eae22abf6ef5119df8 579 SUPERFAMILY SSF52540 336 578 6.81E-91 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_38310 7f3eac9340e1c1eae22abf6ef5119df8 579 SMART SM00382 371 559 1.6E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_38310 7f3eac9340e1c1eae22abf6ef5119df8 579 Gene3D G3DSA:3.40.50.300 335 579 1.8E-90 T 14-10-2018 AMIS_38310 7f3eac9340e1c1eae22abf6ef5119df8 579 ProSitePatterns PS00211 ABC transporters family signature. 483 497 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_38310 7f3eac9340e1c1eae22abf6ef5119df8 579 Pfam PF00005 ABC transporter 363 511 1.4E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_38310 7f3eac9340e1c1eae22abf6ef5119df8 579 Gene3D G3DSA:1.20.1560.10 1 332 4.4E-75 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMIS_38310 7f3eac9340e1c1eae22abf6ef5119df8 579 Pfam PF00664 ABC transporter transmembrane region 31 299 1.6E-39 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AMIS_12350 97a5563c106b7a86e274011d57da81e5 298 Pfam PF01261 Xylose isomerase-like TIM barrel 46 235 1.4E-9 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AMIS_12350 97a5563c106b7a86e274011d57da81e5 298 SUPERFAMILY SSF51658 44 257 2.84E-10 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily AMIS_12350 97a5563c106b7a86e274011d57da81e5 298 Gene3D G3DSA:3.20.20.150 14 290 3.0E-11 T 14-10-2018 AMIS_7790 a595b80e7a8b89ab4080215bf8341e77 452 Gene3D G3DSA:3.10.580.10 333 452 5.5E-18 T 14-10-2018 AMIS_7790 a595b80e7a8b89ab4080215bf8341e77 452 Pfam PF00571 CBS domain 336 389 2.8E-7 T 14-10-2018 IPR000644 CBS domain AMIS_7790 a595b80e7a8b89ab4080215bf8341e77 452 Pfam PF00571 CBS domain 404 451 6.3E-4 T 14-10-2018 IPR000644 CBS domain AMIS_7790 a595b80e7a8b89ab4080215bf8341e77 452 SUPERFAMILY SSF54631 335 451 5.81E-17 T 14-10-2018 AMIS_7790 a595b80e7a8b89ab4080215bf8341e77 452 Gene3D G3DSA:3.40.50.1100 9 302 2.4E-124 T 14-10-2018 AMIS_7790 a595b80e7a8b89ab4080215bf8341e77 452 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 294 1.5E-71 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AMIS_7790 a595b80e7a8b89ab4080215bf8341e77 452 SMART SM00116 337 390 1.8E-4 T 14-10-2018 IPR000644 CBS domain AMIS_7790 a595b80e7a8b89ab4080215bf8341e77 452 SMART SM00116 407 452 2.6 T 14-10-2018 IPR000644 CBS domain AMIS_7790 a595b80e7a8b89ab4080215bf8341e77 452 Gene3D G3DSA:3.40.50.1100 41 154 2.4E-124 T 14-10-2018 AMIS_7790 a595b80e7a8b89ab4080215bf8341e77 452 SUPERFAMILY SSF53686 2 315 8.91E-100 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMIS_7790 a595b80e7a8b89ab4080215bf8341e77 452 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 33 51 - T 14-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 AMIS_7790 a595b80e7a8b89ab4080215bf8341e77 452 TIGRFAM TIGR01137 cysta_beta: cystathionine beta-synthase 5 451 3.4E-199 T 14-10-2018 IPR005857 Cystathionine beta-synthase GO:0004122|GO:0005737|GO:0019343 KEGG: 00260+4.2.1.22|KEGG: 00270+4.2.1.22|MetaCyc: PWY-801 AMIS_43570 59d1b3a7322380222886f7ff2746a2d4 469 Pfam PF00990 Diguanylate cyclase, GGDEF domain 316 463 4.4E-41 T 14-10-2018 IPR000160 GGDEF domain AMIS_43570 59d1b3a7322380222886f7ff2746a2d4 469 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 313 467 2.2E-39 T 14-10-2018 IPR000160 GGDEF domain AMIS_43570 59d1b3a7322380222886f7ff2746a2d4 469 Gene3D G3DSA:3.30.70.270 302 468 2.6E-53 T 14-10-2018 AMIS_43570 59d1b3a7322380222886f7ff2746a2d4 469 SUPERFAMILY SSF55073 321 467 1.02E-44 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_43570 59d1b3a7322380222886f7ff2746a2d4 469 SMART SM00267 305 468 1.7E-60 T 14-10-2018 IPR000160 GGDEF domain AMIS_39470 2251b40bf99a2ea39ea29b2d60c57336 360 Gene3D G3DSA:3.40.109.10 155 360 2.4E-54 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AMIS_39470 2251b40bf99a2ea39ea29b2d60c57336 360 Pfam PF00881 Nitroreductase family 209 334 3.4E-6 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AMIS_39470 2251b40bf99a2ea39ea29b2d60c57336 360 SUPERFAMILY SSF55469 26 101 1.02E-7 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AMIS_39470 2251b40bf99a2ea39ea29b2d60c57336 360 Gene3D G3DSA:3.40.109.10 26 123 6.7E-29 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AMIS_39470 2251b40bf99a2ea39ea29b2d60c57336 360 SUPERFAMILY SSF55469 160 359 5.85E-11 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AMIS_460 a1d097572d95e329a04eae6ceb79140a 453 Gene3D G3DSA:1.10.510.10 93 274 1.1E-47 T 14-10-2018 AMIS_460 a1d097572d95e329a04eae6ceb79140a 453 PIRSF PIRSF000654 17 260 7.2E-23 T 14-10-2018 AMIS_460 a1d097572d95e329a04eae6ceb79140a 453 SUPERFAMILY SSF56112 9 346 4.99E-76 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMIS_460 a1d097572d95e329a04eae6ceb79140a 453 Pfam PF00069 Protein kinase domain 12 261 2.6E-41 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMIS_460 a1d097572d95e329a04eae6ceb79140a 453 SMART SM00220 12 270 3.0E-53 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMIS_460 a1d097572d95e329a04eae6ceb79140a 453 Gene3D G3DSA:3.30.200.20 2 91 5.4E-30 T 14-10-2018 AMIS_460 a1d097572d95e329a04eae6ceb79140a 453 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 131 143 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 AMIS_15790 bf51ddcdbdbb0e2aa7c5a7ed4e25f35a 353 Gene3D G3DSA:3.40.50.300 41 290 9.2E-59 T 14-10-2018 AMIS_15790 bf51ddcdbdbb0e2aa7c5a7ed4e25f35a 353 ProSitePatterns PS00211 ABC transporters family signature. 191 205 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_15790 bf51ddcdbdbb0e2aa7c5a7ed4e25f35a 353 SMART SM00382 68 267 3.6E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_15790 bf51ddcdbdbb0e2aa7c5a7ed4e25f35a 353 SUPERFAMILY SSF52540 42 291 4.57E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_15790 bf51ddcdbdbb0e2aa7c5a7ed4e25f35a 353 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 267 289 5.9E-12 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AMIS_15790 bf51ddcdbdbb0e2aa7c5a7ed4e25f35a 353 Pfam PF00005 ABC transporter 64 219 2.3E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_31000 d476fc3b5646bb188d99f0f769d76753 279 SMART SM00388 28 98 5.4E-5 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_31000 d476fc3b5646bb188d99f0f769d76753 279 SUPERFAMILY SSF55874 100 249 6.29E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_31000 d476fc3b5646bb188d99f0f769d76753 279 SUPERFAMILY SSF47384 33 97 1.43E-8 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_31000 d476fc3b5646bb188d99f0f769d76753 279 Gene3D G3DSA:3.30.565.10 103 252 1.4E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_31000 d476fc3b5646bb188d99f0f769d76753 279 SMART SM00387 143 253 3.0E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_31000 d476fc3b5646bb188d99f0f769d76753 279 Pfam PF00512 His Kinase A (phospho-acceptor) domain 33 97 4.3E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_31000 d476fc3b5646bb188d99f0f769d76753 279 Gene3D G3DSA:1.10.287.130 33 98 9.2E-8 T 14-10-2018 AMIS_31000 d476fc3b5646bb188d99f0f769d76753 279 PRINTS PR00344 Bacterial sensor protein C-terminal signature 179 193 2.2E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_31000 d476fc3b5646bb188d99f0f769d76753 279 PRINTS PR00344 Bacterial sensor protein C-terminal signature 214 232 2.2E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_31000 d476fc3b5646bb188d99f0f769d76753 279 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 143 251 1.8E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_78730 8943b83eca34c084db3f979f09775f29 209 SUPERFAMILY SSF52540 26 201 7.26E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_78730 8943b83eca34c084db3f979f09775f29 209 Gene3D G3DSA:3.40.50.300 22 205 3.9E-15 T 14-10-2018 AMIS_78730 8943b83eca34c084db3f979f09775f29 209 Pfam PF03029 Conserved hypothetical ATP binding protein 33 168 6.1E-19 T 14-10-2018 IPR004130 GPN-loop GTPase AMIS_10350 6fd2286f80832b45218d8c8376e924bd 394 TIGRFAM TIGR02631 xylA_Arthro: xylose isomerase 3 391 1.4E-223 T 14-10-2018 IPR013453 Xylose isomerase, actinobacteria GO:0009045|GO:0042732 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AMIS_10350 6fd2286f80832b45218d8c8376e924bd 394 PRINTS PR00688 Xylose isomerase signature 156 175 2.9E-63 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AMIS_10350 6fd2286f80832b45218d8c8376e924bd 394 PRINTS PR00688 Xylose isomerase signature 82 102 2.9E-63 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AMIS_10350 6fd2286f80832b45218d8c8376e924bd 394 PRINTS PR00688 Xylose isomerase signature 178 202 2.9E-63 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AMIS_10350 6fd2286f80832b45218d8c8376e924bd 394 PRINTS PR00688 Xylose isomerase signature 45 67 2.9E-63 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AMIS_10350 6fd2286f80832b45218d8c8376e924bd 394 PRINTS PR00688 Xylose isomerase signature 129 150 2.9E-63 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AMIS_10350 6fd2286f80832b45218d8c8376e924bd 394 PRINTS PR00688 Xylose isomerase signature 220 247 2.9E-63 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AMIS_10350 6fd2286f80832b45218d8c8376e924bd 394 PRINTS PR00688 Xylose isomerase signature 105 124 2.9E-63 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AMIS_10350 6fd2286f80832b45218d8c8376e924bd 394 PRINTS PR00688 Xylose isomerase signature 286 297 2.9E-63 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AMIS_10350 6fd2286f80832b45218d8c8376e924bd 394 PRINTS PR00688 Xylose isomerase signature 248 259 2.9E-63 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AMIS_10350 6fd2286f80832b45218d8c8376e924bd 394 Gene3D G3DSA:3.20.20.150 2 394 7.7E-144 T 14-10-2018 AMIS_10350 6fd2286f80832b45218d8c8376e924bd 394 SUPERFAMILY SSF51658 4 394 2.76E-111 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily AMIS_10350 6fd2286f80832b45218d8c8376e924bd 394 Hamap MF_00455 Xylose isomerase [xylA]. 1 390 36.746 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AMIS_10350 6fd2286f80832b45218d8c8376e924bd 394 Pfam PF01261 Xylose isomerase-like TIM barrel 42 265 3.6E-28 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AMIS_69350 445a659df5fbfe217fd28af6d9326520 562 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 20 559 9.6E-147 T 14-10-2018 IPR004613 Ribonuclease J GO:0003723|GO:0046872 AMIS_69350 445a659df5fbfe217fd28af6d9326520 562 ProSitePatterns PS01292 Uncharacterized protein family UPF0036 signature. 374 402 - T 14-10-2018 IPR001587 Ribonuclease J, conserved site AMIS_69350 445a659df5fbfe217fd28af6d9326520 562 Gene3D G3DSA:3.40.50.10710 217 375 4.6E-174 T 14-10-2018 AMIS_69350 445a659df5fbfe217fd28af6d9326520 562 Pfam PF00753 Metallo-beta-lactamase superfamily 29 174 7.6E-11 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMIS_69350 445a659df5fbfe217fd28af6d9326520 562 SMART SM00849 31 228 5.2E-22 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMIS_69350 445a659df5fbfe217fd28af6d9326520 562 Hamap MF_01491 Ribonuclease J [rnj]. 14 562 40.997 T 14-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 AMIS_69350 445a659df5fbfe217fd28af6d9326520 562 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 370 415 1.9E-9 T 14-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain AMIS_69350 445a659df5fbfe217fd28af6d9326520 562 SUPERFAMILY SSF56281 19 434 1.83E-93 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMIS_69350 445a659df5fbfe217fd28af6d9326520 562 PIRSF PIRSF004803 14 562 3.8E-200 T 14-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 AMIS_69350 445a659df5fbfe217fd28af6d9326520 562 Gene3D G3DSA:3.10.20.580 459 562 2.7E-15 T 14-10-2018 AMIS_69350 445a659df5fbfe217fd28af6d9326520 562 Gene3D G3DSA:3.60.15.10 20 446 4.6E-174 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMIS_60430 c9338234c165ed4fcf5c52f07aaabc71 1419 TIGRFAM TIGR01443 intein_Cterm: intein C-terminal splicing region 1243 1266 7.1E-4 T 14-10-2018 IPR030934 Intein C-terminal splicing region AMIS_60430 c9338234c165ed4fcf5c52f07aaabc71 1419 SUPERFAMILY SSF51294 1120 1267 1.96E-16 T 14-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AMIS_60430 c9338234c165ed4fcf5c52f07aaabc71 1419 Pfam PF07591 Pretoxin HINT domain 1130 1265 1.4E-18 T 14-10-2018 AMIS_60430 c9338234c165ed4fcf5c52f07aaabc71 1419 Gene3D G3DSA:2.170.16.10 1117 1265 4.6E-41 T 14-10-2018 AMIS_51080 fbcce987fabd705f8112713c8347fb57 167 ProSitePatterns PS01317 SsrA-binding protein. 28 40 - T 14-10-2018 IPR020081 SsrA-binding protein, conserved site AMIS_51080 fbcce987fabd705f8112713c8347fb57 167 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 10 134 5.0E-42 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 AMIS_51080 fbcce987fabd705f8112713c8347fb57 167 Gene3D G3DSA:2.40.280.10 2 130 1.0E-45 T 14-10-2018 IPR023620 Small protein B AMIS_51080 fbcce987fabd705f8112713c8347fb57 167 SUPERFAMILY SSF74982 3 134 2.35E-48 T 14-10-2018 IPR023620 Small protein B AMIS_51080 fbcce987fabd705f8112713c8347fb57 167 Pfam PF01668 SmpB protein 10 151 4.7E-56 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 AMIS_51080 fbcce987fabd705f8112713c8347fb57 167 Hamap MF_00023 SsrA-binding protein [smpB]. 1 157 69.018 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 AMIS_51080 fbcce987fabd705f8112713c8347fb57 167 TIGRFAM TIGR00086 smpB: SsrA-binding protein 10 151 1.4E-53 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 AMIS_36250 6c8c67cafaaaa2727436a8bf3cd47be0 434 Gene3D G3DSA:2.160.20.100 231 408 5.5E-11 T 14-10-2018 AMIS_36250 6c8c67cafaaaa2727436a8bf3cd47be0 434 Pfam PF13576 Pentapeptide repeats (9 copies) 301 348 2.3E-8 T 14-10-2018 IPR001646 Pentapeptide repeat AMIS_36250 6c8c67cafaaaa2727436a8bf3cd47be0 434 Pfam PF13576 Pentapeptide repeats (9 copies) 352 392 1.3E-8 T 14-10-2018 IPR001646 Pentapeptide repeat AMIS_36250 6c8c67cafaaaa2727436a8bf3cd47be0 434 SUPERFAMILY SSF141571 236 361 2.09E-6 T 14-10-2018 AMIS_14680 9f5802fb510761cddda183e93f71aed5 490 Gene3D G3DSA:3.10.50.10 391 451 1.7E-137 T 14-10-2018 IPR029070 Chitinase insertion domain superfamily AMIS_14680 9f5802fb510761cddda183e93f71aed5 490 SMART SM00495 34 80 8.3E-10 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AMIS_14680 9f5802fb510761cddda183e93f71aed5 490 Gene3D G3DSA:2.10.10.20 31 84 2.6E-15 T 14-10-2018 AMIS_14680 9f5802fb510761cddda183e93f71aed5 490 Pfam PF00704 Glycosyl hydrolases family 18 125 476 3.7E-75 T 14-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 AMIS_14680 9f5802fb510761cddda183e93f71aed5 490 SMART SM00636 123 476 4.0E-114 T 14-10-2018 IPR011583 Chitinase II GO:0008061 AMIS_14680 9f5802fb510761cddda183e93f71aed5 490 SUPERFAMILY SSF54556 388 447 1.42E-14 T 14-10-2018 IPR029070 Chitinase insertion domain superfamily AMIS_14680 9f5802fb510761cddda183e93f71aed5 490 ProSitePatterns PS01095 Chitinases family 18 active site. 257 265 - T 14-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AMIS_14680 9f5802fb510761cddda183e93f71aed5 490 Gene3D G3DSA:3.20.20.80 127 479 1.7E-137 T 14-10-2018 AMIS_14680 9f5802fb510761cddda183e93f71aed5 490 SUPERFAMILY SSF51445 119 486 1.05E-82 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_14680 9f5802fb510761cddda183e93f71aed5 490 SUPERFAMILY SSF51055 24 83 2.62E-13 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AMIS_77520 53f9090986611f5684e8faff83ae5e41 240 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 19 232 6.6E-66 T 14-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AMIS_77520 53f9090986611f5684e8faff83ae5e41 240 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 16 233 39.903 T 14-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AMIS_77520 53f9090986611f5684e8faff83ae5e41 240 SUPERFAMILY SSF53448 17 233 1.19E-50 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_77520 53f9090986611f5684e8faff83ae5e41 240 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 17 234 2.6E-65 T 14-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AMIS_77520 53f9090986611f5684e8faff83ae5e41 240 Gene3D G3DSA:3.90.550.10 15 236 1.2E-66 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_77520 53f9090986611f5684e8faff83ae5e41 240 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 112 119 - T 14-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AMIS_73890 f384e78ced58a999b1ace9abdc7ea4a9 74 SUPERFAMILY SSF47598 3 52 2.0E-5 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 AMIS_73890 f384e78ced58a999b1ace9abdc7ea4a9 74 Gene3D G3DSA:1.10.1220.10 9 74 1.2E-20 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AMIS_12120 96469d6f3a29f8bf9e136c292556285a 377 Gene3D G3DSA:1.10.1200.80 262 328 4.7E-10 T 14-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 AMIS_12120 96469d6f3a29f8bf9e136c292556285a 377 PIRSF PIRSF006621 6 340 6.9E-102 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AMIS_12120 96469d6f3a29f8bf9e136c292556285a 377 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 10 330 9.0E-112 T 14-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 AMIS_12120 96469d6f3a29f8bf9e136c292556285a 377 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 99 117 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 AMIS_12120 96469d6f3a29f8bf9e136c292556285a 377 SUPERFAMILY SSF51395 14 327 1.72E-77 T 14-10-2018 AMIS_12120 96469d6f3a29f8bf9e136c292556285a 377 Gene3D G3DSA:3.20.20.70 11 255 4.8E-74 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_12120 96469d6f3a29f8bf9e136c292556285a 377 Pfam PF01207 Dihydrouridine synthase (Dus) 17 324 6.6E-97 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AMIS_10040 95f7767f5d02dc31268e5c02707b2a5f 653 PIRSF PIRSF001084 1 648 4.7E-216 T 14-10-2018 IPR003476 Glycoside hydrolase, family 42 GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AMIS_10040 95f7767f5d02dc31268e5c02707b2a5f 653 Pfam PF02449 Beta-galactosidase 6 372 2.5E-130 T 14-10-2018 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AMIS_10040 95f7767f5d02dc31268e5c02707b2a5f 653 SUPERFAMILY SSF52317 383 584 4.73E-48 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_10040 95f7767f5d02dc31268e5c02707b2a5f 653 Gene3D G3DSA:3.20.20.80 1 377 1.8E-127 T 14-10-2018 AMIS_10040 95f7767f5d02dc31268e5c02707b2a5f 653 Pfam PF08532 Beta-galactosidase trimerisation domain 385 584 6.6E-48 T 14-10-2018 IPR013738 Beta-galactosidase trimerisation GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AMIS_10040 95f7767f5d02dc31268e5c02707b2a5f 653 Gene3D G3DSA:2.60.40.1180 592 647 2.5E-10 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta AMIS_10040 95f7767f5d02dc31268e5c02707b2a5f 653 SUPERFAMILY SSF51445 1 354 1.7E-101 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_10040 95f7767f5d02dc31268e5c02707b2a5f 653 Gene3D G3DSA:3.40.50.880 383 587 4.5E-58 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_3700 ba58386b6316141e1089e957ba476825 208 Gene3D G3DSA:1.10.150.240 17 77 2.4E-28 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AMIS_3700 ba58386b6316141e1089e957ba476825 208 Pfam PF12710 haloacid dehalogenase-like hydrolase 6 158 2.8E-11 T 14-10-2018 AMIS_3700 ba58386b6316141e1089e957ba476825 208 SUPERFAMILY SSF56784 2 198 3.08E-39 T 14-10-2018 IPR036412 HAD-like superfamily AMIS_3700 ba58386b6316141e1089e957ba476825 208 Gene3D G3DSA:3.40.50.1000 7 185 2.4E-28 T 14-10-2018 IPR023214 HAD superfamily AMIS_79900 f12b76618a4dc03d4b9546d99d880c76 187 Gene3D G3DSA:1.10.357.10 1 187 5.1E-55 T 14-10-2018 AMIS_79900 f12b76618a4dc03d4b9546d99d880c76 187 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 55 2.2E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_79900 f12b76618a4dc03d4b9546d99d880c76 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 2.7E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_79900 f12b76618a4dc03d4b9546d99d880c76 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 2.7E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_79900 f12b76618a4dc03d4b9546d99d880c76 187 SUPERFAMILY SSF46689 6 74 1.03E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_69030 e0b6fd5c053545de123f2e9cc3e1c9d0 494 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 10 450 66.908 T 14-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 AMIS_69030 e0b6fd5c053545de123f2e9cc3e1c9d0 494 Pfam PF04055 Radical SAM superfamily 157 328 7.6E-29 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMIS_69030 e0b6fd5c053545de123f2e9cc3e1c9d0 494 SUPERFAMILY SSF102114 139 376 1.31E-57 T 14-10-2018 AMIS_69030 e0b6fd5c053545de123f2e9cc3e1c9d0 494 Gene3D G3DSA:3.80.30.20 150 385 7.2E-89 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe AMIS_69030 e0b6fd5c053545de123f2e9cc3e1c9d0 494 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 12 445 2.2E-143 T 14-10-2018 AMIS_69030 e0b6fd5c053545de123f2e9cc3e1c9d0 494 Gene3D G3DSA:3.40.50.12160 11 140 5.0E-33 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily AMIS_69030 e0b6fd5c053545de123f2e9cc3e1c9d0 494 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 11 445 2.6E-150 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 AMIS_69030 e0b6fd5c053545de123f2e9cc3e1c9d0 494 SMART SM00729 153 372 1.9E-58 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AMIS_69030 e0b6fd5c053545de123f2e9cc3e1c9d0 494 Pfam PF00919 Uncharacterized protein family UPF0004 13 110 1.5E-27 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 AMIS_69030 e0b6fd5c053545de123f2e9cc3e1c9d0 494 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 157 177 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 AMIS_18440 7c20f6299aec1ac4fa6579e61c80b42d 434 Gene3D G3DSA:3.40.50.1100 46 153 3.0E-65 T 14-10-2018 AMIS_18440 7c20f6299aec1ac4fa6579e61c80b42d 434 Pfam PF00581 Rhodanese-like domain 345 426 6.1E-12 T 14-10-2018 IPR001763 Rhodanese-like domain AMIS_18440 7c20f6299aec1ac4fa6579e61c80b42d 434 Gene3D G3DSA:3.40.50.1100 13 303 3.0E-65 T 14-10-2018 AMIS_18440 7c20f6299aec1ac4fa6579e61c80b42d 434 SMART SM00450 332 430 3.4E-15 T 14-10-2018 IPR001763 Rhodanese-like domain AMIS_18440 7c20f6299aec1ac4fa6579e61c80b42d 434 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 6 296 5.4E-47 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AMIS_18440 7c20f6299aec1ac4fa6579e61c80b42d 434 Gene3D G3DSA:3.40.250.10 339 434 1.0E-20 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily AMIS_18440 7c20f6299aec1ac4fa6579e61c80b42d 434 SUPERFAMILY SSF53686 2 307 8.51E-60 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMIS_18440 7c20f6299aec1ac4fa6579e61c80b42d 434 SUPERFAMILY SSF52821 329 433 8.77E-24 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily AMIS_22350 e11f5a3feb6a1237e6cc0a7a693f7127 272 PRINTS PR00412 Epoxide hydrolase signature 47 62 6.6E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_22350 e11f5a3feb6a1237e6cc0a7a693f7127 272 PRINTS PR00412 Epoxide hydrolase signature 210 226 6.6E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_22350 e11f5a3feb6a1237e6cc0a7a693f7127 272 PRINTS PR00412 Epoxide hydrolase signature 27 45 6.6E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_22350 e11f5a3feb6a1237e6cc0a7a693f7127 272 SUPERFAMILY SSF53474 1 268 8.88E-63 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_22350 e11f5a3feb6a1237e6cc0a7a693f7127 272 Gene3D G3DSA:3.40.50.1820 3 269 5.4E-81 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_22350 e11f5a3feb6a1237e6cc0a7a693f7127 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 212 226 1.2E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_22350 e11f5a3feb6a1237e6cc0a7a693f7127 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 91 104 1.2E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_22350 e11f5a3feb6a1237e6cc0a7a693f7127 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 47 62 1.2E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_22350 e11f5a3feb6a1237e6cc0a7a693f7127 272 Pfam PF00561 alpha/beta hydrolase fold 22 250 2.5E-25 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_9280 973b3e675a1f240ffa03a3f4ac86d087 161 SMART SM00347 37 140 1.5E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_9280 973b3e675a1f240ffa03a3f4ac86d087 161 Gene3D G3DSA:1.10.10.10 11 157 1.3E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_9280 973b3e675a1f240ffa03a3f4ac86d087 161 SUPERFAMILY SSF46785 6 152 1.33E-27 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_9280 973b3e675a1f240ffa03a3f4ac86d087 161 Pfam PF01047 MarR family 44 103 4.5E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_71680 29214c550f90f240de43a91f34a496c4 405 ProSitePatterns PS00099 Thiolases active site. 375 388 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 AMIS_71680 29214c550f90f240de43a91f34a496c4 405 SUPERFAMILY SSF53901 7 271 2.03E-80 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_71680 29214c550f90f240de43a91f34a496c4 405 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 AMIS_71680 29214c550f90f240de43a91f34a496c4 405 Pfam PF02803 Thiolase, C-terminal domain 272 392 2.6E-43 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 AMIS_71680 29214c550f90f240de43a91f34a496c4 405 SUPERFAMILY SSF53901 273 392 2.66E-35 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_71680 29214c550f90f240de43a91f34a496c4 405 Gene3D G3DSA:3.40.47.10 128 390 1.8E-139 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_71680 29214c550f90f240de43a91f34a496c4 405 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 8 392 2.3E-132 T 14-10-2018 IPR002155 Thiolase GO:0016747 AMIS_71680 29214c550f90f240de43a91f34a496c4 405 ProSitePatterns PS00737 Thiolases signature 2. 340 356 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 AMIS_71680 29214c550f90f240de43a91f34a496c4 405 Gene3D G3DSA:3.40.47.10 7 277 1.8E-139 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_71680 29214c550f90f240de43a91f34a496c4 405 Pfam PF00108 Thiolase, N-terminal domain 7 263 2.0E-90 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 AMIS_71680 29214c550f90f240de43a91f34a496c4 405 PIRSF PIRSF000429 3 395 3.8E-114 T 14-10-2018 IPR002155 Thiolase GO:0016747 AMIS_65410 cf9ed900d1277004f8862b3032f5fb7d 490 Gene3D G3DSA:1.20.144.10 138 238 8.7E-22 T 14-10-2018 AMIS_65410 cf9ed900d1277004f8862b3032f5fb7d 490 Gene3D G3DSA:1.20.144.10 380 487 7.7E-17 T 14-10-2018 AMIS_65410 cf9ed900d1277004f8862b3032f5fb7d 490 SMART SM00014 107 219 1.2E-17 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMIS_65410 cf9ed900d1277004f8862b3032f5fb7d 490 SMART SM00014 346 458 2.8E-11 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMIS_65410 cf9ed900d1277004f8862b3032f5fb7d 490 Pfam PF01569 PAP2 superfamily 349 460 1.5E-12 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMIS_65410 cf9ed900d1277004f8862b3032f5fb7d 490 Pfam PF01569 PAP2 superfamily 107 223 1.1E-16 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMIS_65410 cf9ed900d1277004f8862b3032f5fb7d 490 SUPERFAMILY SSF48317 36 229 2.09E-33 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily AMIS_65410 cf9ed900d1277004f8862b3032f5fb7d 490 SUPERFAMILY SSF48317 269 463 2.35E-27 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily AMIS_64500 bca188f2ef42ce2847e7f7c3199b4750 839 Gene3D G3DSA:3.30.1360.40 249 362 1.6E-181 T 14-10-2018 AMIS_64500 bca188f2ef42ce2847e7f7c3199b4750 839 Gene3D G3DSA:3.90.199.10 46 515 1.6E-181 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 AMIS_64500 bca188f2ef42ce2847e7f7c3199b4750 839 Gene3D G3DSA:1.10.268.10 399 487 1.6E-181 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AMIS_64500 bca188f2ef42ce2847e7f7c3199b4750 839 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 588 607 2.6 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AMIS_64500 bca188f2ef42ce2847e7f7c3199b4750 839 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 759 793 0.017 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AMIS_64500 bca188f2ef42ce2847e7f7c3199b4750 839 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 695 740 0.014 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AMIS_64500 bca188f2ef42ce2847e7f7c3199b4750 839 SUPERFAMILY SSF56719 45 516 2.22E-151 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AMIS_64500 bca188f2ef42ce2847e7f7c3199b4750 839 SMART SM00434 25 494 2.0E-227 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AMIS_64500 bca188f2ef42ce2847e7f7c3199b4750 839 SUPERFAMILY SSF101904 536 797 3.53E-40 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AMIS_64500 bca188f2ef42ce2847e7f7c3199b4750 839 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 46 501 3.0E-138 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AMIS_64500 bca188f2ef42ce2847e7f7c3199b4750 839 Gene3D G3DSA:2.120.10.90 536 800 2.3E-47 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AMIS_27990 ebd57c35319dc7305ae6e58d03fd1099 350 SUPERFAMILY SSF75005 52 348 2.57E-70 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMIS_27990 ebd57c35319dc7305ae6e58d03fd1099 350 Gene3D G3DSA:2.115.10.20 56 349 6.5E-83 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMIS_27990 ebd57c35319dc7305ae6e58d03fd1099 350 PIRSF PIRSF026534 37 350 4.6E-100 T 14-10-2018 IPR016840 Glycoside hydrolase, family 43, endo-1, 5-alpha-L-arabinosidase GO:0046558 AMIS_27990 ebd57c35319dc7305ae6e58d03fd1099 350 Pfam PF04616 Glycosyl hydrolases family 43 71 332 1.1E-46 T 14-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 AMIS_54770 c4212f7092606a3aeb3e79bb1cdb1fe7 985 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 311 855 6.1E-166 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMIS_54770 c4212f7092606a3aeb3e79bb1cdb1fe7 985 Gene3D G3DSA:1.20.58.180 206 286 4.3E-24 T 14-10-2018 AMIS_54770 c4212f7092606a3aeb3e79bb1cdb1fe7 985 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 309 973 2.8E-155 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMIS_54770 c4212f7092606a3aeb3e79bb1cdb1fe7 985 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 308 982 20.058 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMIS_54770 c4212f7092606a3aeb3e79bb1cdb1fe7 985 SUPERFAMILY SSF109604 652 790 1.62E-11 T 14-10-2018 AMIS_54770 c4212f7092606a3aeb3e79bb1cdb1fe7 985 SUPERFAMILY SSF55681 3 281 5.22E-106 T 14-10-2018 AMIS_54770 c4212f7092606a3aeb3e79bb1cdb1fe7 985 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 3 287 3.6E-117 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMIS_54770 c4212f7092606a3aeb3e79bb1cdb1fe7 985 Gene3D G3DSA:3.30.930.10 1 205 1.1E-99 T 14-10-2018 AMIS_54770 c4212f7092606a3aeb3e79bb1cdb1fe7 985 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 2 282 49.088 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMIS_54770 c4212f7092606a3aeb3e79bb1cdb1fe7 985 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 4 280 1.2E-123 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMIS_54770 c4212f7092606a3aeb3e79bb1cdb1fe7 985 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 56 71 2.8E-55 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMIS_54770 c4212f7092606a3aeb3e79bb1cdb1fe7 985 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 134 154 2.8E-55 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMIS_54770 c4212f7092606a3aeb3e79bb1cdb1fe7 985 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 157 172 2.8E-55 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMIS_54770 c4212f7092606a3aeb3e79bb1cdb1fe7 985 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 242 258 2.8E-55 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMIS_54770 c4212f7092606a3aeb3e79bb1cdb1fe7 985 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 108 132 2.8E-55 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMIS_54770 c4212f7092606a3aeb3e79bb1cdb1fe7 985 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 77 97 2.8E-55 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMIS_61570 09ccbf6d33ea668c1bce746c1f572a49 390 SUPERFAMILY SSF56266 5 386 1.7E-127 T 14-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 AMIS_61570 09ccbf6d33ea668c1bce746c1f572a49 390 Gene3D G3DSA:3.30.2330.10 186 264 5.1E-26 T 14-10-2018 AMIS_61570 09ccbf6d33ea668c1bce746c1f572a49 390 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 17 388 7.0E-137 T 14-10-2018 AMIS_61570 09ccbf6d33ea668c1bce746c1f572a49 390 Pfam PF01960 ArgJ family 11 390 4.7E-131 T 14-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 AMIS_61570 09ccbf6d33ea668c1bce746c1f572a49 390 Gene3D G3DSA:3.10.20.340 265 390 7.4E-43 T 14-10-2018 AMIS_61570 09ccbf6d33ea668c1bce746c1f572a49 390 Gene3D G3DSA:3.60.70.12 1 185 3.1E-62 T 14-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 AMIS_61570 09ccbf6d33ea668c1bce746c1f572a49 390 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 2 389 8.8E-107 T 14-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 AMIS_61570 09ccbf6d33ea668c1bce746c1f572a49 390 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 390 136.385 T 14-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 AMIS_80790 f45dda955f467367ca9bd1eecd542459 151 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 1 135 2.0E-30 T 14-10-2018 IPR001453 MoaB/Mog domain AMIS_80790 f45dda955f467367ca9bd1eecd542459 151 Pfam PF00994 Probable molybdopterin binding domain 1 141 5.9E-29 T 14-10-2018 IPR001453 MoaB/Mog domain AMIS_80790 f45dda955f467367ca9bd1eecd542459 151 Gene3D G3DSA:3.40.980.10 1 151 1.4E-49 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily AMIS_80790 f45dda955f467367ca9bd1eecd542459 151 SUPERFAMILY SSF53218 1 147 1.2E-40 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily AMIS_80790 f45dda955f467367ca9bd1eecd542459 151 SMART SM00852 1 142 3.8E-21 T 14-10-2018 IPR001453 MoaB/Mog domain AMIS_43460 2a89939d78a7740ec3c071b7c1b9ea36 350 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 267 339 5.8E-14 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AMIS_43460 2a89939d78a7740ec3c071b7c1b9ea36 350 SUPERFAMILY SSF52343 95 234 2.36E-30 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMIS_43460 2a89939d78a7740ec3c071b7c1b9ea36 350 SUPERFAMILY SSF54292 232 347 4.06E-26 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AMIS_43460 2a89939d78a7740ec3c071b7c1b9ea36 350 Gene3D G3DSA:3.40.50.80 111 243 6.6E-29 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMIS_43460 2a89939d78a7740ec3c071b7c1b9ea36 350 PRINTS PR00410 Phenol hydroxylase reductase family signature 57 64 1.4E-5 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AMIS_43460 2a89939d78a7740ec3c071b7c1b9ea36 350 PRINTS PR00410 Phenol hydroxylase reductase family signature 210 218 1.4E-5 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AMIS_43460 2a89939d78a7740ec3c071b7c1b9ea36 350 PRINTS PR00410 Phenol hydroxylase reductase family signature 115 134 1.4E-5 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AMIS_43460 2a89939d78a7740ec3c071b7c1b9ea36 350 TIGRFAM TIGR02160 PA_CoA_Oxy5: phenylacetate-CoA oxygenase/reductase, PaaK subunit 6 349 7.1E-137 T 14-10-2018 IPR011884 Phenylacetate-CoA oxygenase/reductase, PaaK subunit GO:0010124 AMIS_43460 2a89939d78a7740ec3c071b7c1b9ea36 350 Gene3D G3DSA:3.10.20.30 248 350 3.8E-28 T 14-10-2018 IPR012675 Beta-grasp domain superfamily AMIS_43460 2a89939d78a7740ec3c071b7c1b9ea36 350 Pfam PF00970 Oxidoreductase FAD-binding domain 9 104 2.1E-8 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 AMIS_43460 2a89939d78a7740ec3c071b7c1b9ea36 350 Gene3D G3DSA:2.40.30.10 2 102 6.8E-17 T 14-10-2018 AMIS_43460 2a89939d78a7740ec3c071b7c1b9ea36 350 SUPERFAMILY SSF63380 5 105 2.51E-19 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AMIS_43460 2a89939d78a7740ec3c071b7c1b9ea36 350 Pfam PF00175 Oxidoreductase NAD-binding domain 116 224 1.2E-17 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AMIS_43460 2a89939d78a7740ec3c071b7c1b9ea36 350 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 297 305 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AMIS_23100 8e13839760d38ba99cd532338dd01487 289 SMART SM00382 32 233 1.1E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_23100 8e13839760d38ba99cd532338dd01487 289 Gene3D G3DSA:3.40.50.300 2 281 5.3E-63 T 14-10-2018 AMIS_23100 8e13839760d38ba99cd532338dd01487 289 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_23100 8e13839760d38ba99cd532338dd01487 289 SUPERFAMILY SSF52540 4 224 1.86E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_23100 8e13839760d38ba99cd532338dd01487 289 Pfam PF00005 ABC transporter 23 173 1.2E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_36890 e91ef180e54a2ce9b6f3d581de92e793 703 Pfam PF09137 Glucodextranase, domain N 36 279 3.7E-67 T 14-10-2018 IPR015220 Glucodextranase, N-terminal KEGG: 00500+3.2.1.3|MetaCyc: PWY-5941 AMIS_36890 e91ef180e54a2ce9b6f3d581de92e793 703 SUPERFAMILY SSF48208 291 694 1.07E-67 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AMIS_36890 e91ef180e54a2ce9b6f3d581de92e793 703 SUPERFAMILY SSF74650 35 283 9.1E-54 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 AMIS_36890 e91ef180e54a2ce9b6f3d581de92e793 703 Gene3D G3DSA:1.50.10.10 285 698 8.2E-149 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 AMIS_36890 e91ef180e54a2ce9b6f3d581de92e793 703 Pfam PF00723 Glycosyl hydrolases family 15 373 676 8.2E-18 T 14-10-2018 IPR011613 GH15-like domain Reactome: R-HSA-70221 AMIS_36890 e91ef180e54a2ce9b6f3d581de92e793 703 Gene3D G3DSA:2.70.98.10 33 283 5.1E-62 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AMIS_59100 b102d241842fc6519007b6a56f0e833c 195 Gene3D G3DSA:1.20.120.450 5 163 1.4E-32 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes AMIS_59100 b102d241842fc6519007b6a56f0e833c 195 Pfam PF04978 Protein of unknown function (DUF664) 9 160 5.1E-47 T 14-10-2018 IPR007061 Protein of unknown function DUF664 AMIS_59100 b102d241842fc6519007b6a56f0e833c 195 SUPERFAMILY SSF109854 5 159 1.02E-39 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes AMIS_11730 0b035c7ce85265d3138d50182c86aef7 105 Pfam PF09685 Domain of unknown function (DUF4870) 3 104 1.1E-23 T 14-10-2018 IPR019109 Protein of unknown function DUF4870 AMIS_30290 ec35e50e7878f5b97f9d66fadde364fb 271 SMART SM00422 5 75 1.4E-12 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_30290 ec35e50e7878f5b97f9d66fadde364fb 271 SUPERFAMILY SSF55136 118 266 1.1E-10 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily AMIS_30290 ec35e50e7878f5b97f9d66fadde364fb 271 SUPERFAMILY SSF46955 5 110 6.23E-20 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily AMIS_30290 ec35e50e7878f5b97f9d66fadde364fb 271 Pfam PF06445 GyrI-like small molecule binding domain 118 265 2.7E-9 T 14-10-2018 IPR029442 GyrI-like small molecule binding domain AMIS_30290 ec35e50e7878f5b97f9d66fadde364fb 271 Gene3D G3DSA:1.10.1660.10 3 116 1.5E-21 T 14-10-2018 AMIS_30290 ec35e50e7878f5b97f9d66fadde364fb 271 Gene3D G3DSA:3.20.80.10 117 266 4.9E-21 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily AMIS_30290 ec35e50e7878f5b97f9d66fadde364fb 271 Pfam PF13411 MerR HTH family regulatory protein 6 72 2.6E-12 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_30290 ec35e50e7878f5b97f9d66fadde364fb 271 SMART SM00871 116 266 3.9E-11 T 14-10-2018 IPR010499 Bacterial transcription activator, effector binding AMIS_66850 0024ac01a4d12a63728320184e464372 479 Pfam PF05762 VWA domain containing CoxE-like protein 255 460 1.2E-25 T 14-10-2018 IPR008912 Uncharacterised protein family CoxE-like AMIS_66850 0024ac01a4d12a63728320184e464372 479 SUPERFAMILY SSF53300 315 448 3.78E-14 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMIS_66850 0024ac01a4d12a63728320184e464372 479 SMART SM00327 316 474 0.006 T 14-10-2018 IPR002035 von Willebrand factor, type A AMIS_66850 0024ac01a4d12a63728320184e464372 479 Gene3D G3DSA:3.40.50.410 311 472 3.6E-6 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMIS_21730 ee91b9e943bd7b7fe58d6e1323767bb9 334 Gene3D G3DSA:3.60.15.10 3 262 2.7E-63 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMIS_21730 ee91b9e943bd7b7fe58d6e1323767bb9 334 Pfam PF00753 Metallo-beta-lactamase superfamily 21 234 4.4E-26 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMIS_21730 ee91b9e943bd7b7fe58d6e1323767bb9 334 SUPERFAMILY SSF56281 20 321 2.88E-55 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMIS_21730 ee91b9e943bd7b7fe58d6e1323767bb9 334 SMART SM00849 22 234 1.2E-25 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMIS_50420 09a5a7eebe5f5de066ec107873ca3bba 403 Gene3D G3DSA:3.40.47.10 255 403 4.4E-33 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_50420 09a5a7eebe5f5de066ec107873ca3bba 403 Gene3D G3DSA:3.40.47.10 2 254 3.4E-57 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_50420 09a5a7eebe5f5de066ec107873ca3bba 403 SUPERFAMILY SSF53901 4 247 1.7E-57 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_50420 09a5a7eebe5f5de066ec107873ca3bba 403 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 6 240 1.3E-34 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AMIS_50420 09a5a7eebe5f5de066ec107873ca3bba 403 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 250 354 3.6E-18 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal AMIS_50420 09a5a7eebe5f5de066ec107873ca3bba 403 SUPERFAMILY SSF53901 210 399 1.24E-39 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_4880 f21f6b3e72698f549ac32ab811d12490 335 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 23 34 - T 14-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMIS_4880 f21f6b3e72698f549ac32ab811d12490 335 Pfam PF04055 Radical SAM superfamily 21 153 9.4E-15 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMIS_4880 f21f6b3e72698f549ac32ab811d12490 335 SUPERFAMILY SSF102114 16 330 1.44E-51 T 14-10-2018 AMIS_4880 f21f6b3e72698f549ac32ab811d12490 335 SMART SM00729 17 228 5.8E-4 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AMIS_4880 f21f6b3e72698f549ac32ab811d12490 335 Pfam PF13186 Iron-sulfur cluster-binding domain 263 328 6.2E-15 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain AMIS_70000 e8be3776c8b81a5288181912b473b32d 516 Gene3D G3DSA:2.102.10.10 453 514 3.8E-10 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AMIS_70000 e8be3776c8b81a5288181912b473b32d 516 SUPERFAMILY SSF50022 464 506 7.07E-12 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AMIS_70000 e8be3776c8b81a5288181912b473b32d 516 Gene3D G3DSA:3.60.15.10 1 256 1.7E-25 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMIS_70000 e8be3776c8b81a5288181912b473b32d 516 SUPERFAMILY SSF56281 2 229 6.72E-16 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMIS_70000 e8be3776c8b81a5288181912b473b32d 516 Pfam PF13483 Beta-lactamase superfamily domain 3 81 6.9E-7 T 14-10-2018 AMIS_70000 e8be3776c8b81a5288181912b473b32d 516 Pfam PF00355 Rieske [2Fe-2S] domain 464 505 2.4E-8 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AMIS_62080 81d93371debb10d626316064d4556277 87 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 10 79 3.5E-23 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMIS_62080 81d93371debb10d626316064d4556277 87 SMART SM01409 17 81 1.9E-13 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 AMIS_62080 81d93371debb10d626316064d4556277 87 Pfam PF01192 RNA polymerase Rpb6 17 79 3.7E-13 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 AMIS_62080 81d93371debb10d626316064d4556277 87 Gene3D G3DSA:3.90.940.10 10 87 1.9E-20 T 14-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 AMIS_62080 81d93371debb10d626316064d4556277 87 SUPERFAMILY SSF63562 10 85 2.44E-24 T 14-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 AMIS_62080 81d93371debb10d626316064d4556277 87 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 10 82 14.882 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMIS_53690 9bd9c8ec126aeeccfda96a6e82ea5c1d 283 Pfam PF00072 Response regulator receiver domain 89 175 1.4E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_53690 9bd9c8ec126aeeccfda96a6e82ea5c1d 283 SUPERFAMILY SSF52172 87 189 4.13E-20 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_53690 9bd9c8ec126aeeccfda96a6e82ea5c1d 283 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 244 256 1.2E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_53690 9bd9c8ec126aeeccfda96a6e82ea5c1d 283 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 214 228 1.2E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_53690 9bd9c8ec126aeeccfda96a6e82ea5c1d 283 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 228 244 1.2E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_53690 9bd9c8ec126aeeccfda96a6e82ea5c1d 283 Pfam PF00196 Bacterial regulatory proteins, luxR family 213 268 2.7E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_53690 9bd9c8ec126aeeccfda96a6e82ea5c1d 283 Gene3D G3DSA:1.10.10.10 158 281 3.2E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_53690 9bd9c8ec126aeeccfda96a6e82ea5c1d 283 SMART SM00421 211 268 6.5E-23 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_53690 9bd9c8ec126aeeccfda96a6e82ea5c1d 283 SMART SM00448 61 174 3.0E-9 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_53690 9bd9c8ec126aeeccfda96a6e82ea5c1d 283 ProSitePatterns PS00622 LuxR-type HTH domain signature. 228 255 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_53690 9bd9c8ec126aeeccfda96a6e82ea5c1d 283 SUPERFAMILY SSF46894 207 275 3.74E-22 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_55650 dd6006a07213063e5beeb6f95a1a04d5 494 ProDom PD018364 ISOMERASE L-ARABINOSE ARABINOSE METABOLISM CARBOHYDRATE CATABOLISM ARAA 5 297 6.0E-112 T 14-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 AMIS_55650 dd6006a07213063e5beeb6f95a1a04d5 494 PIRSF PIRSF001478 1 490 1.1E-223 T 14-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 AMIS_55650 dd6006a07213063e5beeb6f95a1a04d5 494 Pfam PF02610 L-arabinose isomerase 3 350 3.6E-164 T 14-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 AMIS_55650 dd6006a07213063e5beeb6f95a1a04d5 494 Pfam PF11762 L-arabinose isomerase C-terminal domain 354 466 2.0E-47 T 14-10-2018 IPR024664 L-arabinose isomerase, C-terminal KEGG: 00040+5.3.1.4 AMIS_55650 dd6006a07213063e5beeb6f95a1a04d5 494 SUPERFAMILY SSF53743 3 319 3.66E-111 T 14-10-2018 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily GO:0005737|GO:0005996|GO:0016861 AMIS_55650 dd6006a07213063e5beeb6f95a1a04d5 494 SUPERFAMILY SSF50443 320 488 1.07E-68 T 14-10-2018 IPR004216 L-fucose/L-arabinose isomerase, C-terminal AMIS_55650 dd6006a07213063e5beeb6f95a1a04d5 494 Gene3D G3DSA:3.40.50.10940 1 170 1.5E-70 T 14-10-2018 IPR038583 L-arabinose isomerase, N-terminal domain superfamily KEGG: 00040+5.3.1.4 AMIS_55650 dd6006a07213063e5beeb6f95a1a04d5 494 Hamap MF_00519 L-arabinose isomerase [araA]. 1 467 61.57 T 14-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 AMIS_64790 fdb59187198414cbc0f54ca1dfd83c69 545 PRINTS PR00723 Subtilisin serine protease family (S8) signature 110 129 5.7E-22 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMIS_64790 fdb59187198414cbc0f54ca1dfd83c69 545 PRINTS PR00723 Subtilisin serine protease family (S8) signature 149 162 5.7E-22 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMIS_64790 fdb59187198414cbc0f54ca1dfd83c69 545 PRINTS PR00723 Subtilisin serine protease family (S8) signature 310 326 5.7E-22 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMIS_64790 fdb59187198414cbc0f54ca1dfd83c69 545 Pfam PF00082 Subtilase family 110 361 1.3E-56 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AMIS_64790 fdb59187198414cbc0f54ca1dfd83c69 545 Gene3D G3DSA:3.40.50.200 54 376 3.3E-104 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AMIS_64790 fdb59187198414cbc0f54ca1dfd83c69 545 SUPERFAMILY SSF52743 92 376 1.18E-95 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AMIS_64790 fdb59187198414cbc0f54ca1dfd83c69 545 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 153 163 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site AMIS_64790 fdb59187198414cbc0f54ca1dfd83c69 545 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 311 321 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site AMIS_64790 fdb59187198414cbc0f54ca1dfd83c69 545 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 115 126 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site AMIS_49850 5187401f34cf210f0806821b58758206 778 Gene3D G3DSA:1.10.8.60 497 584 7.8E-22 T 14-10-2018 AMIS_49850 5187401f34cf210f0806821b58758206 778 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 676 684 - T 14-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 AMIS_49850 5187401f34cf210f0806821b58758206 778 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 19 198 2.4E-14 T 14-10-2018 IPR003111 Lon, substrate-binding domain AMIS_49850 5187401f34cf210f0806821b58758206 778 PIRSF PIRSF001174 7 774 1.2E-245 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 AMIS_49850 5187401f34cf210f0806821b58758206 778 SMART SM00464 18 200 1.3E-26 T 14-10-2018 IPR003111 Lon, substrate-binding domain AMIS_49850 5187401f34cf210f0806821b58758206 778 Gene3D G3DSA:1.20.58.1480 121 243 1.8E-25 T 14-10-2018 AMIS_49850 5187401f34cf210f0806821b58758206 778 Gene3D G3DSA:3.30.230.10 594 776 2.6E-73 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMIS_49850 5187401f34cf210f0806821b58758206 778 SUPERFAMILY SSF88697 18 198 3.98E-17 T 14-10-2018 IPR015947 PUA-like superfamily AMIS_49850 5187401f34cf210f0806821b58758206 778 SMART SM00382 353 497 2.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_49850 5187401f34cf210f0806821b58758206 778 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 570 771 1.1E-81 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 AMIS_49850 5187401f34cf210f0806821b58758206 778 Gene3D G3DSA:3.40.50.300 309 496 8.2E-61 T 14-10-2018 AMIS_49850 5187401f34cf210f0806821b58758206 778 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 673 692 9.5E-49 T 14-10-2018 AMIS_49850 5187401f34cf210f0806821b58758206 778 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 595 611 9.5E-49 T 14-10-2018 AMIS_49850 5187401f34cf210f0806821b58758206 778 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 361 380 9.5E-49 T 14-10-2018 AMIS_49850 5187401f34cf210f0806821b58758206 778 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 703 722 9.5E-49 T 14-10-2018 AMIS_49850 5187401f34cf210f0806821b58758206 778 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 726 744 9.5E-49 T 14-10-2018 AMIS_49850 5187401f34cf210f0806821b58758206 778 Gene3D G3DSA:2.30.130.40 14 109 1.3E-6 T 14-10-2018 AMIS_49850 5187401f34cf210f0806821b58758206 778 SUPERFAMILY SSF52540 304 579 2.72E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_49850 5187401f34cf210f0806821b58758206 778 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 357 493 3.7E-21 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMIS_49850 5187401f34cf210f0806821b58758206 778 TIGRFAM TIGR00763 lon: endopeptidase La 124 771 5.1E-240 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 AMIS_49850 5187401f34cf210f0806821b58758206 778 Hamap MF_01973 Lon protease [lon]. 19 772 58.769 T 14-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 AMIS_49850 5187401f34cf210f0806821b58758206 778 SUPERFAMILY SSF54211 595 770 1.21E-48 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMIS_65030 0fa1d7b3f56b2f9be9ce7974899d0897 907 Gene3D G3DSA:3.20.20.80 452 606 2.3E-17 T 14-10-2018 AMIS_65030 0fa1d7b3f56b2f9be9ce7974899d0897 907 SUPERFAMILY SSF51445 270 813 1.41E-67 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_65030 0fa1d7b3f56b2f9be9ce7974899d0897 907 Gene3D G3DSA:2.60.40.10 131 233 1.9E-29 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_65030 0fa1d7b3f56b2f9be9ce7974899d0897 907 Gene3D G3DSA:3.20.20.80 611 765 5.8E-8 T 14-10-2018 AMIS_65030 0fa1d7b3f56b2f9be9ce7974899d0897 907 Gene3D G3DSA:3.20.20.80 269 449 8.3E-43 T 14-10-2018 AMIS_65030 0fa1d7b3f56b2f9be9ce7974899d0897 907 SMART SM00642 278 804 2.5E-41 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMIS_65030 0fa1d7b3f56b2f9be9ce7974899d0897 907 Pfam PF00128 Alpha amylase, catalytic domain 507 742 2.7E-11 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMIS_65030 0fa1d7b3f56b2f9be9ce7974899d0897 907 Pfam PF00128 Alpha amylase, catalytic domain 313 421 3.8E-24 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMIS_65030 0fa1d7b3f56b2f9be9ce7974899d0897 907 Gene3D G3DSA:2.60.40.10 30 130 1.9E-30 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_65030 0fa1d7b3f56b2f9be9ce7974899d0897 907 SMART SM01066 35 115 6.3E-21 T 14-10-2018 IPR005085 Carbohydrate binding module family 25 GO:2001070 AMIS_65030 0fa1d7b3f56b2f9be9ce7974899d0897 907 SMART SM01066 133 211 7.2E-18 T 14-10-2018 IPR005085 Carbohydrate binding module family 25 GO:2001070 AMIS_65030 0fa1d7b3f56b2f9be9ce7974899d0897 907 Pfam PF03423 Carbohydrate binding domain (family 25) 35 126 5.6E-25 T 14-10-2018 IPR005085 Carbohydrate binding module family 25 GO:2001070 AMIS_65030 0fa1d7b3f56b2f9be9ce7974899d0897 907 Pfam PF03423 Carbohydrate binding domain (family 25) 131 230 1.2E-27 T 14-10-2018 IPR005085 Carbohydrate binding module family 25 GO:2001070 AMIS_17000 61b083e54b9b9d39afae2a7eae045b25 1214 Pfam PF02607 B12 binding domain 656 728 3.2E-25 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMIS_17000 61b083e54b9b9d39afae2a7eae045b25 1214 Gene3D G3DSA:3.10.196.10 907 1208 1.6E-115 T 14-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMIS_17000 61b083e54b9b9d39afae2a7eae045b25 1214 SUPERFAMILY SSF56507 905 1213 1.7E-106 T 14-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMIS_17000 61b083e54b9b9d39afae2a7eae045b25 1214 Gene3D G3DSA:3.40.50.280 748 899 2.5E-51 T 14-10-2018 AMIS_17000 61b083e54b9b9d39afae2a7eae045b25 1214 Pfam PF02310 B12 binding domain 752 844 5.9E-18 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 AMIS_17000 61b083e54b9b9d39afae2a7eae045b25 1214 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 939 1194 1.0E-100 T 14-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMIS_17000 61b083e54b9b9d39afae2a7eae045b25 1214 SUPERFAMILY SSF47644 647 734 1.28E-28 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMIS_17000 61b083e54b9b9d39afae2a7eae045b25 1214 SUPERFAMILY SSF51717 355 628 3.66E-82 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMIS_17000 61b083e54b9b9d39afae2a7eae045b25 1214 SUPERFAMILY SSF82282 9 398 1.44E-114 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 AMIS_17000 61b083e54b9b9d39afae2a7eae045b25 1214 Pfam PF02574 Homocysteine S-methyltransferase 20 324 2.0E-76 T 14-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 AMIS_17000 61b083e54b9b9d39afae2a7eae045b25 1214 Gene3D G3DSA:3.20.20.20 339 640 7.0E-123 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMIS_17000 61b083e54b9b9d39afae2a7eae045b25 1214 PIRSF PIRSF000381 4 1182 0.0 T 14-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMIS_17000 61b083e54b9b9d39afae2a7eae045b25 1214 Gene3D G3DSA:3.20.20.330 4 338 2.6E-124 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 AMIS_17000 61b083e54b9b9d39afae2a7eae045b25 1214 SUPERFAMILY SSF52242 747 898 3.92E-43 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 AMIS_17000 61b083e54b9b9d39afae2a7eae045b25 1214 TIGRFAM TIGR02082 metH: methionine synthase 16 1179 0.0 T 14-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMIS_17000 61b083e54b9b9d39afae2a7eae045b25 1214 Pfam PF00809 Pterin binding enzyme 359 596 4.2E-49 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMIS_17000 61b083e54b9b9d39afae2a7eae045b25 1214 Gene3D G3DSA:1.10.288.10 937 1082 1.6E-115 T 14-10-2018 AMIS_17000 61b083e54b9b9d39afae2a7eae045b25 1214 Gene3D G3DSA:1.10.1240.10 645 732 1.1E-38 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMIS_17000 61b083e54b9b9d39afae2a7eae045b25 1214 SMART SM01018 652 735 3.7E-44 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMIS_6950 b1957225f30e278587deb0dec36eb8cc 596 Pfam PF00082 Subtilase family 147 392 1.5E-37 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AMIS_6950 b1957225f30e278587deb0dec36eb8cc 596 Gene3D G3DSA:3.40.50.200 89 410 1.1E-77 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AMIS_6950 b1957225f30e278587deb0dec36eb8cc 596 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 354 364 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site AMIS_6950 b1957225f30e278587deb0dec36eb8cc 596 Gene3D G3DSA:2.60.40.10 414 506 7.2E-7 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_6950 b1957225f30e278587deb0dec36eb8cc 596 Gene3D G3DSA:2.60.40.10 507 594 4.4E-15 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_6950 b1957225f30e278587deb0dec36eb8cc 596 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 187 197 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site AMIS_6950 b1957225f30e278587deb0dec36eb8cc 596 PRINTS PR00723 Subtilisin serine protease family (S8) signature 146 165 2.5E-11 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMIS_6950 b1957225f30e278587deb0dec36eb8cc 596 PRINTS PR00723 Subtilisin serine protease family (S8) signature 183 196 2.5E-11 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMIS_6950 b1957225f30e278587deb0dec36eb8cc 596 PRINTS PR00723 Subtilisin serine protease family (S8) signature 353 369 2.5E-11 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMIS_6950 b1957225f30e278587deb0dec36eb8cc 596 SUPERFAMILY SSF52743 131 409 1.83E-69 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AMIS_6950 b1957225f30e278587deb0dec36eb8cc 596 Pfam PF12245 Bacterial Ig-like domain (group 3) 577 589 0.28 T 14-10-2018 IPR022038 Bacterial Ig-like domain AMIS_6950 b1957225f30e278587deb0dec36eb8cc 596 Pfam PF12245 Bacterial Ig-like domain (group 3) 480 505 0.0057 T 14-10-2018 IPR022038 Bacterial Ig-like domain AMIS_21510 544a25c28c2cd0e2c5bdc5cbefbcbf81 450 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 68 80 - T 14-10-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-4655427|Reactome: R-HSA-5334118 AMIS_21510 544a25c28c2cd0e2c5bdc5cbefbcbf81 450 Pfam PF00145 C-5 cytosine-specific DNA methylase 13 171 1.5E-31 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AMIS_21510 544a25c28c2cd0e2c5bdc5cbefbcbf81 450 Gene3D G3DSA:3.40.50.150 2 182 5.3E-40 T 14-10-2018 AMIS_21510 544a25c28c2cd0e2c5bdc5cbefbcbf81 450 SUPERFAMILY SSF53335 10 429 1.25E-44 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_74550 4fba259f8ddb6e8024c09cd62baf77ab 153 Pfam PF13772 AIG2-like family 60 141 2.4E-19 T 14-10-2018 AMIS_74550 4fba259f8ddb6e8024c09cd62baf77ab 153 SUPERFAMILY SSF110857 2 121 7.98E-19 T 14-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily AMIS_74550 4fba259f8ddb6e8024c09cd62baf77ab 153 Gene3D G3DSA:3.10.490.10 2 152 1.9E-43 T 14-10-2018 AMIS_66110 a3784498c784976a904e24b39a63c25a 364 SUPERFAMILY SSF55469 156 355 6.39E-5 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AMIS_66110 a3784498c784976a904e24b39a63c25a 364 Gene3D G3DSA:3.40.109.10 144 363 8.5E-43 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AMIS_66110 a3784498c784976a904e24b39a63c25a 364 Gene3D G3DSA:3.40.109.10 2 99 3.3E-29 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AMIS_66110 a3784498c784976a904e24b39a63c25a 364 SUPERFAMILY SSF55469 11 79 2.49E-8 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AMIS_70360 d1afc207ec183c6b1cdb8cfcc66d7687 517 Gene3D G3DSA:1.10.260.30 330 450 2.1E-40 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 AMIS_70360 d1afc207ec183c6b1cdb8cfcc66d7687 517 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 2.3E-22 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AMIS_70360 d1afc207ec183c6b1cdb8cfcc66d7687 517 Pfam PF02978 Signal peptide binding domain 330 428 5.9E-31 T 14-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 AMIS_70360 d1afc207ec183c6b1cdb8cfcc66d7687 517 Gene3D G3DSA:1.20.120.140 5 307 2.1E-119 T 14-10-2018 AMIS_70360 d1afc207ec183c6b1cdb8cfcc66d7687 517 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 430 1.0E-175 T 14-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 AMIS_70360 d1afc207ec183c6b1cdb8cfcc66d7687 517 SMART SM00382 99 303 1.9E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_70360 d1afc207ec183c6b1cdb8cfcc66d7687 517 SMART SM00963 1 86 5.2E-36 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AMIS_70360 d1afc207ec183c6b1cdb8cfcc66d7687 517 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 271 284 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AMIS_70360 d1afc207ec183c6b1cdb8cfcc66d7687 517 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 482 33.68 T 14-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 AMIS_70360 d1afc207ec183c6b1cdb8cfcc66d7687 517 SUPERFAMILY SSF52540 42 357 8.85E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_70360 d1afc207ec183c6b1cdb8cfcc66d7687 517 SMART SM00962 100 298 2.2E-107 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AMIS_70360 d1afc207ec183c6b1cdb8cfcc66d7687 517 SUPERFAMILY SSF47446 330 432 3.6E-34 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 AMIS_70360 d1afc207ec183c6b1cdb8cfcc66d7687 517 Gene3D G3DSA:3.40.50.300 90 287 2.1E-119 T 14-10-2018 AMIS_70360 d1afc207ec183c6b1cdb8cfcc66d7687 517 Pfam PF00448 SRP54-type protein, GTPase domain 100 298 1.4E-69 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AMIS_70150 249837c7d9036a4f495e41832d53e516 311 SUPERFAMILY SSF47823 17 110 4.12E-11 T 14-10-2018 AMIS_70150 249837c7d9036a4f495e41832d53e516 311 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 19 100 3.1E-12 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AMIS_70150 249837c7d9036a4f495e41832d53e516 311 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 16 311 53.832 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD AMIS_70150 249837c7d9036a4f495e41832d53e516 311 Gene3D G3DSA:1.10.150.130 14 109 9.9E-13 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal AMIS_70150 249837c7d9036a4f495e41832d53e516 311 Gene3D G3DSA:1.10.443.10 122 305 3.8E-60 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AMIS_70150 249837c7d9036a4f495e41832d53e516 311 SUPERFAMILY SSF56349 119 309 1.85E-53 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMIS_70150 249837c7d9036a4f495e41832d53e516 311 Pfam PF00589 Phage integrase family 123 296 8.4E-46 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMIS_27220 0a62115d6bd9ecac632db5908fad940c 404 Pfam PF04055 Radical SAM superfamily 26 165 2.0E-23 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMIS_27220 0a62115d6bd9ecac632db5908fad940c 404 Pfam PF13186 Iron-sulfur cluster-binding domain 249 311 3.3E-5 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain AMIS_27220 0a62115d6bd9ecac632db5908fad940c 404 Gene3D G3DSA:3.20.20.70 6 297 7.3E-49 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_27220 0a62115d6bd9ecac632db5908fad940c 404 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 249 329 3.9E-15 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain AMIS_27220 0a62115d6bd9ecac632db5908fad940c 404 SMART SM00729 20 223 0.0064 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AMIS_27220 0a62115d6bd9ecac632db5908fad940c 404 TIGRFAM TIGR03962 mycofact_rSAM: mycofactocin radical SAM maturase 10 345 7.7E-197 T 14-10-2018 IPR023913 Mycofactocin, radical SAM peptide maturase AMIS_27220 0a62115d6bd9ecac632db5908fad940c 404 SUPERFAMILY SSF102114 19 321 2.22E-60 T 14-10-2018 AMIS_27220 0a62115d6bd9ecac632db5908fad940c 404 PIRSF PIRSF037420 6 239 5.3E-49 T 14-10-2018 IPR017200 Coenzyme PQQ synthesis protein E AMIS_27220 0a62115d6bd9ecac632db5908fad940c 404 PIRSF PIRSF037420 241 351 4.8E-12 T 14-10-2018 IPR017200 Coenzyme PQQ synthesis protein E AMIS_28310 269fd18363f42db42fbb8a1e7bd8c95f 537 SUPERFAMILY SSF51011 320 405 1.71E-15 T 14-10-2018 AMIS_28310 269fd18363f42db42fbb8a1e7bd8c95f 537 SUPERFAMILY SSF50370 410 535 1.76E-37 T 14-10-2018 IPR035992 Ricin B-like lectins AMIS_28310 269fd18363f42db42fbb8a1e7bd8c95f 537 Gene3D G3DSA:2.60.40.1180 321 405 6.8E-20 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta AMIS_28310 269fd18363f42db42fbb8a1e7bd8c95f 537 Gene3D G3DSA:3.20.20.70 27 319 1.3E-121 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_28310 269fd18363f42db42fbb8a1e7bd8c95f 537 ProSitePatterns PS00512 Alpha-galactosidase signature. 70 86 - T 14-10-2018 IPR000111 Glycoside hydrolase family 27/36, conserved site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AMIS_28310 269fd18363f42db42fbb8a1e7bd8c95f 537 SMART SM00458 414 537 4.6E-27 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_28310 269fd18363f42db42fbb8a1e7bd8c95f 537 Pfam PF00652 Ricin-type beta-trefoil lectin domain 414 534 2.0E-27 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_28310 269fd18363f42db42fbb8a1e7bd8c95f 537 PRINTS PR00740 Glycosyl hydrolase family 27 signature 253 272 9.6E-49 T 14-10-2018 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AMIS_28310 269fd18363f42db42fbb8a1e7bd8c95f 537 PRINTS PR00740 Glycosyl hydrolase family 27 signature 274 295 9.6E-49 T 14-10-2018 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AMIS_28310 269fd18363f42db42fbb8a1e7bd8c95f 537 PRINTS PR00740 Glycosyl hydrolase family 27 signature 147 164 9.6E-49 T 14-10-2018 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AMIS_28310 269fd18363f42db42fbb8a1e7bd8c95f 537 PRINTS PR00740 Glycosyl hydrolase family 27 signature 176 194 9.6E-49 T 14-10-2018 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AMIS_28310 269fd18363f42db42fbb8a1e7bd8c95f 537 PRINTS PR00740 Glycosyl hydrolase family 27 signature 29 48 9.6E-49 T 14-10-2018 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AMIS_28310 269fd18363f42db42fbb8a1e7bd8c95f 537 PRINTS PR00740 Glycosyl hydrolase family 27 signature 65 80 9.6E-49 T 14-10-2018 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AMIS_28310 269fd18363f42db42fbb8a1e7bd8c95f 537 SUPERFAMILY SSF51445 25 318 6.67E-90 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_28310 269fd18363f42db42fbb8a1e7bd8c95f 537 Pfam PF16499 Alpha galactosidase A 34 318 4.4E-77 T 14-10-2018 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AMIS_28310 269fd18363f42db42fbb8a1e7bd8c95f 537 Gene3D G3DSA:2.80.10.50 407 536 1.7E-39 T 14-10-2018 AMIS_23860 7bc027144958496dcc5ff6a9731b6dbf 500 Gene3D G3DSA:2.80.10.50 405 452 4.8E-12 T 14-10-2018 AMIS_23860 7bc027144958496dcc5ff6a9731b6dbf 500 Gene3D G3DSA:2.80.10.50 453 499 3.6E-9 T 14-10-2018 AMIS_23860 7bc027144958496dcc5ff6a9731b6dbf 500 SUPERFAMILY SSF50370 361 499 7.77E-37 T 14-10-2018 IPR035992 Ricin B-like lectins AMIS_23860 7bc027144958496dcc5ff6a9731b6dbf 500 Pfam PF04616 Glycosyl hydrolases family 43 39 334 2.4E-53 T 14-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 AMIS_23860 7bc027144958496dcc5ff6a9731b6dbf 500 Gene3D G3DSA:2.115.10.20 31 341 3.6E-80 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMIS_23860 7bc027144958496dcc5ff6a9731b6dbf 500 Pfam PF14200 Ricin-type beta-trefoil lectin domain-like 362 440 1.1E-21 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_23860 7bc027144958496dcc5ff6a9731b6dbf 500 Pfam PF14200 Ricin-type beta-trefoil lectin domain-like 446 498 2.3E-10 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_23860 7bc027144958496dcc5ff6a9731b6dbf 500 Gene3D G3DSA:2.80.10.50 349 404 1.3E-11 T 14-10-2018 AMIS_23860 7bc027144958496dcc5ff6a9731b6dbf 500 SUPERFAMILY SSF75005 38 335 9.14E-55 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMIS_32190 b5ca8da148a30a263b265b8e3489c2de 317 Pfam PF01261 Xylose isomerase-like TIM barrel 48 239 1.4E-18 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AMIS_32190 b5ca8da148a30a263b265b8e3489c2de 317 Pfam PF07582 AP endonuclease family 2 C terminus 264 313 1.5E-5 T 14-10-2018 IPR011418 AP endonuclease, family 2, C-terminal AMIS_32190 b5ca8da148a30a263b265b8e3489c2de 317 Gene3D G3DSA:3.20.20.150 25 309 3.0E-43 T 14-10-2018 AMIS_32190 b5ca8da148a30a263b265b8e3489c2de 317 SUPERFAMILY SSF51658 48 308 3.32E-32 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily AMIS_75990 dea2531be3d95ea5c82946be805975b5 426 SMART SM00387 294 406 2.1E-38 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_75990 dea2531be3d95ea5c82946be805975b5 426 PRINTS PR00344 Bacterial sensor protein C-terminal signature 366 384 2.7E-20 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_75990 dea2531be3d95ea5c82946be805975b5 426 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 403 2.7E-20 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_75990 dea2531be3d95ea5c82946be805975b5 426 PRINTS PR00344 Bacterial sensor protein C-terminal signature 331 345 2.7E-20 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_75990 dea2531be3d95ea5c82946be805975b5 426 PRINTS PR00344 Bacterial sensor protein C-terminal signature 349 359 2.7E-20 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_75990 dea2531be3d95ea5c82946be805975b5 426 SMART SM00388 172 249 1.6E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_75990 dea2531be3d95ea5c82946be805975b5 426 Gene3D G3DSA:3.30.565.10 255 407 2.3E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_75990 dea2531be3d95ea5c82946be805975b5 426 Pfam PF00512 His Kinase A (phospho-acceptor) domain 173 248 9.1E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_75990 dea2531be3d95ea5c82946be805975b5 426 Gene3D G3DSA:1.10.287.130 163 250 3.0E-19 T 14-10-2018 AMIS_75990 dea2531be3d95ea5c82946be805975b5 426 SUPERFAMILY SSF55874 239 411 2.88E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_75990 dea2531be3d95ea5c82946be805975b5 426 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 297 404 2.3E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_75990 dea2531be3d95ea5c82946be805975b5 426 SUPERFAMILY SSF47384 162 247 5.69E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_53080 d1025ab86b23de075006e14197cbb3f6 356 Pfam PF00535 Glycosyl transferase family 2 3 124 3.2E-13 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AMIS_53080 d1025ab86b23de075006e14197cbb3f6 356 Pfam PF04138 GtrA-like protein 223 334 6.3E-11 T 14-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 AMIS_53080 d1025ab86b23de075006e14197cbb3f6 356 Gene3D G3DSA:3.90.550.10 1 228 1.8E-26 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_53080 d1025ab86b23de075006e14197cbb3f6 356 SUPERFAMILY SSF53448 3 204 8.44E-22 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_79700 993bd6f502af5207ce45797124b7fae4 219 SUPERFAMILY SSF52172 4 138 1.39E-30 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_79700 993bd6f502af5207ce45797124b7fae4 219 Pfam PF00196 Bacterial regulatory proteins, luxR family 158 212 2.1E-21 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_79700 993bd6f502af5207ce45797124b7fae4 219 SUPERFAMILY SSF46894 155 218 1.29E-23 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_79700 993bd6f502af5207ce45797124b7fae4 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 188 5.3E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_79700 993bd6f502af5207ce45797124b7fae4 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 158 172 5.3E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_79700 993bd6f502af5207ce45797124b7fae4 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 188 200 5.3E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_79700 993bd6f502af5207ce45797124b7fae4 219 SMART SM00448 5 120 4.5E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_79700 993bd6f502af5207ce45797124b7fae4 219 Pfam PF00072 Response regulator receiver domain 7 119 2.9E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_79700 993bd6f502af5207ce45797124b7fae4 219 ProSitePatterns PS00622 LuxR-type HTH domain signature. 172 199 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_79700 993bd6f502af5207ce45797124b7fae4 219 Gene3D G3DSA:3.40.50.12740 5 218 2.2E-69 T 14-10-2018 AMIS_79700 993bd6f502af5207ce45797124b7fae4 219 SMART SM00421 155 212 7.5E-29 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_25690 3d858924d424851b9f014966da787732 340 SUPERFAMILY SSF89372 59 317 3.66E-5 T 14-10-2018 AMIS_12610 ceec9fa989c4be245fec1cd8f3fbd90f 573 Gene3D G3DSA:3.30.9.10 106 352 9.0E-128 T 14-10-2018 AMIS_12610 ceec9fa989c4be245fec1cd8f3fbd90f 573 SUPERFAMILY SSF51905 28 353 1.2E-38 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_12610 ceec9fa989c4be245fec1cd8f3fbd90f 573 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 380 390 - T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMIS_12610 ceec9fa989c4be245fec1cd8f3fbd90f 573 Gene3D G3DSA:1.10.8.870 419 560 4.9E-34 T 14-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMIS_12610 ceec9fa989c4be245fec1cd8f3fbd90f 573 Gene3D G3DSA:3.50.50.60 28 394 9.0E-128 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_12610 ceec9fa989c4be245fec1cd8f3fbd90f 573 Pfam PF01266 FAD dependent oxidoreductase 28 381 6.0E-53 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AMIS_12610 ceec9fa989c4be245fec1cd8f3fbd90f 573 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 409 532 2.5E-34 T 14-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMIS_12610 ceec9fa989c4be245fec1cd8f3fbd90f 573 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 345 351 3.7E-31 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMIS_12610 ceec9fa989c4be245fec1cd8f3fbd90f 573 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 56 68 3.7E-31 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMIS_12610 ceec9fa989c4be245fec1cd8f3fbd90f 573 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 375 387 3.7E-31 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMIS_12610 ceec9fa989c4be245fec1cd8f3fbd90f 573 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 27 39 3.7E-31 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMIS_12610 ceec9fa989c4be245fec1cd8f3fbd90f 573 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 40 50 3.7E-31 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMIS_12610 ceec9fa989c4be245fec1cd8f3fbd90f 573 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 102 114 3.7E-31 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMIS_13880 57ee87dc31dc20baba1ab7809766d633 611 SUPERFAMILY SSF52777 363 602 3.42E-77 T 14-10-2018 AMIS_13880 57ee87dc31dc20baba1ab7809766d633 611 Pfam PF02817 e3 binding domain 301 334 8.1E-15 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 AMIS_13880 57ee87dc31dc20baba1ab7809766d633 611 SUPERFAMILY SSF47005 296 338 1.83E-11 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 AMIS_13880 57ee87dc31dc20baba1ab7809766d633 611 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AMIS_13880 57ee87dc31dc20baba1ab7809766d633 611 Gene3D G3DSA:4.10.320.10 294 340 3.7E-15 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 AMIS_13880 57ee87dc31dc20baba1ab7809766d633 611 Gene3D G3DSA:2.40.50.100 3 100 1.1E-27 T 14-10-2018 AMIS_13880 57ee87dc31dc20baba1ab7809766d633 611 Gene3D G3DSA:2.40.50.100 127 231 1.0E-26 T 14-10-2018 AMIS_13880 57ee87dc31dc20baba1ab7809766d633 611 SUPERFAMILY SSF51230 2 95 3.27E-27 T 14-10-2018 IPR011053 Single hybrid motif AMIS_13880 57ee87dc31dc20baba1ab7809766d633 611 SUPERFAMILY SSF51230 134 226 5.89E-27 T 14-10-2018 IPR011053 Single hybrid motif AMIS_13880 57ee87dc31dc20baba1ab7809766d633 611 Gene3D G3DSA:3.30.559.10 355 607 1.0E-81 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AMIS_13880 57ee87dc31dc20baba1ab7809766d633 611 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 375 601 3.8E-73 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 AMIS_13880 57ee87dc31dc20baba1ab7809766d633 611 TIGRFAM TIGR02927 SucB_Actino: 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase 1 611 1.4E-241 T 14-10-2018 IPR014276 2-oxoglutarate dehydrogenase, E2 component KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 AMIS_13880 57ee87dc31dc20baba1ab7809766d633 611 Pfam PF00364 Biotin-requiring enzyme 135 207 5.7E-22 T 14-10-2018 IPR000089 Biotin/lipoyl attachment AMIS_13880 57ee87dc31dc20baba1ab7809766d633 611 Pfam PF00364 Biotin-requiring enzyme 5 76 1.1E-20 T 14-10-2018 IPR000089 Biotin/lipoyl attachment AMIS_13880 57ee87dc31dc20baba1ab7809766d633 611 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 158 187 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AMIS_48620 86666bb9b1da91a6fa234a3393791d5e 311 Pfam PF04962 KduI/IolB family 26 287 6.0E-86 T 14-10-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 AMIS_48620 86666bb9b1da91a6fa234a3393791d5e 311 Gene3D G3DSA:2.60.120.10 38 143 1.0E-83 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMIS_48620 86666bb9b1da91a6fa234a3393791d5e 311 TIGRFAM TIGR04378 myo_inos_iolB: 5-deoxy-glucuronate isomerase 37 288 3.5E-90 T 14-10-2018 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 AMIS_48620 86666bb9b1da91a6fa234a3393791d5e 311 SUPERFAMILY SSF51182 20 273 3.85E-57 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily AMIS_48620 86666bb9b1da91a6fa234a3393791d5e 311 PIRSF PIRSF036628 22 293 1.7E-86 T 14-10-2018 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 AMIS_48620 86666bb9b1da91a6fa234a3393791d5e 311 Gene3D G3DSA:2.60.120.10 144 287 1.0E-83 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMIS_57000 024eabbd28bc65de4ca298107cd6bb53 210 SUPERFAMILY SSF46689 12 76 2.84E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_57000 024eabbd28bc65de4ca298107cd6bb53 210 Gene3D G3DSA:1.10.357.10 77 210 1.7E-27 T 14-10-2018 AMIS_57000 024eabbd28bc65de4ca298107cd6bb53 210 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 79 209 7.9E-18 T 14-10-2018 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 AMIS_57000 024eabbd28bc65de4ca298107cd6bb53 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 67 7.6E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_57000 024eabbd28bc65de4ca298107cd6bb53 210 SUPERFAMILY SSF48498 80 210 4.94E-23 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_57000 024eabbd28bc65de4ca298107cd6bb53 210 Gene3D G3DSA:1.10.10.60 1 74 3.9E-27 T 14-10-2018 AMIS_14370 224717ce19f529f281b946f0c826bae9 167 SMART SM00347 48 151 4.0E-18 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_14370 224717ce19f529f281b946f0c826bae9 167 Pfam PF12802 MarR family 54 115 1.1E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_14370 224717ce19f529f281b946f0c826bae9 167 ProSitePatterns PS01117 MarR-type HTH domain signature. 90 124 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site AMIS_14370 224717ce19f529f281b946f0c826bae9 167 Gene3D G3DSA:1.10.10.10 1 165 9.7E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_14370 224717ce19f529f281b946f0c826bae9 167 PRINTS PR00598 Bacterial regulatory protein MarR family signature 75 91 7.9E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_14370 224717ce19f529f281b946f0c826bae9 167 PRINTS PR00598 Bacterial regulatory protein MarR family signature 111 127 7.9E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_14370 224717ce19f529f281b946f0c826bae9 167 PRINTS PR00598 Bacterial regulatory protein MarR family signature 141 161 7.9E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_14370 224717ce19f529f281b946f0c826bae9 167 PRINTS PR00598 Bacterial regulatory protein MarR family signature 92 107 7.9E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_14370 224717ce19f529f281b946f0c826bae9 167 SUPERFAMILY SSF46785 19 164 1.93E-27 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_1480 9c127a15d5a84b5fcb5272bdaf19e368 295 Gene3D G3DSA:1.10.600.10 1 264 1.4E-88 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily AMIS_1480 9c127a15d5a84b5fcb5272bdaf19e368 295 SUPERFAMILY SSF48576 8 286 1.15E-80 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily AMIS_1480 9c127a15d5a84b5fcb5272bdaf19e368 295 Pfam PF00494 Squalene/phytoene synthase 17 274 8.4E-72 T 14-10-2018 AMIS_1480 9c127a15d5a84b5fcb5272bdaf19e368 295 ProSitePatterns PS01044 Squalene and phytoene synthases signature 1. 130 145 - T 14-10-2018 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AMIS_1480 9c127a15d5a84b5fcb5272bdaf19e368 295 ProSitePatterns PS01045 Squalene and phytoene synthases signature 2. 161 186 - T 14-10-2018 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AMIS_64460 6c6a052f054cd36843fbb0faef34fd52 275 Gene3D G3DSA:3.40.50.150 45 244 2.3E-30 T 14-10-2018 AMIS_64460 6c6a052f054cd36843fbb0faef34fd52 275 SUPERFAMILY SSF53335 35 242 1.75E-30 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_64460 6c6a052f054cd36843fbb0faef34fd52 275 Pfam PF13649 Methyltransferase domain 60 150 2.3E-11 T 14-10-2018 AMIS_23560 3e68fb28d452431dd8ee0e93a1e69be3 1331 Pfam PF00931 NB-ARC domain 526 698 3.7E-10 T 14-10-2018 IPR002182 NB-ARC GO:0043531 Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-6798695|Reactome: R-HSA-6803207|Reactome: R-HSA-8953750 AMIS_23560 3e68fb28d452431dd8ee0e93a1e69be3 1331 Pfam PF13374 Tetratricopeptide repeat 1016 1053 5.9E-5 T 14-10-2018 AMIS_23560 3e68fb28d452431dd8ee0e93a1e69be3 1331 Pfam PF13374 Tetratricopeptide repeat 1184 1224 0.0042 T 14-10-2018 AMIS_23560 3e68fb28d452431dd8ee0e93a1e69be3 1331 SUPERFAMILY SSF52540 33 271 5.32E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_23560 3e68fb28d452431dd8ee0e93a1e69be3 1331 Gene3D G3DSA:1.25.40.10 892 1128 2.9E-33 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_23560 3e68fb28d452431dd8ee0e93a1e69be3 1331 Gene3D G3DSA:3.40.50.300 490 649 3.2E-26 T 14-10-2018 AMIS_23560 3e68fb28d452431dd8ee0e93a1e69be3 1331 Gene3D G3DSA:3.40.50.300 3 259 3.9E-29 T 14-10-2018 AMIS_23560 3e68fb28d452431dd8ee0e93a1e69be3 1331 PRINTS PR00364 Disease resistance protein signature 678 692 9.2E-5 T 14-10-2018 AMIS_23560 3e68fb28d452431dd8ee0e93a1e69be3 1331 PRINTS PR00364 Disease resistance protein signature 599 613 9.2E-5 T 14-10-2018 AMIS_23560 3e68fb28d452431dd8ee0e93a1e69be3 1331 PRINTS PR00364 Disease resistance protein signature 528 543 9.2E-5 T 14-10-2018 AMIS_23560 3e68fb28d452431dd8ee0e93a1e69be3 1331 Gene3D G3DSA:1.25.40.10 1129 1303 2.0E-19 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_23560 3e68fb28d452431dd8ee0e93a1e69be3 1331 SUPERFAMILY SSF48452 1013 1162 1.36E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_23560 3e68fb28d452431dd8ee0e93a1e69be3 1331 SUPERFAMILY SSF52540 491 740 9.69E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_23560 3e68fb28d452431dd8ee0e93a1e69be3 1331 Pfam PF13424 Tetratricopeptide repeat 937 997 1.1E-9 T 14-10-2018 AMIS_23560 3e68fb28d452431dd8ee0e93a1e69be3 1331 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 36 78 7.5E-7 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AMIS_23560 3e68fb28d452431dd8ee0e93a1e69be3 1331 SUPERFAMILY SSF48452 887 996 1.04E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_64560 d3455debd7e7662109607e86246e4e1b 497 SMART SM00387 365 478 1.8E-13 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_64560 d3455debd7e7662109607e86246e4e1b 497 SUPERFAMILY SSF47384 209 292 1.0E-18 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_64560 d3455debd7e7662109607e86246e4e1b 497 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 365 474 1.5E-11 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_64560 d3455debd7e7662109607e86246e4e1b 497 Pfam PF00512 His Kinase A (phospho-acceptor) domain 228 291 7.0E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_64560 d3455debd7e7662109607e86246e4e1b 497 SUPERFAMILY SSF158472 173 222 2.48E-7 T 14-10-2018 AMIS_64560 d3455debd7e7662109607e86246e4e1b 497 SMART SM00388 226 292 4.7E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_64560 d3455debd7e7662109607e86246e4e1b 497 Gene3D G3DSA:1.10.287.130 177 293 1.0E-25 T 14-10-2018 AMIS_64560 d3455debd7e7662109607e86246e4e1b 497 SUPERFAMILY SSF55874 282 474 5.76E-24 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_64560 d3455debd7e7662109607e86246e4e1b 497 PRINTS PR00344 Bacterial sensor protein C-terminal signature 438 456 4.3E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_64560 d3455debd7e7662109607e86246e4e1b 497 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 417 4.3E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_64560 d3455debd7e7662109607e86246e4e1b 497 PRINTS PR00344 Bacterial sensor protein C-terminal signature 462 475 4.3E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_64560 d3455debd7e7662109607e86246e4e1b 497 Gene3D G3DSA:3.30.565.10 346 477 1.4E-21 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_64560 d3455debd7e7662109607e86246e4e1b 497 Pfam PF00672 HAMP domain 173 221 2.1E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_64560 d3455debd7e7662109607e86246e4e1b 497 SMART SM00304 173 225 2.1E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_49670 b811e3ea51b8d56c37aea6fcf375d016 782 Pfam PF04389 Peptidase family M28 125 315 4.0E-37 T 14-10-2018 IPR007484 Peptidase M28 AMIS_49670 b811e3ea51b8d56c37aea6fcf375d016 782 Gene3D G3DSA:3.40.630.10 55 326 4.1E-58 T 14-10-2018 AMIS_49670 b811e3ea51b8d56c37aea6fcf375d016 782 SUPERFAMILY SSF53187 52 320 4.72E-49 T 14-10-2018 AMIS_68340 3261e16962ee54329b0d763d53e99989 398 Pfam PF02803 Thiolase, C-terminal domain 268 389 2.9E-36 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 AMIS_68340 3261e16962ee54329b0d763d53e99989 398 SUPERFAMILY SSF53901 269 389 1.24E-37 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_68340 3261e16962ee54329b0d763d53e99989 398 ProSitePatterns PS00737 Thiolases signature 2. 336 352 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 AMIS_68340 3261e16962ee54329b0d763d53e99989 398 Gene3D G3DSA:3.40.47.10 8 271 3.5E-118 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_68340 3261e16962ee54329b0d763d53e99989 398 PIRSF PIRSF000429 3 392 8.1E-119 T 14-10-2018 IPR002155 Thiolase GO:0016747 AMIS_68340 3261e16962ee54329b0d763d53e99989 398 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 11 389 5.1E-122 T 14-10-2018 IPR002155 Thiolase GO:0016747 AMIS_68340 3261e16962ee54329b0d763d53e99989 398 Gene3D G3DSA:3.40.47.10 135 383 3.5E-118 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_68340 3261e16962ee54329b0d763d53e99989 398 SUPERFAMILY SSF53901 7 265 5.26E-55 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_68340 3261e16962ee54329b0d763d53e99989 398 Pfam PF00108 Thiolase, N-terminal domain 8 257 8.4E-55 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 AMIS_3230 3f6974fccf2892e58cd9f09767186b21 785 TIGRFAM TIGR03817 DECH_helic: helicase/secretion neighborhood putative DEAH-box helicase 30 781 0.0 T 14-10-2018 IPR022307 DEAD/DEAH-box helicase, putative, actinobacteria AMIS_3230 3f6974fccf2892e58cd9f09767186b21 785 Gene3D G3DSA:3.40.50.300 50 251 1.2E-37 T 14-10-2018 AMIS_3230 3f6974fccf2892e58cd9f09767186b21 785 Pfam PF00270 DEAD/DEAH box helicase 68 233 5.0E-23 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMIS_3230 3f6974fccf2892e58cd9f09767186b21 785 Gene3D G3DSA:3.40.50.300 289 438 1.4E-19 T 14-10-2018 AMIS_3230 3f6974fccf2892e58cd9f09767186b21 785 SUPERFAMILY SSF52540 78 425 2.87E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_3230 3f6974fccf2892e58cd9f09767186b21 785 SMART SM00490 334 415 1.6E-15 T 14-10-2018 IPR001650 Helicase, C-terminal AMIS_3230 3f6974fccf2892e58cd9f09767186b21 785 Pfam PF00271 Helicase conserved C-terminal domain 304 415 4.8E-11 T 14-10-2018 IPR001650 Helicase, C-terminal AMIS_3230 3f6974fccf2892e58cd9f09767186b21 785 Pfam PF09369 Domain of unknown function (DUF1998) 675 754 5.2E-20 T 14-10-2018 IPR018973 DEAD/DEAH-box helicase, putative AMIS_3230 3f6974fccf2892e58cd9f09767186b21 785 SMART SM00487 62 264 3.4E-31 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMIS_23770 241324ff9991589e01ddb053987eaf17 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 14-10-2018 IPR019844 Cold-shock conserved site AMIS_23770 241324ff9991589e01ddb053987eaf17 67 SUPERFAMILY SSF50249 1 66 4.5E-25 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMIS_23770 241324ff9991589e01ddb053987eaf17 67 PRINTS PR00050 Cold shock protein signature 40 58 2.7E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMIS_23770 241324ff9991589e01ddb053987eaf17 67 PRINTS PR00050 Cold shock protein signature 25 34 2.7E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMIS_23770 241324ff9991589e01ddb053987eaf17 67 PRINTS PR00050 Cold shock protein signature 4 19 2.7E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMIS_23770 241324ff9991589e01ddb053987eaf17 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 6.5E-30 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMIS_23770 241324ff9991589e01ddb053987eaf17 67 Gene3D G3DSA:2.40.50.140 1 66 2.1E-29 T 14-10-2018 AMIS_23770 241324ff9991589e01ddb053987eaf17 67 SMART SM00357 3 67 2.5E-30 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 AMIS_23770 241324ff9991589e01ddb053987eaf17 67 PIRSF PIRSF002599 1 67 5.9E-25 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 AMIS_24780 ac10ec45b85a4762d0bcabe408710f69 257 Gene3D G3DSA:3.40.50.1820 3 239 5.2E-63 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_24780 ac10ec45b85a4762d0bcabe408710f69 257 Pfam PF07859 alpha/beta hydrolase fold 45 141 1.5E-18 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 AMIS_24780 ac10ec45b85a4762d0bcabe408710f69 257 SUPERFAMILY SSF53474 25 234 5.13E-49 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_58640 b3fd2373b94740a7d169166dadc9e36e 637 SUPERFAMILY SSF52129 407 588 5.34E-9 T 14-10-2018 IPR029030 Caspase-like domain superfamily AMIS_58640 b3fd2373b94740a7d169166dadc9e36e 637 Gene3D G3DSA:3.40.50.300 135 255 2.7E-16 T 14-10-2018 AMIS_58640 b3fd2373b94740a7d169166dadc9e36e 637 Gene3D G3DSA:3.40.50.1460 406 613 3.9E-14 T 14-10-2018 AMIS_58640 b3fd2373b94740a7d169166dadc9e36e 637 Gene3D G3DSA:1.10.1780.10 1 134 2.5E-30 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AMIS_58640 b3fd2373b94740a7d169166dadc9e36e 637 SUPERFAMILY SSF52540 145 356 2.16E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_58640 b3fd2373b94740a7d169166dadc9e36e 637 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 16 55 1.8E-7 T 14-10-2018 IPR004176 Clp, N-terminal AMIS_58640 b3fd2373b94740a7d169166dadc9e36e 637 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 93 131 8.8E-9 T 14-10-2018 IPR004176 Clp, N-terminal AMIS_58640 b3fd2373b94740a7d169166dadc9e36e 637 Gene3D G3DSA:1.10.8.60 284 381 2.5E-12 T 14-10-2018 AMIS_58640 b3fd2373b94740a7d169166dadc9e36e 637 SUPERFAMILY SSF81923 3 132 1.15E-16 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AMIS_58640 b3fd2373b94740a7d169166dadc9e36e 637 Pfam PF00656 Caspase domain 409 545 2.2E-5 T 14-10-2018 AMIS_22180 857e48ee76fbee6afa19fca6fdf58a46 387 SUPERFAMILY SSF82171 188 351 5.49E-7 T 14-10-2018 AMIS_48780 505bbd10a0c94483df8f8920c07d1157 903 SMART SM00421 843 900 3.6E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_48780 505bbd10a0c94483df8f8920c07d1157 903 Pfam PF00196 Bacterial regulatory proteins, luxR family 846 900 7.4E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_48780 505bbd10a0c94483df8f8920c07d1157 903 SUPERFAMILY SSF52540 11 218 1.05E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_48780 505bbd10a0c94483df8f8920c07d1157 903 Gene3D G3DSA:1.10.10.10 816 901 2.7E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_48780 505bbd10a0c94483df8f8920c07d1157 903 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 860 876 3.5E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_48780 505bbd10a0c94483df8f8920c07d1157 903 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 876 888 3.5E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_48780 505bbd10a0c94483df8f8920c07d1157 903 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 846 860 3.5E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_48780 505bbd10a0c94483df8f8920c07d1157 903 SUPERFAMILY SSF46894 843 900 2.35E-15 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_48780 505bbd10a0c94483df8f8920c07d1157 903 Pfam PF13191 AAA ATPase domain 9 150 3.0E-10 T 14-10-2018 AMIS_48780 505bbd10a0c94483df8f8920c07d1157 903 ProSitePatterns PS00622 LuxR-type HTH domain signature. 860 887 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_63330 9f114e8e14a6f8946a524a643ed8722f 853 Gene3D G3DSA:1.10.10.10 736 853 1.9E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_63330 9f114e8e14a6f8946a524a643ed8722f 853 SUPERFAMILY SSF52540 3 151 5.32E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_63330 9f114e8e14a6f8946a524a643ed8722f 853 SMART SM00421 788 845 1.0E-22 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_63330 9f114e8e14a6f8946a524a643ed8722f 853 SUPERFAMILY SSF46894 782 851 7.14E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_63330 9f114e8e14a6f8946a524a643ed8722f 853 Pfam PF13191 AAA ATPase domain 3 141 2.3E-21 T 14-10-2018 AMIS_63330 9f114e8e14a6f8946a524a643ed8722f 853 Pfam PF00196 Bacterial regulatory proteins, luxR family 791 844 6.8E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_63330 9f114e8e14a6f8946a524a643ed8722f 853 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 805 821 2.4E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_63330 9f114e8e14a6f8946a524a643ed8722f 853 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 791 805 2.4E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_63330 9f114e8e14a6f8946a524a643ed8722f 853 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 821 833 2.4E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_63330 9f114e8e14a6f8946a524a643ed8722f 853 Gene3D G3DSA:3.40.50.300 1 150 2.1E-6 T 14-10-2018 AMIS_63330 9f114e8e14a6f8946a524a643ed8722f 853 Gene3D G3DSA:1.25.40.10 395 627 9.1E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_63330 9f114e8e14a6f8946a524a643ed8722f 853 SUPERFAMILY SSF48452 400 596 1.74E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_63330 9f114e8e14a6f8946a524a643ed8722f 853 ProSitePatterns PS00622 LuxR-type HTH domain signature. 805 832 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_69570 f555476ac7cbb69738387ff8b26f8a25 293 Gene3D G3DSA:2.30.130.10 228 290 2.6E-13 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 AMIS_69570 f555476ac7cbb69738387ff8b26f8a25 293 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 3 290 17.406 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMIS_69570 f555476ac7cbb69738387ff8b26f8a25 293 SUPERFAMILY SSF55120 3 220 9.12E-72 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMIS_69570 f555476ac7cbb69738387ff8b26f8a25 293 Pfam PF09142 tRNA Pseudouridine synthase II, C terminal 236 290 2.3E-15 T 14-10-2018 IPR015225 tRNA pseudouridine synthase II, TruB, subfamily 2, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMIS_69570 f555476ac7cbb69738387ff8b26f8a25 293 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 178 218 3.2E-12 T 14-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 AMIS_69570 f555476ac7cbb69738387ff8b26f8a25 293 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 4 216 6.8E-68 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMIS_69570 f555476ac7cbb69738387ff8b26f8a25 293 Gene3D G3DSA:3.30.2350.10 5 224 2.9E-88 T 14-10-2018 AMIS_69570 f555476ac7cbb69738387ff8b26f8a25 293 SUPERFAMILY SSF88697 236 292 9.94E-9 T 14-10-2018 IPR015947 PUA-like superfamily AMIS_69570 f555476ac7cbb69738387ff8b26f8a25 293 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 25 177 7.3E-50 T 14-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 AMIS_14740 42edcfb7cd0a9158acf61d00d6c9a3b5 661 Gene3D G3DSA:3.30.200.20 6 97 8.6E-31 T 14-10-2018 AMIS_14740 42edcfb7cd0a9158acf61d00d6c9a3b5 661 Gene3D G3DSA:3.30.10.20 602 660 2.6E-7 T 14-10-2018 AMIS_14740 42edcfb7cd0a9158acf61d00d6c9a3b5 661 Pfam PF00069 Protein kinase domain 21 275 2.3E-48 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMIS_14740 42edcfb7cd0a9158acf61d00d6c9a3b5 661 Pfam PF03793 PASTA domain 605 658 2.2E-6 T 14-10-2018 IPR005543 PASTA domain AMIS_14740 42edcfb7cd0a9158acf61d00d6c9a3b5 661 Pfam PF03793 PASTA domain 539 599 1.3E-15 T 14-10-2018 IPR005543 PASTA domain AMIS_14740 42edcfb7cd0a9158acf61d00d6c9a3b5 661 Pfam PF03793 PASTA domain 473 533 7.9E-12 T 14-10-2018 IPR005543 PASTA domain AMIS_14740 42edcfb7cd0a9158acf61d00d6c9a3b5 661 Pfam PF03793 PASTA domain 406 465 9.7E-9 T 14-10-2018 IPR005543 PASTA domain AMIS_14740 42edcfb7cd0a9158acf61d00d6c9a3b5 661 SUPERFAMILY SSF56112 15 285 7.82E-72 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMIS_14740 42edcfb7cd0a9158acf61d00d6c9a3b5 661 Gene3D G3DSA:1.10.510.10 99 295 5.4E-48 T 14-10-2018 AMIS_14740 42edcfb7cd0a9158acf61d00d6c9a3b5 661 SMART SM00220 18 287 5.9E-61 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMIS_14740 42edcfb7cd0a9158acf61d00d6c9a3b5 661 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 137 149 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 AMIS_14740 42edcfb7cd0a9158acf61d00d6c9a3b5 661 Gene3D G3DSA:3.30.10.20 403 469 2.4E-12 T 14-10-2018 AMIS_14740 42edcfb7cd0a9158acf61d00d6c9a3b5 661 Gene3D G3DSA:3.30.10.20 537 601 1.3E-15 T 14-10-2018 AMIS_14740 42edcfb7cd0a9158acf61d00d6c9a3b5 661 Gene3D G3DSA:3.30.10.20 471 536 2.9E-16 T 14-10-2018 AMIS_14740 42edcfb7cd0a9158acf61d00d6c9a3b5 661 SMART SM00740 535 600 2.2E-15 T 14-10-2018 IPR005543 PASTA domain AMIS_14740 42edcfb7cd0a9158acf61d00d6c9a3b5 661 SMART SM00740 399 466 7.5E-5 T 14-10-2018 IPR005543 PASTA domain AMIS_14740 42edcfb7cd0a9158acf61d00d6c9a3b5 661 SMART SM00740 601 660 0.024 T 14-10-2018 IPR005543 PASTA domain AMIS_14740 42edcfb7cd0a9158acf61d00d6c9a3b5 661 SMART SM00740 467 534 9.1E-14 T 14-10-2018 IPR005543 PASTA domain AMIS_14740 42edcfb7cd0a9158acf61d00d6c9a3b5 661 SUPERFAMILY SSF54184 539 596 2.35E-5 T 14-10-2018 AMIS_12190 f587d9aafbbc81d16b6380686b2e1a0b 162 Gene3D G3DSA:3.30.450.30 7 124 1.6E-27 T 14-10-2018 AMIS_12190 f587d9aafbbc81d16b6380686b2e1a0b 162 SMART SM00960 8 96 3.9E-16 T 14-10-2018 IPR004942 Roadblock/LAMTOR2 domain AMIS_12190 f587d9aafbbc81d16b6380686b2e1a0b 162 Pfam PF03259 Roadblock/LC7 domain 9 96 3.2E-15 T 14-10-2018 IPR004942 Roadblock/LAMTOR2 domain AMIS_12190 f587d9aafbbc81d16b6380686b2e1a0b 162 SUPERFAMILY SSF103196 10 119 2.96E-23 T 14-10-2018 AMIS_58350 ef7138dabb24d679fec29fc261fd2f8f 542 Pfam PF07690 Major Facilitator Superfamily 42 433 1.0E-55 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_58350 ef7138dabb24d679fec29fc261fd2f8f 542 PRINTS PR01036 Tetracycline resistance protein TetB signature 226 244 7.8E-7 T 14-10-2018 AMIS_58350 ef7138dabb24d679fec29fc261fd2f8f 542 PRINTS PR01036 Tetracycline resistance protein TetB signature 40 64 7.8E-7 T 14-10-2018 AMIS_58350 ef7138dabb24d679fec29fc261fd2f8f 542 PRINTS PR01036 Tetracycline resistance protein TetB signature 131 151 7.8E-7 T 14-10-2018 AMIS_58350 ef7138dabb24d679fec29fc261fd2f8f 542 PRINTS PR01036 Tetracycline resistance protein TetB signature 188 212 7.8E-7 T 14-10-2018 AMIS_58350 ef7138dabb24d679fec29fc261fd2f8f 542 Gene3D G3DSA:1.20.1720.10 39 245 2.7E-50 T 14-10-2018 AMIS_58350 ef7138dabb24d679fec29fc261fd2f8f 542 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 37 520 9.4E-133 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 AMIS_58350 ef7138dabb24d679fec29fc261fd2f8f 542 SUPERFAMILY SSF103473 32 525 3.53E-76 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_43200 1fd278880d3e9d0ae30587543a87245f 651 Gene3D G3DSA:3.40.50.300 2 251 1.7E-73 T 14-10-2018 AMIS_43200 1fd278880d3e9d0ae30587543a87245f 651 SUPERFAMILY SSF54980 546 628 3.29E-10 T 14-10-2018 IPR035647 EF-G domain III/V-like AMIS_43200 1fd278880d3e9d0ae30587543a87245f 651 Gene3D G3DSA:2.40.30.10 252 340 1.1E-9 T 14-10-2018 AMIS_43200 1fd278880d3e9d0ae30587543a87245f 651 SUPERFAMILY SSF52540 4 243 2.02E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_43200 1fd278880d3e9d0ae30587543a87245f 651 SUPERFAMILY SSF50447 216 325 3.24E-10 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AMIS_43200 1fd278880d3e9d0ae30587543a87245f 651 SUPERFAMILY SSF54211 434 513 2.16E-10 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMIS_43200 1fd278880d3e9d0ae30587543a87245f 651 Pfam PF14492 Elongation Factor G, domain II 340 412 3.3E-8 T 14-10-2018 AMIS_43200 1fd278880d3e9d0ae30587543a87245f 651 Gene3D G3DSA:3.30.70.870 341 414 1.7E-10 T 14-10-2018 AMIS_43200 1fd278880d3e9d0ae30587543a87245f 651 Pfam PF00009 Elongation factor Tu GTP binding domain 4 243 9.2E-52 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_43200 1fd278880d3e9d0ae30587543a87245f 651 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 454 468 3.3E-23 T 14-10-2018 AMIS_43200 1fd278880d3e9d0ae30587543a87245f 651 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 109 132 3.3E-23 T 14-10-2018 AMIS_43200 1fd278880d3e9d0ae30587543a87245f 651 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 217 239 3.3E-23 T 14-10-2018 AMIS_43200 1fd278880d3e9d0ae30587543a87245f 651 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 269 295 3.3E-23 T 14-10-2018 AMIS_43200 1fd278880d3e9d0ae30587543a87245f 651 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 469 491 3.3E-23 T 14-10-2018 AMIS_43200 1fd278880d3e9d0ae30587543a87245f 651 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 158 1.2E-30 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AMIS_43200 1fd278880d3e9d0ae30587543a87245f 651 Gene3D G3DSA:3.30.230.10 422 541 2.6E-9 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMIS_43200 1fd278880d3e9d0ae30587543a87245f 651 Pfam PF03764 Elongation factor G, domain IV 435 542 9.6E-10 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AMIS_43200 1fd278880d3e9d0ae30587543a87245f 651 PRINTS PR00315 GTP-binding elongation factor signature 5 18 5.0E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_43200 1fd278880d3e9d0ae30587543a87245f 651 PRINTS PR00315 GTP-binding elongation factor signature 51 59 5.0E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_43200 1fd278880d3e9d0ae30587543a87245f 651 PRINTS PR00315 GTP-binding elongation factor signature 71 81 5.0E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_43200 1fd278880d3e9d0ae30587543a87245f 651 PRINTS PR00315 GTP-binding elongation factor signature 87 98 5.0E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_43200 1fd278880d3e9d0ae30587543a87245f 651 PRINTS PR00315 GTP-binding elongation factor signature 123 132 5.0E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_43200 1fd278880d3e9d0ae30587543a87245f 651 Gene3D G3DSA:3.30.70.240 542 628 2.7E-8 T 14-10-2018 AMIS_43200 1fd278880d3e9d0ae30587543a87245f 651 SMART SM00889 416 543 1.1E-5 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AMIS_43200 1fd278880d3e9d0ae30587543a87245f 651 SUPERFAMILY SSF54980 340 413 3.06E-12 T 14-10-2018 IPR035647 EF-G domain III/V-like AMIS_43200 1fd278880d3e9d0ae30587543a87245f 651 Pfam PF00679 Elongation factor G C-terminus 546 628 2.3E-9 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like AMIS_43200 1fd278880d3e9d0ae30587543a87245f 651 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site AMIS_7940 cf3caa969ba28daecdb10df6a89ef804 653 Pfam PF13181 Tetratricopeptide repeat 302 334 0.05 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_7940 cf3caa969ba28daecdb10df6a89ef804 653 SUPERFAMILY SSF48452 279 576 1.8E-20 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_7940 cf3caa969ba28daecdb10df6a89ef804 653 Gene3D G3DSA:1.25.40.10 418 592 5.9E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_7940 cf3caa969ba28daecdb10df6a89ef804 653 Gene3D G3DSA:1.25.40.10 275 373 1.7E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_7940 cf3caa969ba28daecdb10df6a89ef804 653 SMART SM00028 476 509 85.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_7940 cf3caa969ba28daecdb10df6a89ef804 653 SMART SM00028 301 334 0.2 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_7940 cf3caa969ba28daecdb10df6a89ef804 653 SMART SM00028 441 475 440.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_2930 a5a2afeaf80ce9e17be0244c70d3f66b 99 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 6 93 1.8E-22 T 14-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like AMIS_2930 a5a2afeaf80ce9e17be0244c70d3f66b 99 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 1 99 20.003 T 14-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 AMIS_11220 922bfcd4936a86866ead83b0e9e5add7 449 TIGRFAM TIGR00115 tig: trigger factor 12 416 2.5E-115 T 14-10-2018 IPR005215 Trigger factor GO:0015031 AMIS_11220 922bfcd4936a86866ead83b0e9e5add7 449 SUPERFAMILY SSF54534 133 244 9.04E-20 T 14-10-2018 AMIS_11220 922bfcd4936a86866ead83b0e9e5add7 449 Gene3D G3DSA:3.30.70.1050 1 116 5.8E-31 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 AMIS_11220 922bfcd4936a86866ead83b0e9e5add7 449 Gene3D G3DSA:1.10.3120.10 117 422 1.6E-64 T 14-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 AMIS_11220 922bfcd4936a86866ead83b0e9e5add7 449 Hamap MF_00303 Trigger factor [tig]. 1 424 18.939 T 14-10-2018 IPR005215 Trigger factor GO:0015031 AMIS_11220 922bfcd4936a86866ead83b0e9e5add7 449 PIRSF PIRSF003095 1 443 2.0E-111 T 14-10-2018 IPR005215 Trigger factor GO:0015031 AMIS_11220 922bfcd4936a86866ead83b0e9e5add7 449 SUPERFAMILY SSF102735 2 130 4.19E-35 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 AMIS_11220 922bfcd4936a86866ead83b0e9e5add7 449 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 158 215 5.5E-7 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AMIS_11220 922bfcd4936a86866ead83b0e9e5add7 449 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 258 418 4.2E-31 T 14-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 AMIS_11220 922bfcd4936a86866ead83b0e9e5add7 449 Pfam PF05697 Bacterial trigger factor protein (TF) 2 144 1.7E-38 T 14-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 AMIS_11220 922bfcd4936a86866ead83b0e9e5add7 449 Gene3D G3DSA:3.10.50.40 151 243 1.6E-64 T 14-10-2018 AMIS_11220 922bfcd4936a86866ead83b0e9e5add7 449 SUPERFAMILY SSF109998 245 430 3.14E-35 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily AMIS_56510 36cd748aa49c945c18a7f5c1c669a3e2 152 SUPERFAMILY SSF54637 10 148 1.05E-37 T 14-10-2018 IPR029069 HotDog domain superfamily AMIS_56510 36cd748aa49c945c18a7f5c1c669a3e2 152 Pfam PF01575 MaoC like domain 14 120 5.6E-25 T 14-10-2018 IPR002539 MaoC-like dehydratase domain AMIS_56510 36cd748aa49c945c18a7f5c1c669a3e2 152 Gene3D G3DSA:3.10.129.10 3 152 1.5E-49 T 14-10-2018 AMIS_22060 29e6402fe8a2ba78ed41c0a5f74abe6b 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 6.3E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_22060 29e6402fe8a2ba78ed41c0a5f74abe6b 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 6.3E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_22060 29e6402fe8a2ba78ed41c0a5f74abe6b 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 6.3E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_22060 29e6402fe8a2ba78ed41c0a5f74abe6b 217 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 208 8.0E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_22060 29e6402fe8a2ba78ed41c0a5f74abe6b 217 SMART SM00421 151 208 9.8E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_22060 29e6402fe8a2ba78ed41c0a5f74abe6b 217 Pfam PF00072 Response regulator receiver domain 4 114 8.0E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_22060 29e6402fe8a2ba78ed41c0a5f74abe6b 217 SUPERFAMILY SSF52172 2 133 3.84E-32 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_22060 29e6402fe8a2ba78ed41c0a5f74abe6b 217 Gene3D G3DSA:3.40.50.12740 2 214 8.6E-64 T 14-10-2018 AMIS_22060 29e6402fe8a2ba78ed41c0a5f74abe6b 217 SMART SM00448 2 114 7.9E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_22060 29e6402fe8a2ba78ed41c0a5f74abe6b 217 SUPERFAMILY SSF46894 136 214 1.02E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_7770 25596dcd6fd8e332230eb5bd183ebd93 340 SUPERFAMILY SSF52266 70 265 9.77E-28 T 14-10-2018 AMIS_7770 25596dcd6fd8e332230eb5bd183ebd93 340 Gene3D G3DSA:3.40.50.1110 64 262 3.3E-20 T 14-10-2018 IPR036514 SGNH hydrolase superfamily AMIS_7770 25596dcd6fd8e332230eb5bd183ebd93 340 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 76 252 1.9E-21 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain AMIS_51940 67b799accdfb64cfe2d84a1451ab6a65 143 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 9 87 2.1E-13 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AMIS_51940 67b799accdfb64cfe2d84a1451ab6a65 143 SUPERFAMILY SSF50475 9 139 2.9E-34 T 14-10-2018 AMIS_51940 67b799accdfb64cfe2d84a1451ab6a65 143 TIGRFAM TIGR03618 Rv1155_F420: PPOX class probable F420-dependent enzyme 9 139 4.7E-43 T 14-10-2018 IPR019920 F420-binding domain, putative AMIS_51940 67b799accdfb64cfe2d84a1451ab6a65 143 Gene3D G3DSA:2.30.110.10 7 142 4.7E-43 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AMIS_16300 92ab2ef9373e0f47ac03c00572c7692e 409 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 7 409 1.8E-172 T 14-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 AMIS_16300 92ab2ef9373e0f47ac03c00572c7692e 409 Gene3D G3DSA:3.40.640.10 36 297 2.0E-167 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_16300 92ab2ef9373e0f47ac03c00572c7692e 409 Gene3D G3DSA:3.90.1150.10 8 400 2.0E-167 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMIS_16300 92ab2ef9373e0f47ac03c00572c7692e 409 SUPERFAMILY SSF53383 3 405 4.81E-128 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_16300 92ab2ef9373e0f47ac03c00572c7692e 409 Pfam PF00266 Aminotransferase class-V 25 397 6.0E-142 T 14-10-2018 IPR000192 Aminotransferase class V domain AMIS_51390 989269781cc240a3ec35174b1c1bfe9d 548 SMART SM00304 233 285 4.9E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_51390 989269781cc240a3ec35174b1c1bfe9d 548 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 30 55 7.4E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_51390 989269781cc240a3ec35174b1c1bfe9d 548 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 420 449 7.4E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_51390 989269781cc240a3ec35174b1c1bfe9d 548 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 391 418 7.4E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_51390 989269781cc240a3ec35174b1c1bfe9d 548 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 468 497 7.4E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_51390 989269781cc240a3ec35174b1c1bfe9d 548 Pfam PF12729 Four helix bundle sensory module for signal transduction 30 204 5.2E-19 T 14-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain AMIS_51390 989269781cc240a3ec35174b1c1bfe9d 548 Gene3D G3DSA:1.10.287.950 233 547 9.1E-63 T 14-10-2018 AMIS_51390 989269781cc240a3ec35174b1c1bfe9d 548 Pfam PF00672 HAMP domain 234 271 6.6E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_51390 989269781cc240a3ec35174b1c1bfe9d 548 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 354 517 2.8E-34 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_51390 989269781cc240a3ec35174b1c1bfe9d 548 SMART SM00283 293 547 7.0E-53 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_51390 989269781cc240a3ec35174b1c1bfe9d 548 SUPERFAMILY SSF58104 253 546 4.32E-61 T 14-10-2018 AMIS_21780 ba212607fb5a2e17fb1d0dfee7b68ef6 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 2.6E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_21780 ba212607fb5a2e17fb1d0dfee7b68ef6 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 2.6E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_21780 ba212607fb5a2e17fb1d0dfee7b68ef6 195 Gene3D G3DSA:1.10.357.10 50 194 1.4E-28 T 14-10-2018 AMIS_21780 ba212607fb5a2e17fb1d0dfee7b68ef6 195 Gene3D G3DSA:1.10.10.60 2 49 6.5E-21 T 14-10-2018 AMIS_21780 ba212607fb5a2e17fb1d0dfee7b68ef6 195 SUPERFAMILY SSF46689 3 81 1.7E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_21780 ba212607fb5a2e17fb1d0dfee7b68ef6 195 SUPERFAMILY SSF48498 79 194 2.23E-15 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_21780 ba212607fb5a2e17fb1d0dfee7b68ef6 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 55 1.0E-15 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_36040 25c57189e3134c224f8f5a479a18839a 869 SUPERFAMILY SSF56059 3 343 4.0E-81 T 14-10-2018 AMIS_36040 25c57189e3134c224f8f5a479a18839a 869 Gene3D G3DSA:3.50.30.10 767 868 2.5E-29 T 14-10-2018 AMIS_36040 25c57189e3134c224f8f5a479a18839a 869 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 22 320 2.4E-75 T 14-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 AMIS_36040 25c57189e3134c224f8f5a479a18839a 869 SUPERFAMILY SSF52009 763 866 6.8E-26 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 AMIS_36040 25c57189e3134c224f8f5a479a18839a 869 Pfam PF00391 PEP-utilising enzyme, mobile domain 793 864 3.0E-20 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AMIS_36040 25c57189e3134c224f8f5a479a18839a 869 Gene3D G3DSA:3.30.1490.20 1 189 4.1E-55 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AMIS_36040 25c57189e3134c224f8f5a479a18839a 869 Gene3D G3DSA:3.30.470.20 190 319 5.2E-43 T 14-10-2018 AMIS_31060 54197b49a16d34de42576456726c255a 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 3.2E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_31060 54197b49a16d34de42576456726c255a 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 3.2E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_31060 54197b49a16d34de42576456726c255a 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 66 1.4E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_31060 54197b49a16d34de42576456726c255a 202 Gene3D G3DSA:1.10.10.60 8 60 1.4E-16 T 14-10-2018 AMIS_31060 54197b49a16d34de42576456726c255a 202 SUPERFAMILY SSF46689 12 78 6.31E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_31060 54197b49a16d34de42576456726c255a 202 Gene3D G3DSA:1.10.357.10 61 195 1.2E-24 T 14-10-2018 AMIS_31060 54197b49a16d34de42576456726c255a 202 SUPERFAMILY SSF48498 80 197 6.99E-18 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_31060 54197b49a16d34de42576456726c255a 202 Pfam PF16859 Bacterial transcriptional repressor C-terminal 80 189 3.6E-19 T 14-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AMIS_22680 92b37e4d230e446e05701ac1d0df2f14 104 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 3 100 1.4E-20 T 14-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 AMIS_22680 92b37e4d230e446e05701ac1d0df2f14 104 SUPERFAMILY SSF52091 4 100 8.24E-24 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_22680 92b37e4d230e446e05701ac1d0df2f14 104 Gene3D G3DSA:3.30.750.24 6 103 1.4E-26 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_22680 92b37e4d230e446e05701ac1d0df2f14 104 Pfam PF13466 STAS domain 20 97 1.2E-16 T 14-10-2018 IPR002645 STAS domain AMIS_30970 bcfdd8ece92e7344dec99ec73c3ddbc7 262 Pfam PF13489 Methyltransferase domain 33 159 5.0E-13 T 14-10-2018 AMIS_30970 bcfdd8ece92e7344dec99ec73c3ddbc7 262 SUPERFAMILY SSF53335 18 167 1.11E-22 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_30970 bcfdd8ece92e7344dec99ec73c3ddbc7 262 Gene3D G3DSA:3.40.50.150 29 245 7.6E-23 T 14-10-2018 AMIS_14610 3800a6006a0c6a3c96b13883a7ed80b5 326 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.4E-5 T 14-10-2018 AMIS_14610 3800a6006a0c6a3c96b13883a7ed80b5 326 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 310 324 1.4E-5 T 14-10-2018 AMIS_14610 3800a6006a0c6a3c96b13883a7ed80b5 326 Pfam PF01266 FAD dependent oxidoreductase 6 312 1.1E-32 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AMIS_14610 3800a6006a0c6a3c96b13883a7ed80b5 326 Gene3D G3DSA:3.40.50.720 7 314 1.2E-78 T 14-10-2018 AMIS_14610 3800a6006a0c6a3c96b13883a7ed80b5 326 PIRSF PIRSF000189 3 326 9.9E-68 T 14-10-2018 IPR023209 D-amino-acid oxidase GO:0003884|GO:0046416|GO:0071949 Reactome: R-HSA-389661|Reactome: R-HSA-9033241 AMIS_14610 3800a6006a0c6a3c96b13883a7ed80b5 326 SUPERFAMILY SSF51971 3 312 3.53E-26 T 14-10-2018 AMIS_14610 3800a6006a0c6a3c96b13883a7ed80b5 326 Gene3D G3DSA:3.30.9.10 83 276 1.2E-78 T 14-10-2018 AMIS_14610 3800a6006a0c6a3c96b13883a7ed80b5 326 SUPERFAMILY SSF54373 186 277 7.06E-16 T 14-10-2018 AMIS_29650 d7e5d9035ca815a6da102237feabd654 427 SMART SM00922 192 288 4.0E-27 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AMIS_29650 d7e5d9035ca815a6da102237feabd654 427 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 33 129 1.0E-8 T 14-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AMIS_29650 d7e5d9035ca815a6da102237feabd654 427 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 238 269 - T 14-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 AMIS_29650 d7e5d9035ca815a6da102237feabd654 427 Pfam PF13378 Enolase C-terminal domain-like 195 412 4.8E-61 T 14-10-2018 IPR029065 Enolase C-terminal domain-like AMIS_29650 d7e5d9035ca815a6da102237feabd654 427 SUPERFAMILY SSF51604 177 424 1.83E-69 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AMIS_29650 d7e5d9035ca815a6da102237feabd654 427 Gene3D G3DSA:3.20.20.120 125 427 4.7E-110 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AMIS_29650 d7e5d9035ca815a6da102237feabd654 427 Gene3D G3DSA:3.30.390.10 1 124 2.3E-49 T 14-10-2018 IPR029017 Enolase-like, N-terminal AMIS_29650 d7e5d9035ca815a6da102237feabd654 427 SUPERFAMILY SSF54826 1 132 3.87E-38 T 14-10-2018 AMIS_57480 98d471f67d7aedc8e43dbdc3443ff28b 495 Gene3D G3DSA:3.30.300.310 399 495 1.3E-32 T 14-10-2018 AMIS_57480 98d471f67d7aedc8e43dbdc3443ff28b 495 Pfam PF13193 AMP-binding enzyme C-terminal domain 413 485 2.2E-20 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AMIS_57480 98d471f67d7aedc8e43dbdc3443ff28b 495 SUPERFAMILY SSF56801 5 493 4.06E-143 T 14-10-2018 AMIS_57480 98d471f67d7aedc8e43dbdc3443ff28b 495 Gene3D G3DSA:3.40.50.12780 7 398 3.5E-103 T 14-10-2018 AMIS_57480 98d471f67d7aedc8e43dbdc3443ff28b 495 ProSitePatterns PS00455 Putative AMP-binding domain signature. 158 169 - T 14-10-2018 IPR020845 AMP-binding, conserved site AMIS_57480 98d471f67d7aedc8e43dbdc3443ff28b 495 Pfam PF00501 AMP-binding enzyme 18 403 2.5E-92 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMIS_69920 7c949fde9711840ed6769c5c468d0d94 659 Gene3D G3DSA:3.30.565.10 357 525 2.9E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_69920 7c949fde9711840ed6769c5c468d0d94 659 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 397 519 1.2E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_69920 7c949fde9711840ed6769c5c468d0d94 659 Gene3D G3DSA:1.10.287.130 272 353 4.6E-18 T 14-10-2018 AMIS_69920 7c949fde9711840ed6769c5c468d0d94 659 SMART SM00388 280 355 0.0012 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_69920 7c949fde9711840ed6769c5c468d0d94 659 SUPERFAMILY SSF55785 18 128 8.98E-22 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_69920 7c949fde9711840ed6769c5c468d0d94 659 PRINTS PR00344 Bacterial sensor protein C-terminal signature 504 517 5.9E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_69920 7c949fde9711840ed6769c5c468d0d94 659 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 463 5.9E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_69920 7c949fde9711840ed6769c5c468d0d94 659 PRINTS PR00344 Bacterial sensor protein C-terminal signature 480 498 5.9E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_69920 7c949fde9711840ed6769c5c468d0d94 659 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 477 5.9E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_69920 7c949fde9711840ed6769c5c468d0d94 659 Gene3D G3DSA:3.40.50.2300 539 659 4.3E-26 T 14-10-2018 AMIS_69920 7c949fde9711840ed6769c5c468d0d94 659 SMART SM00448 540 653 1.8E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_69920 7c949fde9711840ed6769c5c468d0d94 659 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 12 127 2.6E-17 T 14-10-2018 IPR000014 PAS domain AMIS_69920 7c949fde9711840ed6769c5c468d0d94 659 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 123 248 2.2E-23 T 14-10-2018 IPR000014 PAS domain AMIS_69920 7c949fde9711840ed6769c5c468d0d94 659 SMART SM00387 396 520 3.2E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_69920 7c949fde9711840ed6769c5c468d0d94 659 Pfam PF00072 Response regulator receiver domain 542 653 1.9E-17 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_69920 7c949fde9711840ed6769c5c468d0d94 659 SUPERFAMILY SSF55785 137 250 1.01E-25 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_69920 7c949fde9711840ed6769c5c468d0d94 659 SUPERFAMILY SSF55874 345 519 3.41E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_69920 7c949fde9711840ed6769c5c468d0d94 659 Gene3D G3DSA:3.30.450.20 10 123 2.2E-24 T 14-10-2018 AMIS_69920 7c949fde9711840ed6769c5c468d0d94 659 SUPERFAMILY SSF52172 539 658 6.55E-27 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_69920 7c949fde9711840ed6769c5c468d0d94 659 Gene3D G3DSA:3.30.450.20 124 239 3.9E-28 T 14-10-2018 AMIS_69920 7c949fde9711840ed6769c5c468d0d94 659 Pfam PF13426 PAS domain 136 241 6.2E-15 T 14-10-2018 IPR000014 PAS domain AMIS_69920 7c949fde9711840ed6769c5c468d0d94 659 Pfam PF13426 PAS domain 17 120 9.1E-10 T 14-10-2018 IPR000014 PAS domain AMIS_69920 7c949fde9711840ed6769c5c468d0d94 659 SMART SM00091 7 73 7.5E-8 T 14-10-2018 IPR000014 PAS domain AMIS_69920 7c949fde9711840ed6769c5c468d0d94 659 SMART SM00091 126 192 4.1E-12 T 14-10-2018 IPR000014 PAS domain AMIS_69920 7c949fde9711840ed6769c5c468d0d94 659 SUPERFAMILY SSF47384 268 353 5.49E-7 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_32090 b4eeccb71c8a9316c965cd73f9a70e7d 311 Gene3D G3DSA:3.20.20.30 6 311 1.0E-69 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_32090 b4eeccb71c8a9316c965cd73f9a70e7d 311 TIGRFAM TIGR03560 F420_Rv1855c: probable F420-dependent oxidoreductase, Rv1855c family 2 231 2.0E-86 T 14-10-2018 IPR019952 F420-dependent oxidoreductase-predicted, Rv1855c AMIS_32090 b4eeccb71c8a9316c965cd73f9a70e7d 311 SUPERFAMILY SSF51679 8 309 3.79E-70 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_32090 b4eeccb71c8a9316c965cd73f9a70e7d 311 Pfam PF00296 Luciferase-like monooxygenase 12 249 3.5E-47 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMIS_79250 8c5e86318a56f0292daa5f44f856651d 251 SMART SM00382 25 212 2.8E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_79250 8c5e86318a56f0292daa5f44f856651d 251 SUPERFAMILY SSF52540 4 223 1.02E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_79250 8c5e86318a56f0292daa5f44f856651d 251 Gene3D G3DSA:3.40.50.300 2 249 1.6E-66 T 14-10-2018 AMIS_79250 8c5e86318a56f0292daa5f44f856651d 251 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_79250 8c5e86318a56f0292daa5f44f856651d 251 Pfam PF00005 ABC transporter 18 162 1.6E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_21770 f479bb6eaadbf192e2aeb82d8a94edc2 250 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 187 2.1E-5 T 14-10-2018 AMIS_21770 f479bb6eaadbf192e2aeb82d8a94edc2 250 Gene3D G3DSA:3.40.50.720 1 246 2.5E-82 T 14-10-2018 AMIS_21770 f479bb6eaadbf192e2aeb82d8a94edc2 250 SUPERFAMILY SSF51735 5 244 1.9E-79 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_21770 f479bb6eaadbf192e2aeb82d8a94edc2 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 2.0E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_21770 f479bb6eaadbf192e2aeb82d8a94edc2 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.0E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_21770 f479bb6eaadbf192e2aeb82d8a94edc2 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 2.0E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_21770 f479bb6eaadbf192e2aeb82d8a94edc2 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 2.0E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_21770 f479bb6eaadbf192e2aeb82d8a94edc2 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 2.0E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_21770 f479bb6eaadbf192e2aeb82d8a94edc2 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 2.0E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_21770 f479bb6eaadbf192e2aeb82d8a94edc2 250 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMIS_21770 f479bb6eaadbf192e2aeb82d8a94edc2 250 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 244 1.6E-64 T 14-10-2018 AMIS_21770 f479bb6eaadbf192e2aeb82d8a94edc2 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 3.7E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_21770 f479bb6eaadbf192e2aeb82d8a94edc2 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 3.7E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_21770 f479bb6eaadbf192e2aeb82d8a94edc2 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 3.7E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_45740 dfd8d75ee2f1d5e19e3148d3edface6b 433 Pfam PF00149 Calcineurin-like phosphoesterase 217 373 4.1E-12 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AMIS_45740 dfd8d75ee2f1d5e19e3148d3edface6b 433 Gene3D G3DSA:3.60.21.10 215 401 1.6E-19 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like AMIS_45740 dfd8d75ee2f1d5e19e3148d3edface6b 433 SUPERFAMILY SSF56300 213 430 8.91E-36 T 14-10-2018 AMIS_46680 659402be60dcb11073b4ce0f8368f561 163 SUPERFAMILY SSF55729 4 161 5.66E-28 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_46680 659402be60dcb11073b4ce0f8368f561 163 Pfam PF00583 Acetyltransferase (GNAT) family 29 135 2.3E-12 T 14-10-2018 IPR000182 GNAT domain AMIS_46680 659402be60dcb11073b4ce0f8368f561 163 Gene3D G3DSA:3.40.630.30 2 162 5.1E-42 T 14-10-2018 AMIS_54880 d252d26b34e0086504e0164c1fa5737e 331 TIGRFAM TIGR03842 F420_CPS_4043: F420-dependent oxidoreductase, CPS_4043 family 2 330 6.1E-176 T 14-10-2018 IPR022315 F420-dependent oxidoreductase-predicted, CPS4043 AMIS_54880 d252d26b34e0086504e0164c1fa5737e 331 SUPERFAMILY SSF51679 2 328 3.27E-61 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_54880 d252d26b34e0086504e0164c1fa5737e 331 Pfam PF00296 Luciferase-like monooxygenase 13 305 5.4E-58 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMIS_54880 d252d26b34e0086504e0164c1fa5737e 331 Gene3D G3DSA:3.20.20.30 1 329 4.0E-74 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_76140 b482b961ea551a30091cd8272d282f6a 80 Gene3D G3DSA:3.30.70.1680 1 62 3.3E-27 T 14-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 AMIS_76140 b482b961ea551a30091cd8272d282f6a 80 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 3.0E-13 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 AMIS_76140 b482b961ea551a30091cd8272d282f6a 80 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 68 18.298 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 AMIS_76140 b482b961ea551a30091cd8272d282f6a 80 SUPERFAMILY SSF117130 1 54 1.28E-19 T 14-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 AMIS_76140 b482b961ea551a30091cd8272d282f6a 80 Pfam PF02599 Global regulator protein family 1 52 1.8E-25 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 AMIS_76140 b482b961ea551a30091cd8272d282f6a 80 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 66 4.3E-24 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 AMIS_31130 e9c89d402fbc1e64a38b94a26c960dac 142 Pfam PF00582 Universal stress protein family 5 142 2.6E-21 T 14-10-2018 IPR006016 UspA AMIS_31130 e9c89d402fbc1e64a38b94a26c960dac 142 SUPERFAMILY SSF52402 5 142 2.68E-23 T 14-10-2018 AMIS_31130 e9c89d402fbc1e64a38b94a26c960dac 142 Gene3D G3DSA:3.40.50.620 1 142 4.1E-23 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMIS_31130 e9c89d402fbc1e64a38b94a26c960dac 142 PRINTS PR01438 Universal stress protein signature 120 142 8.4E-5 T 14-10-2018 IPR006015 Universal stress protein A AMIS_31130 e9c89d402fbc1e64a38b94a26c960dac 142 PRINTS PR01438 Universal stress protein signature 2 20 8.4E-5 T 14-10-2018 IPR006015 Universal stress protein A AMIS_15580 d65766259f8a958f2ba3f4f0cb347dc8 202 SUPERFAMILY SSF55174 5 202 1.88E-55 T 14-10-2018 AMIS_15580 d65766259f8a958f2ba3f4f0cb347dc8 202 SMART SM00363 91 153 1.1E-15 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_15580 d65766259f8a958f2ba3f4f0cb347dc8 202 SMART SM01390 2 90 4.5E-33 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 AMIS_15580 d65766259f8a958f2ba3f4f0cb347dc8 202 ProSitePatterns PS00632 Ribosomal protein S4 signature. 89 113 - T 14-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_15580 d65766259f8a958f2ba3f4f0cb347dc8 202 Gene3D G3DSA:1.10.1050.10 6 202 1.1E-60 T 14-10-2018 AMIS_15580 d65766259f8a958f2ba3f4f0cb347dc8 202 Pfam PF01479 S4 domain 91 138 2.0E-16 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_15580 d65766259f8a958f2ba3f4f0cb347dc8 202 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 202 28.488 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 AMIS_15580 d65766259f8a958f2ba3f4f0cb347dc8 202 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 5 202 1.1E-60 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 AMIS_15580 d65766259f8a958f2ba3f4f0cb347dc8 202 Gene3D G3DSA:3.10.290.10 90 187 1.1E-60 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AMIS_15580 d65766259f8a958f2ba3f4f0cb347dc8 202 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 4 90 2.3E-20 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 AMIS_41710 fad664d339f02f4c220da03a4d863de9 258 SUPERFAMILY SSF56219 1 257 1.31E-28 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AMIS_41710 fad664d339f02f4c220da03a4d863de9 258 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 248 6.3E-14 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase AMIS_41710 fad664d339f02f4c220da03a4d863de9 258 Gene3D G3DSA:3.60.10.10 1 257 8.9E-45 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AMIS_65120 55c5cd69d4b1c5035b6f62588827ea09 1151 SUPERFAMILY SSF82171 711 1111 3.14E-52 T 14-10-2018 AMIS_65120 55c5cd69d4b1c5035b6f62588827ea09 1151 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 1048 1062 - T 14-10-2018 IPR019775 WD40 repeat, conserved site AMIS_65120 55c5cd69d4b1c5035b6f62588827ea09 1151 Pfam PF13676 TIR domain 6 113 9.0E-10 T 14-10-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 AMIS_65120 55c5cd69d4b1c5035b6f62588827ea09 1151 SMART SM00320 746 785 0.36 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_65120 55c5cd69d4b1c5035b6f62588827ea09 1151 SMART SM00320 1022 1061 9.1E-7 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_65120 55c5cd69d4b1c5035b6f62588827ea09 1151 SMART SM00320 838 875 5.9 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_65120 55c5cd69d4b1c5035b6f62588827ea09 1151 SMART SM00320 930 967 19.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_65120 55c5cd69d4b1c5035b6f62588827ea09 1151 SMART SM00320 698 736 0.32 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_65120 55c5cd69d4b1c5035b6f62588827ea09 1151 SMART SM00320 791 831 0.92 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_65120 55c5cd69d4b1c5035b6f62588827ea09 1151 SMART SM00320 1067 1110 340.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_65120 55c5cd69d4b1c5035b6f62588827ea09 1151 SMART SM00320 565 603 9.8E-4 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_65120 55c5cd69d4b1c5035b6f62588827ea09 1151 SMART SM00320 608 641 280.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_65120 55c5cd69d4b1c5035b6f62588827ea09 1151 SMART SM00320 881 924 0.74 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_65120 55c5cd69d4b1c5035b6f62588827ea09 1151 SMART SM00320 978 1016 3.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_65120 55c5cd69d4b1c5035b6f62588827ea09 1151 SMART SM00320 476 514 1.9 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_65120 55c5cd69d4b1c5035b6f62588827ea09 1151 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 590 604 - T 14-10-2018 IPR019775 WD40 repeat, conserved site AMIS_65120 55c5cd69d4b1c5035b6f62588827ea09 1151 Gene3D G3DSA:2.130.10.10 659 883 3.5E-31 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_65120 55c5cd69d4b1c5035b6f62588827ea09 1151 Gene3D G3DSA:2.130.10.10 893 1129 3.2E-39 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_65120 55c5cd69d4b1c5035b6f62588827ea09 1151 Pfam PF00400 WD domain, G-beta repeat 1026 1061 1.9E-4 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_65120 55c5cd69d4b1c5035b6f62588827ea09 1151 Pfam PF00400 WD domain, G-beta repeat 577 603 0.0018 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_65120 55c5cd69d4b1c5035b6f62588827ea09 1151 Gene3D G3DSA:2.130.10.10 414 658 1.6E-19 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_65120 55c5cd69d4b1c5035b6f62588827ea09 1151 SUPERFAMILY SSF52200 3 109 7.32E-10 T 14-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily AMIS_65120 55c5cd69d4b1c5035b6f62588827ea09 1151 SUPERFAMILY SSF50978 498 831 1.01E-40 T 14-10-2018 IPR036322 WD40-repeat-containing domain superfamily GO:0005515 AMIS_65120 55c5cd69d4b1c5035b6f62588827ea09 1151 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 501 515 - T 14-10-2018 IPR019775 WD40 repeat, conserved site AMIS_65120 55c5cd69d4b1c5035b6f62588827ea09 1151 Gene3D G3DSA:3.40.50.10140 1 111 7.0E-15 T 14-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily AMIS_65120 55c5cd69d4b1c5035b6f62588827ea09 1151 SMART SM00255 2 146 1.1E-4 T 14-10-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 AMIS_35880 93bad89fedb1d11aca44d5ca35741240 389 Pfam PF07730 Histidine kinase 190 255 2.3E-15 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMIS_35880 93bad89fedb1d11aca44d5ca35741240 389 SUPERFAMILY SSF55874 266 385 1.28E-13 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_35880 93bad89fedb1d11aca44d5ca35741240 389 Gene3D G3DSA:3.30.565.10 261 386 2.1E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_76910 b17e53b6a34c5286a42668d81dbb7b0c 364 Gene3D G3DSA:3.40.190.10 52 350 1.2E-109 T 14-10-2018 AMIS_76910 b17e53b6a34c5286a42668d81dbb7b0c 364 Pfam PF12849 PBP superfamily domain 37 333 2.6E-64 T 14-10-2018 IPR024370 PBP domain AMIS_76910 b17e53b6a34c5286a42668d81dbb7b0c 364 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 48 363 1.3E-89 T 14-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 AMIS_76910 b17e53b6a34c5286a42668d81dbb7b0c 364 Gene3D G3DSA:3.40.190.10 130 306 1.2E-109 T 14-10-2018 AMIS_76910 b17e53b6a34c5286a42668d81dbb7b0c 364 PIRSF PIRSF002756 4 364 5.6E-122 T 14-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 AMIS_76910 b17e53b6a34c5286a42668d81dbb7b0c 364 SUPERFAMILY SSF53850 48 364 3.23E-89 T 14-10-2018 AMIS_30940 c5190e72af4cbfcee7211ede7e72a702 212 Pfam PF01553 Acyltransferase 36 152 5.3E-19 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AMIS_30940 c5190e72af4cbfcee7211ede7e72a702 212 SMART SM00563 51 165 3.6E-21 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AMIS_30940 c5190e72af4cbfcee7211ede7e72a702 212 SUPERFAMILY SSF69593 15 188 1.57E-34 T 14-10-2018 AMIS_72210 87d83591a5697332889ffbc3742002b1 221 Gene3D G3DSA:1.20.1260.10 55 218 1.7E-54 T 14-10-2018 IPR012347 Ferritin-like AMIS_72210 87d83591a5697332889ffbc3742002b1 221 Pfam PF03713 Domain of unknown function (DUF305) 62 214 8.4E-45 T 14-10-2018 IPR005183 Domain of unknown function DUF305 AMIS_46120 36d988f146108f430617abbf46c6d223 394 Gene3D G3DSA:1.20.1250.20 192 375 3.4E-13 T 14-10-2018 AMIS_46120 36d988f146108f430617abbf46c6d223 394 Gene3D G3DSA:1.20.1250.20 3 189 2.2E-30 T 14-10-2018 AMIS_46120 36d988f146108f430617abbf46c6d223 394 SUPERFAMILY SSF103473 3 375 7.46E-55 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_46120 36d988f146108f430617abbf46c6d223 394 Pfam PF07690 Major Facilitator Superfamily 8 310 4.4E-34 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_71060 d925a5a77e4da9b3c954ae06af5f4e43 293 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_71060 d925a5a77e4da9b3c954ae06af5f4e43 293 SUPERFAMILY SSF52540 3 229 3.12E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_71060 d925a5a77e4da9b3c954ae06af5f4e43 293 Gene3D G3DSA:3.40.50.300 2 242 2.4E-60 T 14-10-2018 AMIS_71060 d925a5a77e4da9b3c954ae06af5f4e43 293 SMART SM00382 30 224 1.3E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_71060 d925a5a77e4da9b3c954ae06af5f4e43 293 Pfam PF00005 ABC transporter 22 166 9.3E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_69320 7b2f60d7ac21ce7f921ec76257c0ba7e 843 SMART SM00843 766 831 1.1E-29 T 14-10-2018 IPR018541 FtsK gamma domain AMIS_69320 7b2f60d7ac21ce7f921ec76257c0ba7e 843 Pfam PF09397 Ftsk gamma domain 772 828 9.1E-23 T 14-10-2018 IPR018541 FtsK gamma domain AMIS_69320 7b2f60d7ac21ce7f921ec76257c0ba7e 843 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 121 249 6.5E-15 T 14-10-2018 IPR025199 DNA translocase FtsK, 4TM region AMIS_69320 7b2f60d7ac21ce7f921ec76257c0ba7e 843 SUPERFAMILY SSF52540 439 738 7.27E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_69320 7b2f60d7ac21ce7f921ec76257c0ba7e 843 SMART SM00382 501 699 3.2E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_69320 7b2f60d7ac21ce7f921ec76257c0ba7e 843 SUPERFAMILY SSF46785 770 833 2.18E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_69320 7b2f60d7ac21ce7f921ec76257c0ba7e 843 Gene3D G3DSA:1.10.10.10 763 827 1.3E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_69320 7b2f60d7ac21ce7f921ec76257c0ba7e 843 Pfam PF01580 FtsK/SpoIIIE family 466 666 2.8E-58 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 AMIS_69320 7b2f60d7ac21ce7f921ec76257c0ba7e 843 Gene3D G3DSA:3.40.50.300 463 752 9.6E-106 T 14-10-2018 AMIS_69320 7b2f60d7ac21ce7f921ec76257c0ba7e 843 Gene3D G3DSA:3.30.980.40 360 462 5.4E-27 T 14-10-2018 AMIS_77290 3efb5e40af87dc024aaf3a50e9091be2 362 Gene3D G3DSA:2.40.50.140 287 346 1.6E-24 T 14-10-2018 AMIS_77290 3efb5e40af87dc024aaf3a50e9091be2 362 Gene3D G3DSA:3.40.50.300 4 223 4.2E-63 T 14-10-2018 AMIS_77290 3efb5e40af87dc024aaf3a50e9091be2 362 Pfam PF00005 ABC transporter 22 163 3.1E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_77290 3efb5e40af87dc024aaf3a50e9091be2 362 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_77290 3efb5e40af87dc024aaf3a50e9091be2 362 Pfam PF08402 TOBE domain 280 354 2.4E-5 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 AMIS_77290 3efb5e40af87dc024aaf3a50e9091be2 362 SMART SM00382 30 221 5.6E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_77290 3efb5e40af87dc024aaf3a50e9091be2 362 Gene3D G3DSA:2.40.50.940 224 355 1.6E-24 T 14-10-2018 AMIS_77290 3efb5e40af87dc024aaf3a50e9091be2 362 SUPERFAMILY SSF52540 7 244 8.76E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_77290 3efb5e40af87dc024aaf3a50e9091be2 362 SUPERFAMILY SSF50331 238 362 2.67E-21 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal AMIS_14900 7b3d51129255e04b04d16ecf4d0e7ed5 477 Pfam PF01593 Flavin containing amine oxidoreductase 12 277 1.8E-22 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 AMIS_14900 7b3d51129255e04b04d16ecf4d0e7ed5 477 Gene3D G3DSA:3.50.50.60 1 75 1.8E-19 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_14900 7b3d51129255e04b04d16ecf4d0e7ed5 477 Gene3D G3DSA:3.50.50.60 194 282 8.2E-14 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_14900 7b3d51129255e04b04d16ecf4d0e7ed5 477 SUPERFAMILY SSF51905 3 474 3.89E-56 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_14900 7b3d51129255e04b04d16ecf4d0e7ed5 477 TIGRFAM TIGR02734 crtI_fam: phytoene desaturase 4 474 3.3E-85 T 14-10-2018 IPR014105 Carotenoid/retinoid oxidoreductase GO:0016117|GO:0055114 AMIS_60860 16fff19a4eee5a3d06bbbd995a8ba374 138 Gene3D G3DSA:3.10.180.10 2 138 1.7E-22 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_60860 16fff19a4eee5a3d06bbbd995a8ba374 138 SUPERFAMILY SSF54593 8 136 4.54E-15 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_60860 16fff19a4eee5a3d06bbbd995a8ba374 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 14 134 1.9E-4 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMIS_76030 9cd7fd937dffaba49a8baa087477ae9e 165 Pfam PF10722 Putative bacterial sensory transduction regulator 5 124 2.1E-23 T 14-10-2018 IPR019660 Putative sensory transduction regulator YbjN AMIS_76030 9cd7fd937dffaba49a8baa087477ae9e 165 SUPERFAMILY SSF69635 1 127 4.08E-33 T 14-10-2018 AMIS_76030 9cd7fd937dffaba49a8baa087477ae9e 165 Gene3D G3DSA:3.30.1460.10 32 137 2.3E-10 T 14-10-2018 AMIS_43100 a7017c9dc08975247cb16f8d66a077f9 458 Pfam PF02353 Mycolic acid cyclopropane synthetase 162 436 1.8E-93 T 14-10-2018 AMIS_43100 a7017c9dc08975247cb16f8d66a077f9 458 PIRSF PIRSF003085 34 457 5.2E-128 T 14-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 AMIS_43100 a7017c9dc08975247cb16f8d66a077f9 458 Gene3D G3DSA:3.40.50.150 171 444 1.5E-95 T 14-10-2018 AMIS_43100 a7017c9dc08975247cb16f8d66a077f9 458 SUPERFAMILY SSF53335 172 440 1.69E-76 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_43100 a7017c9dc08975247cb16f8d66a077f9 458 SMART SM00828 Methyltransferase in polyketide synthase (PKS) enzymes. 181 441 0.0035 T 14-10-2018 IPR020803 Polyketide synthase, methyltransferase domain AMIS_61430 a8a1c066a99c735571fba056c5bf971e 598 SUPERFAMILY SSF51445 115 513 5.28E-80 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_61430 a8a1c066a99c735571fba056c5bf971e 598 SMART SM00642 127 504 7.7E-64 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMIS_61430 a8a1c066a99c735571fba056c5bf971e 598 Pfam PF00128 Alpha amylase, catalytic domain 265 473 5.8E-25 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMIS_61430 a8a1c066a99c735571fba056c5bf971e 598 Pfam PF00128 Alpha amylase, catalytic domain 171 256 1.1E-25 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMIS_61430 a8a1c066a99c735571fba056c5bf971e 598 Gene3D G3DSA:2.60.40.10 3 113 3.1E-8 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_61430 a8a1c066a99c735571fba056c5bf971e 598 Gene3D G3DSA:3.20.20.80 116 505 5.7E-97 T 14-10-2018 AMIS_61430 a8a1c066a99c735571fba056c5bf971e 598 SUPERFAMILY SSF81296 4 108 3.08E-5 T 14-10-2018 IPR014756 Immunoglobulin E-set AMIS_62150 9d6f608e70d8e94bbf17c6868458474d 383 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 263 279 3.4E-30 T 14-10-2018 AMIS_62150 9d6f608e70d8e94bbf17c6868458474d 383 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 305 316 3.4E-30 T 14-10-2018 AMIS_62150 9d6f608e70d8e94bbf17c6868458474d 383 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 280 297 3.4E-30 T 14-10-2018 AMIS_62150 9d6f608e70d8e94bbf17c6868458474d 383 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 232 246 3.4E-30 T 14-10-2018 AMIS_62150 9d6f608e70d8e94bbf17c6868458474d 383 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 193 207 3.4E-30 T 14-10-2018 AMIS_62150 9d6f608e70d8e94bbf17c6868458474d 383 SMART SM01097 17 147 2.5E-84 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMIS_62150 9d6f608e70d8e94bbf17c6868458474d 383 SUPERFAMILY SSF52317 169 380 2.17E-50 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_62150 9d6f608e70d8e94bbf17c6868458474d 383 PRINTS PR00096 Glutamine amidotransferase superfamily signature 263 274 1.2E-10 T 14-10-2018 AMIS_62150 9d6f608e70d8e94bbf17c6868458474d 383 PRINTS PR00096 Glutamine amidotransferase superfamily signature 235 244 1.2E-10 T 14-10-2018 AMIS_62150 9d6f608e70d8e94bbf17c6868458474d 383 PRINTS PR00096 Glutamine amidotransferase superfamily signature 354 367 1.2E-10 T 14-10-2018 AMIS_62150 9d6f608e70d8e94bbf17c6868458474d 383 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 19 145 2.5E-50 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMIS_62150 9d6f608e70d8e94bbf17c6868458474d 383 Pfam PF00117 Glutamine amidotransferase class-I 197 377 4.1E-38 T 14-10-2018 IPR017926 Glutamine amidotransferase AMIS_62150 9d6f608e70d8e94bbf17c6868458474d 383 Gene3D G3DSA:3.50.30.20 17 163 6.3E-55 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMIS_62150 9d6f608e70d8e94bbf17c6868458474d 383 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 19 380 5.7E-132 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMIS_62150 9d6f608e70d8e94bbf17c6868458474d 383 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 17 383 45.062 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMIS_62150 9d6f608e70d8e94bbf17c6868458474d 383 PRINTS PR00097 Anthranilate synthase component II signature 354 367 1.1E-6 T 14-10-2018 AMIS_62150 9d6f608e70d8e94bbf17c6868458474d 383 PRINTS PR00097 Anthranilate synthase component II signature 263 274 1.1E-6 T 14-10-2018 AMIS_62150 9d6f608e70d8e94bbf17c6868458474d 383 PRINTS PR00097 Anthranilate synthase component II signature 235 244 1.1E-6 T 14-10-2018 AMIS_62150 9d6f608e70d8e94bbf17c6868458474d 383 SUPERFAMILY SSF52021 18 160 2.22E-54 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMIS_62150 9d6f608e70d8e94bbf17c6868458474d 383 Gene3D G3DSA:3.40.50.880 165 382 7.4E-57 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_75270 29a6fbd582a5641da776195c8f62121b 174 Gene3D G3DSA:1.10.10.10 102 161 8.5E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_75270 29a6fbd582a5641da776195c8f62121b 174 Gene3D G3DSA:1.10.1740.10 1 101 3.1E-10 T 14-10-2018 AMIS_75270 29a6fbd582a5641da776195c8f62121b 174 SUPERFAMILY SSF88659 94 158 1.87E-11 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_75270 29a6fbd582a5641da776195c8f62121b 174 Pfam PF08281 Sigma-70, region 4 102 154 8.5E-8 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_75270 29a6fbd582a5641da776195c8f62121b 174 Pfam PF04542 Sigma-70 region 2 11 75 1.9E-6 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_75270 29a6fbd582a5641da776195c8f62121b 174 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 9 158 2.4E-15 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_75270 29a6fbd582a5641da776195c8f62121b 174 SUPERFAMILY SSF88946 4 90 1.73E-13 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_16980 4b3d9d65953a88d23b3bd7e04a09fe02 296 SUPERFAMILY SSF161098 25 296 1.21E-66 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_16980 4b3d9d65953a88d23b3bd7e04a09fe02 296 Gene3D G3DSA:1.10.3720.10 12 287 8.8E-63 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_16980 4b3d9d65953a88d23b3bd7e04a09fe02 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 102 290 3.8E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_46790 47c9261f5c4ea11d5a795736bfa2030f 1360 SMART SM00091 745 812 0.0074 T 14-10-2018 IPR000014 PAS domain AMIS_46790 47c9261f5c4ea11d5a795736bfa2030f 1360 Gene3D G3DSA:3.30.450.20 747 875 1.5E-15 T 14-10-2018 AMIS_46790 47c9261f5c4ea11d5a795736bfa2030f 1360 SUPERFAMILY SSF55781 868 995 5.02E-5 T 14-10-2018 AMIS_46790 47c9261f5c4ea11d5a795736bfa2030f 1360 SUPERFAMILY SSF55874 397 563 4.32E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_46790 47c9261f5c4ea11d5a795736bfa2030f 1360 SUPERFAMILY SSF55781 184 335 3.71E-9 T 14-10-2018 AMIS_46790 47c9261f5c4ea11d5a795736bfa2030f 1360 Pfam PF00512 His Kinase A (phospho-acceptor) domain 344 408 2.4E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_46790 47c9261f5c4ea11d5a795736bfa2030f 1360 SUPERFAMILY SSF52172 615 747 7.83E-41 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_46790 47c9261f5c4ea11d5a795736bfa2030f 1360 SUPERFAMILY SSF55874 1269 1348 2.88E-8 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_46790 47c9261f5c4ea11d5a795736bfa2030f 1360 SMART SM00388 344 408 2.3E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_46790 47c9261f5c4ea11d5a795736bfa2030f 1360 Gene3D G3DSA:3.30.565.10 1234 1359 2.6E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_46790 47c9261f5c4ea11d5a795736bfa2030f 1360 PRINTS PR00344 Bacterial sensor protein C-terminal signature 549 562 1.5E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_46790 47c9261f5c4ea11d5a795736bfa2030f 1360 PRINTS PR00344 Bacterial sensor protein C-terminal signature 490 504 1.5E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_46790 47c9261f5c4ea11d5a795736bfa2030f 1360 PRINTS PR00344 Bacterial sensor protein C-terminal signature 508 518 1.5E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_46790 47c9261f5c4ea11d5a795736bfa2030f 1360 PRINTS PR00344 Bacterial sensor protein C-terminal signature 525 543 1.5E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_46790 47c9261f5c4ea11d5a795736bfa2030f 1360 Gene3D G3DSA:3.30.565.10 410 565 1.9E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_46790 47c9261f5c4ea11d5a795736bfa2030f 1360 SUPERFAMILY SSF55785 42 152 6.07E-5 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_46790 47c9261f5c4ea11d5a795736bfa2030f 1360 Gene3D G3DSA:1.10.287.130 335 409 3.7E-21 T 14-10-2018 AMIS_46790 47c9261f5c4ea11d5a795736bfa2030f 1360 SMART SM00448 617 730 6.4E-41 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_46790 47c9261f5c4ea11d5a795736bfa2030f 1360 Gene3D G3DSA:3.30.450.20 34 165 3.9E-17 T 14-10-2018 AMIS_46790 47c9261f5c4ea11d5a795736bfa2030f 1360 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 460 563 3.9E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_46790 47c9261f5c4ea11d5a795736bfa2030f 1360 Pfam PF00072 Response regulator receiver domain 619 730 1.3E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_46790 47c9261f5c4ea11d5a795736bfa2030f 1360 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 1047 1232 1.7E-42 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_46790 47c9261f5c4ea11d5a795736bfa2030f 1360 Gene3D G3DSA:3.30.450.40 166 334 1.6E-6 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_46790 47c9261f5c4ea11d5a795736bfa2030f 1360 Pfam PF08448 PAS fold 65 159 3.6E-5 T 14-10-2018 IPR013656 PAS fold-4 AMIS_46790 47c9261f5c4ea11d5a795736bfa2030f 1360 Pfam PF08448 PAS fold 751 864 4.3E-8 T 14-10-2018 IPR013656 PAS fold-4 AMIS_46790 47c9261f5c4ea11d5a795736bfa2030f 1360 SUPERFAMILY SSF55785 750 862 3.84E-14 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_46790 47c9261f5c4ea11d5a795736bfa2030f 1360 Pfam PF13581 Histidine kinase-like ATPase domain 1241 1355 6.3E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_46790 47c9261f5c4ea11d5a795736bfa2030f 1360 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 745 865 1.8E-13 T 14-10-2018 IPR000014 PAS domain AMIS_46790 47c9261f5c4ea11d5a795736bfa2030f 1360 Gene3D G3DSA:3.40.50.2300 614 746 2.3E-38 T 14-10-2018 AMIS_46790 47c9261f5c4ea11d5a795736bfa2030f 1360 SUPERFAMILY SSF47384 329 409 5.3E-18 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_46790 47c9261f5c4ea11d5a795736bfa2030f 1360 SMART SM00331 1018 1233 4.5E-36 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_46790 47c9261f5c4ea11d5a795736bfa2030f 1360 SMART SM00387 454 565 2.1E-37 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_46790 47c9261f5c4ea11d5a795736bfa2030f 1360 Gene3D G3DSA:3.60.40.10 1016 1233 3.7E-54 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_50500 bd75e7f034a0b3b5eb65bb579b0a6c5d 283 Pfam PF00486 Transcriptional regulatory protein, C terminal 34 88 2.2E-8 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_50500 bd75e7f034a0b3b5eb65bb579b0a6c5d 283 Pfam PF03704 Bacterial transcriptional activator domain 116 261 3.8E-39 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain AMIS_50500 bd75e7f034a0b3b5eb65bb579b0a6c5d 283 SUPERFAMILY SSF46894 13 88 1.3E-13 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_50500 bd75e7f034a0b3b5eb65bb579b0a6c5d 283 SUPERFAMILY SSF48452 113 281 8.34E-33 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_50500 bd75e7f034a0b3b5eb65bb579b0a6c5d 283 Gene3D G3DSA:1.25.40.10 115 275 1.4E-39 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_50500 bd75e7f034a0b3b5eb65bb579b0a6c5d 283 SMART SM01043 116 261 1.4E-39 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain AMIS_50500 bd75e7f034a0b3b5eb65bb579b0a6c5d 283 Gene3D G3DSA:1.10.10.10 4 111 7.5E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_50500 bd75e7f034a0b3b5eb65bb579b0a6c5d 283 SMART SM00862 27 109 0.0012 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_36060 90a4efa31ff07f4e65dd86a60c69f968 332 Gene3D G3DSA:3.90.180.10 1 332 4.6E-78 T 14-10-2018 AMIS_36060 90a4efa31ff07f4e65dd86a60c69f968 332 Pfam PF00107 Zinc-binding dehydrogenase 167 290 1.9E-20 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMIS_36060 90a4efa31ff07f4e65dd86a60c69f968 332 SUPERFAMILY SSF51735 130 293 5.3E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_36060 90a4efa31ff07f4e65dd86a60c69f968 332 SMART SM00829 14 330 3.5E-7 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMIS_36060 90a4efa31ff07f4e65dd86a60c69f968 332 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 123 2.6E-15 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMIS_36060 90a4efa31ff07f4e65dd86a60c69f968 332 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 64 78 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AMIS_36060 90a4efa31ff07f4e65dd86a60c69f968 332 SUPERFAMILY SSF50129 3 161 1.83E-39 T 14-10-2018 IPR011032 GroES-like superfamily AMIS_64160 305749d6dc94bc68fffe0026729979a9 623 SUPERFAMILY SSF51445 396 620 2.21E-23 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_64160 305749d6dc94bc68fffe0026729979a9 623 Pfam PF04542 Sigma-70 region 2 31 97 9.4E-14 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_64160 305749d6dc94bc68fffe0026729979a9 623 Gene3D G3DSA:1.10.1740.10 8 114 7.2E-20 T 14-10-2018 AMIS_64160 305749d6dc94bc68fffe0026729979a9 623 Pfam PF11790 Glycosyl hydrolase catalytic core 398 619 1.1E-55 T 14-10-2018 IPR024655 Uncharacterised protein family, glycosyl hydrolase catalytic domain AMIS_64160 305749d6dc94bc68fffe0026729979a9 623 Gene3D G3DSA:3.20.20.80 393 622 9.7E-16 T 14-10-2018 AMIS_64160 305749d6dc94bc68fffe0026729979a9 623 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 27 186 4.5E-17 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_64160 305749d6dc94bc68fffe0026729979a9 623 SUPERFAMILY SSF88946 8 110 1.13E-20 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_64160 305749d6dc94bc68fffe0026729979a9 623 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 53 84 - T 14-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_34010 59fe7892b7a506e19372d46165a0c2ac 166 TIGRFAM TIGR02983 SigE-fam_strep: RNA polymerase sigma-70 factor, sigma-E family 3 159 1.5E-48 T 14-10-2018 IPR014325 RNA polymerase sigma-E factor, actinobacteria GO:0016987 AMIS_34010 59fe7892b7a506e19372d46165a0c2ac 166 Gene3D G3DSA:1.10.1740.10 3 71 1.3E-9 T 14-10-2018 AMIS_34010 59fe7892b7a506e19372d46165a0c2ac 166 SUPERFAMILY SSF88946 2 95 6.67E-12 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_34010 59fe7892b7a506e19372d46165a0c2ac 166 Pfam PF04542 Sigma-70 region 2 16 76 1.6E-7 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_34010 59fe7892b7a506e19372d46165a0c2ac 166 Pfam PF08281 Sigma-70, region 4 101 154 6.2E-15 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_34010 59fe7892b7a506e19372d46165a0c2ac 166 Gene3D G3DSA:1.10.10.10 83 160 1.5E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_34010 59fe7892b7a506e19372d46165a0c2ac 166 SUPERFAMILY SSF88659 98 158 1.81E-15 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_34010 59fe7892b7a506e19372d46165a0c2ac 166 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 18 157 1.2E-17 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_72200 f04694547ce0d7517a7f237ed8468049 176 SMART SM00347 42 142 5.4E-19 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_72200 f04694547ce0d7517a7f237ed8468049 176 Pfam PF01047 MarR family 49 106 1.3E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_72200 f04694547ce0d7517a7f237ed8468049 176 SUPERFAMILY SSF46785 25 154 5.15E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_72200 f04694547ce0d7517a7f237ed8468049 176 Gene3D G3DSA:1.10.10.10 4 160 7.8E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_72200 f04694547ce0d7517a7f237ed8468049 176 ProSitePatterns PS01117 MarR-type HTH domain signature. 80 115 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site AMIS_72200 f04694547ce0d7517a7f237ed8468049 176 PRINTS PR00598 Bacterial regulatory protein MarR family signature 132 152 6.8E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_72200 f04694547ce0d7517a7f237ed8468049 176 PRINTS PR00598 Bacterial regulatory protein MarR family signature 83 98 6.8E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_72200 f04694547ce0d7517a7f237ed8468049 176 PRINTS PR00598 Bacterial regulatory protein MarR family signature 102 118 6.8E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_72200 f04694547ce0d7517a7f237ed8468049 176 PRINTS PR00598 Bacterial regulatory protein MarR family signature 66 82 6.8E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_63980 bc46666f7b267b716356bacb75f5bffc 300 SUPERFAMILY SSF159659 5 267 9.81E-85 T 14-10-2018 AMIS_63980 bc46666f7b267b716356bacb75f5bffc 300 Pfam PF09754 PAC2 family 26 242 1.4E-46 T 14-10-2018 IPR019151 Proteasome assembly chaperone 2 AMIS_63980 bc46666f7b267b716356bacb75f5bffc 300 PIRSF PIRSF028754 9 300 1.3E-95 T 14-10-2018 IPR008492 Protein of unknown function DUF774 AMIS_63980 bc46666f7b267b716356bacb75f5bffc 300 Gene3D G3DSA:1.10.287.100 224 262 2.3E-86 T 14-10-2018 AMIS_63980 bc46666f7b267b716356bacb75f5bffc 300 Gene3D G3DSA:3.40.50.10900 20 223 2.3E-86 T 14-10-2018 IPR038389 Proteasome assembly chaperone 2 superfamily AMIS_25140 aae0dba8b326f9b4cd13e21d58bac340 922 Pfam PF07995 Glucose / Sorbosone dehydrogenase 41 334 1.0E-34 T 14-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase AMIS_25140 aae0dba8b326f9b4cd13e21d58bac340 922 Gene3D G3DSA:2.120.10.30 15 475 4.4E-71 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AMIS_25140 aae0dba8b326f9b4cd13e21d58bac340 922 SUPERFAMILY SSF49299 479 566 1.44E-23 T 14-10-2018 IPR035986 PKD domain superfamily AMIS_25140 aae0dba8b326f9b4cd13e21d58bac340 922 Gene3D G3DSA:2.80.10.50 891 922 2.2E-9 T 14-10-2018 AMIS_25140 aae0dba8b326f9b4cd13e21d58bac340 922 Gene3D G3DSA:2.60.120.260 667 797 5.7E-31 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_25140 aae0dba8b326f9b4cd13e21d58bac340 922 Pfam PF00652 Ricin-type beta-trefoil lectin domain 801 919 1.4E-27 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_25140 aae0dba8b326f9b4cd13e21d58bac340 922 Gene3D G3DSA:2.60.40.10 476 563 2.3E-27 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_25140 aae0dba8b326f9b4cd13e21d58bac340 922 Pfam PF03422 Carbohydrate binding module (family 6) 673 795 7.8E-31 T 14-10-2018 IPR005084 Carbohydrate binding module family 6 GO:0030246 AMIS_25140 aae0dba8b326f9b4cd13e21d58bac340 922 SUPERFAMILY SSF50370 804 921 1.73E-36 T 14-10-2018 IPR035992 Ricin B-like lectins AMIS_25140 aae0dba8b326f9b4cd13e21d58bac340 922 Gene3D G3DSA:2.80.10.50 798 890 4.1E-29 T 14-10-2018 AMIS_25140 aae0dba8b326f9b4cd13e21d58bac340 922 Pfam PF00801 PKD domain 486 553 9.5E-12 T 14-10-2018 IPR000601 PKD domain AMIS_25140 aae0dba8b326f9b4cd13e21d58bac340 922 SUPERFAMILY SSF50952 20 459 2.75E-24 T 14-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 AMIS_25140 aae0dba8b326f9b4cd13e21d58bac340 922 SMART SM00089 483 566 7.9E-21 T 14-10-2018 IPR022409 PKD/Chitinase domain AMIS_25140 aae0dba8b326f9b4cd13e21d58bac340 922 SUPERFAMILY SSF49785 668 795 2.21E-24 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_25140 aae0dba8b326f9b4cd13e21d58bac340 922 SMART SM00458 791 922 2.6E-26 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_25140 aae0dba8b326f9b4cd13e21d58bac340 922 SMART SM00606 665 796 1.5E-37 T 14-10-2018 IPR006584 Cellulose binding, type IV GO:0030246 AMIS_23780 7ec01886ab560afef0b9f50044f86b59 204 SMART SM00421 141 198 6.3E-27 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_23780 7ec01886ab560afef0b9f50044f86b59 204 Gene3D G3DSA:3.40.50.12740 3 204 4.6E-70 T 14-10-2018 AMIS_23780 7ec01886ab560afef0b9f50044f86b59 204 ProSitePatterns PS00622 LuxR-type HTH domain signature. 158 185 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_23780 7ec01886ab560afef0b9f50044f86b59 204 Pfam PF00196 Bacterial regulatory proteins, luxR family 142 198 5.0E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_23780 7ec01886ab560afef0b9f50044f86b59 204 SUPERFAMILY SSF52172 3 131 2.13E-34 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_23780 7ec01886ab560afef0b9f50044f86b59 204 Pfam PF00072 Response regulator receiver domain 5 117 5.1E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_23780 7ec01886ab560afef0b9f50044f86b59 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 144 158 1.0E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_23780 7ec01886ab560afef0b9f50044f86b59 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 158 174 1.0E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_23780 7ec01886ab560afef0b9f50044f86b59 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 174 186 1.0E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_23780 7ec01886ab560afef0b9f50044f86b59 204 SUPERFAMILY SSF46894 133 203 9.52E-23 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_23780 7ec01886ab560afef0b9f50044f86b59 204 SMART SM00448 3 116 2.4E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_58420 78b6aa0688831d68bc133cb63154a28e 195 Pfam PF01872 RibD C-terminal domain 3 170 7.8E-8 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 AMIS_58420 78b6aa0688831d68bc133cb63154a28e 195 SUPERFAMILY SSF53597 41 194 1.3E-18 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AMIS_58420 78b6aa0688831d68bc133cb63154a28e 195 Gene3D G3DSA:3.40.430.10 1 193 6.5E-35 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AMIS_38810 b123569307467a365c3cfaf74c2e4913 353 Gene3D G3DSA:3.40.50.2300 61 330 4.8E-63 T 14-10-2018 AMIS_38810 b123569307467a365c3cfaf74c2e4913 353 Gene3D G3DSA:3.40.50.2300 177 313 4.8E-63 T 14-10-2018 AMIS_38810 b123569307467a365c3cfaf74c2e4913 353 SMART SM00354 7 77 1.6E-20 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_38810 b123569307467a365c3cfaf74c2e4913 353 Pfam PF13377 Periplasmic binding protein-like domain 186 352 6.9E-33 T 14-10-2018 AMIS_38810 b123569307467a365c3cfaf74c2e4913 353 Pfam PF00356 Bacterial regulatory proteins, lacI family 9 54 1.3E-15 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_38810 b123569307467a365c3cfaf74c2e4913 353 SUPERFAMILY SSF47413 7 66 4.14E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_38810 b123569307467a365c3cfaf74c2e4913 353 SUPERFAMILY SSF53822 88 352 1.61E-58 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_38810 b123569307467a365c3cfaf74c2e4913 353 Gene3D G3DSA:1.10.260.40 2 60 7.0E-21 T 14-10-2018 AMIS_10750 14181d0c6ce9cde79ab49abb295dc2f4 511 Gene3D G3DSA:3.40.50.300 8 246 3.3E-51 T 14-10-2018 AMIS_10750 14181d0c6ce9cde79ab49abb295dc2f4 511 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 264 441 4.3E-46 T 14-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 AMIS_10750 14181d0c6ce9cde79ab49abb295dc2f4 511 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 498 174.394 T 14-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 AMIS_10750 14181d0c6ce9cde79ab49abb295dc2f4 511 SUPERFAMILY SSF52540 8 246 1.46E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_10750 14181d0c6ce9cde79ab49abb295dc2f4 511 Gene3D G3DSA:3.40.50.880 263 448 3.0E-26 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_10750 14181d0c6ce9cde79ab49abb295dc2f4 511 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 9 489 5.8E-130 T 14-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 AMIS_10750 14181d0c6ce9cde79ab49abb295dc2f4 511 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 8 238 3.7E-19 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AMIS_10750 14181d0c6ce9cde79ab49abb295dc2f4 511 SUPERFAMILY SSF52317 263 447 1.67E-37 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_37330 cac1a97acd48728c243280008b059d88 811 Gene3D G3DSA:3.40.50.920 623 810 2.6E-67 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AMIS_37330 cac1a97acd48728c243280008b059d88 811 Gene3D G3DSA:3.40.50.970 16 405 1.8E-159 T 14-10-2018 AMIS_37330 cac1a97acd48728c243280008b059d88 811 SUPERFAMILY SSF52518 395 606 4.94E-23 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold AMIS_37330 cac1a97acd48728c243280008b059d88 811 ProSitePatterns PS60003 Phosphoketolase signature 2. 175 193 - T 14-10-2018 IPR019789 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, thiamine diphosphate binding site GO:0005975|GO:0016832 AMIS_37330 cac1a97acd48728c243280008b059d88 811 PIRSF PIRSF017245 3 807 0.0 T 14-10-2018 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 AMIS_37330 cac1a97acd48728c243280008b059d88 811 SUPERFAMILY SSF52518 28 387 2.32E-61 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold AMIS_37330 cac1a97acd48728c243280008b059d88 811 ProSitePatterns PS60002 Phosphoketolase signature 1. 162 168 - T 14-10-2018 IPR019790 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, conserved site GO:0005975|GO:0016832 AMIS_37330 cac1a97acd48728c243280008b059d88 811 Pfam PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase 418 592 5.4E-80 T 14-10-2018 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 AMIS_37330 cac1a97acd48728c243280008b059d88 811 Pfam PF09363 XFP C-terminal domain 603 804 1.0E-81 T 14-10-2018 IPR018969 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal GO:0005975|GO:0016832 AMIS_37330 cac1a97acd48728c243280008b059d88 811 Pfam PF09364 XFP N-terminal domain 27 404 2.3E-166 T 14-10-2018 IPR018970 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal AMIS_37330 cac1a97acd48728c243280008b059d88 811 Gene3D G3DSA:3.40.50.970 406 622 3.6E-93 T 14-10-2018 AMIS_69860 8063881f5bfd74ae4b43d1c66c99221d 710 Pfam PF12698 ABC-2 family transporter protein 505 690 3.0E-11 T 14-10-2018 AMIS_69860 8063881f5bfd74ae4b43d1c66c99221d 710 TIGRFAM TIGR03062 pip_yhgE_Cterm: YhgE/Pip C-terminal domain 493 697 6.4E-66 T 14-10-2018 IPR017501 Phage infection protein, YhgE, C-terminal AMIS_69860 8063881f5bfd74ae4b43d1c66c99221d 710 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 221 247 9.8E-6 T 14-10-2018 IPR023908 xxxLxxG heptad repeat AMIS_69860 8063881f5bfd74ae4b43d1c66c99221d 710 TIGRFAM TIGR03061 pip_yhgE_Nterm: YhgE/Pip N-terminal domain 10 175 1.5E-47 T 14-10-2018 IPR017500 Phage infection protein, YhgE, N-terminal AMIS_69860 8063881f5bfd74ae4b43d1c66c99221d 710 SUPERFAMILY SSF58104 229 360 7.59E-5 T 14-10-2018 AMIS_57150 6ec687b9b8b90f4b735a79452a359512 268 Pfam PF09339 IclR helix-turn-helix domain 20 72 5.5E-13 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AMIS_57150 6ec687b9b8b90f4b735a79452a359512 268 Pfam PF01614 Bacterial transcriptional regulator 136 261 9.8E-34 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal AMIS_57150 6ec687b9b8b90f4b735a79452a359512 268 Gene3D G3DSA:3.30.450.40 88 268 1.1E-55 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_57150 6ec687b9b8b90f4b735a79452a359512 268 SUPERFAMILY SSF55781 86 266 1.11E-50 T 14-10-2018 AMIS_57150 6ec687b9b8b90f4b735a79452a359512 268 SUPERFAMILY SSF46785 19 92 8.71E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_57150 6ec687b9b8b90f4b735a79452a359512 268 SMART SM00346 18 109 3.2E-20 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AMIS_57150 6ec687b9b8b90f4b735a79452a359512 268 Gene3D G3DSA:1.10.10.10 12 87 1.4E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_70980 12f53f1a3cdcbdea77d34d55bb0a3b59 913 PRINTS PR00364 Disease resistance protein signature 34 49 1.0E-5 T 14-10-2018 AMIS_70980 12f53f1a3cdcbdea77d34d55bb0a3b59 913 PRINTS PR00364 Disease resistance protein signature 122 136 1.0E-5 T 14-10-2018 AMIS_70980 12f53f1a3cdcbdea77d34d55bb0a3b59 913 PRINTS PR00364 Disease resistance protein signature 214 228 1.0E-5 T 14-10-2018 AMIS_70980 12f53f1a3cdcbdea77d34d55bb0a3b59 913 SMART SM00421 854 911 2.1E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_70980 12f53f1a3cdcbdea77d34d55bb0a3b59 913 Pfam PF00196 Bacterial regulatory proteins, luxR family 856 907 2.9E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_70980 12f53f1a3cdcbdea77d34d55bb0a3b59 913 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 857 871 3.4E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_70980 12f53f1a3cdcbdea77d34d55bb0a3b59 913 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 871 887 3.4E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_70980 12f53f1a3cdcbdea77d34d55bb0a3b59 913 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 887 899 3.4E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_70980 12f53f1a3cdcbdea77d34d55bb0a3b59 913 SUPERFAMILY SSF46894 852 908 2.01E-15 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_70980 12f53f1a3cdcbdea77d34d55bb0a3b59 913 Gene3D G3DSA:1.10.10.10 851 912 1.2E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_70980 12f53f1a3cdcbdea77d34d55bb0a3b59 913 SUPERFAMILY SSF52540 7 230 2.39E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_70980 12f53f1a3cdcbdea77d34d55bb0a3b59 913 Gene3D G3DSA:1.25.40.10 665 850 3.8E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_70980 12f53f1a3cdcbdea77d34d55bb0a3b59 913 Pfam PF13191 AAA ATPase domain 9 159 1.4E-15 T 14-10-2018 AMIS_70980 12f53f1a3cdcbdea77d34d55bb0a3b59 913 SUPERFAMILY SSF48452 520 821 5.22E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_7250 016ab3a9b31e2c778a42abc82d993ce9 866 Gene3D G3DSA:3.40.309.10 217 409 1.8E-175 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AMIS_7250 016ab3a9b31e2c778a42abc82d993ce9 866 Gene3D G3DSA:3.40.605.10 10 448 1.8E-175 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AMIS_7250 016ab3a9b31e2c778a42abc82d993ce9 866 PIRSF PIRSF000111 2 866 0.0 T 14-10-2018 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 AMIS_7250 016ab3a9b31e2c778a42abc82d993ce9 866 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 635 663 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AMIS_7250 016ab3a9b31e2c778a42abc82d993ce9 866 Pfam PF00465 Iron-containing alcohol dehydrogenase 461 853 8.0E-114 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AMIS_7250 016ab3a9b31e2c778a42abc82d993ce9 866 Gene3D G3DSA:3.40.50.1970 454 646 2.6E-61 T 14-10-2018 AMIS_7250 016ab3a9b31e2c778a42abc82d993ce9 866 SUPERFAMILY SSF56796 453 865 5.5E-115 T 14-10-2018 AMIS_7250 016ab3a9b31e2c778a42abc82d993ce9 866 Gene3D G3DSA:1.20.1090.10 648 865 1.3E-69 T 14-10-2018 AMIS_7250 016ab3a9b31e2c778a42abc82d993ce9 866 SUPERFAMILY SSF53720 6 457 6.54E-77 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMIS_7250 016ab3a9b31e2c778a42abc82d993ce9 866 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 723 743 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AMIS_7250 016ab3a9b31e2c778a42abc82d993ce9 866 Pfam PF00171 Aldehyde dehydrogenase family 5 267 1.2E-20 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AMIS_80980 11a4494d4f3494fc0646272da96a4163 218 Gene3D G3DSA:1.10.10.10 1 97 3.8E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_80980 11a4494d4f3494fc0646272da96a4163 218 Pfam PF03551 Transcriptional regulator PadR-like family 6 86 1.2E-15 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal AMIS_80980 11a4494d4f3494fc0646272da96a4163 218 SUPERFAMILY SSF46785 2 175 1.19E-30 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_18080 fb1cc382845a9c92ace41283bf2c17e8 181 Pfam PF03729 Short repeat of unknown function (DUF308) 72 136 4.1E-4 T 14-10-2018 IPR005325 Protein of unknown function DUF308, membrane AMIS_18080 fb1cc382845a9c92ace41283bf2c17e8 181 Pfam PF03729 Short repeat of unknown function (DUF308) 13 85 1.8E-9 T 14-10-2018 IPR005325 Protein of unknown function DUF308, membrane AMIS_76170 9a27be3a2ec091adb7acf891658902ae 476 Pfam PF00460 Flagella basal body rod protein 8 38 1.5E-6 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AMIS_76170 9a27be3a2ec091adb7acf891658902ae 476 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 423 469 2.7E-14 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AMIS_76170 9a27be3a2ec091adb7acf891658902ae 476 SUPERFAMILY SSF64518 94 469 1.7E-15 T 14-10-2018 AMIS_76170 9a27be3a2ec091adb7acf891658902ae 476 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 6 469 2.8E-98 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AMIS_73340 51b2b16a4f613e0d5b610571f8768a22 715 Pfam PF00570 HRDC domain 634 699 4.5E-20 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 AMIS_73340 51b2b16a4f613e0d5b610571f8768a22 715 Gene3D G3DSA:1.10.486.10 415 489 1.0E-30 T 14-10-2018 AMIS_73340 51b2b16a4f613e0d5b610571f8768a22 715 Gene3D G3DSA:1.10.486.10 388 405 9.4E-28 T 14-10-2018 AMIS_73340 51b2b16a4f613e0d5b610571f8768a22 715 SUPERFAMILY SSF47819 624 703 4.14E-21 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 AMIS_73340 51b2b16a4f613e0d5b610571f8768a22 715 Pfam PF13361 UvrD-like helicase C-terminal domain 281 405 9.6E-16 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AMIS_73340 51b2b16a4f613e0d5b610571f8768a22 715 Gene3D G3DSA:1.10.10.160 109 192 8.6E-71 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily AMIS_73340 51b2b16a4f613e0d5b610571f8768a22 715 SUPERFAMILY SSF52540 3 577 4.26E-118 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_73340 51b2b16a4f613e0d5b610571f8768a22 715 SMART SM00341 630 710 8.2E-14 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 AMIS_73340 51b2b16a4f613e0d5b610571f8768a22 715 Pfam PF13361 UvrD-like helicase C-terminal domain 439 559 2.4E-23 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AMIS_73340 51b2b16a4f613e0d5b610571f8768a22 715 Pfam PF13245 AAA domain 14 259 6.8E-37 T 14-10-2018 AMIS_73340 51b2b16a4f613e0d5b610571f8768a22 715 Gene3D G3DSA:3.40.50.300 286 387 9.4E-28 T 14-10-2018 AMIS_73340 51b2b16a4f613e0d5b610571f8768a22 715 Gene3D G3DSA:3.40.50.300 490 574 1.0E-30 T 14-10-2018 AMIS_73340 51b2b16a4f613e0d5b610571f8768a22 715 Gene3D G3DSA:3.40.50.300 10 272 8.6E-71 T 14-10-2018 AMIS_73340 51b2b16a4f613e0d5b610571f8768a22 715 Gene3D G3DSA:1.10.150.80 627 706 2.1E-20 T 14-10-2018 AMIS_72950 8246a6fde9ed581ac15ae33d8af8505e 563 Gene3D G3DSA:3.90.480.20 32 403 1.6E-119 T 14-10-2018 AMIS_72950 8246a6fde9ed581ac15ae33d8af8505e 563 Gene3D G3DSA:3.30.413.10 162 338 1.6E-119 T 14-10-2018 AMIS_72950 8246a6fde9ed581ac15ae33d8af8505e 563 SUPERFAMILY SSF55124 336 411 9.32E-18 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMIS_72950 8246a6fde9ed581ac15ae33d8af8505e 563 PRINTS PR00397 Sirohaem Fe-binding site signature 465 483 1.4E-9 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMIS_72950 8246a6fde9ed581ac15ae33d8af8505e 563 PRINTS PR00397 Sirohaem Fe-binding site signature 420 438 1.4E-9 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMIS_72950 8246a6fde9ed581ac15ae33d8af8505e 563 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 420 543 7.4E-9 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMIS_72950 8246a6fde9ed581ac15ae33d8af8505e 563 SUPERFAMILY SSF56014 417 563 2.09E-34 T 14-10-2018 AMIS_72950 8246a6fde9ed581ac15ae33d8af8505e 563 Gene3D G3DSA:3.30.413.10 416 563 3.9E-36 T 14-10-2018 AMIS_72950 8246a6fde9ed581ac15ae33d8af8505e 563 SUPERFAMILY SSF55124 19 169 1.01E-39 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMIS_72950 8246a6fde9ed581ac15ae33d8af8505e 563 SUPERFAMILY SSF56014 170 327 1.57E-44 T 14-10-2018 AMIS_72950 8246a6fde9ed581ac15ae33d8af8505e 563 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 99 160 8.0E-18 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMIS_72950 8246a6fde9ed581ac15ae33d8af8505e 563 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 343 406 3.9E-12 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMIS_72950 8246a6fde9ed581ac15ae33d8af8505e 563 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 465 481 - T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMIS_72950 8246a6fde9ed581ac15ae33d8af8505e 563 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 170 321 1.9E-36 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMIS_52320 ac15bbce26ee4d8f311eae4232e3292a 314 Pfam PF13424 Tetratricopeptide repeat 189 253 1.8E-7 T 14-10-2018 AMIS_52320 ac15bbce26ee4d8f311eae4232e3292a 314 SUPERFAMILY SSF48452 147 270 3.51E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_52320 ac15bbce26ee4d8f311eae4232e3292a 314 Gene3D G3DSA:1.25.40.10 116 274 1.7E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_51380 b1954ef81c667123e06f22bb0956d59a 596 SMART SM00220 16 270 5.5E-46 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMIS_51380 b1954ef81c667123e06f22bb0956d59a 596 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 134 146 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 AMIS_51380 b1954ef81c667123e06f22bb0956d59a 596 Gene3D G3DSA:3.30.200.20 6 94 1.8E-19 T 14-10-2018 AMIS_51380 b1954ef81c667123e06f22bb0956d59a 596 Gene3D G3DSA:1.10.510.10 95 276 5.1E-43 T 14-10-2018 AMIS_51380 b1954ef81c667123e06f22bb0956d59a 596 Pfam PF00069 Protein kinase domain 16 265 5.6E-43 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMIS_51380 b1954ef81c667123e06f22bb0956d59a 596 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 22 44 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 AMIS_51380 b1954ef81c667123e06f22bb0956d59a 596 SUPERFAMILY SSF56112 13 299 8.65E-66 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMIS_6180 c541f05c547c457cf5a14fc2ccd674bd 179 SUPERFAMILY SSF56053 1 82 8.11E-26 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_6180 c541f05c547c457cf5a14fc2ccd674bd 179 PRINTS PR00059 Ribosomal protein L6 signature 99 115 1.1E-32 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMIS_6180 c541f05c547c457cf5a14fc2ccd674bd 179 PRINTS PR00059 Ribosomal protein L6 signature 71 96 1.1E-32 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMIS_6180 c541f05c547c457cf5a14fc2ccd674bd 179 PRINTS PR00059 Ribosomal protein L6 signature 141 162 1.1E-32 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMIS_6180 c541f05c547c457cf5a14fc2ccd674bd 179 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 14-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_6180 c541f05c547c457cf5a14fc2ccd674bd 179 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 37.873 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMIS_6180 c541f05c547c457cf5a14fc2ccd674bd 179 PIRSF PIRSF002162 1 177 3.1E-47 T 14-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_6180 c541f05c547c457cf5a14fc2ccd674bd 179 Pfam PF00347 Ribosomal protein L6 91 164 7.7E-20 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_6180 c541f05c547c457cf5a14fc2ccd674bd 179 Pfam PF00347 Ribosomal protein L6 11 82 1.2E-19 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_6180 c541f05c547c457cf5a14fc2ccd674bd 179 SUPERFAMILY SSF56053 83 176 1.96E-35 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_6180 c541f05c547c457cf5a14fc2ccd674bd 179 Gene3D G3DSA:3.90.930.12 1 82 5.1E-31 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_6180 c541f05c547c457cf5a14fc2ccd674bd 179 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 5.1E-75 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMIS_6180 c541f05c547c457cf5a14fc2ccd674bd 179 Gene3D G3DSA:3.90.930.12 83 179 2.3E-40 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_12500 f96f56487798f3db9c9a79c00061bf6a 1045 Pfam PF01935 Domain of unknown function DUF87 643 738 2.6E-7 T 14-10-2018 IPR002789 Helicase HerA, central domain AMIS_12500 f96f56487798f3db9c9a79c00061bf6a 1045 Gene3D G3DSA:3.40.50.300 632 817 3.4E-10 T 14-10-2018 AMIS_12500 f96f56487798f3db9c9a79c00061bf6a 1045 Gene3D G3DSA:3.40.50.300 862 1029 1.3E-15 T 14-10-2018 AMIS_12500 f96f56487798f3db9c9a79c00061bf6a 1045 SUPERFAMILY SSF52540 53 284 2.15E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_12500 f96f56487798f3db9c9a79c00061bf6a 1045 SMART SM00382 660 987 3.8E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_12500 f96f56487798f3db9c9a79c00061bf6a 1045 SUPERFAMILY SSF52540 624 1016 3.64E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_43710 3d6a6bfd055e95fda9e36fcf88430d40 1069 SUPERFAMILY SSF49785 933 1055 2.27E-17 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_43710 3d6a6bfd055e95fda9e36fcf88430d40 1069 Pfam PF17132 alpha-L-rhamnosidase 476 849 7.5E-10 T 14-10-2018 IPR033400 Alpha-L-rhamnosidase RhaM AMIS_43710 3d6a6bfd055e95fda9e36fcf88430d40 1069 Gene3D G3DSA:2.60.120.560 166 308 6.7E-16 T 14-10-2018 AMIS_43710 3d6a6bfd055e95fda9e36fcf88430d40 1069 Gene3D G3DSA:3.40.50.880 645 840 4.6E-6 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_43710 3d6a6bfd055e95fda9e36fcf88430d40 1069 Gene3D G3DSA:2.60.120.260 924 1057 1.7E-16 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_15480 72d57c86e4b723973bd82a7895a40d33 295 Pfam PF03466 LysR substrate binding domain 71 272 5.1E-29 T 14-10-2018 IPR005119 LysR, substrate-binding AMIS_15480 72d57c86e4b723973bd82a7895a40d33 295 SUPERFAMILY SSF46785 3 94 3.61E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_15480 72d57c86e4b723973bd82a7895a40d33 295 Gene3D G3DSA:3.40.190.10 152 246 9.0E-32 T 14-10-2018 AMIS_15480 72d57c86e4b723973bd82a7895a40d33 295 Gene3D G3DSA:1.10.10.10 1 75 7.9E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_15480 72d57c86e4b723973bd82a7895a40d33 295 Gene3D G3DSA:3.40.190.10 76 260 9.0E-32 T 14-10-2018 AMIS_15480 72d57c86e4b723973bd82a7895a40d33 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 45 2.2E-12 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_15480 72d57c86e4b723973bd82a7895a40d33 295 SUPERFAMILY SSF53850 72 277 2.17E-27 T 14-10-2018 AMIS_68710 d07de6c4b5d0d896c27306649384672b 786 SUPERFAMILY SSF47226 3 128 2.49E-29 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMIS_68710 d07de6c4b5d0d896c27306649384672b 786 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 508 647 4.4E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_68710 d07de6c4b5d0d896c27306649384672b 786 Gene3D G3DSA:1.10.287.560 393 460 6.0E-10 T 14-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 AMIS_68710 d07de6c4b5d0d896c27306649384672b 786 SMART SM01231 392 460 3.5E-13 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AMIS_68710 d07de6c4b5d0d896c27306649384672b 786 Pfam PF01627 Hpt domain 4 96 5.7E-17 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AMIS_68710 d07de6c4b5d0d896c27306649384672b 786 PRINTS PR00344 Bacterial sensor protein C-terminal signature 592 602 6.4E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_68710 d07de6c4b5d0d896c27306649384672b 786 PRINTS PR00344 Bacterial sensor protein C-terminal signature 550 564 6.4E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_68710 d07de6c4b5d0d896c27306649384672b 786 PRINTS PR00344 Bacterial sensor protein C-terminal signature 608 626 6.4E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_68710 d07de6c4b5d0d896c27306649384672b 786 PRINTS PR00344 Bacterial sensor protein C-terminal signature 632 645 6.4E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_68710 d07de6c4b5d0d896c27306649384672b 786 SUPERFAMILY SSF55874 463 646 1.57E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_68710 d07de6c4b5d0d896c27306649384672b 786 SMART SM00387 505 648 1.8E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_68710 d07de6c4b5d0d896c27306649384672b 786 SMART SM00260 640 779 5.1E-23 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMIS_68710 d07de6c4b5d0d896c27306649384672b 786 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 393 459 4.5E-15 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AMIS_68710 d07de6c4b5d0d896c27306649384672b 786 Pfam PF01584 CheW-like domain 652 780 2.0E-20 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMIS_68710 d07de6c4b5d0d896c27306649384672b 786 Gene3D G3DSA:1.20.120.160 1 138 5.5E-35 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMIS_68710 d07de6c4b5d0d896c27306649384672b 786 SMART SM00073 1 98 3.4E-26 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AMIS_68710 d07de6c4b5d0d896c27306649384672b 786 SUPERFAMILY SSF50341 647 778 2.22E-27 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 AMIS_68710 d07de6c4b5d0d896c27306649384672b 786 Gene3D G3DSA:3.30.565.10 461 647 2.1E-50 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_68710 d07de6c4b5d0d896c27306649384672b 786 SUPERFAMILY SSF47384 393 461 2.51E-10 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_68710 d07de6c4b5d0d896c27306649384672b 786 Gene3D G3DSA:2.40.50.180 671 734 1.9E-26 T 14-10-2018 AMIS_68710 d07de6c4b5d0d896c27306649384672b 786 Gene3D G3DSA:2.30.30.40 648 774 1.9E-26 T 14-10-2018 AMIS_19400 0dff5a1fb75210984614202500f69a87 383 PIRSF PIRSF000429 1 375 8.3E-21 T 14-10-2018 IPR002155 Thiolase GO:0016747 AMIS_19400 0dff5a1fb75210984614202500f69a87 383 Gene3D G3DSA:3.40.47.10 1 381 3.6E-83 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_19400 0dff5a1fb75210984614202500f69a87 383 SUPERFAMILY SSF53901 230 369 2.52E-17 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_19400 0dff5a1fb75210984614202500f69a87 383 SUPERFAMILY SSF53901 5 224 2.1E-25 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_42130 d4af9867d30f88d3fd5251f37a72dd51 210 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 3 39 8.1E-12 T 14-10-2018 IPR019933 DivIVA domain AMIS_42130 d4af9867d30f88d3fd5251f37a72dd51 210 Pfam PF05103 DivIVA protein 3 84 1.5E-12 T 14-10-2018 IPR007793 DivIVA family AMIS_51910 507f30150cdf0079a9b9482c572f37aa 649 SMART SM00327 460 638 1.0E-5 T 14-10-2018 IPR002035 von Willebrand factor, type A AMIS_51910 507f30150cdf0079a9b9482c572f37aa 649 SUPERFAMILY SSF53300 462 635 3.41E-16 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMIS_51910 507f30150cdf0079a9b9482c572f37aa 649 Gene3D G3DSA:3.40.50.410 456 640 4.7E-16 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMIS_33970 7a36efac50e3a886c705ab0c37c302b6 359 Gene3D G3DSA:3.40.50.450 52 337 7.5E-70 T 14-10-2018 AMIS_33970 7a36efac50e3a886c705ab0c37c302b6 359 SUPERFAMILY SSF102405 134 333 1.83E-35 T 14-10-2018 AMIS_33970 7a36efac50e3a886c705ab0c37c302b6 359 Pfam PF02481 DNA recombination-mediator protein A 125 306 2.1E-64 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 AMIS_11740 5c10432d5fe73c220d6b647b43699237 340 SUPERFAMILY SSF55781 72 339 9.02E-55 T 14-10-2018 AMIS_11740 5c10432d5fe73c220d6b647b43699237 340 Gene3D G3DSA:3.30.390.60 128 229 6.0E-40 T 14-10-2018 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily AMIS_11740 5c10432d5fe73c220d6b647b43699237 340 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 4 336 4.4E-94 T 14-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 AMIS_11740 5c10432d5fe73c220d6b647b43699237 340 PIRSF PIRSF005485 1 340 6.0E-102 T 14-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 AMIS_11740 5c10432d5fe73c220d6b647b43699237 340 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 2 330 27.759 T 14-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 AMIS_11740 5c10432d5fe73c220d6b647b43699237 340 Pfam PF01628 HrcA protein C terminal domain 104 323 4.4E-60 T 14-10-2018 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 AMIS_11740 5c10432d5fe73c220d6b647b43699237 340 Gene3D G3DSA:3.30.450.40 105 331 6.0E-40 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_11740 5c10432d5fe73c220d6b647b43699237 340 Pfam PF08220 DeoR-like helix-turn-helix domain 28 61 5.3E-5 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AMIS_11740 5c10432d5fe73c220d6b647b43699237 340 Gene3D G3DSA:1.10.10.10 1 85 2.6E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_11740 5c10432d5fe73c220d6b647b43699237 340 SUPERFAMILY SSF46785 3 83 1.31E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_57960 31632800b426f7358266b510c4b8c08f 505 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 265 455 5.9E-68 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AMIS_57960 31632800b426f7358266b510c4b8c08f 505 Gene3D G3DSA:3.30.420.40 258 505 3.0E-95 T 14-10-2018 AMIS_57960 31632800b426f7358266b510c4b8c08f 505 SUPERFAMILY SSF53067 4 259 9.26E-88 T 14-10-2018 AMIS_57960 31632800b426f7358266b510c4b8c08f 505 SUPERFAMILY SSF53067 259 502 3.73E-84 T 14-10-2018 AMIS_57960 31632800b426f7358266b510c4b8c08f 505 Hamap MF_00186 Glycerol kinase [glpK]. 2 502 54.934 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 AMIS_57960 31632800b426f7358266b510c4b8c08f 505 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 256 4.2E-74 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AMIS_57960 31632800b426f7358266b510c4b8c08f 505 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 4 501 2.7E-224 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 AMIS_57960 31632800b426f7358266b510c4b8c08f 505 PIRSF PIRSF000538 3 505 1.5E-161 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AMIS_57960 31632800b426f7358266b510c4b8c08f 505 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 367 387 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AMIS_57960 31632800b426f7358266b510c4b8c08f 505 Gene3D G3DSA:3.30.420.40 2 257 3.3E-103 T 14-10-2018 AMIS_57960 31632800b426f7358266b510c4b8c08f 505 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 134 146 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AMIS_39280 31dd9f167f26e45538dc62abecd7ebdc 913 SMART SM00421 851 908 3.1E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_39280 31dd9f167f26e45538dc62abecd7ebdc 913 Pfam PF13191 AAA ATPase domain 2 155 6.5E-15 T 14-10-2018 AMIS_39280 31dd9f167f26e45538dc62abecd7ebdc 913 Gene3D G3DSA:3.40.50.300 1 151 1.5E-5 T 14-10-2018 AMIS_39280 31dd9f167f26e45538dc62abecd7ebdc 913 ProSitePatterns PS00622 LuxR-type HTH domain signature. 868 895 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_39280 31dd9f167f26e45538dc62abecd7ebdc 913 SUPERFAMILY SSF46894 847 905 2.65E-16 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_39280 31dd9f167f26e45538dc62abecd7ebdc 913 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 868 884 2.3E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_39280 31dd9f167f26e45538dc62abecd7ebdc 913 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 854 868 2.3E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_39280 31dd9f167f26e45538dc62abecd7ebdc 913 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 884 896 2.3E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_39280 31dd9f167f26e45538dc62abecd7ebdc 913 SUPERFAMILY SSF52540 1 224 2.99E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_39280 31dd9f167f26e45538dc62abecd7ebdc 913 Pfam PF00196 Bacterial regulatory proteins, luxR family 853 905 2.9E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_39280 31dd9f167f26e45538dc62abecd7ebdc 913 Gene3D G3DSA:1.10.10.10 800 912 2.7E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_39280 31dd9f167f26e45538dc62abecd7ebdc 913 SUPERFAMILY SSF48452 560 753 8.54E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_53110 b14385ca7be63a441d783c8bbe20d4ac 443 SUPERFAMILY SSF52540 16 420 4.41E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_53110 b14385ca7be63a441d783c8bbe20d4ac 443 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 36 385 1.2E-25 T 14-10-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 AMIS_53110 b14385ca7be63a441d783c8bbe20d4ac 443 Gene3D G3DSA:3.40.50.300 222 419 1.5E-21 T 14-10-2018 AMIS_26490 81b2fb4e542358b6ae4f7a023b2cd783 327 Gene3D G3DSA:3.60.60.10 92 296 1.7E-18 T 14-10-2018 AMIS_26490 81b2fb4e542358b6ae4f7a023b2cd783 327 Pfam PF03417 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase 100 292 3.1E-24 T 14-10-2018 IPR005079 Peptidase C45 AMIS_26490 81b2fb4e542358b6ae4f7a023b2cd783 327 SUPERFAMILY SSF56235 125 194 1.85E-6 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMIS_37280 83e3e087706cab0201ffc95b0c3c042b 298 Gene3D G3DSA:1.10.3720.10 47 298 2.5E-67 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_37280 83e3e087706cab0201ffc95b0c3c042b 298 SUPERFAMILY SSF160964 12 42 5.62E-5 T 14-10-2018 AMIS_37280 83e3e087706cab0201ffc95b0c3c042b 298 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 97 290 3.7E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_37280 83e3e087706cab0201ffc95b0c3c042b 298 SUPERFAMILY SSF161098 51 285 6.41E-54 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_64850 7371530c49a423fa040b4ac40aeff622 268 SUPERFAMILY SSF161098 3 268 9.81E-50 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_64850 7371530c49a423fa040b4ac40aeff622 268 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 79 256 1.2E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_64850 7371530c49a423fa040b4ac40aeff622 268 Gene3D G3DSA:1.10.3720.10 1 259 3.3E-50 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_24890 ab201d3070e653edd33eea258fa21372 263 Gene3D G3DSA:3.40.190.10 48 260 7.1E-59 T 14-10-2018 AMIS_24890 ab201d3070e653edd33eea258fa21372 263 Gene3D G3DSA:3.40.190.10 121 223 7.1E-59 T 14-10-2018 AMIS_24890 ab201d3070e653edd33eea258fa21372 263 SUPERFAMILY SSF53850 46 262 4.7E-53 T 14-10-2018 AMIS_24890 ab201d3070e653edd33eea258fa21372 263 Pfam PF13531 Bacterial extracellular solute-binding protein 47 261 1.9E-40 T 14-10-2018 AMIS_24890 ab201d3070e653edd33eea258fa21372 263 PIRSF PIRSF004846 4 263 7.9E-65 T 14-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 AMIS_24890 ab201d3070e653edd33eea258fa21372 263 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 52 257 6.9E-40 T 14-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 AMIS_60670 3dbd93ac5dd70d07133908f49cfd65d2 572 Gene3D G3DSA:3.40.50.300 325 571 1.1E-77 T 14-10-2018 AMIS_60670 3dbd93ac5dd70d07133908f49cfd65d2 572 SUPERFAMILY SSF52540 330 566 3.7E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_60670 3dbd93ac5dd70d07133908f49cfd65d2 572 Pfam PF00664 ABC transporter transmembrane region 20 285 2.4E-35 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AMIS_60670 3dbd93ac5dd70d07133908f49cfd65d2 572 Gene3D G3DSA:1.20.1560.10 1 319 3.5E-62 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMIS_60670 3dbd93ac5dd70d07133908f49cfd65d2 572 ProSitePatterns PS00211 ABC transporters family signature. 471 485 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_60670 3dbd93ac5dd70d07133908f49cfd65d2 572 SUPERFAMILY SSF90123 5 317 7.98E-60 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMIS_60670 3dbd93ac5dd70d07133908f49cfd65d2 572 SMART SM00382 358 545 3.3E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_60670 3dbd93ac5dd70d07133908f49cfd65d2 572 Pfam PF00005 ABC transporter 349 499 4.0E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_79840 e5ac883bf87db6faa5cf07fc6ab534d6 434 Gene3D G3DSA:2.160.20.80 227 342 2.5E-9 T 14-10-2018 AMIS_79840 e5ac883bf87db6faa5cf07fc6ab534d6 434 Pfam PF13576 Pentapeptide repeats (9 copies) 251 297 1.3E-6 T 14-10-2018 IPR001646 Pentapeptide repeat AMIS_79840 e5ac883bf87db6faa5cf07fc6ab534d6 434 SUPERFAMILY SSF141571 229 338 1.14E-7 T 14-10-2018 AMIS_21840 76cf134136ce93e34ef7295cf6813275 211 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 71 1.2E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_21840 76cf134136ce93e34ef7295cf6813275 211 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 8.8E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_21840 76cf134136ce93e34ef7295cf6813275 211 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 8.8E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_21840 76cf134136ce93e34ef7295cf6813275 211 SUPERFAMILY SSF48008 77 203 3.14E-13 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AMIS_21840 76cf134136ce93e34ef7295cf6813275 211 Gene3D G3DSA:1.20.120.530 76 208 2.4E-15 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AMIS_21840 76cf134136ce93e34ef7295cf6813275 211 SMART SM00895 81 204 2.8E-4 T 14-10-2018 IPR011711 GntR, C-terminal AMIS_21840 76cf134136ce93e34ef7295cf6813275 211 SUPERFAMILY SSF46785 7 75 6.03E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_21840 76cf134136ce93e34ef7295cf6813275 211 SMART SM00345 13 71 5.3E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_21840 76cf134136ce93e34ef7295cf6813275 211 Gene3D G3DSA:1.10.10.10 7 73 3.1E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_21840 76cf134136ce93e34ef7295cf6813275 211 Pfam PF07729 FCD domain 87 197 3.9E-15 T 14-10-2018 IPR011711 GntR, C-terminal AMIS_37540 5829e13ed8c5de9db59a8382f5c1a523 263 Gene3D G3DSA:3.40.190.80 164 257 4.5E-12 T 14-10-2018 AMIS_37540 5829e13ed8c5de9db59a8382f5c1a523 263 Pfam PF00459 Inositol monophosphatase family 7 251 1.1E-33 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMIS_37540 5829e13ed8c5de9db59a8382f5c1a523 263 SUPERFAMILY SSF56655 5 259 1.31E-46 T 14-10-2018 AMIS_37540 5829e13ed8c5de9db59a8382f5c1a523 263 Gene3D G3DSA:3.30.540.10 3 133 1.2E-28 T 14-10-2018 AMIS_37540 5829e13ed8c5de9db59a8382f5c1a523 263 PRINTS PR00377 Inositol monophosphatase superfamily signature 80 96 5.9E-13 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMIS_37540 5829e13ed8c5de9db59a8382f5c1a523 263 PRINTS PR00377 Inositol monophosphatase superfamily signature 37 57 5.9E-13 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMIS_37540 5829e13ed8c5de9db59a8382f5c1a523 263 PRINTS PR00377 Inositol monophosphatase superfamily signature 59 75 5.9E-13 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMIS_37540 5829e13ed8c5de9db59a8382f5c1a523 263 PRINTS PR00377 Inositol monophosphatase superfamily signature 205 229 5.9E-13 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMIS_3310 fbf0f692aba74676d5d906e03e84d4c2 209 SUPERFAMILY SSF46689 18 89 3.9E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_3310 fbf0f692aba74676d5d906e03e84d4c2 209 Pfam PF00440 Bacterial regulatory proteins, tetR family 28 73 1.4E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_3310 fbf0f692aba74676d5d906e03e84d4c2 209 Gene3D G3DSA:1.10.357.10 22 209 5.6E-58 T 14-10-2018 AMIS_3310 fbf0f692aba74676d5d906e03e84d4c2 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 48 71 1.8E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_3310 fbf0f692aba74676d5d906e03e84d4c2 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 27 40 1.8E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_3310 fbf0f692aba74676d5d906e03e84d4c2 209 ProSitePatterns PS01081 TetR-type HTH domain signature. 39 70 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMIS_34430 381737d948412b2503c7b785f2826331 433 SUPERFAMILY SSF75304 8 424 6.67E-81 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMIS_34430 381737d948412b2503c7b785f2826331 433 Gene3D G3DSA:3.90.1300.10 12 427 2.5E-87 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMIS_34430 381737d948412b2503c7b785f2826331 433 Pfam PF01425 Amidase 32 281 7.5E-66 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMIS_1950 2f3f10c3cad7e6009556bf3bc02a8b67 168 Pfam PF08281 Sigma-70, region 4 100 153 8.8E-16 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_1950 2f3f10c3cad7e6009556bf3bc02a8b67 168 SUPERFAMILY SSF88946 4 89 1.26E-8 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_1950 2f3f10c3cad7e6009556bf3bc02a8b67 168 SUPERFAMILY SSF88659 96 157 2.99E-16 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_1950 2f3f10c3cad7e6009556bf3bc02a8b67 168 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 8 155 2.1E-18 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_1950 2f3f10c3cad7e6009556bf3bc02a8b67 168 TIGRFAM TIGR02983 SigE-fam_strep: RNA polymerase sigma-70 factor, sigma-E family 2 157 7.7E-45 T 14-10-2018 IPR014325 RNA polymerase sigma-E factor, actinobacteria GO:0016987 AMIS_1950 2f3f10c3cad7e6009556bf3bc02a8b67 168 Gene3D G3DSA:1.10.10.10 75 160 4.1E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_41270 0c1ae9ab6c0344dfc34519ade250f75d 294 SUPERFAMILY SSF52540 4 216 2.51E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_41270 0c1ae9ab6c0344dfc34519ade250f75d 294 Gene3D G3DSA:3.40.50.300 1 227 9.6E-62 T 14-10-2018 AMIS_41270 0c1ae9ab6c0344dfc34519ade250f75d 294 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_41270 0c1ae9ab6c0344dfc34519ade250f75d 294 Pfam PF00005 ABC transporter 21 156 1.3E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_41270 0c1ae9ab6c0344dfc34519ade250f75d 294 SMART SM00382 28 205 1.7E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_23150 a5b2f258a293e3392153acabb10245a4 528 SUPERFAMILY SSF52540 5 228 1.12E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_23150 a5b2f258a293e3392153acabb10245a4 528 SUPERFAMILY SSF52540 329 524 8.04E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_23150 a5b2f258a293e3392153acabb10245a4 528 Gene3D G3DSA:3.40.50.300 3 268 4.5E-58 T 14-10-2018 AMIS_23150 a5b2f258a293e3392153acabb10245a4 528 Pfam PF00005 ABC transporter 357 475 4.8E-10 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_23150 a5b2f258a293e3392153acabb10245a4 528 Gene3D G3DSA:3.40.50.300 338 526 3.1E-37 T 14-10-2018 AMIS_23150 a5b2f258a293e3392153acabb10245a4 528 Pfam PF00005 ABC transporter 23 171 1.5E-19 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_23150 a5b2f258a293e3392153acabb10245a4 528 SMART SM00382 30 215 4.6E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_23150 a5b2f258a293e3392153acabb10245a4 528 SMART SM00382 365 528 8.7E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_23150 a5b2f258a293e3392153acabb10245a4 528 Pfam PF12848 ABC transporter 210 271 1.6E-5 T 14-10-2018 IPR032781 ABC-transporter extension domain AMIS_58710 8221592127941052270e2c40ebb1d16c 233 SUPERFAMILY SSF56784 11 231 1.09E-33 T 14-10-2018 IPR036412 HAD-like superfamily AMIS_58710 8221592127941052270e2c40ebb1d16c 233 Gene3D G3DSA:3.40.50.1000 84 231 1.2E-30 T 14-10-2018 IPR023214 HAD superfamily AMIS_58710 8221592127941052270e2c40ebb1d16c 233 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 203 9.2E-15 T 14-10-2018 AMIS_65280 56f6b32bba8c21840a4f239f672fcdd2 1052 Pfam PF00486 Transcriptional regulatory protein, C terminal 37 100 7.7E-9 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_65280 56f6b32bba8c21840a4f239f672fcdd2 1052 SUPERFAMILY SSF46894 16 100 3.68E-13 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_65280 56f6b32bba8c21840a4f239f672fcdd2 1052 Gene3D G3DSA:1.25.40.10 904 1041 4.1E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_65280 56f6b32bba8c21840a4f239f672fcdd2 1052 Gene3D G3DSA:1.25.40.10 718 903 2.1E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_65280 56f6b32bba8c21840a4f239f672fcdd2 1052 Gene3D G3DSA:1.25.40.10 105 283 8.3E-46 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_65280 56f6b32bba8c21840a4f239f672fcdd2 1052 SUPERFAMILY SSF52540 282 536 7.0E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_65280 56f6b32bba8c21840a4f239f672fcdd2 1052 SUPERFAMILY SSF48452 854 996 9.21E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_65280 56f6b32bba8c21840a4f239f672fcdd2 1052 Pfam PF03704 Bacterial transcriptional activator domain 107 250 2.5E-39 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain AMIS_65280 56f6b32bba8c21840a4f239f672fcdd2 1052 Gene3D G3DSA:1.10.10.10 8 103 2.6E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_65280 56f6b32bba8c21840a4f239f672fcdd2 1052 Pfam PF13191 AAA ATPase domain 286 454 2.6E-25 T 14-10-2018 AMIS_65280 56f6b32bba8c21840a4f239f672fcdd2 1052 SMART SM00862 29 100 1.5E-11 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_65280 56f6b32bba8c21840a4f239f672fcdd2 1052 SUPERFAMILY SSF48452 206 1001 5.92E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_65280 56f6b32bba8c21840a4f239f672fcdd2 1052 SMART SM01043 107 251 1.5E-43 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain AMIS_65280 56f6b32bba8c21840a4f239f672fcdd2 1052 SUPERFAMILY SSF48452 104 270 9.05E-34 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_75900 b904fad5ede449da43d2cb76c7b669f2 363 SUPERFAMILY SSF51735 8 315 1.44E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_75900 b904fad5ede449da43d2cb76c7b669f2 363 Pfam PF01370 NAD dependent epimerase/dehydratase family 9 238 1.1E-17 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AMIS_75900 b904fad5ede449da43d2cb76c7b669f2 363 Gene3D G3DSA:3.40.50.720 9 351 5.0E-31 T 14-10-2018 AMIS_55300 a448b4f8482569d1fcdff329b12807e0 357 Gene3D G3DSA:3.10.20.30 267 357 1.1E-11 T 14-10-2018 IPR012675 Beta-grasp domain superfamily AMIS_55300 a448b4f8482569d1fcdff329b12807e0 357 SUPERFAMILY SSF52343 133 264 4.19E-23 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMIS_55300 a448b4f8482569d1fcdff329b12807e0 357 SUPERFAMILY SSF54292 252 356 2.16E-18 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AMIS_55300 a448b4f8482569d1fcdff329b12807e0 357 Pfam PF00175 Oxidoreductase NAD-binding domain 149 241 1.8E-6 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AMIS_55300 a448b4f8482569d1fcdff329b12807e0 357 SUPERFAMILY SSF63380 39 139 9.89E-21 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AMIS_55300 a448b4f8482569d1fcdff329b12807e0 357 Gene3D G3DSA:2.40.30.10 38 138 4.5E-19 T 14-10-2018 AMIS_55300 a448b4f8482569d1fcdff329b12807e0 357 Pfam PF00970 Oxidoreductase FAD-binding domain 68 137 2.0E-8 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 AMIS_55300 a448b4f8482569d1fcdff329b12807e0 357 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 277 347 3.9E-5 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AMIS_55300 a448b4f8482569d1fcdff329b12807e0 357 Gene3D G3DSA:3.40.50.80 141 266 4.4E-23 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMIS_71390 a7a70b334756c8e77c408edc0d7fe420 755 SUPERFAMILY SSF50249 319 403 8.91E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMIS_71390 a7a70b334756c8e77c408edc0d7fe420 755 Gene3D G3DSA:2.20.70.80 393 432 5.6E-6 T 14-10-2018 AMIS_71390 a7a70b334756c8e77c408edc0d7fe420 755 SMART SM00292 668 745 8.8E-12 T 14-10-2018 IPR001357 BRCT domain AMIS_71390 a7a70b334756c8e77c408edc0d7fe420 755 PIRSF PIRSF001604 3 746 1.5E-227 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AMIS_71390 a7a70b334756c8e77c408edc0d7fe420 755 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 410 436 1.3E-5 T 14-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 AMIS_71390 a7a70b334756c8e77c408edc0d7fe420 755 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 668 737 2.4E-12 T 14-10-2018 IPR001357 BRCT domain AMIS_71390 a7a70b334756c8e77c408edc0d7fe420 755 Gene3D G3DSA:3.30.470.90 73 319 1.5E-100 T 14-10-2018 AMIS_71390 a7a70b334756c8e77c408edc0d7fe420 755 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 333 348 - T 14-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site AMIS_71390 a7a70b334756c8e77c408edc0d7fe420 755 Gene3D G3DSA:2.40.50.140 320 391 5.7E-28 T 14-10-2018 AMIS_71390 a7a70b334756c8e77c408edc0d7fe420 755 SMART SM00278 449 468 320.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AMIS_71390 a7a70b334756c8e77c408edc0d7fe420 755 SMART SM00278 620 639 4.4 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AMIS_71390 a7a70b334756c8e77c408edc0d7fe420 755 SMART SM00278 521 540 420.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AMIS_71390 a7a70b334756c8e77c408edc0d7fe420 755 SUPERFAMILY SSF56091 8 318 1.69E-113 T 14-10-2018 AMIS_71390 a7a70b334756c8e77c408edc0d7fe420 755 Hamap MF_01588 DNA ligase [ligA]. 7 742 49.856 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AMIS_71390 a7a70b334756c8e77c408edc0d7fe420 755 Gene3D G3DSA:1.10.287.610 2 72 9.4E-27 T 14-10-2018 AMIS_71390 a7a70b334756c8e77c408edc0d7fe420 755 SUPERFAMILY SSF47781 405 659 6.04E-40 T 14-10-2018 IPR010994 RuvA domain 2-like AMIS_71390 a7a70b334756c8e77c408edc0d7fe420 755 Gene3D G3DSA:1.10.150.20 435 513 4.2E-10 T 14-10-2018 AMIS_71390 a7a70b334756c8e77c408edc0d7fe420 755 Gene3D G3DSA:3.40.50.10190 668 746 3.4E-22 T 14-10-2018 IPR036420 BRCT domain superfamily AMIS_71390 a7a70b334756c8e77c408edc0d7fe420 755 SMART SM00532 8 451 2.5E-254 T 14-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 AMIS_71390 a7a70b334756c8e77c408edc0d7fe420 755 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 323 400 4.9E-31 T 14-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 AMIS_71390 a7a70b334756c8e77c408edc0d7fe420 755 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 16 737 1.4E-227 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AMIS_71390 a7a70b334756c8e77c408edc0d7fe420 755 SUPERFAMILY SSF52113 668 743 1.74E-16 T 14-10-2018 IPR036420 BRCT domain superfamily AMIS_71390 a7a70b334756c8e77c408edc0d7fe420 755 Gene3D G3DSA:1.10.150.20 604 661 2.0E-10 T 14-10-2018 AMIS_71390 a7a70b334756c8e77c408edc0d7fe420 755 Gene3D G3DSA:1.10.150.20 514 580 1.5E-9 T 14-10-2018 AMIS_71390 a7a70b334756c8e77c408edc0d7fe420 755 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 118 147 - T 14-10-2018 IPR018239 NAD-dependent DNA ligase, active site AMIS_71390 a7a70b334756c8e77c408edc0d7fe420 755 Pfam PF12826 Helix-hairpin-helix motif 519 549 8.6E-8 T 14-10-2018 AMIS_71390 a7a70b334756c8e77c408edc0d7fe420 755 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 9 320 4.9E-121 T 14-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 AMIS_32840 a289dc539c37545fd21952bda81de527 325 SUPERFAMILY SSF56645 1 124 2.36E-11 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMIS_32840 a289dc539c37545fd21952bda81de527 325 Gene3D G3DSA:1.10.540.10 1 99 1.2E-12 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMIS_32840 a289dc539c37545fd21952bda81de527 325 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 183 314 1.5E-28 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMIS_32840 a289dc539c37545fd21952bda81de527 325 SUPERFAMILY SSF47203 183 319 7.73E-36 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMIS_32840 a289dc539c37545fd21952bda81de527 325 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 87 3.6E-8 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMIS_32840 a289dc539c37545fd21952bda81de527 325 Gene3D G3DSA:1.20.140.10 181 324 5.0E-37 T 14-10-2018 AMIS_14390 fa1092e80ffe530173a420e3e0688449 537 SMART SM00387 430 522 2.3E-9 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_14390 fa1092e80ffe530173a420e3e0688449 537 SUPERFAMILY SSF55874 397 518 3.54E-18 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_14390 fa1092e80ffe530173a420e3e0688449 537 Pfam PF13492 GAF domain 185 309 1.5E-6 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_14390 fa1092e80ffe530173a420e3e0688449 537 Gene3D G3DSA:3.30.450.40 159 322 5.6E-9 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_14390 fa1092e80ffe530173a420e3e0688449 537 SUPERFAMILY SSF55781 183 321 1.28E-7 T 14-10-2018 AMIS_14390 fa1092e80ffe530173a420e3e0688449 537 Gene3D G3DSA:3.30.565.10 396 520 2.5E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_14390 fa1092e80ffe530173a420e3e0688449 537 Pfam PF07730 Histidine kinase 325 390 7.6E-14 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMIS_59130 28a80c8af1c78ab6e82ca9a0906efd8b 286 Gene3D G3DSA:3.30.70.20 17 227 1.0E-57 T 14-10-2018 AMIS_59130 28a80c8af1c78ab6e82ca9a0906efd8b 286 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 146 157 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMIS_59130 28a80c8af1c78ab6e82ca9a0906efd8b 286 Pfam PF13247 4Fe-4S dicluster domain 106 201 1.6E-23 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMIS_59130 28a80c8af1c78ab6e82ca9a0906efd8b 286 PIRSF PIRSF036298 18 284 1.8E-62 T 14-10-2018 IPR014603 Formate dehydrogenase iron-sulphur subunit GO:0015944|GO:0045333|GO:0051539 AMIS_59130 28a80c8af1c78ab6e82ca9a0906efd8b 286 SUPERFAMILY SSF54862 24 252 2.3E-57 T 14-10-2018 AMIS_39670 0bda791b1603ff887c934532ae7ddc9c 394 Pfam PF00480 ROK family 97 370 7.4E-31 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AMIS_39670 0bda791b1603ff887c934532ae7ddc9c 394 Gene3D G3DSA:1.10.10.10 24 91 7.1E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_39670 0bda791b1603ff887c934532ae7ddc9c 394 SUPERFAMILY SSF53067 96 378 9.02E-29 T 14-10-2018 AMIS_39670 0bda791b1603ff887c934532ae7ddc9c 394 SUPERFAMILY SSF46785 27 85 3.08E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_39670 0bda791b1603ff887c934532ae7ddc9c 394 Gene3D G3DSA:3.30.420.40 216 363 1.9E-50 T 14-10-2018 AMIS_39670 0bda791b1603ff887c934532ae7ddc9c 394 Gene3D G3DSA:3.30.420.40 105 215 1.9E-50 T 14-10-2018 AMIS_14860 e367279592d42b44e7d85dfe2930ad4b 210 Gene3D G3DSA:1.20.1300.10 1 210 4.7E-44 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMIS_14860 e367279592d42b44e7d85dfe2930ad4b 210 TIGRFAM TIGR02046 sdhC_b558_fam: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family 1 209 1.1E-54 T 14-10-2018 IPR011138 Succinate dehydrogenase cytochrome b558 subunit AMIS_14860 e367279592d42b44e7d85dfe2930ad4b 210 SUPERFAMILY SSF81343 1 209 3.92E-42 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMIS_79340 4551c0595e1fc931a54e17fc7fabe86a 149 SUPERFAMILY SSF55961 14 146 1.24E-22 T 14-10-2018 AMIS_79340 4551c0595e1fc931a54e17fc7fabe86a 149 Gene3D G3DSA:3.30.530.20 1 146 1.6E-26 T 14-10-2018 IPR023393 START-like domain superfamily AMIS_79340 4551c0595e1fc931a54e17fc7fabe86a 149 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 13 145 2.0E-14 T 14-10-2018 IPR019587 Polyketide cyclase/dehydrase AMIS_80520 58e3757591b666c89cfeb3583ffaba9b 420 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 218 393 2.1E-27 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMIS_80520 58e3757591b666c89cfeb3583ffaba9b 420 Gene3D G3DSA:1.10.287.40 1 103 1.1E-19 T 14-10-2018 AMIS_80520 58e3757591b666c89cfeb3583ffaba9b 420 SUPERFAMILY SSF55681 116 412 1.87E-85 T 14-10-2018 AMIS_80520 58e3757591b666c89cfeb3583ffaba9b 420 SUPERFAMILY SSF46589 2 111 1.94E-22 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 AMIS_80520 58e3757591b666c89cfeb3583ffaba9b 420 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 106 8.6E-23 T 14-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 AMIS_80520 58e3757591b666c89cfeb3583ffaba9b 420 Gene3D G3DSA:3.30.930.10 104 420 1.5E-115 T 14-10-2018 AMIS_80520 58e3757591b666c89cfeb3583ffaba9b 420 PRINTS PR00981 Seryl-tRNA synthetase signature 271 284 3.6E-31 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AMIS_80520 58e3757591b666c89cfeb3583ffaba9b 420 PRINTS PR00981 Seryl-tRNA synthetase signature 346 362 3.6E-31 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AMIS_80520 58e3757591b666c89cfeb3583ffaba9b 420 PRINTS PR00981 Seryl-tRNA synthetase signature 259 271 3.6E-31 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AMIS_80520 58e3757591b666c89cfeb3583ffaba9b 420 PRINTS PR00981 Seryl-tRNA synthetase signature 311 324 3.6E-31 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AMIS_80520 58e3757591b666c89cfeb3583ffaba9b 420 PRINTS PR00981 Seryl-tRNA synthetase signature 328 344 3.6E-31 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AMIS_80520 58e3757591b666c89cfeb3583ffaba9b 420 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 415 38.25 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AMIS_80520 58e3757591b666c89cfeb3583ffaba9b 420 PIRSF PIRSF001529 1 419 2.9E-134 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AMIS_80520 58e3757591b666c89cfeb3583ffaba9b 420 TIGRFAM TIGR00414 serS: serine--tRNA ligase 2 410 7.4E-126 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AMIS_74930 93c408cfe04d7be7cdb9f64cb9948615 376 Pfam PF00288 GHMP kinases N terminal domain 106 171 4.9E-16 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 AMIS_74930 93c408cfe04d7be7cdb9f64cb9948615 376 PRINTS PR00473 Galactokinase signature 23 41 1.4E-23 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AMIS_74930 93c408cfe04d7be7cdb9f64cb9948615 376 PRINTS PR00473 Galactokinase signature 84 95 1.4E-23 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AMIS_74930 93c408cfe04d7be7cdb9f64cb9948615 376 PRINTS PR00473 Galactokinase signature 104 122 1.4E-23 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AMIS_74930 93c408cfe04d7be7cdb9f64cb9948615 376 PRINTS PR00473 Galactokinase signature 259 273 1.4E-23 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AMIS_74930 93c408cfe04d7be7cdb9f64cb9948615 376 Pfam PF08544 GHMP kinases C terminal 276 354 9.0E-12 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain AMIS_74930 93c408cfe04d7be7cdb9f64cb9948615 376 TIGRFAM TIGR00131 gal_kin: galactokinase 2 374 2.2E-92 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AMIS_74930 93c408cfe04d7be7cdb9f64cb9948615 376 Pfam PF10509 Galactokinase galactose-binding signature 7 54 1.0E-22 T 14-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AMIS_74930 93c408cfe04d7be7cdb9f64cb9948615 376 SUPERFAMILY SSF55060 199 375 1.98E-50 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily AMIS_74930 93c408cfe04d7be7cdb9f64cb9948615 376 PRINTS PR00959 Mevalonate kinase family signature 21 45 3.3E-40 T 14-10-2018 AMIS_74930 93c408cfe04d7be7cdb9f64cb9948615 376 PRINTS PR00959 Mevalonate kinase family signature 111 133 3.3E-40 T 14-10-2018 AMIS_74930 93c408cfe04d7be7cdb9f64cb9948615 376 PRINTS PR00959 Mevalonate kinase family signature 154 173 3.3E-40 T 14-10-2018 AMIS_74930 93c408cfe04d7be7cdb9f64cb9948615 376 PRINTS PR00959 Mevalonate kinase family signature 322 339 3.3E-40 T 14-10-2018 AMIS_74930 93c408cfe04d7be7cdb9f64cb9948615 376 Gene3D G3DSA:3.30.230.10 18 193 3.5E-128 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMIS_74930 93c408cfe04d7be7cdb9f64cb9948615 376 SUPERFAMILY SSF54211 3 194 5.09E-58 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMIS_74930 93c408cfe04d7be7cdb9f64cb9948615 376 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 113 124 - T 14-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 AMIS_74930 93c408cfe04d7be7cdb9f64cb9948615 376 PIRSF PIRSF000530 1 376 2.7E-114 T 14-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AMIS_74930 93c408cfe04d7be7cdb9f64cb9948615 376 ProSitePatterns PS00106 Galactokinase signature. 23 34 - T 14-10-2018 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AMIS_74930 93c408cfe04d7be7cdb9f64cb9948615 376 Gene3D G3DSA:3.30.70.890 194 350 3.5E-128 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily AMIS_59150 3ef4bb4650f07236babfbe8b82309e00 189 Gene3D G3DSA:3.40.50.740 101 189 2.2E-31 T 14-10-2018 AMIS_59150 3ef4bb4650f07236babfbe8b82309e00 189 SUPERFAMILY SSF53706 43 189 3.01E-46 T 14-10-2018 AMIS_59150 3ef4bb4650f07236babfbe8b82309e00 189 SMART SM00926 44 98 4.4E-20 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_59150 3ef4bb4650f07236babfbe8b82309e00 189 Gene3D G3DSA:2.20.25.90 40 99 1.1E-19 T 14-10-2018 AMIS_59150 3ef4bb4650f07236babfbe8b82309e00 189 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 47 92 3.0E-18 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_32450 005b01849a228c6b7ab6237dcd731af7 425 Gene3D G3DSA:1.20.1530.20 6 403 1.8E-86 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily AMIS_32450 005b01849a228c6b7ab6237dcd731af7 425 Pfam PF00999 Sodium/hydrogen exchanger family 14 396 1.4E-52 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AMIS_40640 71d50405aebf7f52f907a2ae3f870201 195 SUPERFAMILY SSF46689 16 77 4.42E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_40640 71d50405aebf7f52f907a2ae3f870201 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 46 69 3.4E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_40640 71d50405aebf7f52f907a2ae3f870201 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 25 38 3.4E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_40640 71d50405aebf7f52f907a2ae3f870201 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 68 8.1E-14 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_40640 71d50405aebf7f52f907a2ae3f870201 195 SUPERFAMILY SSF48498 82 187 1.71E-9 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_40640 71d50405aebf7f52f907a2ae3f870201 195 Pfam PF16859 Bacterial transcriptional repressor C-terminal 82 186 5.5E-13 T 14-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AMIS_40640 71d50405aebf7f52f907a2ae3f870201 195 Gene3D G3DSA:1.10.357.10 64 193 3.5E-15 T 14-10-2018 AMIS_40640 71d50405aebf7f52f907a2ae3f870201 195 Gene3D G3DSA:1.10.10.60 10 63 1.1E-22 T 14-10-2018 AMIS_2970 630e80512f3f6a6a8e5441fc376b32ba 338 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 215 227 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site AMIS_2970 630e80512f3f6a6a8e5441fc376b32ba 338 SUPERFAMILY SSF48576 23 337 1.92E-81 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily AMIS_2970 630e80512f3f6a6a8e5441fc376b32ba 338 Pfam PF00348 Polyprenyl synthetase 45 273 1.1E-59 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 AMIS_2970 630e80512f3f6a6a8e5441fc376b32ba 338 Gene3D G3DSA:1.10.600.10 11 338 3.7E-104 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily AMIS_37400 2481469723c54a084ee3c8738955c5f9 558 Pfam PF07730 Histidine kinase 364 426 3.3E-13 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMIS_37400 2481469723c54a084ee3c8738955c5f9 558 Gene3D G3DSA:3.30.450.40 51 203 2.6E-53 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_37400 2481469723c54a084ee3c8738955c5f9 558 SUPERFAMILY SSF55874 463 556 6.81E-16 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_37400 2481469723c54a084ee3c8738955c5f9 558 Gene3D G3DSA:3.30.450.40 225 363 9.6E-16 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_37400 2481469723c54a084ee3c8738955c5f9 558 Gene3D G3DSA:3.30.565.10 429 553 1.0E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_37400 2481469723c54a084ee3c8738955c5f9 558 SMART SM00387 465 555 1.5E-4 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_37400 2481469723c54a084ee3c8738955c5f9 558 SUPERFAMILY SSF55781 207 373 3.27E-15 T 14-10-2018 AMIS_37400 2481469723c54a084ee3c8738955c5f9 558 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 468 518 5.3E-6 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_37400 2481469723c54a084ee3c8738955c5f9 558 Pfam PF13185 GAF domain 54 194 5.2E-16 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_37400 2481469723c54a084ee3c8738955c5f9 558 SMART SM00065 55 203 1.1E-21 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_37400 2481469723c54a084ee3c8738955c5f9 558 SMART SM00065 224 356 0.002 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_37400 2481469723c54a084ee3c8738955c5f9 558 SUPERFAMILY SSF55781 37 220 5.02E-40 T 14-10-2018 AMIS_4890 6fa6d0254e4f7cebf0599f016f612669 534 Gene3D G3DSA:2.60.40.1120 279 362 9.1E-22 T 14-10-2018 AMIS_4890 6fa6d0254e4f7cebf0599f016f612669 534 SUPERFAMILY SSF74650 37 274 6.91E-52 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 AMIS_4890 6fa6d0254e4f7cebf0599f016f612669 534 Pfam PF14683 Polysaccharide lyase family 4, domain III 367 531 1.8E-31 T 14-10-2018 IPR029411 Rhamnogalacturonan lyase, domain III MetaCyc: PWY-6769|MetaCyc: PWY-6771 AMIS_4890 6fa6d0254e4f7cebf0599f016f612669 534 Pfam PF09284 Rhamnogalacturonan lyase B, N-terminal 35 270 2.7E-69 T 14-10-2018 IPR015364 Rhamnogalacturonase B, N-terminal GO:0005975|GO:0016837|GO:0030246 MetaCyc: PWY-6769|MetaCyc: PWY-6771 AMIS_4890 6fa6d0254e4f7cebf0599f016f612669 534 Pfam PF14686 Polysaccharide lyase family 4, domain II 283 356 1.3E-15 T 14-10-2018 IPR029413 Rhamnogalacturonan lyase, domain II MetaCyc: PWY-6769|MetaCyc: PWY-6771 AMIS_4890 6fa6d0254e4f7cebf0599f016f612669 534 Gene3D G3DSA:2.60.120.260 364 532 8.3E-61 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_4890 6fa6d0254e4f7cebf0599f016f612669 534 SUPERFAMILY SSF49785 366 531 1.9E-40 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_4890 6fa6d0254e4f7cebf0599f016f612669 534 Gene3D G3DSA:2.70.98.10 30 278 8.2E-70 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AMIS_4890 6fa6d0254e4f7cebf0599f016f612669 534 SUPERFAMILY SSF49452 281 359 4.9E-7 T 14-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 AMIS_4460 81e44d14ea29127b2c7ab482792ddc82 756 SUPERFAMILY SSF141868 506 754 4.58E-87 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_4460 81e44d14ea29127b2c7ab482792ddc82 756 Gene3D G3DSA:3.30.70.270 330 503 6.3E-53 T 14-10-2018 AMIS_4460 81e44d14ea29127b2c7ab482792ddc82 756 SUPERFAMILY SSF55073 336 492 2.2E-43 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_4460 81e44d14ea29127b2c7ab482792ddc82 756 SMART SM00052 500 748 2.0E-116 T 14-10-2018 IPR001633 EAL domain AMIS_4460 81e44d14ea29127b2c7ab482792ddc82 756 SMART SM00065 180 329 4.8E-12 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_4460 81e44d14ea29127b2c7ab482792ddc82 756 SUPERFAMILY SSF55781 159 327 1.22E-21 T 14-10-2018 AMIS_4460 81e44d14ea29127b2c7ab482792ddc82 756 SMART SM00267 322 490 1.4E-53 T 14-10-2018 IPR000160 GGDEF domain AMIS_4460 81e44d14ea29127b2c7ab482792ddc82 756 Gene3D G3DSA:3.20.20.450 504 755 3.3E-101 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_4460 81e44d14ea29127b2c7ab482792ddc82 756 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 330 489 3.1E-34 T 14-10-2018 IPR000160 GGDEF domain AMIS_4460 81e44d14ea29127b2c7ab482792ddc82 756 Pfam PF00563 EAL domain 506 743 7.8E-74 T 14-10-2018 IPR001633 EAL domain AMIS_4460 81e44d14ea29127b2c7ab482792ddc82 756 Pfam PF13185 GAF domain 182 319 7.5E-10 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_4460 81e44d14ea29127b2c7ab482792ddc82 756 Pfam PF00990 Diguanylate cyclase, GGDEF domain 331 486 4.0E-42 T 14-10-2018 IPR000160 GGDEF domain AMIS_4460 81e44d14ea29127b2c7ab482792ddc82 756 Gene3D G3DSA:3.30.450.40 155 329 1.8E-26 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_62180 660f9701f67256a26296879c35eb66ca 194 Hamap MF_01219 Bifunctional protein PyrR [pyrR]. 18 191 35.367 T 14-10-2018 IPR023050 Bifunctional protein PyrR KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 AMIS_62180 660f9701f67256a26296879c35eb66ca 194 Pfam PF00156 Phosphoribosyl transferase domain 19 162 7.8E-23 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AMIS_62180 660f9701f67256a26296879c35eb66ca 194 SUPERFAMILY SSF53271 19 183 3.45E-40 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like AMIS_62180 660f9701f67256a26296879c35eb66ca 194 Gene3D G3DSA:3.40.50.2020 7 192 6.0E-60 T 14-10-2018 AMIS_15890 5b8ffd1d42c3f26df614b87285048989 705 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 11 693 0.0 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 AMIS_15890 5b8ffd1d42c3f26df614b87285048989 705 Gene3D G3DSA:3.40.50.300 4 248 5.8E-69 T 14-10-2018 AMIS_15890 5b8ffd1d42c3f26df614b87285048989 705 Hamap MF_00204 UvrABC system protein B [uvrB]. 10 695 42.456 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 AMIS_15890 5b8ffd1d42c3f26df614b87285048989 705 Pfam PF12344 Ultra-violet resistance protein B 558 599 3.7E-20 T 14-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain AMIS_15890 5b8ffd1d42c3f26df614b87285048989 705 Pfam PF04851 Type III restriction enzyme, res subunit 19 126 7.9E-10 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AMIS_15890 5b8ffd1d42c3f26df614b87285048989 705 Gene3D G3DSA:4.10.860.10 646 697 2.6E-8 T 14-10-2018 AMIS_15890 5b8ffd1d42c3f26df614b87285048989 705 SUPERFAMILY SSF52540 40 587 1.39E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_15890 5b8ffd1d42c3f26df614b87285048989 705 SMART SM00490 466 552 1.5E-18 T 14-10-2018 IPR001650 Helicase, C-terminal AMIS_15890 5b8ffd1d42c3f26df614b87285048989 705 SUPERFAMILY SSF52540 12 421 7.04E-131 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_15890 5b8ffd1d42c3f26df614b87285048989 705 SMART SM00487 16 432 2.7E-25 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMIS_15890 5b8ffd1d42c3f26df614b87285048989 705 Pfam PF02151 UvrB/uvrC motif 661 695 2.1E-7 T 14-10-2018 IPR001943 UVR domain GO:0005515 AMIS_15890 5b8ffd1d42c3f26df614b87285048989 705 SUPERFAMILY SSF46600 655 697 1.44E-9 T 14-10-2018 IPR036876 UVR domain superfamily AMIS_15890 5b8ffd1d42c3f26df614b87285048989 705 Gene3D G3DSA:3.40.50.300 421 602 5.4E-49 T 14-10-2018 AMIS_15890 5b8ffd1d42c3f26df614b87285048989 705 Gene3D G3DSA:3.40.50.300 280 420 9.4E-54 T 14-10-2018 AMIS_15890 5b8ffd1d42c3f26df614b87285048989 705 Pfam PF00271 Helicase conserved C-terminal domain 447 550 6.8E-18 T 14-10-2018 IPR001650 Helicase, C-terminal AMIS_66340 7e2b2fb91eeafa63e94f2f9620ace6b9 253 Gene3D G3DSA:3.40.1010.10 1 142 5.3E-42 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 AMIS_66340 7e2b2fb91eeafa63e94f2f9620ace6b9 253 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 220 3.3E-29 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 AMIS_66340 7e2b2fb91eeafa63e94f2f9620ace6b9 253 Gene3D G3DSA:3.30.950.10 143 251 1.8E-44 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 AMIS_66340 7e2b2fb91eeafa63e94f2f9620ace6b9 253 PIRSF PIRSF036525 1 252 7.4E-108 T 14-10-2018 IPR012797 Cobalamin (vitamin B12) biosynthesis CobF, precorrin-6A synthase GO:0009236|GO:0043819 KEGG: 00860+2.1.1.152|MetaCyc: PWY-7376 AMIS_66340 7e2b2fb91eeafa63e94f2f9620ace6b9 253 TIGRFAM TIGR02434 CobF: precorrin-6A synthase (deacetylating) 2 247 1.4E-103 T 14-10-2018 IPR012797 Cobalamin (vitamin B12) biosynthesis CobF, precorrin-6A synthase GO:0009236|GO:0043819 KEGG: 00860+2.1.1.152|MetaCyc: PWY-7376 AMIS_66340 7e2b2fb91eeafa63e94f2f9620ace6b9 253 SUPERFAMILY SSF53790 1 247 1.96E-36 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 AMIS_78080 10319fc3952d96ed512898c0dfa7c779 500 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 262 494 4.7E-47 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AMIS_78080 10319fc3952d96ed512898c0dfa7c779 500 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 109 145 1.1E-5 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 AMIS_78080 10319fc3952d96ed512898c0dfa7c779 500 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 303 475 6.1E-40 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AMIS_78080 10319fc3952d96ed512898c0dfa7c779 500 SUPERFAMILY SSF56601 93 498 4.32E-61 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMIS_78080 10319fc3952d96ed512898c0dfa7c779 500 Gene3D G3DSA:3.40.710.10 86 210 4.1E-12 T 14-10-2018 AMIS_78080 10319fc3952d96ed512898c0dfa7c779 500 Gene3D G3DSA:3.40.710.10 279 496 2.2E-55 T 14-10-2018 AMIS_78080 10319fc3952d96ed512898c0dfa7c779 500 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 386 400 2.3E-22 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AMIS_78080 10319fc3952d96ed512898c0dfa7c779 500 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 127 146 2.3E-22 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AMIS_78080 10319fc3952d96ed512898c0dfa7c779 500 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 313 335 2.3E-22 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AMIS_78080 10319fc3952d96ed512898c0dfa7c779 500 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 454 467 2.3E-22 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AMIS_78080 10319fc3952d96ed512898c0dfa7c779 500 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 371 385 2.3E-22 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AMIS_69820 f10611e5ef1921677f56ebeb4278d8ed 219 Gene3D G3DSA:3.40.50.12740 3 214 5.4E-66 T 14-10-2018 AMIS_69820 f10611e5ef1921677f56ebeb4278d8ed 219 ProSitePatterns PS00622 LuxR-type HTH domain signature. 168 195 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_69820 f10611e5ef1921677f56ebeb4278d8ed 219 SMART SM00421 151 208 8.0E-24 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_69820 f10611e5ef1921677f56ebeb4278d8ed 219 SUPERFAMILY SSF52172 3 132 1.57E-32 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_69820 f10611e5ef1921677f56ebeb4278d8ed 219 Pfam PF00072 Response regulator receiver domain 5 116 3.0E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_69820 f10611e5ef1921677f56ebeb4278d8ed 219 SUPERFAMILY SSF46894 142 214 6.12E-22 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_69820 f10611e5ef1921677f56ebeb4278d8ed 219 SMART SM00448 3 115 1.6E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_69820 f10611e5ef1921677f56ebeb4278d8ed 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 2.9E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_69820 f10611e5ef1921677f56ebeb4278d8ed 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 2.9E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_69820 f10611e5ef1921677f56ebeb4278d8ed 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 2.9E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_69820 f10611e5ef1921677f56ebeb4278d8ed 219 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 208 1.3E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_60110 69189fd1ea01ab861bde3837f865cefd 447 SUPERFAMILY SSF63737 18 209 2.22E-37 T 14-10-2018 AMIS_60110 69189fd1ea01ab861bde3837f865cefd 447 Gene3D G3DSA:1.10.390.60 220 438 8.3E-39 T 14-10-2018 AMIS_60110 69189fd1ea01ab861bde3837f865cefd 447 Gene3D G3DSA:2.60.40.1730 27 211 4.9E-26 T 14-10-2018 AMIS_60110 69189fd1ea01ab861bde3837f865cefd 447 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 315 327 6.1E-13 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMIS_60110 69189fd1ea01ab861bde3837f865cefd 447 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 296 311 6.1E-13 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMIS_60110 69189fd1ea01ab861bde3837f865cefd 447 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 193 208 6.1E-13 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMIS_60110 69189fd1ea01ab861bde3837f865cefd 447 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 146 161 6.1E-13 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMIS_60110 69189fd1ea01ab861bde3837f865cefd 447 SUPERFAMILY SSF55486 220 442 1.25E-51 T 14-10-2018 AMIS_60110 69189fd1ea01ab861bde3837f865cefd 447 Pfam PF01433 Peptidase family M1 domain 250 434 1.2E-27 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMIS_59710 5ba0c2a645c00f50cce7704ab61d6396 229 Gene3D G3DSA:3.40.50.300 2 228 4.4E-50 T 14-10-2018 AMIS_59710 5ba0c2a645c00f50cce7704ab61d6396 229 ProSitePatterns PS00211 ABC transporters family signature. 127 141 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_59710 5ba0c2a645c00f50cce7704ab61d6396 229 SMART SM00382 29 226 2.8E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_59710 5ba0c2a645c00f50cce7704ab61d6396 229 Pfam PF00005 ABC transporter 21 153 2.5E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_59710 5ba0c2a645c00f50cce7704ab61d6396 229 SUPERFAMILY SSF52540 4 219 2.01E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_66030 c2ab089e8f5e287f3873ae1c50e8e278 552 SMART SM00448 4 126 1.6E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_66030 c2ab089e8f5e287f3873ae1c50e8e278 552 Pfam PF00072 Response regulator receiver domain 6 119 1.1E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_66030 c2ab089e8f5e287f3873ae1c50e8e278 552 Gene3D G3DSA:3.50.50.60 340 465 1.1E-90 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_66030 c2ab089e8f5e287f3873ae1c50e8e278 552 SUPERFAMILY SSF51905 218 549 3.37E-37 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_66030 c2ab089e8f5e287f3873ae1c50e8e278 552 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 328 346 3.4E-20 T 14-10-2018 AMIS_66030 c2ab089e8f5e287f3873ae1c50e8e278 552 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 371 389 3.4E-20 T 14-10-2018 AMIS_66030 c2ab089e8f5e287f3873ae1c50e8e278 552 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 457 473 3.4E-20 T 14-10-2018 AMIS_66030 c2ab089e8f5e287f3873ae1c50e8e278 552 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 229 248 3.4E-20 T 14-10-2018 AMIS_66030 c2ab089e8f5e287f3873ae1c50e8e278 552 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 502 524 3.4E-20 T 14-10-2018 AMIS_66030 c2ab089e8f5e287f3873ae1c50e8e278 552 Gene3D G3DSA:3.40.50.2300 2 140 5.1E-24 T 14-10-2018 AMIS_66030 c2ab089e8f5e287f3873ae1c50e8e278 552 SUPERFAMILY SSF52172 2 136 4.84E-24 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_66030 c2ab089e8f5e287f3873ae1c50e8e278 552 Gene3D G3DSA:3.50.50.60 229 548 1.1E-90 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_66030 c2ab089e8f5e287f3873ae1c50e8e278 552 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 228 250 1.3E-31 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMIS_66030 c2ab089e8f5e287f3873ae1c50e8e278 552 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 282 292 1.3E-31 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMIS_66030 c2ab089e8f5e287f3873ae1c50e8e278 552 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 329 337 1.3E-31 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMIS_66030 c2ab089e8f5e287f3873ae1c50e8e278 552 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 512 530 1.3E-31 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMIS_66030 c2ab089e8f5e287f3873ae1c50e8e278 552 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 261 276 1.3E-31 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMIS_66030 c2ab089e8f5e287f3873ae1c50e8e278 552 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 367 391 1.3E-31 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMIS_66030 c2ab089e8f5e287f3873ae1c50e8e278 552 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 227 538 2.0E-30 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMIS_66330 96248f89f1199e4524c50774b205bcd4 428 Gene3D G3DSA:1.10.150.20 163 230 1.4E-18 T 14-10-2018 AMIS_66330 96248f89f1199e4524c50774b205bcd4 428 Gene3D G3DSA:3.30.70.270 2 157 9.8E-54 T 14-10-2018 AMIS_66330 96248f89f1199e4524c50774b205bcd4 428 Gene3D G3DSA:2.30.40.20 19 66 9.8E-54 T 14-10-2018 AMIS_66330 96248f89f1199e4524c50774b205bcd4 428 Pfam PF11799 impB/mucB/samB family C-terminal domain 256 343 1.8E-15 T 14-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AMIS_66330 96248f89f1199e4524c50774b205bcd4 428 Pfam PF11798 IMS family HHH motif 161 189 5.0E-7 T 14-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 AMIS_66330 96248f89f1199e4524c50774b205bcd4 428 SUPERFAMILY SSF56672 1 228 8.54E-75 T 14-10-2018 AMIS_66330 96248f89f1199e4524c50774b205bcd4 428 Hamap MF_01113 DNA polymerase IV [dinB]. 1 351 32.201 T 14-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 AMIS_66330 96248f89f1199e4524c50774b205bcd4 428 Gene3D G3DSA:3.30.1490.100 248 347 1.8E-17 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AMIS_66330 96248f89f1199e4524c50774b205bcd4 428 SUPERFAMILY SSF100879 253 353 1.71E-17 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AMIS_66330 96248f89f1199e4524c50774b205bcd4 428 Pfam PF00817 impB/mucB/samB family 6 146 2.2E-45 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AMIS_53290 e45a84bf395d93c0ce214783fef5badd 743 Pfam PF00069 Protein kinase domain 168 361 8.6E-30 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMIS_53290 e45a84bf395d93c0ce214783fef5badd 743 SUPERFAMILY SSF48452 524 618 1.84E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_53290 e45a84bf395d93c0ce214783fef5badd 743 Gene3D G3DSA:1.25.40.10 449 584 3.2E-79 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_53290 e45a84bf395d93c0ce214783fef5badd 743 Pfam PF16918 Protein kinase G tetratricopeptide repeat 447 741 5.9E-66 T 14-10-2018 IPR031636 Protein kinase G, tetratricopeptide repeat containing domain KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 AMIS_53290 e45a84bf395d93c0ce214783fef5badd 743 Gene3D G3DSA:3.30.200.20 119 248 1.1E-100 T 14-10-2018 AMIS_53290 e45a84bf395d93c0ce214783fef5badd 743 Pfam PF16919 Protein kinase G rubredoxin domain 24 166 4.0E-42 T 14-10-2018 IPR031634 Protein kinase G, rubredoxin domain KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 AMIS_53290 e45a84bf395d93c0ce214783fef5badd 743 Gene3D G3DSA:1.25.40.10 447 738 3.2E-79 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_53290 e45a84bf395d93c0ce214783fef5badd 743 SUPERFAMILY SSF56112 152 411 2.97E-46 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMIS_53290 e45a84bf395d93c0ce214783fef5badd 743 Gene3D G3DSA:1.10.510.10 249 410 1.1E-100 T 14-10-2018 AMIS_59980 d0a82ddfbf29624609f564ef97d7a8bc 306 SUPERFAMILY SSF160964 22 61 1.57E-5 T 14-10-2018 AMIS_59980 d0a82ddfbf29624609f564ef97d7a8bc 306 SUPERFAMILY SSF161098 68 293 1.57E-53 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_59980 d0a82ddfbf29624609f564ef97d7a8bc 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 299 3.2E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_59980 d0a82ddfbf29624609f564ef97d7a8bc 306 Gene3D G3DSA:1.10.3720.10 66 301 3.0E-62 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_71670 ca2b42ee82b2b1fe20fd388660fd4b61 318 Pfam PF03308 ArgK protein 23 280 1.2E-92 T 14-10-2018 AMIS_71670 ca2b42ee82b2b1fe20fd388660fd4b61 318 Gene3D G3DSA:3.40.50.300 48 255 1.1E-82 T 14-10-2018 AMIS_71670 ca2b42ee82b2b1fe20fd388660fd4b61 318 SMART SM00382 49 193 5.5E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_71670 ca2b42ee82b2b1fe20fd388660fd4b61 318 SUPERFAMILY SSF52540 5 314 3.79E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_71670 ca2b42ee82b2b1fe20fd388660fd4b61 318 TIGRFAM TIGR00750 lao: LAO/AO transport system ATPase 17 313 9.4E-97 T 14-10-2018 IPR005129 SIMIBI class G3E GTPase, ArgK/MeaB GO:0003924|GO:0005525 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 AMIS_52870 fa52143ab1837ec548aee12c5f719a9e 262 Pfam PF00005 ABC transporter 21 168 2.2E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_52870 fa52143ab1837ec548aee12c5f719a9e 262 SMART SM00382 29 218 6.5E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_52870 fa52143ab1837ec548aee12c5f719a9e 262 SUPERFAMILY SSF52540 6 230 1.81E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_52870 fa52143ab1837ec548aee12c5f719a9e 262 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_52870 fa52143ab1837ec548aee12c5f719a9e 262 Gene3D G3DSA:3.40.50.300 5 257 8.6E-68 T 14-10-2018 AMIS_69550 bf32dcdb3632fe1de69821f4f04c2880 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 2.0E-21 T 14-10-2018 AMIS_69550 bf32dcdb3632fe1de69821f4f04c2880 89 SMART SM01387 8 88 1.1E-52 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_69550 bf32dcdb3632fe1de69821f4f04c2880 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_69550 bf32dcdb3632fe1de69821f4f04c2880 89 SUPERFAMILY SSF47060 3 89 1.94E-35 T 14-10-2018 IPR009068 S15/NS1, RNA-binding AMIS_69550 bf32dcdb3632fe1de69821f4f04c2880 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 22.575 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_69550 bf32dcdb3632fe1de69821f4f04c2880 89 Gene3D G3DSA:1.10.287.10 1 89 9.9E-35 T 14-10-2018 AMIS_69550 bf32dcdb3632fe1de69821f4f04c2880 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 7.0E-40 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_69550 bf32dcdb3632fe1de69821f4f04c2880 89 Pfam PF00312 Ribosomal protein S15 8 88 2.2E-37 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_70590 35084a5483c93f540da6373a7e523fc8 1201 Gene3D G3DSA:3.40.50.300 1 228 2.6E-54 T 14-10-2018 AMIS_70590 35084a5483c93f540da6373a7e523fc8 1201 SMART SM00968 512 630 5.4E-21 T 14-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 AMIS_70590 35084a5483c93f540da6373a7e523fc8 1201 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1179 6.8E-71 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal AMIS_70590 35084a5483c93f540da6373a7e523fc8 1201 PIRSF PIRSF005719 1 1195 1.9E-250 T 14-10-2018 IPR024704 Structural maintenance of chromosomes protein AMIS_70590 35084a5483c93f540da6373a7e523fc8 1201 Gene3D G3DSA:1.20.1060.20 500 660 3.4E-19 T 14-10-2018 AMIS_70590 35084a5483c93f540da6373a7e523fc8 1201 Gene3D G3DSA:3.40.50.300 1036 1190 1.9E-44 T 14-10-2018 AMIS_70590 35084a5483c93f540da6373a7e523fc8 1201 SUPERFAMILY SSF52540 2 1178 3.83E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_70590 35084a5483c93f540da6373a7e523fc8 1201 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1189 22.062 T 14-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 AMIS_70590 35084a5483c93f540da6373a7e523fc8 1201 Gene3D G3DSA:3.30.70.1620 572 657 3.4E-19 T 14-10-2018 AMIS_70590 35084a5483c93f540da6373a7e523fc8 1201 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 3 1187 1.2E-280 T 14-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 AMIS_70590 35084a5483c93f540da6373a7e523fc8 1201 SUPERFAMILY SSF75553 495 672 2.88E-24 T 14-10-2018 IPR036277 SMCs flexible hinge superfamily GO:0005515|GO:0005524|GO:0005694|GO:0051276 AMIS_70590 35084a5483c93f540da6373a7e523fc8 1201 Pfam PF06470 SMC proteins Flexible Hinge Domain 512 629 9.3E-19 T 14-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 AMIS_6710 3d68bb4aebed1b5b1f6b928419f35d6a 145 Pfam PF00583 Acetyltransferase (GNAT) family 31 119 1.2E-16 T 14-10-2018 IPR000182 GNAT domain AMIS_6710 3d68bb4aebed1b5b1f6b928419f35d6a 145 Gene3D G3DSA:3.40.630.30 2 145 7.7E-38 T 14-10-2018 AMIS_6710 3d68bb4aebed1b5b1f6b928419f35d6a 145 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 12 141 7.8E-32 T 14-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 AMIS_6710 3d68bb4aebed1b5b1f6b928419f35d6a 145 SUPERFAMILY SSF55729 1 132 6.81E-30 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_8420 0e9b4e7c608d0eb0ac7f786daba5e50e 617 SMART SM00458 490 617 8.4E-30 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_8420 0e9b4e7c608d0eb0ac7f786daba5e50e 617 Gene3D G3DSA:2.80.10.50 486 577 1.0E-27 T 14-10-2018 AMIS_8420 0e9b4e7c608d0eb0ac7f786daba5e50e 617 Gene3D G3DSA:3.20.20.80 80 426 4.0E-109 T 14-10-2018 AMIS_8420 0e9b4e7c608d0eb0ac7f786daba5e50e 617 Gene3D G3DSA:2.60.40.1180 57 485 4.0E-109 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta AMIS_8420 0e9b4e7c608d0eb0ac7f786daba5e50e 617 SUPERFAMILY SSF51011 420 485 1.65E-8 T 14-10-2018 AMIS_8420 0e9b4e7c608d0eb0ac7f786daba5e50e 617 Pfam PF00652 Ricin-type beta-trefoil lectin domain 496 614 3.6E-29 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_8420 0e9b4e7c608d0eb0ac7f786daba5e50e 617 SUPERFAMILY SSF50370 493 616 1.2E-38 T 14-10-2018 IPR035992 Ricin B-like lectins AMIS_8420 0e9b4e7c608d0eb0ac7f786daba5e50e 617 SUPERFAMILY SSF51445 82 426 3.14E-59 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_8420 0e9b4e7c608d0eb0ac7f786daba5e50e 617 Pfam PF17189 Glycosyl hydrolase family 30 beta sandwich domain 425 483 1.9E-13 T 14-10-2018 IPR033452 Glycosyl hydrolase family 30, beta sandwich domain Reactome: R-HSA-1660662|Reactome: R-HSA-390471 AMIS_8420 0e9b4e7c608d0eb0ac7f786daba5e50e 617 Gene3D G3DSA:2.80.10.50 578 617 7.6E-13 T 14-10-2018 AMIS_8420 0e9b4e7c608d0eb0ac7f786daba5e50e 617 Pfam PF02055 Glycosyl hydrolase family 30 TIM-barrel domain 84 382 1.4E-26 T 14-10-2018 IPR033453 Glycosyl hydrolase family 30, TIM-barrel domain Reactome: R-HSA-1660662|Reactome: R-HSA-390471 AMIS_19080 e1c6f10d02e44cffe251bedb16fdb292 199 SUPERFAMILY SSF51735 1 196 1.55E-28 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_19080 e1c6f10d02e44cffe251bedb16fdb292 199 Pfam PF13460 NAD(P)H-binding 8 186 4.8E-22 T 14-10-2018 IPR016040 NAD(P)-binding domain AMIS_19080 e1c6f10d02e44cffe251bedb16fdb292 199 Gene3D G3DSA:3.40.50.720 3 196 4.4E-39 T 14-10-2018 AMIS_70260 569b0edfdd132b950839804e8477f046 85 Gene3D G3DSA:3.30.300.20 14 75 1.2E-6 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta AMIS_70260 569b0edfdd132b950839804e8477f046 85 Hamap MF_00088 UPF0109 protein . 11 82 20.609 T 14-10-2018 IPR020627 Uncharacterised protein family UPF0109 AMIS_70260 569b0edfdd132b950839804e8477f046 85 SUPERFAMILY SSF54814 25 70 1.37E-8 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 AMIS_70260 569b0edfdd132b950839804e8477f046 85 Pfam PF13083 KH domain 14 72 9.6E-18 T 14-10-2018 AMIS_27400 caac0152d98f27bade03f26514c41d21 1152 Gene3D G3DSA:2.120.10.30 24 411 1.2E-64 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AMIS_27400 caac0152d98f27bade03f26514c41d21 1152 SUPERFAMILY SSF50952 31 460 2.09E-25 T 14-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 AMIS_27400 caac0152d98f27bade03f26514c41d21 1152 Gene3D G3DSA:2.60.40.10 458 553 2.7E-22 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_27400 caac0152d98f27bade03f26514c41d21 1152 Pfam PF13205 Bacterial Ig-like domain 894 999 2.2E-26 T 14-10-2018 IPR032812 SbsA, Ig-like domain AMIS_27400 caac0152d98f27bade03f26514c41d21 1152 Pfam PF00801 PKD domain 473 545 1.6E-10 T 14-10-2018 IPR000601 PKD domain AMIS_27400 caac0152d98f27bade03f26514c41d21 1152 Pfam PF07995 Glucose / Sorbosone dehydrogenase 48 328 1.7E-29 T 14-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase AMIS_27400 caac0152d98f27bade03f26514c41d21 1152 Gene3D G3DSA:2.60.40.1220 910 999 4.4E-10 T 14-10-2018 AMIS_27400 caac0152d98f27bade03f26514c41d21 1152 SMART SM00089 468 554 3.9E-16 T 14-10-2018 IPR022409 PKD/Chitinase domain AMIS_27400 caac0152d98f27bade03f26514c41d21 1152 SUPERFAMILY SSF49299 464 554 9.42E-19 T 14-10-2018 IPR035986 PKD domain superfamily AMIS_550 0cc91b09786a60f3f205249818c82f16 458 Pfam PF03471 Transporter associated domain 379 450 2.8E-22 T 14-10-2018 IPR005170 Transporter-associated domain AMIS_550 0cc91b09786a60f3f205249818c82f16 458 Gene3D G3DSA:3.30.465.10 381 452 1.5E-21 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AMIS_550 0cc91b09786a60f3f205249818c82f16 458 SMART SM01091 375 453 4.3E-25 T 14-10-2018 IPR005170 Transporter-associated domain AMIS_550 0cc91b09786a60f3f205249818c82f16 458 Pfam PF01595 Domain of unknown function DUF21 28 218 9.4E-37 T 14-10-2018 IPR002550 CNNM, transmembrane domain AMIS_550 0cc91b09786a60f3f205249818c82f16 458 Gene3D G3DSA:3.10.580.10 217 362 1.4E-43 T 14-10-2018 AMIS_550 0cc91b09786a60f3f205249818c82f16 458 SUPERFAMILY SSF54631 229 366 1.39E-24 T 14-10-2018 AMIS_550 0cc91b09786a60f3f205249818c82f16 458 SUPERFAMILY SSF56176 378 457 1.53E-22 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AMIS_550 0cc91b09786a60f3f205249818c82f16 458 Pfam PF00571 CBS domain 304 354 6.3E-6 T 14-10-2018 IPR000644 CBS domain AMIS_29740 f808dfecf8d06cd071397f5a55ff5686 308 Gene3D G3DSA:1.10.3720.10 68 306 1.3E-52 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_29740 f808dfecf8d06cd071397f5a55ff5686 308 SUPERFAMILY SSF161098 72 291 8.5E-47 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_29740 f808dfecf8d06cd071397f5a55ff5686 308 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 302 6.2E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_9610 c2ba50693f37c82904318f0f7a435680 158 SUPERFAMILY SSF52833 7 155 1.12E-45 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMIS_9610 c2ba50693f37c82904318f0f7a435680 158 Gene3D G3DSA:3.40.30.10 4 156 5.4E-47 T 14-10-2018 AMIS_9610 c2ba50693f37c82904318f0f7a435680 158 PIRSF PIRSF000239 2 153 4.6E-21 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AMIS_9610 c2ba50693f37c82904318f0f7a435680 158 Pfam PF00578 AhpC/TSA family 10 136 2.5E-36 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AMIS_74990 ed53fb3371a33babba3c3a5054b5b9d0 569 Pfam PF02397 Bacterial sugar transferase 376 563 5.0E-65 T 14-10-2018 IPR003362 Bacterial sugar transferase AMIS_74990 ed53fb3371a33babba3c3a5054b5b9d0 569 Gene3D G3DSA:3.40.50.720 241 361 6.2E-5 T 14-10-2018 AMIS_74990 ed53fb3371a33babba3c3a5054b5b9d0 569 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 119 569 1.3E-127 T 14-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase AMIS_74990 ed53fb3371a33babba3c3a5054b5b9d0 569 Pfam PF13727 CoA-binding domain 177 335 1.2E-7 T 14-10-2018 AMIS_46570 d90c38ef6ff483ec77b9aeb8eaeef9db 322 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 14-10-2018 AMIS_46570 d90c38ef6ff483ec77b9aeb8eaeef9db 322 Gene3D G3DSA:1.10.260.40 1 55 6.3E-21 T 14-10-2018 AMIS_46570 d90c38ef6ff483ec77b9aeb8eaeef9db 322 SUPERFAMILY SSF47413 2 59 1.97E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_46570 d90c38ef6ff483ec77b9aeb8eaeef9db 322 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 4.4E-15 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_46570 d90c38ef6ff483ec77b9aeb8eaeef9db 322 SUPERFAMILY SSF53822 63 318 2.16E-53 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_46570 d90c38ef6ff483ec77b9aeb8eaeef9db 322 SMART SM00354 2 71 9.5E-26 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_46570 d90c38ef6ff483ec77b9aeb8eaeef9db 322 Gene3D G3DSA:3.40.50.2300 156 275 2.7E-59 T 14-10-2018 AMIS_46570 d90c38ef6ff483ec77b9aeb8eaeef9db 322 Gene3D G3DSA:3.40.50.2300 56 292 2.7E-59 T 14-10-2018 AMIS_46570 d90c38ef6ff483ec77b9aeb8eaeef9db 322 Pfam PF13377 Periplasmic binding protein-like domain 165 317 2.0E-29 T 14-10-2018 AMIS_37980 22256d07746d0bd22412475322190ee5 360 Gene3D G3DSA:3.30.1540.10 218 304 7.4E-34 T 14-10-2018 AMIS_37980 22256d07746d0bd22412475322190ee5 360 Gene3D G3DSA:3.40.50.10540 4 217 6.3E-77 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily AMIS_37980 22256d07746d0bd22412475322190ee5 360 Gene3D G3DSA:3.30.60.110 305 337 5.8E-7 T 14-10-2018 AMIS_37980 22256d07746d0bd22412475322190ee5 360 Pfam PF02515 CoA-transferase family III 9 345 6.8E-81 T 14-10-2018 IPR003673 CoA-transferase family III GO:0003824 AMIS_37980 22256d07746d0bd22412475322190ee5 360 SUPERFAMILY SSF89796 7 347 3.01E-110 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily AMIS_59960 cff6585a658356447d574ac9d3b5f8fd 798 SUPERFAMILY SSF49303 184 285 2.37E-11 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily AMIS_59960 cff6585a658356447d574ac9d3b5f8fd 798 Gene3D G3DSA:2.60.40.10 188 282 3.8E-6 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_59960 cff6585a658356447d574ac9d3b5f8fd 798 SUPERFAMILY SSF51445 282 630 6.83E-98 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_59960 cff6585a658356447d574ac9d3b5f8fd 798 Gene3D G3DSA:3.20.20.80 283 628 1.5E-109 T 14-10-2018 AMIS_59960 cff6585a658356447d574ac9d3b5f8fd 798 SUPERFAMILY SSF49785 6 180 5.61E-42 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_59960 cff6585a658356447d574ac9d3b5f8fd 798 Gene3D G3DSA:2.60.120.260 4 182 4.3E-52 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_20820 0de96cfe1d3a6c897f746d4edac4b08d 1032 Gene3D G3DSA:2.60.40.10 197 272 7.5E-8 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_20820 0de96cfe1d3a6c897f746d4edac4b08d 1032 SUPERFAMILY SSF49265 4 162 1.95E-10 T 14-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 AMIS_20820 0de96cfe1d3a6c897f746d4edac4b08d 1032 Gene3D G3DSA:2.60.40.10 79 162 4.6E-8 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_20820 0de96cfe1d3a6c897f746d4edac4b08d 1032 Gene3D G3DSA:2.60.40.10 2 49 1.2E-9 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_37710 b9c00606a27870a7c1220802a87771c1 426 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 12 426 4.3E-178 T 14-10-2018 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 AMIS_37710 b9c00606a27870a7c1220802a87771c1 426 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 241 278 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMIS_37710 b9c00606a27870a7c1220802a87771c1 426 Pfam PF00202 Aminotransferase class-III 28 425 6.9E-129 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMIS_37710 b9c00606a27870a7c1220802a87771c1 426 Gene3D G3DSA:3.40.640.10 62 323 1.1E-164 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_37710 b9c00606a27870a7c1220802a87771c1 426 Gene3D G3DSA:3.90.1150.10 12 421 1.1E-164 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMIS_37710 b9c00606a27870a7c1220802a87771c1 426 PIRSF PIRSF000521 3 132 3.1E-5 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMIS_37710 b9c00606a27870a7c1220802a87771c1 426 PIRSF PIRSF000521 125 426 2.8E-35 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMIS_37710 b9c00606a27870a7c1220802a87771c1 426 SUPERFAMILY SSF53383 27 425 9.99E-123 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_34170 96ac71e4a8813e79ad63daa1e97f83e6 422 Gene3D G3DSA:3.40.50.2000 218 402 2.9E-34 T 14-10-2018 AMIS_34170 96ac71e4a8813e79ad63daa1e97f83e6 422 Gene3D G3DSA:3.40.50.2000 135 217 2.9E-34 T 14-10-2018 AMIS_34170 96ac71e4a8813e79ad63daa1e97f83e6 422 Pfam PF00534 Glycosyl transferases group 1 242 394 3.4E-18 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 AMIS_34170 96ac71e4a8813e79ad63daa1e97f83e6 422 SUPERFAMILY SSF53756 162 412 1.17E-38 T 14-10-2018 AMIS_10500 359b905f6d13fb16c24716e1dd553610 229 Gene3D G3DSA:3.40.50.720 2 228 1.3E-56 T 14-10-2018 AMIS_10500 359b905f6d13fb16c24716e1dd553610 229 SUPERFAMILY SSF51735 4 228 3.66E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_10500 359b905f6d13fb16c24716e1dd553610 229 Pfam PF00106 short chain dehydrogenase 6 190 1.4E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_10500 359b905f6d13fb16c24716e1dd553610 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 6.9E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_10500 359b905f6d13fb16c24716e1dd553610 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 6.9E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_10500 359b905f6d13fb16c24716e1dd553610 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 6.9E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_10500 359b905f6d13fb16c24716e1dd553610 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 6.9E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_10500 359b905f6d13fb16c24716e1dd553610 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 6.9E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_10500 359b905f6d13fb16c24716e1dd553610 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 193 213 6.9E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_10500 359b905f6d13fb16c24716e1dd553610 229 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMIS_17390 c1a8988bfaef9735645a1220af230324 924 Gene3D G3DSA:3.30.450.40 133 308 3.2E-22 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_17390 c1a8988bfaef9735645a1220af230324 924 Pfam PF08448 PAS fold 450 558 1.7E-9 T 14-10-2018 IPR013656 PAS fold-4 AMIS_17390 c1a8988bfaef9735645a1220af230324 924 Pfam PF08448 PAS fold 580 687 1.5E-14 T 14-10-2018 IPR013656 PAS fold-4 AMIS_17390 c1a8988bfaef9735645a1220af230324 924 SUPERFAMILY SSF55785 304 434 8.54E-28 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_17390 c1a8988bfaef9735645a1220af230324 924 SUPERFAMILY SSF55785 554 681 4.54E-24 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_17390 c1a8988bfaef9735645a1220af230324 924 Gene3D G3DSA:3.30.450.20 12 130 1.3E-24 T 14-10-2018 AMIS_17390 c1a8988bfaef9735645a1220af230324 924 SUPERFAMILY SSF55874 802 917 1.28E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_17390 c1a8988bfaef9735645a1220af230324 924 Pfam PF00989 PAS fold 15 128 4.5E-13 T 14-10-2018 IPR013767 PAS fold GO:0006355 AMIS_17390 c1a8988bfaef9735645a1220af230324 924 SMART SM00387 813 922 5.8E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_17390 c1a8988bfaef9735645a1220af230324 924 SUPERFAMILY SSF55785 27 138 6.93E-23 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_17390 c1a8988bfaef9735645a1220af230324 924 Pfam PF08447 PAS fold 344 426 1.7E-15 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 AMIS_17390 c1a8988bfaef9735645a1220af230324 924 Gene3D G3DSA:3.30.450.20 570 701 1.5E-22 T 14-10-2018 AMIS_17390 c1a8988bfaef9735645a1220af230324 924 Pfam PF00512 His Kinase A (phospho-acceptor) domain 716 778 6.2E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_17390 c1a8988bfaef9735645a1220af230324 924 PRINTS PR00344 Bacterial sensor protein C-terminal signature 848 862 1.4E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_17390 c1a8988bfaef9735645a1220af230324 924 PRINTS PR00344 Bacterial sensor protein C-terminal signature 882 900 1.4E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_17390 c1a8988bfaef9735645a1220af230324 924 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 816 919 1.2E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_17390 c1a8988bfaef9735645a1220af230324 924 SUPERFAMILY SSF55785 435 555 1.17E-15 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_17390 c1a8988bfaef9735645a1220af230324 924 Gene3D G3DSA:3.30.565.10 781 920 7.9E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_17390 c1a8988bfaef9735645a1220af230324 924 SMART SM00091 317 387 6.9E-8 T 14-10-2018 IPR000014 PAS domain AMIS_17390 c1a8988bfaef9735645a1220af230324 924 SMART SM00091 569 636 7.3E-6 T 14-10-2018 IPR000014 PAS domain AMIS_17390 c1a8988bfaef9735645a1220af230324 924 SMART SM00091 444 510 2.4E-5 T 14-10-2018 IPR000014 PAS domain AMIS_17390 c1a8988bfaef9735645a1220af230324 924 SMART SM00091 15 82 2.9E-11 T 14-10-2018 IPR000014 PAS domain AMIS_17390 c1a8988bfaef9735645a1220af230324 924 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 12 138 3.8E-20 T 14-10-2018 IPR000014 PAS domain AMIS_17390 c1a8988bfaef9735645a1220af230324 924 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 567 691 2.2E-20 T 14-10-2018 IPR000014 PAS domain AMIS_17390 c1a8988bfaef9735645a1220af230324 924 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 448 564 1.6E-7 T 14-10-2018 IPR000014 PAS domain AMIS_17390 c1a8988bfaef9735645a1220af230324 924 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 313 442 4.9E-22 T 14-10-2018 IPR000014 PAS domain AMIS_17390 c1a8988bfaef9735645a1220af230324 924 SMART SM00086 517 557 100.0 T 14-10-2018 IPR001610 PAC motif AMIS_17390 c1a8988bfaef9735645a1220af230324 924 SMART SM00086 643 685 1.5E-7 T 14-10-2018 IPR001610 PAC motif AMIS_17390 c1a8988bfaef9735645a1220af230324 924 SMART SM00086 394 436 5.5E-7 T 14-10-2018 IPR001610 PAC motif AMIS_17390 c1a8988bfaef9735645a1220af230324 924 SUPERFAMILY SSF55781 146 300 1.72E-20 T 14-10-2018 AMIS_17390 c1a8988bfaef9735645a1220af230324 924 SUPERFAMILY SSF47384 697 779 3.53E-11 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_17390 c1a8988bfaef9735645a1220af230324 924 Pfam PF13185 GAF domain 166 296 8.0E-13 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_17390 c1a8988bfaef9735645a1220af230324 924 Gene3D G3DSA:3.30.450.20 449 569 1.1E-16 T 14-10-2018 AMIS_17390 c1a8988bfaef9735645a1220af230324 924 Gene3D G3DSA:1.10.287.130 702 780 1.7E-11 T 14-10-2018 AMIS_17390 c1a8988bfaef9735645a1220af230324 924 SMART SM00388 712 778 5.5E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_17390 c1a8988bfaef9735645a1220af230324 924 Gene3D G3DSA:3.30.450.20 309 448 7.0E-28 T 14-10-2018 AMIS_17390 c1a8988bfaef9735645a1220af230324 924 SMART SM00065 162 306 1.2E-5 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_72900 45215ca199ed2c5b89f9823f8dd35d84 316 Gene3D G3DSA:2.60.200.40 138 305 6.4E-17 T 14-10-2018 AMIS_72900 45215ca199ed2c5b89f9823f8dd35d84 316 Gene3D G3DSA:3.40.50.10330 1 132 3.2E-32 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 AMIS_72900 45215ca199ed2c5b89f9823f8dd35d84 316 SUPERFAMILY SSF111331 1 316 6.02E-55 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily AMIS_72900 45215ca199ed2c5b89f9823f8dd35d84 316 SMART SM00046 2 140 7.4E-8 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 AMIS_72900 45215ca199ed2c5b89f9823f8dd35d84 316 Pfam PF00781 Diacylglycerol kinase catalytic domain 2 126 2.0E-25 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 AMIS_65800 b8b3c08cf3f509b225bf544978b14c88 494 Gene3D G3DSA:2.115.10.20 260 493 4.6E-54 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMIS_65800 b8b3c08cf3f509b225bf544978b14c88 494 Pfam PF04041 beta-1,4-mannooligosaccharide phosphorylase 266 488 1.6E-23 T 14-10-2018 IPR007184 Mannoside phosphorylase AMIS_65800 b8b3c08cf3f509b225bf544978b14c88 494 SUPERFAMILY SSF75005 269 483 3.69E-47 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMIS_59310 d4d3b7053d7961feac066fb5cc7336ea 311 SUPERFAMILY SSF46689 260 310 3.59E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_59310 d4d3b7053d7961feac066fb5cc7336ea 311 SMART SM00342 223 306 5.8E-26 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMIS_59310 d4d3b7053d7961feac066fb5cc7336ea 311 Pfam PF01965 DJ-1/PfpI family 5 168 1.6E-14 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 AMIS_59310 d4d3b7053d7961feac066fb5cc7336ea 311 Gene3D G3DSA:3.40.50.880 2 204 9.6E-51 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_59310 d4d3b7053d7961feac066fb5cc7336ea 311 SUPERFAMILY SSF52317 2 189 3.97E-44 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_59310 d4d3b7053d7961feac066fb5cc7336ea 311 Pfam PF12833 Helix-turn-helix domain 229 307 1.5E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMIS_59310 d4d3b7053d7961feac066fb5cc7336ea 311 Gene3D G3DSA:1.10.10.60 208 311 5.1E-27 T 14-10-2018 AMIS_59310 d4d3b7053d7961feac066fb5cc7336ea 311 SUPERFAMILY SSF46689 209 256 8.96E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_20940 62294388ec66fa5655e353109227ab2e 429 Gene3D G3DSA:3.30.420.280 218 406 5.5E-36 T 14-10-2018 AMIS_20940 62294388ec66fa5655e353109227ab2e 429 Gene3D G3DSA:3.40.50.300 17 217 6.4E-29 T 14-10-2018 AMIS_20940 62294388ec66fa5655e353109227ab2e 429 Pfam PF03237 Terminase-like family 29 225 8.4E-11 T 14-10-2018 IPR004921 Terminase large subunit, T4likevirus-type AMIS_20940 62294388ec66fa5655e353109227ab2e 429 TIGRFAM TIGR01547 phage_term_2: phage terminase, large subunit, PBSX family 27 400 2.3E-31 T 14-10-2018 IPR006437 Bacteriophage terminase, large subunit GO:0006323 AMIS_56870 b57763d4cfba2be4318ba8200a2e3352 280 SMART SM00382 27 227 8.8E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_56870 b57763d4cfba2be4318ba8200a2e3352 280 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 227 249 2.0E-13 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AMIS_56870 b57763d4cfba2be4318ba8200a2e3352 280 SUPERFAMILY SSF52540 3 249 1.7E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_56870 b57763d4cfba2be4318ba8200a2e3352 280 Pfam PF00005 ABC transporter 19 178 2.3E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_56870 b57763d4cfba2be4318ba8200a2e3352 280 Gene3D G3DSA:3.40.50.300 1 254 5.0E-64 T 14-10-2018 AMIS_32620 c78e31f580e87bf1cdac61aaa9982215 403 SUPERFAMILY SSF47203 240 396 5.64E-45 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMIS_32620 c78e31f580e87bf1cdac61aaa9982215 403 Gene3D G3DSA:1.10.540.10 6 127 5.1E-40 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMIS_32620 c78e31f580e87bf1cdac61aaa9982215 403 SUPERFAMILY SSF56645 12 255 5.1E-59 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMIS_32620 c78e31f580e87bf1cdac61aaa9982215 403 Gene3D G3DSA:1.20.140.10 243 399 8.6E-41 T 14-10-2018 AMIS_32620 c78e31f580e87bf1cdac61aaa9982215 403 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 130 229 9.6E-20 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMIS_32620 c78e31f580e87bf1cdac61aaa9982215 403 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 13 125 1.8E-7 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMIS_32620 c78e31f580e87bf1cdac61aaa9982215 403 Gene3D G3DSA:2.40.110.10 129 242 5.2E-47 T 14-10-2018 AMIS_32620 c78e31f580e87bf1cdac61aaa9982215 403 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 242 392 2.2E-37 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMIS_77130 5139b86f5093a0d5e82e18e21893006b 730 Gene3D G3DSA:1.10.8.60 637 709 2.5E-87 T 14-10-2018 AMIS_77130 5139b86f5093a0d5e82e18e21893006b 730 ProSitePatterns PS00674 AAA-protein family signature. 606 624 - T 14-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 AMIS_77130 5139b86f5093a0d5e82e18e21893006b 730 SMART SM00382 244 373 0.0017 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_77130 5139b86f5093a0d5e82e18e21893006b 730 SMART SM00382 501 638 1.6E-20 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_77130 5139b86f5093a0d5e82e18e21893006b 730 Gene3D G3DSA:2.40.40.20 2 89 1.8E-9 T 14-10-2018 AMIS_77130 5139b86f5093a0d5e82e18e21893006b 730 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 505 635 6.0E-43 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMIS_77130 5139b86f5093a0d5e82e18e21893006b 730 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 248 370 3.2E-11 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMIS_77130 5139b86f5093a0d5e82e18e21893006b 730 SMART SM01073 6 90 2.6E-15 T 14-10-2018 IPR003338 CDC48, N-terminal subdomain AMIS_77130 5139b86f5093a0d5e82e18e21893006b 730 Gene3D G3DSA:3.40.50.300 198 372 9.7E-22 T 14-10-2018 AMIS_77130 5139b86f5093a0d5e82e18e21893006b 730 Pfam PF02359 Cell division protein 48 (CDC48), N-terminal domain 16 89 1.3E-10 T 14-10-2018 IPR003338 CDC48, N-terminal subdomain AMIS_77130 5139b86f5093a0d5e82e18e21893006b 730 SUPERFAMILY SSF52540 464 719 2.03E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_77130 5139b86f5093a0d5e82e18e21893006b 730 Gene3D G3DSA:3.40.50.300 466 720 2.5E-87 T 14-10-2018 AMIS_77130 5139b86f5093a0d5e82e18e21893006b 730 SUPERFAMILY SSF52540 209 449 5.05E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_77130 5139b86f5093a0d5e82e18e21893006b 730 SUPERFAMILY SSF50692 16 88 2.49E-10 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily AMIS_77130 5139b86f5093a0d5e82e18e21893006b 730 Gene3D G3DSA:1.10.8.60 373 465 5.9E-18 T 14-10-2018 AMIS_74780 2b5b618d3d85d70819c1b72ce0d984cd 373 Hamap MF_00540 Adenosine deaminase [add]. 7 364 54.134 T 14-10-2018 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217 AMIS_74780 2b5b618d3d85d70819c1b72ce0d984cd 373 SUPERFAMILY SSF51556 8 360 6.13E-76 T 14-10-2018 IPR032466 Metal-dependent hydrolase AMIS_74780 2b5b618d3d85d70819c1b72ce0d984cd 373 Gene3D G3DSA:3.20.20.140 8 370 2.6E-102 T 14-10-2018 AMIS_74780 2b5b618d3d85d70819c1b72ce0d984cd 373 Pfam PF00962 Adenosine/AMP deaminase 12 361 1.1E-88 T 14-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 AMIS_63770 11961c6c526f74d314735a84bc348886 515 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 4 514 5.3E-237 T 14-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AMIS_63770 11961c6c526f74d314735a84bc348886 515 PIRSF PIRSF001363 1 515 2.8E-235 T 14-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AMIS_63770 11961c6c526f74d314735a84bc348886 515 SUPERFAMILY SSF51645 3 514 5.36E-183 T 14-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AMIS_63770 11961c6c526f74d314735a84bc348886 515 Gene3D G3DSA:1.20.1220.12 395 515 1.1E-46 T 14-10-2018 AMIS_63770 11961c6c526f74d314735a84bc348886 515 Gene3D G3DSA:3.20.20.360 1 390 2.4E-183 T 14-10-2018 AMIS_63770 11961c6c526f74d314735a84bc348886 515 Pfam PF01274 Malate synthase 2 514 8.3E-198 T 14-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AMIS_1360 3224ff10c2c43d7ae9ec3b5de6469a3c 497 PRINTS PR00313 NodO calcium binding signature 242 250 7.6E-10 T 14-10-2018 AMIS_1360 3224ff10c2c43d7ae9ec3b5de6469a3c 497 PRINTS PR00313 NodO calcium binding signature 278 287 7.6E-10 T 14-10-2018 AMIS_1360 3224ff10c2c43d7ae9ec3b5de6469a3c 497 PRINTS PR00313 NodO calcium binding signature 140 151 7.6E-10 T 14-10-2018 AMIS_1360 3224ff10c2c43d7ae9ec3b5de6469a3c 497 PRINTS PR00313 NodO calcium binding signature 206 214 7.6E-10 T 14-10-2018 AMIS_1360 3224ff10c2c43d7ae9ec3b5de6469a3c 497 SUPERFAMILY SSF51120 102 185 2.09E-19 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_1360 3224ff10c2c43d7ae9ec3b5de6469a3c 497 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 229 247 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site AMIS_1360 3224ff10c2c43d7ae9ec3b5de6469a3c 497 Gene3D G3DSA:2.150.10.10 220 261 3.0E-11 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_1360 3224ff10c2c43d7ae9ec3b5de6469a3c 497 Gene3D G3DSA:2.150.10.10 172 219 3.4E-14 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_1360 3224ff10c2c43d7ae9ec3b5de6469a3c 497 SUPERFAMILY SSF51120 294 439 9.42E-26 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_1360 3224ff10c2c43d7ae9ec3b5de6469a3c 497 Gene3D G3DSA:2.150.10.10 310 363 6.7E-14 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_1360 3224ff10c2c43d7ae9ec3b5de6469a3c 497 Gene3D G3DSA:2.150.10.10 364 456 5.1E-9 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_1360 3224ff10c2c43d7ae9ec3b5de6469a3c 497 Gene3D G3DSA:2.150.10.10 262 309 1.1E-11 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_1360 3224ff10c2c43d7ae9ec3b5de6469a3c 497 Gene3D G3DSA:2.150.10.10 28 171 2.1E-15 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_1360 3224ff10c2c43d7ae9ec3b5de6469a3c 497 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 367 383 0.49 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_1360 3224ff10c2c43d7ae9ec3b5de6469a3c 497 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 349 365 0.066 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_1360 3224ff10c2c43d7ae9ec3b5de6469a3c 497 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 143 158 0.014 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_1360 3224ff10c2c43d7ae9ec3b5de6469a3c 497 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 404 418 43.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_1360 3224ff10c2c43d7ae9ec3b5de6469a3c 497 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 278 294 0.016 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_1360 3224ff10c2c43d7ae9ec3b5de6469a3c 497 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 242 258 0.017 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_1360 3224ff10c2c43d7ae9ec3b5de6469a3c 497 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 206 221 0.0024 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_1360 3224ff10c2c43d7ae9ec3b5de6469a3c 497 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 296 311 0.21 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_1360 3224ff10c2c43d7ae9ec3b5de6469a3c 497 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 223 239 0.013 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_1360 3224ff10c2c43d7ae9ec3b5de6469a3c 497 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 160 177 0.0015 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_1360 3224ff10c2c43d7ae9ec3b5de6469a3c 497 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 385 402 0.053 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_1360 3224ff10c2c43d7ae9ec3b5de6469a3c 497 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 332 348 6.0E-4 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_1360 3224ff10c2c43d7ae9ec3b5de6469a3c 497 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 314 330 0.0028 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_1360 3224ff10c2c43d7ae9ec3b5de6469a3c 497 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 124 141 0.0043 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_1360 3224ff10c2c43d7ae9ec3b5de6469a3c 497 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 187 204 0.0024 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_1360 3224ff10c2c43d7ae9ec3b5de6469a3c 497 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 260 276 0.029 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_1360 3224ff10c2c43d7ae9ec3b5de6469a3c 497 SUPERFAMILY SSF51120 167 311 4.19E-27 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_56520 90dd8c4d2ea4794f38cb1af202d90073 313 Pfam PF04909 Amidohydrolase 53 303 1.6E-58 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AMIS_56520 90dd8c4d2ea4794f38cb1af202d90073 313 Gene3D G3DSA:3.20.20.140 53 304 9.5E-64 T 14-10-2018 AMIS_56520 90dd8c4d2ea4794f38cb1af202d90073 313 SUPERFAMILY SSF51556 28 303 3.58E-68 T 14-10-2018 IPR032466 Metal-dependent hydrolase AMIS_12620 159805b97f78de28225e9f9ef1b0aa73 485 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 248 437 8.1E-67 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AMIS_12620 159805b97f78de28225e9f9ef1b0aa73 485 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 239 1.3E-70 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AMIS_12620 159805b97f78de28225e9f9ef1b0aa73 485 PIRSF PIRSF000538 3 485 3.2E-161 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AMIS_12620 159805b97f78de28225e9f9ef1b0aa73 485 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 130 142 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AMIS_12620 159805b97f78de28225e9f9ef1b0aa73 485 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 4 483 6.7E-213 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 AMIS_12620 159805b97f78de28225e9f9ef1b0aa73 485 Gene3D G3DSA:3.30.420.40 1 240 9.2E-102 T 14-10-2018 AMIS_12620 159805b97f78de28225e9f9ef1b0aa73 485 SUPERFAMILY SSF53067 5 242 7.26E-87 T 14-10-2018 AMIS_12620 159805b97f78de28225e9f9ef1b0aa73 485 Hamap MF_00186 Glycerol kinase [glpK]. 2 484 52.641 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 AMIS_12620 159805b97f78de28225e9f9ef1b0aa73 485 Gene3D G3DSA:3.30.420.40 241 485 5.3E-91 T 14-10-2018 AMIS_12620 159805b97f78de28225e9f9ef1b0aa73 485 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 349 369 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AMIS_12620 159805b97f78de28225e9f9ef1b0aa73 485 SUPERFAMILY SSF53067 242 484 2.85E-82 T 14-10-2018 AMIS_10170 71c63a96ff21c7aec35bcf5cd5d47d2e 324 Pfam PF13280 WYL domain 147 317 1.2E-26 T 14-10-2018 IPR026881 WYL domain AMIS_10170 71c63a96ff21c7aec35bcf5cd5d47d2e 324 ProSitePatterns PS00894 DeoR-type HTH domain signature. 12 46 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AMIS_10170 71c63a96ff21c7aec35bcf5cd5d47d2e 324 Gene3D G3DSA:1.10.10.10 8 70 1.8E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_10170 71c63a96ff21c7aec35bcf5cd5d47d2e 324 Pfam PF08279 HTH domain 12 67 2.3E-15 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 AMIS_10170 71c63a96ff21c7aec35bcf5cd5d47d2e 324 PIRSF PIRSF016838 4 322 3.0E-21 T 14-10-2018 IPR028349 Protein PafC AMIS_10170 71c63a96ff21c7aec35bcf5cd5d47d2e 324 SUPERFAMILY SSF46785 10 65 9.1E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_48340 986de2394e336835f3aaa2f329b46df4 417 SUPERFAMILY SSF56059 106 269 2.91E-9 T 14-10-2018 AMIS_48340 986de2394e336835f3aaa2f329b46df4 417 Gene3D G3DSA:3.30.1490.20 106 204 3.0E-7 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AMIS_58380 f0b98f093d607083e72b6fe708edeba3 619 SUPERFAMILY SSF50447 233 345 2.65E-28 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AMIS_58380 f0b98f093d607083e72b6fe708edeba3 619 Pfam PF14492 Elongation Factor G, domain II 347 420 1.5E-24 T 14-10-2018 AMIS_58380 f0b98f093d607083e72b6fe708edeba3 619 SMART SM00889 423 541 9.7E-51 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AMIS_58380 f0b98f093d607083e72b6fe708edeba3 619 Pfam PF03764 Elongation factor G, domain IV 422 540 2.7E-38 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AMIS_58380 f0b98f093d607083e72b6fe708edeba3 619 SUPERFAMILY SSF54980 348 424 2.3E-17 T 14-10-2018 IPR035647 EF-G domain III/V-like AMIS_58380 f0b98f093d607083e72b6fe708edeba3 619 PRINTS PR00315 GTP-binding elongation factor signature 5 18 7.0E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_58380 f0b98f093d607083e72b6fe708edeba3 619 PRINTS PR00315 GTP-binding elongation factor signature 87 98 7.0E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_58380 f0b98f093d607083e72b6fe708edeba3 619 PRINTS PR00315 GTP-binding elongation factor signature 123 132 7.0E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_58380 f0b98f093d607083e72b6fe708edeba3 619 PRINTS PR00315 GTP-binding elongation factor signature 71 81 7.0E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_58380 f0b98f093d607083e72b6fe708edeba3 619 PRINTS PR00315 GTP-binding elongation factor signature 51 59 7.0E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_58380 f0b98f093d607083e72b6fe708edeba3 619 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 2 173 1.3E-30 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AMIS_58380 f0b98f093d607083e72b6fe708edeba3 619 SUPERFAMILY SSF54980 544 618 6.47E-18 T 14-10-2018 IPR035647 EF-G domain III/V-like AMIS_58380 f0b98f093d607083e72b6fe708edeba3 619 Pfam PF00679 Elongation factor G C-terminus 544 618 1.8E-18 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like AMIS_58380 f0b98f093d607083e72b6fe708edeba3 619 Pfam PF00009 Elongation factor Tu GTP binding domain 2 248 7.3E-62 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_58380 f0b98f093d607083e72b6fe708edeba3 619 SMART SM00838 543 618 1.6E-16 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like AMIS_58380 f0b98f093d607083e72b6fe708edeba3 619 Gene3D G3DSA:3.30.70.870 349 426 3.9E-24 T 14-10-2018 AMIS_58380 f0b98f093d607083e72b6fe708edeba3 619 Gene3D G3DSA:3.30.70.240 547 613 5.0E-65 T 14-10-2018 AMIS_58380 f0b98f093d607083e72b6fe708edeba3 619 Gene3D G3DSA:3.40.50.300 1 254 1.8E-91 T 14-10-2018 AMIS_58380 f0b98f093d607083e72b6fe708edeba3 619 SUPERFAMILY SSF52540 2 248 4.81E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_58380 f0b98f093d607083e72b6fe708edeba3 619 Pfam PF03144 Elongation factor Tu domain 2 267 334 9.8E-12 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AMIS_58380 f0b98f093d607083e72b6fe708edeba3 619 Gene3D G3DSA:2.40.30.10 255 346 1.4E-25 T 14-10-2018 AMIS_58380 f0b98f093d607083e72b6fe708edeba3 619 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 222 244 6.6E-8 T 14-10-2018 AMIS_58380 f0b98f093d607083e72b6fe708edeba3 619 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 463 477 6.6E-8 T 14-10-2018 AMIS_58380 f0b98f093d607083e72b6fe708edeba3 619 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 109 132 6.6E-8 T 14-10-2018 AMIS_58380 f0b98f093d607083e72b6fe708edeba3 619 Gene3D G3DSA:3.30.230.10 435 618 5.0E-65 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMIS_58380 f0b98f093d607083e72b6fe708edeba3 619 SUPERFAMILY SSF54211 422 540 6.32E-31 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMIS_58380 f0b98f093d607083e72b6fe708edeba3 619 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site AMIS_69020 40eaa2ded4333d5ee8253a2f01335f47 293 Pfam PF03466 LysR substrate binding domain 89 286 6.6E-34 T 14-10-2018 IPR005119 LysR, substrate-binding AMIS_69020 40eaa2ded4333d5ee8253a2f01335f47 293 Gene3D G3DSA:3.40.190.10 179 259 2.4E-14 T 14-10-2018 AMIS_69020 40eaa2ded4333d5ee8253a2f01335f47 293 SUPERFAMILY SSF53850 91 290 1.49E-31 T 14-10-2018 AMIS_69020 40eaa2ded4333d5ee8253a2f01335f47 293 Gene3D G3DSA:3.40.190.10 82 175 5.4E-18 T 14-10-2018 AMIS_69020 40eaa2ded4333d5ee8253a2f01335f47 293 SUPERFAMILY SSF46785 1 108 2.36E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_69020 40eaa2ded4333d5ee8253a2f01335f47 293 Gene3D G3DSA:1.10.10.10 2 81 2.8E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_69020 40eaa2ded4333d5ee8253a2f01335f47 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 4.4E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_69020 40eaa2ded4333d5ee8253a2f01335f47 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_69020 40eaa2ded4333d5ee8253a2f01335f47 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_69020 40eaa2ded4333d5ee8253a2f01335f47 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_13530 9b12a40edb667b7064479be7c5fc8054 141 Pfam PF03994 Domain of Unknown Function (DUF350) 15 69 1.3E-15 T 14-10-2018 IPR007140 Protein of unknown function DUF350 AMIS_13530 9b12a40edb667b7064479be7c5fc8054 141 Pfam PF03994 Domain of Unknown Function (DUF350) 86 140 1.1E-13 T 14-10-2018 IPR007140 Protein of unknown function DUF350 AMIS_67990 1fc237e15d24b540fcc6e8cb3c5a7892 331 Gene3D G3DSA:3.20.20.70 20 326 2.2E-97 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_67990 1fc237e15d24b540fcc6e8cb3c5a7892 331 TIGRFAM TIGR00433 bioB: biotin synthase 29 322 1.1E-104 T 14-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AMIS_67990 1fc237e15d24b540fcc6e8cb3c5a7892 331 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 232 320 2.3E-11 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AMIS_67990 1fc237e15d24b540fcc6e8cb3c5a7892 331 SMART SM00729 57 267 3.2E-34 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AMIS_67990 1fc237e15d24b540fcc6e8cb3c5a7892 331 SUPERFAMILY SSF102114 16 315 4.32E-67 T 14-10-2018 AMIS_67990 1fc237e15d24b540fcc6e8cb3c5a7892 331 SMART SM00876 232 324 2.2E-28 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AMIS_67990 1fc237e15d24b540fcc6e8cb3c5a7892 331 PIRSF PIRSF001619 3 330 8.4E-106 T 14-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AMIS_67990 1fc237e15d24b540fcc6e8cb3c5a7892 331 Hamap MF_01694 Biotin synthase [bioB]. 17 325 37.86 T 14-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AMIS_67990 1fc237e15d24b540fcc6e8cb3c5a7892 331 Pfam PF04055 Radical SAM superfamily 64 221 2.2E-14 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMIS_3300 57b1e67faa7fc56387a7040267e1e6e5 432 PIRSF PIRSF000136 1 432 1.8E-106 T 14-10-2018 IPR010031 L-gulonolactone/D-arabinono-1,4-lactone oxidase GO:0016899|GO:0055114 AMIS_3300 57b1e67faa7fc56387a7040267e1e6e5 432 SUPERFAMILY SSF56176 4 181 1.03E-41 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AMIS_3300 57b1e67faa7fc56387a7040267e1e6e5 432 Pfam PF04030 D-arabinono-1,4-lactone oxidase 175 429 2.0E-71 T 14-10-2018 IPR007173 D-arabinono-1,4-lactone oxidase GO:0003885|GO:0016020|GO:0055114 AMIS_3300 57b1e67faa7fc56387a7040267e1e6e5 432 TIGRFAM TIGR01679 bact_FAD_ox: FAD-linked oxidoreductase 10 431 9.7E-116 T 14-10-2018 AMIS_3300 57b1e67faa7fc56387a7040267e1e6e5 432 Pfam PF01565 FAD binding domain 23 152 3.4E-23 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AMIS_3300 57b1e67faa7fc56387a7040267e1e6e5 432 Gene3D G3DSA:3.30.465.10 78 193 9.0E-39 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AMIS_3300 57b1e67faa7fc56387a7040267e1e6e5 432 Gene3D G3DSA:1.10.45.10 394 431 2.2E-10 T 14-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AMIS_3300 57b1e67faa7fc56387a7040267e1e6e5 432 Gene3D G3DSA:3.30.70.2520 301 392 4.8E-22 T 14-10-2018 AMIS_3300 57b1e67faa7fc56387a7040267e1e6e5 432 Gene3D G3DSA:3.30.43.10 5 72 1.6E-15 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 AMIS_29030 806ca32ced36f88fe441e9ce47354bfd 141 Gene3D G3DSA:1.10.10.10 6 140 9.3E-44 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_29030 806ca32ced36f88fe441e9ce47354bfd 141 SUPERFAMILY SSF46785 10 136 1.01E-34 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_29030 806ca32ced36f88fe441e9ce47354bfd 141 Pfam PF01638 HxlR-like helix-turn-helix 21 108 1.9E-24 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type AMIS_72730 c0a0dbe19304903cb156a8f2479b2b74 527 Gene3D G3DSA:1.10.287.130 281 354 1.7E-23 T 14-10-2018 AMIS_72730 c0a0dbe19304903cb156a8f2479b2b74 527 SMART SM00304 193 251 2.0E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_72730 c0a0dbe19304903cb156a8f2479b2b74 527 Pfam PF00672 HAMP domain 198 247 4.1E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_72730 c0a0dbe19304903cb156a8f2479b2b74 527 Gene3D G3DSA:1.20.1480.50 161 257 5.9E-6 T 14-10-2018 AMIS_72730 c0a0dbe19304903cb156a8f2479b2b74 527 PRINTS PR00344 Bacterial sensor protein C-terminal signature 500 513 1.2E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_72730 c0a0dbe19304903cb156a8f2479b2b74 527 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 451 1.2E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_72730 c0a0dbe19304903cb156a8f2479b2b74 527 PRINTS PR00344 Bacterial sensor protein C-terminal signature 476 494 1.2E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_72730 c0a0dbe19304903cb156a8f2479b2b74 527 SUPERFAMILY SSF55874 343 517 8.38E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_72730 c0a0dbe19304903cb156a8f2479b2b74 527 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 399 513 5.3E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_72730 c0a0dbe19304903cb156a8f2479b2b74 527 Gene3D G3DSA:3.30.565.10 360 515 1.6E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_72730 c0a0dbe19304903cb156a8f2479b2b74 527 SMART SM00388 287 354 2.0E-21 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_72730 c0a0dbe19304903cb156a8f2479b2b74 527 SMART SM00387 399 516 9.2E-38 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_72730 c0a0dbe19304903cb156a8f2479b2b74 527 SUPERFAMILY SSF158472 195 248 2.48E-5 T 14-10-2018 AMIS_72730 c0a0dbe19304903cb156a8f2479b2b74 527 SUPERFAMILY SSF47384 278 354 8.24E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_72730 c0a0dbe19304903cb156a8f2479b2b74 527 Pfam PF00512 His Kinase A (phospho-acceptor) domain 288 353 2.3E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_22480 4e0cb8985c1aca74ef8023ecf38644ab 600 SMART SM00065 299 443 4.6E-8 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_22480 4e0cb8985c1aca74ef8023ecf38644ab 600 Gene3D G3DSA:3.30.450.20 180 286 2.0E-8 T 14-10-2018 AMIS_22480 4e0cb8985c1aca74ef8023ecf38644ab 600 SMART SM00267 435 592 3.6E-52 T 14-10-2018 IPR000160 GGDEF domain AMIS_22480 4e0cb8985c1aca74ef8023ecf38644ab 600 Pfam PF00990 Diguanylate cyclase, GGDEF domain 446 587 3.4E-35 T 14-10-2018 IPR000160 GGDEF domain AMIS_22480 4e0cb8985c1aca74ef8023ecf38644ab 600 SUPERFAMILY SSF55781 305 446 6.76E-19 T 14-10-2018 AMIS_22480 4e0cb8985c1aca74ef8023ecf38644ab 600 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 182 227 5.2E-6 T 14-10-2018 IPR000014 PAS domain AMIS_22480 4e0cb8985c1aca74ef8023ecf38644ab 600 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 442 590 5.7E-33 T 14-10-2018 IPR000160 GGDEF domain AMIS_22480 4e0cb8985c1aca74ef8023ecf38644ab 600 SMART SM00091 182 247 9.3E-5 T 14-10-2018 IPR000014 PAS domain AMIS_22480 4e0cb8985c1aca74ef8023ecf38644ab 600 Gene3D G3DSA:3.30.450.40 300 444 1.3E-20 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_22480 4e0cb8985c1aca74ef8023ecf38644ab 600 Gene3D G3DSA:3.30.70.270 445 593 5.4E-45 T 14-10-2018 AMIS_22480 4e0cb8985c1aca74ef8023ecf38644ab 600 SUPERFAMILY SSF55073 451 590 2.43E-40 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_22480 4e0cb8985c1aca74ef8023ecf38644ab 600 SUPERFAMILY SSF55785 169 256 2.62E-11 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_22480 4e0cb8985c1aca74ef8023ecf38644ab 600 Pfam PF13185 GAF domain 312 434 1.6E-9 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_22480 4e0cb8985c1aca74ef8023ecf38644ab 600 Pfam PF13188 PAS domain 183 236 3.7E-8 T 14-10-2018 IPR000014 PAS domain AMIS_62170 d2b20f72be4193b27ec1c3a58f57780e 306 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 3 145 1.1E-41 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 AMIS_62170 d2b20f72be4193b27ec1c3a58f57780e 306 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMIS_62170 d2b20f72be4193b27ec1c3a58f57780e 306 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 2 305 41.233 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AMIS_62170 d2b20f72be4193b27ec1c3a58f57780e 306 PRINTS PR00101 Aspartate carbamoyltransferase signature 260 265 9.0E-32 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AMIS_62170 d2b20f72be4193b27ec1c3a58f57780e 306 PRINTS PR00101 Aspartate carbamoyltransferase signature 132 149 9.0E-32 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AMIS_62170 d2b20f72be4193b27ec1c3a58f57780e 306 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 9.0E-32 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AMIS_62170 d2b20f72be4193b27ec1c3a58f57780e 306 PRINTS PR00101 Aspartate carbamoyltransferase signature 77 86 9.0E-32 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AMIS_62170 d2b20f72be4193b27ec1c3a58f57780e 306 PRINTS PR00101 Aspartate carbamoyltransferase signature 284 298 9.0E-32 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AMIS_62170 d2b20f72be4193b27ec1c3a58f57780e 306 PRINTS PR00101 Aspartate carbamoyltransferase signature 219 228 9.0E-32 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AMIS_62170 d2b20f72be4193b27ec1c3a58f57780e 306 SUPERFAMILY SSF53671 2 305 5.63E-99 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AMIS_62170 d2b20f72be4193b27ec1c3a58f57780e 306 Gene3D G3DSA:3.40.50.1370 7 298 1.8E-97 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AMIS_62170 d2b20f72be4193b27ec1c3a58f57780e 306 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 3 303 9.6E-99 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AMIS_62170 d2b20f72be4193b27ec1c3a58f57780e 306 Gene3D G3DSA:3.40.50.1370 133 282 1.8E-97 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AMIS_62170 d2b20f72be4193b27ec1c3a58f57780e 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 7.2E-22 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMIS_62170 d2b20f72be4193b27ec1c3a58f57780e 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 256 265 7.2E-22 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMIS_62170 d2b20f72be4193b27ec1c3a58f57780e 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 133 144 7.2E-22 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMIS_62170 d2b20f72be4193b27ec1c3a58f57780e 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 291 7.2E-22 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMIS_62170 d2b20f72be4193b27ec1c3a58f57780e 306 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 152 302 4.2E-29 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 AMIS_15920 b973a285442b388daca9cbde1f92f366 620 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 7 611 8.8E-281 T 14-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 AMIS_15920 b973a285442b388daca9cbde1f92f366 620 PRINTS PR00315 GTP-binding elongation factor signature 130 139 3.0E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_15920 b973a285442b388daca9cbde1f92f366 620 PRINTS PR00315 GTP-binding elongation factor signature 53 61 3.0E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_15920 b973a285442b388daca9cbde1f92f366 620 PRINTS PR00315 GTP-binding elongation factor signature 78 88 3.0E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_15920 b973a285442b388daca9cbde1f92f366 620 PRINTS PR00315 GTP-binding elongation factor signature 9 22 3.0E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_15920 b973a285442b388daca9cbde1f92f366 620 PRINTS PR00315 GTP-binding elongation factor signature 94 105 3.0E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_15920 b973a285442b388daca9cbde1f92f366 620 SUPERFAMILY SSF54980 412 526 9.59E-28 T 14-10-2018 IPR035647 EF-G domain III/V-like AMIS_15920 b973a285442b388daca9cbde1f92f366 620 Pfam PF03144 Elongation factor Tu domain 2 232 302 8.3E-12 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AMIS_15920 b973a285442b388daca9cbde1f92f366 620 Gene3D G3DSA:2.40.30.10 213 312 4.0E-30 T 14-10-2018 AMIS_15920 b973a285442b388daca9cbde1f92f366 620 SUPERFAMILY SSF52540 4 218 6.85E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_15920 b973a285442b388daca9cbde1f92f366 620 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 149 2.9E-23 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AMIS_15920 b973a285442b388daca9cbde1f92f366 620 SUPERFAMILY SSF50447 159 312 6.03E-32 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AMIS_15920 b973a285442b388daca9cbde1f92f366 620 Gene3D G3DSA:2.40.50.250 496 611 1.0E-118 T 14-10-2018 AMIS_15920 b973a285442b388daca9cbde1f92f366 620 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 46 61 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site AMIS_15920 b973a285442b388daca9cbde1f92f366 620 Gene3D G3DSA:3.30.70.240 403 495 1.0E-118 T 14-10-2018 AMIS_15920 b973a285442b388daca9cbde1f92f366 620 Gene3D G3DSA:3.40.50.300 5 211 1.6E-59 T 14-10-2018 AMIS_15920 b973a285442b388daca9cbde1f92f366 620 Pfam PF00009 Elongation factor Tu GTP binding domain 7 205 2.7E-51 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_15920 b973a285442b388daca9cbde1f92f366 620 SUPERFAMILY SSF54980 315 401 1.25E-10 T 14-10-2018 IPR035647 EF-G domain III/V-like AMIS_15920 b973a285442b388daca9cbde1f92f366 620 Pfam PF00679 Elongation factor G C-terminus 410 492 3.3E-20 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like AMIS_15920 b973a285442b388daca9cbde1f92f366 620 Gene3D G3DSA:3.30.70.870 320 603 1.0E-118 T 14-10-2018 AMIS_52890 a559e7c459829ec2735041b9f71a1d7c 340 Gene3D G3DSA:1.10.3470.10 11 338 2.0E-97 T 14-10-2018 IPR037294 ABC transporter, BtuC-like AMIS_52890 a559e7c459829ec2735041b9f71a1d7c 340 Pfam PF01032 FecCD transport family 26 334 1.2E-93 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AMIS_52890 a559e7c459829ec2735041b9f71a1d7c 340 SUPERFAMILY SSF81345 13 334 5.75E-81 T 14-10-2018 IPR037294 ABC transporter, BtuC-like AMIS_66800 7d97322fc2e1cdf6d91a4c6185b9a0de 328 PIRSF PIRSF002849 3 325 3.9E-127 T 14-10-2018 AMIS_66800 7d97322fc2e1cdf6d91a4c6185b9a0de 328 SUPERFAMILY SSF52540 19 295 2.76E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_66800 7d97322fc2e1cdf6d91a4c6185b9a0de 328 Gene3D G3DSA:3.40.50.300 9 199 6.8E-48 T 14-10-2018 AMIS_66800 7d97322fc2e1cdf6d91a4c6185b9a0de 328 Gene3D G3DSA:1.10.8.300 203 320 3.7E-34 T 14-10-2018 AMIS_66800 7d97322fc2e1cdf6d91a4c6185b9a0de 328 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 44 174 1.8E-64 T 14-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 AMIS_25730 0efc9d7d8363d3aee1599b0b20b28f14 915 Gene3D G3DSA:1.10.10.10 804 914 4.4E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_25730 0efc9d7d8363d3aee1599b0b20b28f14 915 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 872 888 5.9E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_25730 0efc9d7d8363d3aee1599b0b20b28f14 915 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 888 900 5.9E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_25730 0efc9d7d8363d3aee1599b0b20b28f14 915 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 858 872 5.9E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_25730 0efc9d7d8363d3aee1599b0b20b28f14 915 Pfam PF13191 AAA ATPase domain 17 174 8.7E-18 T 14-10-2018 AMIS_25730 0efc9d7d8363d3aee1599b0b20b28f14 915 Gene3D G3DSA:3.40.50.300 10 181 8.9E-6 T 14-10-2018 AMIS_25730 0efc9d7d8363d3aee1599b0b20b28f14 915 SUPERFAMILY SSF52540 15 237 1.77E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_25730 0efc9d7d8363d3aee1599b0b20b28f14 915 SUPERFAMILY SSF46894 854 910 2.79E-14 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_25730 0efc9d7d8363d3aee1599b0b20b28f14 915 Pfam PF00196 Bacterial regulatory proteins, luxR family 857 910 7.9E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_25730 0efc9d7d8363d3aee1599b0b20b28f14 915 SMART SM00421 855 912 1.0E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_47950 66e5f219a7fb556a770288656714b580 371 SUPERFAMILY SSF50129 28 189 2.6E-22 T 14-10-2018 IPR011032 GroES-like superfamily AMIS_47950 66e5f219a7fb556a770288656714b580 371 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 39 152 4.4E-15 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMIS_47950 66e5f219a7fb556a770288656714b580 371 SUPERFAMILY SSF51735 159 324 5.17E-18 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_47950 66e5f219a7fb556a770288656714b580 371 Gene3D G3DSA:3.40.50.720 169 306 7.4E-61 T 14-10-2018 AMIS_47950 66e5f219a7fb556a770288656714b580 371 Pfam PF00107 Zinc-binding dehydrogenase 217 322 6.3E-13 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMIS_47950 66e5f219a7fb556a770288656714b580 371 Gene3D G3DSA:3.90.180.10 37 347 7.4E-61 T 14-10-2018 AMIS_19100 065371748776470057bd7beb5ad6fc59 336 Hamap MF_01656 4-hydroxy-2-oxovalerate aldolase [mhpE]. 1 336 169.971 T 14-10-2018 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 AMIS_19100 065371748776470057bd7beb5ad6fc59 336 SUPERFAMILY SSF89000 287 334 3.41E-13 T 14-10-2018 AMIS_19100 065371748776470057bd7beb5ad6fc59 336 Gene3D G3DSA:3.20.20.70 2 267 4.1E-90 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_19100 065371748776470057bd7beb5ad6fc59 336 Pfam PF00682 HMGL-like 5 263 2.3E-49 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 AMIS_19100 065371748776470057bd7beb5ad6fc59 336 Pfam PF07836 DmpG-like communication domain 272 333 1.2E-26 T 14-10-2018 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 AMIS_19100 065371748776470057bd7beb5ad6fc59 336 SUPERFAMILY SSF51569 2 266 2.34E-60 T 14-10-2018 AMIS_19100 065371748776470057bd7beb5ad6fc59 336 TIGRFAM TIGR03217 4OH_2_O_val_ald: 4-hydroxy-2-oxovalerate aldolase 5 335 1.8E-148 T 14-10-2018 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 AMIS_19100 065371748776470057bd7beb5ad6fc59 336 ProDom PD005364 ALDOLASE 4-HYDROXY-2-OXOVALERATE LYASE PYRUVATE 4.1.3.- PLASMID HMG-COA LYASE-LIKE TRANSFERASE HOA 274 332 2.0E-16 T 14-10-2018 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 AMIS_19100 065371748776470057bd7beb5ad6fc59 336 Gene3D G3DSA:1.10.8.60 274 336 3.9E-24 T 14-10-2018 AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 SUPERFAMILY SSF52777 1228 1493 8.12E-66 T 14-10-2018 AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 SUPERFAMILY SSF52777 17 194 1.0E-46 T 14-10-2018 AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 SUPERFAMILY SSF52777 3114 3267 3.0E-50 T 14-10-2018 AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 ProSitePatterns PS00455 Putative AMP-binding domain signature. 3682 3693 - T 14-10-2018 IPR020845 AMP-binding, conserved site AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 Gene3D G3DSA:3.30.559.30 3271 3516 2.0E-154 T 14-10-2018 AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 SUPERFAMILY SSF56801 1468 2016 9.42E-146 T 14-10-2018 AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 Gene3D G3DSA:3.30.559.30 198 442 2.6E-132 T 14-10-2018 AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 Gene3D G3DSA:1.10.1200.10 1995 2073 3.3E-25 T 14-10-2018 IPR036736 ACP-like superfamily AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 Gene3D G3DSA:1.10.1200.10 970 1049 4.1E-26 T 14-10-2018 IPR036736 ACP-like superfamily AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 SUPERFAMILY SSF47336 1995 2068 3.4E-18 T 14-10-2018 IPR036736 ACP-like superfamily AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 SUPERFAMILY SSF52777 3275 3540 4.89E-65 T 14-10-2018 AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 Pfam PF00550 Phosphopantetheine attachment site 2005 2067 1.0E-13 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 Pfam PF00550 Phosphopantetheine attachment site 981 1043 1.0E-13 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 Pfam PF00550 Phosphopantetheine attachment site 4052 4115 1.5E-14 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 Pfam PF00550 Phosphopantetheine attachment site 3028 3090 2.7E-14 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 Gene3D G3DSA:3.30.559.30 1224 1467 1.8E-153 T 14-10-2018 AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 ProSitePatterns PS00455 Putative AMP-binding domain signature. 614 625 - T 14-10-2018 IPR020845 AMP-binding, conserved site AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 Gene3D G3DSA:3.30.300.30 3941 4041 8.4E-31 T 14-10-2018 AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 Gene3D G3DSA:3.30.300.30 1894 1994 1.2E-29 T 14-10-2018 AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 Pfam PF00501 AMP-binding enzyme 2529 2922 8.0E-88 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 Pfam PF00501 AMP-binding enzyme 477 875 5.4E-82 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 Pfam PF00501 AMP-binding enzyme 1507 1899 2.6E-86 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 Pfam PF00501 AMP-binding enzyme 3553 3946 2.9E-87 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 SUPERFAMILY SSF52777 202 442 3.11E-54 T 14-10-2018 AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 SMART SM00823 Phosphopantetheine attachment site 3026 3095 4.1E-4 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 SMART SM00823 Phosphopantetheine attachment site 976 1048 0.0032 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 SMART SM00823 Phosphopantetheine attachment site 2003 2072 0.0037 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 SMART SM00823 Phosphopantetheine attachment site 4050 4119 0.0012 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 SUPERFAMILY SSF52777 2091 2244 4.34E-50 T 14-10-2018 AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 Gene3D G3DSA:3.30.559.10 2091 2439 1.7E-155 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 Gene3D G3DSA:3.30.559.30 2248 2492 1.7E-155 T 14-10-2018 AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 SUPERFAMILY SSF47336 3018 3091 1.44E-18 T 14-10-2018 IPR036736 ACP-like superfamily AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 Gene3D G3DSA:3.30.559.10 15 388 2.6E-132 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 3573 3970 3.1E-123 T 14-10-2018 IPR010071 Amino acid adenylation domain AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2549 2946 7.2E-125 T 14-10-2018 IPR010071 Amino acid adenylation domain AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 498 899 5.6E-118 T 14-10-2018 IPR010071 Amino acid adenylation domain AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1526 1923 7.5E-124 T 14-10-2018 IPR010071 Amino acid adenylation domain AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 SUPERFAMILY SSF52777 1067 1220 7.0E-50 T 14-10-2018 AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 Gene3D G3DSA:3.40.50.1820 4042 4141 2.0E-26 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 SUPERFAMILY SSF52777 2252 2516 5.67E-66 T 14-10-2018 AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 Pfam PF13193 AMP-binding enzyme C-terminal domain 1907 1978 2.4E-11 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 Pfam PF13193 AMP-binding enzyme C-terminal domain 3954 4025 1.5E-11 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 Pfam PF13193 AMP-binding enzyme C-terminal domain 883 954 1.8E-9 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 Pfam PF13193 AMP-binding enzyme C-terminal domain 2930 3001 2.9E-11 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 SUPERFAMILY SSF47336 4042 4116 2.62E-18 T 14-10-2018 IPR036736 ACP-like superfamily AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 Gene3D G3DSA:1.10.1200.10 3013 3099 1.3E-26 T 14-10-2018 IPR036736 ACP-like superfamily AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 SUPERFAMILY SSF47336 971 1044 1.96E-18 T 14-10-2018 IPR036736 ACP-like superfamily AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 Gene3D G3DSA:3.40.50.12780 3539 3940 6.5E-125 T 14-10-2018 AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 Gene3D G3DSA:3.40.50.12780 467 869 1.0E-116 T 14-10-2018 AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 Gene3D G3DSA:3.40.50.12780 1492 1893 8.4E-124 T 14-10-2018 AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 Gene3D G3DSA:3.40.50.12780 2515 2916 2.2E-125 T 14-10-2018 AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1635 1646 - T 14-10-2018 IPR020845 AMP-binding, conserved site AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2658 2669 - T 14-10-2018 IPR020845 AMP-binding, conserved site AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 Pfam PF00668 Condensation domain 1065 1486 8.0E-107 T 14-10-2018 IPR001242 Condensation domain AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 Pfam PF00668 Condensation domain 2089 2509 2.1E-108 T 14-10-2018 IPR001242 Condensation domain AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 Pfam PF00668 Condensation domain 13 458 7.3E-87 T 14-10-2018 IPR001242 Condensation domain AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 Pfam PF00668 Condensation domain 3112 3533 1.7E-108 T 14-10-2018 IPR001242 Condensation domain AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 SUPERFAMILY SSF56801 3513 4063 5.23E-148 T 14-10-2018 AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 Gene3D G3DSA:3.30.300.30 870 969 1.2E-28 T 14-10-2018 AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 Gene3D G3DSA:3.30.559.10 3114 3463 2.0E-154 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 Gene3D G3DSA:3.30.300.30 2918 3012 7.0E-30 T 14-10-2018 AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 SUPERFAMILY SSF56801 2489 3039 6.28E-150 T 14-10-2018 AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 SUPERFAMILY SSF56801 462 992 9.16E-134 T 14-10-2018 AMIS_49640 c766fdb620ecbdfe2946b0e407012bed 4154 Gene3D G3DSA:3.30.559.10 1067 1415 1.8E-153 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AMIS_34940 c5d23203898035820c946aa26d43021b 998 SMART SM00028 803 836 160.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_34940 c5d23203898035820c946aa26d43021b 998 SMART SM00028 719 752 340.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_34940 c5d23203898035820c946aa26d43021b 998 SMART SM00028 635 668 15.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_34940 c5d23203898035820c946aa26d43021b 998 SMART SM00028 887 920 270.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_34940 c5d23203898035820c946aa26d43021b 998 SMART SM00028 845 878 83.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_34940 c5d23203898035820c946aa26d43021b 998 SMART SM00028 677 710 120.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_34940 c5d23203898035820c946aa26d43021b 998 SMART SM00382 165 311 2.1E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_34940 c5d23203898035820c946aa26d43021b 998 Gene3D G3DSA:1.25.40.10 763 973 9.0E-51 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_34940 c5d23203898035820c946aa26d43021b 998 Pfam PF13374 Tetratricopeptide repeat 638 674 3.7E-5 T 14-10-2018 AMIS_34940 c5d23203898035820c946aa26d43021b 998 Gene3D G3DSA:3.40.50.300 134 290 4.4E-18 T 14-10-2018 AMIS_34940 c5d23203898035820c946aa26d43021b 998 Pfam PF13424 Tetratricopeptide repeat 678 737 8.7E-10 T 14-10-2018 AMIS_34940 c5d23203898035820c946aa26d43021b 998 Pfam PF13424 Tetratricopeptide repeat 845 918 2.3E-13 T 14-10-2018 AMIS_34940 c5d23203898035820c946aa26d43021b 998 Pfam PF13424 Tetratricopeptide repeat 766 835 1.0E-13 T 14-10-2018 AMIS_34940 c5d23203898035820c946aa26d43021b 998 SUPERFAMILY SSF48452 636 745 8.35E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_34940 c5d23203898035820c946aa26d43021b 998 SUPERFAMILY SSF48452 838 954 2.85E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_34940 c5d23203898035820c946aa26d43021b 998 Gene3D G3DSA:1.25.40.10 592 749 9.7E-25 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_34940 c5d23203898035820c946aa26d43021b 998 SUPERFAMILY SSF48452 712 833 6.5E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_34940 c5d23203898035820c946aa26d43021b 998 SUPERFAMILY SSF52540 149 352 1.35E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_72130 7e1e2c4f4c65e3ac92de8ad3c92a4a73 298 Gene3D G3DSA:3.40.50.300 1 136 2.3E-35 T 14-10-2018 AMIS_72130 7e1e2c4f4c65e3ac92de8ad3c92a4a73 298 SUPERFAMILY SSF52540 6 136 1.12E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_72130 7e1e2c4f4c65e3ac92de8ad3c92a4a73 298 SUPERFAMILY SSF56784 163 297 7.46E-23 T 14-10-2018 IPR036412 HAD-like superfamily AMIS_72130 7e1e2c4f4c65e3ac92de8ad3c92a4a73 298 Gene3D G3DSA:3.40.50.1000 163 298 5.6E-55 T 14-10-2018 IPR023214 HAD superfamily AMIS_72130 7e1e2c4f4c65e3ac92de8ad3c92a4a73 298 Pfam PF13671 AAA domain 4 134 1.9E-20 T 14-10-2018 AMIS_77500 b9b90b9b6dd859a88928d54dff9e1f19 132 SUPERFAMILY SSF50475 9 130 4.26E-26 T 14-10-2018 AMIS_77500 b9b90b9b6dd859a88928d54dff9e1f19 132 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 10 94 1.3E-16 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AMIS_77500 b9b90b9b6dd859a88928d54dff9e1f19 132 Gene3D G3DSA:2.30.110.10 6 131 2.2E-32 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AMIS_77500 b9b90b9b6dd859a88928d54dff9e1f19 132 TIGRFAM TIGR03618 Rv1155_F420: PPOX class probable F420-dependent enzyme 13 130 4.5E-33 T 14-10-2018 IPR019920 F420-binding domain, putative AMIS_66460 d7dba13d4ccd2b4fe7ad56dd4b92665b 317 Pfam PF00535 Glycosyl transferase family 2 65 186 2.1E-26 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AMIS_66460 d7dba13d4ccd2b4fe7ad56dd4b92665b 317 SUPERFAMILY SSF53448 55 292 6.93E-37 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_66460 d7dba13d4ccd2b4fe7ad56dd4b92665b 317 Gene3D G3DSA:3.90.550.10 37 307 1.1E-48 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_75810 546ec49cba069e8551b547451f343378 308 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 228 244 - T 14-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMIS_75810 546ec49cba069e8551b547451f343378 308 SUPERFAMILY SSF54782 217 305 5.75E-22 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMIS_75810 546ec49cba069e8551b547451f343378 308 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 4 209 6.1E-64 T 14-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMIS_75810 546ec49cba069e8551b547451f343378 308 Gene3D G3DSA:3.30.160.40 218 306 5.4E-24 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMIS_75810 546ec49cba069e8551b547451f343378 308 Gene3D G3DSA:3.40.190.10 95 196 1.0E-71 T 14-10-2018 AMIS_75810 546ec49cba069e8551b547451f343378 308 SUPERFAMILY SSF53850 3 215 1.95E-61 T 14-10-2018 AMIS_75810 546ec49cba069e8551b547451f343378 308 PRINTS PR00151 Porphobilinogen deaminase signature 227 244 1.4E-20 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMIS_75810 546ec49cba069e8551b547451f343378 308 PRINTS PR00151 Porphobilinogen deaminase signature 119 136 1.4E-20 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMIS_75810 546ec49cba069e8551b547451f343378 308 PRINTS PR00151 Porphobilinogen deaminase signature 138 155 1.4E-20 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMIS_75810 546ec49cba069e8551b547451f343378 308 PRINTS PR00151 Porphobilinogen deaminase signature 71 90 1.4E-20 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMIS_75810 546ec49cba069e8551b547451f343378 308 PIRSF PIRSF001438 1 308 8.5E-108 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMIS_75810 546ec49cba069e8551b547451f343378 308 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 3 298 33.608 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMIS_75810 546ec49cba069e8551b547451f343378 308 Gene3D G3DSA:3.40.190.10 4 210 1.0E-71 T 14-10-2018 AMIS_75810 546ec49cba069e8551b547451f343378 308 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 224 296 9.9E-20 T 14-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMIS_75810 546ec49cba069e8551b547451f343378 308 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 4 297 5.4E-87 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMIS_62710 b6d544e4464702439bc4793731db2879 443 Gene3D G3DSA:3.40.50.800 347 429 2.3E-11 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily AMIS_62710 b6d544e4464702439bc4793731db2879 443 Pfam PF13393 Histidyl-tRNA synthetase 11 331 3.6E-24 T 14-10-2018 AMIS_62710 b6d544e4464702439bc4793731db2879 443 Gene3D G3DSA:3.30.930.10 6 342 8.4E-85 T 14-10-2018 AMIS_62710 b6d544e4464702439bc4793731db2879 443 PIRSF PIRSF001549 6 440 3.6E-92 T 14-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 AMIS_62710 b6d544e4464702439bc4793731db2879 443 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 9 423 1.3E-100 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 AMIS_62710 b6d544e4464702439bc4793731db2879 443 SUPERFAMILY SSF52954 349 425 5.53E-11 T 14-10-2018 AMIS_62710 b6d544e4464702439bc4793731db2879 443 SUPERFAMILY SSF55681 9 339 3.19E-62 T 14-10-2018 AMIS_71220 2bf5010d9e8914882594271a37193135 609 Gene3D G3DSA:3.40.50.1220 218 386 1.2E-64 T 14-10-2018 AMIS_71220 2bf5010d9e8914882594271a37193135 609 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 223 358 6.7E-49 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AMIS_71220 2bf5010d9e8914882594271a37193135 609 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 420 572 2.8E-50 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AMIS_71220 2bf5010d9e8914882594271a37193135 609 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 457 476 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AMIS_71220 2bf5010d9e8914882594271a37193135 609 SUPERFAMILY SSF52467 216 388 4.24E-63 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AMIS_71220 2bf5010d9e8914882594271a37193135 609 SUPERFAMILY SSF52518 34 212 1.5E-61 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold AMIS_71220 2bf5010d9e8914882594271a37193135 609 SUPERFAMILY SSF52518 397 606 4.83E-69 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold AMIS_71220 2bf5010d9e8914882594271a37193135 609 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 35 595 2.0E-235 T 14-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AMIS_71220 2bf5010d9e8914882594271a37193135 609 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 35 200 3.8E-56 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AMIS_71220 2bf5010d9e8914882594271a37193135 609 Gene3D G3DSA:3.40.50.970 28 206 2.5E-69 T 14-10-2018 AMIS_71220 2bf5010d9e8914882594271a37193135 609 Gene3D G3DSA:3.40.50.970 391 604 3.9E-71 T 14-10-2018 AMIS_47120 bfb8b8720a12606023b488889dd13da0 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 268 8.3E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_47120 bfb8b8720a12606023b488889dd13da0 277 SUPERFAMILY SSF161098 7 277 1.03E-57 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_47120 bfb8b8720a12606023b488889dd13da0 277 Gene3D G3DSA:1.10.3720.10 3 264 1.5E-51 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_42720 03aae24fc27fc2ab0728ea8028238470 699 PRINTS PR00344 Bacterial sensor protein C-terminal signature 684 697 4.4E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_42720 03aae24fc27fc2ab0728ea8028238470 699 PRINTS PR00344 Bacterial sensor protein C-terminal signature 660 678 4.4E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_42720 03aae24fc27fc2ab0728ea8028238470 699 PRINTS PR00344 Bacterial sensor protein C-terminal signature 625 639 4.4E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_42720 03aae24fc27fc2ab0728ea8028238470 699 PRINTS PR00344 Bacterial sensor protein C-terminal signature 643 653 4.4E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_42720 03aae24fc27fc2ab0728ea8028238470 699 SUPERFAMILY SSF55781 286 462 8.83E-19 T 14-10-2018 AMIS_42720 03aae24fc27fc2ab0728ea8028238470 699 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 588 698 3.4E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_42720 03aae24fc27fc2ab0728ea8028238470 699 Gene3D G3DSA:1.10.287.130 467 546 8.5E-19 T 14-10-2018 AMIS_42720 03aae24fc27fc2ab0728ea8028238470 699 Gene3D G3DSA:3.30.450.40 32 162 1.4E-13 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_42720 03aae24fc27fc2ab0728ea8028238470 699 SUPERFAMILY SSF55874 536 698 5.76E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_42720 03aae24fc27fc2ab0728ea8028238470 699 Gene3D G3DSA:3.30.450.40 290 466 2.5E-21 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_42720 03aae24fc27fc2ab0728ea8028238470 699 SUPERFAMILY SSF55785 171 292 1.03E-8 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_42720 03aae24fc27fc2ab0728ea8028238470 699 SUPERFAMILY SSF55781 33 161 4.91E-15 T 14-10-2018 AMIS_42720 03aae24fc27fc2ab0728ea8028238470 699 SUPERFAMILY SSF47384 463 547 3.53E-16 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_42720 03aae24fc27fc2ab0728ea8028238470 699 Pfam PF01590 GAF domain 35 161 6.4E-6 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_42720 03aae24fc27fc2ab0728ea8028238470 699 SMART SM00387 588 699 2.4E-35 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_42720 03aae24fc27fc2ab0728ea8028238470 699 Pfam PF13185 GAF domain 315 463 3.7E-14 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_42720 03aae24fc27fc2ab0728ea8028238470 699 SMART SM00388 479 546 1.5E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_42720 03aae24fc27fc2ab0728ea8028238470 699 SMART SM00065 27 179 0.0019 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_42720 03aae24fc27fc2ab0728ea8028238470 699 SMART SM00065 316 474 4.3E-11 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_42720 03aae24fc27fc2ab0728ea8028238470 699 Gene3D G3DSA:3.30.450.20 170 289 7.1E-10 T 14-10-2018 AMIS_42720 03aae24fc27fc2ab0728ea8028238470 699 Gene3D G3DSA:3.30.565.10 547 699 4.6E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_42720 03aae24fc27fc2ab0728ea8028238470 699 Pfam PF00512 His Kinase A (phospho-acceptor) domain 480 546 5.3E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_74080 f0c2a37ce80034a42fa8deb733694de2 193 SUPERFAMILY SSF52980 18 166 4.45E-19 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AMIS_74080 f0c2a37ce80034a42fa8deb733694de2 193 Pfam PF05685 Putative restriction endonuclease 20 185 1.8E-26 T 14-10-2018 IPR008538 Domain of unknown function DUF820 AMIS_74080 f0c2a37ce80034a42fa8deb733694de2 193 Gene3D G3DSA:3.90.1570.10 13 180 2.1E-17 T 14-10-2018 AMIS_72280 aa6f722aaa89574602a0533dc5fc6d07 720 Gene3D G3DSA:3.90.550.10 352 567 1.0E-48 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_72280 aa6f722aaa89574602a0533dc5fc6d07 720 Pfam PF01522 Polysaccharide deacetylase 84 204 5.5E-28 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMIS_72280 aa6f722aaa89574602a0533dc5fc6d07 720 SUPERFAMILY SSF88713 77 282 7.41E-52 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AMIS_72280 aa6f722aaa89574602a0533dc5fc6d07 720 SUPERFAMILY SSF53448 354 606 5.63E-61 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_72280 aa6f722aaa89574602a0533dc5fc6d07 720 Pfam PF13641 Glycosyltransferase like family 2 357 575 8.7E-42 T 14-10-2018 AMIS_72280 aa6f722aaa89574602a0533dc5fc6d07 720 Gene3D G3DSA:3.20.20.370 72 289 3.0E-60 T 14-10-2018 AMIS_3510 51ba76bc86a2c36768b4a57ba32dd464 296 SMART SM00530 17 72 2.0E-5 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMIS_3510 51ba76bc86a2c36768b4a57ba32dd464 296 Pfam PF13560 Helix-turn-helix domain 18 74 1.6E-9 T 14-10-2018 AMIS_3510 51ba76bc86a2c36768b4a57ba32dd464 296 SUPERFAMILY SSF47413 12 67 3.94E-9 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_3510 51ba76bc86a2c36768b4a57ba32dd464 296 Gene3D G3DSA:1.10.260.40 2 72 9.5E-9 T 14-10-2018 AMIS_13890 f319db490a9646bb0c900a9e3ba2c198 463 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 9 322 1.1E-66 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMIS_13890 f319db490a9646bb0c900a9e3ba2c198 463 SUPERFAMILY SSF55424 342 460 6.87E-29 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AMIS_13890 f319db490a9646bb0c900a9e3ba2c198 463 Gene3D G3DSA:3.50.50.60 9 327 1.2E-105 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_13890 f319db490a9646bb0c900a9e3ba2c198 463 SUPERFAMILY SSF51905 8 365 7.69E-58 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_13890 f319db490a9646bb0c900a9e3ba2c198 463 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 9 460 9.6E-140 T 14-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 AMIS_13890 f319db490a9646bb0c900a9e3ba2c198 463 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 260 274 4.2E-66 T 14-10-2018 AMIS_13890 f319db490a9646bb0c900a9e3ba2c198 463 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 302 309 4.2E-66 T 14-10-2018 AMIS_13890 f319db490a9646bb0c900a9e3ba2c198 463 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 403 418 4.2E-66 T 14-10-2018 AMIS_13890 f319db490a9646bb0c900a9e3ba2c198 463 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 338 359 4.2E-66 T 14-10-2018 AMIS_13890 f319db490a9646bb0c900a9e3ba2c198 463 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 4.2E-66 T 14-10-2018 AMIS_13890 f319db490a9646bb0c900a9e3ba2c198 463 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 42 57 4.2E-66 T 14-10-2018 AMIS_13890 f319db490a9646bb0c900a9e3ba2c198 463 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 425 445 4.2E-66 T 14-10-2018 AMIS_13890 f319db490a9646bb0c900a9e3ba2c198 463 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 139 148 4.2E-66 T 14-10-2018 AMIS_13890 f319db490a9646bb0c900a9e3ba2c198 463 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 175 200 4.2E-66 T 14-10-2018 AMIS_13890 f319db490a9646bb0c900a9e3ba2c198 463 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 175 193 5.2E-37 T 14-10-2018 AMIS_13890 f319db490a9646bb0c900a9e3ba2c198 463 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 5.2E-37 T 14-10-2018 AMIS_13890 f319db490a9646bb0c900a9e3ba2c198 463 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 136 154 5.2E-37 T 14-10-2018 AMIS_13890 f319db490a9646bb0c900a9e3ba2c198 463 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 275 5.2E-37 T 14-10-2018 AMIS_13890 f319db490a9646bb0c900a9e3ba2c198 463 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 287 309 5.2E-37 T 14-10-2018 AMIS_13890 f319db490a9646bb0c900a9e3ba2c198 463 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 43 53 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AMIS_13890 f319db490a9646bb0c900a9e3ba2c198 463 PIRSF PIRSF000350 1 447 5.2E-76 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 AMIS_13890 f319db490a9646bb0c900a9e3ba2c198 463 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 342 450 1.2E-24 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AMIS_13890 f319db490a9646bb0c900a9e3ba2c198 463 Gene3D G3DSA:3.30.390.30 341 461 1.4E-31 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AMIS_13890 f319db490a9646bb0c900a9e3ba2c198 463 Gene3D G3DSA:3.50.50.60 148 266 1.2E-105 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_12000 a04211e02971083e64f347f340a71589 170 SUPERFAMILY SSF103473 27 148 1.83E-5 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_68850 70fd27e30ad2e0af4bd3506fb0e95d59 229 SUPERFAMILY SSF50037 130 227 1.01E-21 T 14-10-2018 IPR008988 Transcriptional repressor, C-terminal AMIS_68850 70fd27e30ad2e0af4bd3506fb0e95d59 229 Pfam PF04023 FeoA domain 163 227 8.7E-9 T 14-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 AMIS_68850 70fd27e30ad2e0af4bd3506fb0e95d59 229 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 65 133 3.4E-26 T 14-10-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 AMIS_68850 70fd27e30ad2e0af4bd3506fb0e95d59 229 Gene3D G3DSA:1.10.10.10 1 72 4.0E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_68850 70fd27e30ad2e0af4bd3506fb0e95d59 229 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 3 62 1.8E-19 T 14-10-2018 IPR022687 DTXR-type HTH domain GO:0003677 AMIS_68850 70fd27e30ad2e0af4bd3506fb0e95d59 229 SMART SM00529 26 125 3.2E-42 T 14-10-2018 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 AMIS_68850 70fd27e30ad2e0af4bd3506fb0e95d59 229 SMART SM00899 155 228 7.8E-8 T 14-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 AMIS_68850 70fd27e30ad2e0af4bd3506fb0e95d59 229 SUPERFAMILY SSF46785 2 63 2.9E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_68850 70fd27e30ad2e0af4bd3506fb0e95d59 229 Gene3D G3DSA:1.10.60.10 74 140 5.2E-27 T 14-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 AMIS_68850 70fd27e30ad2e0af4bd3506fb0e95d59 229 Gene3D G3DSA:2.30.30.90 160 228 2.6E-10 T 14-10-2018 IPR038157 Ferrous iron transporter, core domain AMIS_68850 70fd27e30ad2e0af4bd3506fb0e95d59 229 SUPERFAMILY SSF47979 65 137 3.14E-24 T 14-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 AMIS_39690 7872e739a1e8a6c3780652d8a0156053 214 Pfam PF01323 DSBA-like thioredoxin domain 6 205 1.5E-41 T 14-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 AMIS_39690 7872e739a1e8a6c3780652d8a0156053 214 SUPERFAMILY SSF52833 2 210 3.24E-42 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMIS_39690 7872e739a1e8a6c3780652d8a0156053 214 Gene3D G3DSA:3.40.30.10 1 210 4.7E-70 T 14-10-2018 AMIS_72760 b16dcf301108bea43aab493877a1dfc2 252 SUPERFAMILY SSF55729 16 223 6.51E-41 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_72760 b16dcf301108bea43aab493877a1dfc2 252 Gene3D G3DSA:3.40.630.30 20 168 3.3E-29 T 14-10-2018 AMIS_72760 b16dcf301108bea43aab493877a1dfc2 252 Pfam PF13444 Acetyltransferase (GNAT) domain 33 133 2.7E-32 T 14-10-2018 AMIS_77910 c059624a1fc33db39fd92105dfd3605e 1172 Pfam PF12846 AAA-like domain 882 1144 1.3E-23 T 14-10-2018 AMIS_77910 c059624a1fc33db39fd92105dfd3605e 1172 Gene3D G3DSA:3.40.50.300 782 1077 1.1E-10 T 14-10-2018 AMIS_77910 c059624a1fc33db39fd92105dfd3605e 1172 SUPERFAMILY SSF52540 726 1099 7.59E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_77910 c059624a1fc33db39fd92105dfd3605e 1172 Gene3D G3DSA:1.10.8.730 845 971 1.1E-10 T 14-10-2018 AMIS_65530 2e3b625eb87d5bf12809c759d2db256e 544 Pfam PF00082 Subtilase family 128 350 3.7E-40 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AMIS_65530 2e3b625eb87d5bf12809c759d2db256e 544 Gene3D G3DSA:3.30.70.80 22 89 9.3E-11 T 14-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 AMIS_65530 2e3b625eb87d5bf12809c759d2db256e 544 Gene3D G3DSA:2.60.40.10 456 544 5.0E-10 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_65530 2e3b625eb87d5bf12809c759d2db256e 544 Gene3D G3DSA:3.40.50.200 92 366 4.6E-94 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AMIS_65530 2e3b625eb87d5bf12809c759d2db256e 544 SUPERFAMILY SSF54897 29 89 3.66E-7 T 14-10-2018 AMIS_65530 2e3b625eb87d5bf12809c759d2db256e 544 Pfam PF05345 Putative Ig domain 492 531 1.4E-5 T 14-10-2018 IPR008009 Putative Ig AMIS_65530 2e3b625eb87d5bf12809c759d2db256e 544 SUPERFAMILY SSF49313 467 543 1.73E-6 T 14-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 AMIS_65530 2e3b625eb87d5bf12809c759d2db256e 544 PRINTS PR00723 Subtilisin serine protease family (S8) signature 159 172 3.0E-18 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMIS_65530 2e3b625eb87d5bf12809c759d2db256e 544 PRINTS PR00723 Subtilisin serine protease family (S8) signature 312 328 3.0E-18 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMIS_65530 2e3b625eb87d5bf12809c759d2db256e 544 PRINTS PR00723 Subtilisin serine protease family (S8) signature 121 140 3.0E-18 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMIS_65530 2e3b625eb87d5bf12809c759d2db256e 544 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 313 323 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site AMIS_65530 2e3b625eb87d5bf12809c759d2db256e 544 Pfam PF05922 Peptidase inhibitor I9 28 90 5.1E-5 T 14-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 AMIS_65530 2e3b625eb87d5bf12809c759d2db256e 544 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 126 137 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site AMIS_65530 2e3b625eb87d5bf12809c759d2db256e 544 Gene3D G3DSA:2.60.40.10 367 454 8.0E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_65530 2e3b625eb87d5bf12809c759d2db256e 544 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 163 173 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site AMIS_65530 2e3b625eb87d5bf12809c759d2db256e 544 SUPERFAMILY SSF49313 372 455 8.16E-6 T 14-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 AMIS_65530 2e3b625eb87d5bf12809c759d2db256e 544 SUPERFAMILY SSF52743 95 361 6.94E-81 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AMIS_45860 56b9f555c46910902b074e9d176834dd 106 SUPERFAMILY SSF52091 16 93 1.47E-17 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_45860 56b9f555c46910902b074e9d176834dd 106 Pfam PF13466 STAS domain 16 93 1.2E-17 T 14-10-2018 IPR002645 STAS domain AMIS_45860 56b9f555c46910902b074e9d176834dd 106 Gene3D G3DSA:3.30.750.24 8 95 1.5E-20 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_58190 51a35641338a5012b7066e442a80d649 442 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 106 120 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AMIS_58190 51a35641338a5012b7066e442a80d649 442 TIGRFAM TIGR02819 fdhA_non_GSH: formaldehyde dehydrogenase, glutathione-independent 32 440 3.5E-219 T 14-10-2018 IPR014184 Formaldehyde dehydrogenase, glutathione-independent GO:0016491|GO:0055114 AMIS_58190 51a35641338a5012b7066e442a80d649 442 SUPERFAMILY SSF51735 203 400 9.98E-58 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_58190 51a35641338a5012b7066e442a80d649 442 Gene3D G3DSA:3.90.180.10 72 425 5.7E-128 T 14-10-2018 AMIS_58190 51a35641338a5012b7066e442a80d649 442 SUPERFAMILY SSF50129 34 225 1.16E-55 T 14-10-2018 IPR011032 GroES-like superfamily AMIS_58190 51a35641338a5012b7066e442a80d649 442 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 74 183 1.9E-24 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMIS_58190 51a35641338a5012b7066e442a80d649 442 Gene3D G3DSA:3.40.50.720 217 388 5.7E-128 T 14-10-2018 AMIS_58190 51a35641338a5012b7066e442a80d649 442 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 220 286 1.0E-6 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AMIS_75340 49e2f29b8c5f0be9c384affcc4a7ecfd 109 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 2 51 4.4E-19 T 14-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain AMIS_75340 49e2f29b8c5f0be9c384affcc4a7ecfd 109 SMART SM00834 2 41 2.6E-13 T 14-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain AMIS_75340 49e2f29b8c5f0be9c384affcc4a7ecfd 109 Pfam PF09723 Zinc ribbon domain 2 40 4.1E-14 T 14-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain AMIS_66910 cfb23370cf2401ccd3b39beefb30f3b3 562 Pfam PF13538 UvrD-like helicase C-terminal domain 426 468 1.7E-8 T 14-10-2018 IPR027785 UvrD-like helicase C-terminal domain AMIS_66910 cfb23370cf2401ccd3b39beefb30f3b3 562 SUPERFAMILY SSF52540 2 475 1.16E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_66910 cfb23370cf2401ccd3b39beefb30f3b3 562 Pfam PF13245 AAA domain 7 292 3.5E-11 T 14-10-2018 AMIS_66910 cfb23370cf2401ccd3b39beefb30f3b3 562 Gene3D G3DSA:3.40.50.300 321 481 3.4E-15 T 14-10-2018 AMIS_66910 cfb23370cf2401ccd3b39beefb30f3b3 562 Gene3D G3DSA:3.40.50.300 180 306 9.0E-9 T 14-10-2018 AMIS_66910 cfb23370cf2401ccd3b39beefb30f3b3 562 Gene3D G3DSA:3.40.50.300 1 90 4.7E-8 T 14-10-2018 AMIS_6960 9847f0e171f0280394855eb4ff69c201 515 Pfam PF00117 Glutamine amidotransferase class-I 9 188 5.6E-37 T 14-10-2018 IPR017926 Glutamine amidotransferase AMIS_6960 9847f0e171f0280394855eb4ff69c201 515 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 4 515 53.124 T 14-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 AMIS_6960 9847f0e171f0280394855eb4ff69c201 515 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 200 515 1.7E-145 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AMIS_6960 9847f0e171f0280394855eb4ff69c201 515 PRINTS PR00097 Anthranilate synthase component II signature 165 178 2.6E-7 T 14-10-2018 AMIS_6960 9847f0e171f0280394855eb4ff69c201 515 PRINTS PR00097 Anthranilate synthase component II signature 51 60 2.6E-7 T 14-10-2018 AMIS_6960 9847f0e171f0280394855eb4ff69c201 515 PRINTS PR00097 Anthranilate synthase component II signature 78 89 2.6E-7 T 14-10-2018 AMIS_6960 9847f0e171f0280394855eb4ff69c201 515 Gene3D G3DSA:3.40.50.880 5 197 3.8E-48 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_6960 9847f0e171f0280394855eb4ff69c201 515 Pfam PF02540 NAD synthase 212 242 2.4E-6 T 14-10-2018 IPR022310 NAD/GMP synthase AMIS_6960 9847f0e171f0280394855eb4ff69c201 515 Gene3D G3DSA:3.30.300.10 395 515 3.3E-50 T 14-10-2018 AMIS_6960 9847f0e171f0280394855eb4ff69c201 515 SUPERFAMILY SSF54810 394 515 4.05E-46 T 14-10-2018 AMIS_6960 9847f0e171f0280394855eb4ff69c201 515 SUPERFAMILY SSF52402 181 435 2.01E-58 T 14-10-2018 AMIS_6960 9847f0e171f0280394855eb4ff69c201 515 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 7 192 5.9E-68 T 14-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AMIS_6960 9847f0e171f0280394855eb4ff69c201 515 SUPERFAMILY SSF52317 6 225 1.07E-51 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_6960 9847f0e171f0280394855eb4ff69c201 515 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 48 62 4.0E-6 T 14-10-2018 AMIS_6960 9847f0e171f0280394855eb4ff69c201 515 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 7 21 4.0E-6 T 14-10-2018 AMIS_6960 9847f0e171f0280394855eb4ff69c201 515 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 78 94 4.0E-6 T 14-10-2018 AMIS_6960 9847f0e171f0280394855eb4ff69c201 515 PRINTS PR00096 Glutamine amidotransferase superfamily signature 78 89 1.6E-8 T 14-10-2018 AMIS_6960 9847f0e171f0280394855eb4ff69c201 515 PRINTS PR00096 Glutamine amidotransferase superfamily signature 165 178 1.6E-8 T 14-10-2018 AMIS_6960 9847f0e171f0280394855eb4ff69c201 515 PRINTS PR00096 Glutamine amidotransferase superfamily signature 51 60 1.6E-8 T 14-10-2018 AMIS_6960 9847f0e171f0280394855eb4ff69c201 515 Gene3D G3DSA:3.40.50.620 198 394 5.6E-76 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMIS_6960 9847f0e171f0280394855eb4ff69c201 515 Pfam PF00958 GMP synthase C terminal domain 422 514 8.4E-38 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AMIS_43280 3a559248b823ea78d2404c147111be1d 257 Gene3D G3DSA:3.40.50.300 4 256 1.0E-65 T 14-10-2018 AMIS_43280 3a559248b823ea78d2404c147111be1d 257 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_43280 3a559248b823ea78d2404c147111be1d 257 SMART SM00382 28 216 4.8E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_43280 3a559248b823ea78d2404c147111be1d 257 SUPERFAMILY SSF52540 4 229 1.36E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_43280 3a559248b823ea78d2404c147111be1d 257 Pfam PF00005 ABC transporter 21 167 3.2E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_29550 044a553b30b2443582ed35bd0c270526 415 SUPERFAMILY SSF53098 34 411 4.7E-30 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily AMIS_29550 044a553b30b2443582ed35bd0c270526 415 Pfam PF13546 DDE superfamily endonuclease 20 288 2.8E-79 T 14-10-2018 IPR038721 Transposase IS701-like, DDE domain AMIS_45880 044a553b30b2443582ed35bd0c270526 415 SUPERFAMILY SSF53098 34 411 4.7E-30 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily AMIS_45880 044a553b30b2443582ed35bd0c270526 415 Pfam PF13546 DDE superfamily endonuclease 20 288 2.8E-79 T 14-10-2018 IPR038721 Transposase IS701-like, DDE domain AMIS_64490 044a553b30b2443582ed35bd0c270526 415 SUPERFAMILY SSF53098 34 411 4.7E-30 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily AMIS_64490 044a553b30b2443582ed35bd0c270526 415 Pfam PF13546 DDE superfamily endonuclease 20 288 2.8E-79 T 14-10-2018 IPR038721 Transposase IS701-like, DDE domain AMIS_78960 044a553b30b2443582ed35bd0c270526 415 SUPERFAMILY SSF53098 34 411 4.7E-30 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily AMIS_78960 044a553b30b2443582ed35bd0c270526 415 Pfam PF13546 DDE superfamily endonuclease 20 288 2.8E-79 T 14-10-2018 IPR038721 Transposase IS701-like, DDE domain AMIS_41730 03acf53b0c70107259d4b6f5a5c93fd4 154 Pfam PF03928 Haem-degrading 22 149 2.3E-32 T 14-10-2018 IPR005624 Haem-degrading AMIS_41730 03acf53b0c70107259d4b6f5a5c93fd4 154 Gene3D G3DSA:3.30.450.150 1 154 2.6E-52 T 14-10-2018 IPR038084 GlcG-like domain superfamily AMIS_41730 03acf53b0c70107259d4b6f5a5c93fd4 154 SUPERFAMILY SSF143744 14 152 1.44E-24 T 14-10-2018 IPR038084 GlcG-like domain superfamily AMIS_41730 03acf53b0c70107259d4b6f5a5c93fd4 154 PIRSF PIRSF008757 1 154 1.2E-59 T 14-10-2018 IPR010371 Uncharacterised protein family UPF0303 AMIS_41730 03acf53b0c70107259d4b6f5a5c93fd4 154 Hamap MF_00761 UPF0303 protein . 3 154 31.889 T 14-10-2018 IPR010371 Uncharacterised protein family UPF0303 AMIS_57750 ca8c635e4b375a401c30f8f6898f7a7e 318 Gene3D G3DSA:3.40.190.10 92 163 8.4E-19 T 14-10-2018 AMIS_57750 ca8c635e4b375a401c30f8f6898f7a7e 318 Gene3D G3DSA:1.10.10.10 1 91 6.1E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_57750 ca8c635e4b375a401c30f8f6898f7a7e 318 Pfam PF03466 LysR substrate binding domain 86 288 1.2E-27 T 14-10-2018 IPR005119 LysR, substrate-binding AMIS_57750 ca8c635e4b375a401c30f8f6898f7a7e 318 SUPERFAMILY SSF46785 4 75 6.33E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_57750 ca8c635e4b375a401c30f8f6898f7a7e 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.7E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_57750 ca8c635e4b375a401c30f8f6898f7a7e 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.7E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_57750 ca8c635e4b375a401c30f8f6898f7a7e 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.7E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_57750 ca8c635e4b375a401c30f8f6898f7a7e 318 Gene3D G3DSA:3.40.190.10 164 256 8.4E-19 T 14-10-2018 AMIS_57750 ca8c635e4b375a401c30f8f6898f7a7e 318 SUPERFAMILY SSF53850 89 287 1.99E-27 T 14-10-2018 AMIS_57750 ca8c635e4b375a401c30f8f6898f7a7e 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 61 7.0E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_47360 160338d5262bb38914415d3bc8b10059 203 SUPERFAMILY SSF55874 88 201 2.88E-16 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_47360 160338d5262bb38914415d3bc8b10059 203 Gene3D G3DSA:3.30.565.10 62 199 8.7E-17 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_47360 160338d5262bb38914415d3bc8b10059 203 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 105 185 1.0E-5 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_47360 160338d5262bb38914415d3bc8b10059 203 SMART SM00387 101 202 2.8E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_47360 160338d5262bb38914415d3bc8b10059 203 Gene3D G3DSA:1.10.287.130 4 61 8.7E-17 T 14-10-2018 AMIS_23900 d06191563c402036bf66c81a6bdfa9bd 449 Pfam PF00571 CBS domain 282 336 1.1E-6 T 14-10-2018 IPR000644 CBS domain AMIS_23900 d06191563c402036bf66c81a6bdfa9bd 449 Pfam PF00571 CBS domain 221 270 5.9E-6 T 14-10-2018 IPR000644 CBS domain AMIS_23900 d06191563c402036bf66c81a6bdfa9bd 449 Gene3D G3DSA:3.10.580.10 200 350 8.6E-41 T 14-10-2018 AMIS_23900 d06191563c402036bf66c81a6bdfa9bd 449 Pfam PF03471 Transporter associated domain 352 444 1.2E-16 T 14-10-2018 IPR005170 Transporter-associated domain AMIS_23900 d06191563c402036bf66c81a6bdfa9bd 449 Pfam PF01595 Domain of unknown function DUF21 9 200 1.5E-35 T 14-10-2018 IPR002550 CNNM, transmembrane domain AMIS_23900 d06191563c402036bf66c81a6bdfa9bd 449 SMART SM00116 288 336 3.1 T 14-10-2018 IPR000644 CBS domain AMIS_23900 d06191563c402036bf66c81a6bdfa9bd 449 SMART SM00116 226 274 0.0015 T 14-10-2018 IPR000644 CBS domain AMIS_23900 d06191563c402036bf66c81a6bdfa9bd 449 SUPERFAMILY SSF54631 206 339 2.27E-25 T 14-10-2018 AMIS_23900 d06191563c402036bf66c81a6bdfa9bd 449 SMART SM01091 351 445 2.2E-18 T 14-10-2018 IPR005170 Transporter-associated domain AMIS_23900 d06191563c402036bf66c81a6bdfa9bd 449 Gene3D G3DSA:3.30.465.10 351 444 5.8E-20 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AMIS_23900 d06191563c402036bf66c81a6bdfa9bd 449 SUPERFAMILY SSF56176 349 445 9.54E-14 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AMIS_30380 81ce67aa22db6d08a7257c34c19ec9f7 405 Gene3D G3DSA:3.50.50.60 113 254 3.4E-94 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_30380 81ce67aa22db6d08a7257c34c19ec9f7 405 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 101 109 9.3E-9 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMIS_30380 81ce67aa22db6d08a7257c34c19ec9f7 405 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 281 299 9.3E-9 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMIS_30380 81ce67aa22db6d08a7257c34c19ec9f7 405 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 3 25 9.3E-9 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMIS_30380 81ce67aa22db6d08a7257c34c19ec9f7 405 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 249 270 9.3E-9 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMIS_30380 81ce67aa22db6d08a7257c34c19ec9f7 405 Pfam PF14759 Reductase C-terminal 335 403 6.5E-13 T 14-10-2018 IPR028202 Reductase, C-terminal AMIS_30380 81ce67aa22db6d08a7257c34c19ec9f7 405 Gene3D G3DSA:3.50.50.60 4 316 3.4E-94 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_30380 81ce67aa22db6d08a7257c34c19ec9f7 405 SUPERFAMILY SSF51905 3 184 6.38E-36 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_30380 81ce67aa22db6d08a7257c34c19ec9f7 405 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 271 293 6.9E-22 T 14-10-2018 AMIS_30380 81ce67aa22db6d08a7257c34c19ec9f7 405 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 6.9E-22 T 14-10-2018 AMIS_30380 81ce67aa22db6d08a7257c34c19ec9f7 405 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 140 158 6.9E-22 T 14-10-2018 AMIS_30380 81ce67aa22db6d08a7257c34c19ec9f7 405 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 6.9E-22 T 14-10-2018 AMIS_30380 81ce67aa22db6d08a7257c34c19ec9f7 405 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 247 263 6.9E-22 T 14-10-2018 AMIS_30380 81ce67aa22db6d08a7257c34c19ec9f7 405 SUPERFAMILY SSF55424 328 403 1.17E-20 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AMIS_30380 81ce67aa22db6d08a7257c34c19ec9f7 405 SUPERFAMILY SSF51905 139 325 3.31E-25 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_30380 81ce67aa22db6d08a7257c34c19ec9f7 405 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 316 7.2E-51 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMIS_30380 81ce67aa22db6d08a7257c34c19ec9f7 405 Gene3D G3DSA:3.30.390.30 335 405 1.4E-14 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AMIS_37630 f0231f60205aab76ebe3b65707c58262 287 SUPERFAMILY SSF161098 6 276 2.9E-47 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_37630 f0231f60205aab76ebe3b65707c58262 287 Gene3D G3DSA:1.10.3720.10 13 280 8.5E-45 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_37630 f0231f60205aab76ebe3b65707c58262 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 70 269 9.2E-11 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_51350 4f61e1a209852a9b507a2bf93476d58b 370 Pfam PF00672 HAMP domain 85 133 3.4E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_51350 4f61e1a209852a9b507a2bf93476d58b 370 SUPERFAMILY SSF47384 121 204 6.08E-15 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_51350 4f61e1a209852a9b507a2bf93476d58b 370 Gene3D G3DSA:3.30.565.10 208 368 2.2E-24 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_51350 4f61e1a209852a9b507a2bf93476d58b 370 SMART SM00304 84 137 4.3E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_51350 4f61e1a209852a9b507a2bf93476d58b 370 SUPERFAMILY SSF55874 196 366 6.29E-24 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_51350 4f61e1a209852a9b507a2bf93476d58b 370 SMART SM00388 138 204 2.7E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_51350 4f61e1a209852a9b507a2bf93476d58b 370 SUPERFAMILY SSF158472 85 134 1.96E-6 T 14-10-2018 AMIS_51350 4f61e1a209852a9b507a2bf93476d58b 370 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 254 366 2.9E-12 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_51350 4f61e1a209852a9b507a2bf93476d58b 370 Pfam PF00512 His Kinase A (phospho-acceptor) domain 138 204 2.6E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_51350 4f61e1a209852a9b507a2bf93476d58b 370 SMART SM00387 250 370 4.6E-13 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_51350 4f61e1a209852a9b507a2bf93476d58b 370 Gene3D G3DSA:1.10.287.130 88 204 1.4E-27 T 14-10-2018 AMIS_37440 2aca488f1d38cef8be4a7c4e34531af4 394 SMART SM00388 176 241 1.2E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_37440 2aca488f1d38cef8be4a7c4e34531af4 394 Gene3D G3DSA:3.30.450.40 21 166 1.5E-21 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_37440 2aca488f1d38cef8be4a7c4e34531af4 394 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 287 393 2.5E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_37440 2aca488f1d38cef8be4a7c4e34531af4 394 PRINTS PR00344 Bacterial sensor protein C-terminal signature 355 373 5.1E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_37440 2aca488f1d38cef8be4a7c4e34531af4 394 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 393 5.1E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_37440 2aca488f1d38cef8be4a7c4e34531af4 394 PRINTS PR00344 Bacterial sensor protein C-terminal signature 320 334 5.1E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_37440 2aca488f1d38cef8be4a7c4e34531af4 394 SMART SM00387 287 394 1.6E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_37440 2aca488f1d38cef8be4a7c4e34531af4 394 SUPERFAMILY SSF47384 164 240 6.47E-17 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_37440 2aca488f1d38cef8be4a7c4e34531af4 394 Gene3D G3DSA:3.30.565.10 249 394 1.9E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_37440 2aca488f1d38cef8be4a7c4e34531af4 394 Pfam PF01590 GAF domain 26 152 1.3E-14 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_37440 2aca488f1d38cef8be4a7c4e34531af4 394 SMART SM00065 22 164 8.7E-14 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_37440 2aca488f1d38cef8be4a7c4e34531af4 394 SUPERFAMILY SSF55874 231 393 3.67E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_37440 2aca488f1d38cef8be4a7c4e34531af4 394 SUPERFAMILY SSF55781 26 158 5.23E-27 T 14-10-2018 AMIS_37440 2aca488f1d38cef8be4a7c4e34531af4 394 Pfam PF00512 His Kinase A (phospho-acceptor) domain 178 237 2.3E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_37440 2aca488f1d38cef8be4a7c4e34531af4 394 Gene3D G3DSA:1.10.287.130 171 240 1.3E-16 T 14-10-2018 AMIS_330 29ce7f5013a53f730b22679787069030 489 SUPERFAMILY SSF55931 38 468 7.36E-46 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AMIS_330 29ce7f5013a53f730b22679787069030 489 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 188 250 1.6E-5 T 14-10-2018 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AMIS_330 29ce7f5013a53f730b22679787069030 489 PIRSF PIRSF012666 1 489 2.2E-202 T 14-10-2018 IPR016602 Uncharacterised conserved protein UCP012666 AMIS_50190 78d095c3dfdef195706a437f79a87fea 468 Gene3D G3DSA:3.40.309.10 248 429 4.7E-124 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AMIS_50190 78d095c3dfdef195706a437f79a87fea 468 SUPERFAMILY SSF53720 3 463 1.7E-123 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMIS_50190 78d095c3dfdef195706a437f79a87fea 468 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 271 282 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AMIS_50190 78d095c3dfdef195706a437f79a87fea 468 Gene3D G3DSA:3.40.605.10 8 457 4.7E-124 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AMIS_50190 78d095c3dfdef195706a437f79a87fea 468 Pfam PF00171 Aldehyde dehydrogenase family 12 459 1.7E-115 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AMIS_63880 edc2b0dea0ab8e359d36237b64a709c9 576 TIGRFAM TIGR02402 trehalose_TreZ: malto-oligosyltrehalose trehalohydrolase 3 533 1.1E-227 T 14-10-2018 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00500+3.2.1.141|MetaCyc: PWY-2661 AMIS_63880 edc2b0dea0ab8e359d36237b64a709c9 576 Gene3D G3DSA:2.60.40.10 1 83 2.5E-21 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_63880 edc2b0dea0ab8e359d36237b64a709c9 576 SMART SM00642 79 444 1.4E-8 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMIS_63880 edc2b0dea0ab8e359d36237b64a709c9 576 Pfam PF11941 Domain of unknown function (DUF3459) 488 572 1.5E-10 T 14-10-2018 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) AMIS_63880 edc2b0dea0ab8e359d36237b64a709c9 576 Pfam PF00128 Alpha amylase, catalytic domain 110 200 4.4E-12 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMIS_63880 edc2b0dea0ab8e359d36237b64a709c9 576 Gene3D G3DSA:3.20.20.80 87 497 1.9E-170 T 14-10-2018 AMIS_63880 edc2b0dea0ab8e359d36237b64a709c9 576 SUPERFAMILY SSF81296 2 77 9.8E-14 T 14-10-2018 IPR014756 Immunoglobulin E-set AMIS_63880 edc2b0dea0ab8e359d36237b64a709c9 576 SUPERFAMILY SSF51445 74 503 7.16E-111 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_63880 edc2b0dea0ab8e359d36237b64a709c9 576 Gene3D G3DSA:1.10.10.760 429 469 1.9E-170 T 14-10-2018 AMIS_63880 edc2b0dea0ab8e359d36237b64a709c9 576 PIRSF PIRSF006337 1 575 8.7E-230 T 14-10-2018 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00500+3.2.1.141|MetaCyc: PWY-2661 AMIS_78150 8d94f7d5cd67fd1dd15cb0039d83949f 191 SUPERFAMILY SSF52833 54 184 9.28E-25 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMIS_78150 8d94f7d5cd67fd1dd15cb0039d83949f 191 ProSitePatterns PS00194 Thioredoxin family active site. 80 98 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AMIS_78150 8d94f7d5cd67fd1dd15cb0039d83949f 191 Pfam PF00578 AhpC/TSA family 56 166 1.0E-15 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AMIS_78150 8d94f7d5cd67fd1dd15cb0039d83949f 191 Gene3D G3DSA:3.40.30.10 41 190 1.9E-25 T 14-10-2018 AMIS_49810 362bbde592e5c6362c08b80d3de98a22 220 SMART SM00448 8 121 1.5E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_49810 362bbde592e5c6362c08b80d3de98a22 220 Pfam PF00196 Bacterial regulatory proteins, luxR family 156 211 3.1E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_49810 362bbde592e5c6362c08b80d3de98a22 220 Pfam PF00072 Response regulator receiver domain 10 121 1.1E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_49810 362bbde592e5c6362c08b80d3de98a22 220 SUPERFAMILY SSF52172 8 133 3.98E-31 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_49810 362bbde592e5c6362c08b80d3de98a22 220 Gene3D G3DSA:3.40.50.12740 9 216 8.6E-55 T 14-10-2018 AMIS_49810 362bbde592e5c6362c08b80d3de98a22 220 SMART SM00421 154 211 2.8E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_49810 362bbde592e5c6362c08b80d3de98a22 220 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 187 4.3E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_49810 362bbde592e5c6362c08b80d3de98a22 220 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 171 4.3E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_49810 362bbde592e5c6362c08b80d3de98a22 220 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 187 199 4.3E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_49810 362bbde592e5c6362c08b80d3de98a22 220 SUPERFAMILY SSF46894 146 216 6.8E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_55680 a50eea9c38cda3fe9b1ee07cb53b24d4 508 Gene3D G3DSA:3.40.50.300 1 257 7.3E-56 T 14-10-2018 AMIS_55680 a50eea9c38cda3fe9b1ee07cb53b24d4 508 Gene3D G3DSA:3.40.50.300 267 503 1.2E-44 T 14-10-2018 AMIS_55680 a50eea9c38cda3fe9b1ee07cb53b24d4 508 Pfam PF00005 ABC transporter 282 433 9.3E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_55680 a50eea9c38cda3fe9b1ee07cb53b24d4 508 Pfam PF00005 ABC transporter 23 172 1.1E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_55680 a50eea9c38cda3fe9b1ee07cb53b24d4 508 SUPERFAMILY SSF52540 276 487 8.1E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_55680 a50eea9c38cda3fe9b1ee07cb53b24d4 508 SMART SM00382 32 220 2.9E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_55680 a50eea9c38cda3fe9b1ee07cb53b24d4 508 SMART SM00382 288 481 5.8E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_55680 a50eea9c38cda3fe9b1ee07cb53b24d4 508 SUPERFAMILY SSF52540 6 231 2.83E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_55680 a50eea9c38cda3fe9b1ee07cb53b24d4 508 ProSitePatterns PS00211 ABC transporters family signature. 406 420 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_70220 9ce998416533e53b5d42cb111fae3424 297 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 34 230 1.8E-42 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AMIS_70220 9ce998416533e53b5d42cb111fae3424 297 Pfam PF10502 Signal peptidase, peptidase S26 129 226 9.6E-9 T 14-10-2018 IPR019533 Peptidase S26 AMIS_70220 9ce998416533e53b5d42cb111fae3424 297 SUPERFAMILY SSF51306 46 236 3.4E-50 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily AMIS_70220 9ce998416533e53b5d42cb111fae3424 297 Pfam PF00717 Peptidase S24-like 54 96 3.5E-9 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AMIS_70220 9ce998416533e53b5d42cb111fae3424 297 Gene3D G3DSA:2.10.109.10 174 244 9.6E-12 T 14-10-2018 AMIS_70220 9ce998416533e53b5d42cb111fae3424 297 Gene3D G3DSA:2.10.109.10 44 160 1.4E-19 T 14-10-2018 AMIS_70220 9ce998416533e53b5d42cb111fae3424 297 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 190 209 2.1E-20 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AMIS_70220 9ce998416533e53b5d42cb111fae3424 297 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 130 142 2.1E-20 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AMIS_70220 9ce998416533e53b5d42cb111fae3424 297 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 48 64 2.1E-20 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AMIS_16090 de4d832e73c033717e1eb912bdb995c3 326 Gene3D G3DSA:3.10.28.10 1 214 1.4E-23 T 14-10-2018 IPR027434 Homing endonuclease AMIS_16090 de4d832e73c033717e1eb912bdb995c3 326 Pfam PF02650 WhiA C-terminal HTH domain 221 303 1.9E-18 T 14-10-2018 IPR023054 Sporulation regulator WhiA, C-terminal AMIS_16090 de4d832e73c033717e1eb912bdb995c3 326 TIGRFAM TIGR00647 DNA_bind_WhiA: DNA-binding protein WhiA 4 304 7.1E-104 T 14-10-2018 IPR033981 Sporulation regulator WhiA-like AMIS_16090 de4d832e73c033717e1eb912bdb995c3 326 Hamap MF_01420 Putative sporulation transcription regulator WhiA [whiA]. 3 306 30.273 T 14-10-2018 IPR003802 Sporulation regulator WhiA GO:0043937 AMIS_16090 de4d832e73c033717e1eb912bdb995c3 326 Pfam PF10298 WhiA N-terminal LAGLIDADG-like domain 19 104 1.0E-27 T 14-10-2018 IPR018478 Sporulation transcription regulator WhiA, N-terminal domain AMIS_16090 de4d832e73c033717e1eb912bdb995c3 326 Gene3D G3DSA:1.10.10.10 216 307 8.7E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_16090 de4d832e73c033717e1eb912bdb995c3 326 Pfam PF14527 WhiA LAGLIDADG-like domain 128 218 6.2E-25 T 14-10-2018 IPR039518 WhiA, LAGLIDADG-like domain AMIS_72350 173863eded1b7acaa306321f9d1039e0 199 Gene3D G3DSA:1.10.357.10 52 190 2.1E-31 T 14-10-2018 AMIS_72350 173863eded1b7acaa306321f9d1039e0 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 5.1E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_72350 173863eded1b7acaa306321f9d1039e0 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 5.1E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_72350 173863eded1b7acaa306321f9d1039e0 199 Gene3D G3DSA:1.10.10.60 2 50 2.0E-19 T 14-10-2018 AMIS_72350 173863eded1b7acaa306321f9d1039e0 199 SUPERFAMILY SSF46689 3 73 4.0E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_72350 173863eded1b7acaa306321f9d1039e0 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 55 2.3E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_78220 20d7f29def559b1ff7f5a9a4daede71c 1212 SUPERFAMILY SSF48452 771 967 1.04E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_78220 20d7f29def559b1ff7f5a9a4daede71c 1212 SUPERFAMILY SSF48452 950 1087 1.25E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_78220 20d7f29def559b1ff7f5a9a4daede71c 1212 SUPERFAMILY SSF55073 36 218 2.98E-47 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_78220 20d7f29def559b1ff7f5a9a4daede71c 1212 SMART SM00028 986 1019 340.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_78220 20d7f29def559b1ff7f5a9a4daede71c 1212 SMART SM00028 786 819 0.63 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_78220 20d7f29def559b1ff7f5a9a4daede71c 1212 SMART SM00028 1145 1178 170.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_78220 20d7f29def559b1ff7f5a9a4daede71c 1212 SMART SM00028 711 744 300.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_78220 20d7f29def559b1ff7f5a9a4daede71c 1212 SMART SM00044 21 208 5.4E-6 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMIS_78220 20d7f29def559b1ff7f5a9a4daede71c 1212 SUPERFAMILY SSF48452 726 1174 5.12E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_78220 20d7f29def559b1ff7f5a9a4daede71c 1212 Pfam PF13191 AAA ATPase domain 234 441 4.8E-15 T 14-10-2018 AMIS_78220 20d7f29def559b1ff7f5a9a4daede71c 1212 Gene3D G3DSA:3.30.70.1230 32 226 6.4E-52 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_78220 20d7f29def559b1ff7f5a9a4daede71c 1212 Gene3D G3DSA:1.25.40.10 750 912 5.1E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_78220 20d7f29def559b1ff7f5a9a4daede71c 1212 SUPERFAMILY SSF52540 234 515 5.85E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_78220 20d7f29def559b1ff7f5a9a4daede71c 1212 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 38 214 3.8E-22 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMIS_78220 20d7f29def559b1ff7f5a9a4daede71c 1212 Gene3D G3DSA:1.25.40.10 917 1200 8.6E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_13870 a5948940e4a93aab65658a7b2079f3b9 305 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 130 1.9E-10 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AMIS_13870 a5948940e4a93aab65658a7b2079f3b9 305 Gene3D G3DSA:3.40.50.720 1 287 2.4E-67 T 14-10-2018 AMIS_13870 a5948940e4a93aab65658a7b2079f3b9 305 SUPERFAMILY SSF51735 1 264 3.56E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_13870 a5948940e4a93aab65658a7b2079f3b9 305 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 293 5.3E-90 T 14-10-2018 IPR010099 Epimerase family protein SDR39U1 AMIS_13870 a5948940e4a93aab65658a7b2079f3b9 305 Pfam PF08338 Domain of unknown function (DUF1731) 250 295 9.2E-13 T 14-10-2018 IPR013549 Domain of unknown function DUF1731 AMIS_40000 bf9866876ed265e717a0196e87034b39 472 Pfam PF00704 Glycosyl hydrolases family 18 137 453 6.8E-26 T 14-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 AMIS_40000 bf9866876ed265e717a0196e87034b39 472 SUPERFAMILY SSF51445 134 463 3.44E-55 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_40000 bf9866876ed265e717a0196e87034b39 472 ProSitePatterns PS01095 Chitinases family 18 active site. 247 255 - T 14-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AMIS_40000 bf9866876ed265e717a0196e87034b39 472 SUPERFAMILY SSF51055 21 82 6.47E-12 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AMIS_40000 bf9866876ed265e717a0196e87034b39 472 Gene3D G3DSA:2.10.10.20 30 83 2.4E-14 T 14-10-2018 AMIS_40000 bf9866876ed265e717a0196e87034b39 472 SMART SM00495 33 79 5.9E-11 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AMIS_40000 bf9866876ed265e717a0196e87034b39 472 Gene3D G3DSA:3.20.20.80 131 472 1.2E-85 T 14-10-2018 AMIS_40000 bf9866876ed265e717a0196e87034b39 472 SMART SM00636 135 453 7.4E-7 T 14-10-2018 IPR011583 Chitinase II GO:0008061 AMIS_6760 33e4c53d6c1e61cdc8f024d4e77e8d8e 550 ProSitePatterns PS00296 Chaperonins cpn60 signature. 403 414 - T 14-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AMIS_6760 33e4c53d6c1e61cdc8f024d4e77e8d8e 550 Gene3D G3DSA:1.10.560.10 7 519 9.8E-221 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily AMIS_6760 33e4c53d6c1e61cdc8f024d4e77e8d8e 550 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 524 2.8E-236 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AMIS_6760 33e4c53d6c1e61cdc8f024d4e77e8d8e 550 SUPERFAMILY SSF48592 9 519 5.65E-74 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily AMIS_6760 33e4c53d6c1e61cdc8f024d4e77e8d8e 550 SUPERFAMILY SSF52029 183 374 7.15E-76 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily AMIS_6760 33e4c53d6c1e61cdc8f024d4e77e8d8e 550 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 522 5.4E-94 T 14-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 AMIS_6760 33e4c53d6c1e61cdc8f024d4e77e8d8e 550 Gene3D G3DSA:3.30.260.10 135 408 9.8E-221 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily AMIS_6760 33e4c53d6c1e61cdc8f024d4e77e8d8e 550 SUPERFAMILY SSF54849 136 199 5.26E-22 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily AMIS_6760 33e4c53d6c1e61cdc8f024d4e77e8d8e 550 Hamap MF_00600 60 kDa chaperonin [groL]. 1 550 40.018 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AMIS_6760 33e4c53d6c1e61cdc8f024d4e77e8d8e 550 Gene3D G3DSA:3.50.7.10 190 370 9.8E-221 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily AMIS_6760 33e4c53d6c1e61cdc8f024d4e77e8d8e 550 PRINTS PR00298 60kDa chaperonin signature 266 289 6.0E-70 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AMIS_6760 33e4c53d6c1e61cdc8f024d4e77e8d8e 550 PRINTS PR00298 60kDa chaperonin signature 82 109 6.0E-70 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AMIS_6760 33e4c53d6c1e61cdc8f024d4e77e8d8e 550 PRINTS PR00298 60kDa chaperonin signature 396 417 6.0E-70 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AMIS_6760 33e4c53d6c1e61cdc8f024d4e77e8d8e 550 PRINTS PR00298 60kDa chaperonin signature 26 52 6.0E-70 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AMIS_6760 33e4c53d6c1e61cdc8f024d4e77e8d8e 550 PRINTS PR00298 60kDa chaperonin signature 348 373 6.0E-70 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AMIS_17500 d5886cb26c9c8fbe78960c3cd463cf94 221 Pfam PF00072 Response regulator receiver domain 4 113 2.9E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_17500 d5886cb26c9c8fbe78960c3cd463cf94 221 SUPERFAMILY SSF46894 124 220 6.24E-23 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_17500 d5886cb26c9c8fbe78960c3cd463cf94 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 219 1.2E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_17500 d5886cb26c9c8fbe78960c3cd463cf94 221 Gene3D G3DSA:1.10.10.10 123 220 5.1E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_17500 d5886cb26c9c8fbe78960c3cd463cf94 221 SUPERFAMILY SSF52172 3 125 1.57E-40 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_17500 d5886cb26c9c8fbe78960c3cd463cf94 221 SMART SM00448 2 112 2.0E-43 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_17500 d5886cb26c9c8fbe78960c3cd463cf94 221 Gene3D G3DSA:3.40.50.2300 1 122 1.3E-37 T 14-10-2018 AMIS_17500 d5886cb26c9c8fbe78960c3cd463cf94 221 SMART SM00862 145 219 6.9E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_4330 a070563ad0bd272c9e48c2c528480aed 505 Gene3D G3DSA:2.150.10.10 106 181 8.1E-12 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_4330 a070563ad0bd272c9e48c2c528480aed 505 Gene3D G3DSA:2.150.10.10 396 498 4.7E-7 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_4330 a070563ad0bd272c9e48c2c528480aed 505 SUPERFAMILY SSF51120 105 267 1.2E-19 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_4330 a070563ad0bd272c9e48c2c528480aed 505 SUPERFAMILY SSF51120 240 465 1.05E-14 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_4330 a070563ad0bd272c9e48c2c528480aed 505 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 177 195 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site AMIS_4330 a070563ad0bd272c9e48c2c528480aed 505 Gene3D G3DSA:2.150.10.10 182 287 1.3E-14 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_4330 a070563ad0bd272c9e48c2c528480aed 505 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 159 177 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site AMIS_4330 a070563ad0bd272c9e48c2c528480aed 505 Gene3D G3DSA:2.150.10.10 288 395 5.0E-10 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_4330 a070563ad0bd272c9e48c2c528480aed 505 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 180 196 0.0044 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_4330 a070563ad0bd272c9e48c2c528480aed 505 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 239 255 0.96 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_4330 a070563ad0bd272c9e48c2c528480aed 505 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 163 179 4.5E-4 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_4330 a070563ad0bd272c9e48c2c528480aed 505 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 453 462 11.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_4330 a070563ad0bd272c9e48c2c528480aed 505 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 358 370 12.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_4330 a070563ad0bd272c9e48c2c528480aed 505 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 127 141 11.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_4330 a070563ad0bd272c9e48c2c528480aed 505 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 311 327 0.57 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_4330 a070563ad0bd272c9e48c2c528480aed 505 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 293 304 30.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_4330 a070563ad0bd272c9e48c2c528480aed 505 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 199 215 0.85 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_4330 a070563ad0bd272c9e48c2c528480aed 505 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 329 344 0.36 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_4330 a070563ad0bd272c9e48c2c528480aed 505 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 145 161 0.27 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_4330 a070563ad0bd272c9e48c2c528480aed 505 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 436 449 10.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_4330 a070563ad0bd272c9e48c2c528480aed 505 PRINTS PR00313 NodO calcium binding signature 190 198 1.3E-11 T 14-10-2018 AMIS_4330 a070563ad0bd272c9e48c2c528480aed 505 PRINTS PR00313 NodO calcium binding signature 160 171 1.3E-11 T 14-10-2018 AMIS_4330 a070563ad0bd272c9e48c2c528480aed 505 PRINTS PR00313 NodO calcium binding signature 172 180 1.3E-11 T 14-10-2018 AMIS_4330 a070563ad0bd272c9e48c2c528480aed 505 PRINTS PR00313 NodO calcium binding signature 248 257 1.3E-11 T 14-10-2018 AMIS_14890 eaa8836fbfaef337f15c22015c9201f3 572 SUPERFAMILY SSF53300 365 564 9.06E-19 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMIS_14890 eaa8836fbfaef337f15c22015c9201f3 572 Pfam PF13531 Bacterial extracellular solute-binding protein 81 328 3.0E-16 T 14-10-2018 AMIS_14890 eaa8836fbfaef337f15c22015c9201f3 572 Pfam PF00092 von Willebrand factor type A domain 366 562 2.8E-6 T 14-10-2018 IPR002035 von Willebrand factor, type A AMIS_14890 eaa8836fbfaef337f15c22015c9201f3 572 Gene3D G3DSA:3.40.50.410 365 567 7.9E-27 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMIS_14890 eaa8836fbfaef337f15c22015c9201f3 572 SMART SM00327 363 563 9.3E-9 T 14-10-2018 IPR002035 von Willebrand factor, type A AMIS_16710 607774fcf50d9288d62612e58cf65d7b 351 TIGRFAM TIGR00109 hemH: ferrochelatase 14 318 6.7E-46 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AMIS_16710 607774fcf50d9288d62612e58cf65d7b 351 Hamap MF_00323 Ferrochelatase [hemH]. 10 319 30.685 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AMIS_16710 607774fcf50d9288d62612e58cf65d7b 351 ProSitePatterns PS00534 Ferrochelatase signature. 184 206 - T 14-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AMIS_16710 607774fcf50d9288d62612e58cf65d7b 351 Gene3D G3DSA:3.40.50.1400 15 315 1.9E-120 T 14-10-2018 AMIS_16710 607774fcf50d9288d62612e58cf65d7b 351 Gene3D G3DSA:3.40.50.1400 154 300 1.9E-120 T 14-10-2018 AMIS_16710 607774fcf50d9288d62612e58cf65d7b 351 Pfam PF00762 Ferrochelatase 12 318 8.8E-98 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AMIS_16710 607774fcf50d9288d62612e58cf65d7b 351 SUPERFAMILY SSF53800 12 343 2.45E-87 T 14-10-2018 AMIS_69510 1050a3829cf295faeef545f922270046 252 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 8 112 1.2E-24 T 14-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMIS_69510 1050a3829cf295faeef545f922270046 252 SUPERFAMILY SSF51735 6 137 4.35E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_69510 1050a3829cf295faeef545f922270046 252 SUPERFAMILY SSF55347 113 223 7.41E-37 T 14-10-2018 AMIS_69510 1050a3829cf295faeef545f922270046 252 Gene3D G3DSA:3.30.360.10 113 221 1.6E-83 T 14-10-2018 AMIS_69510 1050a3829cf295faeef545f922270046 252 Gene3D G3DSA:3.40.50.720 10 242 1.6E-83 T 14-10-2018 AMIS_69510 1050a3829cf295faeef545f922270046 252 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 49 252 4.3E-58 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMIS_69510 1050a3829cf295faeef545f922270046 252 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 8 252 29.21 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMIS_69510 1050a3829cf295faeef545f922270046 252 PIRSF PIRSF000161 6 252 7.8E-64 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMIS_69510 1050a3829cf295faeef545f922270046 252 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 134 151 - T 14-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMIS_69510 1050a3829cf295faeef545f922270046 252 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 115 247 2.8E-31 T 14-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMIS_77980 352fc94950193692d71dc5440ff3e45a 106 Gene3D G3DSA:1.10.287.1060 1 101 1.2E-8 T 14-10-2018 AMIS_77980 352fc94950193692d71dc5440ff3e45a 106 SUPERFAMILY SSF140453 4 101 4.45E-5 T 14-10-2018 IPR036689 ESAT-6-like superfamily AMIS_52630 8840a7858d1df606a53d7cf1251ea2ef 464 Pfam PF00884 Sulfatase 48 372 9.3E-78 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 AMIS_52630 8840a7858d1df606a53d7cf1251ea2ef 464 Gene3D G3DSA:3.40.720.10 45 393 2.4E-106 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AMIS_52630 8840a7858d1df606a53d7cf1251ea2ef 464 Gene3D G3DSA:3.30.1120.10 395 462 3.0E-16 T 14-10-2018 AMIS_52630 8840a7858d1df606a53d7cf1251ea2ef 464 SUPERFAMILY SSF53649 46 457 5.38E-125 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AMIS_52630 8840a7858d1df606a53d7cf1251ea2ef 464 ProSitePatterns PS00149 Sulfatases signature 2. 144 154 - T 14-10-2018 IPR024607 Sulfatase, conserved site AMIS_13080 2f92dc7e3de1b871c35cdaaa0b96fbc7 80 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 6 79 3.6E-21 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 AMIS_13080 2f92dc7e3de1b871c35cdaaa0b96fbc7 80 Gene3D G3DSA:1.10.1200.10 1 80 3.4E-25 T 14-10-2018 IPR036736 ACP-like superfamily AMIS_13080 2f92dc7e3de1b871c35cdaaa0b96fbc7 80 SUPERFAMILY SSF47336 2 79 1.31E-21 T 14-10-2018 IPR036736 ACP-like superfamily AMIS_13080 2f92dc7e3de1b871c35cdaaa0b96fbc7 80 Hamap MF_01217 Acyl carrier protein [acpP]. 6 80 17.07 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 AMIS_13080 2f92dc7e3de1b871c35cdaaa0b96fbc7 80 Pfam PF00550 Phosphopantetheine attachment site 11 76 1.4E-14 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain AMIS_13080 2f92dc7e3de1b871c35cdaaa0b96fbc7 80 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 37 77 3.0E-13 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 AMIS_67390 934b48877f13ebb9478263e0397d3270 525 Pfam PF00175 Oxidoreductase NAD-binding domain 409 503 6.3E-8 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AMIS_67390 934b48877f13ebb9478263e0397d3270 525 Pfam PF01794 Ferric reductase like transmembrane component 135 257 6.8E-16 T 14-10-2018 IPR013130 Ferric reductase transmembrane component-like domain AMIS_67390 934b48877f13ebb9478263e0397d3270 525 Pfam PF08022 FAD-binding domain 320 381 2.6E-8 T 14-10-2018 IPR013112 FAD-binding 8 GO:0016491|GO:0055114 AMIS_67390 934b48877f13ebb9478263e0397d3270 525 Gene3D G3DSA:2.40.30.10 299 395 9.3E-10 T 14-10-2018 AMIS_67390 934b48877f13ebb9478263e0397d3270 525 PRINTS PR00410 Phenol hydroxylase reductase family signature 491 499 3.9E-11 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AMIS_67390 934b48877f13ebb9478263e0397d3270 525 PRINTS PR00410 Phenol hydroxylase reductase family signature 392 401 3.9E-11 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AMIS_67390 934b48877f13ebb9478263e0397d3270 525 PRINTS PR00410 Phenol hydroxylase reductase family signature 408 427 3.9E-11 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AMIS_67390 934b48877f13ebb9478263e0397d3270 525 Gene3D G3DSA:3.40.50.80 398 525 4.1E-23 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMIS_67390 934b48877f13ebb9478263e0397d3270 525 SUPERFAMILY SSF63380 302 398 1.06E-13 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AMIS_67390 934b48877f13ebb9478263e0397d3270 525 SUPERFAMILY SSF52343 388 521 5.24E-26 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMIS_54310 51ddfd1f3c444c1fe58ee9f26dd3ae93 716 Gene3D G3DSA:3.40.50.300 3 203 3.3E-55 T 14-10-2018 AMIS_54310 51ddfd1f3c444c1fe58ee9f26dd3ae93 716 SMART SM00327 531 699 6.1E-16 T 14-10-2018 IPR002035 von Willebrand factor, type A AMIS_54310 51ddfd1f3c444c1fe58ee9f26dd3ae93 716 Pfam PF13519 von Willebrand factor type A domain 535 641 7.3E-16 T 14-10-2018 IPR002035 von Willebrand factor, type A AMIS_54310 51ddfd1f3c444c1fe58ee9f26dd3ae93 716 SUPERFAMILY SSF53300 535 658 3.26E-22 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMIS_54310 51ddfd1f3c444c1fe58ee9f26dd3ae93 716 Pfam PF01078 Magnesium chelatase, subunit ChlI 114 183 5.0E-8 T 14-10-2018 IPR000523 Magnesium chelatase ChlI domain AMIS_54310 51ddfd1f3c444c1fe58ee9f26dd3ae93 716 SUPERFAMILY SSF52540 4 327 2.08E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_54310 51ddfd1f3c444c1fe58ee9f26dd3ae93 716 Gene3D G3DSA:1.10.8.80 248 337 2.7E-30 T 14-10-2018 AMIS_54310 51ddfd1f3c444c1fe58ee9f26dd3ae93 716 SMART SM00382 28 225 2.7E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_54310 51ddfd1f3c444c1fe58ee9f26dd3ae93 716 Gene3D G3DSA:3.40.50.410 535 684 2.3E-23 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMIS_5940 7f972ee43f49309087f2953916de567a 1146 Pfam PF00562 RNA polymerase Rpb2, domain 6 611 1029 1.5E-159 T 14-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMIS_5940 7f972ee43f49309087f2953916de567a 1146 Gene3D G3DSA:2.40.270.10 24 1007 0.0 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMIS_5940 7f972ee43f49309087f2953916de567a 1146 ProSitePatterns PS01166 RNA polymerases beta chain signature. 850 862 - T 14-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMIS_5940 7f972ee43f49309087f2953916de567a 1146 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 235 824 0.0 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMIS_5940 7f972ee43f49309087f2953916de567a 1146 Gene3D G3DSA:2.30.150.10 487 554 0.0 T 14-10-2018 AMIS_5940 7f972ee43f49309087f2953916de567a 1146 Pfam PF04561 RNA polymerase Rpb2, domain 2 161 347 1.9E-28 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMIS_5940 7f972ee43f49309087f2953916de567a 1146 Gene3D G3DSA:2.40.50.150 722 848 0.0 T 14-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMIS_5940 7f972ee43f49309087f2953916de567a 1146 Pfam PF04563 RNA polymerase beta subunit 35 391 2.6E-21 T 14-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMIS_5940 7f972ee43f49309087f2953916de567a 1146 SUPERFAMILY SSF64484 20 1115 0.0 T 14-10-2018 AMIS_5940 7f972ee43f49309087f2953916de567a 1146 Pfam PF04565 RNA polymerase Rpb2, domain 3 406 474 1.1E-28 T 14-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMIS_5940 7f972ee43f49309087f2953916de567a 1146 Gene3D G3DSA:3.90.1110.10 166 341 0.0 T 14-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMIS_5940 7f972ee43f49309087f2953916de567a 1146 Pfam PF10385 RNA polymerase beta subunit external 1 domain 484 550 2.4E-23 T 14-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMIS_5940 7f972ee43f49309087f2953916de567a 1146 Gene3D G3DSA:2.40.50.100 612 686 0.0 T 14-10-2018 AMIS_5940 7f972ee43f49309087f2953916de567a 1146 Gene3D G3DSA:3.90.1100.10 26 611 0.0 T 14-10-2018 AMIS_5940 7f972ee43f49309087f2953916de567a 1146 Gene3D G3DSA:3.90.1800.10 1016 1070 2.3E-10 T 14-10-2018 AMIS_5940 7f972ee43f49309087f2953916de567a 1146 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 21 1107 12.25 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMIS_5940 7f972ee43f49309087f2953916de567a 1146 Pfam PF04560 RNA polymerase Rpb2, domain 7 1031 1105 2.7E-26 T 14-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMIS_17670 28a171ceca3194affd62aac4c82e8275 780 Gene3D G3DSA:3.30.450.40 24 168 1.7E-22 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_17670 28a171ceca3194affd62aac4c82e8275 780 Gene3D G3DSA:3.30.450.20 410 534 1.1E-27 T 14-10-2018 AMIS_17670 28a171ceca3194affd62aac4c82e8275 780 SMART SM00086 494 536 9.2E-8 T 14-10-2018 IPR001610 PAC motif AMIS_17670 28a171ceca3194affd62aac4c82e8275 780 SMART SM00086 367 409 11.0 T 14-10-2018 IPR001610 PAC motif AMIS_17670 28a171ceca3194affd62aac4c82e8275 780 SMART SM00086 248 288 0.52 T 14-10-2018 IPR001610 PAC motif AMIS_17670 28a171ceca3194affd62aac4c82e8275 780 Pfam PF00512 His Kinase A (phospho-acceptor) domain 572 622 9.0E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_17670 28a171ceca3194affd62aac4c82e8275 780 Gene3D G3DSA:3.30.450.20 290 409 1.0E-20 T 14-10-2018 AMIS_17670 28a171ceca3194affd62aac4c82e8275 780 Gene3D G3DSA:3.30.450.20 169 289 3.8E-25 T 14-10-2018 AMIS_17670 28a171ceca3194affd62aac4c82e8275 780 SMART SM00387 673 780 7.9E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_17670 28a171ceca3194affd62aac4c82e8275 780 Pfam PF01590 GAF domain 27 157 3.8E-12 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_17670 28a171ceca3194affd62aac4c82e8275 780 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 297 416 3.1E-13 T 14-10-2018 IPR000014 PAS domain AMIS_17670 28a171ceca3194affd62aac4c82e8275 780 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 417 542 1.8E-25 T 14-10-2018 IPR000014 PAS domain AMIS_17670 28a171ceca3194affd62aac4c82e8275 780 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 168 294 2.1E-19 T 14-10-2018 IPR000014 PAS domain AMIS_17670 28a171ceca3194affd62aac4c82e8275 780 SUPERFAMILY SSF55785 182 297 3.66E-22 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_17670 28a171ceca3194affd62aac4c82e8275 780 SUPERFAMILY SSF55781 27 167 3.27E-24 T 14-10-2018 AMIS_17670 28a171ceca3194affd62aac4c82e8275 780 PRINTS PR00344 Bacterial sensor protein C-terminal signature 740 758 2.4E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_17670 28a171ceca3194affd62aac4c82e8275 780 PRINTS PR00344 Bacterial sensor protein C-terminal signature 708 722 2.4E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_17670 28a171ceca3194affd62aac4c82e8275 780 PRINTS PR00344 Bacterial sensor protein C-terminal signature 726 736 2.4E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_17670 28a171ceca3194affd62aac4c82e8275 780 SUPERFAMILY SSF55785 308 417 1.2E-20 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_17670 28a171ceca3194affd62aac4c82e8275 780 SMART SM00091 171 238 1.1E-7 T 14-10-2018 IPR000014 PAS domain AMIS_17670 28a171ceca3194affd62aac4c82e8275 780 SMART SM00091 421 487 2.4E-9 T 14-10-2018 IPR000014 PAS domain AMIS_17670 28a171ceca3194affd62aac4c82e8275 780 SMART SM00091 296 361 1.3E-7 T 14-10-2018 IPR000014 PAS domain AMIS_17670 28a171ceca3194affd62aac4c82e8275 780 Gene3D G3DSA:1.10.287.130 535 632 3.5E-14 T 14-10-2018 AMIS_17670 28a171ceca3194affd62aac4c82e8275 780 SMART SM00388 570 635 4.9E-6 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_17670 28a171ceca3194affd62aac4c82e8275 780 SMART SM00065 22 167 6.8E-13 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_17670 28a171ceca3194affd62aac4c82e8275 780 Gene3D G3DSA:3.30.565.10 643 779 2.1E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_17670 28a171ceca3194affd62aac4c82e8275 780 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 676 777 2.5E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_17670 28a171ceca3194affd62aac4c82e8275 780 SUPERFAMILY SSF55874 628 776 6.81E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_17670 28a171ceca3194affd62aac4c82e8275 780 SUPERFAMILY SSF55785 406 534 2.26E-30 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_17670 28a171ceca3194affd62aac4c82e8275 780 SUPERFAMILY SSF47384 556 628 2.94E-10 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_17670 28a171ceca3194affd62aac4c82e8275 780 Pfam PF00989 PAS fold 173 285 9.0E-15 T 14-10-2018 IPR013767 PAS fold GO:0006355 AMIS_17670 28a171ceca3194affd62aac4c82e8275 780 Pfam PF00989 PAS fold 422 533 3.5E-14 T 14-10-2018 IPR013767 PAS fold GO:0006355 AMIS_17670 28a171ceca3194affd62aac4c82e8275 780 Pfam PF00989 PAS fold 300 394 9.5E-10 T 14-10-2018 IPR013767 PAS fold GO:0006355 AMIS_14180 526de53cab1133e412829ce81bebbbe3 352 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 8 344 33.504 T 14-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 AMIS_14180 526de53cab1133e412829ce81bebbbe3 352 Pfam PF02885 Glycosyl transferase family, helical bundle domain 9 68 3.0E-19 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 AMIS_14180 526de53cab1133e412829ce81bebbbe3 352 Pfam PF00591 Glycosyl transferase family, a/b domain 81 333 5.4E-80 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AMIS_14180 526de53cab1133e412829ce81bebbbe3 352 SUPERFAMILY SSF52418 82 344 1.44E-78 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 AMIS_14180 526de53cab1133e412829ce81bebbbe3 352 Gene3D G3DSA:3.40.1030.10 80 351 2.5E-94 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 AMIS_14180 526de53cab1133e412829ce81bebbbe3 352 SUPERFAMILY SSF47648 6 72 6.8E-17 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 AMIS_14180 526de53cab1133e412829ce81bebbbe3 352 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 12 343 2.8E-105 T 14-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 AMIS_14180 526de53cab1133e412829ce81bebbbe3 352 Gene3D G3DSA:1.20.970.10 4 69 7.5E-27 T 14-10-2018 AMIS_12920 b119f1a9cd1adee6d08e57e6f1683c7f 480 Gene3D G3DSA:1.10.510.10 103 274 2.8E-47 T 14-10-2018 AMIS_12920 b119f1a9cd1adee6d08e57e6f1683c7f 480 SMART SM00220 12 271 6.4E-50 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMIS_12920 b119f1a9cd1adee6d08e57e6f1683c7f 480 SUPERFAMILY SSF56112 9 273 1.24E-72 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMIS_12920 b119f1a9cd1adee6d08e57e6f1683c7f 480 Pfam PF00069 Protein kinase domain 13 261 2.4E-42 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMIS_12920 b119f1a9cd1adee6d08e57e6f1683c7f 480 Gene3D G3DSA:3.30.200.20 2 97 3.3E-28 T 14-10-2018 AMIS_12920 b119f1a9cd1adee6d08e57e6f1683c7f 480 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 136 148 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 AMIS_70240 a8be3c5e3c2019ea450486325aa5fb2b 254 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 254 99.227 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AMIS_70240 a8be3c5e3c2019ea450486325aa5fb2b 254 Gene3D G3DSA:1.10.1270.20 164 246 8.7E-29 T 14-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AMIS_70240 a8be3c5e3c2019ea450486325aa5fb2b 254 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 230 8.3E-74 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AMIS_70240 a8be3c5e3c2019ea450486325aa5fb2b 254 SUPERFAMILY SSF75217 2 237 5.95E-89 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases AMIS_70240 a8be3c5e3c2019ea450486325aa5fb2b 254 Gene3D G3DSA:3.40.1280.10 1 163 1.0E-64 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMIS_70240 a8be3c5e3c2019ea450486325aa5fb2b 254 PIRSF PIRSF000386 1 246 3.2E-91 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AMIS_70240 a8be3c5e3c2019ea450486325aa5fb2b 254 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 22 221 2.9E-66 T 14-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AMIS_5530 03c80a5f5882baa2e1aac15d31ae935b 463 Pfam PF01019 Gamma-glutamyltranspeptidase 283 457 1.1E-26 T 14-10-2018 AMIS_5530 03c80a5f5882baa2e1aac15d31ae935b 463 Pfam PF01019 Gamma-glutamyltranspeptidase 21 249 5.5E-48 T 14-10-2018 AMIS_5530 03c80a5f5882baa2e1aac15d31ae935b 463 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 292 310 6.4E-27 T 14-10-2018 AMIS_5530 03c80a5f5882baa2e1aac15d31ae935b 463 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 28 53 6.4E-27 T 14-10-2018 AMIS_5530 03c80a5f5882baa2e1aac15d31ae935b 463 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 342 357 6.4E-27 T 14-10-2018 AMIS_5530 03c80a5f5882baa2e1aac15d31ae935b 463 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 314 332 6.4E-27 T 14-10-2018 AMIS_5530 03c80a5f5882baa2e1aac15d31ae935b 463 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 367 384 6.4E-27 T 14-10-2018 AMIS_5530 03c80a5f5882baa2e1aac15d31ae935b 463 SUPERFAMILY SSF56235 6 460 5.1E-85 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMIS_5530 03c80a5f5882baa2e1aac15d31ae935b 463 Gene3D G3DSA:3.60.20.40 292 461 8.8E-30 T 14-10-2018 AMIS_42110 038729da331e08d787c5d8b77028635c 1010 SUPERFAMILY SSF52096 759 1009 1.59E-71 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMIS_42110 038729da331e08d787c5d8b77028635c 1010 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 53 193 1.4E-11 T 14-10-2018 IPR019587 Polyketide cyclase/dehydrase AMIS_42110 038729da331e08d787c5d8b77028635c 1010 SUPERFAMILY SSF53901 252 608 1.22E-11 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_42110 038729da331e08d787c5d8b77028635c 1010 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 851 871 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 AMIS_42110 038729da331e08d787c5d8b77028635c 1010 SUPERFAMILY SSF53901 536 647 4.07E-14 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_42110 038729da331e08d787c5d8b77028635c 1010 Gene3D G3DSA:3.30.530.20 50 196 1.5E-12 T 14-10-2018 IPR023393 START-like domain superfamily AMIS_42110 038729da331e08d787c5d8b77028635c 1010 Pfam PF00378 Enoyl-CoA hydratase/isomerase 769 1009 3.9E-50 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AMIS_42110 038729da331e08d787c5d8b77028635c 1010 Gene3D G3DSA:2.40.50.840 675 746 9.0E-9 T 14-10-2018 AMIS_42110 038729da331e08d787c5d8b77028635c 1010 Gene3D G3DSA:1.10.12.10 953 1010 1.1E-18 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal AMIS_42110 038729da331e08d787c5d8b77028635c 1010 SUPERFAMILY SSF55961 53 192 2.33E-15 T 14-10-2018 AMIS_42110 038729da331e08d787c5d8b77028635c 1010 Gene3D G3DSA:3.90.226.10 748 952 1.7E-64 T 14-10-2018 AMIS_61820 cb69872b62e07811f7d840043ad4c162 353 SUPERFAMILY SSF46589 31 115 8.89E-15 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 AMIS_61820 cb69872b62e07811f7d840043ad4c162 353 Gene3D G3DSA:3.30.930.10 25 351 6.3E-104 T 14-10-2018 AMIS_61820 cb69872b62e07811f7d840043ad4c162 353 Pfam PF01409 tRNA synthetases class II core domain (F) 109 349 1.4E-93 T 14-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 AMIS_61820 cb69872b62e07811f7d840043ad4c162 353 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 37 103 2.7E-17 T 14-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AMIS_61820 cb69872b62e07811f7d840043ad4c162 353 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 25 349 42.835 T 14-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 AMIS_61820 cb69872b62e07811f7d840043ad4c162 353 SUPERFAMILY SSF55681 109 349 5.29E-69 T 14-10-2018 AMIS_19410 e64a822fc8f6b6d9659d49fefacbcd54 331 Gene3D G3DSA:3.40.47.10 1 329 1.4E-31 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_19410 e64a822fc8f6b6d9659d49fefacbcd54 331 SUPERFAMILY SSF53901 84 275 1.24E-10 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_19410 e64a822fc8f6b6d9659d49fefacbcd54 331 SUPERFAMILY SSF53901 15 209 7.76E-5 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_2140 2d9320b4cf2c408389c2aafc0246d76e 669 SUPERFAMILY SSF52540 166 661 1.53E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_2140 2d9320b4cf2c408389c2aafc0246d76e 669 Gene3D G3DSA:3.40.50.300 164 301 2.9E-8 T 14-10-2018 AMIS_2140 2d9320b4cf2c408389c2aafc0246d76e 669 Pfam PF13245 AAA domain 179 480 8.1E-8 T 14-10-2018 AMIS_2140 2d9320b4cf2c408389c2aafc0246d76e 669 Gene3D G3DSA:3.40.50.300 333 496 5.4E-7 T 14-10-2018 AMIS_2140 2d9320b4cf2c408389c2aafc0246d76e 669 Gene3D G3DSA:3.40.50.300 509 668 1.3E-16 T 14-10-2018 AMIS_31570 be285a1d22ac10c2a60f65d7b2651022 318 SMART SM00829 10 316 1.5E-11 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMIS_31570 be285a1d22ac10c2a60f65d7b2651022 318 SUPERFAMILY SSF51735 115 286 4.4E-31 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_31570 be285a1d22ac10c2a60f65d7b2651022 318 Pfam PF13602 Zinc-binding dehydrogenase 183 316 1.8E-21 T 14-10-2018 AMIS_31570 be285a1d22ac10c2a60f65d7b2651022 318 Gene3D G3DSA:3.90.180.10 8 313 2.4E-81 T 14-10-2018 AMIS_31570 be285a1d22ac10c2a60f65d7b2651022 318 SUPERFAMILY SSF50129 1 133 6.92E-29 T 14-10-2018 IPR011032 GroES-like superfamily AMIS_31570 be285a1d22ac10c2a60f65d7b2651022 318 Gene3D G3DSA:3.40.50.720 121 286 2.4E-81 T 14-10-2018 AMIS_80470 c1e9c47c876c4aead1b2e8ca508ff7d2 313 SUPERFAMILY SSF53850 8 191 2.42E-44 T 14-10-2018 AMIS_80470 c1e9c47c876c4aead1b2e8ca508ff7d2 313 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 227 234 - T 14-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AMIS_80470 c1e9c47c876c4aead1b2e8ca508ff7d2 313 PIRSF PIRSF001500 4 282 4.5E-60 T 14-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AMIS_80470 c1e9c47c876c4aead1b2e8ca508ff7d2 313 Gene3D G3DSA:3.40.190.10 96 176 4.2E-20 T 14-10-2018 AMIS_80470 c1e9c47c876c4aead1b2e8ca508ff7d2 313 Gene3D G3DSA:3.40.190.10 4 95 8.1E-29 T 14-10-2018 AMIS_80470 c1e9c47c876c4aead1b2e8ca508ff7d2 313 Pfam PF00800 Prephenate dehydratase 10 186 4.5E-44 T 14-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AMIS_80470 c1e9c47c876c4aead1b2e8ca508ff7d2 313 Pfam PF01842 ACT domain 206 264 8.2E-8 T 14-10-2018 IPR002912 ACT domain AMIS_80470 c1e9c47c876c4aead1b2e8ca508ff7d2 313 Gene3D G3DSA:3.30.70.260 190 284 5.0E-30 T 14-10-2018 AMIS_80470 c1e9c47c876c4aead1b2e8ca508ff7d2 313 SUPERFAMILY SSF55021 188 280 1.37E-23 T 14-10-2018 AMIS_26890 658dddaaa748502691cf86f475e7c03a 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 219 1.4E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_26890 658dddaaa748502691cf86f475e7c03a 222 SMART SM00862 148 219 3.5E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_26890 658dddaaa748502691cf86f475e7c03a 222 Gene3D G3DSA:1.10.10.10 125 222 1.5E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_26890 658dddaaa748502691cf86f475e7c03a 222 SUPERFAMILY SSF52172 2 182 1.81E-38 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_26890 658dddaaa748502691cf86f475e7c03a 222 Pfam PF00072 Response regulator receiver domain 3 115 6.6E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_26890 658dddaaa748502691cf86f475e7c03a 222 Gene3D G3DSA:3.40.50.2300 1 124 3.6E-34 T 14-10-2018 AMIS_26890 658dddaaa748502691cf86f475e7c03a 222 SMART SM00448 1 115 3.0E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_41200 1378de70d0c19df162dab6d9248c4ff6 291 Gene3D G3DSA:3.40.50.300 2 227 3.3E-35 T 14-10-2018 AMIS_41200 1378de70d0c19df162dab6d9248c4ff6 291 Pfam PF00005 ABC transporter 20 157 1.3E-16 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_41200 1378de70d0c19df162dab6d9248c4ff6 291 SMART SM00382 29 216 2.3E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_41200 1378de70d0c19df162dab6d9248c4ff6 291 SUPERFAMILY SSF52540 4 221 1.87E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_15540 63c51b41c9e9a0c5d6a25b7a48359895 607 Gene3D G3DSA:3.40.50.12780 1 323 1.1E-50 T 14-10-2018 AMIS_15540 63c51b41c9e9a0c5d6a25b7a48359895 607 Pfam PF00501 AMP-binding enzyme 15 470 2.8E-93 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMIS_15540 63c51b41c9e9a0c5d6a25b7a48359895 607 Gene3D G3DSA:3.40.50.12780 324 466 9.7E-39 T 14-10-2018 AMIS_15540 63c51b41c9e9a0c5d6a25b7a48359895 607 ProSitePatterns PS00455 Putative AMP-binding domain signature. 187 198 - T 14-10-2018 IPR020845 AMP-binding, conserved site AMIS_15540 63c51b41c9e9a0c5d6a25b7a48359895 607 SUPERFAMILY SSF56801 7 601 8.24E-114 T 14-10-2018 AMIS_44810 63dcaef15edbed613433139a9d11008d 214 Gene3D G3DSA:3.40.50.12740 6 209 4.3E-69 T 14-10-2018 AMIS_44810 63dcaef15edbed613433139a9d11008d 214 SUPERFAMILY SSF52172 5 134 3.56E-33 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_44810 63dcaef15edbed613433139a9d11008d 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 202 2.5E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_44810 63dcaef15edbed613433139a9d11008d 214 Pfam PF00072 Response regulator receiver domain 9 117 1.5E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_44810 63dcaef15edbed613433139a9d11008d 214 SUPERFAMILY SSF46894 138 208 2.11E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_44810 63dcaef15edbed613433139a9d11008d 214 SMART SM00448 6 119 1.6E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_44810 63dcaef15edbed613433139a9d11008d 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 2.2E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_44810 63dcaef15edbed613433139a9d11008d 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 2.2E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_44810 63dcaef15edbed613433139a9d11008d 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 2.2E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_44810 63dcaef15edbed613433139a9d11008d 214 SMART SM00421 146 203 1.1E-24 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_70520 291591cd270d2cedf827b25da9d90c9e 265 SUPERFAMILY SSF56112 9 237 7.12E-26 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMIS_70520 291591cd270d2cedf827b25da9d90c9e 265 Gene3D G3DSA:3.90.1200.10 116 247 1.6E-9 T 14-10-2018 AMIS_70520 291591cd270d2cedf827b25da9d90c9e 265 Pfam PF01636 Phosphotransferase enzyme family 38 173 2.8E-13 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase AMIS_43040 ee7bc588bfc0d7691094b7e68b9b3863 224 Pfam PF00196 Bacterial regulatory proteins, luxR family 164 218 1.6E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_43040 ee7bc588bfc0d7691094b7e68b9b3863 224 SUPERFAMILY SSF46894 151 224 2.31E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_43040 ee7bc588bfc0d7691094b7e68b9b3863 224 Gene3D G3DSA:1.10.10.10 110 224 4.3E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_43040 ee7bc588bfc0d7691094b7e68b9b3863 224 SMART SM00421 161 218 1.1E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_43040 ee7bc588bfc0d7691094b7e68b9b3863 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 178 2.6E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_43040 ee7bc588bfc0d7691094b7e68b9b3863 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 194 206 2.6E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_43040 ee7bc588bfc0d7691094b7e68b9b3863 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 194 2.6E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_43040 ee7bc588bfc0d7691094b7e68b9b3863 224 ProSitePatterns PS00622 LuxR-type HTH domain signature. 178 205 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_24050 e42d31f4de06d6bec776a96cecf285e8 110 SUPERFAMILY SSF56349 18 73 1.77E-5 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMIS_24050 e42d31f4de06d6bec776a96cecf285e8 110 Gene3D G3DSA:1.10.443.10 7 80 7.0E-6 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AMIS_78630 9a61257f40ff175c3b786a55fac68d56 252 Gene3D G3DSA:2.70.70.10 85 213 3.0E-14 T 14-10-2018 IPR011055 Duplicated hybrid motif AMIS_78630 9a61257f40ff175c3b786a55fac68d56 252 Pfam PF01551 Peptidase family M23 107 204 1.3E-9 T 14-10-2018 IPR016047 Peptidase M23 AMIS_78630 9a61257f40ff175c3b786a55fac68d56 252 SUPERFAMILY SSF51261 98 203 3.61E-11 T 14-10-2018 IPR011055 Duplicated hybrid motif AMIS_12280 93ed0fa34f873511d7eb1452d3769363 266 PIRSF PIRSF006648 11 264 1.4E-25 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AMIS_12280 93ed0fa34f873511d7eb1452d3769363 266 Pfam PF01061 ABC-2 type transporter 33 229 2.5E-17 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 AMIS_12280 93ed0fa34f873511d7eb1452d3769363 266 PRINTS PR00164 ABC-2 type transport system membrane protein signature 35 56 1.3E-15 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AMIS_12280 93ed0fa34f873511d7eb1452d3769363 266 PRINTS PR00164 ABC-2 type transport system membrane protein signature 115 140 1.3E-15 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AMIS_12280 93ed0fa34f873511d7eb1452d3769363 266 PRINTS PR00164 ABC-2 type transport system membrane protein signature 152 176 1.3E-15 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AMIS_12280 93ed0fa34f873511d7eb1452d3769363 266 PRINTS PR00164 ABC-2 type transport system membrane protein signature 208 227 1.3E-15 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AMIS_12280 93ed0fa34f873511d7eb1452d3769363 266 PRINTS PR00164 ABC-2 type transport system membrane protein signature 188 207 1.3E-15 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AMIS_25380 e3dcba21fc4a3af84885983ce95d7244 297 Gene3D G3DSA:3.40.50.300 4 287 6.2E-50 T 14-10-2018 AMIS_25380 e3dcba21fc4a3af84885983ce95d7244 297 SUPERFAMILY SSF52540 12 282 8.35E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_25380 e3dcba21fc4a3af84885983ce95d7244 297 Pfam PF00685 Sulfotransferase domain 24 263 2.6E-32 T 14-10-2018 IPR000863 Sulfotransferase domain GO:0008146 AMIS_8850 be1e460212b4c7125fae9b46f1bc8c78 370 Gene3D G3DSA:3.30.70.1660 129 357 1.3E-87 T 14-10-2018 AMIS_8850 be1e460212b4c7125fae9b46f1bc8c78 370 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 4 363 3.0E-150 T 14-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 AMIS_8850 be1e460212b4c7125fae9b46f1bc8c78 370 Pfam PF00472 RF-1 domain 229 336 6.9E-37 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AMIS_8850 be1e460212b4c7125fae9b46f1bc8c78 370 SUPERFAMILY SSF75620 30 368 7.72E-122 T 14-10-2018 AMIS_8850 be1e460212b4c7125fae9b46f1bc8c78 370 Pfam PF03462 PCRF domain 32 219 8.6E-56 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 AMIS_8850 be1e460212b4c7125fae9b46f1bc8c78 370 SMART SM00937 84 194 2.2E-46 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 AMIS_8850 be1e460212b4c7125fae9b46f1bc8c78 370 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 2 364 36.854 T 14-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 AMIS_8850 be1e460212b4c7125fae9b46f1bc8c78 370 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 244 260 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AMIS_8850 be1e460212b4c7125fae9b46f1bc8c78 370 Gene3D G3DSA:3.30.160.20 225 319 1.3E-87 T 14-10-2018 AMIS_8850 be1e460212b4c7125fae9b46f1bc8c78 370 Gene3D G3DSA:1.20.58.410 3 115 2.9E-24 T 14-10-2018 AMIS_56060 c027f8e481e91fae7d81ca759f93a0ef 296 Gene3D G3DSA:3.40.190.290 93 295 1.5E-32 T 14-10-2018 AMIS_56060 c027f8e481e91fae7d81ca759f93a0ef 296 SUPERFAMILY SSF46785 2 111 2.01E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_56060 c027f8e481e91fae7d81ca759f93a0ef 296 Pfam PF03466 LysR substrate binding domain 89 294 2.8E-30 T 14-10-2018 IPR005119 LysR, substrate-binding AMIS_56060 c027f8e481e91fae7d81ca759f93a0ef 296 Gene3D G3DSA:1.10.10.10 1 92 7.8E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_56060 c027f8e481e91fae7d81ca759f93a0ef 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 9.7E-13 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_56060 c027f8e481e91fae7d81ca759f93a0ef 296 SUPERFAMILY SSF53850 90 294 3.41E-28 T 14-10-2018 AMIS_78370 e053fdeed85a14a633e1def44b4fab6b 354 Gene3D G3DSA:3.30.360.10 128 329 2.7E-124 T 14-10-2018 AMIS_78370 e053fdeed85a14a633e1def44b4fab6b 354 SUPERFAMILY SSF55347 129 333 2.56E-61 T 14-10-2018 AMIS_78370 e053fdeed85a14a633e1def44b4fab6b 354 SMART SM00859 5 120 2.1E-36 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AMIS_78370 e053fdeed85a14a633e1def44b4fab6b 354 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 118 9.0E-29 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AMIS_78370 e053fdeed85a14a633e1def44b4fab6b 354 SUPERFAMILY SSF51735 6 157 1.7E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_78370 e053fdeed85a14a633e1def44b4fab6b 354 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 3 346 32.543 T 14-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AMIS_78370 e053fdeed85a14a633e1def44b4fab6b 354 Gene3D G3DSA:3.40.50.720 7 343 2.7E-124 T 14-10-2018 AMIS_78370 e053fdeed85a14a633e1def44b4fab6b 354 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 243 257 - T 14-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AMIS_78370 e053fdeed85a14a633e1def44b4fab6b 354 PIRSF PIRSF000148 3 350 4.5E-109 T 14-10-2018 AMIS_78370 e053fdeed85a14a633e1def44b4fab6b 354 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 140 331 8.1E-40 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AMIS_78370 e053fdeed85a14a633e1def44b4fab6b 354 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 6 347 5.6E-110 T 14-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AMIS_68730 7e1b510ba370340ecd661cc28cf87ccb 290 SUPERFAMILY SSF53335 81 275 4.93E-44 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_68730 7e1b510ba370340ecd661cc28cf87ccb 290 Pfam PF01739 CheR methyltransferase, SAM binding domain 81 273 9.0E-52 T 14-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal AMIS_68730 7e1b510ba370340ecd661cc28cf87ccb 290 SUPERFAMILY SSF47757 9 80 5.23E-14 T 14-10-2018 AMIS_68730 7e1b510ba370340ecd661cc28cf87ccb 290 PRINTS PR00996 Glutamate methyltransferase family signature 223 237 3.1E-35 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMIS_68730 7e1b510ba370340ecd661cc28cf87ccb 290 PRINTS PR00996 Glutamate methyltransferase family signature 74 86 3.1E-35 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMIS_68730 7e1b510ba370340ecd661cc28cf87ccb 290 PRINTS PR00996 Glutamate methyltransferase family signature 118 138 3.1E-35 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMIS_68730 7e1b510ba370340ecd661cc28cf87ccb 290 PRINTS PR00996 Glutamate methyltransferase family signature 35 48 3.1E-35 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMIS_68730 7e1b510ba370340ecd661cc28cf87ccb 290 PRINTS PR00996 Glutamate methyltransferase family signature 153 169 3.1E-35 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMIS_68730 7e1b510ba370340ecd661cc28cf87ccb 290 PRINTS PR00996 Glutamate methyltransferase family signature 242 265 3.1E-35 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMIS_68730 7e1b510ba370340ecd661cc28cf87ccb 290 Pfam PF03705 CheR methyltransferase, all-alpha domain 14 65 1.1E-8 T 14-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AMIS_68730 7e1b510ba370340ecd661cc28cf87ccb 290 Gene3D G3DSA:3.40.50.150 80 285 2.4E-53 T 14-10-2018 AMIS_68730 7e1b510ba370340ecd661cc28cf87ccb 290 SMART SM00138 13 283 8.7E-76 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMIS_68730 7e1b510ba370340ecd661cc28cf87ccb 290 Gene3D G3DSA:1.10.155.10 5 79 1.7E-12 T 14-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily AMIS_77690 d72ad3b13ce236d9dfde1d46824c0b5e 840 SMART SM00382 205 349 2.3E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_77690 d72ad3b13ce236d9dfde1d46824c0b5e 840 SMART SM00382 542 697 3.0E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_77690 d72ad3b13ce236d9dfde1d46824c0b5e 840 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 16 68 1.7E-18 T 14-10-2018 IPR004176 Clp, N-terminal AMIS_77690 d72ad3b13ce236d9dfde1d46824c0b5e 840 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 93 142 4.6E-17 T 14-10-2018 IPR004176 Clp, N-terminal AMIS_77690 d72ad3b13ce236d9dfde1d46824c0b5e 840 Gene3D G3DSA:1.10.8.60 720 817 1.1E-26 T 14-10-2018 AMIS_77690 d72ad3b13ce236d9dfde1d46824c0b5e 840 Gene3D G3DSA:1.10.1780.10 1 148 2.6E-64 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AMIS_77690 d72ad3b13ce236d9dfde1d46824c0b5e 840 Pfam PF07724 AAA domain (Cdc48 subfamily) 541 713 2.2E-51 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMIS_77690 d72ad3b13ce236d9dfde1d46824c0b5e 840 SUPERFAMILY SSF81923 3 144 8.44E-33 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AMIS_77690 d72ad3b13ce236d9dfde1d46824c0b5e 840 SUPERFAMILY SSF52540 491 802 7.02E-78 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_77690 d72ad3b13ce236d9dfde1d46824c0b5e 840 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 720 800 8.3E-25 T 14-10-2018 IPR019489 Clp ATPase, C-terminal AMIS_77690 d72ad3b13ce236d9dfde1d46824c0b5e 840 Pfam PF02151 UvrB/uvrC motif 422 456 3.1E-7 T 14-10-2018 IPR001943 UVR domain GO:0005515 AMIS_77690 d72ad3b13ce236d9dfde1d46824c0b5e 840 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 300 312 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 AMIS_77690 d72ad3b13ce236d9dfde1d46824c0b5e 840 Gene3D G3DSA:3.40.50.300 157 348 1.5E-70 T 14-10-2018 AMIS_77690 d72ad3b13ce236d9dfde1d46824c0b5e 840 Gene3D G3DSA:3.40.50.300 349 469 3.8E-38 T 14-10-2018 AMIS_77690 d72ad3b13ce236d9dfde1d46824c0b5e 840 SUPERFAMILY SSF52540 168 487 1.47E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_77690 d72ad3b13ce236d9dfde1d46824c0b5e 840 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 546 564 9.4E-41 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 AMIS_77690 d72ad3b13ce236d9dfde1d46824c0b5e 840 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 620 638 9.4E-41 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 AMIS_77690 d72ad3b13ce236d9dfde1d46824c0b5e 840 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 591 609 9.4E-41 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 AMIS_77690 d72ad3b13ce236d9dfde1d46824c0b5e 840 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 653 667 9.4E-41 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 AMIS_77690 d72ad3b13ce236d9dfde1d46824c0b5e 840 SMART SM01086 720 809 1.1E-35 T 14-10-2018 IPR019489 Clp ATPase, C-terminal AMIS_77690 d72ad3b13ce236d9dfde1d46824c0b5e 840 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 210 326 3.6E-12 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMIS_77690 d72ad3b13ce236d9dfde1d46824c0b5e 840 Gene3D G3DSA:3.40.50.300 472 718 7.0E-95 T 14-10-2018 AMIS_60550 5ef9b0301bded4ca9cac9a3773860e64 266 Gene3D G3DSA:2.40.10.10 52 253 8.5E-74 T 14-10-2018 AMIS_60550 5ef9b0301bded4ca9cac9a3773860e64 266 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 206 218 3.3E-11 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AMIS_60550 5ef9b0301bded4ca9cac9a3773860e64 266 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 117 131 3.3E-11 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AMIS_60550 5ef9b0301bded4ca9cac9a3773860e64 266 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 62 77 3.3E-11 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AMIS_60550 5ef9b0301bded4ca9cac9a3773860e64 266 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 207 218 - T 14-10-2018 IPR033116 Serine proteases, trypsin family, serine active site AMIS_60550 5ef9b0301bded4ca9cac9a3773860e64 266 SMART SM00020 39 257 4.7E-64 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 AMIS_60550 5ef9b0301bded4ca9cac9a3773860e64 266 Gene3D G3DSA:2.40.10.10 46 251 8.5E-74 T 14-10-2018 AMIS_60550 5ef9b0301bded4ca9cac9a3773860e64 266 Pfam PF00089 Trypsin 40 257 7.7E-51 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 AMIS_60550 5ef9b0301bded4ca9cac9a3773860e64 266 SUPERFAMILY SSF50494 31 257 2.6E-60 T 14-10-2018 IPR009003 Peptidase S1, PA clan AMIS_60550 5ef9b0301bded4ca9cac9a3773860e64 266 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 72 77 - T 14-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 AMIS_14020 e6567d2bf9d826d75097bff6bc6ab24d 319 Gene3D G3DSA:3.40.50.300 7 251 1.2E-56 T 14-10-2018 AMIS_14020 e6567d2bf9d826d75097bff6bc6ab24d 319 SUPERFAMILY SSF52540 18 242 1.28E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_14020 e6567d2bf9d826d75097bff6bc6ab24d 319 SMART SM00382 39 224 1.4E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_14020 e6567d2bf9d826d75097bff6bc6ab24d 319 Pfam PF00005 ABC transporter 31 174 7.7E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_65760 d57009d955da27a3d9caba7fae6141e4 574 SUPERFAMILY SSF51445 9 494 1.61E-154 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_65760 d57009d955da27a3d9caba7fae6141e4 574 SMART SM00642 18 437 2.1E-160 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMIS_65760 d57009d955da27a3d9caba7fae6141e4 574 SUPERFAMILY SSF51011 498 571 5.28E-14 T 14-10-2018 AMIS_65760 d57009d955da27a3d9caba7fae6141e4 574 Gene3D G3DSA:3.90.400.10 110 186 1.2E-195 T 14-10-2018 AMIS_65760 d57009d955da27a3d9caba7fae6141e4 574 Pfam PF00128 Alpha amylase, catalytic domain 33 393 1.4E-115 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMIS_65760 d57009d955da27a3d9caba7fae6141e4 574 Gene3D G3DSA:3.20.20.80 10 489 1.2E-195 T 14-10-2018 AMIS_65760 d57009d955da27a3d9caba7fae6141e4 574 Gene3D G3DSA:2.60.40.1180 499 572 7.5E-16 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta AMIS_65760 d57009d955da27a3d9caba7fae6141e4 574 Pfam PF11941 Domain of unknown function (DUF3459) 481 570 1.1E-7 T 14-10-2018 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) AMIS_6240 cc02ace0ea63e12908b3bd3c72ed0fac 217 PRINTS PR00094 Adenylate kinase signature 177 191 1.1E-33 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AMIS_6240 cc02ace0ea63e12908b3bd3c72ed0fac 217 PRINTS PR00094 Adenylate kinase signature 81 97 1.1E-33 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AMIS_6240 cc02ace0ea63e12908b3bd3c72ed0fac 217 PRINTS PR00094 Adenylate kinase signature 4 17 1.1E-33 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AMIS_6240 cc02ace0ea63e12908b3bd3c72ed0fac 217 PRINTS PR00094 Adenylate kinase signature 32 46 1.1E-33 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AMIS_6240 cc02ace0ea63e12908b3bd3c72ed0fac 217 PRINTS PR00094 Adenylate kinase signature 160 175 1.1E-33 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AMIS_6240 cc02ace0ea63e12908b3bd3c72ed0fac 217 Pfam PF05191 Adenylate kinase, active site lid 127 162 4.3E-14 T 14-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 AMIS_6240 cc02ace0ea63e12908b3bd3c72ed0fac 217 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 14-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AMIS_6240 cc02ace0ea63e12908b3bd3c72ed0fac 217 TIGRFAM TIGR01351 adk: adenylate kinase 2 211 1.9E-75 T 14-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 AMIS_6240 cc02ace0ea63e12908b3bd3c72ed0fac 217 Hamap MF_00235 Adenylate kinase [adk]. 1 213 49.706 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AMIS_6240 cc02ace0ea63e12908b3bd3c72ed0fac 217 Pfam PF00406 Adenylate kinase 5 190 4.5E-55 T 14-10-2018 AMIS_6240 cc02ace0ea63e12908b3bd3c72ed0fac 217 Gene3D G3DSA:3.40.50.300 1 215 1.1E-75 T 14-10-2018 AMIS_6240 cc02ace0ea63e12908b3bd3c72ed0fac 217 SUPERFAMILY SSF52540 4 210 5.63E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_74270 a1037fb109ec235afe92bcf2d53a65ad 67 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 7 60 3.1E-20 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AMIS_74270 a1037fb109ec235afe92bcf2d53a65ad 67 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 7 67 13.789 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AMIS_74270 a1037fb109ec235afe92bcf2d53a65ad 67 Gene3D G3DSA:1.10.287.1040 2 67 1.3E-15 T 14-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 AMIS_74270 a1037fb109ec235afe92bcf2d53a65ad 67 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 3 47 1.0E-10 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AMIS_74270 a1037fb109ec235afe92bcf2d53a65ad 67 SUPERFAMILY SSF116842 4 59 2.48E-17 T 14-10-2018 AMIS_74270 a1037fb109ec235afe92bcf2d53a65ad 67 Pfam PF02609 Exonuclease VII small subunit 8 58 2.5E-17 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AMIS_74270 a1037fb109ec235afe92bcf2d53a65ad 67 PIRSF PIRSF006488 1 67 8.5E-22 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AMIS_74520 c0babb5b8b9bc766d9755b37260db70f 583 Gene3D G3DSA:2.40.50.100 509 583 2.8E-21 T 14-10-2018 AMIS_74520 c0babb5b8b9bc766d9755b37260db70f 583 SUPERFAMILY SSF56059 114 326 3.54E-62 T 14-10-2018 AMIS_74520 c0babb5b8b9bc766d9755b37260db70f 583 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 285 292 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMIS_74520 c0babb5b8b9bc766d9755b37260db70f 583 Pfam PF02785 Biotin carboxylase C-terminal domain 334 442 1.5E-36 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AMIS_74520 c0babb5b8b9bc766d9755b37260db70f 583 Pfam PF00289 Biotin carboxylase, N-terminal domain 2 109 2.9E-42 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AMIS_74520 c0babb5b8b9bc766d9755b37260db70f 583 Pfam PF00364 Biotin-requiring enzyme 517 582 1.0E-17 T 14-10-2018 IPR000089 Biotin/lipoyl attachment AMIS_74520 c0babb5b8b9bc766d9755b37260db70f 583 SUPERFAMILY SSF51246 328 446 2.35E-37 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AMIS_74520 c0babb5b8b9bc766d9755b37260db70f 583 SUPERFAMILY SSF52440 2 112 7.19E-45 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AMIS_74520 c0babb5b8b9bc766d9755b37260db70f 583 Gene3D G3DSA:3.30.470.130 1 447 3.4E-179 T 14-10-2018 AMIS_74520 c0babb5b8b9bc766d9755b37260db70f 583 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 114 321 2.6E-79 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMIS_74520 c0babb5b8b9bc766d9755b37260db70f 583 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 539 556 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AMIS_74520 c0babb5b8b9bc766d9755b37260db70f 583 SUPERFAMILY SSF51230 512 582 1.24E-19 T 14-10-2018 IPR011053 Single hybrid motif AMIS_74520 c0babb5b8b9bc766d9755b37260db70f 583 SMART SM00878 334 442 3.2E-56 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AMIS_1710 fd67a93da26372b4a2eaa71710faaa6f 450 Pfam PF00512 His Kinase A (phospho-acceptor) domain 226 294 5.7E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_1710 fd67a93da26372b4a2eaa71710faaa6f 450 Gene3D G3DSA:1.10.287.130 190 292 8.3E-23 T 14-10-2018 AMIS_1710 fd67a93da26372b4a2eaa71710faaa6f 450 Gene3D G3DSA:3.30.565.10 293 450 4.3E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_1710 fd67a93da26372b4a2eaa71710faaa6f 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 375 389 1.7E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_1710 fd67a93da26372b4a2eaa71710faaa6f 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 403 1.7E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_1710 fd67a93da26372b4a2eaa71710faaa6f 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 428 1.7E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_1710 fd67a93da26372b4a2eaa71710faaa6f 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 447 1.7E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_1710 fd67a93da26372b4a2eaa71710faaa6f 450 SUPERFAMILY SSF47384 209 295 9.42E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_1710 fd67a93da26372b4a2eaa71710faaa6f 450 SMART SM00387 339 450 3.6E-33 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_1710 fd67a93da26372b4a2eaa71710faaa6f 450 SUPERFAMILY SSF55874 283 448 6.16E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_1710 fd67a93da26372b4a2eaa71710faaa6f 450 SMART SM00388 226 294 3.0E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_1710 fd67a93da26372b4a2eaa71710faaa6f 450 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 340 449 3.0E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_48280 d6b8cedaaada6cfe2b32435918908e76 287 Pfam PF02096 60Kd inner membrane protein 35 247 3.6E-46 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AMIS_48280 d6b8cedaaada6cfe2b32435918908e76 287 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 34 247 2.5E-49 T 14-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_57880 1101a499c93eb6da7ed3a22b215f4650 735 SUPERFAMILY SSF55008 6 74 4.84E-20 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 AMIS_57880 1101a499c93eb6da7ed3a22b215f4650 735 Gene3D G3DSA:3.40.1110.10 441 558 4.4E-85 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AMIS_57880 1101a499c93eb6da7ed3a22b215f4650 735 Gene3D G3DSA:2.70.150.20 224 335 1.9E-35 T 14-10-2018 AMIS_57880 1101a499c93eb6da7ed3a22b215f4650 735 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 194 729 1.5E-153 T 14-10-2018 AMIS_57880 1101a499c93eb6da7ed3a22b215f4650 735 Pfam PF00702 haloacid dehalogenase-like hydrolase 427 640 1.3E-44 T 14-10-2018 AMIS_57880 1101a499c93eb6da7ed3a22b215f4650 735 SUPERFAMILY SSF56784 428 726 7.28E-57 T 14-10-2018 IPR036412 HAD-like superfamily AMIS_57880 1101a499c93eb6da7ed3a22b215f4650 735 SUPERFAMILY SSF81653 235 330 7.19E-25 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 AMIS_57880 1101a499c93eb6da7ed3a22b215f4650 735 Gene3D G3DSA:3.40.50.1000 411 678 4.4E-85 T 14-10-2018 IPR023214 HAD superfamily AMIS_57880 1101a499c93eb6da7ed3a22b215f4650 735 ProSitePatterns PS01047 Heavy-metal-associated domain. 13 41 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AMIS_57880 1101a499c93eb6da7ed3a22b215f4650 735 Gene3D G3DSA:3.30.70.100 5 80 5.3E-20 T 14-10-2018 AMIS_57880 1101a499c93eb6da7ed3a22b215f4650 735 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 657 682 4.9E-9 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AMIS_57880 1101a499c93eb6da7ed3a22b215f4650 735 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 598 614 4.9E-9 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AMIS_57880 1101a499c93eb6da7ed3a22b215f4650 735 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 626 642 4.9E-9 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AMIS_57880 1101a499c93eb6da7ed3a22b215f4650 735 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 205 707 3.6E-85 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AMIS_57880 1101a499c93eb6da7ed3a22b215f4650 735 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 280 294 2.5E-26 T 14-10-2018 AMIS_57880 1101a499c93eb6da7ed3a22b215f4650 735 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 430 444 2.5E-26 T 14-10-2018 AMIS_57880 1101a499c93eb6da7ed3a22b215f4650 735 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 649 661 2.5E-26 T 14-10-2018 AMIS_57880 1101a499c93eb6da7ed3a22b215f4650 735 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 551 562 2.5E-26 T 14-10-2018 AMIS_57880 1101a499c93eb6da7ed3a22b215f4650 735 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 626 645 2.5E-26 T 14-10-2018 AMIS_57880 1101a499c93eb6da7ed3a22b215f4650 735 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 573 583 2.5E-26 T 14-10-2018 AMIS_57880 1101a499c93eb6da7ed3a22b215f4650 735 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 149 728 9.3E-176 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AMIS_57880 1101a499c93eb6da7ed3a22b215f4650 735 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 432 438 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AMIS_57880 1101a499c93eb6da7ed3a22b215f4650 735 Pfam PF00122 E1-E2 ATPase 232 408 1.9E-53 T 14-10-2018 AMIS_57880 1101a499c93eb6da7ed3a22b215f4650 735 SUPERFAMILY SSF81665 199 701 1.23E-12 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 AMIS_57880 1101a499c93eb6da7ed3a22b215f4650 735 Pfam PF00403 Heavy-metal-associated domain 11 69 3.3E-16 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AMIS_47700 9e581f97a812ca7541a908823143f3af 379 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 378 9.6E-49 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMIS_47700 9e581f97a812ca7541a908823143f3af 379 SUPERFAMILY SSF47203 228 379 2.74E-57 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMIS_47700 9e581f97a812ca7541a908823143f3af 379 Gene3D G3DSA:2.40.110.10 122 234 2.8E-34 T 14-10-2018 AMIS_47700 9e581f97a812ca7541a908823143f3af 379 Gene3D G3DSA:1.10.540.10 2 121 3.7E-23 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMIS_47700 9e581f97a812ca7541a908823143f3af 379 SUPERFAMILY SSF56645 7 241 1.31E-62 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMIS_47700 9e581f97a812ca7541a908823143f3af 379 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 125 137 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AMIS_47700 9e581f97a812ca7541a908823143f3af 379 Gene3D G3DSA:1.20.140.10 235 379 3.0E-55 T 14-10-2018 AMIS_47700 9e581f97a812ca7541a908823143f3af 379 PIRSF PIRSF016578 2 379 5.0E-16 T 14-10-2018 AMIS_47700 9e581f97a812ca7541a908823143f3af 379 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 9 119 4.9E-19 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMIS_47700 9e581f97a812ca7541a908823143f3af 379 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 336 355 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AMIS_47700 9e581f97a812ca7541a908823143f3af 379 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 215 9.5E-22 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMIS_23410 6d07b340c0589ca58708db2bd05a2e65 190 Gene3D G3DSA:3.40.430.10 2 186 3.0E-39 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AMIS_23410 6d07b340c0589ca58708db2bd05a2e65 190 SUPERFAMILY SSF53597 2 187 1.83E-31 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AMIS_23410 6d07b340c0589ca58708db2bd05a2e65 190 Pfam PF01872 RibD C-terminal domain 2 182 2.2E-11 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 AMIS_16180 58d06e00ca8bcfd6cc379d866895529d 505 Gene3D G3DSA:3.30.360.10 196 504 9.3E-117 T 14-10-2018 AMIS_16180 58d06e00ca8bcfd6cc379d866895529d 505 Gene3D G3DSA:3.40.50.720 18 195 7.7E-49 T 14-10-2018 AMIS_16180 58d06e00ca8bcfd6cc379d866895529d 505 SUPERFAMILY SSF55347 197 503 3.6E-108 T 14-10-2018 AMIS_16180 58d06e00ca8bcfd6cc379d866895529d 505 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 197 203 - T 14-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMIS_16180 58d06e00ca8bcfd6cc379d866895529d 505 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 19 504 81.948 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMIS_16180 58d06e00ca8bcfd6cc379d866895529d 505 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 23 207 1.9E-56 T 14-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMIS_16180 58d06e00ca8bcfd6cc379d866895529d 505 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 19 504 4.6E-188 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMIS_16180 58d06e00ca8bcfd6cc379d866895529d 505 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 209 503 1.0E-109 T 14-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMIS_16180 58d06e00ca8bcfd6cc379d866895529d 505 PIRSF PIRSF000110 5 505 2.8E-169 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMIS_16180 58d06e00ca8bcfd6cc379d866895529d 505 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 239 256 9.0E-45 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMIS_16180 58d06e00ca8bcfd6cc379d866895529d 505 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 163 176 9.0E-45 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMIS_16180 58d06e00ca8bcfd6cc379d866895529d 505 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 187 215 9.0E-45 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMIS_16180 58d06e00ca8bcfd6cc379d866895529d 505 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 346 372 9.0E-45 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMIS_16180 58d06e00ca8bcfd6cc379d866895529d 505 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 257 273 9.0E-45 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMIS_16180 58d06e00ca8bcfd6cc379d866895529d 505 SUPERFAMILY SSF51735 8 210 3.15E-58 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_17630 aadf2bbf3a770287d10222199a8c3018 705 Pfam PF08448 PAS fold 343 458 3.0E-8 T 14-10-2018 IPR013656 PAS fold-4 AMIS_17630 aadf2bbf3a770287d10222199a8c3018 705 SUPERFAMILY SSF47384 447 534 7.06E-12 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_17630 aadf2bbf3a770287d10222199a8c3018 705 Gene3D G3DSA:1.10.287.130 460 535 1.0E-10 T 14-10-2018 AMIS_17630 aadf2bbf3a770287d10222199a8c3018 705 Gene3D G3DSA:3.30.450.20 324 459 8.8E-17 T 14-10-2018 AMIS_17630 aadf2bbf3a770287d10222199a8c3018 705 SUPERFAMILY SSF55874 529 692 1.83E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_17630 aadf2bbf3a770287d10222199a8c3018 705 SMART SM01079 60 243 5.5E-5 T 14-10-2018 IPR006189 CHASE domain AMIS_17630 aadf2bbf3a770287d10222199a8c3018 705 Pfam PF00512 His Kinase A (phospho-acceptor) domain 464 533 9.2E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_17630 aadf2bbf3a770287d10222199a8c3018 705 Pfam PF03924 CHASE domain 68 227 3.0E-18 T 14-10-2018 IPR006189 CHASE domain AMIS_17630 aadf2bbf3a770287d10222199a8c3018 705 SMART SM00387 581 694 3.2E-37 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_17630 aadf2bbf3a770287d10222199a8c3018 705 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 582 692 6.4E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_17630 aadf2bbf3a770287d10222199a8c3018 705 SUPERFAMILY SSF55785 324 455 1.2E-13 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_17630 aadf2bbf3a770287d10222199a8c3018 705 SMART SM00388 463 538 1.9E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_17630 aadf2bbf3a770287d10222199a8c3018 705 Gene3D G3DSA:3.30.565.10 541 699 1.4E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_17630 aadf2bbf3a770287d10222199a8c3018 705 PRINTS PR00344 Bacterial sensor protein C-terminal signature 678 691 8.3E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_17630 aadf2bbf3a770287d10222199a8c3018 705 PRINTS PR00344 Bacterial sensor protein C-terminal signature 654 672 8.3E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_17630 aadf2bbf3a770287d10222199a8c3018 705 PRINTS PR00344 Bacterial sensor protein C-terminal signature 621 635 8.3E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_17630 aadf2bbf3a770287d10222199a8c3018 705 PRINTS PR00344 Bacterial sensor protein C-terminal signature 639 649 8.3E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_8690 95564ffee1a6ca90388354a26b9d9cf4 393 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 7 388 6.9E-64 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AMIS_8690 95564ffee1a6ca90388354a26b9d9cf4 393 PRINTS PR00714 Phosphomannose isomerase type I signature 123 146 1.7E-59 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AMIS_8690 95564ffee1a6ca90388354a26b9d9cf4 393 PRINTS PR00714 Phosphomannose isomerase type I signature 33 48 1.7E-59 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AMIS_8690 95564ffee1a6ca90388354a26b9d9cf4 393 PRINTS PR00714 Phosphomannose isomerase type I signature 220 235 1.7E-59 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AMIS_8690 95564ffee1a6ca90388354a26b9d9cf4 393 PRINTS PR00714 Phosphomannose isomerase type I signature 255 274 1.7E-59 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AMIS_8690 95564ffee1a6ca90388354a26b9d9cf4 393 PRINTS PR00714 Phosphomannose isomerase type I signature 274 293 1.7E-59 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AMIS_8690 95564ffee1a6ca90388354a26b9d9cf4 393 PRINTS PR00714 Phosphomannose isomerase type I signature 6 24 1.7E-59 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AMIS_8690 95564ffee1a6ca90388354a26b9d9cf4 393 PRINTS PR00714 Phosphomannose isomerase type I signature 82 103 1.7E-59 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AMIS_8690 95564ffee1a6ca90388354a26b9d9cf4 393 PRINTS PR00714 Phosphomannose isomerase type I signature 236 255 1.7E-59 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AMIS_8690 95564ffee1a6ca90388354a26b9d9cf4 393 PIRSF PIRSF001480 1 392 1.8E-87 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AMIS_8690 95564ffee1a6ca90388354a26b9d9cf4 393 SUPERFAMILY SSF51182 3 375 5.35E-85 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily AMIS_8690 95564ffee1a6ca90388354a26b9d9cf4 393 Gene3D G3DSA:2.60.120.10 301 383 1.3E-115 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMIS_8690 95564ffee1a6ca90388354a26b9d9cf4 393 Gene3D G3DSA:2.60.120.10 8 275 1.3E-115 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMIS_8690 95564ffee1a6ca90388354a26b9d9cf4 393 Gene3D G3DSA:1.10.441.10 147 300 1.3E-115 T 14-10-2018 AMIS_8690 95564ffee1a6ca90388354a26b9d9cf4 393 Pfam PF01238 Phosphomannose isomerase type I 4 353 1.9E-59 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AMIS_43780 171867f0cdd8ac3e17506774256418d2 1286 Gene3D G3DSA:1.25.40.10 870 1076 2.8E-47 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_43780 171867f0cdd8ac3e17506774256418d2 1286 Pfam PF13374 Tetratricopeptide repeat 964 993 2.5E-4 T 14-10-2018 AMIS_43780 171867f0cdd8ac3e17506774256418d2 1286 SUPERFAMILY SSF48452 1038 1250 1.4E-35 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_43780 171867f0cdd8ac3e17506774256418d2 1286 Pfam PF13424 Tetratricopeptide repeat 1084 1154 5.8E-14 T 14-10-2018 AMIS_43780 171867f0cdd8ac3e17506774256418d2 1286 Pfam PF13424 Tetratricopeptide repeat 1163 1233 1.3E-9 T 14-10-2018 AMIS_43780 171867f0cdd8ac3e17506774256418d2 1286 Pfam PF13424 Tetratricopeptide repeat 1004 1074 4.3E-15 T 14-10-2018 AMIS_43780 171867f0cdd8ac3e17506774256418d2 1286 Pfam PF13424 Tetratricopeptide repeat 883 953 1.3E-12 T 14-10-2018 AMIS_43780 171867f0cdd8ac3e17506774256418d2 1286 SMART SM00028 1084 1117 0.01 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_43780 171867f0cdd8ac3e17506774256418d2 1286 SMART SM00028 964 997 0.0034 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_43780 171867f0cdd8ac3e17506774256418d2 1286 SMART SM00028 1004 1037 0.0035 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_43780 171867f0cdd8ac3e17506774256418d2 1286 SMART SM00028 924 957 0.004 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_43780 171867f0cdd8ac3e17506774256418d2 1286 SMART SM00028 1204 1237 100.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_43780 171867f0cdd8ac3e17506774256418d2 1286 SMART SM00028 1124 1157 0.061 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_43780 171867f0cdd8ac3e17506774256418d2 1286 SMART SM00028 1044 1077 0.01 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_43780 171867f0cdd8ac3e17506774256418d2 1286 SMART SM00028 884 917 4.5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_43780 171867f0cdd8ac3e17506774256418d2 1286 SMART SM00028 1164 1197 0.014 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_43780 171867f0cdd8ac3e17506774256418d2 1286 SUPERFAMILY SSF52540 413 704 1.38E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_43780 171867f0cdd8ac3e17506774256418d2 1286 Gene3D G3DSA:1.25.40.10 1082 1243 1.4E-37 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_43780 171867f0cdd8ac3e17506774256418d2 1286 Gene3D G3DSA:3.40.50.300 415 588 6.5E-11 T 14-10-2018 AMIS_43780 171867f0cdd8ac3e17506774256418d2 1286 Pfam PF05729 NACHT domain 454 616 6.5E-7 T 14-10-2018 IPR007111 NACHT nucleoside triphosphatase AMIS_43780 171867f0cdd8ac3e17506774256418d2 1286 SUPERFAMILY SSF48452 880 1054 2.28E-32 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_43780 171867f0cdd8ac3e17506774256418d2 1286 PRINTS PR00364 Disease resistance protein signature 531 545 3.9E-6 T 14-10-2018 AMIS_43780 171867f0cdd8ac3e17506774256418d2 1286 PRINTS PR00364 Disease resistance protein signature 453 468 3.9E-6 T 14-10-2018 AMIS_43780 171867f0cdd8ac3e17506774256418d2 1286 PRINTS PR00364 Disease resistance protein signature 644 658 3.9E-6 T 14-10-2018 AMIS_43780 171867f0cdd8ac3e17506774256418d2 1286 Pfam PF12770 CHAT domain 212 380 2.4E-17 T 14-10-2018 IPR024983 CHAT domain AMIS_76740 c1a05e06c76246f6a66ae6060abad8a6 249 SUPERFAMILY SSF56752 8 247 3.14E-49 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 AMIS_76740 c1a05e06c76246f6a66ae6060abad8a6 249 Pfam PF01063 Amino-transferase class IV 16 228 2.3E-39 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 AMIS_76740 c1a05e06c76246f6a66ae6060abad8a6 249 Gene3D G3DSA:3.30.470.10 5 84 3.5E-13 T 14-10-2018 AMIS_76740 c1a05e06c76246f6a66ae6060abad8a6 249 Gene3D G3DSA:3.20.10.10 90 245 1.3E-41 T 14-10-2018 AMIS_72060 5be4e7f4d88c0485807663effa43763f 291 Gene3D G3DSA:3.40.50.150 98 291 1.5E-47 T 14-10-2018 AMIS_72060 5be4e7f4d88c0485807663effa43763f 291 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 195 201 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AMIS_72060 5be4e7f4d88c0485807663effa43763f 291 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 17 290 37.757 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 AMIS_72060 5be4e7f4d88c0485807663effa43763f 291 Pfam PF05175 Methyltransferase small domain 123 202 9.1E-10 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 AMIS_72060 5be4e7f4d88c0485807663effa43763f 291 Gene3D G3DSA:1.10.8.10 19 97 9.9E-18 T 14-10-2018 AMIS_72060 5be4e7f4d88c0485807663effa43763f 291 SUPERFAMILY SSF53335 21 287 5.63E-45 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_72060 5be4e7f4d88c0485807663effa43763f 291 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 39 286 2.9E-65 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 AMIS_72060 5be4e7f4d88c0485807663effa43763f 291 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 29 289 2.8E-44 T 14-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 AMIS_59770 c51f8cb4d75b35fbd47fc7092766ad6a 293 Pfam PF00106 short chain dehydrogenase 18 200 1.5E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_59770 c51f8cb4d75b35fbd47fc7092766ad6a 293 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 18 35 2.5E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_59770 c51f8cb4d75b35fbd47fc7092766ad6a 293 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.5E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_59770 c51f8cb4d75b35fbd47fc7092766ad6a 293 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 2.5E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_59770 c51f8cb4d75b35fbd47fc7092766ad6a 293 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 2.5E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_59770 c51f8cb4d75b35fbd47fc7092766ad6a 293 SUPERFAMILY SSF51735 12 254 2.18E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_59770 c51f8cb4d75b35fbd47fc7092766ad6a 293 Gene3D G3DSA:3.40.50.720 2 289 2.3E-67 T 14-10-2018 AMIS_62060 b8ef741edef25c53684798897a67f87b 396 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 394 3.3E-168 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AMIS_62060 b8ef741edef25c53684798897a67f87b 396 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 395 55.887 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AMIS_62060 b8ef741edef25c53684798897a67f87b 396 Pfam PF02772 S-adenosylmethionine synthetase, central domain 124 243 3.5E-44 T 14-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AMIS_62060 b8ef741edef25c53684798897a67f87b 396 PIRSF PIRSF000497 1 396 4.4E-164 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AMIS_62060 b8ef741edef25c53684798897a67f87b 396 SUPERFAMILY SSF55973 245 394 3.73E-66 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AMIS_62060 b8ef741edef25c53684798897a67f87b 396 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 271 279 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AMIS_62060 b8ef741edef25c53684798897a67f87b 396 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 245 383 1.8E-67 T 14-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AMIS_62060 b8ef741edef25c53684798897a67f87b 396 Gene3D G3DSA:3.30.300.10 11 282 9.2E-168 T 14-10-2018 AMIS_62060 b8ef741edef25c53684798897a67f87b 396 SUPERFAMILY SSF55973 122 243 1.29E-43 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AMIS_62060 b8ef741edef25c53684798897a67f87b 396 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 1.8E-40 T 14-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AMIS_62060 b8ef741edef25c53684798897a67f87b 396 Gene3D G3DSA:3.30.300.10 5 245 9.2E-168 T 14-10-2018 AMIS_62060 b8ef741edef25c53684798897a67f87b 396 SUPERFAMILY SSF55973 3 109 2.63E-45 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AMIS_62060 b8ef741edef25c53684798897a67f87b 396 Gene3D G3DSA:3.30.300.10 102 386 9.2E-168 T 14-10-2018 AMIS_62060 b8ef741edef25c53684798897a67f87b 396 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 126 136 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AMIS_27500 6be50c697432c62d158027403cdae865 160 SMART SM00347 29 129 1.1E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_27500 6be50c697432c62d158027403cdae865 160 Pfam PF12802 MarR family 35 93 1.1E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_27500 6be50c697432c62d158027403cdae865 160 SUPERFAMILY SSF46785 10 141 2.51E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_27500 6be50c697432c62d158027403cdae865 160 Gene3D G3DSA:1.10.10.10 3 149 2.4E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_56370 1c1c6994b410fa2e90731e2ef466f2c0 309 SUPERFAMILY SSF51735 90 280 2.29E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_56370 1c1c6994b410fa2e90731e2ef466f2c0 309 Gene3D G3DSA:3.40.50.720 28 305 1.7E-73 T 14-10-2018 AMIS_56370 1c1c6994b410fa2e90731e2ef466f2c0 309 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 96 279 1.6E-39 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AMIS_56370 1c1c6994b410fa2e90731e2ef466f2c0 309 SUPERFAMILY SSF52283 26 111 2.64E-8 T 14-10-2018 AMIS_56370 1c1c6994b410fa2e90731e2ef466f2c0 309 Gene3D G3DSA:3.40.50.720 89 282 1.7E-73 T 14-10-2018 AMIS_51260 c7a43dcac12dd22761af001e759bc301 455 Gene3D G3DSA:3.40.190.10 89 401 7.3E-44 T 14-10-2018 AMIS_51260 c7a43dcac12dd22761af001e759bc301 455 SUPERFAMILY SSF53850 59 453 2.17E-38 T 14-10-2018 AMIS_51260 c7a43dcac12dd22761af001e759bc301 455 Gene3D G3DSA:3.40.190.10 173 433 7.3E-44 T 14-10-2018 AMIS_24680 49896bf69191704d9a5d0bac78ef94c4 886 SUPERFAMILY SSF52540 3 210 7.25E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_24680 49896bf69191704d9a5d0bac78ef94c4 886 ProSitePatterns PS00622 LuxR-type HTH domain signature. 846 873 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_24680 49896bf69191704d9a5d0bac78ef94c4 886 SUPERFAMILY SSF46894 823 882 1.36E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_24680 49896bf69191704d9a5d0bac78ef94c4 886 SMART SM00421 829 886 2.1E-22 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_24680 49896bf69191704d9a5d0bac78ef94c4 886 Pfam PF00196 Bacterial regulatory proteins, luxR family 831 882 5.3E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_24680 49896bf69191704d9a5d0bac78ef94c4 886 Pfam PF13191 AAA ATPase domain 5 148 2.5E-11 T 14-10-2018 AMIS_24680 49896bf69191704d9a5d0bac78ef94c4 886 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 846 862 3.3E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_24680 49896bf69191704d9a5d0bac78ef94c4 886 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 832 846 3.3E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_24680 49896bf69191704d9a5d0bac78ef94c4 886 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 862 874 3.3E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_24680 49896bf69191704d9a5d0bac78ef94c4 886 Gene3D G3DSA:1.10.10.10 806 886 1.3E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_6890 dacaa2c3845bb48df88b552597cbed87 282 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 235 251 4.1E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_6890 dacaa2c3845bb48df88b552597cbed87 282 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 221 235 4.1E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_6890 dacaa2c3845bb48df88b552597cbed87 282 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 251 263 4.1E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_6890 dacaa2c3845bb48df88b552597cbed87 282 Pfam PF00196 Bacterial regulatory proteins, luxR family 220 272 3.9E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_6890 dacaa2c3845bb48df88b552597cbed87 282 ProSitePatterns PS00622 LuxR-type HTH domain signature. 235 262 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_6890 dacaa2c3845bb48df88b552597cbed87 282 SUPERFAMILY SSF52172 3 102 5.18E-5 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_6890 dacaa2c3845bb48df88b552597cbed87 282 SMART SM00421 218 275 8.0E-25 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_6890 dacaa2c3845bb48df88b552597cbed87 282 SUPERFAMILY SSF46894 214 281 1.53E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_6890 dacaa2c3845bb48df88b552597cbed87 282 Gene3D G3DSA:1.10.10.10 181 282 3.8E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_6890 dacaa2c3845bb48df88b552597cbed87 282 Gene3D G3DSA:3.40.50.2300 2 114 6.6E-6 T 14-10-2018 AMIS_29110 85a57d922b01ef83a959448c268b152a 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 195 5.8E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_29110 85a57d922b01ef83a959448c268b152a 214 Gene3D G3DSA:3.40.50.12740 1 212 1.3E-39 T 14-10-2018 AMIS_29110 85a57d922b01ef83a959448c268b152a 214 SUPERFAMILY SSF52172 1 172 1.63E-15 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_29110 85a57d922b01ef83a959448c268b152a 214 SMART SM00421 148 210 2.4E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_29110 85a57d922b01ef83a959448c268b152a 214 SMART SM00448 1 120 3.1E-6 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_29110 85a57d922b01ef83a959448c268b152a 214 Pfam PF00072 Response regulator receiver domain 3 108 5.8E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_29110 85a57d922b01ef83a959448c268b152a 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 9.9E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_29110 85a57d922b01ef83a959448c268b152a 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 9.9E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_29110 85a57d922b01ef83a959448c268b152a 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 9.9E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_78200 0bb5f23451d2d948236d1dd460d39a8f 668 SMART SM00878 320 435 2.5E-38 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AMIS_78200 0bb5f23451d2d948236d1dd460d39a8f 668 SUPERFAMILY SSF51230 594 665 1.7E-17 T 14-10-2018 IPR011053 Single hybrid motif AMIS_78200 0bb5f23451d2d948236d1dd460d39a8f 668 SUPERFAMILY SSF51246 315 441 1.62E-32 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AMIS_78200 0bb5f23451d2d948236d1dd460d39a8f 668 Pfam PF00364 Biotin-requiring enzyme 605 665 1.1E-13 T 14-10-2018 IPR000089 Biotin/lipoyl attachment AMIS_78200 0bb5f23451d2d948236d1dd460d39a8f 668 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 143 157 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMIS_78200 0bb5f23451d2d948236d1dd460d39a8f 668 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 622 639 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AMIS_78200 0bb5f23451d2d948236d1dd460d39a8f 668 SUPERFAMILY SSF56059 110 317 9.37E-50 T 14-10-2018 AMIS_78200 0bb5f23451d2d948236d1dd460d39a8f 668 Pfam PF02785 Biotin carboxylase C-terminal domain 320 436 2.5E-27 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AMIS_78200 0bb5f23451d2d948236d1dd460d39a8f 668 Gene3D G3DSA:3.30.470.130 1 443 5.3E-149 T 14-10-2018 AMIS_78200 0bb5f23451d2d948236d1dd460d39a8f 668 SUPERFAMILY SSF52440 2 113 7.91E-37 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AMIS_78200 0bb5f23451d2d948236d1dd460d39a8f 668 Gene3D G3DSA:2.40.50.100 592 666 5.1E-19 T 14-10-2018 AMIS_78200 0bb5f23451d2d948236d1dd460d39a8f 668 Pfam PF00289 Biotin carboxylase, N-terminal domain 2 109 1.3E-33 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AMIS_78200 0bb5f23451d2d948236d1dd460d39a8f 668 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 141 307 5.4E-49 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMIS_49380 43a9bb1b56700062f29fa40ce680f439 327 SMART SM00458 208 327 3.8E-16 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_49380 43a9bb1b56700062f29fa40ce680f439 327 Pfam PF00652 Ricin-type beta-trefoil lectin domain 209 324 1.9E-18 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_49380 43a9bb1b56700062f29fa40ce680f439 327 SUPERFAMILY SSF50370 210 326 3.37E-26 T 14-10-2018 IPR035992 Ricin B-like lectins AMIS_49380 43a9bb1b56700062f29fa40ce680f439 327 Gene3D G3DSA:2.80.10.50 202 327 1.7E-26 T 14-10-2018 AMIS_10400 baabbc76b0fc18cf519508d39a6bb67e 369 Pfam PF13692 Glycosyl transferases group 1 197 329 4.1E-22 T 14-10-2018 AMIS_10400 baabbc76b0fc18cf519508d39a6bb67e 369 Pfam PF13439 Glycosyltransferase Family 4 15 180 3.2E-18 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AMIS_10400 baabbc76b0fc18cf519508d39a6bb67e 369 Gene3D G3DSA:3.40.50.2000 1 194 1.6E-19 T 14-10-2018 AMIS_10400 baabbc76b0fc18cf519508d39a6bb67e 369 SUPERFAMILY SSF53756 1 357 6.28E-61 T 14-10-2018 AMIS_10400 baabbc76b0fc18cf519508d39a6bb67e 369 Gene3D G3DSA:3.40.50.2000 195 346 7.1E-28 T 14-10-2018 AMIS_25010 5d793405ccc13df48983beb9c3a1697d 470 Pfam PF07690 Major Facilitator Superfamily 15 395 7.0E-56 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_25010 5d793405ccc13df48983beb9c3a1697d 470 ProSitePatterns PS00216 Sugar transport proteins signature 1. 63 79 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AMIS_25010 5d793405ccc13df48983beb9c3a1697d 470 Gene3D G3DSA:1.20.1250.20 245 452 4.3E-19 T 14-10-2018 AMIS_25010 5d793405ccc13df48983beb9c3a1697d 470 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 11 403 1.0E-68 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 AMIS_25010 5d793405ccc13df48983beb9c3a1697d 470 SUPERFAMILY SSF103473 1 445 1.01E-70 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_25010 5d793405ccc13df48983beb9c3a1697d 470 PRINTS PR01035 Tetracycline resistance protein signature 135 157 8.7E-7 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMIS_25010 5d793405ccc13df48983beb9c3a1697d 470 PRINTS PR01035 Tetracycline resistance protein signature 22 38 8.7E-7 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMIS_25010 5d793405ccc13df48983beb9c3a1697d 470 PRINTS PR01035 Tetracycline resistance protein signature 52 71 8.7E-7 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMIS_25010 5d793405ccc13df48983beb9c3a1697d 470 Gene3D G3DSA:1.20.1720.10 9 241 3.3E-55 T 14-10-2018 AMIS_43600 b4dabcbf397f541bf4e4f52f4a29fa3e 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 2.7E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_43600 b4dabcbf397f541bf4e4f52f4a29fa3e 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 2.7E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_43600 b4dabcbf397f541bf4e4f52f4a29fa3e 188 Gene3D G3DSA:1.10.357.10 2 188 1.1E-42 T 14-10-2018 AMIS_43600 b4dabcbf397f541bf4e4f52f4a29fa3e 188 SUPERFAMILY SSF48498 82 188 1.47E-8 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_43600 b4dabcbf397f541bf4e4f52f4a29fa3e 188 SUPERFAMILY SSF46689 4 82 1.7E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_43600 b4dabcbf397f541bf4e4f52f4a29fa3e 188 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 62 5.6E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_54230 ba46ee39428a384c0105296624aa0eba 243 Gene3D G3DSA:3.30.565.10 122 242 1.3E-20 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_54230 ba46ee39428a384c0105296624aa0eba 243 SUPERFAMILY SSF55874 151 234 2.73E-6 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_54230 ba46ee39428a384c0105296624aa0eba 243 Gene3D G3DSA:3.30.750.24 2 118 1.5E-9 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_54230 ba46ee39428a384c0105296624aa0eba 243 SUPERFAMILY SSF52091 6 112 1.65E-7 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_54230 ba46ee39428a384c0105296624aa0eba 243 Pfam PF13581 Histidine kinase-like ATPase domain 132 236 2.6E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_52410 badd9f08129839ed9ea38b5f49c87f54 494 Gene3D G3DSA:3.40.50.150 70 270 6.8E-53 T 14-10-2018 AMIS_52410 badd9f08129839ed9ea38b5f49c87f54 494 Gene3D G3DSA:1.25.40.10 353 468 1.5E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_52410 badd9f08129839ed9ea38b5f49c87f54 494 Pfam PF01739 CheR methyltransferase, SAM binding domain 72 258 4.8E-45 T 14-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal AMIS_52410 badd9f08129839ed9ea38b5f49c87f54 494 PRINTS PR00996 Glutamate methyltransferase family signature 138 154 1.5E-24 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMIS_52410 badd9f08129839ed9ea38b5f49c87f54 494 PRINTS PR00996 Glutamate methyltransferase family signature 208 222 1.5E-24 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMIS_52410 badd9f08129839ed9ea38b5f49c87f54 494 PRINTS PR00996 Glutamate methyltransferase family signature 104 124 1.5E-24 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMIS_52410 badd9f08129839ed9ea38b5f49c87f54 494 PRINTS PR00996 Glutamate methyltransferase family signature 64 76 1.5E-24 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMIS_52410 badd9f08129839ed9ea38b5f49c87f54 494 PRINTS PR00996 Glutamate methyltransferase family signature 227 250 1.5E-24 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMIS_52410 badd9f08129839ed9ea38b5f49c87f54 494 SUPERFAMILY SSF48452 360 456 1.38E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_52410 badd9f08129839ed9ea38b5f49c87f54 494 SMART SM00138 4 269 3.5E-51 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMIS_52410 badd9f08129839ed9ea38b5f49c87f54 494 SUPERFAMILY SSF53335 72 259 8.77E-45 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_61290 a8b4be0be1ca430abfdace7be53c3940 649 SUPERFAMILY SSF52540 222 600 4.01E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_61290 a8b4be0be1ca430abfdace7be53c3940 649 Gene3D G3DSA:3.40.50.300 505 645 4.8E-7 T 14-10-2018 AMIS_80100 8d51f150ac682be2fa027bcc76540029 301 Gene3D G3DSA:1.20.1540.10 67 278 4.6E-35 T 14-10-2018 IPR035952 Rhomboid-like superfamily AMIS_80100 8d51f150ac682be2fa027bcc76540029 301 SUPERFAMILY SSF144091 71 270 5.75E-36 T 14-10-2018 AMIS_80100 8d51f150ac682be2fa027bcc76540029 301 Pfam PF01694 Rhomboid family 133 265 1.6E-30 T 14-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AMIS_46630 4361b4ff4bc4f948bf10ddb6a38bc04c 610 Gene3D G3DSA:1.25.40.880 352 491 4.4E-62 T 14-10-2018 IPR038536 Alkyl/aryl-sulfatase, dimerisation domain superfamily AMIS_46630 4361b4ff4bc4f948bf10ddb6a38bc04c 610 Pfam PF14863 Alkyl sulfatase dimerisation 353 491 1.9E-62 T 14-10-2018 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 AMIS_46630 4361b4ff4bc4f948bf10ddb6a38bc04c 610 Gene3D G3DSA:3.30.1050.10 495 610 7.5E-30 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily AMIS_46630 4361b4ff4bc4f948bf10ddb6a38bc04c 610 Pfam PF00753 Metallo-beta-lactamase superfamily 93 316 1.2E-32 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMIS_46630 4361b4ff4bc4f948bf10ddb6a38bc04c 610 SUPERFAMILY SSF56281 1 493 2.8E-147 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMIS_46630 4361b4ff4bc4f948bf10ddb6a38bc04c 610 Gene3D G3DSA:3.60.15.30 1 351 1.4E-149 T 14-10-2018 AMIS_46630 4361b4ff4bc4f948bf10ddb6a38bc04c 610 SUPERFAMILY SSF55718 500 610 2.51E-19 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily AMIS_46630 4361b4ff4bc4f948bf10ddb6a38bc04c 610 Pfam PF14864 Alkyl sulfatase C-terminal 499 610 3.5E-29 T 14-10-2018 IPR029229 Alkyl sulfatase, C-terminal AMIS_46630 4361b4ff4bc4f948bf10ddb6a38bc04c 610 SMART SM00849 96 316 4.3E-21 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMIS_22010 8117c2dd0846f796359f9ce01d878879 181 SUPERFAMILY SSF46785 3 179 1.19E-40 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_22010 8117c2dd0846f796359f9ce01d878879 181 Gene3D G3DSA:1.10.10.10 1 89 1.2E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_22010 8117c2dd0846f796359f9ce01d878879 181 Pfam PF03551 Transcriptional regulator PadR-like family 7 79 1.6E-13 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal AMIS_22010 8117c2dd0846f796359f9ce01d878879 181 Pfam PF10400 Virulence activator alpha C-term 92 179 6.4E-21 T 14-10-2018 IPR018309 Transcription regulator PadR, C-terminal AMIS_50640 6359e713d13dee3797fa3c9c8e9f3ab0 421 Gene3D G3DSA:3.40.47.10 1 263 2.0E-75 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_50640 6359e713d13dee3797fa3c9c8e9f3ab0 421 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 160 176 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site AMIS_50640 6359e713d13dee3797fa3c9c8e9f3ab0 421 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 260 374 1.6E-34 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal AMIS_50640 6359e713d13dee3797fa3c9c8e9f3ab0 421 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3 252 1.6E-52 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AMIS_50640 6359e713d13dee3797fa3c9c8e9f3ab0 421 SUPERFAMILY SSF53901 3 416 4.07E-67 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_50640 6359e713d13dee3797fa3c9c8e9f3ab0 421 SMART SM00825 Beta-ketoacyl synthase 5 408 2.6E-12 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMIS_50640 6359e713d13dee3797fa3c9c8e9f3ab0 421 Gene3D G3DSA:3.40.47.10 264 419 1.7E-49 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_60970 44feda0ea7c1aa62ad1faeb50a41416a 295 Gene3D G3DSA:2.60.200.30 126 262 1.5E-86 T 14-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 AMIS_60970 44feda0ea7c1aa62ad1faeb50a41416a 295 Pfam PF01513 ATP-NAD kinase 58 270 1.2E-58 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 AMIS_60970 44feda0ea7c1aa62ad1faeb50a41416a 295 Hamap MF_00361 NAD kinase [nadK]. 3 285 28.784 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 AMIS_60970 44feda0ea7c1aa62ad1faeb50a41416a 295 SUPERFAMILY SSF111331 5 291 1.7E-75 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily AMIS_60970 44feda0ea7c1aa62ad1faeb50a41416a 295 Gene3D G3DSA:3.40.50.10330 58 283 1.5E-86 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 AMIS_35280 15145fdc2cf0395dd1ec2e5f2da8c2e5 123 SUPERFAMILY SSF54909 1 118 2.17E-27 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel AMIS_35280 15145fdc2cf0395dd1ec2e5f2da8c2e5 123 Pfam PF03795 YCII-related domain 1 118 5.6E-21 T 14-10-2018 IPR005545 YCII-related AMIS_35280 15145fdc2cf0395dd1ec2e5f2da8c2e5 123 Gene3D G3DSA:3.30.70.1060 1 120 2.4E-37 T 14-10-2018 AMIS_29090 e4950e0bcc13bf56a4faf8a9fc63e47c 532 Gene3D G3DSA:2.60.40.650 428 532 9.0E-28 T 14-10-2018 AMIS_29090 e4950e0bcc13bf56a4faf8a9fc63e47c 532 SUPERFAMILY SSF81296 423 531 1.26E-26 T 14-10-2018 IPR014756 Immunoglobulin E-set AMIS_29090 e4950e0bcc13bf56a4faf8a9fc63e47c 532 Gene3D G3DSA:3.90.420.10 209 427 1.6E-49 T 14-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 AMIS_29090 e4950e0bcc13bf56a4faf8a9fc63e47c 532 SUPERFAMILY SSF56524 240 428 7.32E-54 T 14-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 AMIS_29090 e4950e0bcc13bf56a4faf8a9fc63e47c 532 Pfam PF03404 Mo-co oxidoreductase dimerisation domain 436 517 8.1E-5 T 14-10-2018 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 Reactome: R-HSA-1614517 AMIS_29090 e4950e0bcc13bf56a4faf8a9fc63e47c 532 Pfam PF00174 Oxidoreductase molybdopterin binding domain 258 406 1.3E-37 T 14-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 AMIS_12240 33bf241a49dfd20ca2fa3cf6538291c4 620 Gene3D G3DSA:3.90.980.10 117 249 2.9E-37 T 14-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily AMIS_12240 33bf241a49dfd20ca2fa3cf6538291c4 620 SUPERFAMILY SSF56731 123 435 4.45E-93 T 14-10-2018 AMIS_12240 33bf241a49dfd20ca2fa3cf6538291c4 620 Pfam PF08275 DNA primase catalytic core, N-terminal domain 133 261 1.2E-38 T 14-10-2018 IPR013264 DNA primase, catalytic core, N-terminal AMIS_12240 33bf241a49dfd20ca2fa3cf6538291c4 620 Gene3D G3DSA:3.40.1360.10 250 380 2.7E-34 T 14-10-2018 AMIS_12240 33bf241a49dfd20ca2fa3cf6538291c4 620 Pfam PF08278 DNA primase DnaG DnaB-binding 471 598 2.2E-25 T 14-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 AMIS_12240 33bf241a49dfd20ca2fa3cf6538291c4 620 Pfam PF10410 DnaB-helicase binding domain of primase 382 437 1.1E-15 T 14-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 AMIS_12240 33bf241a49dfd20ca2fa3cf6538291c4 620 Gene3D G3DSA:3.90.580.10 4 106 3.0E-34 T 14-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 AMIS_12240 33bf241a49dfd20ca2fa3cf6538291c4 620 SMART SM00400 40 94 1.2E-32 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AMIS_12240 33bf241a49dfd20ca2fa3cf6538291c4 620 TIGRFAM TIGR01391 dnaG: DNA primase 9 429 5.4E-113 T 14-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 AMIS_12240 33bf241a49dfd20ca2fa3cf6538291c4 620 PIRSF PIRSF002811 5 610 1.4E-143 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 AMIS_12240 33bf241a49dfd20ca2fa3cf6538291c4 620 SUPERFAMILY SSF57783 8 102 6.8E-31 T 14-10-2018 AMIS_12240 33bf241a49dfd20ca2fa3cf6538291c4 620 Pfam PF01807 CHC2 zinc finger 9 104 1.1E-32 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AMIS_12240 33bf241a49dfd20ca2fa3cf6538291c4 620 SMART SM00766 470 599 3.0E-17 T 14-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 AMIS_12240 33bf241a49dfd20ca2fa3cf6538291c4 620 Pfam PF13662 Toprim domain 269 340 2.4E-16 T 14-10-2018 IPR006171 TOPRIM domain AMIS_12240 33bf241a49dfd20ca2fa3cf6538291c4 620 Hamap MF_00974 DNA primase [dnaG]. 7 604 25.443 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 AMIS_12240 33bf241a49dfd20ca2fa3cf6538291c4 620 SMART SM00493 268 346 7.3E-16 T 14-10-2018 IPR006171 TOPRIM domain AMIS_53140 0d38b45e40121b4dc86f1f88a7eb8282 1142 Gene3D G3DSA:3.40.50.300 326 477 1.7E-18 T 14-10-2018 AMIS_53140 0d38b45e40121b4dc86f1f88a7eb8282 1142 SUPERFAMILY SSF48452 878 1011 2.38E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_53140 0d38b45e40121b4dc86f1f88a7eb8282 1142 Gene3D G3DSA:1.25.40.10 90 259 1.7E-50 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_53140 0d38b45e40121b4dc86f1f88a7eb8282 1142 Gene3D G3DSA:1.10.10.10 1 89 4.9E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_53140 0d38b45e40121b4dc86f1f88a7eb8282 1142 SMART SM00862 16 85 1.2E-6 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_53140 0d38b45e40121b4dc86f1f88a7eb8282 1142 Pfam PF00486 Transcriptional regulatory protein, C terminal 24 76 6.9E-6 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_53140 0d38b45e40121b4dc86f1f88a7eb8282 1142 SUPERFAMILY SSF48452 982 1095 8.54E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_53140 0d38b45e40121b4dc86f1f88a7eb8282 1142 PRINTS PR00364 Disease resistance protein signature 431 445 6.6E-6 T 14-10-2018 AMIS_53140 0d38b45e40121b4dc86f1f88a7eb8282 1142 PRINTS PR00364 Disease resistance protein signature 546 560 6.6E-6 T 14-10-2018 AMIS_53140 0d38b45e40121b4dc86f1f88a7eb8282 1142 PRINTS PR00364 Disease resistance protein signature 357 372 6.6E-6 T 14-10-2018 AMIS_53140 0d38b45e40121b4dc86f1f88a7eb8282 1142 SUPERFAMILY SSF52540 328 609 3.41E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_53140 0d38b45e40121b4dc86f1f88a7eb8282 1142 Pfam PF03704 Bacterial transcriptional activator domain 92 237 4.7E-40 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain AMIS_53140 0d38b45e40121b4dc86f1f88a7eb8282 1142 SMART SM01043 92 237 1.6E-49 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain AMIS_53140 0d38b45e40121b4dc86f1f88a7eb8282 1142 SMART SM00028 902 935 170.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_53140 0d38b45e40121b4dc86f1f88a7eb8282 1142 SMART SM00028 942 975 48.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_53140 0d38b45e40121b4dc86f1f88a7eb8282 1142 SMART SM00028 982 1015 100.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_53140 0d38b45e40121b4dc86f1f88a7eb8282 1142 SMART SM00028 1024 1057 61.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_53140 0d38b45e40121b4dc86f1f88a7eb8282 1142 SUPERFAMILY SSF48452 87 258 1.37E-36 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_53140 0d38b45e40121b4dc86f1f88a7eb8282 1142 Gene3D G3DSA:1.25.40.10 860 1140 6.1E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_53140 0d38b45e40121b4dc86f1f88a7eb8282 1142 SUPERFAMILY SSF46894 4 85 2.32E-10 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_16060 ccc7e512a42e2b5bf36331928052df3a 698 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 13 462 3.8E-125 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 AMIS_16060 ccc7e512a42e2b5bf36331928052df3a 698 SUPERFAMILY SSF82771 17 101 5.49E-21 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 AMIS_16060 ccc7e512a42e2b5bf36331928052df3a 698 Pfam PF02151 UvrB/uvrC motif 210 242 1.8E-8 T 14-10-2018 IPR001943 UVR domain GO:0005515 AMIS_16060 ccc7e512a42e2b5bf36331928052df3a 698 SMART SM00465 17 99 2.0E-18 T 14-10-2018 IPR000305 GIY-YIG endonuclease AMIS_16060 ccc7e512a42e2b5bf36331928052df3a 698 SUPERFAMILY SSF46600 195 247 1.96E-14 T 14-10-2018 IPR036876 UVR domain superfamily AMIS_16060 ccc7e512a42e2b5bf36331928052df3a 698 Hamap MF_00203 UvrABC system protein C [uvrC]. 4 652 30.318 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 AMIS_16060 ccc7e512a42e2b5bf36331928052df3a 698 Gene3D G3DSA:3.30.420.340 386 478 8.4E-24 T 14-10-2018 IPR038476 UvrC homology region 2 superfamily AMIS_16060 ccc7e512a42e2b5bf36331928052df3a 698 Gene3D G3DSA:3.30.420.340 504 594 5.7E-24 T 14-10-2018 IPR038476 UvrC homology region 2 superfamily AMIS_16060 ccc7e512a42e2b5bf36331928052df3a 698 SMART SM00278 633 652 0.059 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AMIS_16060 ccc7e512a42e2b5bf36331928052df3a 698 SMART SM00278 601 620 130.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AMIS_16060 ccc7e512a42e2b5bf36331928052df3a 698 SUPERFAMILY SSF47781 547 654 2.26E-26 T 14-10-2018 IPR010994 RuvA domain 2-like AMIS_16060 ccc7e512a42e2b5bf36331928052df3a 698 Gene3D G3DSA:4.10.860.10 205 245 1.4E-8 T 14-10-2018 AMIS_16060 ccc7e512a42e2b5bf36331928052df3a 698 Pfam PF14520 Helix-hairpin-helix domain 602 653 5.9E-10 T 14-10-2018 AMIS_16060 ccc7e512a42e2b5bf36331928052df3a 698 Gene3D G3DSA:1.10.150.20 595 654 2.7E-22 T 14-10-2018 AMIS_16060 ccc7e512a42e2b5bf36331928052df3a 698 Pfam PF01541 GIY-YIG catalytic domain 19 92 2.9E-8 T 14-10-2018 IPR000305 GIY-YIG endonuclease AMIS_16060 ccc7e512a42e2b5bf36331928052df3a 698 Gene3D G3DSA:3.40.1440.10 7 103 2.8E-28 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 AMIS_16060 ccc7e512a42e2b5bf36331928052df3a 698 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 394 587 1.5E-50 T 14-10-2018 IPR001162 UvrC family homology region AMIS_71340 580f31a78c37626482f545b75ad8c3ff 420 SUPERFAMILY SSF51126 206 380 1.95E-52 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor AMIS_71340 580f31a78c37626482f545b75ad8c3ff 420 Pfam PF03211 Pectate lyase 195 393 8.5E-80 T 14-10-2018 IPR004898 Pectate lyase PlyH/PlyE-like GO:0005576|GO:0030570 KEGG: 00040+4.2.2.2 AMIS_71340 580f31a78c37626482f545b75ad8c3ff 420 Gene3D G3DSA:2.80.10.50 17 135 1.4E-25 T 14-10-2018 AMIS_71340 580f31a78c37626482f545b75ad8c3ff 420 SUPERFAMILY SSF50370 43 180 8.91E-37 T 14-10-2018 IPR035992 Ricin B-like lectins AMIS_71340 580f31a78c37626482f545b75ad8c3ff 420 SMART SM00458 43 180 7.3E-6 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_71340 580f31a78c37626482f545b75ad8c3ff 420 Gene3D G3DSA:2.160.20.10 203 420 6.5E-79 T 14-10-2018 IPR012334 Pectin lyase fold AMIS_71340 580f31a78c37626482f545b75ad8c3ff 420 Gene3D G3DSA:2.80.10.50 137 191 2.6E-9 T 14-10-2018 AMIS_71340 580f31a78c37626482f545b75ad8c3ff 420 Pfam PF14200 Ricin-type beta-trefoil lectin domain-like 127 183 8.1E-9 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_71340 580f31a78c37626482f545b75ad8c3ff 420 Pfam PF14200 Ricin-type beta-trefoil lectin domain-like 44 119 1.9E-20 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_59260 c865771105b8c5039b512fee780c908e 192 Pfam PF08281 Sigma-70, region 4 129 181 3.4E-11 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_59260 c865771105b8c5039b512fee780c908e 192 Gene3D G3DSA:1.10.10.10 106 188 2.7E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_59260 c865771105b8c5039b512fee780c908e 192 Gene3D G3DSA:1.10.1740.10 23 105 5.8E-14 T 14-10-2018 AMIS_59260 c865771105b8c5039b512fee780c908e 192 SUPERFAMILY SSF88946 24 116 6.28E-16 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_59260 c865771105b8c5039b512fee780c908e 192 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 35 184 6.4E-21 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_59260 c865771105b8c5039b512fee780c908e 192 TIGRFAM TIGR02983 SigE-fam_strep: RNA polymerase sigma-70 factor, sigma-E family 30 186 1.9E-45 T 14-10-2018 IPR014325 RNA polymerase sigma-E factor, actinobacteria GO:0016987 AMIS_59260 c865771105b8c5039b512fee780c908e 192 SUPERFAMILY SSF88659 125 186 1.12E-13 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_59260 c865771105b8c5039b512fee780c908e 192 Pfam PF04542 Sigma-70 region 2 39 104 5.8E-10 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_65310 6fb77362e3ca40aee7f7b3dd14aaa665 288 SUPERFAMILY SSF46689 225 272 1.39E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_65310 6fb77362e3ca40aee7f7b3dd14aaa665 288 Pfam PF12833 Helix-turn-helix domain 191 270 1.2E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMIS_65310 6fb77362e3ca40aee7f7b3dd14aaa665 288 SUPERFAMILY SSF51215 39 114 6.15E-6 T 14-10-2018 IPR037923 Transcription regulator HTH-like AMIS_65310 6fb77362e3ca40aee7f7b3dd14aaa665 288 Gene3D G3DSA:1.10.10.60 169 274 7.9E-22 T 14-10-2018 AMIS_65310 6fb77362e3ca40aee7f7b3dd14aaa665 288 SMART SM00342 185 268 3.1E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMIS_15820 b87c14bf30e9e74d06bfdb07d4443312 897 SMART SM00482 653 860 9.5E-111 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMIS_15820 b87c14bf30e9e74d06bfdb07d4443312 897 SMART SM00474 309 484 1.4E-5 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AMIS_15820 b87c14bf30e9e74d06bfdb07d4443312 897 Gene3D G3DSA:1.10.150.20 677 820 3.0E-102 T 14-10-2018 AMIS_15820 b87c14bf30e9e74d06bfdb07d4443312 897 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 176 3.4E-54 T 14-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 AMIS_15820 b87c14bf30e9e74d06bfdb07d4443312 897 SUPERFAMILY SSF88723 8 160 4.32E-52 T 14-10-2018 IPR029060 PIN-like domain superfamily AMIS_15820 b87c14bf30e9e74d06bfdb07d4443312 897 Gene3D G3DSA:3.30.70.370 631 892 3.0E-102 T 14-10-2018 AMIS_15820 b87c14bf30e9e74d06bfdb07d4443312 897 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 178 272 1.3E-23 T 14-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 AMIS_15820 b87c14bf30e9e74d06bfdb07d4443312 897 Gene3D G3DSA:3.30.420.10 339 509 7.7E-33 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMIS_15820 b87c14bf30e9e74d06bfdb07d4443312 897 SUPERFAMILY SSF56672 493 893 3.0E-140 T 14-10-2018 AMIS_15820 b87c14bf30e9e74d06bfdb07d4443312 897 Gene3D G3DSA:1.20.1060.10 511 625 8.2E-32 T 14-10-2018 AMIS_15820 b87c14bf30e9e74d06bfdb07d4443312 897 TIGRFAM TIGR00593 pola: DNA polymerase I 10 894 1.5E-293 T 14-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMIS_15820 b87c14bf30e9e74d06bfdb07d4443312 897 SUPERFAMILY SSF47807 178 291 5.98E-28 T 14-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily AMIS_15820 b87c14bf30e9e74d06bfdb07d4443312 897 PRINTS PR00868 DNA-polymerase family A (pol I) signature 781 792 1.1E-76 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMIS_15820 b87c14bf30e9e74d06bfdb07d4443312 897 PRINTS PR00868 DNA-polymerase family A (pol I) signature 843 856 1.1E-76 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMIS_15820 b87c14bf30e9e74d06bfdb07d4443312 897 PRINTS PR00868 DNA-polymerase family A (pol I) signature 622 644 1.1E-76 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMIS_15820 b87c14bf30e9e74d06bfdb07d4443312 897 PRINTS PR00868 DNA-polymerase family A (pol I) signature 722 747 1.1E-76 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMIS_15820 b87c14bf30e9e74d06bfdb07d4443312 897 PRINTS PR00868 DNA-polymerase family A (pol I) signature 698 711 1.1E-76 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMIS_15820 b87c14bf30e9e74d06bfdb07d4443312 897 PRINTS PR00868 DNA-polymerase family A (pol I) signature 813 829 1.1E-76 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMIS_15820 b87c14bf30e9e74d06bfdb07d4443312 897 PRINTS PR00868 DNA-polymerase family A (pol I) signature 645 660 1.1E-76 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMIS_15820 b87c14bf30e9e74d06bfdb07d4443312 897 PRINTS PR00868 DNA-polymerase family A (pol I) signature 759 770 1.1E-76 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMIS_15820 b87c14bf30e9e74d06bfdb07d4443312 897 PRINTS PR00868 DNA-polymerase family A (pol I) signature 668 691 1.1E-76 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMIS_15820 b87c14bf30e9e74d06bfdb07d4443312 897 SMART SM00279 180 215 4.3E-9 T 14-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 AMIS_15820 b87c14bf30e9e74d06bfdb07d4443312 897 SMART SM00475 5 268 3.6E-124 T 14-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 AMIS_15820 b87c14bf30e9e74d06bfdb07d4443312 897 Pfam PF00476 DNA polymerase family A 518 893 1.9E-144 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMIS_15820 b87c14bf30e9e74d06bfdb07d4443312 897 Gene3D G3DSA:1.10.150.20 181 253 1.1E-88 T 14-10-2018 AMIS_15820 b87c14bf30e9e74d06bfdb07d4443312 897 SUPERFAMILY SSF53098 313 484 2.73E-28 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily AMIS_15820 b87c14bf30e9e74d06bfdb07d4443312 897 Gene3D G3DSA:3.40.50.1010 10 284 1.1E-88 T 14-10-2018 AMIS_15820 b87c14bf30e9e74d06bfdb07d4443312 897 Pfam PF01612 3'-5' exonuclease 358 440 2.4E-4 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AMIS_72470 322f3792aa7424322283da3146e27cfc 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMIS_72470 322f3792aa7424322283da3146e27cfc 254 SUPERFAMILY SSF51735 8 251 1.45E-78 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_72470 322f3792aa7424322283da3146e27cfc 254 Gene3D G3DSA:3.40.50.720 1 253 7.5E-78 T 14-10-2018 AMIS_72470 322f3792aa7424322283da3146e27cfc 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 3.9E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_72470 322f3792aa7424322283da3146e27cfc 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 3.9E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_72470 322f3792aa7424322283da3146e27cfc 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 3.9E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_72470 322f3792aa7424322283da3146e27cfc 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 3.9E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_72470 322f3792aa7424322283da3146e27cfc 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 3.9E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_72470 322f3792aa7424322283da3146e27cfc 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 3.9E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_72470 322f3792aa7424322283da3146e27cfc 254 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 186 1.5E-5 T 14-10-2018 AMIS_72470 322f3792aa7424322283da3146e27cfc 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 251 1.2E-61 T 14-10-2018 AMIS_72470 322f3792aa7424322283da3146e27cfc 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.4E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_72470 322f3792aa7424322283da3146e27cfc 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 1.4E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_72470 322f3792aa7424322283da3146e27cfc 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.4E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_54470 3fe866fa1515849a2b2a6635a17af647 368 SMART SM00047 204 365 7.9E-35 T 14-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 AMIS_54470 3fe866fa1515849a2b2a6635a17af647 368 Gene3D G3DSA:1.10.530.10 215 365 4.8E-42 T 14-10-2018 AMIS_54470 3fe866fa1515849a2b2a6635a17af647 368 Gene3D G3DSA:4.10.80.30 272 298 4.8E-42 T 14-10-2018 AMIS_54470 3fe866fa1515849a2b2a6635a17af647 368 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 223 360 4.9E-23 T 14-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 AMIS_54470 3fe866fa1515849a2b2a6635a17af647 368 SMART SM00287 127 198 0.018 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type AMIS_54470 3fe866fa1515849a2b2a6635a17af647 368 SMART SM00287 35 105 0.006 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type AMIS_54470 3fe866fa1515849a2b2a6635a17af647 368 PRINTS PR01002 Flagellar protein FlgJ signature 210 233 4.9E-8 T 14-10-2018 AMIS_54470 3fe866fa1515849a2b2a6635a17af647 368 PRINTS PR01002 Flagellar protein FlgJ signature 234 252 4.9E-8 T 14-10-2018 AMIS_54470 3fe866fa1515849a2b2a6635a17af647 368 PRINTS PR01002 Flagellar protein FlgJ signature 299 320 4.9E-8 T 14-10-2018 AMIS_54470 3fe866fa1515849a2b2a6635a17af647 368 PRINTS PR01002 Flagellar protein FlgJ signature 342 360 4.9E-8 T 14-10-2018 AMIS_35340 46189ee28c08d24322be88e8d406bc8a 243 Pfam PF00486 Transcriptional regulatory protein, C terminal 17 90 7.5E-8 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_35340 46189ee28c08d24322be88e8d406bc8a 243 SMART SM00862 16 91 1.6E-9 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_35340 46189ee28c08d24322be88e8d406bc8a 243 Gene3D G3DSA:1.25.40.10 95 166 3.9E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_35340 46189ee28c08d24322be88e8d406bc8a 243 Pfam PF03704 Bacterial transcriptional activator domain 98 159 4.3E-7 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain AMIS_35340 46189ee28c08d24322be88e8d406bc8a 243 Gene3D G3DSA:1.10.10.10 1 93 1.2E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_35340 46189ee28c08d24322be88e8d406bc8a 243 SUPERFAMILY SSF46894 2 91 1.9E-11 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_59990 ceeb4849470c223c91a3c02db367734c 435 SUPERFAMILY SSF53850 21 345 1.97E-39 T 14-10-2018 AMIS_59990 ceeb4849470c223c91a3c02db367734c 435 Gene3D G3DSA:3.40.190.10 39 397 7.1E-39 T 14-10-2018 AMIS_59990 ceeb4849470c223c91a3c02db367734c 435 Pfam PF01547 Bacterial extracellular solute-binding protein 54 338 2.4E-21 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein AMIS_24410 2881c63e2eb529cb5537d9c497e44867 510 Pfam PF00092 von Willebrand factor type A domain 327 496 1.2E-9 T 14-10-2018 IPR002035 von Willebrand factor, type A AMIS_24410 2881c63e2eb529cb5537d9c497e44867 510 Gene3D G3DSA:3.40.50.410 325 507 5.6E-24 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMIS_24410 2881c63e2eb529cb5537d9c497e44867 510 SUPERFAMILY SSF53850 29 311 2.56E-13 T 14-10-2018 AMIS_24410 2881c63e2eb529cb5537d9c497e44867 510 Pfam PF13531 Bacterial extracellular solute-binding protein 30 277 3.0E-19 T 14-10-2018 AMIS_24410 2881c63e2eb529cb5537d9c497e44867 510 SMART SM00327 324 500 8.4E-9 T 14-10-2018 IPR002035 von Willebrand factor, type A AMIS_24410 2881c63e2eb529cb5537d9c497e44867 510 SUPERFAMILY SSF53300 326 505 3.41E-18 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMIS_24410 2881c63e2eb529cb5537d9c497e44867 510 Gene3D G3DSA:3.40.190.10 102 291 3.1E-5 T 14-10-2018 AMIS_24410 2881c63e2eb529cb5537d9c497e44867 510 Gene3D G3DSA:3.40.190.10 113 240 3.1E-5 T 14-10-2018 AMIS_59510 b9296b39e87ae5413f1ae64fff32cb4b 355 Gene3D G3DSA:3.40.50.2300 140 349 1.0E-122 T 14-10-2018 AMIS_59510 b9296b39e87ae5413f1ae64fff32cb4b 355 SUPERFAMILY SSF53822 35 341 5.65E-64 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_59510 b9296b39e87ae5413f1ae64fff32cb4b 355 Gene3D G3DSA:3.40.50.2300 38 328 1.0E-122 T 14-10-2018 AMIS_59510 b9296b39e87ae5413f1ae64fff32cb4b 355 Pfam PF13407 Periplasmic binding protein domain 38 306 3.6E-59 T 14-10-2018 IPR025997 Periplasmic binding protein AMIS_8450 0f9ad736cf9a3f355d586a48ba276663 461 Gene3D G3DSA:1.20.1250.20 257 460 3.9E-14 T 14-10-2018 AMIS_8450 0f9ad736cf9a3f355d586a48ba276663 461 SUPERFAMILY SSF103473 14 457 6.02E-51 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_8450 0f9ad736cf9a3f355d586a48ba276663 461 Pfam PF07690 Major Facilitator Superfamily 23 411 1.2E-29 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_8450 0f9ad736cf9a3f355d586a48ba276663 461 Gene3D G3DSA:1.20.1720.10 14 254 2.1E-26 T 14-10-2018 AMIS_44690 11763cc8cf19786c2e4267827e66d40c 191 Pfam PF04542 Sigma-70 region 2 24 90 9.0E-14 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_44690 11763cc8cf19786c2e4267827e66d40c 191 Pfam PF08281 Sigma-70, region 4 126 174 1.5E-14 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_44690 11763cc8cf19786c2e4267827e66d40c 191 Gene3D G3DSA:1.10.10.10 120 181 3.5E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_44690 11763cc8cf19786c2e4267827e66d40c 191 Gene3D G3DSA:1.10.1740.10 10 87 8.6E-16 T 14-10-2018 AMIS_44690 11763cc8cf19786c2e4267827e66d40c 191 SUPERFAMILY SSF88946 19 99 1.29E-17 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_44690 11763cc8cf19786c2e4267827e66d40c 191 SUPERFAMILY SSF88659 118 178 1.2E-13 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_44690 11763cc8cf19786c2e4267827e66d40c 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 177 1.3E-23 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_2170 fb2c2942a5fdc339915cf0f05b4159c4 283 Gene3D G3DSA:3.40.190.10 82 182 3.7E-90 T 14-10-2018 AMIS_2170 fb2c2942a5fdc339915cf0f05b4159c4 283 Pfam PF02621 Menaquinone biosynthesis 9 266 2.2E-73 T 14-10-2018 IPR003773 Menaquinone biosynthesis enzyme AMIS_2170 fb2c2942a5fdc339915cf0f05b4159c4 283 Gene3D G3DSA:3.40.190.10 9 260 3.7E-90 T 14-10-2018 AMIS_2170 fb2c2942a5fdc339915cf0f05b4159c4 283 SUPERFAMILY SSF53850 8 271 1.63E-79 T 14-10-2018 AMIS_2170 fb2c2942a5fdc339915cf0f05b4159c4 283 Hamap MF_00995 Chorismate dehydratase [mqnA]. 9 270 31.749 T 14-10-2018 IPR030868 Chorismate dehydratase GO:0009234|GO:0016829 KEGG: 00130+4.2.1.151|MetaCyc: PWY-7371|MetaCyc: PWY-7374 AMIS_58790 46c9c94c7e81bfc8cbd6dd4b0e18df64 390 Gene3D G3DSA:3.30.70.80 36 104 4.1E-14 T 14-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 AMIS_58790 46c9c94c7e81bfc8cbd6dd4b0e18df64 390 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 178 188 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site AMIS_58790 46c9c94c7e81bfc8cbd6dd4b0e18df64 390 SUPERFAMILY SSF52743 112 382 2.23E-71 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AMIS_58790 46c9c94c7e81bfc8cbd6dd4b0e18df64 390 Pfam PF00082 Subtilase family 144 369 1.3E-32 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AMIS_58790 46c9c94c7e81bfc8cbd6dd4b0e18df64 390 Gene3D G3DSA:3.40.50.200 109 389 1.8E-84 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AMIS_58790 46c9c94c7e81bfc8cbd6dd4b0e18df64 390 SUPERFAMILY SSF54897 41 105 7.94E-10 T 14-10-2018 AMIS_58790 46c9c94c7e81bfc8cbd6dd4b0e18df64 390 Pfam PF05922 Peptidase inhibitor I9 59 105 8.9E-9 T 14-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 AMIS_58790 46c9c94c7e81bfc8cbd6dd4b0e18df64 390 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 142 153 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site AMIS_58790 46c9c94c7e81bfc8cbd6dd4b0e18df64 390 PRINTS PR00723 Subtilisin serine protease family (S8) signature 332 348 3.6E-18 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMIS_58790 46c9c94c7e81bfc8cbd6dd4b0e18df64 390 PRINTS PR00723 Subtilisin serine protease family (S8) signature 174 187 3.6E-18 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMIS_58790 46c9c94c7e81bfc8cbd6dd4b0e18df64 390 PRINTS PR00723 Subtilisin serine protease family (S8) signature 137 156 3.6E-18 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMIS_58790 46c9c94c7e81bfc8cbd6dd4b0e18df64 390 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 333 343 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site AMIS_41890 d91f190c856d311c77ef0d3d70a2969e 210 SUPERFAMILY SSF53335 14 193 6.25E-39 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_41890 d91f190c856d311c77ef0d3d70a2969e 210 Pfam PF13649 Methyltransferase domain 50 137 7.8E-19 T 14-10-2018 AMIS_41890 d91f190c856d311c77ef0d3d70a2969e 210 Gene3D G3DSA:3.40.50.150 6 197 4.6E-42 T 14-10-2018 AMIS_51110 2f65d0b33f4b35845e0af8dcb1204ffc 375 Gene3D G3DSA:3.40.50.2300 154 354 1.0E-90 T 14-10-2018 AMIS_51110 2f65d0b33f4b35845e0af8dcb1204ffc 375 SUPERFAMILY SSF53822 51 349 2.04E-53 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_51110 2f65d0b33f4b35845e0af8dcb1204ffc 375 Pfam PF13407 Periplasmic binding protein domain 54 312 8.5E-52 T 14-10-2018 IPR025997 Periplasmic binding protein AMIS_51110 2f65d0b33f4b35845e0af8dcb1204ffc 375 Gene3D G3DSA:3.40.50.2300 51 336 1.0E-90 T 14-10-2018 AMIS_72370 04cc09dce8af5a05affeb9d40213f052 109 Gene3D G3DSA:1.20.1250.20 53 109 3.8E-5 T 14-10-2018 AMIS_72370 04cc09dce8af5a05affeb9d40213f052 109 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 2 107 21.621 T 14-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 AMIS_72370 04cc09dce8af5a05affeb9d40213f052 109 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 1 108 3.5E-47 T 14-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 AMIS_72370 04cc09dce8af5a05affeb9d40213f052 109 SUPERFAMILY SSF103481 7 106 5.62E-9 T 14-10-2018 AMIS_46600 4854b9eae1deaa46ad1c3f8d69dc3879 151 Pfam PF00932 Lamin Tail Domain 25 141 3.4E-22 T 14-10-2018 IPR001322 Lamin tail domain AMIS_46600 4854b9eae1deaa46ad1c3f8d69dc3879 151 SUPERFAMILY SSF74853 50 140 3.01E-14 T 14-10-2018 IPR036415 Lamin tail domain superfamily AMIS_10070 dc41f4df885c4bfe2acb058f3cdb19eb 414 Gene3D G3DSA:3.30.70.2520 283 376 2.8E-35 T 14-10-2018 AMIS_10070 dc41f4df885c4bfe2acb058f3cdb19eb 414 Gene3D G3DSA:3.30.465.10 73 281 1.6E-89 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AMIS_10070 dc41f4df885c4bfe2acb058f3cdb19eb 414 PIRSF PIRSF000136 1 227 1.1E-41 T 14-10-2018 IPR010031 L-gulonolactone/D-arabinono-1,4-lactone oxidase GO:0016899|GO:0055114 AMIS_10070 dc41f4df885c4bfe2acb058f3cdb19eb 414 PIRSF PIRSF000136 278 414 3.4E-8 T 14-10-2018 IPR010031 L-gulonolactone/D-arabinono-1,4-lactone oxidase GO:0016899|GO:0055114 AMIS_10070 dc41f4df885c4bfe2acb058f3cdb19eb 414 Gene3D G3DSA:1.10.45.10 378 414 9.1E-8 T 14-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AMIS_10070 dc41f4df885c4bfe2acb058f3cdb19eb 414 Pfam PF04030 D-arabinono-1,4-lactone oxidase 285 410 3.0E-21 T 14-10-2018 IPR007173 D-arabinono-1,4-lactone oxidase GO:0003885|GO:0016020|GO:0055114 AMIS_10070 dc41f4df885c4bfe2acb058f3cdb19eb 414 Gene3D G3DSA:3.30.70.2530 179 264 1.6E-89 T 14-10-2018 AMIS_10070 dc41f4df885c4bfe2acb058f3cdb19eb 414 Pfam PF01565 FAD binding domain 18 147 3.4E-21 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AMIS_10070 dc41f4df885c4bfe2acb058f3cdb19eb 414 Gene3D G3DSA:3.30.43.10 1 66 1.4E-21 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 AMIS_10070 dc41f4df885c4bfe2acb058f3cdb19eb 414 SUPERFAMILY SSF56176 4 176 4.16E-35 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AMIS_23050 cf3b005a6ca4a4499c73c4523573719d 455 SUPERFAMILY SSF49384 354 452 4.33E-27 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 AMIS_23050 cf3b005a6ca4a4499c73c4523573719d 455 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 37 280 2.5E-30 T 14-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 AMIS_23050 cf3b005a6ca4a4499c73c4523573719d 455 SMART SM00637 359 452 3.1E-37 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 AMIS_23050 cf3b005a6ca4a4499c73c4523573719d 455 Pfam PF00553 Cellulose binding domain 359 450 7.2E-25 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 AMIS_23050 cf3b005a6ca4a4499c73c4523573719d 455 Gene3D G3DSA:3.20.20.80 20 321 2.0E-84 T 14-10-2018 AMIS_23050 cf3b005a6ca4a4499c73c4523573719d 455 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 145 154 - T 14-10-2018 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 AMIS_23050 cf3b005a6ca4a4499c73c4523573719d 455 Gene3D G3DSA:2.60.40.290 353 454 1.2E-27 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 AMIS_23050 cf3b005a6ca4a4499c73c4523573719d 455 SUPERFAMILY SSF51445 28 318 9.17E-69 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_16280 c4ca9c10aa423315190fd10327053bf5 110 Gene3D G3DSA:2.102.10.10 2 107 2.1E-34 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AMIS_16280 c4ca9c10aa423315190fd10327053bf5 110 Pfam PF00355 Rieske [2Fe-2S] domain 6 90 6.6E-18 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AMIS_16280 c4ca9c10aa423315190fd10327053bf5 110 SUPERFAMILY SSF50022 3 104 1.7E-30 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AMIS_11340 a5d62e89f2a2c3dcd6dbb86f3b4c196a 537 SMART SM00283 271 536 1.1E-48 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_11340 a5d62e89f2a2c3dcd6dbb86f3b4c196a 537 Pfam PF00672 HAMP domain 226 270 1.0E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_11340 a5d62e89f2a2c3dcd6dbb86f3b4c196a 537 SMART SM00304 442 495 35.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_11340 a5d62e89f2a2c3dcd6dbb86f3b4c196a 537 SMART SM00304 222 274 1.7E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_11340 a5d62e89f2a2c3dcd6dbb86f3b4c196a 537 Gene3D G3DSA:1.10.287.950 221 537 3.0E-58 T 14-10-2018 AMIS_11340 a5d62e89f2a2c3dcd6dbb86f3b4c196a 537 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 7 32 5.3E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_11340 a5d62e89f2a2c3dcd6dbb86f3b4c196a 537 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 199 219 5.3E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_11340 a5d62e89f2a2c3dcd6dbb86f3b4c196a 537 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 380 407 5.3E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_11340 a5d62e89f2a2c3dcd6dbb86f3b4c196a 537 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 409 438 5.3E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_11340 a5d62e89f2a2c3dcd6dbb86f3b4c196a 537 SUPERFAMILY SSF58104 242 536 2.75E-61 T 14-10-2018 AMIS_11340 a5d62e89f2a2c3dcd6dbb86f3b4c196a 537 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 347 503 8.3E-30 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_11390 e5a44f7af652ac38fef6d0133e507f0d 824 Pfam PF13581 Histidine kinase-like ATPase domain 707 817 7.7E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_11390 e5a44f7af652ac38fef6d0133e507f0d 824 SMART SM00065 321 461 0.068 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_11390 e5a44f7af652ac38fef6d0133e507f0d 824 SMART SM00065 163 317 7.6E-9 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_11390 e5a44f7af652ac38fef6d0133e507f0d 824 SMART SM00091 11 78 7.6E-4 T 14-10-2018 IPR000014 PAS domain AMIS_11390 e5a44f7af652ac38fef6d0133e507f0d 824 SUPERFAMILY SSF55781 385 462 5.67E-10 T 14-10-2018 AMIS_11390 e5a44f7af652ac38fef6d0133e507f0d 824 SMART SM00331 483 695 2.3E-34 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_11390 e5a44f7af652ac38fef6d0133e507f0d 824 SUPERFAMILY SSF55874 731 817 1.12E-7 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_11390 e5a44f7af652ac38fef6d0133e507f0d 824 Gene3D G3DSA:3.30.450.40 326 465 3.6E-11 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_11390 e5a44f7af652ac38fef6d0133e507f0d 824 Gene3D G3DSA:3.30.450.40 147 320 6.7E-21 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_11390 e5a44f7af652ac38fef6d0133e507f0d 824 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 510 694 2.0E-40 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_11390 e5a44f7af652ac38fef6d0133e507f0d 824 Pfam PF13492 GAF domain 166 309 3.2E-9 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_11390 e5a44f7af652ac38fef6d0133e507f0d 824 Gene3D G3DSA:3.30.565.10 698 821 8.2E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_11390 e5a44f7af652ac38fef6d0133e507f0d 824 Pfam PF13426 PAS domain 21 116 2.5E-8 T 14-10-2018 IPR000014 PAS domain AMIS_11390 e5a44f7af652ac38fef6d0133e507f0d 824 Gene3D G3DSA:3.60.40.10 480 694 1.8E-51 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_11390 e5a44f7af652ac38fef6d0133e507f0d 824 Gene3D G3DSA:3.30.450.20 11 146 1.1E-12 T 14-10-2018 AMIS_11390 e5a44f7af652ac38fef6d0133e507f0d 824 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 16 134 2.7E-10 T 14-10-2018 IPR000014 PAS domain AMIS_11390 e5a44f7af652ac38fef6d0133e507f0d 824 SUPERFAMILY SSF55785 14 115 1.03E-12 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_11390 e5a44f7af652ac38fef6d0133e507f0d 824 SUPERFAMILY SSF55781 166 320 8.72E-18 T 14-10-2018 AMIS_41850 8f164065e188abbd777f6a305e8de3ef 556 Gene3D G3DSA:3.90.700.10 277 490 2.2E-62 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMIS_41850 8f164065e188abbd777f6a305e8de3ef 556 PIRSF PIRSF036654 1 556 1.1E-278 T 14-10-2018 IPR014614 Uncharacterised conserved protein UCP036654 GO:0016627|GO:0055114 AMIS_41850 8f164065e188abbd777f6a305e8de3ef 556 SUPERFAMILY SSF51905 2 554 1.57E-39 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_41850 8f164065e188abbd777f6a305e8de3ef 556 Pfam PF00890 FAD binding domain 4 538 7.4E-109 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMIS_41850 8f164065e188abbd777f6a305e8de3ef 556 Gene3D G3DSA:3.50.50.60 3 552 2.2E-62 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_30150 ad6953ac9c98a2b675a6e4978ed8a192 187 SUPERFAMILY SSF47240 10 164 3.52E-38 T 14-10-2018 IPR009078 Ferritin-like superfamily AMIS_30150 ad6953ac9c98a2b675a6e4978ed8a192 187 Pfam PF00210 Ferritin-like domain 27 165 4.9E-22 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AMIS_30150 ad6953ac9c98a2b675a6e4978ed8a192 187 PIRSF PIRSF005900 3 168 9.5E-51 T 14-10-2018 IPR002177 DNA-binding protein Dps AMIS_30150 ad6953ac9c98a2b675a6e4978ed8a192 187 Gene3D G3DSA:1.20.1260.10 5 172 3.8E-51 T 14-10-2018 IPR012347 Ferritin-like AMIS_30150 ad6953ac9c98a2b675a6e4978ed8a192 187 ProSitePatterns PS00818 Dps protein family signature 1. 46 62 - T 14-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 AMIS_30150 ad6953ac9c98a2b675a6e4978ed8a192 187 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 141 159 2.1E-11 T 14-10-2018 IPR002177 DNA-binding protein Dps AMIS_30150 ad6953ac9c98a2b675a6e4978ed8a192 187 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 46 62 2.1E-11 T 14-10-2018 IPR002177 DNA-binding protein Dps AMIS_30150 ad6953ac9c98a2b675a6e4978ed8a192 187 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 70 86 2.1E-11 T 14-10-2018 IPR002177 DNA-binding protein Dps AMIS_11890 3016492cfabd4b0baa50436c5518b9a7 260 Pfam PF01255 Putative undecaprenyl diphosphate synthase 30 250 2.1E-72 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AMIS_11890 3016492cfabd4b0baa50436c5518b9a7 260 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 196 213 - T 14-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 AMIS_11890 3016492cfabd4b0baa50436c5518b9a7 260 SUPERFAMILY SSF64005 22 246 4.71E-81 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 AMIS_11890 3016492cfabd4b0baa50436c5518b9a7 260 Gene3D G3DSA:3.40.1180.10 2 245 1.3E-92 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 AMIS_11890 3016492cfabd4b0baa50436c5518b9a7 260 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 23 251 36.37 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AMIS_11890 3016492cfabd4b0baa50436c5518b9a7 260 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 23 250 9.4E-72 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AMIS_29390 bd075fcc0548a88fefe7ed71154d3e44 996 Pfam PF13191 AAA ATPase domain 11 186 1.0E-11 T 14-10-2018 AMIS_29390 bd075fcc0548a88fefe7ed71154d3e44 996 Gene3D G3DSA:1.10.10.10 852 994 4.3E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_29390 bd075fcc0548a88fefe7ed71154d3e44 996 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 939 953 9.4E-5 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_29390 bd075fcc0548a88fefe7ed71154d3e44 996 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 953 969 9.4E-5 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_29390 bd075fcc0548a88fefe7ed71154d3e44 996 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 969 981 9.4E-5 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_29390 bd075fcc0548a88fefe7ed71154d3e44 996 Gene3D G3DSA:1.25.40.10 628 791 4.9E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_29390 bd075fcc0548a88fefe7ed71154d3e44 996 SUPERFAMILY SSF52540 20 197 3.03E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_29390 bd075fcc0548a88fefe7ed71154d3e44 996 SUPERFAMILY SSF46894 929 990 1.36E-12 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_29390 bd075fcc0548a88fefe7ed71154d3e44 996 Pfam PF00196 Bacterial regulatory proteins, luxR family 938 989 1.4E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_29390 bd075fcc0548a88fefe7ed71154d3e44 996 SMART SM00421 936 993 3.1E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_14700 6195e888f7040c2fb12131639731e4dc 349 Gene3D G3DSA:3.90.1150.10 257 349 9.0E-22 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMIS_14700 6195e888f7040c2fb12131639731e4dc 349 Gene3D G3DSA:3.40.640.10 7 256 8.3E-83 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_14700 6195e888f7040c2fb12131639731e4dc 349 PIRSF PIRSF017617 3 349 8.8E-123 T 14-10-2018 IPR023603 Threonine aldolase AMIS_14700 6195e888f7040c2fb12131639731e4dc 349 Pfam PF01212 Beta-eliminating lyase 13 292 1.1E-83 T 14-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 AMIS_14700 6195e888f7040c2fb12131639731e4dc 349 SUPERFAMILY SSF53383 13 347 1.75E-108 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_46080 1c83fe147aa5146e9422a664d3a3fe97 177 Gene3D G3DSA:2.40.50.140 101 172 2.5E-5 T 14-10-2018 AMIS_46080 1c83fe147aa5146e9422a664d3a3fe97 177 Pfam PF01957 NfeD-like C-terminal, partner-binding 16 168 1.4E-6 T 14-10-2018 IPR002810 NfeD-like, C-terminal domain AMIS_80850 bc239b4b63dd825ad566a7e64fbd1569 484 SUPERFAMILY SSF48024 46 157 1.28E-35 T 14-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 AMIS_80850 bc239b4b63dd825ad566a7e64fbd1569 484 Gene3D G3DSA:3.40.50.300 210 484 6.2E-105 T 14-10-2018 AMIS_80850 bc239b4b63dd825ad566a7e64fbd1569 484 Pfam PF00772 DnaB-like helicase N terminal domain 48 149 3.2E-32 T 14-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 AMIS_80850 bc239b4b63dd825ad566a7e64fbd1569 484 SUPERFAMILY SSF52540 226 469 1.23E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_80850 bc239b4b63dd825ad566a7e64fbd1569 484 SMART SM00382 244 441 4.9E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_80850 bc239b4b63dd825ad566a7e64fbd1569 484 Gene3D G3DSA:1.10.860.10 43 208 1.9E-57 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AMIS_80850 bc239b4b63dd825ad566a7e64fbd1569 484 Pfam PF03796 DnaB-like helicase C terminal domain 227 480 1.2E-105 T 14-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 AMIS_80850 bc239b4b63dd825ad566a7e64fbd1569 484 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 48 482 7.2E-162 T 14-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 AMIS_51900 ebc9b4357fe64c88ff0f71a988ae6b93 318 Pfam PF14525 AraC-binding-like domain 15 193 5.7E-24 T 14-10-2018 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like AMIS_51900 ebc9b4357fe64c88ff0f71a988ae6b93 318 SMART SM00342 231 316 1.1E-26 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMIS_51900 ebc9b4357fe64c88ff0f71a988ae6b93 318 SUPERFAMILY SSF46689 269 314 1.57E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_51900 ebc9b4357fe64c88ff0f71a988ae6b93 318 SUPERFAMILY SSF46689 216 266 4.26E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_51900 ebc9b4357fe64c88ff0f71a988ae6b93 318 Gene3D G3DSA:1.10.10.60 215 318 2.5E-33 T 14-10-2018 AMIS_51900 ebc9b4357fe64c88ff0f71a988ae6b93 318 Pfam PF12833 Helix-turn-helix domain 237 316 2.6E-24 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMIS_51900 ebc9b4357fe64c88ff0f71a988ae6b93 318 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 268 312 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AMIS_51900 ebc9b4357fe64c88ff0f71a988ae6b93 318 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 300 316 3.1E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMIS_51900 ebc9b4357fe64c88ff0f71a988ae6b93 318 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 285 300 3.1E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMIS_16340 495a3e419178dfc69c6e20a8186964fe 302 PRINTS PR00412 Epoxide hydrolase signature 275 297 1.3E-10 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_16340 495a3e419178dfc69c6e20a8186964fe 302 PRINTS PR00412 Epoxide hydrolase signature 94 107 1.3E-10 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_16340 495a3e419178dfc69c6e20a8186964fe 302 PRINTS PR00412 Epoxide hydrolase signature 18 36 1.3E-10 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_16340 495a3e419178dfc69c6e20a8186964fe 302 PRINTS PR00412 Epoxide hydrolase signature 38 53 1.3E-10 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_16340 495a3e419178dfc69c6e20a8186964fe 302 PRINTS PR00111 Alpha/beta hydrolase fold signature 94 107 8.1E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_16340 495a3e419178dfc69c6e20a8186964fe 302 PRINTS PR00111 Alpha/beta hydrolase fold signature 80 93 8.1E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_16340 495a3e419178dfc69c6e20a8186964fe 302 PRINTS PR00111 Alpha/beta hydrolase fold signature 38 53 8.1E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_16340 495a3e419178dfc69c6e20a8186964fe 302 SUPERFAMILY SSF53474 3 299 4.74E-51 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_16340 495a3e419178dfc69c6e20a8186964fe 302 Gene3D G3DSA:3.40.50.1820 1 300 4.3E-50 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_16340 495a3e419178dfc69c6e20a8186964fe 302 Pfam PF00561 alpha/beta hydrolase fold 13 287 1.6E-22 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_73380 7fbf629048af1151371d6ee9457a9e94 439 Gene3D G3DSA:3.30.830.10 230 429 1.8E-39 T 14-10-2018 AMIS_73380 7fbf629048af1151371d6ee9457a9e94 439 Gene3D G3DSA:3.30.830.10 23 223 3.4E-32 T 14-10-2018 AMIS_73380 7fbf629048af1151371d6ee9457a9e94 439 Pfam PF00675 Insulinase (Peptidase family M16) 58 167 6.0E-7 T 14-10-2018 IPR011765 Peptidase M16, N-terminal AMIS_73380 7fbf629048af1151371d6ee9457a9e94 439 SUPERFAMILY SSF63411 13 230 4.71E-34 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMIS_73380 7fbf629048af1151371d6ee9457a9e94 439 SUPERFAMILY SSF63411 241 431 1.45E-34 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMIS_73380 7fbf629048af1151371d6ee9457a9e94 439 Pfam PF05193 Peptidase M16 inactive domain 183 352 1.1E-17 T 14-10-2018 IPR007863 Peptidase M16, C-terminal AMIS_63590 67c81b69e6055fca01200bc2e3a4606b 414 Pfam PF00999 Sodium/hydrogen exchanger family 10 404 1.9E-41 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AMIS_63590 67c81b69e6055fca01200bc2e3a4606b 414 Gene3D G3DSA:1.20.1530.20 6 412 4.2E-12 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily AMIS_63030 1bd36e00d0eabc57ffc3d4f365e29fe7 243 SUPERFAMILY SSF53335 21 210 1.07E-24 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_63030 1bd36e00d0eabc57ffc3d4f365e29fe7 243 Gene3D G3DSA:3.40.50.150 7 238 2.1E-72 T 14-10-2018 AMIS_63030 1bd36e00d0eabc57ffc3d4f365e29fe7 243 Gene3D G3DSA:1.10.150.290 125 222 2.1E-72 T 14-10-2018 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal GO:0030798 AMIS_63030 1bd36e00d0eabc57ffc3d4f365e29fe7 243 Pfam PF13489 Methyltransferase domain 12 141 2.0E-12 T 14-10-2018 AMIS_38830 02621a0c103c9e18606067b519f7b940 306 SUPERFAMILY SSF103481 189 280 6.54E-10 T 14-10-2018 AMIS_38830 02621a0c103c9e18606067b519f7b940 306 Pfam PF00892 EamA-like transporter family 149 279 2.3E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMIS_38830 02621a0c103c9e18606067b519f7b940 306 SUPERFAMILY SSF103481 45 143 4.71E-6 T 14-10-2018 AMIS_59060 ab7eb7f6f40fa927c8819a6f786d7680 409 SUPERFAMILY SSF53383 34 315 2.34E-31 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_59060 ab7eb7f6f40fa927c8819a6f786d7680 409 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 393 159.877 T 14-10-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 AMIS_59060 ab7eb7f6f40fa927c8819a6f786d7680 409 Gene3D G3DSA:3.90.1150.110 23 375 1.7E-107 T 14-10-2018 AMIS_59060 ab7eb7f6f40fa927c8819a6f786d7680 409 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 27 388 1.9E-116 T 14-10-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 AMIS_59060 ab7eb7f6f40fa927c8819a6f786d7680 409 Gene3D G3DSA:3.40.640.10 49 299 1.7E-107 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_59060 ab7eb7f6f40fa927c8819a6f786d7680 409 Pfam PF03841 L-seryl-tRNA selenium transferase 37 375 5.9E-95 T 14-10-2018 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 AMIS_3770 67e4b28e415bbe0450632c1c07fe6f48 397 Pfam PF07690 Major Facilitator Superfamily 217 378 1.1E-9 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_3770 67e4b28e415bbe0450632c1c07fe6f48 397 Gene3D G3DSA:1.20.1250.20 207 383 5.1E-15 T 14-10-2018 AMIS_3770 67e4b28e415bbe0450632c1c07fe6f48 397 Gene3D G3DSA:1.20.1250.20 15 193 2.1E-10 T 14-10-2018 AMIS_3770 67e4b28e415bbe0450632c1c07fe6f48 397 SUPERFAMILY SSF103473 17 384 2.88E-34 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_13830 4c3f66e35f33f22bcf55d0884aab85c7 419 SUPERFAMILY SSF50249 8 99 6.86E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMIS_13830 4c3f66e35f33f22bcf55d0884aab85c7 419 Pfam PF00152 tRNA synthetases class II (D, K and N) 114 413 3.3E-68 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMIS_13830 4c3f66e35f33f22bcf55d0884aab85c7 419 Pfam PF01336 OB-fold nucleic acid binding domain 17 91 1.1E-12 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AMIS_13830 4c3f66e35f33f22bcf55d0884aab85c7 419 Gene3D G3DSA:3.30.930.10 102 407 2.0E-85 T 14-10-2018 AMIS_13830 4c3f66e35f33f22bcf55d0884aab85c7 419 SUPERFAMILY SSF55681 114 413 8.56E-74 T 14-10-2018 AMIS_13830 4c3f66e35f33f22bcf55d0884aab85c7 419 PRINTS PR01042 Aspartyl-tRNA synthetase signature 334 350 1.5E-20 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMIS_13830 4c3f66e35f33f22bcf55d0884aab85c7 419 PRINTS PR01042 Aspartyl-tRNA synthetase signature 197 210 1.5E-20 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMIS_13830 4c3f66e35f33f22bcf55d0884aab85c7 419 PRINTS PR01042 Aspartyl-tRNA synthetase signature 181 193 1.5E-20 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMIS_13830 4c3f66e35f33f22bcf55d0884aab85c7 419 PRINTS PR01042 Aspartyl-tRNA synthetase signature 374 388 1.5E-20 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMIS_13830 4c3f66e35f33f22bcf55d0884aab85c7 419 Hamap MF_02075 Aspartate--tRNA(Asp) ligase [aspS]. 1 419 36.384 T 14-10-2018 IPR004523 Aspartate-tRNA synthetase, type 2 GO:0000166|GO:0004815|GO:0005524|GO:0005737|GO:0006422 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AMIS_13830 4c3f66e35f33f22bcf55d0884aab85c7 419 Gene3D G3DSA:2.40.50.140 2 97 7.7E-21 T 14-10-2018 AMIS_61980 b3772fc9395c821c8a6db8d1afe2f85e 220 SMART SM00563 39 158 5.7E-29 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AMIS_61980 b3772fc9395c821c8a6db8d1afe2f85e 220 Pfam PF01553 Acyltransferase 25 155 2.2E-22 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AMIS_61980 b3772fc9395c821c8a6db8d1afe2f85e 220 SUPERFAMILY SSF69593 3 216 1.57E-40 T 14-10-2018 AMIS_62850 8a9d6ba65fca7646d6b23df0b815d7d7 210 Gene3D G3DSA:3.40.50.880 8 209 1.9E-74 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_62850 8a9d6ba65fca7646d6b23df0b815d7d7 210 ProSitePatterns PS01236 PdxT/SNO family family signature. 49 59 - T 14-10-2018 IPR021196 PdxT/SNO family, conserved site KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 AMIS_62850 8a9d6ba65fca7646d6b23df0b815d7d7 210 TIGRFAM TIGR03800 PLP_synth_Pdx2: pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 12 201 1.6E-70 T 14-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 AMIS_62850 8a9d6ba65fca7646d6b23df0b815d7d7 210 SUPERFAMILY SSF52317 11 205 4.82E-50 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_62850 8a9d6ba65fca7646d6b23df0b815d7d7 210 PIRSF PIRSF005639 7 207 7.4E-72 T 14-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 AMIS_62850 8a9d6ba65fca7646d6b23df0b815d7d7 210 Pfam PF01174 SNO glutamine amidotransferase family 14 204 1.9E-57 T 14-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 AMIS_62850 8a9d6ba65fca7646d6b23df0b815d7d7 210 Hamap MF_01615 Pyridoxal 5'-phosphate synthase subunit PdxT [pdxT]. 12 202 37.533 T 14-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 AMIS_64510 78f0cb18c1da141b213cd35ee32753ad 693 Gene3D G3DSA:3.30.230.10 250 449 1.4E-43 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMIS_64510 78f0cb18c1da141b213cd35ee32753ad 693 Pfam PF01751 Toprim domain 470 570 2.0E-13 T 14-10-2018 IPR006171 TOPRIM domain AMIS_64510 78f0cb18c1da141b213cd35ee32753ad 693 SUPERFAMILY SSF55874 17 240 7.03E-52 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_64510 78f0cb18c1da141b213cd35ee32753ad 693 Pfam PF00204 DNA gyrase B 251 441 5.6E-45 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AMIS_64510 78f0cb18c1da141b213cd35ee32753ad 693 Gene3D G3DSA:3.30.565.10 14 249 3.6E-69 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_64510 78f0cb18c1da141b213cd35ee32753ad 693 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 42 147 7.7E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_64510 78f0cb18c1da141b213cd35ee32753ad 693 SMART SM00433 46 684 6.3E-206 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AMIS_64510 78f0cb18c1da141b213cd35ee32753ad 693 SMART SM00387 42 181 4.2E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_64510 78f0cb18c1da141b213cd35ee32753ad 693 Gene3D G3DSA:3.40.50.670 450 693 3.4E-85 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AMIS_64510 78f0cb18c1da141b213cd35ee32753ad 693 PRINTS PR01159 DNA gyrase subunit B signature 17 27 7.0E-28 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMIS_64510 78f0cb18c1da141b213cd35ee32753ad 693 PRINTS PR01159 DNA gyrase subunit B signature 660 676 7.0E-28 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMIS_64510 78f0cb18c1da141b213cd35ee32753ad 693 PRINTS PR01159 DNA gyrase subunit B signature 361 377 7.0E-28 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMIS_64510 78f0cb18c1da141b213cd35ee32753ad 693 PRINTS PR01159 DNA gyrase subunit B signature 224 237 7.0E-28 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMIS_64510 78f0cb18c1da141b213cd35ee32753ad 693 PRINTS PR01159 DNA gyrase subunit B signature 521 530 7.0E-28 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMIS_64510 78f0cb18c1da141b213cd35ee32753ad 693 PRINTS PR01159 DNA gyrase subunit B signature 209 224 7.0E-28 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMIS_64510 78f0cb18c1da141b213cd35ee32753ad 693 PRINTS PR01159 DNA gyrase subunit B signature 425 445 7.0E-28 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMIS_64510 78f0cb18c1da141b213cd35ee32753ad 693 PRINTS PR01159 DNA gyrase subunit B signature 644 656 7.0E-28 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMIS_64510 78f0cb18c1da141b213cd35ee32753ad 693 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 623 679 2.5E-23 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMIS_64510 78f0cb18c1da141b213cd35ee32753ad 693 ProSitePatterns PS00177 DNA topoisomerase II signature. 473 481 - T 14-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AMIS_64510 78f0cb18c1da141b213cd35ee32753ad 693 PRINTS PR00418 DNA topoisomerase II family signature 575 587 2.1E-56 T 14-10-2018 AMIS_64510 78f0cb18c1da141b213cd35ee32753ad 693 PRINTS PR00418 DNA topoisomerase II family signature 124 138 2.1E-56 T 14-10-2018 AMIS_64510 78f0cb18c1da141b213cd35ee32753ad 693 PRINTS PR00418 DNA topoisomerase II family signature 81 94 2.1E-56 T 14-10-2018 AMIS_64510 78f0cb18c1da141b213cd35ee32753ad 693 PRINTS PR00418 DNA topoisomerase II family signature 537 553 2.1E-56 T 14-10-2018 AMIS_64510 78f0cb18c1da141b213cd35ee32753ad 693 PRINTS PR00418 DNA topoisomerase II family signature 46 61 2.1E-56 T 14-10-2018 AMIS_64510 78f0cb18c1da141b213cd35ee32753ad 693 PRINTS PR00418 DNA topoisomerase II family signature 623 639 2.1E-56 T 14-10-2018 AMIS_64510 78f0cb18c1da141b213cd35ee32753ad 693 PRINTS PR00418 DNA topoisomerase II family signature 555 572 2.1E-56 T 14-10-2018 AMIS_64510 78f0cb18c1da141b213cd35ee32753ad 693 PRINTS PR00418 DNA topoisomerase II family signature 471 485 2.1E-56 T 14-10-2018 AMIS_64510 78f0cb18c1da141b213cd35ee32753ad 693 PRINTS PR00418 DNA topoisomerase II family signature 316 329 2.1E-56 T 14-10-2018 AMIS_64510 78f0cb18c1da141b213cd35ee32753ad 693 SUPERFAMILY SSF56719 445 684 1.1E-74 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AMIS_64510 78f0cb18c1da141b213cd35ee32753ad 693 SUPERFAMILY SSF54211 253 441 2.66E-31 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMIS_21900 ce5f31b8c433b8b11553bc586bc16904 809 Gene3D G3DSA:2.70.98.40 2 705 0.0 T 14-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily AMIS_21900 ce5f31b8c433b8b11553bc586bc16904 809 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 312 740 1.4E-163 T 14-10-2018 IPR033432 Glycosyl hydrolase 36, catalytic domain AMIS_21900 ce5f31b8c433b8b11553bc586bc16904 809 SUPERFAMILY SSF74650 2 269 1.54E-78 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 AMIS_21900 ce5f31b8c433b8b11553bc586bc16904 809 Gene3D G3DSA:2.60.420.10 320 796 0.0 T 14-10-2018 AMIS_21900 ce5f31b8c433b8b11553bc586bc16904 809 SMART SM01068 1 63 2.5E-18 T 14-10-2018 IPR009342 Putative carbohydrate binding domain AMIS_21900 ce5f31b8c433b8b11553bc586bc16904 809 Gene3D G3DSA:1.50.10.10 327 740 0.0 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 AMIS_21900 ce5f31b8c433b8b11553bc586bc16904 809 SUPERFAMILY SSF48208 291 805 9.83E-93 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AMIS_21900 ce5f31b8c433b8b11553bc586bc16904 809 Gene3D G3DSA:1.20.890.20 270 319 0.0 T 14-10-2018 AMIS_21900 ce5f31b8c433b8b11553bc586bc16904 809 Pfam PF06165 Glycosyltransferase family 36 21 266 3.3E-84 T 14-10-2018 IPR010383 Glycosyl hydrolase 94 AMIS_24630 566b119d90e06347ea8b8226d548a092 227 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 32 227 5.6E-48 T 14-10-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 AMIS_24630 566b119d90e06347ea8b8226d548a092 227 Gene3D G3DSA:3.20.20.70 2 227 8.5E-77 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_24630 566b119d90e06347ea8b8226d548a092 227 SUPERFAMILY SSF51366 10 225 1.06E-46 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AMIS_53710 e06dea97f68d07c81a608a19bdf44791 215 Gene3D G3DSA:3.40.50.1000 2 186 3.7E-48 T 14-10-2018 IPR023214 HAD superfamily AMIS_53710 e06dea97f68d07c81a608a19bdf44791 215 Pfam PF13419 Haloacid dehalogenase-like hydrolase 4 183 3.5E-25 T 14-10-2018 AMIS_53710 e06dea97f68d07c81a608a19bdf44791 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 145 165 5.1E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMIS_53710 e06dea97f68d07c81a608a19bdf44791 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 1 12 5.1E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMIS_53710 e06dea97f68d07c81a608a19bdf44791 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 127 143 5.1E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMIS_53710 e06dea97f68d07c81a608a19bdf44791 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 97 110 5.1E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMIS_53710 e06dea97f68d07c81a608a19bdf44791 215 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 73 181 2.0E-15 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMIS_53710 e06dea97f68d07c81a608a19bdf44791 215 Gene3D G3DSA:1.10.150.240 14 84 3.7E-48 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AMIS_53710 e06dea97f68d07c81a608a19bdf44791 215 SUPERFAMILY SSF56784 2 186 1.9E-46 T 14-10-2018 IPR036412 HAD-like superfamily AMIS_70350 3040e88e3453512db96769310f402ce5 205 Pfam PF05685 Putative restriction endonuclease 27 168 1.1E-24 T 14-10-2018 IPR008538 Domain of unknown function DUF820 AMIS_70350 3040e88e3453512db96769310f402ce5 205 Gene3D G3DSA:3.90.1570.10 18 188 4.8E-22 T 14-10-2018 AMIS_70350 3040e88e3453512db96769310f402ce5 205 SUPERFAMILY SSF52980 21 187 4.66E-22 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AMIS_33630 bd6fe2aa7b98e4d536fdcf241059bbd3 214 SUPERFAMILY SSF52172 2 160 4.13E-16 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_33630 bd6fe2aa7b98e4d536fdcf241059bbd3 214 SMART SM00448 1 117 0.0052 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_33630 bd6fe2aa7b98e4d536fdcf241059bbd3 214 Gene3D G3DSA:3.40.50.2300 1 96 2.8E-13 T 14-10-2018 AMIS_33630 bd6fe2aa7b98e4d536fdcf241059bbd3 214 Gene3D G3DSA:1.10.10.10 100 213 1.1E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_33630 bd6fe2aa7b98e4d536fdcf241059bbd3 214 SMART SM00421 145 204 2.2E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_33630 bd6fe2aa7b98e4d536fdcf241059bbd3 214 Pfam PF00072 Response regulator receiver domain 2 96 4.3E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_33630 bd6fe2aa7b98e4d536fdcf241059bbd3 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 192 1.2E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_33630 bd6fe2aa7b98e4d536fdcf241059bbd3 214 SUPERFAMILY SSF46894 130 193 1.09E-16 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_33630 bd6fe2aa7b98e4d536fdcf241059bbd3 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 5.4E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_33630 bd6fe2aa7b98e4d536fdcf241059bbd3 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 5.4E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_33630 bd6fe2aa7b98e4d536fdcf241059bbd3 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 5.4E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_17550 2b619ee9a2eeda01d4fec6afbf891443 182 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 58 5.8E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_17550 2b619ee9a2eeda01d4fec6afbf891443 182 Gene3D G3DSA:1.10.357.10 4 181 7.6E-42 T 14-10-2018 AMIS_17550 2b619ee9a2eeda01d4fec6afbf891443 182 SUPERFAMILY SSF46689 3 65 8.72E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_17550 2b619ee9a2eeda01d4fec6afbf891443 182 SUPERFAMILY SSF48498 75 180 3.38E-13 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_7040 e7d009db170863f502c74aa0a88e0e55 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 192 204 1.7E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_7040 e7d009db170863f502c74aa0a88e0e55 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 192 1.7E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_7040 e7d009db170863f502c74aa0a88e0e55 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 176 1.7E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_7040 e7d009db170863f502c74aa0a88e0e55 222 Pfam PF00072 Response regulator receiver domain 15 125 7.2E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_7040 e7d009db170863f502c74aa0a88e0e55 222 ProSitePatterns PS00622 LuxR-type HTH domain signature. 176 203 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_7040 e7d009db170863f502c74aa0a88e0e55 222 SUPERFAMILY SSF46894 152 221 8.84E-24 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_7040 e7d009db170863f502c74aa0a88e0e55 222 SUPERFAMILY SSF52172 12 142 4.7E-31 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_7040 e7d009db170863f502c74aa0a88e0e55 222 Gene3D G3DSA:3.40.50.12740 13 222 7.4E-63 T 14-10-2018 AMIS_7040 e7d009db170863f502c74aa0a88e0e55 222 Pfam PF00196 Bacterial regulatory proteins, luxR family 161 216 3.6E-21 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_7040 e7d009db170863f502c74aa0a88e0e55 222 SMART SM00421 159 216 7.4E-27 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_7040 e7d009db170863f502c74aa0a88e0e55 222 SMART SM00448 13 124 2.5E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_66490 42348cd0b65c2f70a9ec8b0656805226 772 Gene3D G3DSA:3.50.50.60 6 376 1.7E-121 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_66490 42348cd0b65c2f70a9ec8b0656805226 772 SUPERFAMILY SSF103025 409 674 3.45E-65 T 14-10-2018 AMIS_66490 42348cd0b65c2f70a9ec8b0656805226 772 Pfam PF01266 FAD dependent oxidoreductase 5 357 2.2E-43 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AMIS_66490 42348cd0b65c2f70a9ec8b0656805226 772 SUPERFAMILY SSF101790 685 771 5.07E-19 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal AMIS_66490 42348cd0b65c2f70a9ec8b0656805226 772 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 667 759 2.3E-11 T 14-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AMIS_66490 42348cd0b65c2f70a9ec8b0656805226 772 SUPERFAMILY SSF51905 4 401 7.96E-54 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_66490 42348cd0b65c2f70a9ec8b0656805226 772 Pfam PF16350 FAD dependent oxidoreductase central domain 360 414 5.9E-15 T 14-10-2018 IPR032503 FAD dependent oxidoreductase, central domain AMIS_66490 42348cd0b65c2f70a9ec8b0656805226 772 Gene3D G3DSA:2.40.30.110 682 759 7.2E-28 T 14-10-2018 AMIS_66490 42348cd0b65c2f70a9ec8b0656805226 772 Gene3D G3DSA:3.30.70.1400 482 674 2.8E-73 T 14-10-2018 AMIS_66490 42348cd0b65c2f70a9ec8b0656805226 772 Gene3D G3DSA:3.30.1360.120 409 661 2.8E-73 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 AMIS_66490 42348cd0b65c2f70a9ec8b0656805226 772 Gene3D G3DSA:3.30.9.10 80 320 1.7E-121 T 14-10-2018 AMIS_66490 42348cd0b65c2f70a9ec8b0656805226 772 Pfam PF01571 Aminomethyltransferase folate-binding domain 417 670 4.4E-54 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain AMIS_66490 42348cd0b65c2f70a9ec8b0656805226 772 SUPERFAMILY SSF54373 214 319 1.84E-18 T 14-10-2018 AMIS_60270 3b20f7786b6459b0ff9f2df88fb912e5 538 Pfam PF02384 N-6 DNA Methylase 133 346 2.7E-33 T 14-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 AMIS_60270 3b20f7786b6459b0ff9f2df88fb912e5 538 SUPERFAMILY SSF53335 73 388 1.33E-46 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_60270 3b20f7786b6459b0ff9f2df88fb912e5 538 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 224 236 1.8E-8 T 14-10-2018 AMIS_60270 3b20f7786b6459b0ff9f2df88fb912e5 538 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 258 282 1.8E-8 T 14-10-2018 AMIS_60270 3b20f7786b6459b0ff9f2df88fb912e5 538 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 160 174 1.8E-8 T 14-10-2018 AMIS_60270 3b20f7786b6459b0ff9f2df88fb912e5 538 Gene3D G3DSA:3.40.50.150 123 363 2.3E-44 T 14-10-2018 AMIS_65960 17a533bbbcdaf23956124d0431037ff1 957 Gene3D G3DSA:3.40.50.11290 674 722 2.1E-9 T 14-10-2018 AMIS_65960 17a533bbbcdaf23956124d0431037ff1 957 Gene3D G3DSA:3.30.1490.270 832 891 1.7E-18 T 14-10-2018 AMIS_65960 17a533bbbcdaf23956124d0431037ff1 957 SUPERFAMILY SSF55931 23 276 1.08E-74 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AMIS_65960 17a533bbbcdaf23956124d0431037ff1 957 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 29 281 1.6E-51 T 14-10-2018 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AMIS_65960 17a533bbbcdaf23956124d0431037ff1 957 Gene3D G3DSA:3.30.590.20 327 440 5.6E-19 T 14-10-2018 AMIS_65960 17a533bbbcdaf23956124d0431037ff1 957 Gene3D G3DSA:3.30.590.20 21 293 7.3E-85 T 14-10-2018 AMIS_65960 17a533bbbcdaf23956124d0431037ff1 957 Pfam PF14403 Circularly permuted ATP-grasp type 2 748 935 1.1E-61 T 14-10-2018 IPR025841 Circularly permuted ATP-grasp type 2 AMIS_65960 17a533bbbcdaf23956124d0431037ff1 957 Pfam PF14403 Circularly permuted ATP-grasp type 2 535 718 1.5E-56 T 14-10-2018 IPR025841 Circularly permuted ATP-grasp type 2 AMIS_65960 17a533bbbcdaf23956124d0431037ff1 957 SUPERFAMILY SSF55931 333 438 2.55E-13 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AMIS_65960 17a533bbbcdaf23956124d0431037ff1 957 TIGRFAM TIGR02050 gshA_cyan_rel: carboxylate-amine ligase, YbdK family 28 286 9.3E-77 T 14-10-2018 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AMIS_65960 17a533bbbcdaf23956124d0431037ff1 957 Hamap MF_01609 Glutamate--cysteine ligase [gshA]. 1 485 65.636 T 14-10-2018 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AMIS_65960 17a533bbbcdaf23956124d0431037ff1 957 SUPERFAMILY SSF56059 509 948 1.01E-39 T 14-10-2018 AMIS_54240 d832a374332f35570f3b6b4fce92684b 379 TIGRFAM TIGR02980 SigBFG: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 38 259 7.6E-75 T 14-10-2018 IPR014322 RNA polymerase sigma-B/F/G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_54240 d832a374332f35570f3b6b4fce92684b 379 Pfam PF04539 Sigma-70 region 3 127 193 9.6E-9 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 AMIS_54240 d832a374332f35570f3b6b4fce92684b 379 Gene3D G3DSA:1.10.10.10 113 165 2.8E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_54240 d832a374332f35570f3b6b4fce92684b 379 Pfam PF13466 STAS domain 293 373 1.7E-16 T 14-10-2018 IPR002645 STAS domain AMIS_54240 d832a374332f35570f3b6b4fce92684b 379 SUPERFAMILY SSF88659 183 261 3.36E-16 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_54240 d832a374332f35570f3b6b4fce92684b 379 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 40 259 2.1E-33 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_54240 d832a374332f35570f3b6b4fce92684b 379 Gene3D G3DSA:3.30.750.24 276 379 3.4E-20 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_54240 d832a374332f35570f3b6b4fce92684b 379 SUPERFAMILY SSF52091 280 376 1.69E-17 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_54240 d832a374332f35570f3b6b4fce92684b 379 Pfam PF04545 Sigma-70, region 4 209 257 7.9E-16 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 AMIS_54240 d832a374332f35570f3b6b4fce92684b 379 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 280 377 1.3E-15 T 14-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 AMIS_54240 d832a374332f35570f3b6b4fce92684b 379 SUPERFAMILY SSF88946 35 112 3.92E-22 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_54240 d832a374332f35570f3b6b4fce92684b 379 Gene3D G3DSA:1.10.10.10 189 261 1.8E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_54240 d832a374332f35570f3b6b4fce92684b 379 SUPERFAMILY SSF88659 116 191 5.67E-11 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_54240 d832a374332f35570f3b6b4fce92684b 379 Gene3D G3DSA:1.20.120.1810 2 111 2.9E-14 T 14-10-2018 AMIS_54240 d832a374332f35570f3b6b4fce92684b 379 PRINTS PR00046 Major sigma-70 factor signature 68 81 2.7E-6 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMIS_54240 d832a374332f35570f3b6b4fce92684b 379 PRINTS PR00046 Major sigma-70 factor signature 229 244 2.7E-6 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMIS_54240 d832a374332f35570f3b6b4fce92684b 379 PRINTS PR00046 Major sigma-70 factor signature 212 224 2.7E-6 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMIS_54240 d832a374332f35570f3b6b4fce92684b 379 Pfam PF04542 Sigma-70 region 2 44 112 8.9E-17 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_74630 94d2a74d3fef7a01e23d9e55d9fe927d 648 Gene3D G3DSA:3.40.1000.10 512 648 2.4E-6 T 14-10-2018 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich AMIS_74630 94d2a74d3fef7a01e23d9e55d9fe927d 648 SUPERFAMILY SSF56112 25 336 6.61E-66 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMIS_74630 94d2a74d3fef7a01e23d9e55d9fe927d 648 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 156 168 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 AMIS_74630 94d2a74d3fef7a01e23d9e55d9fe927d 648 Pfam PF00069 Protein kinase domain 34 281 6.2E-41 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMIS_74630 94d2a74d3fef7a01e23d9e55d9fe927d 648 Gene3D G3DSA:1.10.510.10 117 301 5.0E-39 T 14-10-2018 AMIS_74630 94d2a74d3fef7a01e23d9e55d9fe927d 648 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 39 62 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 AMIS_74630 94d2a74d3fef7a01e23d9e55d9fe927d 648 Gene3D G3DSA:3.30.200.20 22 116 4.9E-29 T 14-10-2018 AMIS_74630 94d2a74d3fef7a01e23d9e55d9fe927d 648 SMART SM00220 33 292 1.5E-55 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMIS_76790 316cfbd14a1c285b2ab33ff4848f21b1 647 SMART SM00491 484 613 1.1E-31 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AMIS_76790 316cfbd14a1c285b2ab33ff4848f21b1 647 Pfam PF13307 Helicase C-terminal domain 466 627 1.4E-29 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AMIS_76790 316cfbd14a1c285b2ab33ff4848f21b1 647 Gene3D G3DSA:3.40.50.300 455 638 1.5E-30 T 14-10-2018 AMIS_76790 316cfbd14a1c285b2ab33ff4848f21b1 647 SMART SM00487 2 330 0.0029 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMIS_76790 316cfbd14a1c285b2ab33ff4848f21b1 647 Gene3D G3DSA:3.40.50.300 5 281 1.5E-42 T 14-10-2018 AMIS_76790 316cfbd14a1c285b2ab33ff4848f21b1 647 SUPERFAMILY SSF52540 18 607 1.37E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_68430 aaa1ddb7fc91b85faef8975d314acd78 284 SUPERFAMILY SSF51735 122 281 2.07E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_68430 aaa1ddb7fc91b85faef8975d314acd78 284 Gene3D G3DSA:3.40.50.10860 8 277 1.7E-92 T 14-10-2018 AMIS_68430 aaa1ddb7fc91b85faef8975d314acd78 284 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 123 282 3.1E-48 T 14-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AMIS_68430 aaa1ddb7fc91b85faef8975d314acd78 284 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 6 120 1.6E-33 T 14-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AMIS_68430 aaa1ddb7fc91b85faef8975d314acd78 284 Gene3D G3DSA:3.40.50.720 139 260 1.7E-92 T 14-10-2018 AMIS_68430 aaa1ddb7fc91b85faef8975d314acd78 284 SUPERFAMILY SSF53223 1 121 6.14E-34 T 14-10-2018 AMIS_68430 aaa1ddb7fc91b85faef8975d314acd78 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 207 236 2.2E-61 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AMIS_68430 aaa1ddb7fc91b85faef8975d314acd78 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 257 275 2.2E-61 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AMIS_68430 aaa1ddb7fc91b85faef8975d314acd78 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 154 174 2.2E-61 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AMIS_68430 aaa1ddb7fc91b85faef8975d314acd78 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 33 55 2.2E-61 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AMIS_68430 aaa1ddb7fc91b85faef8975d314acd78 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 109 130 2.2E-61 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AMIS_68430 aaa1ddb7fc91b85faef8975d314acd78 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 74 101 2.2E-61 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AMIS_68430 aaa1ddb7fc91b85faef8975d314acd78 284 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 284 32.503 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AMIS_47150 8a0aaba048d4cb65b46e4cd5fff44361 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 11 29 - T 14-10-2018 AMIS_47150 8a0aaba048d4cb65b46e4cd5fff44361 335 SMART SM00354 8 77 1.6E-19 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_47150 8a0aaba048d4cb65b46e4cd5fff44361 335 SUPERFAMILY SSF53822 68 330 3.34E-48 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_47150 8a0aaba048d4cb65b46e4cd5fff44361 335 Gene3D G3DSA:3.40.50.2300 75 316 4.9E-52 T 14-10-2018 AMIS_47150 8a0aaba048d4cb65b46e4cd5fff44361 335 SUPERFAMILY SSF47413 9 63 5.09E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_47150 8a0aaba048d4cb65b46e4cd5fff44361 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 10 55 7.9E-17 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_47150 8a0aaba048d4cb65b46e4cd5fff44361 335 Pfam PF13377 Periplasmic binding protein-like domain 171 329 1.8E-22 T 14-10-2018 AMIS_47150 8a0aaba048d4cb65b46e4cd5fff44361 335 Gene3D G3DSA:3.40.50.2300 163 290 4.9E-52 T 14-10-2018 AMIS_47150 8a0aaba048d4cb65b46e4cd5fff44361 335 Gene3D G3DSA:1.10.260.40 1 65 3.5E-21 T 14-10-2018 AMIS_80990 13fe65c38a88ff2c4696927b64cddd4b 368 Gene3D G3DSA:3.30.360.10 199 308 1.8E-148 T 14-10-2018 AMIS_80990 13fe65c38a88ff2c4696927b64cddd4b 368 SUPERFAMILY SSF55347 198 308 8.24E-35 T 14-10-2018 AMIS_80990 13fe65c38a88ff2c4696927b64cddd4b 368 Pfam PF01658 Myo-inositol-1-phosphate synthase 200 308 1.1E-30 T 14-10-2018 IPR013021 Myo-inositol-1-phosphate synthase, GAPDH-like KEGG: 00521+5.5.1.4|KEGG: 00562+5.5.1.4|MetaCyc: PWY-2301|MetaCyc: PWY-4661|MetaCyc: PWY-6372|MetaCyc: PWY-6580|MetaCyc: PWY-6664|Reactome: R-HSA-1855183 AMIS_80990 13fe65c38a88ff2c4696927b64cddd4b 368 Gene3D G3DSA:3.40.50.720 13 361 1.8E-148 T 14-10-2018 AMIS_80990 13fe65c38a88ff2c4696927b64cddd4b 368 TIGRFAM TIGR03450 mycothiol_INO1: inositol 1-phosphate synthase 13 362 8.1E-201 T 14-10-2018 IPR017815 Myo-inositol 1-phosphate synthase, actinobacteria AMIS_80990 13fe65c38a88ff2c4696927b64cddd4b 368 PIRSF PIRSF015578 2 368 7.0E-94 T 14-10-2018 IPR002587 Myo-inositol-1-phosphate synthase GO:0004512|GO:0006021|GO:0008654 KEGG: 00521+5.5.1.4|KEGG: 00562+5.5.1.4|MetaCyc: PWY-2301|MetaCyc: PWY-4661|MetaCyc: PWY-6372|MetaCyc: PWY-6580|MetaCyc: PWY-6664|Reactome: R-HSA-1855183 AMIS_80990 13fe65c38a88ff2c4696927b64cddd4b 368 SUPERFAMILY SSF51735 12 364 1.58E-95 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_77210 eef4ca00d1a717a13b55215f2ee30edc 240 Gene3D G3DSA:1.20.144.10 121 223 1.1E-11 T 14-10-2018 AMIS_77210 eef4ca00d1a717a13b55215f2ee30edc 240 SUPERFAMILY SSF48317 17 225 5.23E-23 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily AMIS_77210 eef4ca00d1a717a13b55215f2ee30edc 240 Pfam PF01569 PAP2 superfamily 93 219 4.2E-14 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMIS_2130 a690d97cab5f3993015972ecdd98fb29 286 Pfam PF00296 Luciferase-like monooxygenase 13 236 2.9E-37 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMIS_2130 a690d97cab5f3993015972ecdd98fb29 286 Gene3D G3DSA:3.20.20.30 3 284 9.4E-56 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_2130 a690d97cab5f3993015972ecdd98fb29 286 SUPERFAMILY SSF51679 4 275 8.54E-45 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_79270 c8618871abec1d4ed86aa93476437c17 110 Gene3D G3DSA:1.10.1660.10 11 86 3.1E-14 T 14-10-2018 AMIS_79270 c8618871abec1d4ed86aa93476437c17 110 Pfam PF13411 MerR HTH family regulatory protein 18 81 7.1E-10 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_79270 c8618871abec1d4ed86aa93476437c17 110 SUPERFAMILY SSF46955 18 96 3.57E-12 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily AMIS_79270 c8618871abec1d4ed86aa93476437c17 110 SMART SM00422 18 86 2.9E-6 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_79650 aef6b941fada4b053731b69db220388a 466 Gene3D G3DSA:3.40.50.300 134 290 1.2E-25 T 14-10-2018 AMIS_79650 aef6b941fada4b053731b69db220388a 466 Pfam PF00931 NB-ARC domain 170 397 1.1E-13 T 14-10-2018 IPR002182 NB-ARC GO:0043531 Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-6798695|Reactome: R-HSA-6803207|Reactome: R-HSA-8953750 AMIS_79650 aef6b941fada4b053731b69db220388a 466 Pfam PF13560 Helix-turn-helix domain 37 95 1.0E-13 T 14-10-2018 AMIS_79650 aef6b941fada4b053731b69db220388a 466 PRINTS PR00364 Disease resistance protein signature 247 261 3.4E-12 T 14-10-2018 AMIS_79650 aef6b941fada4b053731b69db220388a 466 PRINTS PR00364 Disease resistance protein signature 170 185 3.4E-12 T 14-10-2018 AMIS_79650 aef6b941fada4b053731b69db220388a 466 PRINTS PR00364 Disease resistance protein signature 328 342 3.4E-12 T 14-10-2018 AMIS_79650 aef6b941fada4b053731b69db220388a 466 SUPERFAMILY SSF52540 137 395 1.11E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_79650 aef6b941fada4b053731b69db220388a 466 SMART SM00530 40 96 3.2E-10 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMIS_79650 aef6b941fada4b053731b69db220388a 466 Gene3D G3DSA:1.10.260.40 31 98 3.3E-13 T 14-10-2018 AMIS_79650 aef6b941fada4b053731b69db220388a 466 SUPERFAMILY SSF47413 33 92 7.51E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_9580 2744350b93e3be2cccb007e65827aed6 316 SUPERFAMILY SSF50685 26 148 1.88E-23 T 14-10-2018 IPR036908 RlpA-like domain superfamily AMIS_9580 2744350b93e3be2cccb007e65827aed6 316 Gene3D G3DSA:2.60.40.760 127 216 3.1E-23 T 14-10-2018 IPR036749 Expansin, cellulose-binding-like domain superfamily AMIS_9580 2744350b93e3be2cccb007e65827aed6 316 SUPERFAMILY SSF49590 129 205 6.15E-10 T 14-10-2018 IPR036749 Expansin, cellulose-binding-like domain superfamily AMIS_9580 2744350b93e3be2cccb007e65827aed6 316 Gene3D G3DSA:2.40.40.10 24 124 2.4E-27 T 14-10-2018 IPR036908 RlpA-like domain superfamily AMIS_9580 2744350b93e3be2cccb007e65827aed6 316 Pfam PF03330 Lytic transglycolase 68 119 1.3E-7 T 14-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain AMIS_3410 1b7387fca84462116f251485754266c8 116 SUPERFAMILY SSF56349 21 86 9.42E-19 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMIS_3410 1b7387fca84462116f251485754266c8 116 Gene3D G3DSA:1.10.443.10 2 89 8.0E-21 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AMIS_3410 1b7387fca84462116f251485754266c8 116 Pfam PF00589 Phage integrase family 24 74 1.7E-11 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMIS_41960 9ef6e436aae2e1ef168e34a9e4a2401e 162 Hamap MF_00163 Peptide deformylase [def]. 2 159 24.903 T 14-10-2018 IPR023635 Peptide deformylase AMIS_41960 9ef6e436aae2e1ef168e34a9e4a2401e 162 PRINTS PR01576 Peptide deformylase signature 33 62 1.7E-24 T 14-10-2018 IPR023635 Peptide deformylase AMIS_41960 9ef6e436aae2e1ef168e34a9e4a2401e 162 PRINTS PR01576 Peptide deformylase signature 86 97 1.7E-24 T 14-10-2018 IPR023635 Peptide deformylase AMIS_41960 9ef6e436aae2e1ef168e34a9e4a2401e 162 PRINTS PR01576 Peptide deformylase signature 98 116 1.7E-24 T 14-10-2018 IPR023635 Peptide deformylase AMIS_41960 9ef6e436aae2e1ef168e34a9e4a2401e 162 PRINTS PR01576 Peptide deformylase signature 117 146 1.7E-24 T 14-10-2018 IPR023635 Peptide deformylase AMIS_41960 9ef6e436aae2e1ef168e34a9e4a2401e 162 PIRSF PIRSF004749 1 160 2.6E-38 T 14-10-2018 IPR023635 Peptide deformylase AMIS_41960 9ef6e436aae2e1ef168e34a9e4a2401e 162 Pfam PF01327 Polypeptide deformylase 4 145 1.9E-35 T 14-10-2018 IPR023635 Peptide deformylase AMIS_41960 9ef6e436aae2e1ef168e34a9e4a2401e 162 SUPERFAMILY SSF56420 3 158 1.7E-47 T 14-10-2018 IPR036821 Peptide deformylase superfamily AMIS_41960 9ef6e436aae2e1ef168e34a9e4a2401e 162 Gene3D G3DSA:3.90.45.10 1 161 6.1E-46 T 14-10-2018 IPR036821 Peptide deformylase superfamily AMIS_13270 65b6cdf341d9185a11ab6cba062ef75e 282 SUPERFAMILY SSF102705 2 265 3.66E-82 T 14-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily AMIS_13270 65b6cdf341d9185a11ab6cba062ef75e 282 Gene3D G3DSA:3.40.1390.30 6 242 5.6E-66 T 14-10-2018 AMIS_13270 65b6cdf341d9185a11ab6cba062ef75e 282 Gene3D G3DSA:3.40.1390.30 100 229 5.6E-66 T 14-10-2018 AMIS_13270 65b6cdf341d9185a11ab6cba062ef75e 282 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 6 250 6.6E-74 T 14-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 AMIS_13270 65b6cdf341d9185a11ab6cba062ef75e 282 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 2 262 5.1E-54 T 14-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 AMIS_52530 32179d9b66dfd4ed19dc4a4b595d5070 295 Pfam PF00892 EamA-like transporter family 4 134 5.3E-16 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMIS_52530 32179d9b66dfd4ed19dc4a4b595d5070 295 Pfam PF00892 EamA-like transporter family 147 278 3.6E-22 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMIS_52530 32179d9b66dfd4ed19dc4a4b595d5070 295 SUPERFAMILY SSF103481 183 281 9.15E-16 T 14-10-2018 AMIS_52530 32179d9b66dfd4ed19dc4a4b595d5070 295 SUPERFAMILY SSF103481 39 135 9.15E-9 T 14-10-2018 AMIS_52240 68b9e6ec21ea41963746c3d011aecd43 331 Gene3D G3DSA:3.40.50.2300 74 314 2.8E-71 T 14-10-2018 AMIS_52240 68b9e6ec21ea41963746c3d011aecd43 331 Gene3D G3DSA:1.10.260.40 1 54 4.6E-25 T 14-10-2018 AMIS_52240 68b9e6ec21ea41963746c3d011aecd43 331 SMART SM00354 1 68 2.7E-30 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_52240 68b9e6ec21ea41963746c3d011aecd43 331 Gene3D G3DSA:3.40.50.2300 156 318 2.8E-71 T 14-10-2018 AMIS_52240 68b9e6ec21ea41963746c3d011aecd43 331 SUPERFAMILY SSF53822 58 326 8.25E-60 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_52240 68b9e6ec21ea41963746c3d011aecd43 331 ProSitePatterns PS00356 LacI-type HTH domain signature. 1 19 - T 14-10-2018 AMIS_52240 68b9e6ec21ea41963746c3d011aecd43 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 1 45 4.9E-21 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_52240 68b9e6ec21ea41963746c3d011aecd43 331 Pfam PF13377 Periplasmic binding protein-like domain 165 323 1.8E-36 T 14-10-2018 AMIS_52240 68b9e6ec21ea41963746c3d011aecd43 331 SUPERFAMILY SSF47413 1 56 3.63E-19 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_59180 75d2ffead8bf3fca849822a6b2adafab 258 Gene3D G3DSA:3.40.50.720 1 257 6.8E-65 T 14-10-2018 AMIS_59180 75d2ffead8bf3fca849822a6b2adafab 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 1.0E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_59180 75d2ffead8bf3fca849822a6b2adafab 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 187 1.0E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_59180 75d2ffead8bf3fca849822a6b2adafab 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 189 206 1.0E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_59180 75d2ffead8bf3fca849822a6b2adafab 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 1.0E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_59180 75d2ffead8bf3fca849822a6b2adafab 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 93 104 1.0E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_59180 75d2ffead8bf3fca849822a6b2adafab 258 SUPERFAMILY SSF51735 8 256 9.93E-61 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_59180 75d2ffead8bf3fca849822a6b2adafab 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 21 256 4.2E-44 T 14-10-2018 AMIS_62540 34fd050ed2e93cf3214b951262b3558d 526 Gene3D G3DSA:3.30.200.20 1 90 3.0E-29 T 14-10-2018 AMIS_62540 34fd050ed2e93cf3214b951262b3558d 526 SUPERFAMILY SSF56112 9 263 3.51E-71 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMIS_62540 34fd050ed2e93cf3214b951262b3558d 526 Pfam PF00069 Protein kinase domain 13 260 5.4E-44 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMIS_62540 34fd050ed2e93cf3214b951262b3558d 526 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 131 143 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 AMIS_62540 34fd050ed2e93cf3214b951262b3558d 526 SMART SM00220 12 269 7.4E-53 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMIS_62540 34fd050ed2e93cf3214b951262b3558d 526 Gene3D G3DSA:1.10.510.10 93 273 4.9E-48 T 14-10-2018 AMIS_9970 1c1d71c10e77932664e7b97820d9e91d 575 Pfam PF03442 Carbohydrate binding domain X2 381 464 2.8E-13 T 14-10-2018 IPR005102 Carbohydrate binding X2 domain AMIS_9970 1c1d71c10e77932664e7b97820d9e91d 575 PIRSF PIRSF001043 17 569 1.2E-165 T 14-10-2018 IPR016282 Glycoside hydrolase, family 5, endoglucanase B GO:0016798 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AMIS_9970 1c1d71c10e77932664e7b97820d9e91d 575 Gene3D G3DSA:3.20.20.80 48 374 1.7E-88 T 14-10-2018 AMIS_9970 1c1d71c10e77932664e7b97820d9e91d 575 SUPERFAMILY SSF51445 43 362 1.78E-59 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_9970 1c1d71c10e77932664e7b97820d9e91d 575 SUPERFAMILY SSF81296 377 472 1.36E-6 T 14-10-2018 IPR014756 Immunoglobulin E-set AMIS_9970 1c1d71c10e77932664e7b97820d9e91d 575 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 77 350 3.9E-45 T 14-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 AMIS_79420 6cebd703c7bf3f2a4a186be490abbe64 264 Pfam PF00106 short chain dehydrogenase 9 194 3.6E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_79420 6cebd703c7bf3f2a4a186be490abbe64 264 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMIS_79420 6cebd703c7bf3f2a4a186be490abbe64 264 SUPERFAMILY SSF51735 1 259 1.22E-62 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_79420 6cebd703c7bf3f2a4a186be490abbe64 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 3.5E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_79420 6cebd703c7bf3f2a4a186be490abbe64 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 242 3.5E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_79420 6cebd703c7bf3f2a4a186be490abbe64 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 3.5E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_79420 6cebd703c7bf3f2a4a186be490abbe64 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 3.5E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_79420 6cebd703c7bf3f2a4a186be490abbe64 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 3.5E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_79420 6cebd703c7bf3f2a4a186be490abbe64 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 3.5E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_79420 6cebd703c7bf3f2a4a186be490abbe64 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.8E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_79420 6cebd703c7bf3f2a4a186be490abbe64 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 1.8E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_79420 6cebd703c7bf3f2a4a186be490abbe64 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 1.8E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_79420 6cebd703c7bf3f2a4a186be490abbe64 264 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 189 0.0016 T 14-10-2018 AMIS_79420 6cebd703c7bf3f2a4a186be490abbe64 264 Gene3D G3DSA:3.40.50.720 1 262 1.3E-68 T 14-10-2018 AMIS_72810 65e74b53b46a009b1dcf2e5f8a5d162d 375 SUPERFAMILY SSF53067 134 367 8.97E-81 T 14-10-2018 AMIS_72810 65e74b53b46a009b1dcf2e5f8a5d162d 375 TIGRFAM TIGR00016 ackA: acetate kinase 2 366 1.2E-127 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMIS_72810 65e74b53b46a009b1dcf2e5f8a5d162d 375 Gene3D G3DSA:3.30.420.40 171 369 5.2E-76 T 14-10-2018 AMIS_72810 65e74b53b46a009b1dcf2e5f8a5d162d 375 SUPERFAMILY SSF53067 1 171 5.5E-58 T 14-10-2018 AMIS_72810 65e74b53b46a009b1dcf2e5f8a5d162d 375 Hamap MF_00020 Acetate kinase [ackA]. 1 370 162.274 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMIS_72810 65e74b53b46a009b1dcf2e5f8a5d162d 375 PRINTS PR00471 Acetate kinase family signature 4 15 3.1E-40 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMIS_72810 65e74b53b46a009b1dcf2e5f8a5d162d 375 PRINTS PR00471 Acetate kinase family signature 178 199 3.1E-40 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMIS_72810 65e74b53b46a009b1dcf2e5f8a5d162d 375 PRINTS PR00471 Acetate kinase family signature 274 287 3.1E-40 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMIS_72810 65e74b53b46a009b1dcf2e5f8a5d162d 375 PRINTS PR00471 Acetate kinase family signature 148 161 3.1E-40 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMIS_72810 65e74b53b46a009b1dcf2e5f8a5d162d 375 PRINTS PR00471 Acetate kinase family signature 296 312 3.1E-40 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMIS_72810 65e74b53b46a009b1dcf2e5f8a5d162d 375 PRINTS PR00471 Acetate kinase family signature 348 360 3.1E-40 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMIS_72810 65e74b53b46a009b1dcf2e5f8a5d162d 375 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 178 195 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMIS_72810 65e74b53b46a009b1dcf2e5f8a5d162d 375 PIRSF PIRSF000722 1 371 2.2E-131 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMIS_72810 65e74b53b46a009b1dcf2e5f8a5d162d 375 Gene3D G3DSA:3.30.420.40 1 169 4.1E-64 T 14-10-2018 AMIS_72810 65e74b53b46a009b1dcf2e5f8a5d162d 375 Pfam PF00871 Acetokinase family 4 360 2.1E-130 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AMIS_28470 6a7f5afd3261fd4322882334c1d7b67d 217 SUPERFAMILY SSF82153 83 213 3.92E-9 T 14-10-2018 IPR036378 FAS1 domain superfamily AMIS_28470 6a7f5afd3261fd4322882334c1d7b67d 217 Pfam PF02469 Fasciclin domain 84 213 8.1E-13 T 14-10-2018 IPR000782 FAS1 domain AMIS_28470 6a7f5afd3261fd4322882334c1d7b67d 217 Gene3D G3DSA:2.30.180.10 20 214 3.5E-10 T 14-10-2018 IPR036378 FAS1 domain superfamily AMIS_28470 6a7f5afd3261fd4322882334c1d7b67d 217 SMART SM00554 89 214 8.8E-9 T 14-10-2018 IPR000782 FAS1 domain AMIS_40460 2ab6070fec657f0c28af8326ced71971 809 SUPERFAMILY SSF49785 3 191 8.84E-48 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_40460 2ab6070fec657f0c28af8326ced71971 809 SUPERFAMILY SSF51445 289 633 2.25E-97 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_40460 2ab6070fec657f0c28af8326ced71971 809 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 309 465 6.4E-6 T 14-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 AMIS_40460 2ab6070fec657f0c28af8326ced71971 809 Gene3D G3DSA:3.20.20.80 292 631 1.2E-109 T 14-10-2018 AMIS_40460 2ab6070fec657f0c28af8326ced71971 809 Gene3D G3DSA:2.60.120.260 8 193 5.3E-58 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_40460 2ab6070fec657f0c28af8326ced71971 809 Gene3D G3DSA:2.60.40.10 194 291 4.0E-9 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_40460 2ab6070fec657f0c28af8326ced71971 809 SUPERFAMILY SSF49303 206 292 3.6E-11 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily AMIS_27920 ce7067a3b40d4a94188b9d2d21f6ad20 584 Gene3D G3DSA:3.50.30.80 384 537 3.0E-49 T 14-10-2018 AMIS_27920 ce7067a3b40d4a94188b9d2d21f6ad20 584 SUPERFAMILY SSF52016 384 571 1.41E-56 T 14-10-2018 AMIS_27920 ce7067a3b40d4a94188b9d2d21f6ad20 584 SUPERFAMILY SSF143975 13 381 3.79E-109 T 14-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AMIS_27920 ce7067a3b40d4a94188b9d2d21f6ad20 584 Pfam PF00920 Dehydratase family 49 566 8.7E-169 T 14-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AMIS_27920 ce7067a3b40d4a94188b9d2d21f6ad20 584 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 132 142 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AMIS_41650 e844363c21044280959de6fc6d0bb291 307 Gene3D G3DSA:1.10.10.60 204 263 8.4E-9 T 14-10-2018 AMIS_41650 e844363c21044280959de6fc6d0bb291 307 Gene3D G3DSA:1.10.10.60 264 307 3.9E-12 T 14-10-2018 AMIS_41650 e844363c21044280959de6fc6d0bb291 307 SUPERFAMILY SSF46689 205 254 4.3E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_41650 e844363c21044280959de6fc6d0bb291 307 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 258 300 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AMIS_41650 e844363c21044280959de6fc6d0bb291 307 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 273 288 5.9E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMIS_41650 e844363c21044280959de6fc6d0bb291 307 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 288 304 5.9E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMIS_41650 e844363c21044280959de6fc6d0bb291 307 SUPERFAMILY SSF46689 257 306 1.04E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_41650 e844363c21044280959de6fc6d0bb291 307 Pfam PF12852 Cupin 2 188 6.9E-46 T 14-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain AMIS_41650 e844363c21044280959de6fc6d0bb291 307 Pfam PF12833 Helix-turn-helix domain 227 306 1.7E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMIS_41650 e844363c21044280959de6fc6d0bb291 307 SMART SM00342 221 304 5.7E-27 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMIS_71130 d47dae7956a5dbc6c281c8b81833330e 523 SMART SM00917 377 521 4.7E-40 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AMIS_71130 d47dae7956a5dbc6c281c8b81833330e 523 SUPERFAMILY SSF110921 400 517 2.62E-26 T 14-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AMIS_71130 d47dae7956a5dbc6c281c8b81833330e 523 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 10 26 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AMIS_71130 d47dae7956a5dbc6c281c8b81833330e 523 Gene3D G3DSA:3.30.160.270 398 519 2.0E-10 T 14-10-2018 AMIS_71130 d47dae7956a5dbc6c281c8b81833330e 523 SUPERFAMILY SSF51569 4 295 4.76E-70 T 14-10-2018 AMIS_71130 d47dae7956a5dbc6c281c8b81833330e 523 Gene3D G3DSA:3.20.20.70 3 328 5.3E-96 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_71130 d47dae7956a5dbc6c281c8b81833330e 523 TIGRFAM TIGR00977 citramal_synth: citramalate synthase 4 522 1.9E-181 T 14-10-2018 IPR005675 Citramalate synthase GO:0019752|GO:0046912 KEGG: 00290+2.3.1.182|KEGG: 00660+2.3.1.182|MetaCyc: PWY-5101 AMIS_71130 d47dae7956a5dbc6c281c8b81833330e 523 Pfam PF00682 HMGL-like 4 255 4.2E-41 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 AMIS_71130 d47dae7956a5dbc6c281c8b81833330e 523 Pfam PF08502 LeuA allosteric (dimerisation) domain 377 519 2.6E-29 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AMIS_15930 bc0049eac50ad04a65a1c1be7474e5d5 272 Pfam PF01464 Transglycosylase SLT domain 128 245 1.7E-14 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 AMIS_15930 bc0049eac50ad04a65a1c1be7474e5d5 272 SUPERFAMILY SSF53955 121 247 1.39E-17 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily AMIS_15930 bc0049eac50ad04a65a1c1be7474e5d5 272 Gene3D G3DSA:1.10.530.10 106 268 3.4E-24 T 14-10-2018 AMIS_52710 226e64f184c0e8e99bf10f0694d05aa3 528 Pfam PF04389 Peptidase family M28 277 493 8.3E-46 T 14-10-2018 IPR007484 Peptidase M28 AMIS_52710 226e64f184c0e8e99bf10f0694d05aa3 528 Gene3D G3DSA:3.50.30.30 122 267 7.2E-79 T 14-10-2018 AMIS_52710 226e64f184c0e8e99bf10f0694d05aa3 528 SUPERFAMILY SSF52025 136 253 9.29E-11 T 14-10-2018 AMIS_52710 226e64f184c0e8e99bf10f0694d05aa3 528 Gene3D G3DSA:3.40.630.10 83 485 7.2E-79 T 14-10-2018 AMIS_52710 226e64f184c0e8e99bf10f0694d05aa3 528 SUPERFAMILY SSF53187 257 497 2.09E-63 T 14-10-2018 AMIS_52710 226e64f184c0e8e99bf10f0694d05aa3 528 Pfam PF02225 PA domain 149 250 3.4E-16 T 14-10-2018 IPR003137 PA domain AMIS_16000 7c321d673b6d04f69a3358bcd3bec2f2 198 Gene3D G3DSA:3.60.15.10 12 195 5.8E-40 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMIS_16000 7c321d673b6d04f69a3358bcd3bec2f2 198 SUPERFAMILY SSF56281 8 194 7.58E-44 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMIS_16000 7c321d673b6d04f69a3358bcd3bec2f2 198 SMART SM00849 20 177 1.4E-26 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMIS_16000 7c321d673b6d04f69a3358bcd3bec2f2 198 Pfam PF00753 Metallo-beta-lactamase superfamily 17 177 1.7E-13 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMIS_30860 81fd031353b5ec786824ca77855e1da4 278 Pfam PF00106 short chain dehydrogenase 5 189 2.6E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_30860 81fd031353b5ec786824ca77855e1da4 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.5E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_30860 81fd031353b5ec786824ca77855e1da4 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 1.5E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_30860 81fd031353b5ec786824ca77855e1da4 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 1.5E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_30860 81fd031353b5ec786824ca77855e1da4 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 1.5E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_30860 81fd031353b5ec786824ca77855e1da4 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 1.5E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_30860 81fd031353b5ec786824ca77855e1da4 278 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 3.2E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_30860 81fd031353b5ec786824ca77855e1da4 278 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 3.2E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_30860 81fd031353b5ec786824ca77855e1da4 278 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 168 3.2E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_30860 81fd031353b5ec786824ca77855e1da4 278 SUPERFAMILY SSF51735 2 237 1.4E-56 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_30860 81fd031353b5ec786824ca77855e1da4 278 Gene3D G3DSA:3.40.50.720 2 278 1.2E-71 T 14-10-2018 AMIS_62140 03108a9f79a2a9b843ded495541019f7 1105 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMIS_62140 03108a9f79a2a9b843ded495541019f7 1105 SUPERFAMILY SSF48108 396 551 2.22E-42 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMIS_62140 03108a9f79a2a9b843ded495541019f7 1105 SUPERFAMILY SSF56059 128 400 2.3E-102 T 14-10-2018 AMIS_62140 03108a9f79a2a9b843ded495541019f7 1105 Gene3D G3DSA:1.10.1030.10 404 550 4.0E-38 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMIS_62140 03108a9f79a2a9b843ded495541019f7 1105 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1076 0.0 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMIS_62140 03108a9f79a2a9b843ded495541019f7 1105 Gene3D G3DSA:3.30.470.20 119 402 1.0E-119 T 14-10-2018 AMIS_62140 03108a9f79a2a9b843ded495541019f7 1105 SUPERFAMILY SSF52440 1 127 1.73E-46 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AMIS_62140 03108a9f79a2a9b843ded495541019f7 1105 SMART SM00851 978 1067 1.3E-20 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain AMIS_62140 03108a9f79a2a9b843ded495541019f7 1105 Gene3D G3DSA:3.30.470.20 672 958 3.9E-104 T 14-10-2018 AMIS_62140 03108a9f79a2a9b843ded495541019f7 1105 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 846 853 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMIS_62140 03108a9f79a2a9b843ded495541019f7 1105 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1088 12.871 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMIS_62140 03108a9f79a2a9b843ded495541019f7 1105 Gene3D G3DSA:3.40.50.20 1 116 1.4E-47 T 14-10-2018 AMIS_62140 03108a9f79a2a9b843ded495541019f7 1105 SUPERFAMILY SSF52440 554 681 7.48E-43 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AMIS_62140 03108a9f79a2a9b843ded495541019f7 1105 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 716 730 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMIS_62140 03108a9f79a2a9b843ded495541019f7 1105 SUPERFAMILY SSF56059 680 956 4.6E-93 T 14-10-2018 AMIS_62140 03108a9f79a2a9b843ded495541019f7 1105 Gene3D G3DSA:3.40.50.1380 959 1100 7.2E-35 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily AMIS_62140 03108a9f79a2a9b843ded495541019f7 1105 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 423 544 8.5E-37 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMIS_62140 03108a9f79a2a9b843ded495541019f7 1105 SUPERFAMILY SSF52335 961 1098 2.62E-30 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily AMIS_62140 03108a9f79a2a9b843ded495541019f7 1105 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 680 882 1.8E-35 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMIS_62140 03108a9f79a2a9b843ded495541019f7 1105 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 1.3E-66 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMIS_62140 03108a9f79a2a9b843ded495541019f7 1105 Gene3D G3DSA:3.40.50.20 551 669 9.1E-45 T 14-10-2018 AMIS_62140 03108a9f79a2a9b843ded495541019f7 1105 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 3.9E-62 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMIS_62140 03108a9f79a2a9b843ded495541019f7 1105 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 3.9E-62 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMIS_62140 03108a9f79a2a9b843ded495541019f7 1105 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 3.9E-62 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMIS_62140 03108a9f79a2a9b843ded495541019f7 1105 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 3.9E-62 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMIS_62140 03108a9f79a2a9b843ded495541019f7 1105 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 3.9E-62 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMIS_62140 03108a9f79a2a9b843ded495541019f7 1105 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 3.9E-62 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMIS_62140 03108a9f79a2a9b843ded495541019f7 1105 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 379 397 3.9E-62 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMIS_62140 03108a9f79a2a9b843ded495541019f7 1105 SMART SM01096 420 544 5.1E-60 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMIS_62140 03108a9f79a2a9b843ded495541019f7 1105 Pfam PF02142 MGS-like domain 979 1067 6.2E-15 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain AMIS_67030 37f7511f6410e92d07fe77edab8a7a31 1020 Gene3D G3DSA:3.40.50.300 324 530 5.5E-20 T 14-10-2018 AMIS_67030 37f7511f6410e92d07fe77edab8a7a31 1020 Pfam PF13086 AAA domain 374 478 3.5E-11 T 14-10-2018 AMIS_67030 37f7511f6410e92d07fe77edab8a7a31 1020 SMART SM00382 387 724 0.0033 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_67030 37f7511f6410e92d07fe77edab8a7a31 1020 SUPERFAMILY SSF52540 370 444 1.1E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_27420 3dcc7753733a9158d1c0920c2fb58659 146 Gene3D G3DSA:1.10.10.10 2 142 4.0E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_27420 3dcc7753733a9158d1c0920c2fb58659 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 52 68 1.9E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_27420 3dcc7753733a9158d1c0920c2fb58659 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 84 1.9E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_27420 3dcc7753733a9158d1c0920c2fb58659 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 104 1.9E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_27420 3dcc7753733a9158d1c0920c2fb58659 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 118 138 1.9E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_27420 3dcc7753733a9158d1c0920c2fb58659 146 SMART SM00347 28 128 5.1E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_27420 3dcc7753733a9158d1c0920c2fb58659 146 SUPERFAMILY SSF46785 9 141 2.73E-26 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_27420 3dcc7753733a9158d1c0920c2fb58659 146 Pfam PF01047 MarR family 39 91 1.1E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_52420 2e9b654db177cfe9751a3ea81bbc0cdb 180 Pfam PF01584 CheW-like domain 35 160 3.5E-14 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMIS_52420 2e9b654db177cfe9751a3ea81bbc0cdb 180 SMART SM00260 30 163 0.005 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMIS_52420 2e9b654db177cfe9751a3ea81bbc0cdb 180 SUPERFAMILY SSF50341 29 160 7.32E-15 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 AMIS_52420 2e9b654db177cfe9751a3ea81bbc0cdb 180 Gene3D G3DSA:2.30.30.40 39 152 5.8E-7 T 14-10-2018 AMIS_52420 2e9b654db177cfe9751a3ea81bbc0cdb 180 Gene3D G3DSA:2.40.50.180 53 116 5.8E-7 T 14-10-2018 AMIS_73950 725ad54290036612053b54c60c8dfc19 511 ProSitePatterns PS00455 Putative AMP-binding domain signature. 168 179 - T 14-10-2018 IPR020845 AMP-binding, conserved site AMIS_73950 725ad54290036612053b54c60c8dfc19 511 SUPERFAMILY SSF56801 4 510 8.11E-158 T 14-10-2018 AMIS_73950 725ad54290036612053b54c60c8dfc19 511 Gene3D G3DSA:3.30.300.310 414 511 1.3E-31 T 14-10-2018 AMIS_73950 725ad54290036612053b54c60c8dfc19 511 Gene3D G3DSA:3.40.50.12780 1 413 4.9E-121 T 14-10-2018 AMIS_73950 725ad54290036612053b54c60c8dfc19 511 Pfam PF13193 AMP-binding enzyme C-terminal domain 426 499 1.9E-19 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AMIS_73950 725ad54290036612053b54c60c8dfc19 511 Pfam PF00501 AMP-binding enzyme 11 417 3.2E-110 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMIS_8870 48a07160b49ef54ede676aac214f71f4 291 PIRSF PIRSF003097 1 291 6.2E-83 T 14-10-2018 IPR004513 Cell division protein FtsX GO:0016021 AMIS_8870 48a07160b49ef54ede676aac214f71f4 291 Gene3D G3DSA:3.30.70.3040 43 153 1.5E-22 T 14-10-2018 AMIS_76270 69bd0068b9857465d026f63f5d89104f 331 Pfam PF14842 FliG N-terminal domain 1 102 1.3E-29 T 14-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain AMIS_76270 69bd0068b9857465d026f63f5d89104f 331 Gene3D G3DSA:1.10.220.30 1 78 1.8E-16 T 14-10-2018 AMIS_76270 69bd0068b9857465d026f63f5d89104f 331 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 1 328 1.0E-105 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AMIS_76270 69bd0068b9857465d026f63f5d89104f 331 SUPERFAMILY SSF48029 109 321 1.44E-58 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical AMIS_76270 69bd0068b9857465d026f63f5d89104f 331 Pfam PF01706 FliG C-terminal domain 213 320 7.1E-39 T 14-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal AMIS_76270 69bd0068b9857465d026f63f5d89104f 331 PIRSF PIRSF003161 1 330 1.5E-103 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AMIS_76270 69bd0068b9857465d026f63f5d89104f 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 244 264 2.2E-65 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AMIS_76270 69bd0068b9857465d026f63f5d89104f 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 1 17 2.2E-65 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AMIS_76270 69bd0068b9857465d026f63f5d89104f 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 191 216 2.2E-65 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AMIS_76270 69bd0068b9857465d026f63f5d89104f 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 268 294 2.2E-65 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AMIS_76270 69bd0068b9857465d026f63f5d89104f 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 109 132 2.2E-65 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AMIS_76270 69bd0068b9857465d026f63f5d89104f 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 30 56 2.2E-65 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AMIS_76270 69bd0068b9857465d026f63f5d89104f 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 222 242 2.2E-65 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AMIS_76270 69bd0068b9857465d026f63f5d89104f 331 Gene3D G3DSA:1.10.220.30 191 330 1.8E-44 T 14-10-2018 AMIS_76270 69bd0068b9857465d026f63f5d89104f 331 Pfam PF14841 FliG middle domain 110 183 1.5E-26 T 14-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain AMIS_76270 69bd0068b9857465d026f63f5d89104f 331 Gene3D G3DSA:1.10.220.30 98 186 4.6E-28 T 14-10-2018 AMIS_76270 69bd0068b9857465d026f63f5d89104f 331 SUPERFAMILY SSF48029 3 111 2.49E-19 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical AMIS_58010 2c989c9161065ef41d96e1fb4afc8196 189 SUPERFAMILY SSF55874 98 188 1.17E-8 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_58010 2c989c9161065ef41d96e1fb4afc8196 189 Gene3D G3DSA:3.30.565.10 73 189 3.1E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_58010 2c989c9161065ef41d96e1fb4afc8196 189 SUPERFAMILY SSF55785 37 81 2.44E-6 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_58010 2c989c9161065ef41d96e1fb4afc8196 189 Pfam PF13581 Histidine kinase-like ATPase domain 80 167 1.5E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_25430 739dcc6f3ac537f92cb3a5423f743264 497 Pfam PF05227 CHASE3 domain 46 180 2.0E-14 T 14-10-2018 IPR007891 CHASE3 AMIS_25430 739dcc6f3ac537f92cb3a5423f743264 497 Pfam PF01627 Hpt domain 403 478 5.9E-9 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AMIS_25430 739dcc6f3ac537f92cb3a5423f743264 497 SUPERFAMILY SSF47226 335 479 1.1E-15 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMIS_25430 739dcc6f3ac537f92cb3a5423f743264 497 Gene3D G3DSA:1.20.1440.210 51 188 5.7E-11 T 14-10-2018 AMIS_25430 739dcc6f3ac537f92cb3a5423f743264 497 Gene3D G3DSA:1.20.120.160 390 491 9.2E-14 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMIS_25430 739dcc6f3ac537f92cb3a5423f743264 497 SMART SM00448 238 352 5.8E-36 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_25430 739dcc6f3ac537f92cb3a5423f743264 497 Gene3D G3DSA:3.40.50.2300 234 356 7.8E-39 T 14-10-2018 AMIS_25430 739dcc6f3ac537f92cb3a5423f743264 497 Pfam PF00072 Response regulator receiver domain 240 352 1.5E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_25430 739dcc6f3ac537f92cb3a5423f743264 497 SUPERFAMILY SSF52172 237 356 1.08E-36 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_47470 2433ba66652b9fb9d869f4859d802854 391 Gene3D G3DSA:1.10.10.10 1 69 1.6E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_47470 2433ba66652b9fb9d869f4859d802854 391 SUPERFAMILY SSF46785 9 67 3.66E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_47470 2433ba66652b9fb9d869f4859d802854 391 SUPERFAMILY SSF53067 203 383 3.61E-33 T 14-10-2018 AMIS_47470 2433ba66652b9fb9d869f4859d802854 391 Gene3D G3DSA:3.30.420.40 202 363 5.4E-63 T 14-10-2018 AMIS_47470 2433ba66652b9fb9d869f4859d802854 391 Gene3D G3DSA:3.30.420.40 85 373 5.4E-63 T 14-10-2018 AMIS_47470 2433ba66652b9fb9d869f4859d802854 391 SUPERFAMILY SSF53067 74 201 5.83E-17 T 14-10-2018 AMIS_47470 2433ba66652b9fb9d869f4859d802854 391 Pfam PF00480 ROK family 81 373 2.6E-40 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AMIS_62090 43b30218cb78185ed3db4cf49dd89be4 199 Gene3D G3DSA:3.30.63.10 40 99 3.5E-63 T 14-10-2018 AMIS_62090 43b30218cb78185ed3db4cf49dd89be4 199 Gene3D G3DSA:3.40.50.300 13 183 3.5E-63 T 14-10-2018 AMIS_62090 43b30218cb78185ed3db4cf49dd89be4 199 Pfam PF00625 Guanylate kinase 9 184 1.8E-47 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AMIS_62090 43b30218cb78185ed3db4cf49dd89be4 199 ProSitePatterns PS00856 Guanylate kinase-like signature. 43 60 - T 14-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 AMIS_62090 43b30218cb78185ed3db4cf49dd89be4 199 Hamap MF_00328 Guanylate kinase [gmk]. 7 190 34.603 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 AMIS_62090 43b30218cb78185ed3db4cf49dd89be4 199 SMART SM00072 8 190 6.5E-62 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AMIS_62090 43b30218cb78185ed3db4cf49dd89be4 199 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 10 184 6.9E-68 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 AMIS_62090 43b30218cb78185ed3db4cf49dd89be4 199 SUPERFAMILY SSF52540 7 191 1.54E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_37060 8b41da22e4c0b7c0c6350508668e05b4 283 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 4.8E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_37060 8b41da22e4c0b7c0c6350508668e05b4 283 Gene3D G3DSA:1.10.10.10 1 84 2.3E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_37060 8b41da22e4c0b7c0c6350508668e05b4 283 Gene3D G3DSA:3.40.190.10 176 248 3.5E-7 T 14-10-2018 AMIS_37060 8b41da22e4c0b7c0c6350508668e05b4 283 Pfam PF03466 LysR substrate binding domain 88 279 5.0E-24 T 14-10-2018 IPR005119 LysR, substrate-binding AMIS_37060 8b41da22e4c0b7c0c6350508668e05b4 283 SUPERFAMILY SSF53850 89 280 7.6E-27 T 14-10-2018 AMIS_37060 8b41da22e4c0b7c0c6350508668e05b4 283 Gene3D G3DSA:3.40.190.10 88 175 2.0E-6 T 14-10-2018 AMIS_37060 8b41da22e4c0b7c0c6350508668e05b4 283 SUPERFAMILY SSF46785 4 82 3.89E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_37060 8b41da22e4c0b7c0c6350508668e05b4 283 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 6.7E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_37060 8b41da22e4c0b7c0c6350508668e05b4 283 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 6.7E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_37060 8b41da22e4c0b7c0c6350508668e05b4 283 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 6.7E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_60190 34752f6cde9c017c795fa73f2190f85f 1812 Pfam PF13087 AAA domain 1271 1454 2.7E-12 T 14-10-2018 AMIS_60190 34752f6cde9c017c795fa73f2190f85f 1812 SUPERFAMILY SSF52540 288 1460 1.55E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_60190 34752f6cde9c017c795fa73f2190f85f 1812 SUPERFAMILY SSF52980 1497 1606 1.07E-13 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AMIS_60190 34752f6cde9c017c795fa73f2190f85f 1812 Gene3D G3DSA:3.40.50.300 1046 1254 5.0E-12 T 14-10-2018 AMIS_60190 34752f6cde9c017c795fa73f2190f85f 1812 Gene3D G3DSA:3.40.50.300 264 422 1.0E-15 T 14-10-2018 AMIS_60190 34752f6cde9c017c795fa73f2190f85f 1812 Pfam PF13195 Protein of unknown function (DUF4011) 23 180 4.5E-26 T 14-10-2018 IPR025103 Protein of unknown function DUF4011 AMIS_60190 34752f6cde9c017c795fa73f2190f85f 1812 Pfam PF11784 Protein of unknown function (DUF3320) 1667 1701 8.3E-9 T 14-10-2018 IPR021754 Protein of unknown function DUF3320 AMIS_60190 34752f6cde9c017c795fa73f2190f85f 1812 Gene3D G3DSA:3.40.960.10 1497 1603 1.5E-13 T 14-10-2018 AMIS_60190 34752f6cde9c017c795fa73f2190f85f 1812 Pfam PF13086 AAA domain 291 354 1.8E-6 T 14-10-2018 AMIS_60190 34752f6cde9c017c795fa73f2190f85f 1812 Gene3D G3DSA:3.40.50.300 1283 1487 1.2E-25 T 14-10-2018 AMIS_69540 0cf20d9a0a0e40863ec7730da7fab223 779 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 22 722 9.3E-266 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AMIS_69540 0cf20d9a0a0e40863ec7730da7fab223 779 TIGRFAM TIGR02696 pppGpp_PNP: guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase 12 721 0.0 T 14-10-2018 IPR014069 Guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase GO:0004654|GO:0005737|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AMIS_69540 0cf20d9a0a0e40863ec7730da7fab223 779 SMART SM00316 653 724 2.4E-15 T 14-10-2018 IPR022967 RNA-binding domain, S1 AMIS_69540 0cf20d9a0a0e40863ec7730da7fab223 779 SUPERFAMILY SSF54211 321 519 9.11E-45 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMIS_69540 0cf20d9a0a0e40863ec7730da7fab223 779 Gene3D G3DSA:3.30.230.70 10 254 5.7E-86 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AMIS_69540 0cf20d9a0a0e40863ec7730da7fab223 779 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 14 727 27.24 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AMIS_69540 0cf20d9a0a0e40863ec7730da7fab223 779 Gene3D G3DSA:3.30.230.70 264 581 7.9E-106 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AMIS_69540 0cf20d9a0a0e40863ec7730da7fab223 779 Pfam PF00013 KH domain 587 644 2.0E-11 T 14-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 AMIS_69540 0cf20d9a0a0e40863ec7730da7fab223 779 Gene3D G3DSA:2.40.50.140 582 706 2.9E-45 T 14-10-2018 AMIS_69540 0cf20d9a0a0e40863ec7730da7fab223 779 SUPERFAMILY SSF54211 15 155 1.21E-47 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMIS_69540 0cf20d9a0a0e40863ec7730da7fab223 779 SUPERFAMILY SSF46915 268 348 5.75E-17 T 14-10-2018 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AMIS_69540 0cf20d9a0a0e40863ec7730da7fab223 779 Pfam PF00575 S1 RNA binding domain 652 718 2.7E-11 T 14-10-2018 IPR003029 S1 domain GO:0003676 AMIS_69540 0cf20d9a0a0e40863ec7730da7fab223 779 SUPERFAMILY SSF55666 156 264 5.07E-28 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AMIS_69540 0cf20d9a0a0e40863ec7730da7fab223 779 SMART SM00322 583 648 2.8E-13 T 14-10-2018 IPR004087 K Homology domain GO:0003676 AMIS_69540 0cf20d9a0a0e40863ec7730da7fab223 779 SUPERFAMILY SSF50249 652 725 2.73E-15 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMIS_69540 0cf20d9a0a0e40863ec7730da7fab223 779 SUPERFAMILY SSF54791 579 686 1.39E-17 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 AMIS_69540 0cf20d9a0a0e40863ec7730da7fab223 779 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 271 347 1.9E-15 T 14-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AMIS_69540 0cf20d9a0a0e40863ec7730da7fab223 779 SUPERFAMILY SSF55666 478 577 1.06E-23 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AMIS_69540 0cf20d9a0a0e40863ec7730da7fab223 779 Pfam PF01138 3' exoribonuclease family, domain 1 25 155 1.5E-19 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AMIS_69540 0cf20d9a0a0e40863ec7730da7fab223 779 Pfam PF01138 3' exoribonuclease family, domain 1 352 484 1.1E-16 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AMIS_69540 0cf20d9a0a0e40863ec7730da7fab223 779 PIRSF PIRSF005499 12 755 2.3E-283 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AMIS_5630 ecb76565f5f673306d3161cca025ad95 319 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 3 319 22.18 T 14-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_5630 ecb76565f5f673306d3161cca025ad95 319 Pfam PF00146 NADH dehydrogenase 11 312 1.2E-101 T 14-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_30700 3e5865324ac036d620d7bc5fad950ab8 907 SUPERFAMILY SSF81660 341 547 1.66E-44 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AMIS_30700 3e5865324ac036d620d7bc5fad950ab8 907 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 498 516 4.7E-13 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AMIS_30700 3e5865324ac036d620d7bc5fad950ab8 907 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 642 658 4.7E-13 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AMIS_30700 3e5865324ac036d620d7bc5fad950ab8 907 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 673 698 4.7E-13 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AMIS_30700 3e5865324ac036d620d7bc5fad950ab8 907 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 565 575 2.9E-31 T 14-10-2018 AMIS_30700 3e5865324ac036d620d7bc5fad950ab8 907 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 171 185 2.9E-31 T 14-10-2018 AMIS_30700 3e5865324ac036d620d7bc5fad950ab8 907 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 334 348 2.9E-31 T 14-10-2018 AMIS_30700 3e5865324ac036d620d7bc5fad950ab8 907 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 642 661 2.9E-31 T 14-10-2018 AMIS_30700 3e5865324ac036d620d7bc5fad950ab8 907 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 665 677 2.9E-31 T 14-10-2018 AMIS_30700 3e5865324ac036d620d7bc5fad950ab8 907 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 543 554 2.9E-31 T 14-10-2018 AMIS_30700 3e5865324ac036d620d7bc5fad950ab8 907 Pfam PF00122 E1-E2 ATPase 121 312 5.6E-48 T 14-10-2018 AMIS_30700 3e5865324ac036d620d7bc5fad950ab8 907 SUPERFAMILY SSF81665 13 899 3.53E-76 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 AMIS_30700 3e5865324ac036d620d7bc5fad950ab8 907 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 336 342 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AMIS_30700 3e5865324ac036d620d7bc5fad950ab8 907 Gene3D G3DSA:1.20.1110.10 64 889 1.0E-223 T 14-10-2018 AMIS_30700 3e5865324ac036d620d7bc5fad950ab8 907 Gene3D G3DSA:2.70.150.10 25 237 1.0E-223 T 14-10-2018 AMIS_30700 3e5865324ac036d620d7bc5fad950ab8 907 Pfam PF13246 Cation transport ATPase (P-type) 392 479 2.1E-16 T 14-10-2018 AMIS_30700 3e5865324ac036d620d7bc5fad950ab8 907 Gene3D G3DSA:3.40.1110.10 344 550 1.0E-223 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AMIS_30700 3e5865324ac036d620d7bc5fad950ab8 907 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 613 718 1.5E-26 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AMIS_30700 3e5865324ac036d620d7bc5fad950ab8 907 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 93 355 1.8E-36 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AMIS_30700 3e5865324ac036d620d7bc5fad950ab8 907 SMART SM00831 12 86 1.5E-17 T 14-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 AMIS_30700 3e5865324ac036d620d7bc5fad950ab8 907 Pfam PF00689 Cation transporting ATPase, C-terminus 729 897 5.4E-19 T 14-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 AMIS_30700 3e5865324ac036d620d7bc5fad950ab8 907 SUPERFAMILY SSF56784 335 743 4.4E-45 T 14-10-2018 IPR036412 HAD-like superfamily AMIS_30700 3e5865324ac036d620d7bc5fad950ab8 907 Pfam PF08282 haloacid dehalogenase-like hydrolase 628 680 2.6E-6 T 14-10-2018 AMIS_30700 3e5865324ac036d620d7bc5fad950ab8 907 SUPERFAMILY SSF81653 125 234 1.57E-28 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 AMIS_30700 3e5865324ac036d620d7bc5fad950ab8 907 Gene3D G3DSA:3.40.50.1000 331 686 1.0E-223 T 14-10-2018 IPR023214 HAD superfamily AMIS_30700 3e5865324ac036d620d7bc5fad950ab8 907 Pfam PF00690 Cation transporter/ATPase, N-terminus 15 79 5.8E-14 T 14-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 AMIS_30840 72b25bacb4d3983f469a012a28639a52 215 Gene3D G3DSA:3.30.460.40 28 184 2.0E-8 T 14-10-2018 AMIS_30840 72b25bacb4d3983f469a012a28639a52 215 SUPERFAMILY SSF81301 34 185 8.5E-6 T 14-10-2018 AMIS_62040 2a418c279267d01139bb669ef661c258 185 Pfam PF01327 Polypeptide deformylase 4 148 1.3E-40 T 14-10-2018 IPR023635 Peptide deformylase AMIS_62040 2a418c279267d01139bb669ef661c258 185 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 7 156 5.3E-38 T 14-10-2018 IPR023635 Peptide deformylase AMIS_62040 2a418c279267d01139bb669ef661c258 185 Hamap MF_00163 Peptide deformylase [def]. 2 160 28.3 T 14-10-2018 IPR023635 Peptide deformylase AMIS_62040 2a418c279267d01139bb669ef661c258 185 Gene3D G3DSA:3.90.45.10 1 178 1.9E-52 T 14-10-2018 IPR036821 Peptide deformylase superfamily AMIS_62040 2a418c279267d01139bb669ef661c258 185 PRINTS PR01576 Peptide deformylase signature 118 147 1.1E-31 T 14-10-2018 IPR023635 Peptide deformylase AMIS_62040 2a418c279267d01139bb669ef661c258 185 PRINTS PR01576 Peptide deformylase signature 99 117 1.1E-31 T 14-10-2018 IPR023635 Peptide deformylase AMIS_62040 2a418c279267d01139bb669ef661c258 185 PRINTS PR01576 Peptide deformylase signature 87 98 1.1E-31 T 14-10-2018 IPR023635 Peptide deformylase AMIS_62040 2a418c279267d01139bb669ef661c258 185 PRINTS PR01576 Peptide deformylase signature 33 62 1.1E-31 T 14-10-2018 IPR023635 Peptide deformylase AMIS_62040 2a418c279267d01139bb669ef661c258 185 SUPERFAMILY SSF56420 3 163 2.09E-51 T 14-10-2018 IPR036821 Peptide deformylase superfamily AMIS_62040 2a418c279267d01139bb669ef661c258 185 PIRSF PIRSF004749 1 175 1.4E-42 T 14-10-2018 IPR023635 Peptide deformylase AMIS_77620 6b6c2da8e59e7f705a91203702aee82b 366 Gene3D G3DSA:1.20.1260.110 150 298 3.1E-45 T 14-10-2018 IPR038331 DisA, linker domain superfamily AMIS_77620 6b6c2da8e59e7f705a91203702aee82b 366 Gene3D G3DSA:1.10.150.20 299 362 3.1E-21 T 14-10-2018 AMIS_77620 6b6c2da8e59e7f705a91203702aee82b 366 Hamap MF_01438 DNA integrity scanning protein DisA [disA]. 9 363 43.686 T 14-10-2018 IPR023763 DNA integrity scanning protein, DisA AMIS_77620 6b6c2da8e59e7f705a91203702aee82b 366 SUPERFAMILY SSF143597 25 148 1.31E-28 T 14-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily AMIS_77620 6b6c2da8e59e7f705a91203702aee82b 366 Pfam PF10635 DisA bacterial checkpoint controller linker region 149 289 4.7E-50 T 14-10-2018 IPR018906 DNA integrity scanning, DisA, linker region AMIS_77620 6b6c2da8e59e7f705a91203702aee82b 366 Pfam PF12826 Helix-hairpin-helix motif 316 351 1.5E-6 T 14-10-2018 AMIS_77620 6b6c2da8e59e7f705a91203702aee82b 366 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 32 145 3.4E-25 T 14-10-2018 IPR003390 DNA integrity scanning protein, DisA, N-terminal AMIS_77620 6b6c2da8e59e7f705a91203702aee82b 366 Gene3D G3DSA:3.40.1700.10 14 149 2.1E-53 T 14-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily AMIS_77620 6b6c2da8e59e7f705a91203702aee82b 366 SUPERFAMILY SSF47781 289 360 1.59E-11 T 14-10-2018 IPR010994 RuvA domain 2-like AMIS_49480 e0bc28ac1fb3b7e5e58e66cb1cfd8048 544 Gene3D G3DSA:1.20.1560.10 5 316 6.2E-44 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMIS_49480 e0bc28ac1fb3b7e5e58e66cb1cfd8048 544 SUPERFAMILY SSF90123 1 316 3.66E-47 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMIS_49480 e0bc28ac1fb3b7e5e58e66cb1cfd8048 544 SUPERFAMILY SSF52540 322 537 2.62E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_49480 e0bc28ac1fb3b7e5e58e66cb1cfd8048 544 SMART SM00382 353 539 9.4E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_49480 e0bc28ac1fb3b7e5e58e66cb1cfd8048 544 ProSitePatterns PS00211 ABC transporters family signature. 465 479 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_49480 e0bc28ac1fb3b7e5e58e66cb1cfd8048 544 Pfam PF00005 ABC transporter 347 493 2.2E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_49480 e0bc28ac1fb3b7e5e58e66cb1cfd8048 544 Gene3D G3DSA:3.40.50.300 317 541 3.6E-68 T 14-10-2018 AMIS_49480 e0bc28ac1fb3b7e5e58e66cb1cfd8048 544 Pfam PF00664 ABC transporter transmembrane region 24 277 3.4E-18 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AMIS_49480 e0bc28ac1fb3b7e5e58e66cb1cfd8048 544 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 16 534 3.4E-193 T 14-10-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 AMIS_23520 e2103fe8ad8c9b80f9ae6871ded402ca 308 Pfam PF01380 SIS domain 142 270 5.9E-22 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AMIS_23520 e2103fe8ad8c9b80f9ae6871ded402ca 308 Gene3D G3DSA:3.40.50.10490 110 293 2.5E-42 T 14-10-2018 AMIS_23520 e2103fe8ad8c9b80f9ae6871ded402ca 308 Pfam PF01418 Helix-turn-helix domain, rpiR family 14 85 1.6E-17 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AMIS_23520 e2103fe8ad8c9b80f9ae6871ded402ca 308 SUPERFAMILY SSF46689 15 86 9.14E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_23520 e2103fe8ad8c9b80f9ae6871ded402ca 308 Gene3D G3DSA:1.10.10.10 9 91 1.1E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_23520 e2103fe8ad8c9b80f9ae6871ded402ca 308 SUPERFAMILY SSF53697 119 295 3.15E-38 T 14-10-2018 AMIS_34320 70778ec1bcefd4fabe6589731757e239 532 Pfam PF00672 HAMP domain 218 265 2.0E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_34320 70778ec1bcefd4fabe6589731757e239 532 Pfam PF12729 Four helix bundle sensory module for signal transduction 10 189 3.5E-19 T 14-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain AMIS_34320 70778ec1bcefd4fabe6589731757e239 532 SUPERFAMILY SSF58104 237 530 1.26E-59 T 14-10-2018 AMIS_34320 70778ec1bcefd4fabe6589731757e239 532 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 339 497 1.7E-31 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_34320 70778ec1bcefd4fabe6589731757e239 532 Gene3D G3DSA:1.10.287.950 216 532 8.2E-64 T 14-10-2018 AMIS_34320 70778ec1bcefd4fabe6589731757e239 532 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 375 402 2.7E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_34320 70778ec1bcefd4fabe6589731757e239 532 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 404 433 2.7E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_34320 70778ec1bcefd4fabe6589731757e239 532 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 11 36 2.7E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_34320 70778ec1bcefd4fabe6589731757e239 532 SMART SM00283 277 531 1.0E-42 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_34320 70778ec1bcefd4fabe6589731757e239 532 SMART SM00304 217 269 5.7E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_41580 227ac4094ec22fe5887378015de1a3ba 240 SUPERFAMILY SSF54593 153 238 1.73E-8 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_41580 227ac4094ec22fe5887378015de1a3ba 240 SUPERFAMILY SSF54593 20 111 4.63E-6 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_41580 227ac4094ec22fe5887378015de1a3ba 240 Gene3D G3DSA:3.10.180.10 2 121 4.0E-21 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_41580 227ac4094ec22fe5887378015de1a3ba 240 Gene3D G3DSA:3.10.180.10 123 238 1.2E-26 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_5120 85d4077dff7df3fe5a42099047432467 520 Gene3D G3DSA:3.30.565.10 360 502 3.3E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_5120 85d4077dff7df3fe5a42099047432467 520 Pfam PF00672 HAMP domain 211 267 9.7E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_5120 85d4077dff7df3fe5a42099047432467 520 SMART SM00388 281 348 1.2E-21 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_5120 85d4077dff7df3fe5a42099047432467 520 PRINTS PR00344 Bacterial sensor protein C-terminal signature 446 456 4.7E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_5120 85d4077dff7df3fe5a42099047432467 520 PRINTS PR00344 Bacterial sensor protein C-terminal signature 428 442 4.7E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_5120 85d4077dff7df3fe5a42099047432467 520 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 481 4.7E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_5120 85d4077dff7df3fe5a42099047432467 520 PRINTS PR00344 Bacterial sensor protein C-terminal signature 486 499 4.7E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_5120 85d4077dff7df3fe5a42099047432467 520 SMART SM00304 211 273 3.4E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_5120 85d4077dff7df3fe5a42099047432467 520 Gene3D G3DSA:1.10.287.130 215 348 2.1E-24 T 14-10-2018 AMIS_5120 85d4077dff7df3fe5a42099047432467 520 SUPERFAMILY SSF47384 268 349 3.92E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_5120 85d4077dff7df3fe5a42099047432467 520 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 391 501 5.1E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_5120 85d4077dff7df3fe5a42099047432467 520 SMART SM00387 391 502 3.6E-39 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_5120 85d4077dff7df3fe5a42099047432467 520 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 348 7.6E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_5120 85d4077dff7df3fe5a42099047432467 520 SUPERFAMILY SSF55874 337 504 4.32E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_31520 465aa273ed424c79b638f20449a729ba 109 Pfam PF13466 STAS domain 16 94 1.2E-15 T 14-10-2018 IPR002645 STAS domain AMIS_31520 465aa273ed424c79b638f20449a729ba 109 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 2 99 6.3E-21 T 14-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 AMIS_31520 465aa273ed424c79b638f20449a729ba 109 Gene3D G3DSA:3.30.750.24 1 102 4.5E-25 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_31520 465aa273ed424c79b638f20449a729ba 109 SUPERFAMILY SSF52091 2 99 2.04E-21 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_71090 cdc5c5f338888c15bf4d7623fd4b3b43 440 SUPERFAMILY SSF63411 16 236 8.62E-60 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMIS_71090 cdc5c5f338888c15bf4d7623fd4b3b43 440 Pfam PF05193 Peptidase M16 inactive domain 187 366 3.1E-22 T 14-10-2018 IPR007863 Peptidase M16, C-terminal AMIS_71090 cdc5c5f338888c15bf4d7623fd4b3b43 440 Gene3D G3DSA:3.30.830.10 14 236 9.0E-73 T 14-10-2018 AMIS_71090 cdc5c5f338888c15bf4d7623fd4b3b43 440 Gene3D G3DSA:3.30.830.10 242 440 8.6E-34 T 14-10-2018 AMIS_71090 cdc5c5f338888c15bf4d7623fd4b3b43 440 SUPERFAMILY SSF63411 251 436 2.17E-26 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMIS_71090 cdc5c5f338888c15bf4d7623fd4b3b43 440 Pfam PF00675 Insulinase (Peptidase family M16) 28 146 4.3E-22 T 14-10-2018 IPR011765 Peptidase M16, N-terminal AMIS_71980 b149b1f9c9b91b6c4e15a78db6cb1831 263 ProSitePatterns PS00449 ATP synthase a subunit signature. 185 194 - T 14-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMIS_71980 b149b1f9c9b91b6c4e15a78db6cb1831 263 Gene3D G3DSA:1.20.120.220 92 263 1.4E-34 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMIS_71980 b149b1f9c9b91b6c4e15a78db6cb1831 263 Hamap MF_01393 ATP synthase subunit a [atpB]. 29 262 14.187 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMIS_71980 b149b1f9c9b91b6c4e15a78db6cb1831 263 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 34 257 6.4E-45 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMIS_71980 b149b1f9c9b91b6c4e15a78db6cb1831 263 Pfam PF00119 ATP synthase A chain 41 255 7.1E-54 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMIS_71980 b149b1f9c9b91b6c4e15a78db6cb1831 263 PRINTS PR00123 ATP synthase A subunit signature 242 257 6.2E-21 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMIS_71980 b149b1f9c9b91b6c4e15a78db6cb1831 263 PRINTS PR00123 ATP synthase A subunit signature 98 114 6.2E-21 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMIS_71980 b149b1f9c9b91b6c4e15a78db6cb1831 263 PRINTS PR00123 ATP synthase A subunit signature 182 204 6.2E-21 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMIS_71980 b149b1f9c9b91b6c4e15a78db6cb1831 263 SUPERFAMILY SSF81336 92 255 5.49E-39 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMIS_25150 f85ef80ec721642117f82d6abe51044e 558 SUPERFAMILY SSF50370 439 556 1.09E-37 T 14-10-2018 IPR035992 Ricin B-like lectins AMIS_25150 f85ef80ec721642117f82d6abe51044e 558 Gene3D G3DSA:3.40.50.880 12 249 4.2E-87 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_25150 f85ef80ec721642117f82d6abe51044e 558 Gene3D G3DSA:2.80.10.50 432 524 2.5E-29 T 14-10-2018 AMIS_25150 f85ef80ec721642117f82d6abe51044e 558 Pfam PF06283 Trehalose utilisation 29 239 3.1E-80 T 14-10-2018 IPR029010 ThuA-like domain AMIS_25150 f85ef80ec721642117f82d6abe51044e 558 Pfam PF00652 Ricin-type beta-trefoil lectin domain 434 554 1.5E-28 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_25150 f85ef80ec721642117f82d6abe51044e 558 SMART SM00458 431 557 7.7E-26 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_25150 f85ef80ec721642117f82d6abe51044e 558 SUPERFAMILY SSF52317 26 250 1.05E-45 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_25150 f85ef80ec721642117f82d6abe51044e 558 Pfam PF06439 Domain of Unknown Function (DUF1080) 252 426 7.6E-35 T 14-10-2018 IPR010496 Domain of unknown function DUF1080 AMIS_25150 f85ef80ec721642117f82d6abe51044e 558 Gene3D G3DSA:2.80.10.50 525 558 2.2E-10 T 14-10-2018 AMIS_25150 f85ef80ec721642117f82d6abe51044e 558 Gene3D G3DSA:2.60.120.560 251 431 2.6E-40 T 14-10-2018 AMIS_73420 a5b5c55832cd97da93900db8dba04396 248 Pfam PF00005 ABC transporter 24 156 3.2E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_73420 a5b5c55832cd97da93900db8dba04396 248 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_73420 a5b5c55832cd97da93900db8dba04396 248 SUPERFAMILY SSF52540 5 224 1.64E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_73420 a5b5c55832cd97da93900db8dba04396 248 Gene3D G3DSA:3.40.50.300 1 246 3.1E-63 T 14-10-2018 AMIS_73420 a5b5c55832cd97da93900db8dba04396 248 SMART SM00382 33 216 7.7E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_15710 f3442d421c0dcd62b83826597b756718 1523 Pfam PF04898 Glutamate synthase central domain 476 764 5.2E-112 T 14-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 AMIS_15710 f3442d421c0dcd62b83826597b756718 1523 Gene3D G3DSA:3.60.20.10 25 458 7.3E-174 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMIS_15710 f3442d421c0dcd62b83826597b756718 1523 Gene3D G3DSA:3.20.20.70 459 813 5.9E-133 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_15710 f3442d421c0dcd62b83826597b756718 1523 SUPERFAMILY SSF51395 464 1228 5.7E-262 T 14-10-2018 AMIS_15710 f3442d421c0dcd62b83826597b756718 1523 Gene3D G3DSA:2.160.20.60 1244 1512 1.9E-103 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 AMIS_15710 f3442d421c0dcd62b83826597b756718 1523 Pfam PF01645 Conserved region in glutamate synthase 828 1192 1.1E-152 T 14-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 AMIS_15710 f3442d421c0dcd62b83826597b756718 1523 SUPERFAMILY SSF69336 1241 1503 2.09E-89 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 AMIS_15710 f3442d421c0dcd62b83826597b756718 1523 SUPERFAMILY SSF56235 25 452 2.57E-144 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMIS_15710 f3442d421c0dcd62b83826597b756718 1523 Pfam PF00310 Glutamine amidotransferases class-II 25 450 8.5E-173 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain AMIS_15710 f3442d421c0dcd62b83826597b756718 1523 Pfam PF01493 GXGXG motif 1273 1455 8.1E-76 T 14-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 AMIS_15710 f3442d421c0dcd62b83826597b756718 1523 Gene3D G3DSA:3.20.20.70 814 1238 7.0E-188 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_54460 0e5ec87a05f904b5c9e107d3795cf958 744 SMART SM01079 59 246 3.2E-4 T 14-10-2018 IPR006189 CHASE domain AMIS_54460 0e5ec87a05f904b5c9e107d3795cf958 744 SUPERFAMILY SSF55874 524 678 4.19E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_54460 0e5ec87a05f904b5c9e107d3795cf958 744 PRINTS PR00344 Bacterial sensor protein C-terminal signature 664 677 3.2E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_54460 0e5ec87a05f904b5c9e107d3795cf958 744 PRINTS PR00344 Bacterial sensor protein C-terminal signature 625 635 3.2E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_54460 0e5ec87a05f904b5c9e107d3795cf958 744 PRINTS PR00344 Bacterial sensor protein C-terminal signature 640 658 3.2E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_54460 0e5ec87a05f904b5c9e107d3795cf958 744 PRINTS PR00344 Bacterial sensor protein C-terminal signature 607 621 3.2E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_54460 0e5ec87a05f904b5c9e107d3795cf958 744 Gene3D G3DSA:3.30.565.10 533 691 2.4E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_54460 0e5ec87a05f904b5c9e107d3795cf958 744 Gene3D G3DSA:1.10.287.130 459 524 2.1E-10 T 14-10-2018 AMIS_54460 0e5ec87a05f904b5c9e107d3795cf958 744 SMART SM00388 463 529 2.0E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_54460 0e5ec87a05f904b5c9e107d3795cf958 744 SMART SM00387 567 680 1.2E-37 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_54460 0e5ec87a05f904b5c9e107d3795cf958 744 SUPERFAMILY SSF47384 447 525 1.55E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_54460 0e5ec87a05f904b5c9e107d3795cf958 744 Pfam PF00512 His Kinase A (phospho-acceptor) domain 465 526 2.3E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_54460 0e5ec87a05f904b5c9e107d3795cf958 744 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 568 678 1.3E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_54460 0e5ec87a05f904b5c9e107d3795cf958 744 SUPERFAMILY SSF55785 324 455 1.26E-9 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_54460 0e5ec87a05f904b5c9e107d3795cf958 744 Gene3D G3DSA:3.30.450.20 324 458 1.3E-12 T 14-10-2018 AMIS_54460 0e5ec87a05f904b5c9e107d3795cf958 744 Pfam PF03924 CHASE domain 62 221 3.0E-17 T 14-10-2018 IPR006189 CHASE domain AMIS_80540 4f5d0bbc8d8a388c59869dfec1425803 265 Pfam PF08282 haloacid dehalogenase-like hydrolase 8 259 7.1E-52 T 14-10-2018 AMIS_80540 4f5d0bbc8d8a388c59869dfec1425803 265 Gene3D G3DSA:3.30.1240.10 83 188 4.9E-58 T 14-10-2018 AMIS_80540 4f5d0bbc8d8a388c59869dfec1425803 265 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 7 259 1.4E-46 T 14-10-2018 IPR000150 Cof family GO:0016787 AMIS_80540 4f5d0bbc8d8a388c59869dfec1425803 265 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 7 232 9.1E-25 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 AMIS_80540 4f5d0bbc8d8a388c59869dfec1425803 265 SUPERFAMILY SSF56784 2 261 2.21E-61 T 14-10-2018 IPR036412 HAD-like superfamily AMIS_80540 4f5d0bbc8d8a388c59869dfec1425803 265 Gene3D G3DSA:3.40.50.1000 6 259 4.9E-58 T 14-10-2018 IPR023214 HAD superfamily AMIS_37140 b07864f114ead4637f53a0d4cf23d6da 496 Gene3D G3DSA:3.60.40.10 251 494 1.5E-44 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_37140 b07864f114ead4637f53a0d4cf23d6da 496 Gene3D G3DSA:3.30.450.20 119 238 3.9E-10 T 14-10-2018 AMIS_37140 b07864f114ead4637f53a0d4cf23d6da 496 SUPERFAMILY SSF55785 138 238 6.49E-6 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_37140 b07864f114ead4637f53a0d4cf23d6da 496 SUPERFAMILY SSF81606 303 490 1.2E-7 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_37140 b07864f114ead4637f53a0d4cf23d6da 496 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 314 494 9.5E-35 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_37140 b07864f114ead4637f53a0d4cf23d6da 496 SMART SM00331 288 494 5.8E-32 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_4720 e3fdc918723eac01ef8434d95c3c9c6f 296 Gene3D G3DSA:3.40.190.10 144 241 2.1E-55 T 14-10-2018 AMIS_4720 e3fdc918723eac01ef8434d95c3c9c6f 296 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 57 281 3.8E-48 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMIS_4720 e3fdc918723eac01ef8434d95c3c9c6f 296 SMART SM00062 56 285 8.6E-28 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMIS_4720 e3fdc918723eac01ef8434d95c3c9c6f 296 SUPERFAMILY SSF53850 6 282 2.85E-48 T 14-10-2018 AMIS_4720 e3fdc918723eac01ef8434d95c3c9c6f 296 Gene3D G3DSA:3.40.190.10 54 276 2.1E-55 T 14-10-2018 AMIS_64880 68e732928c43cc761775af5b955d202b 337 Pfam PF00356 Bacterial regulatory proteins, lacI family 9 53 4.4E-14 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_64880 68e732928c43cc761775af5b955d202b 337 Gene3D G3DSA:1.10.260.40 1 59 3.8E-19 T 14-10-2018 AMIS_64880 68e732928c43cc761775af5b955d202b 337 Gene3D G3DSA:3.40.50.2300 170 297 1.3E-54 T 14-10-2018 AMIS_64880 68e732928c43cc761775af5b955d202b 337 SUPERFAMILY SSF47413 6 64 2.19E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_64880 68e732928c43cc761775af5b955d202b 337 SMART SM00354 7 76 3.9E-20 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_64880 68e732928c43cc761775af5b955d202b 337 SUPERFAMILY SSF53822 86 336 1.47E-50 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_64880 68e732928c43cc761775af5b955d202b 337 Pfam PF13377 Periplasmic binding protein-like domain 179 336 1.0E-30 T 14-10-2018 AMIS_64880 68e732928c43cc761775af5b955d202b 337 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 9 19 2.3E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_64880 68e732928c43cc761775af5b955d202b 337 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 19 29 2.3E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_64880 68e732928c43cc761775af5b955d202b 337 Gene3D G3DSA:3.40.50.2300 60 314 1.3E-54 T 14-10-2018 AMIS_64880 68e732928c43cc761775af5b955d202b 337 ProSitePatterns PS00356 LacI-type HTH domain signature. 10 28 - T 14-10-2018 AMIS_62120 18336689491034f5679193a90e1eff15 425 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 5 425 48.119 T 14-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 AMIS_62120 18336689491034f5679193a90e1eff15 425 Pfam PF00202 Aminotransferase class-III 30 421 5.8E-116 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMIS_62120 18336689491034f5679193a90e1eff15 425 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 243 280 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMIS_62120 18336689491034f5679193a90e1eff15 425 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 17 422 7.8E-165 T 14-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 AMIS_62120 18336689491034f5679193a90e1eff15 425 Gene3D G3DSA:3.90.1150.10 13 414 4.0E-159 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMIS_62120 18336689491034f5679193a90e1eff15 425 SUPERFAMILY SSF53383 8 423 2.45E-119 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_62120 18336689491034f5679193a90e1eff15 425 Gene3D G3DSA:3.40.640.10 65 331 4.0E-159 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_2910 411d51fe0c7196920e0b888f42465145 209 Gene3D G3DSA:3.30.70.3270 27 182 1.5E-46 T 14-10-2018 AMIS_2910 411d51fe0c7196920e0b888f42465145 209 SUPERFAMILY SSF54862 27 142 2.97E-26 T 14-10-2018 AMIS_2910 411d51fe0c7196920e0b888f42465145 209 Pfam PF12838 4Fe-4S dicluster domain 53 111 2.3E-11 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMIS_2910 411d51fe0c7196920e0b888f42465145 209 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 10 137 5.9E-41 T 14-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_2910 411d51fe0c7196920e0b888f42465145 209 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMIS_2910 411d51fe0c7196920e0b888f42465145 209 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 1 147 28.024 T 14-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_19360 05c0bd2af75ea211b453879c59c0c563 622 SMART SM01043 108 249 3.7E-49 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain AMIS_19360 05c0bd2af75ea211b453879c59c0c563 622 Gene3D G3DSA:1.10.10.10 3 102 9.3E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_19360 05c0bd2af75ea211b453879c59c0c563 622 SUPERFAMILY SSF46894 10 101 5.95E-8 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_19360 05c0bd2af75ea211b453879c59c0c563 622 Pfam PF00486 Transcriptional regulatory protein, C terminal 29 101 2.3E-6 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_19360 05c0bd2af75ea211b453879c59c0c563 622 Pfam PF03704 Bacterial transcriptional activator domain 108 249 3.9E-38 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain AMIS_19360 05c0bd2af75ea211b453879c59c0c563 622 SUPERFAMILY SSF48452 104 262 8.73E-36 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_19360 05c0bd2af75ea211b453879c59c0c563 622 SMART SM00862 22 101 3.1E-6 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_19360 05c0bd2af75ea211b453879c59c0c563 622 Gene3D G3DSA:1.25.40.10 106 270 3.7E-48 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_55720 90f9b1d10f457d9027ca0be090f06a9b 235 Gene3D G3DSA:3.40.225.10 6 232 4.7E-50 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily AMIS_55720 90f9b1d10f457d9027ca0be090f06a9b 235 SMART SM01007 10 200 4.1E-48 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal AMIS_55720 90f9b1d10f457d9027ca0be090f06a9b 235 SUPERFAMILY SSF53639 7 221 1.51E-52 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily AMIS_55720 90f9b1d10f457d9027ca0be090f06a9b 235 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 12 200 1.4E-35 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal AMIS_69130 bade216ca8a45cc1dfb9df3beff0354e 448 SMART SM00345 15 74 2.2E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_69130 bade216ca8a45cc1dfb9df3beff0354e 448 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 74 4.8E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_69130 bade216ca8a45cc1dfb9df3beff0354e 448 SUPERFAMILY SSF46785 13 86 2.93E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_69130 bade216ca8a45cc1dfb9df3beff0354e 448 Gene3D G3DSA:3.40.640.10 127 341 6.6E-46 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_69130 bade216ca8a45cc1dfb9df3beff0354e 448 Gene3D G3DSA:3.90.1150.10 94 427 6.6E-46 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMIS_69130 bade216ca8a45cc1dfb9df3beff0354e 448 SUPERFAMILY SSF53383 82 437 4.23E-59 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_69130 bade216ca8a45cc1dfb9df3beff0354e 448 Gene3D G3DSA:1.10.10.10 13 85 6.2E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_69130 bade216ca8a45cc1dfb9df3beff0354e 448 Pfam PF00155 Aminotransferase class I and II 118 434 2.7E-23 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMIS_70230 f948e18cc687059e78f9a50d1474c658 118 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 1 113 28.507 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_70230 f948e18cc687059e78f9a50d1474c658 118 PRINTS PR00061 Ribosomal protein L19 signature 3 32 2.2E-39 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_70230 f948e18cc687059e78f9a50d1474c658 118 PRINTS PR00061 Ribosomal protein L19 signature 33 62 2.2E-39 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_70230 f948e18cc687059e78f9a50d1474c658 118 PRINTS PR00061 Ribosomal protein L19 signature 87 112 2.2E-39 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_70230 f948e18cc687059e78f9a50d1474c658 118 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 2 112 3.1E-46 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_70230 f948e18cc687059e78f9a50d1474c658 118 PIRSF PIRSF002191 1 118 2.3E-49 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_70230 f948e18cc687059e78f9a50d1474c658 118 ProSitePatterns PS01015 Ribosomal protein L19 signature. 85 100 - T 14-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_70230 f948e18cc687059e78f9a50d1474c658 118 Gene3D G3DSA:2.30.30.790 1 116 3.4E-15 T 14-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_70230 f948e18cc687059e78f9a50d1474c658 118 Pfam PF01245 Ribosomal protein L19 4 111 7.9E-47 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_70230 f948e18cc687059e78f9a50d1474c658 118 SUPERFAMILY SSF50104 1 115 1.4E-44 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily AMIS_19190 f13bf892b27003c886d6ccf2f9b3fc83 270 Gene3D G3DSA:3.40.50.1820 1 265 6.0E-73 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_19190 f13bf892b27003c886d6ccf2f9b3fc83 270 SUPERFAMILY SSF53474 2 264 2.3E-57 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_19190 f13bf892b27003c886d6ccf2f9b3fc83 270 Pfam PF00561 alpha/beta hydrolase fold 13 251 3.5E-23 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_19190 f13bf892b27003c886d6ccf2f9b3fc83 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 40 55 2.7E-19 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_19190 f13bf892b27003c886d6ccf2f9b3fc83 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 85 98 2.7E-19 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_19190 f13bf892b27003c886d6ccf2f9b3fc83 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 209 223 2.7E-19 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_19190 f13bf892b27003c886d6ccf2f9b3fc83 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 99 112 2.7E-19 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_63740 ae656e957d8704b0dadabd776178e302 141 Pfam PF00462 Glutaredoxin 66 123 3.6E-10 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AMIS_63740 ae656e957d8704b0dadabd776178e302 141 SUPERFAMILY SSF52833 55 126 5.36E-11 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMIS_63740 ae656e957d8704b0dadabd776178e302 141 Gene3D G3DSA:3.40.30.10 65 140 1.3E-14 T 14-10-2018 AMIS_61120 079dc342bf18aeda516d28bb87abf10e 346 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AMIS_61120 079dc342bf18aeda516d28bb87abf10e 346 Gene3D G3DSA:3.90.180.10 16 335 4.7E-96 T 14-10-2018 AMIS_61120 079dc342bf18aeda516d28bb87abf10e 346 SUPERFAMILY SSF51735 141 313 2.55E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_61120 079dc342bf18aeda516d28bb87abf10e 346 Gene3D G3DSA:3.40.50.720 154 292 4.7E-96 T 14-10-2018 AMIS_61120 079dc342bf18aeda516d28bb87abf10e 346 SMART SM00829 7 344 5.0E-5 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMIS_61120 079dc342bf18aeda516d28bb87abf10e 346 Pfam PF00107 Zinc-binding dehydrogenase 176 308 1.3E-20 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMIS_61120 079dc342bf18aeda516d28bb87abf10e 346 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 24 126 2.0E-30 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMIS_61120 079dc342bf18aeda516d28bb87abf10e 346 SUPERFAMILY SSF50129 1 344 9.44E-50 T 14-10-2018 IPR011032 GroES-like superfamily AMIS_59470 cd896bd298289f25fe3237b660a182d3 417 SUPERFAMILY SSF53649 36 413 3.93E-107 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AMIS_59470 cd896bd298289f25fe3237b660a182d3 417 PRINTS PR00113 Alkaline phosphatase signature 268 297 5.1E-35 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AMIS_59470 cd896bd298289f25fe3237b660a182d3 417 PRINTS PR00113 Alkaline phosphatase signature 176 186 5.1E-35 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AMIS_59470 cd896bd298289f25fe3237b660a182d3 417 PRINTS PR00113 Alkaline phosphatase signature 94 109 5.1E-35 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AMIS_59470 cd896bd298289f25fe3237b660a182d3 417 PRINTS PR00113 Alkaline phosphatase signature 42 62 5.1E-35 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AMIS_59470 cd896bd298289f25fe3237b660a182d3 417 PRINTS PR00113 Alkaline phosphatase signature 131 151 5.1E-35 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AMIS_59470 cd896bd298289f25fe3237b660a182d3 417 Gene3D G3DSA:3.40.720.10 25 416 8.2E-110 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AMIS_59470 cd896bd298289f25fe3237b660a182d3 417 SMART SM00098 43 417 2.5E-59 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AMIS_59470 cd896bd298289f25fe3237b660a182d3 417 Pfam PF00245 Alkaline phosphatase 43 344 3.6E-75 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AMIS_59470 cd896bd298289f25fe3237b660a182d3 417 Pfam PF00245 Alkaline phosphatase 374 413 2.0E-6 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AMIS_12150 5dbbfcf2397ddeaf850186f3816fab26 245 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 213 225 1.8E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_12150 5dbbfcf2397ddeaf850186f3816fab26 245 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 197 213 1.8E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_12150 5dbbfcf2397ddeaf850186f3816fab26 245 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 197 1.8E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_12150 5dbbfcf2397ddeaf850186f3816fab26 245 ProSitePatterns PS00622 LuxR-type HTH domain signature. 197 224 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_12150 5dbbfcf2397ddeaf850186f3816fab26 245 Pfam PF00196 Bacterial regulatory proteins, luxR family 182 237 1.7E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_12150 5dbbfcf2397ddeaf850186f3816fab26 245 SMART SM00421 180 237 6.7E-25 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_12150 5dbbfcf2397ddeaf850186f3816fab26 245 SMART SM00448 7 120 7.5E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_12150 5dbbfcf2397ddeaf850186f3816fab26 245 SUPERFAMILY SSF52172 7 132 3.27E-34 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_12150 5dbbfcf2397ddeaf850186f3816fab26 245 Pfam PF00072 Response regulator receiver domain 9 120 1.2E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_12150 5dbbfcf2397ddeaf850186f3816fab26 245 SUPERFAMILY SSF46894 177 243 5.78E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_57030 b4f2cb9da9b6517baaa27412a04a47e4 276 Gene3D G3DSA:3.20.20.60 1 276 1.1E-78 T 14-10-2018 AMIS_57030 b4f2cb9da9b6517baaa27412a04a47e4 276 PIRSF PIRSF015582 1 276 4.6E-72 T 14-10-2018 IPR011206 Citrate lyase beta subunit-like AMIS_57030 b4f2cb9da9b6517baaa27412a04a47e4 276 SUPERFAMILY SSF51621 1 226 2.09E-53 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AMIS_57030 b4f2cb9da9b6517baaa27412a04a47e4 276 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 2 215 2.4E-29 T 14-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 AMIS_9600 dbafab694dd5846b12f2c8e89fca9922 326 Gene3D G3DSA:3.40.50.1820 22 320 1.4E-41 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_9600 dbafab694dd5846b12f2c8e89fca9922 326 SUPERFAMILY SSF53474 31 319 8.24E-40 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_9600 dbafab694dd5846b12f2c8e89fca9922 326 Pfam PF00561 alpha/beta hydrolase fold 56 160 1.8E-14 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_9600 dbafab694dd5846b12f2c8e89fca9922 326 PRINTS PR00111 Alpha/beta hydrolase fold signature 80 95 8.5E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_9600 dbafab694dd5846b12f2c8e89fca9922 326 PRINTS PR00111 Alpha/beta hydrolase fold signature 139 152 8.5E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_9600 dbafab694dd5846b12f2c8e89fca9922 326 PRINTS PR00111 Alpha/beta hydrolase fold signature 125 138 8.5E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_62770 4d56e7fa74b2a63d0c2885d851c2f716 392 Gene3D G3DSA:1.20.1640.10 114 327 3.9E-8 T 14-10-2018 AMIS_62770 4d56e7fa74b2a63d0c2885d851c2f716 392 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 17 317 23.748 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AMIS_62770 4d56e7fa74b2a63d0c2885d851c2f716 392 SUPERFAMILY SSF82866 123 318 8.76E-30 T 14-10-2018 AMIS_62770 4d56e7fa74b2a63d0c2885d851c2f716 392 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 45 306 6.8E-57 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AMIS_62770 4d56e7fa74b2a63d0c2885d851c2f716 392 PRINTS PR01755 Bacterial translocase SecF protein signature 166 180 5.6E-23 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMIS_62770 4d56e7fa74b2a63d0c2885d851c2f716 392 PRINTS PR01755 Bacterial translocase SecF protein signature 44 59 5.6E-23 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMIS_62770 4d56e7fa74b2a63d0c2885d851c2f716 392 PRINTS PR01755 Bacterial translocase SecF protein signature 249 264 5.6E-23 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMIS_62770 4d56e7fa74b2a63d0c2885d851c2f716 392 PRINTS PR01755 Bacterial translocase SecF protein signature 214 232 5.6E-23 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMIS_62770 4d56e7fa74b2a63d0c2885d851c2f716 392 Pfam PF02355 Protein export membrane protein 123 315 3.3E-52 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AMIS_62770 4d56e7fa74b2a63d0c2885d851c2f716 392 Pfam PF07549 SecD/SecF GG Motif 40 62 4.0E-5 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AMIS_40370 73ed9891b1a6903d44f0bc183dd5d236 403 Pfam PF00480 ROK family 78 378 4.4E-50 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AMIS_40370 73ed9891b1a6903d44f0bc183dd5d236 403 SUPERFAMILY SSF53067 75 380 1.03E-54 T 14-10-2018 AMIS_40370 73ed9891b1a6903d44f0bc183dd5d236 403 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 52 2.8E-6 T 14-10-2018 AMIS_40370 73ed9891b1a6903d44f0bc183dd5d236 403 Gene3D G3DSA:3.30.420.40 83 366 3.1E-82 T 14-10-2018 AMIS_40370 73ed9891b1a6903d44f0bc183dd5d236 403 Gene3D G3DSA:3.30.420.40 197 362 3.1E-82 T 14-10-2018 AMIS_40370 73ed9891b1a6903d44f0bc183dd5d236 403 Gene3D G3DSA:1.10.10.10 4 70 1.9E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_40370 73ed9891b1a6903d44f0bc183dd5d236 403 SUPERFAMILY SSF46785 10 69 2.21E-5 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_15370 f2b80586b102ab024c3560d3d6b79770 547 Pfam PF13614 AAA domain 296 464 1.1E-6 T 14-10-2018 IPR025669 AAA domain AMIS_15370 f2b80586b102ab024c3560d3d6b79770 547 SUPERFAMILY SSF52540 294 538 3.54E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_15370 f2b80586b102ab024c3560d3d6b79770 547 Gene3D G3DSA:3.40.50.300 294 538 3.7E-22 T 14-10-2018 AMIS_49260 c1cc4f0d3d00ccd1870ef07b67b4e575 1792 Pfam PF12245 Bacterial Ig-like domain (group 3) 1448 1474 0.04 T 14-10-2018 IPR022038 Bacterial Ig-like domain AMIS_49260 c1cc4f0d3d00ccd1870ef07b67b4e575 1792 Pfam PF12245 Bacterial Ig-like domain (group 3) 1529 1549 0.01 T 14-10-2018 IPR022038 Bacterial Ig-like domain AMIS_49260 c1cc4f0d3d00ccd1870ef07b67b4e575 1792 Gene3D G3DSA:2.60.120.260 1553 1705 1.4E-31 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_49260 c1cc4f0d3d00ccd1870ef07b67b4e575 1792 Gene3D G3DSA:2.60.120.260 816 967 6.5E-24 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_49260 c1cc4f0d3d00ccd1870ef07b67b4e575 1792 Gene3D G3DSA:2.60.120.260 1071 1229 1.3E-33 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_49260 c1cc4f0d3d00ccd1870ef07b67b4e575 1792 Gene3D G3DSA:2.60.40.10 978 1070 1.3E-12 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_49260 c1cc4f0d3d00ccd1870ef07b67b4e575 1792 Gene3D G3DSA:1.50.10.10 303 561 8.2E-8 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 AMIS_49260 c1cc4f0d3d00ccd1870ef07b67b4e575 1792 SUPERFAMILY SSF49785 1552 1704 2.13E-6 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_49260 c1cc4f0d3d00ccd1870ef07b67b4e575 1792 SUPERFAMILY SSF48208 269 761 1.63E-16 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AMIS_49260 c1cc4f0d3d00ccd1870ef07b67b4e575 1792 SUPERFAMILY SSF49785 823 966 6.73E-9 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_49260 c1cc4f0d3d00ccd1870ef07b67b4e575 1792 Pfam PF00754 F5/8 type C domain 837 956 5.8E-10 T 14-10-2018 IPR000421 Coagulation factor 5/8 C-terminal domain AMIS_49260 c1cc4f0d3d00ccd1870ef07b67b4e575 1792 Pfam PF07532 Bacterial Ig-like domain (group 4) 1314 1371 2.7E-11 T 14-10-2018 IPR011081 Bacterial Ig-related AMIS_49260 c1cc4f0d3d00ccd1870ef07b67b4e575 1792 Pfam PF07532 Bacterial Ig-like domain (group 4) 1236 1291 1.4E-10 T 14-10-2018 IPR011081 Bacterial Ig-related AMIS_49260 c1cc4f0d3d00ccd1870ef07b67b4e575 1792 SMART SM00089 995 1070 0.42 T 14-10-2018 IPR022409 PKD/Chitinase domain AMIS_49260 c1cc4f0d3d00ccd1870ef07b67b4e575 1792 SMART SM00089 1394 1474 0.56 T 14-10-2018 IPR022409 PKD/Chitinase domain AMIS_72720 ed7a446cd24cf76117a79eabb2be7b39 549 SMART SM00228 465 536 2.7E-11 T 14-10-2018 IPR001478 PDZ domain GO:0005515 AMIS_72720 ed7a446cd24cf76117a79eabb2be7b39 549 SUPERFAMILY SSF50494 240 462 1.15E-55 T 14-10-2018 IPR009003 Peptidase S1, PA clan AMIS_72720 ed7a446cd24cf76117a79eabb2be7b39 549 Gene3D G3DSA:2.30.42.10 463 549 9.8E-26 T 14-10-2018 AMIS_72720 ed7a446cd24cf76117a79eabb2be7b39 549 Pfam PF13365 Trypsin-like peptidase domain 262 424 3.1E-32 T 14-10-2018 AMIS_72720 ed7a446cd24cf76117a79eabb2be7b39 549 Gene3D G3DSA:2.40.10.10 235 324 3.8E-25 T 14-10-2018 AMIS_72720 ed7a446cd24cf76117a79eabb2be7b39 549 SUPERFAMILY SSF50156 449 545 3.81E-21 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 AMIS_72720 ed7a446cd24cf76117a79eabb2be7b39 549 Gene3D G3DSA:2.40.10.10 325 461 1.3E-38 T 14-10-2018 AMIS_72720 ed7a446cd24cf76117a79eabb2be7b39 549 Pfam PF13180 PDZ domain 465 545 2.1E-21 T 14-10-2018 IPR001478 PDZ domain GO:0005515 AMIS_72720 ed7a446cd24cf76117a79eabb2be7b39 549 PRINTS PR00834 HtrA/DegQ protease family signature 271 283 1.3E-33 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMIS_72720 ed7a446cd24cf76117a79eabb2be7b39 549 PRINTS PR00834 HtrA/DegQ protease family signature 395 412 1.3E-33 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMIS_72720 ed7a446cd24cf76117a79eabb2be7b39 549 PRINTS PR00834 HtrA/DegQ protease family signature 494 506 1.3E-33 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMIS_72720 ed7a446cd24cf76117a79eabb2be7b39 549 PRINTS PR00834 HtrA/DegQ protease family signature 294 314 1.3E-33 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMIS_72720 ed7a446cd24cf76117a79eabb2be7b39 549 PRINTS PR00834 HtrA/DegQ protease family signature 417 434 1.3E-33 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMIS_56750 dbf24348f0055323f8d28bd085070ded 345 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 10 154 3.1E-32 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AMIS_56750 dbf24348f0055323f8d28bd085070ded 345 Gene3D G3DSA:3.40.640.10 4 181 1.0E-40 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_56750 dbf24348f0055323f8d28bd085070ded 345 PIRSF PIRSF000390 238 343 0.019 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AMIS_56750 dbf24348f0055323f8d28bd085070ded 345 PIRSF PIRSF000390 6 185 4.6E-32 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AMIS_56750 dbf24348f0055323f8d28bd085070ded 345 Gene3D G3DSA:3.90.1150.10 240 342 2.3E-10 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMIS_56750 dbf24348f0055323f8d28bd085070ded 345 SUPERFAMILY SSF53383 7 339 1.64E-41 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_7510 d7368fd6b2eb23546db3ff71bb65b0d6 1205 SMART SM01058 523 624 2.4E-50 T 14-10-2018 IPR003711 CarD-like/TRCF domain AMIS_7510 d7368fd6b2eb23546db3ff71bb65b0d6 1205 Gene3D G3DSA:3.40.50.300 590 829 8.5E-234 T 14-10-2018 AMIS_7510 d7368fd6b2eb23546db3ff71bb65b0d6 1205 SUPERFAMILY SSF143517 1037 1192 3.14E-33 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain AMIS_7510 d7368fd6b2eb23546db3ff71bb65b0d6 1205 Pfam PF00270 DEAD/DEAH box helicase 673 815 7.7E-17 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMIS_7510 d7368fd6b2eb23546db3ff71bb65b0d6 1205 Pfam PF02559 CarD-like/TRCF domain 524 623 5.3E-32 T 14-10-2018 IPR003711 CarD-like/TRCF domain AMIS_7510 d7368fd6b2eb23546db3ff71bb65b0d6 1205 Gene3D G3DSA:3.40.50.300 523 1037 8.5E-234 T 14-10-2018 AMIS_7510 d7368fd6b2eb23546db3ff71bb65b0d6 1205 Gene3D G3DSA:3.90.1150.50 1047 1193 2.4E-24 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain AMIS_7510 d7368fd6b2eb23546db3ff71bb65b0d6 1205 Pfam PF00271 Helicase conserved C-terminal domain 858 957 4.0E-16 T 14-10-2018 IPR001650 Helicase, C-terminal AMIS_7510 d7368fd6b2eb23546db3ff71bb65b0d6 1205 SUPERFAMILY SSF52540 43 370 1.37E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_7510 d7368fd6b2eb23546db3ff71bb65b0d6 1205 Gene3D G3DSA:3.30.2060.10 151 237 1.8E-57 T 14-10-2018 AMIS_7510 d7368fd6b2eb23546db3ff71bb65b0d6 1205 Gene3D G3DSA:2.30.30.840 527 589 8.5E-234 T 14-10-2018 AMIS_7510 d7368fd6b2eb23546db3ff71bb65b0d6 1205 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 169 1124 0.0 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 AMIS_7510 d7368fd6b2eb23546db3ff71bb65b0d6 1205 SMART SM00982 1051 1149 1.7E-35 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 AMIS_7510 d7368fd6b2eb23546db3ff71bb65b0d6 1205 SUPERFAMILY SSF52540 406 504 6.37E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_7510 d7368fd6b2eb23546db3ff71bb65b0d6 1205 Gene3D G3DSA:3.40.50.11180 59 321 1.8E-57 T 14-10-2018 AMIS_7510 d7368fd6b2eb23546db3ff71bb65b0d6 1205 SMART SM00490 874 958 1.0E-19 T 14-10-2018 IPR001650 Helicase, C-terminal AMIS_7510 d7368fd6b2eb23546db3ff71bb65b0d6 1205 SUPERFAMILY SSF52540 830 1038 8.45E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_7510 d7368fd6b2eb23546db3ff71bb65b0d6 1205 SUPERFAMILY SSF141259 516 595 4.84E-20 T 14-10-2018 IPR036101 CarD-like/TRCF domain superfamily AMIS_7510 d7368fd6b2eb23546db3ff71bb65b0d6 1205 Pfam PF03461 TRCF domain 1052 1134 4.2E-23 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 AMIS_7510 d7368fd6b2eb23546db3ff71bb65b0d6 1205 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 46 1148 27.804 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 AMIS_7510 d7368fd6b2eb23546db3ff71bb65b0d6 1205 SMART SM00487 648 838 4.7E-30 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMIS_7510 d7368fd6b2eb23546db3ff71bb65b0d6 1205 SUPERFAMILY SSF52540 573 831 2.06E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_66890 91b316fd7f3d79ca8e80ca09cd37f1bf 1558 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 572 874 5.6E-27 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain AMIS_66890 91b316fd7f3d79ca8e80ca09cd37f1bf 1558 Gene3D G3DSA:3.40.640.10 1216 1452 7.3E-142 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_66890 91b316fd7f3d79ca8e80ca09cd37f1bf 1558 Pfam PF00550 Phosphopantetheine attachment site 1047 1112 7.0E-7 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain AMIS_66890 91b316fd7f3d79ca8e80ca09cd37f1bf 1558 Pfam PF00698 Acyl transferase domain 571 844 5.5E-41 T 14-10-2018 IPR014043 Acyl transferase AMIS_66890 91b316fd7f3d79ca8e80ca09cd37f1bf 1558 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 291 404 8.7E-33 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal AMIS_66890 91b316fd7f3d79ca8e80ca09cd37f1bf 1558 SUPERFAMILY SSF52151 568 860 1.83E-46 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMIS_66890 91b316fd7f3d79ca8e80ca09cd37f1bf 1558 Pfam PF00155 Aminotransferase class I and II 1201 1543 1.8E-47 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMIS_66890 91b316fd7f3d79ca8e80ca09cd37f1bf 1558 SUPERFAMILY SSF53383 1169 1550 7.07E-103 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_66890 91b316fd7f3d79ca8e80ca09cd37f1bf 1558 SUPERFAMILY SSF55048 701 764 3.92E-10 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AMIS_66890 91b316fd7f3d79ca8e80ca09cd37f1bf 1558 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 409 518 2.1E-12 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AMIS_66890 91b316fd7f3d79ca8e80ca09cd37f1bf 1558 Gene3D G3DSA:1.10.1200.10 1040 1144 5.4E-12 T 14-10-2018 IPR036736 ACP-like superfamily AMIS_66890 91b316fd7f3d79ca8e80ca09cd37f1bf 1558 Gene3D G3DSA:3.40.366.10 570 874 1.9E-87 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 AMIS_66890 91b316fd7f3d79ca8e80ca09cd37f1bf 1558 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 6 283 2.0E-67 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AMIS_66890 91b316fd7f3d79ca8e80ca09cd37f1bf 1558 Gene3D G3DSA:3.30.70.3290 476 917 1.9E-87 T 14-10-2018 AMIS_66890 91b316fd7f3d79ca8e80ca09cd37f1bf 1558 SMART SM00825 Beta-ketoacyl synthase 7 459 2.6E-110 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMIS_66890 91b316fd7f3d79ca8e80ca09cd37f1bf 1558 Gene3D G3DSA:3.90.1150.10 1196 1545 7.3E-142 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMIS_66890 91b316fd7f3d79ca8e80ca09cd37f1bf 1558 SUPERFAMILY SSF47336 1040 1144 6.02E-15 T 14-10-2018 IPR036736 ACP-like superfamily AMIS_66890 91b316fd7f3d79ca8e80ca09cd37f1bf 1558 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 196 212 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site AMIS_66890 91b316fd7f3d79ca8e80ca09cd37f1bf 1558 SUPERFAMILY SSF53901 5 454 3.66E-82 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_66890 91b316fd7f3d79ca8e80ca09cd37f1bf 1558 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 1399 1408 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 AMIS_51050 b3f20695deacfcce56bd0076f773d767 355 Pfam PF00553 Cellulose binding domain 7 106 3.7E-32 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 AMIS_51050 b3f20695deacfcce56bd0076f773d767 355 Gene3D G3DSA:2.60.40.290 1 109 1.0E-36 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 AMIS_51050 b3f20695deacfcce56bd0076f773d767 355 SUPERFAMILY SSF52266 150 350 4.89E-36 T 14-10-2018 AMIS_51050 b3f20695deacfcce56bd0076f773d767 355 Gene3D G3DSA:3.40.50.1110 157 355 3.8E-63 T 14-10-2018 IPR036514 SGNH hydrolase superfamily AMIS_51050 b3f20695deacfcce56bd0076f773d767 355 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 161 340 2.4E-19 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain AMIS_51050 b3f20695deacfcce56bd0076f773d767 355 SMART SM00637 7 106 3.9E-47 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 AMIS_51050 b3f20695deacfcce56bd0076f773d767 355 SUPERFAMILY SSF49384 3 108 2.02E-32 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 AMIS_51050 b3f20695deacfcce56bd0076f773d767 355 ProSitePatterns PS00561 CBM2a (carbohydrate-binding type-2) domain signature. 71 84 - T 14-10-2018 IPR018366 Carbohydrate-binding type-2, conserved site GO:0004553|GO:0005975|GO:0030246 AMIS_50760 5418047000a54bd136caaa2100b2cf92 504 PRINTS PR01036 Tetracycline resistance protein TetB signature 396 415 2.8E-9 T 14-10-2018 AMIS_50760 5418047000a54bd136caaa2100b2cf92 504 PRINTS PR01036 Tetracycline resistance protein TetB signature 258 283 2.8E-9 T 14-10-2018 AMIS_50760 5418047000a54bd136caaa2100b2cf92 504 PRINTS PR01036 Tetracycline resistance protein TetB signature 104 124 2.8E-9 T 14-10-2018 AMIS_50760 5418047000a54bd136caaa2100b2cf92 504 PRINTS PR01036 Tetracycline resistance protein TetB signature 134 158 2.8E-9 T 14-10-2018 AMIS_50760 5418047000a54bd136caaa2100b2cf92 504 PRINTS PR01036 Tetracycline resistance protein TetB signature 333 353 2.8E-9 T 14-10-2018 AMIS_50760 5418047000a54bd136caaa2100b2cf92 504 PRINTS PR01036 Tetracycline resistance protein TetB signature 13 37 2.8E-9 T 14-10-2018 AMIS_50760 5418047000a54bd136caaa2100b2cf92 504 Gene3D G3DSA:1.20.1250.20 263 495 4.7E-15 T 14-10-2018 AMIS_50760 5418047000a54bd136caaa2100b2cf92 504 Gene3D G3DSA:1.20.1720.10 11 218 8.0E-49 T 14-10-2018 AMIS_50760 5418047000a54bd136caaa2100b2cf92 504 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 12 415 4.5E-77 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 AMIS_50760 5418047000a54bd136caaa2100b2cf92 504 SUPERFAMILY SSF103473 5 488 2.62E-70 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_50760 5418047000a54bd136caaa2100b2cf92 504 Pfam PF07690 Major Facilitator Superfamily 14 405 1.1E-50 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_4960 23e1a23d798bc0de53ff1de5e1d45eea 118 Gene3D G3DSA:3.10.450.50 9 116 6.3E-22 T 14-10-2018 AMIS_4960 23e1a23d798bc0de53ff1de5e1d45eea 118 Pfam PF12680 SnoaL-like domain 15 84 3.1E-9 T 14-10-2018 IPR037401 SnoaL-like domain AMIS_4960 23e1a23d798bc0de53ff1de5e1d45eea 118 SUPERFAMILY SSF54427 8 115 9.83E-21 T 14-10-2018 IPR032710 NTF2-like domain superfamily AMIS_78680 4a07226ec62c8194343cdf5addbc3e29 556 Pfam PF05960 Bacterial protein of unknown function (DUF885) 20 552 3.8E-158 T 14-10-2018 IPR010281 Protein of unknown function DUF885 AMIS_23490 7bd8d0bf80a00c75b0092621dacb1d9b 292 Gene3D G3DSA:1.10.3720.10 47 289 5.3E-60 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_23490 7bd8d0bf80a00c75b0092621dacb1d9b 292 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 279 7.7E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_23490 7bd8d0bf80a00c75b0092621dacb1d9b 292 SUPERFAMILY SSF161098 52 280 3.79E-49 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_25970 2276de1d9c7ae2862d9a19be771afa86 284 SUPERFAMILY SSF51735 3 249 2.73E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_25970 2276de1d9c7ae2862d9a19be771afa86 284 Gene3D G3DSA:3.90.25.10 138 269 1.3E-80 T 14-10-2018 AMIS_25970 2276de1d9c7ae2862d9a19be771afa86 284 Gene3D G3DSA:3.40.50.720 4 268 1.3E-80 T 14-10-2018 AMIS_25970 2276de1d9c7ae2862d9a19be771afa86 284 Pfam PF05368 NmrA-like family 3 218 3.7E-15 T 14-10-2018 IPR008030 NmrA-like domain Reactome: R-HSA-70635 AMIS_22590 df7dc5055fea59fbc68b6a6815a3ffd2 459 Gene3D G3DSA:3.90.1150.10 11 453 4.5E-174 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMIS_22590 df7dc5055fea59fbc68b6a6815a3ffd2 459 Gene3D G3DSA:3.40.640.10 62 312 4.5E-174 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_22590 df7dc5055fea59fbc68b6a6815a3ffd2 459 Pfam PF01212 Beta-eliminating lyase 50 425 1.0E-66 T 14-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 AMIS_22590 df7dc5055fea59fbc68b6a6815a3ffd2 459 SUPERFAMILY SSF53383 8 458 1.53E-101 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_6650 7c9fa61adb3f98444dc1219078f46c93 483 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 234 477 2.2E-47 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AMIS_6650 7c9fa61adb3f98444dc1219078f46c93 483 Pfam PF01256 Carbohydrate kinase 246 465 2.2E-54 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AMIS_6650 7c9fa61adb3f98444dc1219078f46c93 483 Pfam PF03853 YjeF-related protein N-terminus 25 188 2.4E-34 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AMIS_6650 7c9fa61adb3f98444dc1219078f46c93 483 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 421 431 - T 14-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site AMIS_6650 7c9fa61adb3f98444dc1219078f46c93 483 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 222 483 19.891 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AMIS_6650 7c9fa61adb3f98444dc1219078f46c93 483 Gene3D G3DSA:3.40.50.10260 2 214 1.3E-44 T 14-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 AMIS_6650 7c9fa61adb3f98444dc1219078f46c93 483 Gene3D G3DSA:3.40.1190.20 220 483 1.3E-73 T 14-10-2018 IPR029056 Ribokinase-like AMIS_6650 7c9fa61adb3f98444dc1219078f46c93 483 SUPERFAMILY SSF64153 5 243 4.05E-45 T 14-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 AMIS_6650 7c9fa61adb3f98444dc1219078f46c93 483 SUPERFAMILY SSF53613 224 481 1.56E-54 T 14-10-2018 IPR029056 Ribokinase-like AMIS_6650 7c9fa61adb3f98444dc1219078f46c93 483 PIRSF PIRSF017184 3 483 2.7E-92 T 14-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 AMIS_6650 7c9fa61adb3f98444dc1219078f46c93 483 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 1 209 18.908 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AMIS_43210 4b6551f552ef3cd6634a1c0784b23de8 183 SUPERFAMILY SSF88659 118 182 6.98E-13 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_43210 4b6551f552ef3cd6634a1c0784b23de8 183 Gene3D G3DSA:1.10.10.10 117 183 4.7E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_43210 4b6551f552ef3cd6634a1c0784b23de8 183 Gene3D G3DSA:1.10.1740.10 9 94 4.7E-25 T 14-10-2018 AMIS_43210 4b6551f552ef3cd6634a1c0784b23de8 183 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 24 182 1.7E-23 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_43210 4b6551f552ef3cd6634a1c0784b23de8 183 Pfam PF08281 Sigma-70, region 4 127 178 5.1E-13 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_43210 4b6551f552ef3cd6634a1c0784b23de8 183 SUPERFAMILY SSF88946 5 117 3.53E-24 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_43210 4b6551f552ef3cd6634a1c0784b23de8 183 Pfam PF04542 Sigma-70 region 2 28 98 3.8E-10 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_1440 43e0319744179a23db864897e6fc7977 389 SUPERFAMILY SSF52242 268 341 5.97E-6 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 AMIS_1440 43e0319744179a23db864897e6fc7977 389 SMART SM00422 6 75 5.2E-5 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_1440 43e0319744179a23db864897e6fc7977 389 Gene3D G3DSA:3.40.50.280 269 380 4.6E-15 T 14-10-2018 AMIS_1440 43e0319744179a23db864897e6fc7977 389 Gene3D G3DSA:1.10.1240.10 191 264 2.4E-6 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMIS_1440 43e0319744179a23db864897e6fc7977 389 Pfam PF02607 B12 binding domain 192 262 4.4E-6 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMIS_1440 43e0319744179a23db864897e6fc7977 389 SUPERFAMILY SSF46955 7 73 1.1E-11 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily AMIS_1440 43e0319744179a23db864897e6fc7977 389 Gene3D G3DSA:1.10.1660.10 2 74 3.0E-18 T 14-10-2018 AMIS_1440 43e0319744179a23db864897e6fc7977 389 Pfam PF13411 MerR HTH family regulatory protein 7 69 8.5E-14 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_8060 cdcd9bda04c9c5a48ba8f8cba54e9cd5 831 SMART SM00267 369 549 2.0E-23 T 14-10-2018 IPR000160 GGDEF domain AMIS_8060 cdcd9bda04c9c5a48ba8f8cba54e9cd5 831 Pfam PF00563 EAL domain 566 801 1.4E-69 T 14-10-2018 IPR001633 EAL domain AMIS_8060 cdcd9bda04c9c5a48ba8f8cba54e9cd5 831 SMART SM00052 560 806 4.9E-88 T 14-10-2018 IPR001633 EAL domain AMIS_8060 cdcd9bda04c9c5a48ba8f8cba54e9cd5 831 SUPERFAMILY SSF55073 385 543 3.92E-28 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_8060 cdcd9bda04c9c5a48ba8f8cba54e9cd5 831 SUPERFAMILY SSF141868 574 813 6.54E-79 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_8060 cdcd9bda04c9c5a48ba8f8cba54e9cd5 831 Gene3D G3DSA:3.20.20.450 561 822 3.5E-87 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_8060 cdcd9bda04c9c5a48ba8f8cba54e9cd5 831 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 381 542 1.3E-23 T 14-10-2018 IPR000160 GGDEF domain AMIS_8060 cdcd9bda04c9c5a48ba8f8cba54e9cd5 831 Gene3D G3DSA:3.30.70.270 366 547 9.1E-36 T 14-10-2018 AMIS_8060 cdcd9bda04c9c5a48ba8f8cba54e9cd5 831 Pfam PF00990 Diguanylate cyclase, GGDEF domain 381 542 4.7E-29 T 14-10-2018 IPR000160 GGDEF domain AMIS_1420 9877ccbf8f8a478366fb6a655ce94e61 132 Pfam PF03061 Thioesterase superfamily 42 121 4.0E-12 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AMIS_1420 9877ccbf8f8a478366fb6a655ce94e61 132 SUPERFAMILY SSF54637 13 130 1.18E-24 T 14-10-2018 IPR029069 HotDog domain superfamily AMIS_1420 9877ccbf8f8a478366fb6a655ce94e61 132 Gene3D G3DSA:3.10.129.10 2 131 2.4E-41 T 14-10-2018 AMIS_1420 9877ccbf8f8a478366fb6a655ce94e61 132 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 13 128 1.1E-24 T 14-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 AMIS_75640 b3007cbc3dd5694e3307aa77fc42fe9b 267 Gene3D G3DSA:1.10.10.10 1 83 3.5E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_75640 b3007cbc3dd5694e3307aa77fc42fe9b 267 PIRSF PIRSF020623 1 263 6.4E-61 T 14-10-2018 IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX GO:0006351 AMIS_75640 b3007cbc3dd5694e3307aa77fc42fe9b 267 Pfam PF08223 PaaX-like protein C-terminal domain 157 250 1.0E-27 T 14-10-2018 IPR013225 PaaX-like, C-terminal AMIS_75640 b3007cbc3dd5694e3307aa77fc42fe9b 267 Gene3D G3DSA:1.20.58.1460 180 259 5.7E-7 T 14-10-2018 AMIS_75640 b3007cbc3dd5694e3307aa77fc42fe9b 267 Pfam PF07848 PaaX-like protein 3 70 2.8E-18 T 14-10-2018 IPR012906 PaaX-like, N-terminal AMIS_76600 c22c582aeb1282b2fd49172b3303213e 359 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 359 75.771 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMIS_76600 c22c582aeb1282b2fd49172b3303213e 359 Gene3D G3DSA:3.30.465.10 88 240 2.5E-46 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AMIS_76600 c22c582aeb1282b2fd49172b3303213e 359 Gene3D G3DSA:3.30.43.10 11 85 1.0E-12 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 AMIS_76600 c22c582aeb1282b2fd49172b3303213e 359 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 23 351 5.2E-47 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMIS_76600 c22c582aeb1282b2fd49172b3303213e 359 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 230 355 2.5E-35 T 14-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMIS_76600 c22c582aeb1282b2fd49172b3303213e 359 SUPERFAMILY SSF56176 22 201 8.88E-38 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AMIS_76600 c22c582aeb1282b2fd49172b3303213e 359 SUPERFAMILY SSF56194 230 356 5.23E-31 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMIS_76600 c22c582aeb1282b2fd49172b3303213e 359 Pfam PF01565 FAD binding domain 43 162 5.2E-22 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AMIS_76600 c22c582aeb1282b2fd49172b3303213e 359 Gene3D G3DSA:3.90.78.10 246 359 2.6E-35 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMIS_55700 4b4042382c04746fd4811f9217aa35c2 334 Gene3D G3DSA:3.40.50.2300 159 322 3.9E-72 T 14-10-2018 AMIS_55700 4b4042382c04746fd4811f9217aa35c2 334 Pfam PF13377 Periplasmic binding protein-like domain 168 327 6.1E-37 T 14-10-2018 AMIS_55700 4b4042382c04746fd4811f9217aa35c2 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 1 19 - T 14-10-2018 AMIS_55700 4b4042382c04746fd4811f9217aa35c2 334 SUPERFAMILY SSF47413 1 56 1.16E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_55700 4b4042382c04746fd4811f9217aa35c2 334 Gene3D G3DSA:3.40.50.2300 74 318 3.9E-72 T 14-10-2018 AMIS_55700 4b4042382c04746fd4811f9217aa35c2 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 1 45 5.5E-20 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_55700 4b4042382c04746fd4811f9217aa35c2 334 Gene3D G3DSA:1.10.260.40 1 55 5.2E-23 T 14-10-2018 AMIS_55700 4b4042382c04746fd4811f9217aa35c2 334 SUPERFAMILY SSF53822 56 310 3.03E-57 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_55700 4b4042382c04746fd4811f9217aa35c2 334 SMART SM00354 1 68 8.1E-27 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_16690 612a4cbfbd062a85f32d5a7858722df1 234 Gene3D G3DSA:3.40.50.720 2 234 7.0E-81 T 14-10-2018 AMIS_16690 612a4cbfbd062a85f32d5a7858722df1 234 SUPERFAMILY SSF51735 3 230 2.63E-77 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_16690 612a4cbfbd062a85f32d5a7858722df1 234 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 230 1.7E-57 T 14-10-2018 AMIS_16690 612a4cbfbd062a85f32d5a7858722df1 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 67 78 6.9E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_16690 612a4cbfbd062a85f32d5a7858722df1 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 194 214 6.9E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_16690 612a4cbfbd062a85f32d5a7858722df1 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 6.9E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_16690 612a4cbfbd062a85f32d5a7858722df1 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 159 6.9E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_16690 612a4cbfbd062a85f32d5a7858722df1 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 178 6.9E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_16690 612a4cbfbd062a85f32d5a7858722df1 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 114 130 6.9E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_16690 612a4cbfbd062a85f32d5a7858722df1 234 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 67 78 9.5E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_16690 612a4cbfbd062a85f32d5a7858722df1 234 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 159 9.5E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_16690 612a4cbfbd062a85f32d5a7858722df1 234 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 120 128 9.5E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_16690 612a4cbfbd062a85f32d5a7858722df1 234 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 176 5.0E-7 T 14-10-2018 AMIS_45970 7213b0ef0ab32c9029857020a019e058 286 SUPERFAMILY SSF102114 16 244 1.96E-14 T 14-10-2018 AMIS_45970 7213b0ef0ab32c9029857020a019e058 286 Gene3D G3DSA:3.20.20.70 12 256 3.6E-6 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_52460 3e35915ed17ae1901ce4d8073bfc9890 651 SUPERFAMILY SSF52172 261 395 2.99E-12 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_52460 3e35915ed17ae1901ce4d8073bfc9890 651 SUPERFAMILY SSF55874 496 645 2.36E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_52460 3e35915ed17ae1901ce4d8073bfc9890 651 SMART SM00388 427 496 2.3E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_52460 3e35915ed17ae1901ce4d8073bfc9890 651 Pfam PF00512 His Kinase A (phospho-acceptor) domain 429 494 6.2E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_52460 3e35915ed17ae1901ce4d8073bfc9890 651 Gene3D G3DSA:3.30.565.10 499 646 1.8E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_52460 3e35915ed17ae1901ce4d8073bfc9890 651 SMART SM00387 537 645 1.1E-31 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_52460 3e35915ed17ae1901ce4d8073bfc9890 651 Pfam PF00072 Response regulator receiver domain 5 111 1.2E-16 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_52460 3e35915ed17ae1901ce4d8073bfc9890 651 Pfam PF00072 Response regulator receiver domain 130 240 1.8E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_52460 3e35915ed17ae1901ce4d8073bfc9890 651 SMART SM00448 3 114 9.5E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_52460 3e35915ed17ae1901ce4d8073bfc9890 651 SMART SM00448 128 241 2.0E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_52460 3e35915ed17ae1901ce4d8073bfc9890 651 SMART SM00448 264 374 0.2 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_52460 3e35915ed17ae1901ce4d8073bfc9890 651 SUPERFAMILY SSF47384 410 497 7.85E-15 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_52460 3e35915ed17ae1901ce4d8073bfc9890 651 SUPERFAMILY SSF52172 3 119 6.26E-27 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_52460 3e35915ed17ae1901ce4d8073bfc9890 651 Gene3D G3DSA:1.10.287.130 415 498 4.2E-12 T 14-10-2018 AMIS_52460 3e35915ed17ae1901ce4d8073bfc9890 651 PRINTS PR00344 Bacterial sensor protein C-terminal signature 605 623 1.4E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_52460 3e35915ed17ae1901ce4d8073bfc9890 651 PRINTS PR00344 Bacterial sensor protein C-terminal signature 572 586 1.4E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_52460 3e35915ed17ae1901ce4d8073bfc9890 651 PRINTS PR00344 Bacterial sensor protein C-terminal signature 590 600 1.4E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_52460 3e35915ed17ae1901ce4d8073bfc9890 651 PRINTS PR00344 Bacterial sensor protein C-terminal signature 629 642 1.4E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_52460 3e35915ed17ae1901ce4d8073bfc9890 651 SUPERFAMILY SSF52172 126 252 2.13E-31 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_52460 3e35915ed17ae1901ce4d8073bfc9890 651 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 537 644 1.8E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_52460 3e35915ed17ae1901ce4d8073bfc9890 651 Gene3D G3DSA:3.40.50.12740 1 128 9.1E-24 T 14-10-2018 AMIS_52460 3e35915ed17ae1901ce4d8073bfc9890 651 Gene3D G3DSA:3.40.50.12740 129 389 4.1E-48 T 14-10-2018 AMIS_8150 ab10689035709e788ad9693eca5329af 384 SUPERFAMILY SSF47203 231 383 3.38E-59 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMIS_8150 ab10689035709e788ad9693eca5329af 384 PIRSF PIRSF016578 119 383 1.1E-16 T 14-10-2018 AMIS_8150 ab10689035709e788ad9693eca5329af 384 PIRSF PIRSF016578 2 99 1.2E-7 T 14-10-2018 AMIS_8150 ab10689035709e788ad9693eca5329af 384 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 232 382 2.2E-51 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMIS_8150 ab10689035709e788ad9693eca5329af 384 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 11 121 2.9E-28 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMIS_8150 ab10689035709e788ad9693eca5329af 384 Gene3D G3DSA:1.10.540.10 12 123 1.4E-35 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMIS_8150 ab10689035709e788ad9693eca5329af 384 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 125 220 1.9E-28 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMIS_8150 ab10689035709e788ad9693eca5329af 384 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 340 359 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AMIS_8150 ab10689035709e788ad9693eca5329af 384 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 127 139 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AMIS_8150 ab10689035709e788ad9693eca5329af 384 Gene3D G3DSA:1.20.140.10 238 384 3.5E-57 T 14-10-2018 AMIS_8150 ab10689035709e788ad9693eca5329af 384 SUPERFAMILY SSF56645 8 244 1.57E-80 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMIS_8150 ab10689035709e788ad9693eca5329af 384 Gene3D G3DSA:2.40.110.10 125 237 3.5E-44 T 14-10-2018 AMIS_22490 a00461a47416dae34e166ab2c03dcbd3 404 PRINTS PR00359 B-class P450 signature 153 168 2.5E-46 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_22490 a00461a47416dae34e166ab2c03dcbd3 404 PRINTS PR00359 B-class P450 signature 191 213 2.5E-46 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_22490 a00461a47416dae34e166ab2c03dcbd3 404 PRINTS PR00359 B-class P450 signature 274 285 2.5E-46 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_22490 a00461a47416dae34e166ab2c03dcbd3 404 PRINTS PR00359 B-class P450 signature 341 350 2.5E-46 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_22490 a00461a47416dae34e166ab2c03dcbd3 404 PRINTS PR00359 B-class P450 signature 292 319 2.5E-46 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_22490 a00461a47416dae34e166ab2c03dcbd3 404 PRINTS PR00359 B-class P450 signature 320 335 2.5E-46 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_22490 a00461a47416dae34e166ab2c03dcbd3 404 PRINTS PR00359 B-class P450 signature 136 152 2.5E-46 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_22490 a00461a47416dae34e166ab2c03dcbd3 404 PRINTS PR00359 B-class P450 signature 350 361 2.5E-46 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_22490 a00461a47416dae34e166ab2c03dcbd3 404 Pfam PF00067 Cytochrome P450 202 370 1.1E-19 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_22490 a00461a47416dae34e166ab2c03dcbd3 404 PRINTS PR00385 P450 superfamily signature 235 252 2.3E-7 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_22490 a00461a47416dae34e166ab2c03dcbd3 404 PRINTS PR00385 P450 superfamily signature 350 361 2.3E-7 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_22490 a00461a47416dae34e166ab2c03dcbd3 404 PRINTS PR00385 P450 superfamily signature 274 285 2.3E-7 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_22490 a00461a47416dae34e166ab2c03dcbd3 404 PRINTS PR00385 P450 superfamily signature 341 350 2.3E-7 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_22490 a00461a47416dae34e166ab2c03dcbd3 404 Gene3D G3DSA:1.10.630.10 7 403 1.1E-117 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_22490 a00461a47416dae34e166ab2c03dcbd3 404 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 343 352 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 AMIS_22490 a00461a47416dae34e166ab2c03dcbd3 404 SUPERFAMILY SSF48264 14 400 8.38E-84 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_57240 e42691f761005bd4ad5ea563269d7476 520 Gene3D G3DSA:3.60.110.10 352 461 8.6E-9 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AMIS_57240 e42691f761005bd4ad5ea563269d7476 520 Gene3D G3DSA:3.60.110.10 3 289 9.8E-56 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AMIS_57240 e42691f761005bd4ad5ea563269d7476 520 SUPERFAMILY SSF56317 314 447 3.66E-11 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AMIS_57240 e42691f761005bd4ad5ea563269d7476 520 Pfam PF00795 Carbon-nitrogen hydrolase 6 262 3.7E-35 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 AMIS_57240 e42691f761005bd4ad5ea563269d7476 520 SUPERFAMILY SSF56317 3 281 1.83E-50 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AMIS_38590 35a6df3987f96aa42be4ab0207484356 258 Gene3D G3DSA:1.10.10.1880 176 249 9.7E-25 T 14-10-2018 AMIS_38590 35a6df3987f96aa42be4ab0207484356 258 Pfam PF01936 NYN domain 8 141 1.4E-31 T 14-10-2018 IPR021139 NYN domain, limkain-b1-type AMIS_38590 35a6df3987f96aa42be4ab0207484356 258 Pfam PF12872 OST-HTH/LOTUS domain 175 239 1.3E-14 T 14-10-2018 IPR025605 OST-HTH/LOTUS domain AMIS_38590 35a6df3987f96aa42be4ab0207484356 258 Gene3D G3DSA:3.40.50.1010 2 146 1.3E-12 T 14-10-2018 AMIS_72710 360f2d77c1773b78d3bb06d18f5148c4 1053 Gene3D G3DSA:2.60.120.10 469 584 1.9E-9 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMIS_72710 360f2d77c1773b78d3bb06d18f5148c4 1053 SMART SM00100 477 594 1.7E-5 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain AMIS_72710 360f2d77c1773b78d3bb06d18f5148c4 1053 SUPERFAMILY SSF51206 478 583 7.46E-10 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like AMIS_63460 9f2be7fafc10363ef069083e88079603 146 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 5 142 2.3E-9 T 14-10-2018 IPR019587 Polyketide cyclase/dehydrase AMIS_63460 9f2be7fafc10363ef069083e88079603 146 Gene3D G3DSA:3.30.530.20 3 146 2.4E-17 T 14-10-2018 IPR023393 START-like domain superfamily AMIS_63460 9f2be7fafc10363ef069083e88079603 146 SUPERFAMILY SSF55961 5 144 6.32E-20 T 14-10-2018 AMIS_48050 19acc24289970875a34ca733c2a3dc25 120 Gene3D G3DSA:1.10.1660.10 2 120 2.0E-31 T 14-10-2018 AMIS_48050 19acc24289970875a34ca733c2a3dc25 120 SMART SM00422 3 72 2.5E-19 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_48050 19acc24289970875a34ca733c2a3dc25 120 Pfam PF13411 MerR HTH family regulatory protein 3 68 1.9E-14 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_48050 19acc24289970875a34ca733c2a3dc25 120 SUPERFAMILY SSF46955 3 116 8.06E-28 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily AMIS_48050 19acc24289970875a34ca733c2a3dc25 120 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 2.0E-8 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_48050 19acc24289970875a34ca733c2a3dc25 120 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 2.0E-8 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_48050 19acc24289970875a34ca733c2a3dc25 120 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 39 59 2.0E-8 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_48050 19acc24289970875a34ca733c2a3dc25 120 ProSitePatterns PS00552 MerR-type HTH domain signature. 6 28 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_13770 bc020e6978e2e61bedc162199238290d 546 Pfam PF13229 Right handed beta helix region 114 252 4.5E-15 T 14-10-2018 IPR039448 Right handed beta helix domain AMIS_13770 bc020e6978e2e61bedc162199238290d 546 SMART SM00710 158 180 85.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMIS_13770 bc020e6978e2e61bedc162199238290d 546 SMART SM00710 181 203 6.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMIS_13770 bc020e6978e2e61bedc162199238290d 546 SMART SM00710 227 249 2800.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMIS_13770 bc020e6978e2e61bedc162199238290d 546 SMART SM00710 135 157 1500.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMIS_13770 bc020e6978e2e61bedc162199238290d 546 SMART SM00710 69 91 1100.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMIS_13770 bc020e6978e2e61bedc162199238290d 546 PRINTS PR00819 CbxX/CfqX superfamily signature 358 372 6.3E-50 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 AMIS_13770 bc020e6978e2e61bedc162199238290d 546 PRINTS PR00819 CbxX/CfqX superfamily signature 425 442 6.3E-50 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 AMIS_13770 bc020e6978e2e61bedc162199238290d 546 PRINTS PR00819 CbxX/CfqX superfamily signature 499 511 6.3E-50 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 AMIS_13770 bc020e6978e2e61bedc162199238290d 546 PRINTS PR00819 CbxX/CfqX superfamily signature 280 294 6.3E-50 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 AMIS_13770 bc020e6978e2e61bedc162199238290d 546 PRINTS PR00819 CbxX/CfqX superfamily signature 442 461 6.3E-50 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 AMIS_13770 bc020e6978e2e61bedc162199238290d 546 PRINTS PR00819 CbxX/CfqX superfamily signature 320 335 6.3E-50 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 AMIS_13770 bc020e6978e2e61bedc162199238290d 546 PRINTS PR00819 CbxX/CfqX superfamily signature 372 391 6.3E-50 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 AMIS_13770 bc020e6978e2e61bedc162199238290d 546 PRINTS PR00819 CbxX/CfqX superfamily signature 404 416 6.3E-50 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 AMIS_13770 bc020e6978e2e61bedc162199238290d 546 Gene3D G3DSA:1.10.8.60 455 544 2.7E-15 T 14-10-2018 AMIS_13770 bc020e6978e2e61bedc162199238290d 546 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 321 454 7.8E-19 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMIS_13770 bc020e6978e2e61bedc162199238290d 546 Gene3D G3DSA:2.160.20.10 11 264 7.1E-18 T 14-10-2018 IPR012334 Pectin lyase fold AMIS_13770 bc020e6978e2e61bedc162199238290d 546 Gene3D G3DSA:3.40.50.300 265 454 1.1E-55 T 14-10-2018 AMIS_13770 bc020e6978e2e61bedc162199238290d 546 SUPERFAMILY SSF52540 280 510 9.08E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_13770 bc020e6978e2e61bedc162199238290d 546 SMART SM00382 317 457 3.1E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_13770 bc020e6978e2e61bedc162199238290d 546 SUPERFAMILY SSF51126 8 239 4.8E-29 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor AMIS_77170 f4a391966207303afa43b0d3459c56bd 261 SMART SM00420 6 58 5.7E-16 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AMIS_77170 f4a391966207303afa43b0d3459c56bd 261 Gene3D G3DSA:3.40.50.1360 71 238 5.9E-8 T 14-10-2018 AMIS_77170 f4a391966207303afa43b0d3459c56bd 261 SMART SM01134 72 242 1.5E-59 T 14-10-2018 AMIS_77170 f4a391966207303afa43b0d3459c56bd 261 SUPERFAMILY SSF100950 74 243 9.21E-30 T 14-10-2018 IPR037171 NagB/RpiA transferase-like AMIS_77170 f4a391966207303afa43b0d3459c56bd 261 Gene3D G3DSA:1.10.10.10 1 57 1.5E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_77170 f4a391966207303afa43b0d3459c56bd 261 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 5.6E-18 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AMIS_77170 f4a391966207303afa43b0d3459c56bd 261 SUPERFAMILY SSF46785 6 65 1.55E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_77170 f4a391966207303afa43b0d3459c56bd 261 Pfam PF00455 DeoR C terminal sensor domain 74 241 5.0E-47 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain AMIS_77170 f4a391966207303afa43b0d3459c56bd 261 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AMIS_77170 f4a391966207303afa43b0d3459c56bd 261 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 5.7E-8 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AMIS_77170 f4a391966207303afa43b0d3459c56bd 261 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 5.7E-8 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AMIS_81230 0ae278d1430f89b2f5452af68519a989 85 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 4 72 23.774 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor AMIS_81230 0ae278d1430f89b2f5452af68519a989 85 Pfam PF01809 Haemolytic domain 6 71 3.1E-28 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor AMIS_81230 0ae278d1430f89b2f5452af68519a989 85 SMART SM01234 4 71 4.0E-40 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor AMIS_81230 0ae278d1430f89b2f5452af68519a989 85 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 8 76 3.0E-26 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor AMIS_81230 0ae278d1430f89b2f5452af68519a989 85 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 19 71 2.0E-16 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor AMIS_68230 bba6098e1728953c4edca48016cd22a5 166 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 14 36 - T 14-10-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 AMIS_68230 bba6098e1728953c4edca48016cd22a5 166 Pfam PF00186 Dihydrofolate reductase 3 153 3.2E-44 T 14-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AMIS_68230 bba6098e1728953c4edca48016cd22a5 166 PIRSF PIRSF000194 1 158 5.9E-46 T 14-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 AMIS_68230 bba6098e1728953c4edca48016cd22a5 166 PRINTS PR00070 Dihydrofolate reductase signature 41 52 7.2E-13 T 14-10-2018 AMIS_68230 bba6098e1728953c4edca48016cd22a5 166 PRINTS PR00070 Dihydrofolate reductase signature 90 104 7.2E-13 T 14-10-2018 AMIS_68230 bba6098e1728953c4edca48016cd22a5 166 PRINTS PR00070 Dihydrofolate reductase signature 28 36 7.2E-13 T 14-10-2018 AMIS_68230 bba6098e1728953c4edca48016cd22a5 166 PRINTS PR00070 Dihydrofolate reductase signature 14 24 7.2E-13 T 14-10-2018 AMIS_68230 bba6098e1728953c4edca48016cd22a5 166 SUPERFAMILY SSF53597 1 156 4.49E-48 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AMIS_68230 bba6098e1728953c4edca48016cd22a5 166 Gene3D G3DSA:3.40.430.10 1 157 4.0E-47 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AMIS_5480 15565d00e9f5710d53aa6e11b708b1cb 373 Gene3D G3DSA:3.40.1160.10 2 268 3.3E-78 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AMIS_5480 15565d00e9f5710d53aa6e11b708b1cb 373 Gene3D G3DSA:2.30.130.10 271 373 4.5E-28 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 AMIS_5480 15565d00e9f5710d53aa6e11b708b1cb 373 Hamap MF_00456 Glutamate 5-kinase [proB]. 12 268 34.821 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AMIS_5480 15565d00e9f5710d53aa6e11b708b1cb 373 SMART SM00359 281 365 2.8E-12 T 14-10-2018 IPR002478 PUA domain GO:0003723 AMIS_5480 15565d00e9f5710d53aa6e11b708b1cb 373 ProSitePatterns PS00902 Glutamate 5-kinase signature. 214 231 - T 14-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AMIS_5480 15565d00e9f5710d53aa6e11b708b1cb 373 SUPERFAMILY SSF53633 12 259 1.03E-58 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AMIS_5480 15565d00e9f5710d53aa6e11b708b1cb 373 PRINTS PR00474 Glutamate 5-kinase family signature 123 144 4.4E-53 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AMIS_5480 15565d00e9f5710d53aa6e11b708b1cb 373 PRINTS PR00474 Glutamate 5-kinase family signature 155 182 4.4E-53 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AMIS_5480 15565d00e9f5710d53aa6e11b708b1cb 373 PRINTS PR00474 Glutamate 5-kinase family signature 83 111 4.4E-53 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AMIS_5480 15565d00e9f5710d53aa6e11b708b1cb 373 PRINTS PR00474 Glutamate 5-kinase family signature 216 236 4.4E-53 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AMIS_5480 15565d00e9f5710d53aa6e11b708b1cb 373 PRINTS PR00474 Glutamate 5-kinase family signature 49 63 4.4E-53 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AMIS_5480 15565d00e9f5710d53aa6e11b708b1cb 373 Pfam PF00696 Amino acid kinase family 13 241 4.7E-40 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AMIS_5480 15565d00e9f5710d53aa6e11b708b1cb 373 SUPERFAMILY SSF88697 280 372 7.18E-21 T 14-10-2018 IPR015947 PUA-like superfamily AMIS_5480 15565d00e9f5710d53aa6e11b708b1cb 373 PIRSF PIRSF000729 7 373 8.5E-121 T 14-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 AMIS_5480 15565d00e9f5710d53aa6e11b708b1cb 373 Pfam PF01472 PUA domain 281 347 7.8E-17 T 14-10-2018 IPR002478 PUA domain GO:0003723 AMIS_5480 15565d00e9f5710d53aa6e11b708b1cb 373 TIGRFAM TIGR01027 proB: glutamate 5-kinase 12 371 4.9E-120 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AMIS_63090 a561aa9be65260aa1d6aab3a47c0f46c 156 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 31 147 1.6E-35 T 14-10-2018 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III AMIS_8580 a655f0ed9eff471d476c7ab4c9e1783f 168 Gene3D G3DSA:3.30.2010.20 54 168 3.0E-13 T 14-10-2018 IPR038555 Zincin-like metallopeptidase superfamily AMIS_8580 a655f0ed9eff471d476c7ab4c9e1783f 168 Pfam PF06262 Zincin-like metallopeptidase 81 167 6.7E-13 T 14-10-2018 IPR010428 Zincin-like metallopeptidase AMIS_8580 a655f0ed9eff471d476c7ab4c9e1783f 168 SUPERFAMILY SSF55486 56 167 1.39E-27 T 14-10-2018 AMIS_16540 546bbde744a48e5d1ed6fee4424e85dc 1064 Pfam PF11852 Domain of unknown function (DUF3372) 908 1063 2.0E-48 T 14-10-2018 IPR024561 Alpha-1,6-glucosidases, pullulanase-type, C-terminal AMIS_16540 546bbde744a48e5d1ed6fee4424e85dc 1064 Gene3D G3DSA:2.60.40.1110 116 219 4.1E-22 T 14-10-2018 AMIS_16540 546bbde744a48e5d1ed6fee4424e85dc 1064 Gene3D G3DSA:2.60.40.1110 17 115 3.3E-22 T 14-10-2018 AMIS_16540 546bbde744a48e5d1ed6fee4424e85dc 1064 Pfam PF03714 Bacterial pullanase-associated domain 126 216 5.6E-16 T 14-10-2018 IPR005323 Pullulanase, carbohydrate-binding module 41 GO:0005975|GO:0030246 AMIS_16540 546bbde744a48e5d1ed6fee4424e85dc 1064 Pfam PF03714 Bacterial pullanase-associated domain 23 113 8.0E-20 T 14-10-2018 IPR005323 Pullulanase, carbohydrate-binding module 41 GO:0005975|GO:0030246 AMIS_16540 546bbde744a48e5d1ed6fee4424e85dc 1064 SUPERFAMILY SSF49452 123 216 1.57E-23 T 14-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 AMIS_16540 546bbde744a48e5d1ed6fee4424e85dc 1064 SUPERFAMILY SSF81296 340 446 4.48E-19 T 14-10-2018 IPR014756 Immunoglobulin E-set AMIS_16540 546bbde744a48e5d1ed6fee4424e85dc 1064 Gene3D G3DSA:2.60.40.1130 234 333 3.9E-17 T 14-10-2018 AMIS_16540 546bbde744a48e5d1ed6fee4424e85dc 1064 Gene3D G3DSA:2.60.40.1180 997 1064 5.5E-13 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta AMIS_16540 546bbde744a48e5d1ed6fee4424e85dc 1064 Gene3D G3DSA:2.60.40.10 335 442 3.2E-27 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_16540 546bbde744a48e5d1ed6fee4424e85dc 1064 SUPERFAMILY SSF51445 441 964 1.42E-113 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_16540 546bbde744a48e5d1ed6fee4424e85dc 1064 TIGRFAM TIGR02103 pullul_strch: alpha-1,6-glucosidases, pullulanase-type 260 1063 3.3E-284 T 14-10-2018 IPR011839 Alpha-1,6-glucosidases, pullulanase-type GO:0005975|GO:0051060 AMIS_16540 546bbde744a48e5d1ed6fee4424e85dc 1064 SUPERFAMILY SSF81296 231 334 1.13E-15 T 14-10-2018 IPR014756 Immunoglobulin E-set AMIS_16540 546bbde744a48e5d1ed6fee4424e85dc 1064 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 343 428 2.0E-10 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 AMIS_16540 546bbde744a48e5d1ed6fee4424e85dc 1064 Gene3D G3DSA:3.20.20.80 443 996 5.3E-198 T 14-10-2018 AMIS_16540 546bbde744a48e5d1ed6fee4424e85dc 1064 SUPERFAMILY SSF51011 968 1062 9.35E-23 T 14-10-2018 AMIS_16540 546bbde744a48e5d1ed6fee4424e85dc 1064 SUPERFAMILY SSF49452 20 115 1.14E-23 T 14-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 AMIS_38410 ae483ea1393f3cb81be3fb03dca7c611 286 SUPERFAMILY SSF51735 4 273 8.21E-64 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_38410 ae483ea1393f3cb81be3fb03dca7c611 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 1.6E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_38410 ae483ea1393f3cb81be3fb03dca7c611 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 1.6E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_38410 ae483ea1393f3cb81be3fb03dca7c611 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 1.6E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_38410 ae483ea1393f3cb81be3fb03dca7c611 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 1.6E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_38410 ae483ea1393f3cb81be3fb03dca7c611 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 1.6E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_38410 ae483ea1393f3cb81be3fb03dca7c611 286 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMIS_38410 ae483ea1393f3cb81be3fb03dca7c611 286 Gene3D G3DSA:3.40.50.720 1 274 2.1E-69 T 14-10-2018 AMIS_38410 ae483ea1393f3cb81be3fb03dca7c611 286 Pfam PF00106 short chain dehydrogenase 10 197 4.6E-47 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_38410 ae483ea1393f3cb81be3fb03dca7c611 286 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 193 6.3E-4 T 14-10-2018 AMIS_38410 ae483ea1393f3cb81be3fb03dca7c611 286 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 3.7E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_38410 ae483ea1393f3cb81be3fb03dca7c611 286 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 3.7E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_38410 ae483ea1393f3cb81be3fb03dca7c611 286 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 3.7E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_79100 cd2acfb8413f7653c07b250621ae868f 490 Gene3D G3DSA:2.150.10.10 82 174 2.0E-12 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_79100 cd2acfb8413f7653c07b250621ae868f 490 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 207 225 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site AMIS_79100 cd2acfb8413f7653c07b250621ae868f 490 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 319 337 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site AMIS_79100 cd2acfb8413f7653c07b250621ae868f 490 SUPERFAMILY SSF51120 341 482 4.32E-16 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_79100 cd2acfb8413f7653c07b250621ae868f 490 SUPERFAMILY SSF51120 237 343 1.28E-14 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_79100 cd2acfb8413f7653c07b250621ae868f 490 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 138 155 0.0087 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_79100 cd2acfb8413f7653c07b250621ae868f 490 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 210 227 2.9 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_79100 cd2acfb8413f7653c07b250621ae868f 490 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 436 453 0.013 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_79100 cd2acfb8413f7653c07b250621ae868f 490 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 401 412 0.32 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_79100 cd2acfb8413f7653c07b250621ae868f 490 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 304 321 0.0073 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_79100 cd2acfb8413f7653c07b250621ae868f 490 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 121 135 13.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_79100 cd2acfb8413f7653c07b250621ae868f 490 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 193 209 1.1 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_79100 cd2acfb8413f7653c07b250621ae868f 490 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 287 298 0.05 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_79100 cd2acfb8413f7653c07b250621ae868f 490 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 322 338 0.11 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_79100 cd2acfb8413f7653c07b250621ae868f 490 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 351 363 31.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_79100 cd2acfb8413f7653c07b250621ae868f 490 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 157 173 0.0041 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_79100 cd2acfb8413f7653c07b250621ae868f 490 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 419 434 0.013 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_79100 cd2acfb8413f7653c07b250621ae868f 490 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 174 190 41.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_79100 cd2acfb8413f7653c07b250621ae868f 490 PRINTS PR00313 NodO calcium binding signature 305 314 8.9E-9 T 14-10-2018 AMIS_79100 cd2acfb8413f7653c07b250621ae868f 490 PRINTS PR00313 NodO calcium binding signature 148 156 8.9E-9 T 14-10-2018 AMIS_79100 cd2acfb8413f7653c07b250621ae868f 490 PRINTS PR00313 NodO calcium binding signature 118 129 8.9E-9 T 14-10-2018 AMIS_79100 cd2acfb8413f7653c07b250621ae868f 490 PRINTS PR00313 NodO calcium binding signature 287 295 8.9E-9 T 14-10-2018 AMIS_79100 cd2acfb8413f7653c07b250621ae868f 490 Gene3D G3DSA:2.150.10.10 175 280 5.1E-11 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_79100 cd2acfb8413f7653c07b250621ae868f 490 Gene3D G3DSA:2.150.10.10 281 396 9.0E-15 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_79100 cd2acfb8413f7653c07b250621ae868f 490 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 153 171 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site AMIS_79100 cd2acfb8413f7653c07b250621ae868f 490 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 135 153 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site AMIS_79100 cd2acfb8413f7653c07b250621ae868f 490 SUPERFAMILY SSF51120 120 254 2.09E-19 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_79100 cd2acfb8413f7653c07b250621ae868f 490 Gene3D G3DSA:2.150.10.10 397 483 3.2E-13 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_73130 56874db19a40ba238bb35f14fe1ca5c1 416 Pfam PF00754 F5/8 type C domain 44 157 5.8E-20 T 14-10-2018 IPR000421 Coagulation factor 5/8 C-terminal domain AMIS_73130 56874db19a40ba238bb35f14fe1ca5c1 416 Gene3D G3DSA:2.60.120.260 35 162 1.5E-27 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_73130 56874db19a40ba238bb35f14fe1ca5c1 416 SUPERFAMILY SSF49785 39 163 4.25E-22 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_73130 56874db19a40ba238bb35f14fe1ca5c1 416 SUPERFAMILY SSF53955 185 414 1.38E-76 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily AMIS_73130 56874db19a40ba238bb35f14fe1ca5c1 416 Pfam PF01374 Glycosyl hydrolase family 46 198 403 1.2E-89 T 14-10-2018 IPR000400 Glycoside hydrolase, family 46 GO:0005576|GO:0005975|GO:0016977 KEGG: 00520+3.2.1.132 AMIS_73130 56874db19a40ba238bb35f14fe1ca5c1 416 Gene3D G3DSA:1.20.141.10 193 412 1.3E-85 T 14-10-2018 AMIS_73130 56874db19a40ba238bb35f14fe1ca5c1 416 Gene3D G3DSA:3.30.386.10 209 303 1.3E-85 T 14-10-2018 IPR023099 Glycoside hydrolase, family 46, N-terminal GO:0005975|GO:0016977 KEGG: 00520+3.2.1.132 AMIS_31150 37624bd723fdb12c9bef62cffaeca287 727 SUPERFAMILY SSF55073 300 454 1.57E-48 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_31150 37624bd723fdb12c9bef62cffaeca287 727 SMART SM00052 463 707 2.9E-56 T 14-10-2018 IPR001633 EAL domain AMIS_31150 37624bd723fdb12c9bef62cffaeca287 727 SUPERFAMILY SSF141868 470 715 4.32E-60 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_31150 37624bd723fdb12c9bef62cffaeca287 727 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 294 452 5.4E-42 T 14-10-2018 IPR000160 GGDEF domain AMIS_31150 37624bd723fdb12c9bef62cffaeca287 727 Gene3D G3DSA:3.20.20.450 466 719 6.5E-69 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_31150 37624bd723fdb12c9bef62cffaeca287 727 Pfam PF00990 Diguanylate cyclase, GGDEF domain 295 448 5.2E-45 T 14-10-2018 IPR000160 GGDEF domain AMIS_31150 37624bd723fdb12c9bef62cffaeca287 727 Pfam PF00563 EAL domain 469 699 6.7E-53 T 14-10-2018 IPR001633 EAL domain AMIS_31150 37624bd723fdb12c9bef62cffaeca287 727 SMART SM00267 280 453 2.6E-62 T 14-10-2018 IPR000160 GGDEF domain AMIS_31150 37624bd723fdb12c9bef62cffaeca287 727 Gene3D G3DSA:3.30.450.40 141 293 1.1E-5 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_31150 37624bd723fdb12c9bef62cffaeca287 727 SUPERFAMILY SSF55781 149 296 1.29E-5 T 14-10-2018 AMIS_31150 37624bd723fdb12c9bef62cffaeca287 727 Gene3D G3DSA:3.30.70.270 294 465 3.7E-58 T 14-10-2018 AMIS_6150 c77e2a35dacbd0d3330b58056d3371be 189 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 10 188 42.38 T 14-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_6150 c77e2a35dacbd0d3330b58056d3371be 189 Gene3D G3DSA:3.30.1440.10 9 188 7.8E-74 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_6150 c77e2a35dacbd0d3330b58056d3371be 189 SUPERFAMILY SSF55282 12 187 1.88E-71 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_6150 c77e2a35dacbd0d3330b58056d3371be 189 PIRSF PIRSF002161 6 189 8.5E-60 T 14-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_6150 c77e2a35dacbd0d3330b58056d3371be 189 Pfam PF00281 Ribosomal protein L5 33 89 2.3E-26 T 14-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_6150 c77e2a35dacbd0d3330b58056d3371be 189 Pfam PF00673 ribosomal L5P family C-terminus 93 186 8.0E-37 T 14-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_35450 0c85e4250383c2240c6a8e7b0e982cf0 559 ProSitePatterns PS00211 ABC transporters family signature. 458 472 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_35450 0c85e4250383c2240c6a8e7b0e982cf0 559 SUPERFAMILY SSF90123 11 314 3.27E-46 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMIS_35450 0c85e4250383c2240c6a8e7b0e982cf0 559 Gene3D G3DSA:1.20.1560.10 4 317 1.0E-43 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMIS_35450 0c85e4250383c2240c6a8e7b0e982cf0 559 Pfam PF00664 ABC transporter transmembrane region 26 289 2.7E-20 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AMIS_35450 0c85e4250383c2240c6a8e7b0e982cf0 559 Pfam PF00005 ABC transporter 345 485 6.4E-12 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_35450 0c85e4250383c2240c6a8e7b0e982cf0 559 SUPERFAMILY SSF52540 342 556 3.29E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_35450 0c85e4250383c2240c6a8e7b0e982cf0 559 Gene3D G3DSA:3.40.50.300 329 558 5.8E-44 T 14-10-2018 AMIS_3190 d65356ad6fb5e7e0da0b4cd40269d0f8 237 Gene3D G3DSA:1.20.81.30 91 202 3.4E-7 T 14-10-2018 AMIS_3190 d65356ad6fb5e7e0da0b4cd40269d0f8 237 Pfam PF00482 Type II secretion system (T2SS), protein F 104 223 4.9E-19 T 14-10-2018 IPR018076 Type II secretion system F domain AMIS_14500 c418c3c08ad6f906b8b2a125192b7e0f 284 Gene3D G3DSA:3.90.1200.10 106 265 2.6E-6 T 14-10-2018 AMIS_14500 c418c3c08ad6f906b8b2a125192b7e0f 284 SUPERFAMILY SSF56112 3 258 2.02E-28 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMIS_540 ff0f7c5e495123047f18d80e370c9193 230 Gene3D G3DSA:1.10.3630.10 1 210 8.1E-29 T 14-10-2018 IPR038261 Golgi phosphoprotein 3-like domain superfamily AMIS_540 ff0f7c5e495123047f18d80e370c9193 230 Pfam PF05719 Golgi phosphoprotein 3 (GPP34) 3 200 1.5E-48 T 14-10-2018 IPR008628 Golgi phosphoprotein 3-like GO:0070273 AMIS_49000 c34ea5a08df64e463b396abd8d683b96 210 Gene3D G3DSA:3.40.50.12740 1 200 4.7E-43 T 14-10-2018 AMIS_49000 c34ea5a08df64e463b396abd8d683b96 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 146 191 1.3E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_49000 c34ea5a08df64e463b396abd8d683b96 210 SUPERFAMILY SSF46894 142 192 2.78E-11 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_49000 c34ea5a08df64e463b396abd8d683b96 210 SMART SM00421 144 207 1.3E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_49000 c34ea5a08df64e463b396abd8d683b96 210 SMART SM00448 1 117 3.3E-6 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_49000 c34ea5a08df64e463b396abd8d683b96 210 SUPERFAMILY SSF52172 2 158 9.66E-18 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_49000 c34ea5a08df64e463b396abd8d683b96 210 Pfam PF00072 Response regulator receiver domain 2 105 5.1E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_49000 c34ea5a08df64e463b396abd8d683b96 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 189 5.0E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_49000 c34ea5a08df64e463b396abd8d683b96 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 147 161 5.0E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_49000 c34ea5a08df64e463b396abd8d683b96 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 161 177 5.0E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_62110 f893c08952431666c97cde5b948318f5 276 SUPERFAMILY SSF51366 4 273 1.5E-60 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AMIS_62110 f893c08952431666c97cde5b948318f5 276 Hamap MF_01215 Orotidine 5'-phosphate decarboxylase [pyrF]. 3 273 33.432 T 14-10-2018 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMIS_62110 f893c08952431666c97cde5b948318f5 276 Gene3D G3DSA:3.20.20.70 3 275 4.5E-92 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_62110 f893c08952431666c97cde5b948318f5 276 SMART SM00934 17 267 1.4E-31 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AMIS_62110 f893c08952431666c97cde5b948318f5 276 TIGRFAM TIGR02127 pyrF_sub2: orotidine 5'-phosphate decarboxylase 4 261 9.4E-85 T 14-10-2018 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMIS_62110 f893c08952431666c97cde5b948318f5 276 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 17 254 3.0E-31 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AMIS_62110 f893c08952431666c97cde5b948318f5 276 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 91 104 - T 14-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AMIS_14160 2b2f257714397d102bd38573939837a3 153 PIRSF PIRSF017385 1 150 6.2E-47 T 14-10-2018 IPR021050 Cytochrome c oxidase subunit IV, actinobacteria GO:0004129|GO:0016021|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 AMIS_14160 2b2f257714397d102bd38573939837a3 153 Pfam PF12270 Cytochrome c oxidase subunit IV 2 148 4.7E-46 T 14-10-2018 IPR021050 Cytochrome c oxidase subunit IV, actinobacteria GO:0004129|GO:0016021|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 AMIS_57460 d2dad7ade65ecb7530ef9adbae60bda0 661 PIRSF PIRSF000168 42 655 2.4E-165 T 14-10-2018 IPR012258 Acyl-CoA oxidase GO:0003997|GO:0005777|GO:0006631|GO:0071949 KEGG: 00071+1.3.3.6|KEGG: 00592+1.3.3.6|MetaCyc: PWY-5136|MetaCyc: PWY-6837|MetaCyc: PWY-6920|MetaCyc: PWY-7007|MetaCyc: PWY-7288|MetaCyc: PWY-7291|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7574|MetaCyc: PWY-7606|MetaCyc: PWY-7726|MetaCyc: PWY-7854|MetaCyc: PWY-7858|Reactome: R-HSA-9033241 AMIS_57460 d2dad7ade65ecb7530ef9adbae60bda0 661 SUPERFAMILY SSF56645 12 256 1.7E-47 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMIS_57460 d2dad7ade65ecb7530ef9adbae60bda0 661 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 67 130 2.0E-6 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMIS_57460 d2dad7ade65ecb7530ef9adbae60bda0 661 Gene3D G3DSA:2.40.110.10 133 266 3.4E-47 T 14-10-2018 AMIS_57460 d2dad7ade65ecb7530ef9adbae60bda0 661 SUPERFAMILY SSF47203 492 636 1.57E-37 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMIS_57460 d2dad7ade65ecb7530ef9adbae60bda0 661 SUPERFAMILY SSF47203 273 449 6.73E-47 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMIS_57460 d2dad7ade65ecb7530ef9adbae60bda0 661 Gene3D G3DSA:1.10.540.10 21 130 1.3E-6 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMIS_57460 d2dad7ade65ecb7530ef9adbae60bda0 661 Pfam PF01756 Acyl-CoA oxidase 498 636 1.2E-23 T 14-10-2018 IPR002655 Acyl-CoA oxidase, C-terminal GO:0003997|GO:0005777|GO:0006635 KEGG: 00071+1.3.3.6|KEGG: 00592+1.3.3.6|MetaCyc: PWY-5136|MetaCyc: PWY-6837|MetaCyc: PWY-6920|MetaCyc: PWY-7007|MetaCyc: PWY-7288|MetaCyc: PWY-7291|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7574|MetaCyc: PWY-7606|MetaCyc: PWY-7726|MetaCyc: PWY-7854|MetaCyc: PWY-7858 AMIS_57460 d2dad7ade65ecb7530ef9adbae60bda0 661 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 277 437 1.3E-8 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMIS_57460 d2dad7ade65ecb7530ef9adbae60bda0 661 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 134 243 1.0E-13 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMIS_57460 d2dad7ade65ecb7530ef9adbae60bda0 661 Gene3D G3DSA:1.20.140.10 495 626 3.6E-23 T 14-10-2018 AMIS_57460 d2dad7ade65ecb7530ef9adbae60bda0 661 Gene3D G3DSA:1.20.140.10 277 446 1.1E-50 T 14-10-2018 AMIS_36030 89983d390aba460399811ebd941bb1ea 259 SUPERFAMILY SSF53474 4 246 1.96E-20 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_36030 89983d390aba460399811ebd941bb1ea 259 PIRSF PIRSF037442 1 250 4.1E-39 T 14-10-2018 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 AMIS_36030 89983d390aba460399811ebd941bb1ea 259 Pfam PF12146 Serine aminopeptidase, S33 5 129 4.1E-10 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 AMIS_36030 89983d390aba460399811ebd941bb1ea 259 Gene3D G3DSA:3.40.50.1820 1 247 1.3E-18 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_29250 04c318b1e14abb323dc4078a35619353 268 SUPERFAMILY SSF52540 4 228 2.61E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_29250 04c318b1e14abb323dc4078a35619353 268 Pfam PF00005 ABC transporter 21 167 3.7E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_29250 04c318b1e14abb323dc4078a35619353 268 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_29250 04c318b1e14abb323dc4078a35619353 268 SMART SM00382 28 216 3.1E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_29250 04c318b1e14abb323dc4078a35619353 268 Gene3D G3DSA:3.40.50.300 4 255 1.3E-69 T 14-10-2018 AMIS_17150 7718f2eadae2b47b461d2959f213404c 739 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 304 536 2.9E-57 T 14-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 AMIS_17150 7718f2eadae2b47b461d2959f213404c 739 SMART SM01217 569 639 1.5E-30 T 14-10-2018 IPR026891 Fibronectin type III-like domain AMIS_17150 7718f2eadae2b47b461d2959f213404c 739 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 25 273 2.4E-50 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMIS_17150 7718f2eadae2b47b461d2959f213404c 739 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 207 224 - T 14-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 AMIS_17150 7718f2eadae2b47b461d2959f213404c 739 SUPERFAMILY SSF51445 3 302 6.84E-88 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_17150 7718f2eadae2b47b461d2959f213404c 739 Gene3D G3DSA:3.20.20.300 1 291 1.4E-105 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 AMIS_17150 7718f2eadae2b47b461d2959f213404c 739 Gene3D G3DSA:3.40.50.1700 292 536 2.6E-73 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 AMIS_17150 7718f2eadae2b47b461d2959f213404c 739 SUPERFAMILY SSF52279 304 539 4.18E-51 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 AMIS_17150 7718f2eadae2b47b461d2959f213404c 739 Pfam PF14310 Fibronectin type III-like domain 569 639 5.5E-25 T 14-10-2018 IPR026891 Fibronectin type III-like domain AMIS_17150 7718f2eadae2b47b461d2959f213404c 739 PRINTS PR00133 Glycosyl hydrolase family 3 signature 60 79 1.3E-35 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMIS_17150 7718f2eadae2b47b461d2959f213404c 739 PRINTS PR00133 Glycosyl hydrolase family 3 signature 207 225 1.3E-35 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMIS_17150 7718f2eadae2b47b461d2959f213404c 739 PRINTS PR00133 Glycosyl hydrolase family 3 signature 27 43 1.3E-35 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMIS_17150 7718f2eadae2b47b461d2959f213404c 739 PRINTS PR00133 Glycosyl hydrolase family 3 signature 137 153 1.3E-35 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMIS_17150 7718f2eadae2b47b461d2959f213404c 739 PRINTS PR00133 Glycosyl hydrolase family 3 signature 106 122 1.3E-35 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMIS_17150 7718f2eadae2b47b461d2959f213404c 739 Gene3D G3DSA:2.60.40.10 537 651 1.1E-35 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_53060 ef000208d0e9500f994c290e6a1c5573 292 Gene3D G3DSA:1.10.260.40 11 76 1.9E-6 T 14-10-2018 AMIS_53060 ef000208d0e9500f994c290e6a1c5573 292 SUPERFAMILY SSF47413 14 73 4.44E-7 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_53060 ef000208d0e9500f994c290e6a1c5573 292 SMART SM00530 22 77 0.0019 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMIS_53060 ef000208d0e9500f994c290e6a1c5573 292 Pfam PF13560 Helix-turn-helix domain 18 80 7.0E-14 T 14-10-2018 AMIS_18610 fde80156af1323054cc05268ed10d280 669 Pfam PF00072 Response regulator receiver domain 548 659 4.8E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_18610 fde80156af1323054cc05268ed10d280 669 Pfam PF00072 Response regulator receiver domain 1 114 1.3E-17 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_18610 fde80156af1323054cc05268ed10d280 669 SMART SM00448 1 114 9.5E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_18610 fde80156af1323054cc05268ed10d280 669 SMART SM00448 545 659 1.1E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_18610 fde80156af1323054cc05268ed10d280 669 SMART SM00091 159 225 1.4E-5 T 14-10-2018 IPR000014 PAS domain AMIS_18610 fde80156af1323054cc05268ed10d280 669 Pfam PF08448 PAS fold 167 273 8.5E-11 T 14-10-2018 IPR013656 PAS fold-4 AMIS_18610 fde80156af1323054cc05268ed10d280 669 SMART SM00387 418 526 1.4E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_18610 fde80156af1323054cc05268ed10d280 669 SUPERFAMILY SSF55874 368 528 3.14E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_18610 fde80156af1323054cc05268ed10d280 669 Gene3D G3DSA:3.30.565.10 373 524 1.9E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_18610 fde80156af1323054cc05268ed10d280 669 PRINTS PR00344 Bacterial sensor protein C-terminal signature 455 469 2.5E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_18610 fde80156af1323054cc05268ed10d280 669 PRINTS PR00344 Bacterial sensor protein C-terminal signature 486 504 2.5E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_18610 fde80156af1323054cc05268ed10d280 669 PRINTS PR00344 Bacterial sensor protein C-terminal signature 510 523 2.5E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_18610 fde80156af1323054cc05268ed10d280 669 PRINTS PR00344 Bacterial sensor protein C-terminal signature 473 483 2.5E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_18610 fde80156af1323054cc05268ed10d280 669 Gene3D G3DSA:1.10.287.130 294 372 3.5E-13 T 14-10-2018 AMIS_18610 fde80156af1323054cc05268ed10d280 669 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 157 280 4.9E-13 T 14-10-2018 IPR000014 PAS domain AMIS_18610 fde80156af1323054cc05268ed10d280 669 SUPERFAMILY SSF52172 1 121 2.28E-26 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_18610 fde80156af1323054cc05268ed10d280 669 Gene3D G3DSA:3.40.50.2300 1 141 1.6E-24 T 14-10-2018 AMIS_18610 fde80156af1323054cc05268ed10d280 669 Gene3D G3DSA:3.30.450.20 146 283 5.0E-18 T 14-10-2018 AMIS_18610 fde80156af1323054cc05268ed10d280 669 Gene3D G3DSA:3.40.50.2300 538 669 1.5E-23 T 14-10-2018 AMIS_18610 fde80156af1323054cc05268ed10d280 669 SUPERFAMILY SSF52172 545 664 5.69E-24 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_18610 fde80156af1323054cc05268ed10d280 669 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 419 524 9.3E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_18610 fde80156af1323054cc05268ed10d280 669 SUPERFAMILY SSF55785 148 271 9.95E-17 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_18610 fde80156af1323054cc05268ed10d280 669 SUPERFAMILY SSF47384 290 376 2.35E-6 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_35430 b0bd68cfe72f0c159c862a5578e4c996 314 Gene3D G3DSA:1.20.144.10 131 223 8.4E-13 T 14-10-2018 AMIS_35430 b0bd68cfe72f0c159c862a5578e4c996 314 SMART SM00014 98 205 1.8E-5 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMIS_35430 b0bd68cfe72f0c159c862a5578e4c996 314 SUPERFAMILY SSF48317 28 216 1.44E-18 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily AMIS_35430 b0bd68cfe72f0c159c862a5578e4c996 314 Pfam PF01569 PAP2 superfamily 132 205 3.5E-10 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMIS_76570 5f27cbfdc8b7f19d9e0d0700ae4a20a6 439 Gene3D G3DSA:3.30.565.10 303 439 6.2E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_76570 5f27cbfdc8b7f19d9e0d0700ae4a20a6 439 SMART SM00073 4 101 3.7E-19 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AMIS_76570 5f27cbfdc8b7f19d9e0d0700ae4a20a6 439 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 349 409 1.8E-5 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_76570 5f27cbfdc8b7f19d9e0d0700ae4a20a6 439 SUPERFAMILY SSF47384 244 303 1.69E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_76570 5f27cbfdc8b7f19d9e0d0700ae4a20a6 439 SUPERFAMILY SSF160246 179 269 4.71E-6 T 14-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily AMIS_76570 5f27cbfdc8b7f19d9e0d0700ae4a20a6 439 SUPERFAMILY SSF55874 305 438 3.93E-22 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_76570 5f27cbfdc8b7f19d9e0d0700ae4a20a6 439 SUPERFAMILY SSF47226 4 126 1.7E-27 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMIS_76570 5f27cbfdc8b7f19d9e0d0700ae4a20a6 439 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 243 302 1.4E-15 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AMIS_76570 5f27cbfdc8b7f19d9e0d0700ae4a20a6 439 Gene3D G3DSA:1.20.120.160 1 145 5.2E-35 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMIS_76570 5f27cbfdc8b7f19d9e0d0700ae4a20a6 439 Pfam PF01627 Hpt domain 6 95 1.2E-14 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AMIS_76570 5f27cbfdc8b7f19d9e0d0700ae4a20a6 439 Gene3D G3DSA:1.10.287.560 243 302 1.1E-18 T 14-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 AMIS_76570 5f27cbfdc8b7f19d9e0d0700ae4a20a6 439 SMART SM01231 242 302 1.2E-16 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AMIS_50960 5854b8606e0fb1cf650bfba09ae45480 632 SUPERFAMILY SSF52540 16 202 6.5E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_50960 5854b8606e0fb1cf650bfba09ae45480 632 Gene3D G3DSA:3.40.50.300 213 345 1.1E-39 T 14-10-2018 AMIS_50960 5854b8606e0fb1cf650bfba09ae45480 632 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 21 473 8.9E-149 T 14-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 AMIS_50960 5854b8606e0fb1cf650bfba09ae45480 632 Gene3D G3DSA:1.10.150.80 554 622 7.3E-22 T 14-10-2018 AMIS_50960 5854b8606e0fb1cf650bfba09ae45480 632 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 19 620 1.8E-226 T 14-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 AMIS_50960 5854b8606e0fb1cf650bfba09ae45480 632 SMART SM00487 26 222 2.9E-26 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMIS_50960 5854b8606e0fb1cf650bfba09ae45480 632 Pfam PF09382 RQC domain 413 527 6.4E-35 T 14-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 AMIS_50960 5854b8606e0fb1cf650bfba09ae45480 632 SMART SM00490 255 336 1.8E-24 T 14-10-2018 IPR001650 Helicase, C-terminal AMIS_50960 5854b8606e0fb1cf650bfba09ae45480 632 Gene3D G3DSA:1.10.10.10 346 533 2.8E-48 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_50960 5854b8606e0fb1cf650bfba09ae45480 632 Pfam PF16124 RecQ zinc-binding 348 411 3.0E-17 T 14-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain AMIS_50960 5854b8606e0fb1cf650bfba09ae45480 632 SMART SM00956 418 524 5.7E-44 T 14-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 AMIS_50960 5854b8606e0fb1cf650bfba09ae45480 632 Pfam PF00270 DEAD/DEAH box helicase 34 189 8.7E-16 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMIS_50960 5854b8606e0fb1cf650bfba09ae45480 632 Gene3D G3DSA:3.40.50.300 10 212 9.8E-78 T 14-10-2018 AMIS_50960 5854b8606e0fb1cf650bfba09ae45480 632 SUPERFAMILY SSF47819 550 622 1.07E-20 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 AMIS_50960 5854b8606e0fb1cf650bfba09ae45480 632 SUPERFAMILY SSF52540 208 466 2.24E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_50960 5854b8606e0fb1cf650bfba09ae45480 632 Pfam PF00271 Helicase conserved C-terminal domain 229 335 3.0E-16 T 14-10-2018 IPR001650 Helicase, C-terminal AMIS_50960 5854b8606e0fb1cf650bfba09ae45480 632 SMART SM00341 550 632 1.4E-12 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 AMIS_50960 5854b8606e0fb1cf650bfba09ae45480 632 Pfam PF00570 HRDC domain 555 620 3.3E-22 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 AMIS_52370 d213582ce87660e62286b4cd2671f2c6 237 SUPERFAMILY SSF141523 120 231 3.27E-22 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like AMIS_52370 d213582ce87660e62286b4cd2671f2c6 237 Pfam PF01471 Putative peptidoglycan binding domain 49 100 1.1E-4 T 14-10-2018 IPR002477 Peptidoglycan binding-like AMIS_52370 d213582ce87660e62286b4cd2671f2c6 237 Gene3D G3DSA:2.40.440.10 120 236 4.5E-24 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like AMIS_52370 d213582ce87660e62286b4cd2671f2c6 237 Gene3D G3DSA:1.10.101.10 33 104 2.6E-5 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 AMIS_52370 d213582ce87660e62286b4cd2671f2c6 237 Pfam PF03734 L,D-transpeptidase catalytic domain 123 230 1.6E-14 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 AMIS_52370 d213582ce87660e62286b4cd2671f2c6 237 SUPERFAMILY SSF47090 44 100 2.35E-5 T 14-10-2018 IPR036365 PGBD-like superfamily AMIS_26520 a5d641c2f655e7ff265bc0ae4334f18b 225 SUPERFAMILY SSF46894 157 207 3.23E-13 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_26520 a5d641c2f655e7ff265bc0ae4334f18b 225 Pfam PF00196 Bacterial regulatory proteins, luxR family 161 207 2.2E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_26520 a5d641c2f655e7ff265bc0ae4334f18b 225 SMART SM00448 12 131 3.1E-12 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_26520 a5d641c2f655e7ff265bc0ae4334f18b 225 SUPERFAMILY SSF52172 12 169 1.45E-19 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_26520 a5d641c2f655e7ff265bc0ae4334f18b 225 Gene3D G3DSA:3.40.50.12740 12 222 2.2E-44 T 14-10-2018 AMIS_26520 a5d641c2f655e7ff265bc0ae4334f18b 225 SMART SM00421 159 221 9.3E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_26520 a5d641c2f655e7ff265bc0ae4334f18b 225 Pfam PF00072 Response regulator receiver domain 16 119 5.8E-13 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_26520 a5d641c2f655e7ff265bc0ae4334f18b 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 176 9.0E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_26520 a5d641c2f655e7ff265bc0ae4334f18b 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 192 9.0E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_26520 a5d641c2f655e7ff265bc0ae4334f18b 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 192 204 9.0E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_23440 cf0c8032808ed50186ee0c971ba1b5e1 589 SUPERFAMILY SSF48452 304 524 1.69E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_23440 cf0c8032808ed50186ee0c971ba1b5e1 589 Gene3D G3DSA:1.25.40.10 93 247 2.4E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_23440 cf0c8032808ed50186ee0c971ba1b5e1 589 SMART SM01043 91 226 1.7E-13 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain AMIS_23440 cf0c8032808ed50186ee0c971ba1b5e1 589 Gene3D G3DSA:1.10.10.10 1 92 7.5E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_23440 cf0c8032808ed50186ee0c971ba1b5e1 589 SUPERFAMILY SSF48452 101 225 2.28E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_23440 cf0c8032808ed50186ee0c971ba1b5e1 589 Pfam PF13424 Tetratricopeptide repeat 365 436 4.4E-9 T 14-10-2018 AMIS_23440 cf0c8032808ed50186ee0c971ba1b5e1 589 Gene3D G3DSA:1.25.40.10 254 588 1.6E-20 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_23440 cf0c8032808ed50186ee0c971ba1b5e1 589 Pfam PF03704 Bacterial transcriptional activator domain 96 224 2.2E-8 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain AMIS_32230 16596e11c927a06004f3373d415b62bd 354 SUPERFAMILY SSF51735 173 298 1.43E-13 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_32230 16596e11c927a06004f3373d415b62bd 354 SUPERFAMILY SSF50129 11 182 1.67E-26 T 14-10-2018 IPR011032 GroES-like superfamily AMIS_32230 16596e11c927a06004f3373d415b62bd 354 Pfam PF16912 Glucose dehydrogenase C-terminus 144 344 6.3E-53 T 14-10-2018 IPR031640 Glucose dehydrogenase, C-terminal KEGG: 00030+1.1.1.47 AMIS_32230 16596e11c927a06004f3373d415b62bd 354 Gene3D G3DSA:3.90.180.10 16 343 8.8E-90 T 14-10-2018 AMIS_32230 16596e11c927a06004f3373d415b62bd 354 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 130 5.4E-11 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMIS_32230 16596e11c927a06004f3373d415b62bd 354 Gene3D G3DSA:3.40.50.720 146 319 8.8E-90 T 14-10-2018 AMIS_14460 a4a6e96a8080082a5c602377e5628671 482 SUPERFAMILY SSF53756 4 459 6.15E-135 T 14-10-2018 AMIS_14460 a4a6e96a8080082a5c602377e5628671 482 Gene3D G3DSA:3.40.50.2000 236 444 3.9E-157 T 14-10-2018 AMIS_14460 a4a6e96a8080082a5c602377e5628671 482 Gene3D G3DSA:3.40.50.2000 29 455 3.9E-157 T 14-10-2018 AMIS_14460 a4a6e96a8080082a5c602377e5628671 482 Pfam PF00982 Glycosyltransferase family 20 5 458 2.7E-137 T 14-10-2018 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 KEGG: 00500+2.4.1.15 AMIS_63870 44b5aba70ee0e927f0d7fd9106f2962d 73 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 19 72 6.0E-7 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor AMIS_63870 44b5aba70ee0e927f0d7fd9106f2962d 73 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 5 73 17.567 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor AMIS_63870 44b5aba70ee0e927f0d7fd9106f2962d 73 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 12 73 7.1E-21 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor AMIS_63870 44b5aba70ee0e927f0d7fd9106f2962d 73 SMART SM01234 5 72 8.5E-27 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor AMIS_63870 44b5aba70ee0e927f0d7fd9106f2962d 73 Pfam PF01809 Haemolytic domain 8 72 1.4E-23 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor AMIS_24690 3fc78160d6cf65b6123d610a1c64794a 883 SMART SM00421 824 881 4.1E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_24690 3fc78160d6cf65b6123d610a1c64794a 883 Gene3D G3DSA:1.10.10.10 775 883 2.0E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_24690 3fc78160d6cf65b6123d610a1c64794a 883 Gene3D G3DSA:3.40.50.300 2 173 6.8E-8 T 14-10-2018 AMIS_24690 3fc78160d6cf65b6123d610a1c64794a 883 SUPERFAMILY SSF46894 818 880 8.16E-16 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_24690 3fc78160d6cf65b6123d610a1c64794a 883 SUPERFAMILY SSF52540 7 224 1.66E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_24690 3fc78160d6cf65b6123d610a1c64794a 883 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 841 857 3.1E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_24690 3fc78160d6cf65b6123d610a1c64794a 883 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 827 841 3.1E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_24690 3fc78160d6cf65b6123d610a1c64794a 883 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 857 869 3.1E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_24690 3fc78160d6cf65b6123d610a1c64794a 883 SUPERFAMILY SSF48452 649 781 2.92E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_24690 3fc78160d6cf65b6123d610a1c64794a 883 Pfam PF00196 Bacterial regulatory proteins, luxR family 826 877 9.4E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_24690 3fc78160d6cf65b6123d610a1c64794a 883 Pfam PF13191 AAA ATPase domain 6 160 9.4E-18 T 14-10-2018 AMIS_52390 1a0ba4446a13483c2aca782527050620 450 Pfam PF01757 Acyltransferase family 4 325 1.5E-18 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 AMIS_62620 54c94bb10f120c1be21fee22a03a3689 300 SUPERFAMILY SSF88946 17 98 1.73E-18 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_62620 54c94bb10f120c1be21fee22a03a3689 300 SUPERFAMILY SSF88659 167 244 7.85E-17 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_62620 54c94bb10f120c1be21fee22a03a3689 300 PRINTS PR00046 Major sigma-70 factor signature 212 227 1.9E-5 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMIS_62620 54c94bb10f120c1be21fee22a03a3689 300 PRINTS PR00046 Major sigma-70 factor signature 53 66 1.9E-5 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMIS_62620 54c94bb10f120c1be21fee22a03a3689 300 PRINTS PR00046 Major sigma-70 factor signature 227 238 1.9E-5 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMIS_62620 54c94bb10f120c1be21fee22a03a3689 300 PRINTS PR00046 Major sigma-70 factor signature 195 207 1.9E-5 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMIS_62620 54c94bb10f120c1be21fee22a03a3689 300 Pfam PF04539 Sigma-70 region 3 108 177 3.0E-7 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 AMIS_62620 54c94bb10f120c1be21fee22a03a3689 300 Pfam PF04542 Sigma-70 region 2 26 98 1.1E-9 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_62620 54c94bb10f120c1be21fee22a03a3689 300 SUPERFAMILY SSF88659 100 160 2.57E-10 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_62620 54c94bb10f120c1be21fee22a03a3689 300 Pfam PF04545 Sigma-70, region 4 191 240 4.4E-13 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 AMIS_62620 54c94bb10f120c1be21fee22a03a3689 300 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 23 241 6.8E-27 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_62620 54c94bb10f120c1be21fee22a03a3689 300 Gene3D G3DSA:1.20.140.160 97 245 2.1E-35 T 14-10-2018 AMIS_62620 54c94bb10f120c1be21fee22a03a3689 300 Gene3D G3DSA:1.10.1740.10 13 95 1.1E-18 T 14-10-2018 AMIS_11570 a0d80efb56facaceab12324df0409393 258 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 35 230 3.5E-36 T 14-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 AMIS_11570 a0d80efb56facaceab12324df0409393 258 TIGRFAM TIGR03704 PrmC_rel_meth: putative protein-(glutamine-N5) methyltransferase, unknown substrate-specific 8 251 6.0E-94 T 14-10-2018 IPR022446 Conserved hypothetical protein CHP03704, protein-(glutamine-N5) methyltransferase AMIS_11570 a0d80efb56facaceab12324df0409393 258 Gene3D G3DSA:3.40.50.150 64 253 7.3E-40 T 14-10-2018 AMIS_11570 a0d80efb56facaceab12324df0409393 258 SUPERFAMILY SSF53335 43 218 1.49E-41 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_11570 a0d80efb56facaceab12324df0409393 258 Gene3D G3DSA:1.10.8.10 3 63 1.2E-5 T 14-10-2018 AMIS_11570 a0d80efb56facaceab12324df0409393 258 Pfam PF05175 Methyltransferase small domain 67 170 1.3E-9 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 AMIS_31690 03993ca9b07c24dd51fe2ea5ce7cd885 746 ProSitePatterns PS00622 LuxR-type HTH domain signature. 705 732 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_31690 03993ca9b07c24dd51fe2ea5ce7cd885 746 Gene3D G3DSA:1.10.10.10 636 746 1.1E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_31690 03993ca9b07c24dd51fe2ea5ce7cd885 746 SUPERFAMILY SSF46894 679 743 1.56E-16 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_31690 03993ca9b07c24dd51fe2ea5ce7cd885 746 SMART SM00421 688 745 3.1E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_31690 03993ca9b07c24dd51fe2ea5ce7cd885 746 Pfam PF00196 Bacterial regulatory proteins, luxR family 691 741 3.7E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_31690 03993ca9b07c24dd51fe2ea5ce7cd885 746 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 705 721 4.9E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_31690 03993ca9b07c24dd51fe2ea5ce7cd885 746 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 691 705 4.9E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_31690 03993ca9b07c24dd51fe2ea5ce7cd885 746 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 721 733 4.9E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_37700 5e171a3d12f394eda8746e07ee9b3be1 176 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 58 77 6.6E-12 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMIS_37700 5e171a3d12f394eda8746e07ee9b3be1 176 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 47 6.6E-12 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMIS_37700 5e171a3d12f394eda8746e07ee9b3be1 176 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 47 58 6.6E-12 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMIS_37700 5e171a3d12f394eda8746e07ee9b3be1 176 Gene3D G3DSA:1.10.10.10 28 80 8.8E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_37700 5e171a3d12f394eda8746e07ee9b3be1 176 SMART SM00344 31 135 5.5E-30 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AMIS_37700 5e171a3d12f394eda8746e07ee9b3be1 176 SUPERFAMILY SSF46785 30 89 4.12E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_37700 5e171a3d12f394eda8746e07ee9b3be1 176 Pfam PF01037 Lrp/AsnC ligand binding domain 96 165 5.8E-13 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMIS_37700 5e171a3d12f394eda8746e07ee9b3be1 176 SUPERFAMILY SSF54909 94 172 9.25E-14 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel AMIS_37700 5e171a3d12f394eda8746e07ee9b3be1 176 Gene3D G3DSA:3.30.70.920 82 162 1.5E-18 T 14-10-2018 AMIS_37700 5e171a3d12f394eda8746e07ee9b3be1 176 Pfam PF13404 AsnC-type helix-turn-helix domain 31 71 1.1E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMIS_7380 c490a585b6d053aaf984998c86b0e95a 558 SUPERFAMILY SSF52540 323 496 3.62E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_7380 c490a585b6d053aaf984998c86b0e95a 558 Pfam PF02706 Chain length determinant protein 10 65 6.6E-6 T 14-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 AMIS_7380 c490a585b6d053aaf984998c86b0e95a 558 Gene3D G3DSA:3.40.50.300 255 499 9.5E-36 T 14-10-2018 AMIS_3570 780d1a4632c83547f29ad819ac71acf7 314 TIGRFAM TIGR02779 NHEJ_ligase_lig: DNA ligase D, ligase domain 13 308 3.4E-69 T 14-10-2018 IPR014146 DNA ligase D, ligase domain AMIS_3570 780d1a4632c83547f29ad819ac71acf7 314 Gene3D G3DSA:3.30.470.30 30 149 3.9E-49 T 14-10-2018 AMIS_3570 780d1a4632c83547f29ad819ac71acf7 314 Gene3D G3DSA:2.40.50.140 194 311 2.6E-30 T 14-10-2018 AMIS_3570 780d1a4632c83547f29ad819ac71acf7 314 Pfam PF04679 ATP dependent DNA ligase C terminal region 209 303 1.8E-19 T 14-10-2018 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 AMIS_3570 780d1a4632c83547f29ad819ac71acf7 314 SUPERFAMILY SSF50249 196 310 6.85E-22 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMIS_3570 780d1a4632c83547f29ad819ac71acf7 314 Gene3D G3DSA:3.30.1490.70 19 190 3.9E-49 T 14-10-2018 AMIS_3570 780d1a4632c83547f29ad819ac71acf7 314 Pfam PF01068 ATP dependent DNA ligase domain 20 192 6.8E-25 T 14-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 AMIS_3570 780d1a4632c83547f29ad819ac71acf7 314 SUPERFAMILY SSF56091 4 192 4.03E-41 T 14-10-2018 AMIS_31360 439d2f47d91a8485409aa2103e8835d0 243 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 3 91 9.9E-20 T 14-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal AMIS_31360 439d2f47d91a8485409aa2103e8835d0 243 Gene3D G3DSA:3.40.50.720 1 195 1.5E-46 T 14-10-2018 AMIS_31360 439d2f47d91a8485409aa2103e8835d0 243 SUPERFAMILY SSF51735 3 196 5.58E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_48510 75ed9193f5608ac304fcb35cd0ad72e9 284 SUPERFAMILY SSF50494 85 280 1.37E-52 T 14-10-2018 IPR009003 Peptidase S1, PA clan AMIS_48510 75ed9193f5608ac304fcb35cd0ad72e9 284 Pfam PF13365 Trypsin-like peptidase domain 111 247 5.0E-33 T 14-10-2018 AMIS_48510 75ed9193f5608ac304fcb35cd0ad72e9 284 PRINTS PR00834 HtrA/DegQ protease family signature 120 132 3.4E-35 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMIS_48510 75ed9193f5608ac304fcb35cd0ad72e9 284 PRINTS PR00834 HtrA/DegQ protease family signature 182 206 3.4E-35 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMIS_48510 75ed9193f5608ac304fcb35cd0ad72e9 284 PRINTS PR00834 HtrA/DegQ protease family signature 141 161 3.4E-35 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMIS_48510 75ed9193f5608ac304fcb35cd0ad72e9 284 PRINTS PR00834 HtrA/DegQ protease family signature 218 235 3.4E-35 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMIS_48510 75ed9193f5608ac304fcb35cd0ad72e9 284 PRINTS PR00834 HtrA/DegQ protease family signature 240 257 3.4E-35 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMIS_48510 75ed9193f5608ac304fcb35cd0ad72e9 284 Gene3D G3DSA:2.40.10.120 73 283 4.4E-65 T 14-10-2018 AMIS_5250 82db5b53e73899b1647930bebceab642 495 SUPERFAMILY SSF53335 229 451 4.17E-31 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_5250 82db5b53e73899b1647930bebceab642 495 SUPERFAMILY SSF103473 11 202 4.71E-9 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_5250 82db5b53e73899b1647930bebceab642 495 Gene3D G3DSA:1.20.1250.20 4 202 7.8E-8 T 14-10-2018 AMIS_5250 82db5b53e73899b1647930bebceab642 495 Gene3D G3DSA:3.40.50.150 226 491 5.0E-69 T 14-10-2018 AMIS_11190 e06cd0e84b3e6c2c35d93f5379ea85d4 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 8 23 1.1E-7 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_11190 e06cd0e84b3e6c2c35d93f5379ea85d4 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 41 56 1.1E-7 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_11190 e06cd0e84b3e6c2c35d93f5379ea85d4 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 56 71 1.1E-7 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_11190 e06cd0e84b3e6c2c35d93f5379ea85d4 106 SMART SM00418 6 85 4.4E-15 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_11190 e06cd0e84b3e6c2c35d93f5379ea85d4 106 SUPERFAMILY SSF46785 2 103 1.49E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_11190 e06cd0e84b3e6c2c35d93f5379ea85d4 106 Pfam PF12840 Helix-turn-helix domain 5 65 1.9E-16 T 14-10-2018 AMIS_11190 e06cd0e84b3e6c2c35d93f5379ea85d4 106 Gene3D G3DSA:1.10.10.10 1 105 1.6E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_11810 939de2c0ac1339a60eaf830b484f3280 358 SUPERFAMILY SSF52540 123 289 4.53E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_11810 939de2c0ac1339a60eaf830b484f3280 358 Pfam PF02562 PhoH-like protein 124 326 9.1E-95 T 14-10-2018 IPR003714 PhoH-like protein GO:0005524 AMIS_11810 939de2c0ac1339a60eaf830b484f3280 358 Gene3D G3DSA:3.40.50.300 121 327 3.0E-78 T 14-10-2018 AMIS_81150 fd2e7d09b694682048a2da266cdeac0e 436 Gene3D G3DSA:3.90.1150.10 25 400 5.9E-129 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMIS_81150 fd2e7d09b694682048a2da266cdeac0e 436 SUPERFAMILY SSF53383 10 403 3.44E-105 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_81150 fd2e7d09b694682048a2da266cdeac0e 436 Pfam PF00155 Aminotransferase class I and II 50 397 1.4E-40 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMIS_81150 fd2e7d09b694682048a2da266cdeac0e 436 Gene3D G3DSA:3.40.640.10 72 296 5.9E-129 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_22410 d138cd93dc90bd708d61f0ce4df3d448 963 SMART SM00382 244 640 0.0011 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_22410 d138cd93dc90bd708d61f0ce4df3d448 963 Gene3D G3DSA:3.40.50.300 215 417 2.0E-13 T 14-10-2018 AMIS_22410 d138cd93dc90bd708d61f0ce4df3d448 963 Gene3D G3DSA:3.40.50.300 457 637 2.6E-9 T 14-10-2018 AMIS_22410 d138cd93dc90bd708d61f0ce4df3d448 963 Gene3D G3DSA:3.40.50.300 658 823 2.4E-25 T 14-10-2018 AMIS_22410 d138cd93dc90bd708d61f0ce4df3d448 963 SUPERFAMILY SSF52540 229 804 9.96E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_22410 d138cd93dc90bd708d61f0ce4df3d448 963 Pfam PF13087 AAA domain 697 805 1.7E-17 T 14-10-2018 AMIS_63280 3e96eff21d50912eb594f1625091cf2f 245 Pfam PF00005 ABC transporter 21 173 9.2E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_63280 3e96eff21d50912eb594f1625091cf2f 245 SMART SM00382 30 222 5.8E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_63280 3e96eff21d50912eb594f1625091cf2f 245 SUPERFAMILY SSF52540 6 243 2.24E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_63280 3e96eff21d50912eb594f1625091cf2f 245 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 222 244 7.1E-6 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AMIS_63280 3e96eff21d50912eb594f1625091cf2f 245 Gene3D G3DSA:3.40.50.300 2 245 3.1E-53 T 14-10-2018 AMIS_49310 64c0c305d21c6c94d8a76d7d166abfcb 217 Pfam PF00072 Response regulator receiver domain 6 117 1.3E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_49310 64c0c305d21c6c94d8a76d7d166abfcb 217 SUPERFAMILY SSF52172 4 135 4.55E-35 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_49310 64c0c305d21c6c94d8a76d7d166abfcb 217 Pfam PF00196 Bacterial regulatory proteins, luxR family 156 210 1.5E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_49310 64c0c305d21c6c94d8a76d7d166abfcb 217 SUPERFAMILY SSF46894 138 216 2.28E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_49310 64c0c305d21c6c94d8a76d7d166abfcb 217 SMART SM00421 154 211 2.9E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_49310 64c0c305d21c6c94d8a76d7d166abfcb 217 ProSitePatterns PS00622 LuxR-type HTH domain signature. 171 198 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_49310 64c0c305d21c6c94d8a76d7d166abfcb 217 Gene3D G3DSA:3.40.50.12740 4 217 2.1E-66 T 14-10-2018 AMIS_49310 64c0c305d21c6c94d8a76d7d166abfcb 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 187 5.6E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_49310 64c0c305d21c6c94d8a76d7d166abfcb 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 171 5.6E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_49310 64c0c305d21c6c94d8a76d7d166abfcb 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 187 199 5.6E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_49310 64c0c305d21c6c94d8a76d7d166abfcb 217 SMART SM00448 4 117 5.8E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_45040 415c586e5264f40024fd46f848433e78 347 Gene3D G3DSA:1.50.10.10 41 310 1.7E-15 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 AMIS_45040 415c586e5264f40024fd46f848433e78 347 SUPERFAMILY SSF48208 20 319 6.57E-40 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AMIS_54600 ba5d411cec39fd5e20c778a0f07e22bd 124 Gene3D G3DSA:3.90.1150.30 2 123 4.6E-5 T 14-10-2018 IPR038056 YjbR-like superfamily AMIS_54600 ba5d411cec39fd5e20c778a0f07e22bd 124 SUPERFAMILY SSF142906 6 120 5.23E-16 T 14-10-2018 IPR038056 YjbR-like superfamily AMIS_54600 ba5d411cec39fd5e20c778a0f07e22bd 124 Pfam PF04237 YjbR 13 107 1.1E-14 T 14-10-2018 IPR007351 Uncharacterised protein YjbR AMIS_80240 58dd75a6460c8ad9d120ee0bc1bd974d 245 Pfam PF00072 Response regulator receiver domain 5 114 4.1E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_80240 58dd75a6460c8ad9d120ee0bc1bd974d 245 SMART SM00448 3 114 5.3E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_80240 58dd75a6460c8ad9d120ee0bc1bd974d 245 Gene3D G3DSA:2.40.50.1020 143 243 1.1E-7 T 14-10-2018 AMIS_80240 58dd75a6460c8ad9d120ee0bc1bd974d 245 SUPERFAMILY SSF52172 4 125 6.97E-32 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_80240 58dd75a6460c8ad9d120ee0bc1bd974d 245 Pfam PF04397 LytTr DNA-binding domain 143 235 3.2E-21 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AMIS_80240 58dd75a6460c8ad9d120ee0bc1bd974d 245 Gene3D G3DSA:3.40.50.2300 2 123 7.2E-32 T 14-10-2018 AMIS_80240 58dd75a6460c8ad9d120ee0bc1bd974d 245 SMART SM00850 141 236 7.6E-27 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AMIS_72100 87db7e8d0a247d684db3dc1db7a8d381 363 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 2 357 36.699 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 AMIS_72100 87db7e8d0a247d684db3dc1db7a8d381 363 Pfam PF03462 PCRF domain 11 204 2.9E-62 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 AMIS_72100 87db7e8d0a247d684db3dc1db7a8d381 363 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 4 354 3.3E-140 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 AMIS_72100 87db7e8d0a247d684db3dc1db7a8d381 363 Pfam PF00472 RF-1 domain 212 321 5.1E-39 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AMIS_72100 87db7e8d0a247d684db3dc1db7a8d381 363 Gene3D G3DSA:3.30.70.1660 101 215 1.3E-41 T 14-10-2018 AMIS_72100 87db7e8d0a247d684db3dc1db7a8d381 363 SUPERFAMILY SSF75620 9 353 7.98E-121 T 14-10-2018 AMIS_72100 87db7e8d0a247d684db3dc1db7a8d381 363 Gene3D G3DSA:1.20.58.410 7 95 1.0E-5 T 14-10-2018 AMIS_72100 87db7e8d0a247d684db3dc1db7a8d381 363 Gene3D G3DSA:3.30.70.1660 290 362 1.3E-14 T 14-10-2018 AMIS_72100 87db7e8d0a247d684db3dc1db7a8d381 363 Gene3D G3DSA:3.30.160.20 216 289 4.9E-34 T 14-10-2018 AMIS_72100 87db7e8d0a247d684db3dc1db7a8d381 363 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AMIS_72100 87db7e8d0a247d684db3dc1db7a8d381 363 SMART SM00937 64 179 3.7E-47 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 AMIS_18650 39944cc6936542e9a5c70f75694357b6 379 Gene3D G3DSA:1.20.1250.20 3 194 2.5E-14 T 14-10-2018 AMIS_18650 39944cc6936542e9a5c70f75694357b6 379 Gene3D G3DSA:1.20.1250.20 205 379 2.3E-14 T 14-10-2018 AMIS_18650 39944cc6936542e9a5c70f75694357b6 379 Pfam PF07690 Major Facilitator Superfamily 211 374 2.0E-10 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_18650 39944cc6936542e9a5c70f75694357b6 379 Pfam PF07690 Major Facilitator Superfamily 30 196 3.5E-12 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_18650 39944cc6936542e9a5c70f75694357b6 379 SUPERFAMILY SSF103473 4 376 8.89E-35 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_1800 0c9002b0e8d25f5273bb65ba827b1e9b 675 SMART SM00331 457 673 3.0E-30 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_1800 0c9002b0e8d25f5273bb65ba827b1e9b 675 Gene3D G3DSA:3.60.40.10 430 674 1.5E-53 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_1800 0c9002b0e8d25f5273bb65ba827b1e9b 675 SUPERFAMILY SSF81606 470 672 9.68E-9 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_1800 0c9002b0e8d25f5273bb65ba827b1e9b 675 Gene3D G3DSA:3.30.565.10 19 150 5.1E-21 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_1800 0c9002b0e8d25f5273bb65ba827b1e9b 675 Gene3D G3DSA:3.30.450.40 283 429 8.2E-7 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_1800 0c9002b0e8d25f5273bb65ba827b1e9b 675 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 487 672 9.9E-34 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_1800 0c9002b0e8d25f5273bb65ba827b1e9b 675 SUPERFAMILY SSF55781 284 437 3.6E-11 T 14-10-2018 AMIS_1800 0c9002b0e8d25f5273bb65ba827b1e9b 675 Pfam PF13581 Histidine kinase-like ATPase domain 26 141 1.5E-10 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_25060 8d30d1ead6d97f0a7f282e56f4a98386 265 SMART SM00382 26 210 6.1E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_25060 8d30d1ead6d97f0a7f282e56f4a98386 265 Pfam PF00005 ABC transporter 18 166 7.0E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_25060 8d30d1ead6d97f0a7f282e56f4a98386 265 Gene3D G3DSA:3.40.50.300 1 244 2.9E-63 T 14-10-2018 AMIS_25060 8d30d1ead6d97f0a7f282e56f4a98386 265 SUPERFAMILY SSF52540 2 223 5.62E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_25060 8d30d1ead6d97f0a7f282e56f4a98386 265 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_53240 03674cc1fa983ee980523246563efd7f 409 PIRSF PIRSF003180 7 399 5.2E-90 T 14-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing AMIS_53240 03674cc1fa983ee980523246563efd7f 409 Gene3D G3DSA:1.10.3210.10 203 389 5.7E-26 T 14-10-2018 AMIS_53240 03674cc1fa983ee980523246563efd7f 409 Pfam PF00563 EAL domain 85 197 1.6E-8 T 14-10-2018 IPR001633 EAL domain AMIS_53240 03674cc1fa983ee980523246563efd7f 409 SUPERFAMILY SSF109604 190 374 9.42E-32 T 14-10-2018 AMIS_53240 03674cc1fa983ee980523246563efd7f 409 Gene3D G3DSA:3.20.20.450 6 202 1.0E-16 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_53240 03674cc1fa983ee980523246563efd7f 409 SUPERFAMILY SSF141868 9 201 2.09E-27 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_53240 03674cc1fa983ee980523246563efd7f 409 Pfam PF08668 HDOD domain 213 334 2.1E-19 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD AMIS_53240 03674cc1fa983ee980523246563efd7f 409 SMART SM00052 7 202 2.3E-5 T 14-10-2018 IPR001633 EAL domain AMIS_66380 0236da8bf7ae7766156cba300098d373 515 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 23 37 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AMIS_66380 0236da8bf7ae7766156cba300098d373 515 Gene3D G3DSA:3.40.1010.10 18 149 7.1E-33 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 AMIS_66380 0236da8bf7ae7766156cba300098d373 515 SUPERFAMILY SSF53790 13 251 2.88E-48 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 AMIS_66380 0236da8bf7ae7766156cba300098d373 515 SUPERFAMILY SSF53790 267 498 4.19E-54 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 AMIS_66380 0236da8bf7ae7766156cba300098d373 515 TIGRFAM TIGR01466 cobJ_cbiH: precorrin-3B C17-methyltransferase 270 512 7.0E-88 T 14-10-2018 IPR006363 Precorrin-3B C17-methyltransferase domain GO:0008168|GO:0009236 AMIS_66380 0236da8bf7ae7766156cba300098d373 515 Gene3D G3DSA:3.40.1010.10 263 378 4.8E-28 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 AMIS_66380 0236da8bf7ae7766156cba300098d373 515 TIGRFAM TIGR01467 cobI_cbiL: precorrin-2 C(20)-methyltransferase 18 249 1.3E-63 T 14-10-2018 IPR006364 Precorrin-2 C(20)-methyltransferase domain GO:0008757|GO:0009236 AMIS_66380 0236da8bf7ae7766156cba300098d373 515 Gene3D G3DSA:3.30.950.10 151 262 1.1E-13 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 AMIS_66380 0236da8bf7ae7766156cba300098d373 515 Gene3D G3DSA:3.30.950.10 379 514 2.3E-52 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 AMIS_66380 0236da8bf7ae7766156cba300098d373 515 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 19 233 9.0E-48 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 AMIS_66380 0236da8bf7ae7766156cba300098d373 515 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 270 476 1.8E-38 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 AMIS_15870 077d57f0859a83e35685310743f0abc5 503 Pfam PF00575 S1 RNA binding domain 294 366 1.4E-21 T 14-10-2018 IPR003029 S1 domain GO:0003676 AMIS_15870 077d57f0859a83e35685310743f0abc5 503 Pfam PF00575 S1 RNA binding domain 208 280 5.5E-26 T 14-10-2018 IPR003029 S1 domain GO:0003676 AMIS_15870 077d57f0859a83e35685310743f0abc5 503 Pfam PF00575 S1 RNA binding domain 126 191 4.0E-12 T 14-10-2018 IPR003029 S1 domain GO:0003676 AMIS_15870 077d57f0859a83e35685310743f0abc5 503 Pfam PF00575 S1 RNA binding domain 36 108 8.4E-15 T 14-10-2018 IPR003029 S1 domain GO:0003676 AMIS_15870 077d57f0859a83e35685310743f0abc5 503 SUPERFAMILY SSF50249 210 293 1.19E-27 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMIS_15870 077d57f0859a83e35685310743f0abc5 503 SMART SM00316 124 191 4.2E-7 T 14-10-2018 IPR022967 RNA-binding domain, S1 AMIS_15870 077d57f0859a83e35685310743f0abc5 503 SMART SM00316 295 366 1.2E-24 T 14-10-2018 IPR022967 RNA-binding domain, S1 AMIS_15870 077d57f0859a83e35685310743f0abc5 503 SMART SM00316 210 280 4.8E-28 T 14-10-2018 IPR022967 RNA-binding domain, S1 AMIS_15870 077d57f0859a83e35685310743f0abc5 503 SMART SM00316 37 108 1.8E-16 T 14-10-2018 IPR022967 RNA-binding domain, S1 AMIS_15870 077d57f0859a83e35685310743f0abc5 503 Gene3D G3DSA:2.40.50.140 287 371 9.1E-29 T 14-10-2018 AMIS_15870 077d57f0859a83e35685310743f0abc5 503 SUPERFAMILY SSF50249 31 133 4.4E-21 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMIS_15870 077d57f0859a83e35685310743f0abc5 503 SUPERFAMILY SSF50249 111 194 1.07E-12 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMIS_15870 077d57f0859a83e35685310743f0abc5 503 Gene3D G3DSA:2.40.50.140 121 202 1.5E-9 T 14-10-2018 AMIS_15870 077d57f0859a83e35685310743f0abc5 503 Gene3D G3DSA:2.40.50.140 26 120 4.8E-23 T 14-10-2018 AMIS_15870 077d57f0859a83e35685310743f0abc5 503 PRINTS PR00681 Ribosomal protein S1 signature 232 253 1.7E-86 T 14-10-2018 AMIS_15870 077d57f0859a83e35685310743f0abc5 503 PRINTS PR00681 Ribosomal protein S1 signature 39 57 1.7E-86 T 14-10-2018 AMIS_15870 077d57f0859a83e35685310743f0abc5 503 PRINTS PR00681 Ribosomal protein S1 signature 129 145 1.7E-86 T 14-10-2018 AMIS_15870 077d57f0859a83e35685310743f0abc5 503 PRINTS PR00681 Ribosomal protein S1 signature 57 71 1.7E-86 T 14-10-2018 AMIS_15870 077d57f0859a83e35685310743f0abc5 503 PRINTS PR00681 Ribosomal protein S1 signature 146 163 1.7E-86 T 14-10-2018 AMIS_15870 077d57f0859a83e35685310743f0abc5 503 PRINTS PR00681 Ribosomal protein S1 signature 175 195 1.7E-86 T 14-10-2018 AMIS_15870 077d57f0859a83e35685310743f0abc5 503 PRINTS PR00681 Ribosomal protein S1 signature 105 124 1.7E-86 T 14-10-2018 AMIS_15870 077d57f0859a83e35685310743f0abc5 503 PRINTS PR00681 Ribosomal protein S1 signature 310 329 1.7E-86 T 14-10-2018 AMIS_15870 077d57f0859a83e35685310743f0abc5 503 PRINTS PR00681 Ribosomal protein S1 signature 349 367 1.7E-86 T 14-10-2018 AMIS_15870 077d57f0859a83e35685310743f0abc5 503 SUPERFAMILY SSF50249 280 368 1.17E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMIS_15870 077d57f0859a83e35685310743f0abc5 503 Gene3D G3DSA:2.40.50.140 207 286 1.7E-30 T 14-10-2018 AMIS_78120 39b8d253079548a53c51f810b5047ae3 423 SUPERFAMILY SSF52743 48 328 3.93E-74 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AMIS_78120 39b8d253079548a53c51f810b5047ae3 423 PRINTS PR00723 Subtilisin serine protease family (S8) signature 104 117 2.0E-18 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMIS_78120 39b8d253079548a53c51f810b5047ae3 423 PRINTS PR00723 Subtilisin serine protease family (S8) signature 65 84 2.0E-18 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMIS_78120 39b8d253079548a53c51f810b5047ae3 423 PRINTS PR00723 Subtilisin serine protease family (S8) signature 267 283 2.0E-18 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMIS_78120 39b8d253079548a53c51f810b5047ae3 423 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 268 278 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site AMIS_78120 39b8d253079548a53c51f810b5047ae3 423 TIGRFAM TIGR03921 T7SS_mycosin: type VII secretion-associated serine protease mycosin 55 376 2.1E-94 T 14-10-2018 IPR023834 Type VII secretion system peptidase S8A, mycosin AMIS_78120 39b8d253079548a53c51f810b5047ae3 423 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 70 81 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site AMIS_78120 39b8d253079548a53c51f810b5047ae3 423 Pfam PF00082 Subtilase family 65 318 3.8E-37 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AMIS_78120 39b8d253079548a53c51f810b5047ae3 423 Gene3D G3DSA:3.40.50.200 18 334 9.9E-84 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AMIS_25100 fdf2a81b14952e088b79404e46703960 199 SUPERFAMILY SSF52218 5 181 1.71E-24 T 14-10-2018 IPR029039 Flavoprotein-like superfamily AMIS_25100 fdf2a81b14952e088b79404e46703960 199 Pfam PF03358 NADPH-dependent FMN reductase 6 154 1.1E-19 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AMIS_25100 fdf2a81b14952e088b79404e46703960 199 Gene3D G3DSA:3.40.50.360 1 194 1.9E-17 T 14-10-2018 IPR029039 Flavoprotein-like superfamily AMIS_52860 78960802663ecd579ce539738926edea 214 Pfam PF00072 Response regulator receiver domain 5 116 3.7E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_52860 78960802663ecd579ce539738926edea 214 SUPERFAMILY SSF52172 2 132 5.27E-30 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_52860 78960802663ecd579ce539738926edea 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 4.0E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_52860 78960802663ecd579ce539738926edea 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 4.0E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_52860 78960802663ecd579ce539738926edea 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 4.0E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_52860 78960802663ecd579ce539738926edea 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 204 1.3E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_52860 78960802663ecd579ce539738926edea 214 SMART SM00448 3 116 6.6E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_52860 78960802663ecd579ce539738926edea 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_52860 78960802663ecd579ce539738926edea 214 SUPERFAMILY SSF46894 143 210 2.35E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_52860 78960802663ecd579ce539738926edea 214 Gene3D G3DSA:3.40.50.12740 3 210 6.5E-58 T 14-10-2018 AMIS_52860 78960802663ecd579ce539738926edea 214 SMART SM00421 148 205 6.6E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_32670 3eb5f57e2261814ba52d34e11279583f 375 Pfam PF03583 Secretory lipase 114 250 1.2E-8 T 14-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 AMIS_32670 3eb5f57e2261814ba52d34e11279583f 375 PIRSF PIRSF029171 15 375 3.2E-64 T 14-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 AMIS_32670 3eb5f57e2261814ba52d34e11279583f 375 SUPERFAMILY SSF53474 55 373 2.15E-16 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_55250 831d2707a8c0027be26088fd82e0f712 337 Pfam PF09383 NIL domain 265 334 2.9E-15 T 14-10-2018 IPR018449 NIL domain AMIS_55250 831d2707a8c0027be26088fd82e0f712 337 Pfam PF00005 ABC transporter 35 182 1.2E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_55250 831d2707a8c0027be26088fd82e0f712 337 SMART SM00930 263 335 5.8E-13 T 14-10-2018 IPR018449 NIL domain AMIS_55250 831d2707a8c0027be26088fd82e0f712 337 SMART SM00382 43 298 1.2E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_55250 831d2707a8c0027be26088fd82e0f712 337 Gene3D G3DSA:3.30.70.260 258 336 1.2E-10 T 14-10-2018 AMIS_55250 831d2707a8c0027be26088fd82e0f712 337 SUPERFAMILY SSF52540 14 245 2.86E-78 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_55250 831d2707a8c0027be26088fd82e0f712 337 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_55250 831d2707a8c0027be26088fd82e0f712 337 Gene3D G3DSA:3.40.50.300 12 257 1.1E-78 T 14-10-2018 AMIS_55250 831d2707a8c0027be26088fd82e0f712 337 SUPERFAMILY SSF55021 261 333 5.04E-11 T 14-10-2018 AMIS_45540 78a5a967d07698ea83e52d6112a97e19 405 SUPERFAMILY SSF90002 260 375 1.31E-11 T 14-10-2018 AMIS_45540 78a5a967d07698ea83e52d6112a97e19 405 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 74 185 1.7E-10 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AMIS_45540 78a5a967d07698ea83e52d6112a97e19 405 SMART SM00833 259 375 1.4E-33 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AMIS_45540 78a5a967d07698ea83e52d6112a97e19 405 Gene3D G3DSA:3.40.50.300 32 222 2.8E-13 T 14-10-2018 AMIS_45540 78a5a967d07698ea83e52d6112a97e19 405 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 261 375 4.5E-19 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AMIS_80050 d65bc15255ed93d04f1bc61bea4c1c98 147 Pfam PF00376 MerR family regulatory protein 5 41 2.5E-14 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_80050 d65bc15255ed93d04f1bc61bea4c1c98 147 Gene3D G3DSA:1.10.1660.10 1 127 6.4E-37 T 14-10-2018 AMIS_80050 d65bc15255ed93d04f1bc61bea4c1c98 147 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 39 59 3.0E-15 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_80050 d65bc15255ed93d04f1bc61bea4c1c98 147 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 16 29 3.0E-15 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_80050 d65bc15255ed93d04f1bc61bea4c1c98 147 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 5 16 3.0E-15 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_80050 d65bc15255ed93d04f1bc61bea4c1c98 147 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 4 141 3.4E-65 T 14-10-2018 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 AMIS_80050 d65bc15255ed93d04f1bc61bea4c1c98 147 ProSitePatterns PS00552 MerR-type HTH domain signature. 7 29 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_80050 d65bc15255ed93d04f1bc61bea4c1c98 147 SUPERFAMILY SSF46955 4 126 6.59E-31 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily AMIS_80050 d65bc15255ed93d04f1bc61bea4c1c98 147 Pfam PF09278 MerR, DNA binding 46 111 1.3E-19 T 14-10-2018 IPR015358 Transcription regulator MerR, DNA binding AMIS_80050 d65bc15255ed93d04f1bc61bea4c1c98 147 SMART SM00422 4 72 1.6E-27 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_77090 3bb616c4def566943fa342a8431e7140 427 Gene3D G3DSA:3.40.50.1100 69 399 1.3E-96 T 14-10-2018 AMIS_77090 3bb616c4def566943fa342a8431e7140 427 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 85 394 1.8E-60 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AMIS_77090 3bb616c4def566943fa342a8431e7140 427 Gene3D G3DSA:3.40.50.1100 122 221 1.3E-96 T 14-10-2018 AMIS_77090 3bb616c4def566943fa342a8431e7140 427 SUPERFAMILY SSF53686 12 408 1.96E-81 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMIS_77090 3bb616c4def566943fa342a8431e7140 427 TIGRFAM TIGR00260 thrC: threonine synthase 67 400 6.9E-74 T 14-10-2018 IPR004450 Threonine synthase-like AMIS_60380 11a6347ae4de261ae8ac4c37feece4e9 178 Gene3D G3DSA:3.40.140.10 27 164 1.2E-28 T 14-10-2018 AMIS_60380 11a6347ae4de261ae8ac4c37feece4e9 178 SUPERFAMILY SSF53927 31 157 2.51E-25 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AMIS_60380 11a6347ae4de261ae8ac4c37feece4e9 178 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 31 131 2.8E-15 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain AMIS_38750 3953295c44ebccd0a0ef6ef2f81d4a59 462 SUPERFAMILY SSF49785 39 156 6.45E-29 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_38750 3953295c44ebccd0a0ef6ef2f81d4a59 462 Pfam PF00754 F5/8 type C domain 41 150 1.0E-23 T 14-10-2018 IPR000421 Coagulation factor 5/8 C-terminal domain AMIS_38750 3953295c44ebccd0a0ef6ef2f81d4a59 462 Pfam PF09362 Domain of unknown function (DUF1996) 213 420 1.5E-41 T 14-10-2018 IPR018535 Domain of unknown function DUF1996 AMIS_38750 3953295c44ebccd0a0ef6ef2f81d4a59 462 Gene3D G3DSA:2.60.120.260 29 156 2.3E-36 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_18990 f3fac2fcc69a4eb7a04754a39419ca57 221 SUPERFAMILY SSF54637 11 200 3.5E-34 T 14-10-2018 IPR029069 HotDog domain superfamily AMIS_18990 f3fac2fcc69a4eb7a04754a39419ca57 221 Pfam PF03061 Thioesterase superfamily 119 177 1.5E-6 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AMIS_18990 f3fac2fcc69a4eb7a04754a39419ca57 221 Gene3D G3DSA:3.10.129.10 71 200 2.4E-52 T 14-10-2018 AMIS_18990 f3fac2fcc69a4eb7a04754a39419ca57 221 Gene3D G3DSA:1.20.58.350 22 70 2.4E-52 T 14-10-2018 AMIS_60800 a8ae724665a18b087aa6bb946edf30b2 244 Gene3D G3DSA:2.20.25.570 143 202 3.7E-77 T 14-10-2018 AMIS_60800 a8ae724665a18b087aa6bb946edf30b2 244 SUPERFAMILY SSF53335 13 230 6.63E-29 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_60800 a8ae724665a18b087aa6bb946edf30b2 244 Pfam PF13649 Methyltransferase domain 43 135 5.4E-11 T 14-10-2018 AMIS_60800 a8ae724665a18b087aa6bb946edf30b2 244 Gene3D G3DSA:3.40.50.150 10 241 3.7E-77 T 14-10-2018 AMIS_65820 c09415c14bc87276609f49a4c053e1a2 339 SUPERFAMILY SSF51735 4 158 1.31E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_65820 c09415c14bc87276609f49a4c053e1a2 339 SUPERFAMILY SSF55347 132 267 4.58E-25 T 14-10-2018 AMIS_65820 c09415c14bc87276609f49a4c053e1a2 339 Gene3D G3DSA:3.30.360.10 125 331 2.2E-100 T 14-10-2018 AMIS_65820 c09415c14bc87276609f49a4c053e1a2 339 Gene3D G3DSA:3.40.50.720 6 309 2.2E-100 T 14-10-2018 AMIS_65820 c09415c14bc87276609f49a4c053e1a2 339 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 136 214 1.0E-6 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 AMIS_65820 c09415c14bc87276609f49a4c053e1a2 339 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 6 123 1.1E-21 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AMIS_22950 13c1714018764902edc2e416fc9f5a10 118 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 76 5.6E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_22950 13c1714018764902edc2e416fc9f5a10 118 SUPERFAMILY SSF46785 7 80 1.79E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_22950 13c1714018764902edc2e416fc9f5a10 118 SMART SM00345 17 76 1.5E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_22950 13c1714018764902edc2e416fc9f5a10 118 Gene3D G3DSA:1.10.10.10 10 117 1.2E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_77060 302eaa34ad9e7a8392801bf8dbab6ddf 540 ProSitePatterns PS00296 Chaperonins cpn60 signature. 403 414 - T 14-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AMIS_77060 302eaa34ad9e7a8392801bf8dbab6ddf 540 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 523 8.7E-95 T 14-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 AMIS_77060 302eaa34ad9e7a8392801bf8dbab6ddf 540 SUPERFAMILY SSF48592 6 519 4.5E-73 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily AMIS_77060 302eaa34ad9e7a8392801bf8dbab6ddf 540 SUPERFAMILY SSF52029 184 374 1.27E-81 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily AMIS_77060 302eaa34ad9e7a8392801bf8dbab6ddf 540 PRINTS PR00298 60kDa chaperonin signature 26 52 2.4E-71 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AMIS_77060 302eaa34ad9e7a8392801bf8dbab6ddf 540 PRINTS PR00298 60kDa chaperonin signature 348 373 2.4E-71 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AMIS_77060 302eaa34ad9e7a8392801bf8dbab6ddf 540 PRINTS PR00298 60kDa chaperonin signature 82 109 2.4E-71 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AMIS_77060 302eaa34ad9e7a8392801bf8dbab6ddf 540 PRINTS PR00298 60kDa chaperonin signature 266 289 2.4E-71 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AMIS_77060 302eaa34ad9e7a8392801bf8dbab6ddf 540 PRINTS PR00298 60kDa chaperonin signature 396 417 2.4E-71 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AMIS_77060 302eaa34ad9e7a8392801bf8dbab6ddf 540 Hamap MF_00600 60 kDa chaperonin [groL]. 1 538 41.371 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AMIS_77060 302eaa34ad9e7a8392801bf8dbab6ddf 540 Gene3D G3DSA:3.50.7.10 190 370 4.6E-222 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily AMIS_77060 302eaa34ad9e7a8392801bf8dbab6ddf 540 Gene3D G3DSA:1.10.560.10 7 519 4.6E-222 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily AMIS_77060 302eaa34ad9e7a8392801bf8dbab6ddf 540 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 525 7.2E-250 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AMIS_77060 302eaa34ad9e7a8392801bf8dbab6ddf 540 SUPERFAMILY SSF54849 137 203 1.05E-26 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily AMIS_77060 302eaa34ad9e7a8392801bf8dbab6ddf 540 Gene3D G3DSA:3.30.260.10 135 408 4.6E-222 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily AMIS_32370 015aedbf8ddd76dc481f1227fd53004f 492 Pfam PF08031 Berberine and berberine like 449 491 1.4E-15 T 14-10-2018 IPR012951 Berberine/berberine-like GO:0016491|GO:0050660|GO:0055114 AMIS_32370 015aedbf8ddd76dc481f1227fd53004f 492 Gene3D G3DSA:3.30.465.50 120 491 1.6E-97 T 14-10-2018 AMIS_32370 015aedbf8ddd76dc481f1227fd53004f 492 Pfam PF01565 FAD binding domain 59 190 3.0E-29 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AMIS_32370 015aedbf8ddd76dc481f1227fd53004f 492 Gene3D G3DSA:3.30.43.10 33 111 6.5E-21 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 AMIS_32370 015aedbf8ddd76dc481f1227fd53004f 492 SUPERFAMILY SSF56176 26 223 2.24E-49 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AMIS_32370 015aedbf8ddd76dc481f1227fd53004f 492 Gene3D G3DSA:3.40.462.20 225 446 1.6E-97 T 14-10-2018 AMIS_13820 8ccf4fe1b83d8c3d97c20911b543b032 307 PIRSF PIRSF005963 4 307 7.8E-122 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AMIS_13820 8ccf4fe1b83d8c3d97c20911b543b032 307 SUPERFAMILY SSF102114 36 303 5.49E-59 T 14-10-2018 AMIS_13820 8ccf4fe1b83d8c3d97c20911b543b032 307 SMART SM00729 71 277 1.2E-11 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AMIS_13820 8ccf4fe1b83d8c3d97c20911b543b032 307 Gene3D G3DSA:3.20.20.70 75 283 2.2E-13 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_13820 8ccf4fe1b83d8c3d97c20911b543b032 307 TIGRFAM TIGR00510 lipA: lipoyl synthase 19 303 2.0E-97 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AMIS_13820 8ccf4fe1b83d8c3d97c20911b543b032 307 Pfam PF04055 Radical SAM superfamily 81 235 1.5E-10 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMIS_13820 8ccf4fe1b83d8c3d97c20911b543b032 307 Hamap MF_00206 Lipoyl synthase [lipA]. 1 307 139.096 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AMIS_4230 a36e64415133dbd7f0f59d8fc1407678 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 5.7E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_4230 a36e64415133dbd7f0f59d8fc1407678 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 5.7E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_4230 a36e64415133dbd7f0f59d8fc1407678 243 Gene3D G3DSA:3.40.50.720 2 243 3.4E-73 T 14-10-2018 AMIS_4230 a36e64415133dbd7f0f59d8fc1407678 243 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2 204 5.1E-5 T 14-10-2018 AMIS_4230 a36e64415133dbd7f0f59d8fc1407678 243 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 8 242 1.6E-59 T 14-10-2018 AMIS_4230 a36e64415133dbd7f0f59d8fc1407678 243 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMIS_4230 a36e64415133dbd7f0f59d8fc1407678 243 SUPERFAMILY SSF51735 3 243 2.12E-72 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_4230 a36e64415133dbd7f0f59d8fc1407678 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 4.4E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_4230 a36e64415133dbd7f0f59d8fc1407678 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 4.4E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_4230 a36e64415133dbd7f0f59d8fc1407678 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 4.4E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_4230 a36e64415133dbd7f0f59d8fc1407678 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 4.4E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_4230 a36e64415133dbd7f0f59d8fc1407678 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 4.4E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_4230 a36e64415133dbd7f0f59d8fc1407678 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 4.4E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_79460 a18faf45944a225cc8c503cf80c4fbf9 356 Pfam PF00672 HAMP domain 86 133 3.4E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_79460 a18faf45944a225cc8c503cf80c4fbf9 356 SMART SM00387 248 356 8.8E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_79460 a18faf45944a225cc8c503cf80c4fbf9 356 Gene3D G3DSA:3.30.565.10 210 355 1.4E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_79460 a18faf45944a225cc8c503cf80c4fbf9 356 PRINTS PR00344 Bacterial sensor protein C-terminal signature 300 310 1.7E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_79460 a18faf45944a225cc8c503cf80c4fbf9 356 PRINTS PR00344 Bacterial sensor protein C-terminal signature 317 335 1.7E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_79460 a18faf45944a225cc8c503cf80c4fbf9 356 PRINTS PR00344 Bacterial sensor protein C-terminal signature 282 296 1.7E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_79460 a18faf45944a225cc8c503cf80c4fbf9 356 SMART SM00304 86 139 8.5E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_79460 a18faf45944a225cc8c503cf80c4fbf9 356 SUPERFAMILY SSF55874 212 354 5.89E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_79460 a18faf45944a225cc8c503cf80c4fbf9 356 Pfam PF00512 His Kinase A (phospho-acceptor) domain 140 205 1.5E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_79460 a18faf45944a225cc8c503cf80c4fbf9 356 Gene3D G3DSA:1.10.287.130 90 206 5.6E-20 T 14-10-2018 AMIS_79460 a18faf45944a225cc8c503cf80c4fbf9 356 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 251 355 1.2E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_79460 a18faf45944a225cc8c503cf80c4fbf9 356 SUPERFAMILY SSF158472 86 133 2.09E-5 T 14-10-2018 AMIS_79460 a18faf45944a225cc8c503cf80c4fbf9 356 SUPERFAMILY SSF47384 123 205 1.0E-12 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_79460 a18faf45944a225cc8c503cf80c4fbf9 356 SMART SM00388 140 206 1.4E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_66580 93d15060c6d33d174c7879602fbf8222 168 SUPERFAMILY SSF88946 4 82 6.28E-14 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_66580 93d15060c6d33d174c7879602fbf8222 168 Pfam PF04542 Sigma-70 region 2 10 76 6.5E-9 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_66580 93d15060c6d33d174c7879602fbf8222 168 SUPERFAMILY SSF88659 96 154 4.49E-13 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_66580 93d15060c6d33d174c7879602fbf8222 168 TIGRFAM TIGR02983 SigE-fam_strep: RNA polymerase sigma-70 factor, sigma-E family 2 153 1.6E-45 T 14-10-2018 IPR014325 RNA polymerase sigma-E factor, actinobacteria GO:0016987 AMIS_66580 93d15060c6d33d174c7879602fbf8222 168 Gene3D G3DSA:1.10.1740.10 2 96 2.5E-10 T 14-10-2018 AMIS_66580 93d15060c6d33d174c7879602fbf8222 168 Pfam PF08281 Sigma-70, region 4 99 149 1.7E-13 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_66580 93d15060c6d33d174c7879602fbf8222 168 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 4 151 1.1E-14 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_66580 93d15060c6d33d174c7879602fbf8222 168 Gene3D G3DSA:1.10.10.10 97 155 4.1E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_37260 bb84644e5ebca0a6587fe67624c6cf84 338 SMART SM00354 1 71 2.7E-22 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_37260 bb84644e5ebca0a6587fe67624c6cf84 338 Gene3D G3DSA:3.40.50.2300 85 322 7.0E-41 T 14-10-2018 AMIS_37260 bb84644e5ebca0a6587fe67624c6cf84 338 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 47 1.8E-18 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_37260 bb84644e5ebca0a6587fe67624c6cf84 338 Gene3D G3DSA:3.40.50.2300 160 327 7.0E-41 T 14-10-2018 AMIS_37260 bb84644e5ebca0a6587fe67624c6cf84 338 SUPERFAMILY SSF47413 2 60 2.82E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_37260 bb84644e5ebca0a6587fe67624c6cf84 338 SUPERFAMILY SSF53822 58 324 6.0E-37 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_37260 bb84644e5ebca0a6587fe67624c6cf84 338 Gene3D G3DSA:1.10.260.40 1 58 6.7E-23 T 14-10-2018 AMIS_37260 bb84644e5ebca0a6587fe67624c6cf84 338 Pfam PF13377 Periplasmic binding protein-like domain 169 330 1.2E-28 T 14-10-2018 AMIS_37260 bb84644e5ebca0a6587fe67624c6cf84 338 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 AMIS_32360 a4c527dae95f466651024e90c5c690ae 69 SUPERFAMILY SSF160582 8 68 3.01E-26 T 14-10-2018 IPR038020 MbtH-like domain superfamily AMIS_32360 a4c527dae95f466651024e90c5c690ae 69 Gene3D G3DSA:3.90.820.10 3 69 4.2E-30 T 14-10-2018 AMIS_32360 a4c527dae95f466651024e90c5c690ae 69 SMART SM00923 4 56 9.1E-22 T 14-10-2018 IPR005153 MbtH-like domain AMIS_32360 a4c527dae95f466651024e90c5c690ae 69 Pfam PF03621 MbtH-like protein 8 55 5.5E-23 T 14-10-2018 IPR005153 MbtH-like domain AMIS_28110 9a3a7e8cf9641678a73ed276fd3915be 316 SUPERFAMILY SSF161098 77 303 7.59E-63 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_28110 9a3a7e8cf9641678a73ed276fd3915be 316 Gene3D G3DSA:1.10.3720.10 73 316 2.3E-71 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_28110 9a3a7e8cf9641678a73ed276fd3915be 316 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 314 2.2E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_67370 c9a8d74b59cdd29ded9142abc7be54c8 241 Pfam PF02424 ApbE family 1 85 3.4E-8 T 14-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 AMIS_67370 c9a8d74b59cdd29ded9142abc7be54c8 241 Pfam PF02424 ApbE family 87 214 2.1E-34 T 14-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 AMIS_67370 c9a8d74b59cdd29ded9142abc7be54c8 241 Gene3D G3DSA:3.10.520.20 85 240 4.4E-42 T 14-10-2018 AMIS_67370 c9a8d74b59cdd29ded9142abc7be54c8 241 Gene3D G3DSA:3.10.520.20 1 84 9.9E-12 T 14-10-2018 AMIS_67370 c9a8d74b59cdd29ded9142abc7be54c8 241 SUPERFAMILY SSF143631 1 237 3.92E-58 T 14-10-2018 IPR003374 ApbE-like superfamily AMIS_42180 bc3b1f4c54c79705e52fc1cb92df1bce 123 Pfam PF03795 YCII-related domain 1 113 4.1E-19 T 14-10-2018 IPR005545 YCII-related AMIS_42180 bc3b1f4c54c79705e52fc1cb92df1bce 123 SUPERFAMILY SSF54909 1 113 1.93E-30 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel AMIS_42180 bc3b1f4c54c79705e52fc1cb92df1bce 123 Gene3D G3DSA:3.30.70.1060 1 116 1.3E-36 T 14-10-2018 AMIS_6160 4333f1d0339c5995ed569dda0e4b1984 61 SUPERFAMILY SSF57716 4 61 5.77E-21 T 14-10-2018 AMIS_6160 4333f1d0339c5995ed569dda0e4b1984 61 Pfam PF00253 Ribosomal protein S14p/S29e 9 60 5.1E-24 T 14-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_6160 4333f1d0339c5995ed569dda0e4b1984 61 ProSitePatterns PS00527 Ribosomal protein S14 signature. 23 45 - T 14-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_6160 4333f1d0339c5995ed569dda0e4b1984 61 Hamap MF_01364_B 30S ribosomal protein S14 type Z [rpsZ]. 1 61 25.336 T 14-10-2018 IPR023053 Ribosomal protein S14, type Z AMIS_6160 4333f1d0339c5995ed569dda0e4b1984 61 Gene3D G3DSA:4.10.830.10 1 61 4.0E-30 T 14-10-2018 AMIS_35140 f02066f5f659449462a40354d7c4eed6 798 Pfam PF00759 Glycosyl hydrolase family 9 45 476 1.4E-137 T 14-10-2018 IPR001701 Glycoside hydrolase family 9 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AMIS_35140 f02066f5f659449462a40354d7c4eed6 798 SMART SM01067 503 580 2.0E-4 T 14-10-2018 IPR001956 Carbohydrate-binding module 3 GO:0005975|GO:0030248 AMIS_35140 f02066f5f659449462a40354d7c4eed6 798 Pfam PF00553 Cellulose binding domain 697 795 5.1E-32 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 AMIS_35140 f02066f5f659449462a40354d7c4eed6 798 SUPERFAMILY SSF48208 43 495 1.91E-155 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AMIS_35140 f02066f5f659449462a40354d7c4eed6 798 ProSitePatterns PS00698 Glycosyl hydrolases family 9 active sites signature 2. 453 471 - T 14-10-2018 IPR033126 Glycosyl hydrolases family 9, Asp/Glu active sites KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AMIS_35140 f02066f5f659449462a40354d7c4eed6 798 Pfam PF00942 Cellulose binding domain 509 579 2.9E-7 T 14-10-2018 IPR001956 Carbohydrate-binding module 3 GO:0005975|GO:0030248 AMIS_35140 f02066f5f659449462a40354d7c4eed6 798 SUPERFAMILY SSF49384 693 796 2.72E-31 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 AMIS_35140 f02066f5f659449462a40354d7c4eed6 798 SMART SM00637 697 795 6.5E-47 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 AMIS_35140 f02066f5f659449462a40354d7c4eed6 798 Gene3D G3DSA:2.60.40.290 691 798 2.4E-36 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 AMIS_35140 f02066f5f659449462a40354d7c4eed6 798 Gene3D G3DSA:1.50.10.10 41 494 7.5E-193 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 AMIS_35140 f02066f5f659449462a40354d7c4eed6 798 SUPERFAMILY SSF49384 502 642 8.37E-26 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 AMIS_35140 f02066f5f659449462a40354d7c4eed6 798 Gene3D G3DSA:2.60.40.710 498 640 7.2E-33 T 14-10-2018 IPR036966 Carbohydrate-binding module 3 superfamily GO:0005975|GO:0030248 AMIS_57430 15db26e116cbd1843ed76e0e4aa5b1b7 473 Gene3D G3DSA:2.30.40.10 5 471 5.0E-113 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMIS_57430 15db26e116cbd1843ed76e0e4aa5b1b7 473 SUPERFAMILY SSF51338 4 471 4.32E-28 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMIS_57430 15db26e116cbd1843ed76e0e4aa5b1b7 473 Pfam PF01979 Amidohydrolase family 53 455 1.3E-19 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AMIS_57430 15db26e116cbd1843ed76e0e4aa5b1b7 473 Gene3D G3DSA:3.20.20.140 57 443 5.0E-113 T 14-10-2018 AMIS_57430 15db26e116cbd1843ed76e0e4aa5b1b7 473 SUPERFAMILY SSF51556 57 402 3.62E-61 T 14-10-2018 IPR032466 Metal-dependent hydrolase AMIS_15620 38e4202a2d39e3f0f42fb63e2b9313f9 502 SUPERFAMILY SSF56322 19 492 9.94E-155 T 14-10-2018 IPR005801 ADC synthase GO:0009058 AMIS_15620 38e4202a2d39e3f0f42fb63e2b9313f9 502 Gene3D G3DSA:3.60.120.10 4 501 2.3E-190 T 14-10-2018 IPR005801 ADC synthase GO:0009058 AMIS_15620 38e4202a2d39e3f0f42fb63e2b9313f9 502 Pfam PF00425 chorismate binding enzyme 232 484 4.1E-99 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal AMIS_15620 38e4202a2d39e3f0f42fb63e2b9313f9 502 PRINTS PR00095 Anthranilate synthase component I signature 426 440 3.4E-24 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AMIS_15620 38e4202a2d39e3f0f42fb63e2b9313f9 502 PRINTS PR00095 Anthranilate synthase component I signature 332 345 3.4E-24 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AMIS_15620 38e4202a2d39e3f0f42fb63e2b9313f9 502 PRINTS PR00095 Anthranilate synthase component I signature 441 455 3.4E-24 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AMIS_15620 38e4202a2d39e3f0f42fb63e2b9313f9 502 PRINTS PR00095 Anthranilate synthase component I signature 346 359 3.4E-24 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AMIS_15620 38e4202a2d39e3f0f42fb63e2b9313f9 502 Pfam PF04715 Anthranilate synthase component I, N terminal region 31 170 1.8E-30 T 14-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AMIS_15620 38e4202a2d39e3f0f42fb63e2b9313f9 502 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 30 492 2.0E-170 T 14-10-2018 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AMIS_34000 153c5a35317167ef5a9cae42cb9e5541 408 Pfam PF07690 Major Facilitator Superfamily 18 304 1.6E-31 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_34000 153c5a35317167ef5a9cae42cb9e5541 408 Gene3D G3DSA:1.20.1250.20 6 214 5.8E-25 T 14-10-2018 AMIS_34000 153c5a35317167ef5a9cae42cb9e5541 408 Gene3D G3DSA:1.20.1250.20 215 401 4.2E-19 T 14-10-2018 AMIS_34000 153c5a35317167ef5a9cae42cb9e5541 408 SUPERFAMILY SSF103473 4 399 9.42E-57 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_54910 cb635ec1b75ff5b95f57d0688d18fc99 251 SUPERFAMILY SSF161098 49 234 5.76E-20 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_54910 cb635ec1b75ff5b95f57d0688d18fc99 251 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 67 238 7.5E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_54910 cb635ec1b75ff5b95f57d0688d18fc99 251 Gene3D G3DSA:1.10.3720.10 44 243 1.9E-17 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_34800 74649621ef722f5ceda18bb2de542864 385 Gene3D G3DSA:3.30.565.10 258 378 2.7E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_34800 74649621ef722f5ceda18bb2de542864 385 SUPERFAMILY SSF55874 272 378 3.01E-16 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_34800 74649621ef722f5ceda18bb2de542864 385 Pfam PF07730 Histidine kinase 181 246 9.6E-19 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMIS_71110 e7a51456e75dcfc7c5ccd316655dcffa 335 Gene3D G3DSA:3.60.10.10 107 334 9.4E-27 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AMIS_71110 e7a51456e75dcfc7c5ccd316655dcffa 335 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 112 322 1.2E-10 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase AMIS_71110 e7a51456e75dcfc7c5ccd316655dcffa 335 SUPERFAMILY SSF56219 108 326 4.32E-22 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AMIS_9480 0424d469a97155a68e4ef3e52550fb25 204 Pfam PF01725 Ham1 family 5 196 1.7E-53 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 AMIS_9480 0424d469a97155a68e4ef3e52550fb25 204 SUPERFAMILY SSF52972 3 198 8.63E-62 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AMIS_9480 0424d469a97155a68e4ef3e52550fb25 204 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 5 197 1.0E-47 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 AMIS_9480 0424d469a97155a68e4ef3e52550fb25 204 Hamap MF_01405 dITP/XTP pyrophosphatase. 3 200 45.983 T 14-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 AMIS_9480 0424d469a97155a68e4ef3e52550fb25 204 Gene3D G3DSA:3.90.950.10 1 202 1.3E-68 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AMIS_34520 af26e241b2f6daf3751c8fdae6b992c2 185 SUPERFAMILY SSF46689 5 73 3.74E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_34520 af26e241b2f6daf3751c8fdae6b992c2 185 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 55 1.9E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_34520 af26e241b2f6daf3751c8fdae6b992c2 185 Gene3D G3DSA:1.10.357.10 57 185 2.1E-17 T 14-10-2018 AMIS_34520 af26e241b2f6daf3751c8fdae6b992c2 185 SUPERFAMILY SSF48498 82 179 1.56E-13 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_34520 af26e241b2f6daf3751c8fdae6b992c2 185 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 9.7E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_34520 af26e241b2f6daf3751c8fdae6b992c2 185 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 9.7E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_34520 af26e241b2f6daf3751c8fdae6b992c2 185 Gene3D G3DSA:1.10.10.60 6 56 5.6E-16 T 14-10-2018 AMIS_39150 d37ed855b70fca3ee3c258a7e46ee479 155 Gene3D G3DSA:3.40.50.450 2 154 2.9E-36 T 14-10-2018 AMIS_39150 d37ed855b70fca3ee3c258a7e46ee479 155 SUPERFAMILY SSF102405 3 149 4.88E-29 T 14-10-2018 AMIS_39150 d37ed855b70fca3ee3c258a7e46ee479 155 Pfam PF03641 Possible lysine decarboxylase 44 110 1.8E-6 T 14-10-2018 IPR031100 LOG family AMIS_39150 d37ed855b70fca3ee3c258a7e46ee479 155 TIGRFAM TIGR00725 TIGR00725: TIGR00725 family protein 3 124 2.3E-33 T 14-10-2018 IPR005268 Conserved hypothetical protein CHP00725 AMIS_64310 511f5fab64efbf05340b234eb58e978c 417 ProSitePatterns PS00622 LuxR-type HTH domain signature. 369 396 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_64310 511f5fab64efbf05340b234eb58e978c 417 Gene3D G3DSA:1.10.10.10 323 413 7.6E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_64310 511f5fab64efbf05340b234eb58e978c 417 Pfam PF00196 Bacterial regulatory proteins, luxR family 354 407 7.6E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_64310 511f5fab64efbf05340b234eb58e978c 417 SUPERFAMILY SSF46894 346 410 2.89E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_64310 511f5fab64efbf05340b234eb58e978c 417 SMART SM00421 352 409 2.1E-25 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_64310 511f5fab64efbf05340b234eb58e978c 417 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 355 369 8.1E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_64310 511f5fab64efbf05340b234eb58e978c 417 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 385 397 8.1E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_64310 511f5fab64efbf05340b234eb58e978c 417 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 369 385 8.1E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_55380 31078b0fbee520775ffe85be9df488d6 509 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 13 420 6.1E-85 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 AMIS_55380 31078b0fbee520775ffe85be9df488d6 509 Pfam PF07690 Major Facilitator Superfamily 16 408 1.5E-56 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_55380 31078b0fbee520775ffe85be9df488d6 509 SUPERFAMILY SSF103473 206 503 2.35E-28 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_55380 31078b0fbee520775ffe85be9df488d6 509 Gene3D G3DSA:1.20.1250.20 258 504 3.0E-16 T 14-10-2018 AMIS_55380 31078b0fbee520775ffe85be9df488d6 509 SUPERFAMILY SSF103473 6 192 4.45E-46 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_55380 31078b0fbee520775ffe85be9df488d6 509 Gene3D G3DSA:1.20.1720.10 13 218 4.9E-50 T 14-10-2018 AMIS_22380 6eb53bef42b93d309f68af12254fead2 892 Gene3D G3DSA:1.10.10.10 782 892 9.0E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_22380 6eb53bef42b93d309f68af12254fead2 892 SMART SM00421 832 889 3.5E-26 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_22380 6eb53bef42b93d309f68af12254fead2 892 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 865 877 3.6E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_22380 6eb53bef42b93d309f68af12254fead2 892 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 835 849 3.6E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_22380 6eb53bef42b93d309f68af12254fead2 892 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 849 865 3.6E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_22380 6eb53bef42b93d309f68af12254fead2 892 SUPERFAMILY SSF52540 2 203 3.1E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_22380 6eb53bef42b93d309f68af12254fead2 892 Pfam PF00196 Bacterial regulatory proteins, luxR family 835 887 8.8E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_22380 6eb53bef42b93d309f68af12254fead2 892 SUPERFAMILY SSF46894 827 890 1.09E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_22380 6eb53bef42b93d309f68af12254fead2 892 ProSitePatterns PS00622 LuxR-type HTH domain signature. 849 876 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_22380 6eb53bef42b93d309f68af12254fead2 892 Pfam PF13191 AAA ATPase domain 3 142 2.8E-16 T 14-10-2018 AMIS_72330 feb83a820aeb990d7dc293f0f7f7316a 119 SUPERFAMILY SSF54427 3 114 3.06E-19 T 14-10-2018 IPR032710 NTF2-like domain superfamily AMIS_72330 feb83a820aeb990d7dc293f0f7f7316a 119 Gene3D G3DSA:3.10.450.50 1 118 1.2E-15 T 14-10-2018 AMIS_72330 feb83a820aeb990d7dc293f0f7f7316a 119 Pfam PF12680 SnoaL-like domain 11 109 1.2E-11 T 14-10-2018 IPR037401 SnoaL-like domain AMIS_19370 d9d070a10ce35f053d0663dacac96683 617 Pfam PF00082 Subtilase family 167 415 2.2E-34 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AMIS_19370 d9d070a10ce35f053d0663dacac96683 617 Gene3D G3DSA:2.60.40.10 530 616 1.6E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_19370 d9d070a10ce35f053d0663dacac96683 617 Gene3D G3DSA:2.60.40.10 439 527 4.9E-10 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_19370 d9d070a10ce35f053d0663dacac96683 617 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 377 387 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site AMIS_19370 d9d070a10ce35f053d0663dacac96683 617 PRINTS PR00723 Subtilisin serine protease family (S8) signature 167 186 1.1E-12 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMIS_19370 d9d070a10ce35f053d0663dacac96683 617 PRINTS PR00723 Subtilisin serine protease family (S8) signature 376 392 1.1E-12 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMIS_19370 d9d070a10ce35f053d0663dacac96683 617 PRINTS PR00723 Subtilisin serine protease family (S8) signature 204 217 1.1E-12 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMIS_19370 d9d070a10ce35f053d0663dacac96683 617 SUPERFAMILY SSF52743 150 436 5.63E-71 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AMIS_19370 d9d070a10ce35f053d0663dacac96683 617 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 172 183 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site AMIS_19370 d9d070a10ce35f053d0663dacac96683 617 Gene3D G3DSA:3.40.50.200 107 438 8.7E-79 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AMIS_19370 d9d070a10ce35f053d0663dacac96683 617 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 208 218 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site AMIS_46330 56b6140f706145869e12bae10da86ed8 400 Gene3D G3DSA:3.40.50.1820 1 400 2.2E-124 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_46330 56b6140f706145869e12bae10da86ed8 400 PIRSF PIRSF001112 2 400 3.0E-134 T 14-10-2018 IPR016292 Epoxide hydrolase GO:0033961 Reactome: R-HSA-211945 AMIS_46330 56b6140f706145869e12bae10da86ed8 400 Pfam PF06441 Epoxide hydrolase N terminus 12 117 6.0E-35 T 14-10-2018 IPR010497 Epoxide hydrolase, N-terminal Reactome: R-HSA-211945 AMIS_46330 56b6140f706145869e12bae10da86ed8 400 PRINTS PR00412 Epoxide hydrolase signature 373 395 1.6E-9 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_46330 56b6140f706145869e12bae10da86ed8 400 PRINTS PR00412 Epoxide hydrolase signature 341 357 1.6E-9 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_46330 56b6140f706145869e12bae10da86ed8 400 PRINTS PR00412 Epoxide hydrolase signature 108 126 1.6E-9 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_46330 56b6140f706145869e12bae10da86ed8 400 PRINTS PR00412 Epoxide hydrolase signature 137 152 1.6E-9 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_46330 56b6140f706145869e12bae10da86ed8 400 SUPERFAMILY SSF53474 5 397 2.0E-92 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_54760 35052502b5b68ec21044e4bfe7f3c4dd 380 Gene3D G3DSA:1.10.540.10 2 117 7.3E-23 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMIS_54760 35052502b5b68ec21044e4bfe7f3c4dd 380 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 232 373 1.5E-29 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMIS_54760 35052502b5b68ec21044e4bfe7f3c4dd 380 Gene3D G3DSA:2.40.110.10 120 226 1.1E-32 T 14-10-2018 AMIS_54760 35052502b5b68ec21044e4bfe7f3c4dd 380 SUPERFAMILY SSF56645 5 226 1.14E-60 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMIS_54760 35052502b5b68ec21044e4bfe7f3c4dd 380 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AMIS_54760 35052502b5b68ec21044e4bfe7f3c4dd 380 Gene3D G3DSA:1.20.140.10 228 379 1.0E-40 T 14-10-2018 AMIS_54760 35052502b5b68ec21044e4bfe7f3c4dd 380 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 214 1.3E-23 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMIS_54760 35052502b5b68ec21044e4bfe7f3c4dd 380 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 14 114 3.8E-16 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMIS_54760 35052502b5b68ec21044e4bfe7f3c4dd 380 SUPERFAMILY SSF47203 228 377 2.9E-41 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMIS_32420 a3982603c63497b11cf93844a5ac1398 862 Gene3D G3DSA:3.40.50.12780 1 392 8.1E-126 T 14-10-2018 AMIS_32420 a3982603c63497b11cf93844a5ac1398 862 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 23 423 1.9E-122 T 14-10-2018 IPR010071 Amino acid adenylation domain AMIS_32420 a3982603c63497b11cf93844a5ac1398 862 Pfam PF00550 Phosphopantetheine attachment site 503 565 2.7E-16 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain AMIS_32420 a3982603c63497b11cf93844a5ac1398 862 ProSitePatterns PS00012 Phosphopantetheine attachment site. 524 539 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site AMIS_32420 a3982603c63497b11cf93844a5ac1398 862 SUPERFAMILY SSF56801 1 513 1.44E-139 T 14-10-2018 AMIS_32420 a3982603c63497b11cf93844a5ac1398 862 Gene3D G3DSA:3.40.50.1820 493 831 3.4E-113 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_32420 a3982603c63497b11cf93844a5ac1398 862 Pfam PF00975 Thioesterase domain 588 814 3.4E-35 T 14-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 AMIS_32420 a3982603c63497b11cf93844a5ac1398 862 Pfam PF13193 AMP-binding enzyme C-terminal domain 407 477 5.8E-8 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AMIS_32420 a3982603c63497b11cf93844a5ac1398 862 SUPERFAMILY SSF47336 495 565 3.93E-19 T 14-10-2018 IPR036736 ACP-like superfamily AMIS_32420 a3982603c63497b11cf93844a5ac1398 862 SUPERFAMILY SSF53474 569 829 4.98E-60 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_32420 a3982603c63497b11cf93844a5ac1398 862 Gene3D G3DSA:3.30.300.30 393 492 4.1E-29 T 14-10-2018 AMIS_32420 a3982603c63497b11cf93844a5ac1398 862 ProSitePatterns PS00455 Putative AMP-binding domain signature. 149 160 - T 14-10-2018 IPR020845 AMP-binding, conserved site AMIS_32420 a3982603c63497b11cf93844a5ac1398 862 Pfam PF00501 AMP-binding enzyme 2 399 3.5E-90 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMIS_32420 a3982603c63497b11cf93844a5ac1398 862 SMART SM00823 Phosphopantetheine attachment site 500 569 3.0E-9 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AMIS_79870 caede06f8ada80cb94612575ee4f785a 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 3.1E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_79870 caede06f8ada80cb94612575ee4f785a 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 3.1E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_79870 caede06f8ada80cb94612575ee4f785a 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 3.1E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_79870 caede06f8ada80cb94612575ee4f785a 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 3.1E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_79870 caede06f8ada80cb94612575ee4f785a 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 3.1E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_79870 caede06f8ada80cb94612575ee4f785a 243 Gene3D G3DSA:3.40.50.720 2 242 2.8E-68 T 14-10-2018 AMIS_79870 caede06f8ada80cb94612575ee4f785a 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 1.6E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_79870 caede06f8ada80cb94612575ee4f785a 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 1.6E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_79870 caede06f8ada80cb94612575ee4f785a 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 1.6E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_79870 caede06f8ada80cb94612575ee4f785a 243 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 150 178 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMIS_79870 caede06f8ada80cb94612575ee4f785a 243 Pfam PF00106 short chain dehydrogenase 6 202 5.8E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_79870 caede06f8ada80cb94612575ee4f785a 243 SUPERFAMILY SSF51735 5 235 3.42E-55 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_10410 419284a8b3f0ff8df41458141ac5caf2 488 PRINTS PR01035 Tetracycline resistance protein signature 137 159 8.8E-10 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMIS_10410 419284a8b3f0ff8df41458141ac5caf2 488 PRINTS PR01035 Tetracycline resistance protein signature 22 38 8.8E-10 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMIS_10410 419284a8b3f0ff8df41458141ac5caf2 488 PRINTS PR01035 Tetracycline resistance protein signature 165 185 8.8E-10 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMIS_10410 419284a8b3f0ff8df41458141ac5caf2 488 PRINTS PR01035 Tetracycline resistance protein signature 107 128 8.8E-10 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMIS_10410 419284a8b3f0ff8df41458141ac5caf2 488 Pfam PF07690 Major Facilitator Superfamily 18 393 1.7E-39 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_10410 419284a8b3f0ff8df41458141ac5caf2 488 Gene3D G3DSA:1.20.1250.20 7 429 9.1E-53 T 14-10-2018 AMIS_10410 419284a8b3f0ff8df41458141ac5caf2 488 SUPERFAMILY SSF103473 9 438 2.88E-49 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_17160 1321cd8138217cb3c66436172243a935 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 68 1.2E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_17160 1321cd8138217cb3c66436172243a935 204 SUPERFAMILY SSF48498 95 203 4.05E-11 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_17160 1321cd8138217cb3c66436172243a935 204 SUPERFAMILY SSF46689 9 81 2.21E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_17160 1321cd8138217cb3c66436172243a935 204 Gene3D G3DSA:1.10.357.10 5 202 7.5E-38 T 14-10-2018 AMIS_62570 35a9b114841a6f42908144220a41ffb9 139 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 3 103 1.0E-39 T 14-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AMIS_62570 35a9b114841a6f42908144220a41ffb9 139 Pfam PF00699 Urease beta subunit 4 100 1.0E-40 T 14-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AMIS_62570 35a9b114841a6f42908144220a41ffb9 139 Gene3D G3DSA:2.10.150.10 2 114 2.6E-44 T 14-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AMIS_62570 35a9b114841a6f42908144220a41ffb9 139 Hamap MF_01954 Urease subunit beta [ureB]. 2 102 30.11 T 14-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AMIS_62570 35a9b114841a6f42908144220a41ffb9 139 SUPERFAMILY SSF51278 3 106 5.89E-45 T 14-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AMIS_35820 3fe4fc9317f0323de986d755de890055 118 Pfam PF05239 PRC-barrel domain 6 75 1.0E-5 T 14-10-2018 IPR027275 PRC-barrel domain AMIS_35820 3fe4fc9317f0323de986d755de890055 118 SUPERFAMILY SSF50346 5 105 1.16E-18 T 14-10-2018 IPR011033 PRC-barrel-like superfamily AMIS_35820 3fe4fc9317f0323de986d755de890055 118 Gene3D G3DSA:3.90.50.10 3 108 1.2E-7 T 14-10-2018 IPR014747 Bacterial photosynthetic reaction centre, H-chain, C-terminal GO:0019684|GO:0030077|GO:0045156 AMIS_70950 d7610509e02d53b8feefb0d770427b4f 196 Gene3D G3DSA:3.20.19.10 1 168 4.4E-67 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 AMIS_70950 d7610509e02d53b8feefb0d770427b4f 196 Pfam PF00694 Aconitase C-terminal domain 1 117 1.7E-26 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 AMIS_70950 d7610509e02d53b8feefb0d770427b4f 196 SUPERFAMILY SSF52016 1 187 4.51E-52 T 14-10-2018 AMIS_70950 d7610509e02d53b8feefb0d770427b4f 196 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 180 9.1E-61 T 14-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 AMIS_70950 d7610509e02d53b8feefb0d770427b4f 196 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 191 39.473 T 14-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 AMIS_40320 7f72b0447b1f4257c53efee3e6a0d4b7 417 SMART SM00304 161 213 1.6E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_40320 7f72b0447b1f4257c53efee3e6a0d4b7 417 SMART SM00388 214 272 8.6E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_40320 7f72b0447b1f4257c53efee3e6a0d4b7 417 Gene3D G3DSA:1.10.287.130 158 266 3.0E-18 T 14-10-2018 AMIS_40320 7f72b0447b1f4257c53efee3e6a0d4b7 417 Gene3D G3DSA:3.30.565.10 273 414 5.8E-11 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_40320 7f72b0447b1f4257c53efee3e6a0d4b7 417 SMART SM00387 314 416 2.9E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_40320 7f72b0447b1f4257c53efee3e6a0d4b7 417 Pfam PF00672 HAMP domain 161 210 2.3E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_40320 7f72b0447b1f4257c53efee3e6a0d4b7 417 SUPERFAMILY SSF55874 267 413 9.86E-12 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_40320 7f72b0447b1f4257c53efee3e6a0d4b7 417 Pfam PF00512 His Kinase A (phospho-acceptor) domain 216 269 2.2E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_40320 7f72b0447b1f4257c53efee3e6a0d4b7 417 SUPERFAMILY SSF158472 161 211 2.35E-6 T 14-10-2018 AMIS_40320 7f72b0447b1f4257c53efee3e6a0d4b7 417 SUPERFAMILY SSF47384 198 262 1.79E-8 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_70580 be0ccfb6c4b39898ebd827e1f255b42c 204 Pfam PF13419 Haloacid dehalogenase-like hydrolase 93 182 4.1E-7 T 14-10-2018 AMIS_70580 be0ccfb6c4b39898ebd827e1f255b42c 204 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 101 114 1.8E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMIS_70580 be0ccfb6c4b39898ebd827e1f255b42c 204 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 5 16 1.8E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMIS_70580 be0ccfb6c4b39898ebd827e1f255b42c 204 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 131 147 1.8E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMIS_70580 be0ccfb6c4b39898ebd827e1f255b42c 204 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 78 182 3.6E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMIS_70580 be0ccfb6c4b39898ebd827e1f255b42c 204 SUPERFAMILY SSF56784 6 190 1.57E-28 T 14-10-2018 IPR036412 HAD-like superfamily AMIS_70580 be0ccfb6c4b39898ebd827e1f255b42c 204 Gene3D G3DSA:3.40.50.1000 5 199 4.3E-29 T 14-10-2018 IPR023214 HAD superfamily AMIS_29190 62f2ea4393e604b56a0465ef027906fe 387 Pfam PF04261 Dyp-type peroxidase family 54 376 1.0E-72 T 14-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 AMIS_29190 62f2ea4393e604b56a0465ef027906fe 387 SUPERFAMILY SSF54909 49 381 1.97E-76 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel AMIS_29190 62f2ea4393e604b56a0465ef027906fe 387 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 54 376 1.0E-64 T 14-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 AMIS_74700 754ccdfc0740ea082b04e2748920aeba 474 SUPERFAMILY SSF53720 18 473 1.83E-163 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMIS_74700 754ccdfc0740ea082b04e2748920aeba 474 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 254 261 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AMIS_74700 754ccdfc0740ea082b04e2748920aeba 474 Gene3D G3DSA:3.40.309.10 259 448 2.5E-175 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AMIS_74700 754ccdfc0740ea082b04e2748920aeba 474 Pfam PF00171 Aldehyde dehydrogenase family 33 473 5.5E-166 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AMIS_74700 754ccdfc0740ea082b04e2748920aeba 474 Gene3D G3DSA:3.40.605.10 24 473 2.5E-175 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AMIS_48440 e3b9cb9872639cfe7ec57d71e1a96c5a 367 Gene3D G3DSA:2.120.10.30 142 367 1.4E-7 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AMIS_48440 e3b9cb9872639cfe7ec57d71e1a96c5a 367 SUPERFAMILY SSF101898 27 365 2.88E-14 T 14-10-2018 AMIS_17270 08bc37467201ff4bb6deb91964ef346a 388 Pfam PF07687 Peptidase dimerisation domain 172 262 7.1E-7 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain AMIS_17270 08bc37467201ff4bb6deb91964ef346a 388 PIRSF PIRSF037226 9 385 1.0E-125 T 14-10-2018 IPR017144 Peptidase M20A, amidohydrolase, predicted AMIS_17270 08bc37467201ff4bb6deb91964ef346a 388 Pfam PF01546 Peptidase family M20/M25/M40 88 348 7.4E-8 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 AMIS_17270 08bc37467201ff4bb6deb91964ef346a 388 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 22 352 3.4E-60 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 AMIS_17270 08bc37467201ff4bb6deb91964ef346a 388 SUPERFAMILY SSF55031 170 275 1.83E-20 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AMIS_17270 08bc37467201ff4bb6deb91964ef346a 388 SUPERFAMILY SSF53187 14 376 8.5E-62 T 14-10-2018 AMIS_17270 08bc37467201ff4bb6deb91964ef346a 388 Gene3D G3DSA:3.40.630.10 23 364 4.3E-123 T 14-10-2018 AMIS_17270 08bc37467201ff4bb6deb91964ef346a 388 Gene3D G3DSA:3.30.70.360 169 286 4.3E-123 T 14-10-2018 AMIS_13580 8f7aec9f064797a4f1e81582df49a0dc 143 Pfam PF01047 MarR family 36 93 2.7E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_13580 8f7aec9f064797a4f1e81582df49a0dc 143 Gene3D G3DSA:1.10.10.10 9 140 9.4E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_13580 8f7aec9f064797a4f1e81582df49a0dc 143 SMART SM00347 29 129 2.2E-20 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_13580 8f7aec9f064797a4f1e81582df49a0dc 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 85 2.5E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_13580 8f7aec9f064797a4f1e81582df49a0dc 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 105 2.5E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_13580 8f7aec9f064797a4f1e81582df49a0dc 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 53 69 2.5E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_13580 8f7aec9f064797a4f1e81582df49a0dc 143 SUPERFAMILY SSF46785 4 140 6.11E-35 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_44580 75d2f7fdcf396a765c18b64646dd0f93 536 SUPERFAMILY SSF50370 41 176 1.19E-37 T 14-10-2018 IPR035992 Ricin B-like lectins AMIS_44580 75d2f7fdcf396a765c18b64646dd0f93 536 Gene3D G3DSA:2.80.10.50 84 132 1.1E-11 T 14-10-2018 AMIS_44580 75d2f7fdcf396a765c18b64646dd0f93 536 Gene3D G3DSA:2.80.10.50 29 83 2.0E-10 T 14-10-2018 AMIS_44580 75d2f7fdcf396a765c18b64646dd0f93 536 SMART SM00458 42 176 1.1E-6 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_44580 75d2f7fdcf396a765c18b64646dd0f93 536 Pfam PF14200 Ricin-type beta-trefoil lectin domain-like 78 162 4.5E-20 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_44580 75d2f7fdcf396a765c18b64646dd0f93 536 SUPERFAMILY SSF51126 259 535 3.14E-7 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor AMIS_44580 75d2f7fdcf396a765c18b64646dd0f93 536 Gene3D G3DSA:2.80.10.50 133 264 6.1E-10 T 14-10-2018 AMIS_60960 b37528bab572ccb858e99c1775572b7c 585 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 577 1.8E-164 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 AMIS_60960 b37528bab572ccb858e99c1775572b7c 585 SUPERFAMILY SSF52540 4 533 5.74E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_60960 b37528bab572ccb858e99c1775572b7c 585 Gene3D G3DSA:3.40.50.300 1 277 6.9E-37 T 14-10-2018 AMIS_60960 b37528bab572ccb858e99c1775572b7c 585 Gene3D G3DSA:3.40.50.300 278 578 9.3E-52 T 14-10-2018 AMIS_60960 b37528bab572ccb858e99c1775572b7c 585 PIRSF PIRSF003128 1 582 6.9E-158 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 AMIS_60960 b37528bab572ccb858e99c1775572b7c 585 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 535 3.2E-12 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal AMIS_60960 b37528bab572ccb858e99c1775572b7c 585 SUPERFAMILY SSF52540 1 223 4.96E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_58490 7db3bfe4f6f8af24adc7eb07f94089c5 231 SUPERFAMILY SSF52172 2 168 6.69E-34 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_58490 7db3bfe4f6f8af24adc7eb07f94089c5 231 Gene3D G3DSA:3.40.50.2300 1 141 1.7E-30 T 14-10-2018 AMIS_58490 7db3bfe4f6f8af24adc7eb07f94089c5 231 Pfam PF00072 Response regulator receiver domain 4 115 6.8E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_58490 7db3bfe4f6f8af24adc7eb07f94089c5 231 PIRSF PIRSF006171 1 226 6.5E-69 T 14-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 AMIS_58490 7db3bfe4f6f8af24adc7eb07f94089c5 231 SUPERFAMILY SSF46785 174 229 2.62E-5 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_58490 7db3bfe4f6f8af24adc7eb07f94089c5 231 SMART SM00448 2 115 1.4E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_58490 7db3bfe4f6f8af24adc7eb07f94089c5 231 Gene3D G3DSA:1.10.10.10 158 225 6.0E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_11100 d9c744c451afa875f96aecad24017b31 155 TIGRFAM TIGR02133 RPI_actino: ribose 5-phosphate isomerase 1 147 1.0E-60 T 14-10-2018 IPR011860 Ribose 5-phosphate isomerase GO:0004751 AMIS_11100 d9c744c451afa875f96aecad24017b31 155 Pfam PF02502 Ribose/Galactose Isomerase 4 142 6.6E-45 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 AMIS_11100 d9c744c451afa875f96aecad24017b31 155 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 4 147 5.7E-51 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 AMIS_11100 d9c744c451afa875f96aecad24017b31 155 Gene3D G3DSA:3.40.1400.10 1 155 8.8E-57 T 14-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 AMIS_11100 d9c744c451afa875f96aecad24017b31 155 PIRSF PIRSF005384 1 149 7.9E-48 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 AMIS_11100 d9c744c451afa875f96aecad24017b31 155 SUPERFAMILY SSF89623 1 153 1.83E-49 T 14-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 AMIS_31960 8a05583824ac3263d73d0b204b66c154 483 Gene3D G3DSA:1.10.579.10 297 420 1.1E-47 T 14-10-2018 AMIS_31960 8a05583824ac3263d73d0b204b66c154 483 Gene3D G3DSA:3.40.50.620 6 204 1.1E-81 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMIS_31960 8a05583824ac3263d73d0b204b66c154 483 Gene3D G3DSA:1.25.40.80 103 293 1.1E-81 T 14-10-2018 AMIS_31960 8a05583824ac3263d73d0b204b66c154 483 SUPERFAMILY SSF48173 203 469 3.53E-48 T 14-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 AMIS_31960 8a05583824ac3263d73d0b204b66c154 483 Gene3D G3DSA:1.10.10.1710 421 481 1.4E-15 T 14-10-2018 AMIS_31960 8a05583824ac3263d73d0b204b66c154 483 Pfam PF04244 Deoxyribodipyrimidine photo-lyase-related protein 5 185 2.0E-34 T 14-10-2018 IPR007357 Deoxyribodipyrimidine photolyase-related protein AMIS_78430 0b5efd25a5188f7cf8f6339a65cc840d 768 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 145 163 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site AMIS_78430 0b5efd25a5188f7cf8f6339a65cc840d 768 SUPERFAMILY SSF51120 121 252 1.77E-23 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_78430 0b5efd25a5188f7cf8f6339a65cc840d 768 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 194 208 1.2 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_78430 0b5efd25a5188f7cf8f6339a65cc840d 768 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 372 384 0.18 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_78430 0b5efd25a5188f7cf8f6339a65cc840d 768 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 344 358 0.48 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_78430 0b5efd25a5188f7cf8f6339a65cc840d 768 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 440 457 0.0069 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_78430 0b5efd25a5188f7cf8f6339a65cc840d 768 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 296 304 8.3 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_78430 0b5efd25a5188f7cf8f6339a65cc840d 768 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 315 331 0.0028 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_78430 0b5efd25a5188f7cf8f6339a65cc840d 768 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 567 580 0.43 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_78430 0b5efd25a5188f7cf8f6339a65cc840d 768 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 225 241 7.3 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_78430 0b5efd25a5188f7cf8f6339a65cc840d 768 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 459 475 0.13 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_78430 0b5efd25a5188f7cf8f6339a65cc840d 768 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 621 637 0.8 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_78430 0b5efd25a5188f7cf8f6339a65cc840d 768 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 509 523 31.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_78430 0b5efd25a5188f7cf8f6339a65cc840d 768 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 728 739 52.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_78430 0b5efd25a5188f7cf8f6339a65cc840d 768 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 587 598 8.9 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_78430 0b5efd25a5188f7cf8f6339a65cc840d 768 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 149 164 0.018 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_78430 0b5efd25a5188f7cf8f6339a65cc840d 768 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 278 290 21.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_78430 0b5efd25a5188f7cf8f6339a65cc840d 768 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 167 183 6.7E-4 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_78430 0b5efd25a5188f7cf8f6339a65cc840d 768 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 477 491 0.01 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_78430 0b5efd25a5188f7cf8f6339a65cc840d 768 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 121 138 0.01 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_78430 0b5efd25a5188f7cf8f6339a65cc840d 768 Gene3D G3DSA:2.150.10.10 470 558 9.3E-10 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_78430 0b5efd25a5188f7cf8f6339a65cc840d 768 Gene3D G3DSA:2.150.10.10 172 272 3.9E-14 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_78430 0b5efd25a5188f7cf8f6339a65cc840d 768 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 338 356 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site AMIS_78430 0b5efd25a5188f7cf8f6339a65cc840d 768 SUPERFAMILY SSF51120 344 503 1.87E-20 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_78430 0b5efd25a5188f7cf8f6339a65cc840d 768 Gene3D G3DSA:2.150.10.10 332 417 5.0E-7 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_78430 0b5efd25a5188f7cf8f6339a65cc840d 768 SUPERFAMILY SSF51120 470 661 1.57E-15 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_78430 0b5efd25a5188f7cf8f6339a65cc840d 768 PRINTS PR00313 NodO calcium binding signature 167 175 5.9E-11 T 14-10-2018 AMIS_78430 0b5efd25a5188f7cf8f6339a65cc840d 768 PRINTS PR00313 NodO calcium binding signature 194 202 5.9E-11 T 14-10-2018 AMIS_78430 0b5efd25a5188f7cf8f6339a65cc840d 768 PRINTS PR00313 NodO calcium binding signature 212 221 5.9E-11 T 14-10-2018 AMIS_78430 0b5efd25a5188f7cf8f6339a65cc840d 768 PRINTS PR00313 NodO calcium binding signature 155 166 5.9E-11 T 14-10-2018 AMIS_78430 0b5efd25a5188f7cf8f6339a65cc840d 768 Gene3D G3DSA:2.150.10.10 273 331 1.6E-10 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_78430 0b5efd25a5188f7cf8f6339a65cc840d 768 Gene3D G3DSA:2.150.10.10 118 171 4.4E-14 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_78430 0b5efd25a5188f7cf8f6339a65cc840d 768 Gene3D G3DSA:2.150.10.10 559 703 8.3E-7 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_78430 0b5efd25a5188f7cf8f6339a65cc840d 768 Gene3D G3DSA:2.150.10.10 418 469 4.5E-14 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_78160 e86a9e7d5732475c1d0dcd10876a20e0 276 SUPERFAMILY SSF48150 29 235 1.02E-64 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AMIS_78160 e86a9e7d5732475c1d0dcd10876a20e0 276 TIGRFAM TIGR01083 nth: endonuclease III 30 220 4.7E-73 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 AMIS_78160 e86a9e7d5732475c1d0dcd10876a20e0 276 PIRSF PIRSF001435 27 237 4.0E-45 T 14-10-2018 AMIS_78160 e86a9e7d5732475c1d0dcd10876a20e0 276 Gene3D G3DSA:1.10.1670.10 41 229 1.5E-71 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 AMIS_78160 e86a9e7d5732475c1d0dcd10876a20e0 276 SMART SM00525 212 232 1.1E-5 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 AMIS_78160 e86a9e7d5732475c1d0dcd10876a20e0 276 Pfam PF00633 Helix-hairpin-helix motif 125 152 4.5E-9 T 14-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 AMIS_78160 e86a9e7d5732475c1d0dcd10876a20e0 276 SMART SM00478 64 211 2.0E-56 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AMIS_78160 e86a9e7d5732475c1d0dcd10876a20e0 276 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 60 194 1.6E-19 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AMIS_78160 e86a9e7d5732475c1d0dcd10876a20e0 276 ProSitePatterns PS01155 Endonuclease III family signature. 128 157 - T 14-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 AMIS_78160 e86a9e7d5732475c1d0dcd10876a20e0 276 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 213 229 2.3E-4 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 AMIS_78160 e86a9e7d5732475c1d0dcd10876a20e0 276 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 213 229 - T 14-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AMIS_78160 e86a9e7d5732475c1d0dcd10876a20e0 276 Hamap MF_00942 Endonuclease III [nth]. 26 235 35.744 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 AMIS_78160 e86a9e7d5732475c1d0dcd10876a20e0 276 Gene3D G3DSA:1.10.340.30 47 158 1.5E-71 T 14-10-2018 AMIS_17920 da59922d3efa72788e826610e69afb7a 655 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 142 434 2.8E-8 T 14-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 AMIS_17920 da59922d3efa72788e826610e69afb7a 655 SUPERFAMILY SSF53649 140 411 4.49E-18 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AMIS_17920 da59922d3efa72788e826610e69afb7a 655 Pfam PF04020 Mycobacterial 4 TMS phage holin, superfamily IV 4 104 6.5E-13 T 14-10-2018 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV AMIS_17920 da59922d3efa72788e826610e69afb7a 655 Gene3D G3DSA:3.40.720.10 121 443 9.4E-22 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AMIS_50530 4d6935846c101cb73b5664d2116eb548 303 Gene3D G3DSA:2.30.110.10 6 141 5.8E-50 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AMIS_50530 4d6935846c101cb73b5664d2116eb548 303 SUPERFAMILY SSF50475 32 154 1.74E-7 T 14-10-2018 AMIS_50530 4d6935846c101cb73b5664d2116eb548 303 Gene3D G3DSA:1.20.120.520 144 302 2.1E-26 T 14-10-2018 AMIS_50530 4d6935846c101cb73b5664d2116eb548 303 Pfam PF04075 F420H(2)-dependent quinone reductase 13 139 3.0E-36 T 14-10-2018 IPR004378 F420H(2)-dependent quinone reductase GO:0016491|GO:0055114 AMIS_50530 4d6935846c101cb73b5664d2116eb548 303 Pfam PF01814 Hemerythrin HHE cation binding domain 154 292 2.2E-18 T 14-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 AMIS_50530 4d6935846c101cb73b5664d2116eb548 303 TIGRFAM TIGR00026 hi_GC_TIGR00026: deazaflavin-dependent oxidoreductase, nitroreductase family 28 139 6.1E-29 T 14-10-2018 IPR004378 F420H(2)-dependent quinone reductase GO:0016491|GO:0055114 AMIS_44120 8773b7b5cdc104327279bf5d3a96ca22 192 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 18 173 8.9E-24 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_44120 8773b7b5cdc104327279bf5d3a96ca22 192 Gene3D G3DSA:1.10.10.10 82 177 1.9E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_44120 8773b7b5cdc104327279bf5d3a96ca22 192 Gene3D G3DSA:1.10.1740.10 4 81 4.5E-26 T 14-10-2018 AMIS_44120 8773b7b5cdc104327279bf5d3a96ca22 192 Pfam PF08281 Sigma-70, region 4 122 170 4.1E-13 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_44120 8773b7b5cdc104327279bf5d3a96ca22 192 SUPERFAMILY SSF88946 3 99 1.29E-25 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_44120 8773b7b5cdc104327279bf5d3a96ca22 192 Pfam PF04542 Sigma-70 region 2 23 90 5.7E-20 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_44120 8773b7b5cdc104327279bf5d3a96ca22 192 SUPERFAMILY SSF88659 113 174 1.87E-14 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_13150 ba7ba4fb7bd43fb736b8967745e197a0 471 Gene3D G3DSA:1.10.10.350 374 471 2.1E-25 T 14-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AMIS_13150 ba7ba4fb7bd43fb736b8967745e197a0 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 9 21 4.8E-20 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AMIS_13150 ba7ba4fb7bd43fb736b8967745e197a0 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 38 51 4.8E-20 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AMIS_13150 ba7ba4fb7bd43fb736b8967745e197a0 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 177 187 4.8E-20 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AMIS_13150 ba7ba4fb7bd43fb736b8967745e197a0 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 23 34 4.8E-20 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AMIS_13150 ba7ba4fb7bd43fb736b8967745e197a0 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 193 201 4.8E-20 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AMIS_13150 ba7ba4fb7bd43fb736b8967745e197a0 471 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 5 468 28.236 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AMIS_13150 ba7ba4fb7bd43fb736b8967745e197a0 471 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 5 465 9.8E-121 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AMIS_13150 ba7ba4fb7bd43fb736b8967745e197a0 471 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 23 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMIS_13150 ba7ba4fb7bd43fb736b8967745e197a0 471 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 6 303 2.6E-73 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 AMIS_13150 ba7ba4fb7bd43fb736b8967745e197a0 471 Gene3D G3DSA:3.40.50.620 2 312 1.6E-106 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMIS_13150 ba7ba4fb7bd43fb736b8967745e197a0 471 SUPERFAMILY SSF52374 6 297 7.51E-90 T 14-10-2018 AMIS_13150 ba7ba4fb7bd43fb736b8967745e197a0 471 SUPERFAMILY SSF48163 298 467 3.92E-37 T 14-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AMIS_16570 1a0cdffbb95abcc407314d1b329fdaf1 902 Pfam PF00486 Transcriptional regulatory protein, C terminal 30 102 4.6E-5 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_16570 1a0cdffbb95abcc407314d1b329fdaf1 902 SUPERFAMILY SSF46894 9 102 3.4E-11 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_16570 1a0cdffbb95abcc407314d1b329fdaf1 902 Gene3D G3DSA:1.25.40.10 664 877 2.7E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_16570 1a0cdffbb95abcc407314d1b329fdaf1 902 SUPERFAMILY SSF48452 707 876 5.22E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_16570 1a0cdffbb95abcc407314d1b329fdaf1 902 Gene3D G3DSA:1.10.10.10 1 104 6.2E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_16570 1a0cdffbb95abcc407314d1b329fdaf1 902 PRINTS PR00364 Disease resistance protein signature 270 285 2.2E-8 T 14-10-2018 AMIS_16570 1a0cdffbb95abcc407314d1b329fdaf1 902 PRINTS PR00364 Disease resistance protein signature 438 452 2.2E-8 T 14-10-2018 AMIS_16570 1a0cdffbb95abcc407314d1b329fdaf1 902 PRINTS PR00364 Disease resistance protein signature 350 364 2.2E-8 T 14-10-2018 AMIS_16570 1a0cdffbb95abcc407314d1b329fdaf1 902 SMART SM01043 104 231 2.8E-12 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain AMIS_16570 1a0cdffbb95abcc407314d1b329fdaf1 902 SUPERFAMILY SSF52540 249 503 5.82E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_16570 1a0cdffbb95abcc407314d1b329fdaf1 902 Pfam PF00931 NB-ARC domain 259 506 4.3E-13 T 14-10-2018 IPR002182 NB-ARC GO:0043531 Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-6798695|Reactome: R-HSA-6803207|Reactome: R-HSA-8953750 AMIS_16570 1a0cdffbb95abcc407314d1b329fdaf1 902 SUPERFAMILY SSF48452 120 247 5.31E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_16570 1a0cdffbb95abcc407314d1b329fdaf1 902 SMART SM00862 22 102 1.8E-5 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_16570 1a0cdffbb95abcc407314d1b329fdaf1 902 Pfam PF03704 Bacterial transcriptional activator domain 119 229 2.2E-14 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain AMIS_16570 1a0cdffbb95abcc407314d1b329fdaf1 902 Gene3D G3DSA:3.40.50.300 237 394 5.9E-25 T 14-10-2018 AMIS_36520 344cd25eb221d6753142e3544dfe1795 278 Pfam PF09339 IclR helix-turn-helix domain 32 83 2.3E-15 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AMIS_36520 344cd25eb221d6753142e3544dfe1795 278 SUPERFAMILY SSF55781 95 273 6.34E-54 T 14-10-2018 AMIS_36520 344cd25eb221d6753142e3544dfe1795 278 Gene3D G3DSA:1.10.10.10 20 96 1.5E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_36520 344cd25eb221d6753142e3544dfe1795 278 SUPERFAMILY SSF46785 30 102 7.53E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_36520 344cd25eb221d6753142e3544dfe1795 278 Gene3D G3DSA:3.30.450.40 97 277 9.0E-67 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_36520 344cd25eb221d6753142e3544dfe1795 278 SMART SM00346 30 118 6.7E-32 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AMIS_36520 344cd25eb221d6753142e3544dfe1795 278 Pfam PF01614 Bacterial transcriptional regulator 145 271 1.0E-39 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal AMIS_36520 344cd25eb221d6753142e3544dfe1795 278 TIGRFAM TIGR02431 pcaR_pcaU: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family 29 273 6.7E-102 T 14-10-2018 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR GO:0003677|GO:0045893|GO:0046278 AMIS_7830 2596df5f8164c60067d4809b26a80c07 173 Pfam PF00583 Acetyltransferase (GNAT) family 44 139 1.7E-13 T 14-10-2018 IPR000182 GNAT domain AMIS_7830 2596df5f8164c60067d4809b26a80c07 173 Gene3D G3DSA:3.40.630.30 3 171 7.6E-35 T 14-10-2018 AMIS_7830 2596df5f8164c60067d4809b26a80c07 173 SUPERFAMILY SSF55729 4 168 7.72E-28 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_13500 0dbaf2217b7891f461ee110d4bef124a 452 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 235 250 - T 14-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AMIS_13500 0dbaf2217b7891f461ee110d4bef124a 452 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 18 101 2.0E-25 T 14-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AMIS_13500 0dbaf2217b7891f461ee110d4bef124a 452 SMART SM01230 107 362 5.4E-120 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMIS_13500 0dbaf2217b7891f461ee110d4bef124a 452 Gene3D G3DSA:3.30.590.10 110 451 2.1E-118 T 14-10-2018 AMIS_13500 0dbaf2217b7891f461ee110d4bef124a 452 Gene3D G3DSA:3.10.20.70 4 109 5.5E-33 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMIS_13500 0dbaf2217b7891f461ee110d4bef124a 452 Pfam PF00120 Glutamine synthetase, catalytic domain 108 448 5.4E-123 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMIS_13500 0dbaf2217b7891f461ee110d4bef124a 452 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 10 449 3.6E-129 T 14-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMIS_13500 0dbaf2217b7891f461ee110d4bef124a 452 SUPERFAMILY SSF55931 109 449 3.34E-113 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AMIS_13500 0dbaf2217b7891f461ee110d4bef124a 452 SUPERFAMILY SSF54368 10 104 7.59E-28 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMIS_4510 f507650681a68f1373d2f915ca45eedf 403 Gene3D G3DSA:1.25.40.10 4 230 4.0E-29 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_4510 f507650681a68f1373d2f915ca45eedf 403 SUPERFAMILY SSF103473 226 399 9.42E-8 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_4510 f507650681a68f1373d2f915ca45eedf 403 SMART SM00028 69 102 9.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_4510 f507650681a68f1373d2f915ca45eedf 403 SMART SM00028 35 68 42.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_4510 f507650681a68f1373d2f915ca45eedf 403 SMART SM00028 138 171 290.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_4510 f507650681a68f1373d2f915ca45eedf 403 Pfam PF14559 Tetratricopeptide repeat 14 75 1.6E-5 T 14-10-2018 AMIS_4510 f507650681a68f1373d2f915ca45eedf 403 SUPERFAMILY SSF48452 6 175 4.43E-23 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_5720 0d5a573273ac84bb479c164b0370a7f1 288 Pfam PF01435 Peptidase family M48 69 281 5.0E-34 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AMIS_5720 0d5a573273ac84bb479c164b0370a7f1 288 Hamap MF_00188 Protease HtpX [htpX]. 8 283 27.36 T 14-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 AMIS_5720 0d5a573273ac84bb479c164b0370a7f1 288 Gene3D G3DSA:3.30.2010.10 63 153 3.3E-27 T 14-10-2018 AMIS_21330 574d0f299f328fa7448c40caaebb0008 120 SUPERFAMILY SSF52980 4 90 3.54E-14 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AMIS_21330 574d0f299f328fa7448c40caaebb0008 120 ProDom PD015874 RESOLVASE HOLLIDAY JUNCTION ARCHAEAL HOLLIDAY-JUNCTION TYPE MJ0497 ORF-C21_024 PF1503 NEQ424 18 83 1.0E-5 T 14-10-2018 IPR014428 Holliday junction resolvase Hjc, archaeal AMIS_21330 574d0f299f328fa7448c40caaebb0008 120 Gene3D G3DSA:3.40.1350.10 3 110 2.1E-12 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 AMIS_21330 574d0f299f328fa7448c40caaebb0008 120 Pfam PF01870 Archaeal holliday junction resolvase (hjc) 13 84 1.4E-10 T 14-10-2018 IPR002732 Holliday junction resolvase Hjc AMIS_15950 19501ca6484fa3635837a8b4dc409abc 209 Gene3D G3DSA:3.90.226.10 33 209 1.2E-37 T 14-10-2018 AMIS_15950 19501ca6484fa3635837a8b4dc409abc 209 SUPERFAMILY SSF52096 36 206 3.85E-32 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMIS_15950 19501ca6484fa3635837a8b4dc409abc 209 Pfam PF00574 Clp protease 38 206 1.7E-28 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA AMIS_15950 19501ca6484fa3635837a8b4dc409abc 209 PRINTS PR00127 Clp protease catalytic subunit P signature 182 201 2.1E-10 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMIS_15950 19501ca6484fa3635837a8b4dc409abc 209 PRINTS PR00127 Clp protease catalytic subunit P signature 74 94 2.1E-10 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMIS_15950 19501ca6484fa3635837a8b4dc409abc 209 PRINTS PR00127 Clp protease catalytic subunit P signature 35 50 2.1E-10 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMIS_15950 19501ca6484fa3635837a8b4dc409abc 209 PRINTS PR00127 Clp protease catalytic subunit P signature 124 143 2.1E-10 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMIS_38500 cebed02b8ce33a8807c9003d85ef24d6 818 SUPERFAMILY SSF56014 631 796 2.22E-47 T 14-10-2018 AMIS_38500 cebed02b8ce33a8807c9003d85ef24d6 818 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 676 692 - T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMIS_38500 cebed02b8ce33a8807c9003d85ef24d6 818 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 630 766 1.1E-21 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMIS_38500 cebed02b8ce33a8807c9003d85ef24d6 818 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 559 621 1.5E-14 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMIS_38500 cebed02b8ce33a8807c9003d85ef24d6 818 Gene3D G3DSA:3.50.50.60 113 244 8.1E-84 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_38500 cebed02b8ce33a8807c9003d85ef24d6 818 Gene3D G3DSA:3.90.480.20 519 632 1.4E-6 T 14-10-2018 AMIS_38500 cebed02b8ce33a8807c9003d85ef24d6 818 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 3.3E-15 T 14-10-2018 AMIS_38500 cebed02b8ce33a8807c9003d85ef24d6 818 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 263 285 3.3E-15 T 14-10-2018 AMIS_38500 cebed02b8ce33a8807c9003d85ef24d6 818 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 3.3E-15 T 14-10-2018 AMIS_38500 cebed02b8ce33a8807c9003d85ef24d6 818 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 151 169 3.3E-15 T 14-10-2018 AMIS_38500 cebed02b8ce33a8807c9003d85ef24d6 818 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 237 253 3.3E-15 T 14-10-2018 AMIS_38500 cebed02b8ce33a8807c9003d85ef24d6 818 SUPERFAMILY SSF55124 521 638 5.4E-22 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMIS_38500 cebed02b8ce33a8807c9003d85ef24d6 818 Gene3D G3DSA:3.30.390.30 323 396 2.0E-8 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AMIS_38500 cebed02b8ce33a8807c9003d85ef24d6 818 SUPERFAMILY SSF51905 151 310 2.12E-25 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_38500 cebed02b8ce33a8807c9003d85ef24d6 818 Gene3D G3DSA:3.30.413.10 633 794 1.5E-33 T 14-10-2018 AMIS_38500 cebed02b8ce33a8807c9003d85ef24d6 818 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 287 1.7E-52 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMIS_38500 cebed02b8ce33a8807c9003d85ef24d6 818 Gene3D G3DSA:1.10.10.1100 421 472 1.2E-9 T 14-10-2018 AMIS_38500 cebed02b8ce33a8807c9003d85ef24d6 818 Pfam PF04324 BFD-like [2Fe-2S] binding domain 422 469 9.7E-12 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain AMIS_38500 cebed02b8ce33a8807c9003d85ef24d6 818 PRINTS PR00397 Sirohaem Fe-binding site signature 633 651 5.0E-8 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMIS_38500 cebed02b8ce33a8807c9003d85ef24d6 818 PRINTS PR00397 Sirohaem Fe-binding site signature 676 694 5.0E-8 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMIS_38500 cebed02b8ce33a8807c9003d85ef24d6 818 PIRSF PIRSF037149 1 817 0.0 T 14-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 AMIS_38500 cebed02b8ce33a8807c9003d85ef24d6 818 Gene3D G3DSA:3.50.50.60 6 302 8.1E-84 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_38500 cebed02b8ce33a8807c9003d85ef24d6 818 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 5 794 1.0E-250 T 14-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 AMIS_38500 cebed02b8ce33a8807c9003d85ef24d6 818 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 151 176 9.7E-11 T 14-10-2018 AMIS_38500 cebed02b8ce33a8807c9003d85ef24d6 818 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 278 285 9.7E-11 T 14-10-2018 AMIS_38500 cebed02b8ce33a8807c9003d85ef24d6 818 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 238 252 9.7E-11 T 14-10-2018 AMIS_38500 cebed02b8ce33a8807c9003d85ef24d6 818 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 9.7E-11 T 14-10-2018 AMIS_38500 cebed02b8ce33a8807c9003d85ef24d6 818 SUPERFAMILY SSF51905 2 197 2.09E-38 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_34140 368261c00b06d6783c7e0013f5538c88 405 Gene3D G3DSA:3.90.1150.10 23 399 3.9E-97 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMIS_34140 368261c00b06d6783c7e0013f5538c88 405 SUPERFAMILY SSF53383 24 404 5.39E-81 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_34140 368261c00b06d6783c7e0013f5538c88 405 Gene3D G3DSA:3.40.640.10 43 291 3.9E-97 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_34140 368261c00b06d6783c7e0013f5538c88 405 Pfam PF00266 Aminotransferase class-V 27 398 6.0E-74 T 14-10-2018 IPR000192 Aminotransferase class V domain AMIS_69710 9b3aad47c944fe8307a6eb826c7ea760 285 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 202 220 - T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AMIS_69710 9b3aad47c944fe8307a6eb826c7ea760 285 PRINTS PR00599 Methionine aminopeptidase-1 signature 126 142 2.0E-21 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AMIS_69710 9b3aad47c944fe8307a6eb826c7ea760 285 PRINTS PR00599 Methionine aminopeptidase-1 signature 104 117 2.0E-21 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AMIS_69710 9b3aad47c944fe8307a6eb826c7ea760 285 PRINTS PR00599 Methionine aminopeptidase-1 signature 196 208 2.0E-21 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AMIS_69710 9b3aad47c944fe8307a6eb826c7ea760 285 PRINTS PR00599 Methionine aminopeptidase-1 signature 227 239 2.0E-21 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AMIS_69710 9b3aad47c944fe8307a6eb826c7ea760 285 SUPERFAMILY SSF55920 6 284 6.28E-91 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like AMIS_69710 9b3aad47c944fe8307a6eb826c7ea760 285 Pfam PF00557 Metallopeptidase family M24 48 276 4.9E-54 T 14-10-2018 IPR000994 Peptidase M24 AMIS_69710 9b3aad47c944fe8307a6eb826c7ea760 285 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 41 283 6.6E-94 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AMIS_69710 9b3aad47c944fe8307a6eb826c7ea760 285 Gene3D G3DSA:3.90.230.10 3 285 2.0E-120 T 14-10-2018 AMIS_69710 9b3aad47c944fe8307a6eb826c7ea760 285 Hamap MF_01974 Methionine aminopeptidase [map]. 39 285 41.087 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AMIS_28400 b03722304919bea2059e21943f37a269 165 Gene3D G3DSA:1.20.1290.10 40 149 3.5E-23 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AMIS_28400 b03722304919bea2059e21943f37a269 165 SUPERFAMILY SSF69118 7 147 7.2E-33 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AMIS_28400 b03722304919bea2059e21943f37a269 165 Pfam PF02627 Carboxymuconolactone decarboxylase family 26 76 2.4E-8 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AMIS_28400 b03722304919bea2059e21943f37a269 165 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 39 74 1.9E-8 T 14-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AMIS_61280 d0b5cd03c31b864f9bd51598ef8a44de 274 SUPERFAMILY SSF56281 7 243 2.44E-19 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMIS_61280 d0b5cd03c31b864f9bd51598ef8a44de 274 Gene3D G3DSA:3.60.15.10 3 260 2.1E-54 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMIS_61280 d0b5cd03c31b864f9bd51598ef8a44de 274 Pfam PF12706 Beta-lactamase superfamily domain 24 225 3.5E-14 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMIS_54870 a0963a1ba7bbcc96aa4f4fa4a1f7c119 466 SUPERFAMILY SSF51338 360 460 3.81E-34 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMIS_54870 a0963a1ba7bbcc96aa4f4fa4a1f7c119 466 Gene3D G3DSA:3.20.20.140 54 428 2.2E-170 T 14-10-2018 AMIS_54870 a0963a1ba7bbcc96aa4f4fa4a1f7c119 466 TIGRFAM TIGR02033 D-hydantoinase: dihydropyrimidinase 3 459 1.1E-168 T 14-10-2018 IPR011778 Hydantoinase/dihydropyrimidinase GO:0005737 Reactome: R-HSA-399956 AMIS_54870 a0963a1ba7bbcc96aa4f4fa4a1f7c119 466 Gene3D G3DSA:2.30.40.10 4 459 2.2E-170 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMIS_54870 a0963a1ba7bbcc96aa4f4fa4a1f7c119 466 SUPERFAMILY SSF51338 1 65 1.94E-12 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMIS_54870 a0963a1ba7bbcc96aa4f4fa4a1f7c119 466 SUPERFAMILY SSF51556 54 387 5.83E-100 T 14-10-2018 IPR032466 Metal-dependent hydrolase AMIS_54870 a0963a1ba7bbcc96aa4f4fa4a1f7c119 466 Pfam PF01979 Amidohydrolase family 50 440 1.3E-24 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AMIS_29730 db50c6c2ce19e8c13d62217c01177b98 381 SUPERFAMILY SSF53067 80 375 5.44E-47 T 14-10-2018 AMIS_29730 db50c6c2ce19e8c13d62217c01177b98 381 SUPERFAMILY SSF46785 10 63 1.29E-9 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_29730 db50c6c2ce19e8c13d62217c01177b98 381 Gene3D G3DSA:3.30.420.40 84 364 7.9E-78 T 14-10-2018 AMIS_29730 db50c6c2ce19e8c13d62217c01177b98 381 ProSitePatterns PS01125 ROK family signature. 212 239 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AMIS_29730 db50c6c2ce19e8c13d62217c01177b98 381 Pfam PF00480 ROK family 82 360 2.3E-49 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AMIS_29730 db50c6c2ce19e8c13d62217c01177b98 381 Gene3D G3DSA:1.10.10.10 10 73 1.4E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_29730 db50c6c2ce19e8c13d62217c01177b98 381 Gene3D G3DSA:3.30.420.40 202 363 7.9E-78 T 14-10-2018 AMIS_80420 76616de00d7d3a7f12e69394e43e92c4 401 Gene3D G3DSA:3.75.10.10 3 392 3.3E-139 T 14-10-2018 AMIS_80420 76616de00d7d3a7f12e69394e43e92c4 401 Pfam PF02274 Amidinotransferase 15 392 1.1E-92 T 14-10-2018 AMIS_80420 76616de00d7d3a7f12e69394e43e92c4 401 Gene3D G3DSA:1.10.3930.10 65 145 3.3E-139 T 14-10-2018 AMIS_80420 76616de00d7d3a7f12e69394e43e92c4 401 SUPERFAMILY SSF55909 2 395 2.94E-116 T 14-10-2018 AMIS_80420 76616de00d7d3a7f12e69394e43e92c4 401 Hamap MF_00242 Arginine deiminase [arcA]. 1 395 40.474 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AMIS_80420 76616de00d7d3a7f12e69394e43e92c4 401 PIRSF PIRSF006356 1 395 2.1E-135 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AMIS_80420 76616de00d7d3a7f12e69394e43e92c4 401 PRINTS PR01466 Bacterial arginine deiminase signature 331 348 3.6E-37 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AMIS_80420 76616de00d7d3a7f12e69394e43e92c4 401 PRINTS PR01466 Bacterial arginine deiminase signature 374 392 3.6E-37 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AMIS_80420 76616de00d7d3a7f12e69394e43e92c4 401 PRINTS PR01466 Bacterial arginine deiminase signature 351 365 3.6E-37 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AMIS_80420 76616de00d7d3a7f12e69394e43e92c4 401 PRINTS PR01466 Bacterial arginine deiminase signature 174 189 3.6E-37 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AMIS_80420 76616de00d7d3a7f12e69394e43e92c4 401 PRINTS PR01466 Bacterial arginine deiminase signature 146 164 3.6E-37 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AMIS_30490 62503776b006d3e4eb702f1bcc28db9b 337 Gene3D G3DSA:3.40.190.170 45 333 2.9E-69 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily AMIS_30490 62503776b006d3e4eb702f1bcc28db9b 337 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 45 321 5.1E-56 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 AMIS_69240 5b214f4f9162c43122e1dbbe3acb7b93 123 Pfam PF13560 Helix-turn-helix domain 8 66 5.7E-11 T 14-10-2018 AMIS_69240 5b214f4f9162c43122e1dbbe3acb7b93 123 Gene3D G3DSA:1.10.260.40 3 89 2.1E-16 T 14-10-2018 AMIS_69240 5b214f4f9162c43122e1dbbe3acb7b93 123 SMART SM00530 11 66 2.2E-9 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMIS_69240 5b214f4f9162c43122e1dbbe3acb7b93 123 SUPERFAMILY SSF47413 3 71 1.41E-13 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_44980 1cae16b9aaa82c86d293eafafb7844d5 287 SUPERFAMILY SSF55874 189 266 7.6E-9 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_44980 1cae16b9aaa82c86d293eafafb7844d5 287 Gene3D G3DSA:3.30.565.10 156 285 5.1E-21 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_44980 1cae16b9aaa82c86d293eafafb7844d5 287 SUPERFAMILY SSF52091 43 148 8.63E-7 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_44980 1cae16b9aaa82c86d293eafafb7844d5 287 Gene3D G3DSA:3.30.750.24 35 153 1.0E-7 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_44980 1cae16b9aaa82c86d293eafafb7844d5 287 Pfam PF13581 Histidine kinase-like ATPase domain 172 278 5.2E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_1500 876931bc5fc9ee23cb4de1779975421f 449 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 336 441 6.2E-27 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AMIS_1500 876931bc5fc9ee23cb4de1779975421f 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 397 412 2.7E-43 T 14-10-2018 AMIS_1500 876931bc5fc9ee23cb4de1779975421f 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 419 439 2.7E-43 T 14-10-2018 AMIS_1500 876931bc5fc9ee23cb4de1779975421f 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 2.7E-43 T 14-10-2018 AMIS_1500 876931bc5fc9ee23cb4de1779975421f 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 174 199 2.7E-43 T 14-10-2018 AMIS_1500 876931bc5fc9ee23cb4de1779975421f 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 295 302 2.7E-43 T 14-10-2018 AMIS_1500 876931bc5fc9ee23cb4de1779975421f 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 138 147 2.7E-43 T 14-10-2018 AMIS_1500 876931bc5fc9ee23cb4de1779975421f 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 40 55 2.7E-43 T 14-10-2018 AMIS_1500 876931bc5fc9ee23cb4de1779975421f 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 331 352 2.7E-43 T 14-10-2018 AMIS_1500 876931bc5fc9ee23cb4de1779975421f 449 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 314 1.4E-42 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMIS_1500 876931bc5fc9ee23cb4de1779975421f 449 SUPERFAMILY SSF51905 7 368 8.39E-36 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_1500 876931bc5fc9ee23cb4de1779975421f 449 Gene3D G3DSA:3.30.390.30 333 449 2.8E-31 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AMIS_1500 876931bc5fc9ee23cb4de1779975421f 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 258 274 2.3E-15 T 14-10-2018 AMIS_1500 876931bc5fc9ee23cb4de1779975421f 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 174 192 2.3E-15 T 14-10-2018 AMIS_1500 876931bc5fc9ee23cb4de1779975421f 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 135 153 2.3E-15 T 14-10-2018 AMIS_1500 876931bc5fc9ee23cb4de1779975421f 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 2.3E-15 T 14-10-2018 AMIS_1500 876931bc5fc9ee23cb4de1779975421f 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 280 302 2.3E-15 T 14-10-2018 AMIS_1500 876931bc5fc9ee23cb4de1779975421f 449 Gene3D G3DSA:3.50.50.60 147 265 2.1E-76 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_1500 876931bc5fc9ee23cb4de1779975421f 449 Gene3D G3DSA:3.50.50.60 8 320 2.1E-76 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_1500 876931bc5fc9ee23cb4de1779975421f 449 PIRSF PIRSF000350 1 449 1.8E-66 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 AMIS_1500 876931bc5fc9ee23cb4de1779975421f 449 SUPERFAMILY SSF55424 331 447 3.78E-31 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AMIS_51790 39b56ed0776ae0235293e40d5c2d98b1 269 PRINTS PR00111 Alpha/beta hydrolase fold signature 89 102 4.4E-12 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_51790 39b56ed0776ae0235293e40d5c2d98b1 269 PRINTS PR00111 Alpha/beta hydrolase fold signature 103 116 4.4E-12 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_51790 39b56ed0776ae0235293e40d5c2d98b1 269 PRINTS PR00111 Alpha/beta hydrolase fold signature 45 60 4.4E-12 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_51790 39b56ed0776ae0235293e40d5c2d98b1 269 Pfam PF00561 alpha/beta hydrolase fold 21 135 5.1E-18 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_51790 39b56ed0776ae0235293e40d5c2d98b1 269 Gene3D G3DSA:3.40.50.1820 1 259 5.9E-45 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_51790 39b56ed0776ae0235293e40d5c2d98b1 269 SUPERFAMILY SSF53474 2 247 1.91E-48 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_62470 7616eb089e0318800138cab49416fce8 491 SUPERFAMILY SSF55545 1 100 9.12E-11 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 AMIS_62470 7616eb089e0318800138cab49416fce8 491 SUPERFAMILY SSF51445 101 450 2.32E-101 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_62470 7616eb089e0318800138cab49416fce8 491 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 101 420 8.7E-91 T 14-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 AMIS_62470 7616eb089e0318800138cab49416fce8 491 PRINTS PR00738 Glycosyl hydrolase family 20 signature 195 212 1.7E-18 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AMIS_62470 7616eb089e0318800138cab49416fce8 491 PRINTS PR00738 Glycosyl hydrolase family 20 signature 403 420 1.7E-18 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AMIS_62470 7616eb089e0318800138cab49416fce8 491 PRINTS PR00738 Glycosyl hydrolase family 20 signature 263 276 1.7E-18 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AMIS_62470 7616eb089e0318800138cab49416fce8 491 PRINTS PR00738 Glycosyl hydrolase family 20 signature 44 64 1.7E-18 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AMIS_62470 7616eb089e0318800138cab49416fce8 491 PRINTS PR00738 Glycosyl hydrolase family 20 signature 385 401 1.7E-18 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AMIS_62470 7616eb089e0318800138cab49416fce8 491 Gene3D G3DSA:3.30.379.10 7 75 2.0E-6 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 AMIS_62470 7616eb089e0318800138cab49416fce8 491 Gene3D G3DSA:3.20.20.80 84 451 3.7E-119 T 14-10-2018 AMIS_62470 7616eb089e0318800138cab49416fce8 491 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 22 97 8.2E-8 T 14-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal AMIS_53750 661ecf7ca2c3e101af01863f2c2b4457 844 Pfam PF12704 MacB-like periplasmic core domain 17 237 8.3E-13 T 14-10-2018 IPR025857 MacB-like periplasmic core domain AMIS_53750 661ecf7ca2c3e101af01863f2c2b4457 844 Pfam PF12704 MacB-like periplasmic core domain 492 687 5.6E-9 T 14-10-2018 IPR025857 MacB-like periplasmic core domain AMIS_53750 661ecf7ca2c3e101af01863f2c2b4457 844 Pfam PF02687 FtsX-like permease family 746 836 2.7E-11 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AMIS_53750 661ecf7ca2c3e101af01863f2c2b4457 844 Pfam PF02687 FtsX-like permease family 299 394 1.5E-14 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AMIS_59440 286a72235b3ae0869bfaae936b6f97e1 262 Pfam PF08241 Methyltransferase domain 43 130 1.1E-8 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 AMIS_59440 286a72235b3ae0869bfaae936b6f97e1 262 SUPERFAMILY SSF53335 8 133 7.82E-22 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_59440 286a72235b3ae0869bfaae936b6f97e1 262 Gene3D G3DSA:3.40.50.150 9 251 1.9E-31 T 14-10-2018 AMIS_64010 bb9bdb5b706c5f13f775765f6de2588d 115 SUPERFAMILY SSF54909 1 110 2.2E-19 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel AMIS_64010 bb9bdb5b706c5f13f775765f6de2588d 115 Gene3D G3DSA:3.30.70.1060 1 114 5.2E-27 T 14-10-2018 AMIS_64010 bb9bdb5b706c5f13f775765f6de2588d 115 Pfam PF03795 YCII-related domain 1 110 6.6E-13 T 14-10-2018 IPR005545 YCII-related AMIS_66280 97918885f857fd8577d4d49916b2cbaa 222 SUPERFAMILY SSF52172 2 135 2.99E-35 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_66280 97918885f857fd8577d4d49916b2cbaa 222 Gene3D G3DSA:3.40.50.12740 3 222 1.6E-70 T 14-10-2018 AMIS_66280 97918885f857fd8577d4d49916b2cbaa 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 192 2.4E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_66280 97918885f857fd8577d4d49916b2cbaa 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 192 204 2.4E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_66280 97918885f857fd8577d4d49916b2cbaa 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 176 2.4E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_66280 97918885f857fd8577d4d49916b2cbaa 222 Pfam PF00072 Response regulator receiver domain 5 117 3.5E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_66280 97918885f857fd8577d4d49916b2cbaa 222 SMART SM00421 159 216 3.0E-23 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_66280 97918885f857fd8577d4d49916b2cbaa 222 Pfam PF00196 Bacterial regulatory proteins, luxR family 161 216 1.2E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_66280 97918885f857fd8577d4d49916b2cbaa 222 SMART SM00448 3 116 2.7E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_66280 97918885f857fd8577d4d49916b2cbaa 222 SUPERFAMILY SSF46894 157 222 3.27E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_81160 217d3b1fe16c0ba58fb388b5c4185470 323 Gene3D G3DSA:3.30.1490.20 119 192 1.6E-58 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AMIS_81160 217d3b1fe16c0ba58fb388b5c4185470 323 Gene3D G3DSA:3.40.50.20 1 92 3.0E-24 T 14-10-2018 AMIS_81160 217d3b1fe16c0ba58fb388b5c4185470 323 Pfam PF07478 D-ala D-ala ligase C-terminus 112 315 2.7E-48 T 14-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMIS_81160 217d3b1fe16c0ba58fb388b5c4185470 323 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 11 319 29.847 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMIS_81160 217d3b1fe16c0ba58fb388b5c4185470 323 SUPERFAMILY SSF56059 104 312 4.95E-48 T 14-10-2018 AMIS_81160 217d3b1fe16c0ba58fb388b5c4185470 323 Gene3D G3DSA:3.30.470.20 93 313 1.6E-58 T 14-10-2018 AMIS_81160 217d3b1fe16c0ba58fb388b5c4185470 323 Pfam PF01820 D-ala D-ala ligase N-terminus 12 93 5.1E-15 T 14-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMIS_81160 217d3b1fe16c0ba58fb388b5c4185470 323 SUPERFAMILY SSF52440 11 104 1.53E-23 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AMIS_81160 217d3b1fe16c0ba58fb388b5c4185470 323 PIRSF PIRSF039102 8 55 2.2E-6 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMIS_81160 217d3b1fe16c0ba58fb388b5c4185470 323 PIRSF PIRSF039102 46 323 1.0E-70 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMIS_71210 6f2263cca2f24e29c22badc46e0b5c88 172 SUPERFAMILY SSF55021 82 163 2.36E-26 T 14-10-2018 AMIS_71210 6f2263cca2f24e29c22badc46e0b5c88 172 Pfam PF13710 ACT domain 14 75 1.5E-17 T 14-10-2018 AMIS_71210 6f2263cca2f24e29c22badc46e0b5c88 172 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 4 78 4.0E-30 T 14-10-2018 AMIS_71210 6f2263cca2f24e29c22badc46e0b5c88 172 SUPERFAMILY SSF55021 4 77 7.24E-23 T 14-10-2018 AMIS_71210 6f2263cca2f24e29c22badc46e0b5c88 172 Gene3D G3DSA:3.30.70.1150 85 164 2.6E-30 T 14-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal AMIS_71210 6f2263cca2f24e29c22badc46e0b5c88 172 Gene3D G3DSA:3.30.70.260 2 80 6.5E-37 T 14-10-2018 AMIS_71210 6f2263cca2f24e29c22badc46e0b5c88 172 Pfam PF10369 Small subunit of acetolactate synthase 86 159 7.6E-29 T 14-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AMIS_71210 6f2263cca2f24e29c22badc46e0b5c88 172 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 4 159 4.2E-63 T 14-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AMIS_9090 3dcc5a52fcc51846f8932af41e3b3c81 105 Pfam PF13466 STAS domain 18 97 1.5E-15 T 14-10-2018 IPR002645 STAS domain AMIS_9090 3dcc5a52fcc51846f8932af41e3b3c81 105 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 10 104 5.4E-21 T 14-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 AMIS_9090 3dcc5a52fcc51846f8932af41e3b3c81 105 Gene3D G3DSA:3.30.750.24 7 105 1.2E-25 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_9090 3dcc5a52fcc51846f8932af41e3b3c81 105 SUPERFAMILY SSF52091 9 103 7.85E-23 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_79200 9e599c853fd05d5558eee8bf9cc291f7 341 Pfam PF06030 Bacterial protein of unknown function (DUF916) 70 159 7.8E-9 T 14-10-2018 IPR010317 Protein of unknown function DUF916, cell surface putative AMIS_30390 22ad25e44b34d63fcff38bd7973396f0 272 SUPERFAMILY SSF51735 4 265 2.02E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_30390 22ad25e44b34d63fcff38bd7973396f0 272 Pfam PF00106 short chain dehydrogenase 5 133 2.2E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_30390 22ad25e44b34d63fcff38bd7973396f0 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 189 206 3.5E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_30390 22ad25e44b34d63fcff38bd7973396f0 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 226 246 3.5E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_30390 22ad25e44b34d63fcff38bd7973396f0 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 3.5E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_30390 22ad25e44b34d63fcff38bd7973396f0 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 114 130 3.5E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_30390 22ad25e44b34d63fcff38bd7973396f0 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.5E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_30390 22ad25e44b34d63fcff38bd7973396f0 272 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 166 261 1.5E-17 T 14-10-2018 AMIS_30390 22ad25e44b34d63fcff38bd7973396f0 272 Gene3D G3DSA:3.40.50.720 1 270 1.8E-37 T 14-10-2018 AMIS_78980 993ffd3abc3c13fa5477f716414a2079 364 Pfam PF13570 PQQ-like domain 298 332 0.0014 T 14-10-2018 IPR025666 Pyrrolo-quinoline quinone-like domain AMIS_78980 993ffd3abc3c13fa5477f716414a2079 364 Pfam PF13360 PQQ-like domain 79 230 1.8E-11 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat AMIS_78980 993ffd3abc3c13fa5477f716414a2079 364 SUPERFAMILY SSF50998 7 353 5.36E-35 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AMIS_78980 993ffd3abc3c13fa5477f716414a2079 364 Gene3D G3DSA:2.130.10.10 24 364 4.7E-34 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_78980 993ffd3abc3c13fa5477f716414a2079 364 SMART SM00564 273 305 38.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMIS_78980 993ffd3abc3c13fa5477f716414a2079 364 SMART SM00564 105 145 0.46 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMIS_78980 993ffd3abc3c13fa5477f716414a2079 364 SMART SM00564 152 188 840.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMIS_78980 993ffd3abc3c13fa5477f716414a2079 364 SMART SM00564 237 268 5.2 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMIS_78980 993ffd3abc3c13fa5477f716414a2079 364 SMART SM00564 64 94 19.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMIS_4000 e72f5ffa96a9cb05f0d30e56c69a57f7 247 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 107 216 1.0E-12 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMIS_4000 e72f5ffa96a9cb05f0d30e56c69a57f7 247 SUPERFAMILY SSF56784 9 244 2.36E-37 T 14-10-2018 IPR036412 HAD-like superfamily AMIS_4000 e72f5ffa96a9cb05f0d30e56c69a57f7 247 Gene3D G3DSA:3.40.50.1000 12 243 2.4E-52 T 14-10-2018 IPR023214 HAD superfamily AMIS_4000 e72f5ffa96a9cb05f0d30e56c69a57f7 247 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 10 216 2.0E-49 T 14-10-2018 IPR010976 Beta-phosphoglucomutase hydrolase AMIS_4000 e72f5ffa96a9cb05f0d30e56c69a57f7 247 Gene3D G3DSA:1.10.150.240 20 116 2.4E-52 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AMIS_4000 e72f5ffa96a9cb05f0d30e56c69a57f7 247 Pfam PF00702 haloacid dehalogenase-like hydrolase 8 212 2.1E-14 T 14-10-2018 AMIS_1600 a2c688d3741d341306c368c7b4d83a89 490 SUPERFAMILY SSF102588 20 270 1.7E-13 T 14-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 AMIS_1600 a2c688d3741d341306c368c7b4d83a89 490 Pfam PF02585 GlcNAc-PI de-N-acetylase 23 233 9.9E-16 T 14-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 AMIS_63230 24ddbce581ec6593cfe6573c8099a363 460 Pfam PF07732 Multicopper oxidase 206 315 3.3E-14 T 14-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 AMIS_63230 24ddbce581ec6593cfe6573c8099a363 460 SUPERFAMILY SSF49503 58 143 1.12E-12 T 14-10-2018 IPR008972 Cupredoxin AMIS_63230 24ddbce581ec6593cfe6573c8099a363 460 SUPERFAMILY SSF49503 315 459 1.48E-38 T 14-10-2018 IPR008972 Cupredoxin AMIS_63230 24ddbce581ec6593cfe6573c8099a363 460 Gene3D G3DSA:2.60.40.420 46 146 4.0E-12 T 14-10-2018 IPR008972 Cupredoxin AMIS_63230 24ddbce581ec6593cfe6573c8099a363 460 SUPERFAMILY SSF49503 193 331 8.8E-35 T 14-10-2018 IPR008972 Cupredoxin AMIS_63230 24ddbce581ec6593cfe6573c8099a363 460 PRINTS PR00695 Copper containing nitrite reductase signature 280 295 6.9E-9 T 14-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 AMIS_63230 24ddbce581ec6593cfe6573c8099a363 460 PRINTS PR00695 Copper containing nitrite reductase signature 297 313 6.9E-9 T 14-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 AMIS_63230 24ddbce581ec6593cfe6573c8099a363 460 PRINTS PR00695 Copper containing nitrite reductase signature 223 239 6.9E-9 T 14-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 AMIS_63230 24ddbce581ec6593cfe6573c8099a363 460 Gene3D G3DSA:2.60.40.420 315 460 2.1E-52 T 14-10-2018 IPR008972 Cupredoxin AMIS_63230 24ddbce581ec6593cfe6573c8099a363 460 Gene3D G3DSA:2.60.40.420 176 314 1.6E-36 T 14-10-2018 IPR008972 Cupredoxin AMIS_25770 a4fc904f1e6c0f59b7df67c1cebd11f4 458 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 322 1.2E-46 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMIS_25770 a4fc904f1e6c0f59b7df67c1cebd11f4 458 SUPERFAMILY SSF55424 345 454 2.06E-21 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AMIS_25770 a4fc904f1e6c0f59b7df67c1cebd11f4 458 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 175 193 3.4E-20 T 14-10-2018 AMIS_25770 a4fc904f1e6c0f59b7df67c1cebd11f4 458 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 135 153 3.4E-20 T 14-10-2018 AMIS_25770 a4fc904f1e6c0f59b7df67c1cebd11f4 458 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 275 3.4E-20 T 14-10-2018 AMIS_25770 a4fc904f1e6c0f59b7df67c1cebd11f4 458 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 3.4E-20 T 14-10-2018 AMIS_25770 a4fc904f1e6c0f59b7df67c1cebd11f4 458 SUPERFAMILY SSF51905 1 331 2.19E-49 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_25770 a4fc904f1e6c0f59b7df67c1cebd11f4 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 260 274 1.1E-45 T 14-10-2018 AMIS_25770 a4fc904f1e6c0f59b7df67c1cebd11f4 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 175 200 1.1E-45 T 14-10-2018 AMIS_25770 a4fc904f1e6c0f59b7df67c1cebd11f4 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 302 309 1.1E-45 T 14-10-2018 AMIS_25770 a4fc904f1e6c0f59b7df67c1cebd11f4 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 139 148 1.1E-45 T 14-10-2018 AMIS_25770 a4fc904f1e6c0f59b7df67c1cebd11f4 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 406 421 1.1E-45 T 14-10-2018 AMIS_25770 a4fc904f1e6c0f59b7df67c1cebd11f4 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 1.1E-45 T 14-10-2018 AMIS_25770 a4fc904f1e6c0f59b7df67c1cebd11f4 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 37 52 1.1E-45 T 14-10-2018 AMIS_25770 a4fc904f1e6c0f59b7df67c1cebd11f4 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 341 362 1.1E-45 T 14-10-2018 AMIS_25770 a4fc904f1e6c0f59b7df67c1cebd11f4 458 Gene3D G3DSA:3.30.390.30 345 458 1.2E-23 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AMIS_25770 a4fc904f1e6c0f59b7df67c1cebd11f4 458 Gene3D G3DSA:3.50.50.60 155 273 2.1E-86 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_25770 a4fc904f1e6c0f59b7df67c1cebd11f4 458 PIRSF PIRSF000350 1 449 9.6E-71 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 AMIS_25770 a4fc904f1e6c0f59b7df67c1cebd11f4 458 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 450 8.1E-17 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AMIS_25770 a4fc904f1e6c0f59b7df67c1cebd11f4 458 Gene3D G3DSA:3.50.50.60 4 327 2.1E-86 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_62260 8d1551b686ee2255dcac9e344258c9b0 165 Pfam PF01202 Shikimate kinase 11 162 2.5E-42 T 14-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AMIS_62260 8d1551b686ee2255dcac9e344258c9b0 165 Gene3D G3DSA:3.40.50.300 2 165 1.7E-50 T 14-10-2018 AMIS_62260 8d1551b686ee2255dcac9e344258c9b0 165 SUPERFAMILY SSF52540 3 164 1.75E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_62260 8d1551b686ee2255dcac9e344258c9b0 165 Hamap MF_00109 Shikimate kinase [aroK]. 2 165 26.539 T 14-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AMIS_62260 8d1551b686ee2255dcac9e344258c9b0 165 ProSitePatterns PS01128 Shikimate kinase signature. 58 83 - T 14-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AMIS_62260 8d1551b686ee2255dcac9e344258c9b0 165 PRINTS PR01100 Shikimate kinase family signature 57 65 2.2E-20 T 14-10-2018 AMIS_62260 8d1551b686ee2255dcac9e344258c9b0 165 PRINTS PR01100 Shikimate kinase family signature 5 20 2.2E-20 T 14-10-2018 AMIS_62260 8d1551b686ee2255dcac9e344258c9b0 165 PRINTS PR01100 Shikimate kinase family signature 75 84 2.2E-20 T 14-10-2018 AMIS_62260 8d1551b686ee2255dcac9e344258c9b0 165 PRINTS PR01100 Shikimate kinase family signature 29 42 2.2E-20 T 14-10-2018 AMIS_62260 8d1551b686ee2255dcac9e344258c9b0 165 PRINTS PR01100 Shikimate kinase family signature 95 112 2.2E-20 T 14-10-2018 AMIS_16670 42ad6cd762c3e743eb58cf5c10164f59 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 205 4.9E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_16670 42ad6cd762c3e743eb58cf5c10164f59 215 SMART SM00421 148 205 6.8E-25 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_16670 42ad6cd762c3e743eb58cf5c10164f59 215 Gene3D G3DSA:3.40.50.12740 2 211 2.2E-70 T 14-10-2018 AMIS_16670 42ad6cd762c3e743eb58cf5c10164f59 215 SMART SM00448 2 112 8.2E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_16670 42ad6cd762c3e743eb58cf5c10164f59 215 Pfam PF00072 Response regulator receiver domain 4 113 5.0E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_16670 42ad6cd762c3e743eb58cf5c10164f59 215 SUPERFAMILY SSF52172 1 130 4.27E-32 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_16670 42ad6cd762c3e743eb58cf5c10164f59 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 5.8E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_16670 42ad6cd762c3e743eb58cf5c10164f59 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 5.8E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_16670 42ad6cd762c3e743eb58cf5c10164f59 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 5.8E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_16670 42ad6cd762c3e743eb58cf5c10164f59 215 SUPERFAMILY SSF46894 135 211 4.08E-22 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_77800 02d086b108fa8be9a6315e4bef31b68c 377 SUPERFAMILY SSF56762 26 376 4.45E-103 T 14-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_77800 02d086b108fa8be9a6315e4bef31b68c 377 Gene3D G3DSA:1.10.645.20 17 377 4.1E-138 T 14-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_77800 02d086b108fa8be9a6315e4bef31b68c 377 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 131 303 1.2E-51 T 14-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_77800 02d086b108fa8be9a6315e4bef31b68c 377 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 303 377 2.0E-19 T 14-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_77800 02d086b108fa8be9a6315e4bef31b68c 377 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 1 377 41.44 T 14-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_77800 02d086b108fa8be9a6315e4bef31b68c 377 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 53 64 - T 14-10-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_22460 cf06d1696af1dfdb475138c1fd5fb986 370 Gene3D G3DSA:3.30.9.30 38 262 4.6E-61 T 14-10-2018 AMIS_22460 cf06d1696af1dfdb475138c1fd5fb986 370 Gene3D G3DSA:3.50.50.60 6 330 4.6E-61 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_22460 cf06d1696af1dfdb475138c1fd5fb986 370 SUPERFAMILY SSF51905 4 350 4.58E-45 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_22460 cf06d1696af1dfdb475138c1fd5fb986 370 Pfam PF01494 FAD binding domain 4 325 8.4E-15 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 AMIS_22460 cf06d1696af1dfdb475138c1fd5fb986 370 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 1.4E-19 T 14-10-2018 AMIS_22460 cf06d1696af1dfdb475138c1fd5fb986 370 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 284 300 1.4E-19 T 14-10-2018 AMIS_22460 cf06d1696af1dfdb475138c1fd5fb986 370 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 144 159 1.4E-19 T 14-10-2018 AMIS_22460 cf06d1696af1dfdb475138c1fd5fb986 370 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 269 284 1.4E-19 T 14-10-2018 AMIS_5520 e7e84bc34c422a81a47236e86430cbfe 309 SUPERFAMILY SSF51735 6 297 3.16E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_5520 e7e84bc34c422a81a47236e86430cbfe 309 Gene3D G3DSA:3.40.50.720 5 307 2.3E-27 T 14-10-2018 AMIS_5520 e7e84bc34c422a81a47236e86430cbfe 309 Pfam PF01370 NAD dependent epimerase/dehydratase family 8 206 8.8E-6 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AMIS_51950 7d7f62ec9063c66092c37152b52e6f5d 538 SUPERFAMILY SSF52540 7 234 3.23E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_51950 7d7f62ec9063c66092c37152b52e6f5d 538 Gene3D G3DSA:3.40.50.300 2 263 2.0E-45 T 14-10-2018 AMIS_51950 7d7f62ec9063c66092c37152b52e6f5d 538 Gene3D G3DSA:3.40.50.300 307 538 3.6E-38 T 14-10-2018 AMIS_51950 7d7f62ec9063c66092c37152b52e6f5d 538 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_51950 7d7f62ec9063c66092c37152b52e6f5d 538 SUPERFAMILY SSF52540 359 537 1.07E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_51950 7d7f62ec9063c66092c37152b52e6f5d 538 Pfam PF00005 ABC transporter 361 489 7.6E-15 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_51950 7d7f62ec9063c66092c37152b52e6f5d 538 Pfam PF00005 ABC transporter 23 181 3.0E-20 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_51950 7d7f62ec9063c66092c37152b52e6f5d 538 SMART SM00382 368 535 6.2E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_51950 7d7f62ec9063c66092c37152b52e6f5d 538 SMART SM00382 29 226 6.0E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_39920 ce25281578b9d75d45bbc9b615e30e3d 1062 Gene3D G3DSA:3.40.50.300 854 1053 9.0E-31 T 14-10-2018 AMIS_39920 ce25281578b9d75d45bbc9b615e30e3d 1062 SUPERFAMILY SSF52540 273 499 1.07E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_39920 ce25281578b9d75d45bbc9b615e30e3d 1062 Pfam PF01580 FtsK/SpoIIIE family 418 470 6.9E-6 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 AMIS_39920 ce25281578b9d75d45bbc9b615e30e3d 1062 Pfam PF01580 FtsK/SpoIIIE family 605 700 1.0E-15 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 AMIS_39920 ce25281578b9d75d45bbc9b615e30e3d 1062 Pfam PF01580 FtsK/SpoIIIE family 857 921 6.3E-6 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 AMIS_39920 ce25281578b9d75d45bbc9b615e30e3d 1062 Pfam PF01580 FtsK/SpoIIIE family 705 790 4.2E-7 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 AMIS_39920 ce25281578b9d75d45bbc9b615e30e3d 1062 Pfam PF01580 FtsK/SpoIIIE family 283 404 3.7E-20 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 AMIS_39920 ce25281578b9d75d45bbc9b615e30e3d 1062 Gene3D G3DSA:3.40.50.300 558 843 2.2E-49 T 14-10-2018 AMIS_39920 ce25281578b9d75d45bbc9b615e30e3d 1062 SUPERFAMILY SSF52540 594 756 5.23E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_39920 ce25281578b9d75d45bbc9b615e30e3d 1062 Gene3D G3DSA:3.40.50.300 255 557 7.7E-87 T 14-10-2018 AMIS_39920 ce25281578b9d75d45bbc9b615e30e3d 1062 SMART SM00382 877 1017 0.01 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_39920 ce25281578b9d75d45bbc9b615e30e3d 1062 SMART SM00382 312 493 7.5 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_39920 ce25281578b9d75d45bbc9b615e30e3d 1062 SUPERFAMILY SSF52540 836 989 8.04E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_12650 9d801c97f164d831ac960aef1a6930fd 477 Gene3D G3DSA:1.10.390.60 213 444 6.7E-39 T 14-10-2018 AMIS_12650 9d801c97f164d831ac960aef1a6930fd 477 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 319 331 7.6E-11 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMIS_12650 9d801c97f164d831ac960aef1a6930fd 477 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 143 158 7.6E-11 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMIS_12650 9d801c97f164d831ac960aef1a6930fd 477 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 192 207 7.6E-11 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMIS_12650 9d801c97f164d831ac960aef1a6930fd 477 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 300 315 7.6E-11 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMIS_12650 9d801c97f164d831ac960aef1a6930fd 477 SUPERFAMILY SSF55486 238 449 9.08E-54 T 14-10-2018 AMIS_12650 9d801c97f164d831ac960aef1a6930fd 477 Pfam PF01433 Peptidase family M1 domain 293 440 7.1E-28 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMIS_12650 9d801c97f164d831ac960aef1a6930fd 477 Gene3D G3DSA:2.60.40.1730 26 209 3.3E-25 T 14-10-2018 AMIS_12650 9d801c97f164d831ac960aef1a6930fd 477 SUPERFAMILY SSF63737 15 208 7.19E-35 T 14-10-2018 AMIS_7080 503ec35edd54eca390426b01d476e472 343 ProSitePatterns PS00211 ABC transporters family signature. 172 186 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_7080 503ec35edd54eca390426b01d476e472 343 Gene3D G3DSA:3.40.50.300 18 341 5.1E-98 T 14-10-2018 AMIS_7080 503ec35edd54eca390426b01d476e472 343 SUPERFAMILY SSF52540 20 271 1.3E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_7080 503ec35edd54eca390426b01d476e472 343 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 251 315 1.3E-19 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMIS_7080 503ec35edd54eca390426b01d476e472 343 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 249 336 1.2E-25 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMIS_7080 503ec35edd54eca390426b01d476e472 343 Pfam PF00005 ABC transporter 41 199 4.0E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_7080 503ec35edd54eca390426b01d476e472 343 SMART SM00382 49 249 1.2E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_69650 99dfe60695077ceb1e58728aea0293ed 339 Gene3D G3DSA:3.30.300.20 259 329 6.8E-29 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta AMIS_69650 99dfe60695077ceb1e58728aea0293ed 339 SMART SM00322 211 274 1.3 T 14-10-2018 IPR004087 K Homology domain GO:0003676 AMIS_69650 99dfe60695077ceb1e58728aea0293ed 339 SMART SM00322 283 339 0.51 T 14-10-2018 IPR004087 K Homology domain GO:0003676 AMIS_69650 99dfe60695077ceb1e58728aea0293ed 339 SUPERFAMILY SSF54814 260 325 5.23E-16 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 AMIS_69650 99dfe60695077ceb1e58728aea0293ed 339 Pfam PF08529 NusA N-terminal domain 59 99 4.4E-8 T 14-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 AMIS_69650 99dfe60695077ceb1e58728aea0293ed 339 Pfam PF08529 NusA N-terminal domain 6 60 8.2E-9 T 14-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 AMIS_69650 99dfe60695077ceb1e58728aea0293ed 339 SUPERFAMILY SSF54814 181 259 7.19E-28 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 AMIS_69650 99dfe60695077ceb1e58728aea0293ed 339 Gene3D G3DSA:3.30.300.20 180 258 1.6E-32 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta AMIS_69650 99dfe60695077ceb1e58728aea0293ed 339 SUPERFAMILY SSF69705 2 98 9.42E-29 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 AMIS_69650 99dfe60695077ceb1e58728aea0293ed 339 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 1 339 25.908 T 14-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 AMIS_69650 99dfe60695077ceb1e58728aea0293ed 339 Pfam PF13184 NusA-like KH domain 211 279 5.5E-26 T 14-10-2018 IPR025249 KH domain, NusA-like GO:0003723 AMIS_69650 99dfe60695077ceb1e58728aea0293ed 339 Gene3D G3DSA:3.30.1480.10 1 99 1.4E-34 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 AMIS_69650 99dfe60695077ceb1e58728aea0293ed 339 SUPERFAMILY SSF50249 110 180 9.9E-14 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMIS_69650 99dfe60695077ceb1e58728aea0293ed 339 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 323 1.4E-102 T 14-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 AMIS_69650 99dfe60695077ceb1e58728aea0293ed 339 Gene3D G3DSA:2.40.50.140 105 179 5.5E-25 T 14-10-2018 AMIS_37250 db048e4442c5d11bc9bd06e2452093f8 969 SMART SM00606 848 969 3.4E-16 T 14-10-2018 IPR006584 Cellulose binding, type IV GO:0030246 AMIS_37250 db048e4442c5d11bc9bd06e2452093f8 969 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 97 345 2.3E-36 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMIS_37250 db048e4442c5d11bc9bd06e2452093f8 969 PRINTS PR00133 Glycosyl hydrolase family 3 signature 193 209 1.5E-7 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMIS_37250 db048e4442c5d11bc9bd06e2452093f8 969 PRINTS PR00133 Glycosyl hydrolase family 3 signature 104 123 1.5E-7 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMIS_37250 db048e4442c5d11bc9bd06e2452093f8 969 Gene3D G3DSA:2.60.40.10 734 840 6.2E-35 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_37250 db048e4442c5d11bc9bd06e2452093f8 969 Gene3D G3DSA:3.20.20.300 45 733 1.0E-184 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 AMIS_37250 db048e4442c5d11bc9bd06e2452093f8 969 SUPERFAMILY SSF49785 850 969 6.63E-18 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_37250 db048e4442c5d11bc9bd06e2452093f8 969 Gene3D G3DSA:3.40.50.1700 378 698 1.0E-184 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 AMIS_37250 db048e4442c5d11bc9bd06e2452093f8 969 Gene3D G3DSA:2.60.120.380 459 589 1.0E-184 T 14-10-2018 AMIS_37250 db048e4442c5d11bc9bd06e2452093f8 969 Pfam PF14310 Fibronectin type III-like domain 760 830 5.3E-23 T 14-10-2018 IPR026891 Fibronectin type III-like domain AMIS_37250 db048e4442c5d11bc9bd06e2452093f8 969 SUPERFAMILY SSF51445 30 384 2.42E-74 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_37250 db048e4442c5d11bc9bd06e2452093f8 969 Pfam PF03422 Carbohydrate binding module (family 6) 858 956 1.8E-18 T 14-10-2018 IPR005084 Carbohydrate binding module family 6 GO:0030246 AMIS_37250 db048e4442c5d11bc9bd06e2452093f8 969 SMART SM01217 760 830 1.0E-29 T 14-10-2018 IPR026891 Fibronectin type III-like domain AMIS_37250 db048e4442c5d11bc9bd06e2452093f8 969 Gene3D G3DSA:2.60.120.260 841 969 3.9E-22 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_37250 db048e4442c5d11bc9bd06e2452093f8 969 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 386 731 8.0E-60 T 14-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 AMIS_37250 db048e4442c5d11bc9bd06e2452093f8 969 SUPERFAMILY SSF52279 386 734 4.05E-50 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 AMIS_8510 9e5e8ae63071ca98aca01b325a3b4063 372 SUPERFAMILY SSF53448 8 285 3.34E-58 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_8510 9e5e8ae63071ca98aca01b325a3b4063 372 SUPERFAMILY SSF159283 307 364 1.16E-15 T 14-10-2018 AMIS_8510 9e5e8ae63071ca98aca01b325a3b4063 372 Pfam PF01050 Mannose-6-phosphate isomerase 331 368 7.8E-7 T 14-10-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 AMIS_8510 9e5e8ae63071ca98aca01b325a3b4063 372 Pfam PF00483 Nucleotidyl transferase 10 288 6.5E-46 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AMIS_8510 9e5e8ae63071ca98aca01b325a3b4063 372 Gene3D G3DSA:3.90.550.10 7 366 1.7E-108 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_34710 89fe993b5407f0ba5881ad9a8980b026 485 SUPERFAMILY SSF51905 14 234 2.16E-51 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_34710 89fe993b5407f0ba5881ad9a8980b026 485 SUPERFAMILY SSF51905 276 450 1.05E-13 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_34710 89fe993b5407f0ba5881ad9a8980b026 485 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 8.4E-5 T 14-10-2018 AMIS_34710 89fe993b5407f0ba5881ad9a8980b026 485 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 15 34 8.4E-5 T 14-10-2018 AMIS_34710 89fe993b5407f0ba5881ad9a8980b026 485 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 16 212 8.9E-15 T 14-10-2018 AMIS_34710 89fe993b5407f0ba5881ad9a8980b026 485 Gene3D G3DSA:3.50.50.60 309 480 9.4E-31 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_34710 89fe993b5407f0ba5881ad9a8980b026 485 Gene3D G3DSA:3.50.50.60 2 174 5.4E-51 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_34710 89fe993b5407f0ba5881ad9a8980b026 485 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 174 198 3.4E-6 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMIS_34710 89fe993b5407f0ba5881ad9a8980b026 485 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 135 143 3.4E-6 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMIS_34710 89fe993b5407f0ba5881ad9a8980b026 485 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 14 36 3.4E-6 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMIS_70610 7a810821425af1d446987f08bb262d60 505 Pfam PF13692 Glycosyl transferases group 1 298 436 1.2E-13 T 14-10-2018 AMIS_70610 7a810821425af1d446987f08bb262d60 505 SUPERFAMILY SSF53756 180 470 1.88E-38 T 14-10-2018 AMIS_70610 7a810821425af1d446987f08bb262d60 505 Gene3D G3DSA:3.40.50.2000 283 451 1.1E-29 T 14-10-2018 AMIS_70610 7a810821425af1d446987f08bb262d60 505 Gene3D G3DSA:3.40.50.2000 154 468 1.1E-29 T 14-10-2018 AMIS_70610 7a810821425af1d446987f08bb262d60 505 Pfam PF11997 Domain of unknown function (DUF3492) 9 273 7.4E-15 T 14-10-2018 IPR022622 Domain of unknown function DUF3492 AMIS_13170 dfafd22fcf013430ecb15040847570f9 912 SUPERFAMILY SSF52922 721 904 1.43E-53 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AMIS_13170 dfafd22fcf013430ecb15040847570f9 912 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 148 317 3.9E-11 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AMIS_13170 dfafd22fcf013430ecb15040847570f9 912 PIRSF PIRSF000156 9 907 0.0 T 14-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 AMIS_13170 dfafd22fcf013430ecb15040847570f9 912 SUPERFAMILY SSF52518 69 484 5.05E-130 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold AMIS_13170 dfafd22fcf013430ecb15040847570f9 912 SUPERFAMILY SSF52518 490 718 1.77E-89 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold AMIS_13170 dfafd22fcf013430ecb15040847570f9 912 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 18 905 0.0 T 14-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 AMIS_13170 dfafd22fcf013430ecb15040847570f9 912 Gene3D G3DSA:3.40.50.920 725 906 1.3E-65 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AMIS_13170 dfafd22fcf013430ecb15040847570f9 912 Gene3D G3DSA:3.40.50.970 68 488 5.9E-131 T 14-10-2018 AMIS_13170 dfafd22fcf013430ecb15040847570f9 912 Gene3D G3DSA:3.40.50.970 489 723 3.8E-104 T 14-10-2018 AMIS_25590 ec99773699115b4a8f539ad9ad99a5a7 78 Pfam PF01872 RibD C-terminal domain 2 52 4.5E-5 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 AMIS_25590 ec99773699115b4a8f539ad9ad99a5a7 78 SUPERFAMILY SSF53597 1 55 1.4E-5 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AMIS_25590 ec99773699115b4a8f539ad9ad99a5a7 78 Gene3D G3DSA:3.40.430.10 1 55 4.5E-9 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AMIS_37550 c3588072f496cac0bda606f70d62a93d 547 SUPERFAMILY SSF56112 8 266 8.36E-66 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMIS_37550 c3588072f496cac0bda606f70d62a93d 547 SMART SM00220 12 265 6.8E-62 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMIS_37550 c3588072f496cac0bda606f70d62a93d 547 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 18 41 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 AMIS_37550 c3588072f496cac0bda606f70d62a93d 547 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 132 144 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 AMIS_37550 c3588072f496cac0bda606f70d62a93d 547 Gene3D G3DSA:3.30.200.20 4 92 9.8E-29 T 14-10-2018 AMIS_37550 c3588072f496cac0bda606f70d62a93d 547 Pfam PF00069 Protein kinase domain 12 259 1.1E-47 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMIS_37550 c3588072f496cac0bda606f70d62a93d 547 Gene3D G3DSA:1.10.510.10 95 273 2.4E-39 T 14-10-2018 AMIS_79670 0d1c1bc2c3544b004b19d4509a79adaa 264 SUPERFAMILY SSF47413 18 70 1.09E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_79670 0d1c1bc2c3544b004b19d4509a79adaa 264 Pfam PF13560 Helix-turn-helix domain 1 74 8.3E-17 T 14-10-2018 AMIS_79670 0d1c1bc2c3544b004b19d4509a79adaa 264 SMART SM00530 4 71 1.4E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMIS_79670 0d1c1bc2c3544b004b19d4509a79adaa 264 Gene3D G3DSA:1.10.260.40 16 73 1.1E-7 T 14-10-2018 AMIS_49420 724c01eee3e5f2cc3ad6fe27583caf03 396 Pfam PF09339 IclR helix-turn-helix domain 14 55 5.8E-5 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AMIS_49420 724c01eee3e5f2cc3ad6fe27583caf03 396 Gene3D G3DSA:3.30.420.40 88 379 3.4E-70 T 14-10-2018 AMIS_49420 724c01eee3e5f2cc3ad6fe27583caf03 396 SUPERFAMILY SSF53067 82 382 3.03E-42 T 14-10-2018 AMIS_49420 724c01eee3e5f2cc3ad6fe27583caf03 396 SUPERFAMILY SSF46785 14 69 1.93E-7 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_49420 724c01eee3e5f2cc3ad6fe27583caf03 396 Gene3D G3DSA:3.30.420.40 204 369 3.4E-70 T 14-10-2018 AMIS_49420 724c01eee3e5f2cc3ad6fe27583caf03 396 Pfam PF00480 ROK family 82 380 3.4E-46 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AMIS_49420 724c01eee3e5f2cc3ad6fe27583caf03 396 Gene3D G3DSA:1.10.10.10 3 74 1.4E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_66080 543c8e28c5608e9dcb2e1c1cff773ea2 113 Pfam PF13531 Bacterial extracellular solute-binding protein 1 65 4.4E-10 T 14-10-2018 AMIS_66080 543c8e28c5608e9dcb2e1c1cff773ea2 113 Gene3D G3DSA:3.40.190.10 1 112 3.7E-21 T 14-10-2018 AMIS_66080 543c8e28c5608e9dcb2e1c1cff773ea2 113 SUPERFAMILY SSF53850 1 79 8.78E-12 T 14-10-2018 AMIS_74070 e09e363b4d64941aa0cf694432f7b921 211 SUPERFAMILY SSF46689 4 74 2.98E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_74070 e09e363b4d64941aa0cf694432f7b921 211 SUPERFAMILY SSF48498 81 191 1.47E-19 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_74070 e09e363b4d64941aa0cf694432f7b921 211 Gene3D G3DSA:1.10.357.10 3 197 5.8E-38 T 14-10-2018 AMIS_74070 e09e363b4d64941aa0cf694432f7b921 211 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 82 191 7.5E-18 T 14-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal AMIS_74070 e09e363b4d64941aa0cf694432f7b921 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 59 2.3E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_12680 cb1c4bb98645de741eb52159da164d2b 328 SUPERFAMILY SSF51445 44 299 3.08E-15 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_12680 cb1c4bb98645de741eb52159da164d2b 328 Gene3D G3DSA:3.20.20.80 40 328 1.3E-81 T 14-10-2018 AMIS_30320 2cd3121cf8eafafacb6633da5d30336a 450 SUPERFAMILY SSF158472 166 214 7.45E-6 T 14-10-2018 AMIS_30320 2cd3121cf8eafafacb6633da5d30336a 450 SMART SM00388 218 283 1.5E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_30320 2cd3121cf8eafafacb6633da5d30336a 450 SUPERFAMILY SSF47384 201 283 1.41E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_30320 2cd3121cf8eafafacb6633da5d30336a 450 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 325 431 5.8E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_30320 2cd3121cf8eafafacb6633da5d30336a 450 SMART SM00304 164 217 4.3E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_30320 2cd3121cf8eafafacb6633da5d30336a 450 Gene3D G3DSA:1.10.287.130 168 284 8.9E-32 T 14-10-2018 AMIS_30320 2cd3121cf8eafafacb6633da5d30336a 450 Gene3D G3DSA:3.30.565.10 288 436 3.4E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_30320 2cd3121cf8eafafacb6633da5d30336a 450 Pfam PF00512 His Kinase A (phospho-acceptor) domain 218 282 1.3E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_30320 2cd3121cf8eafafacb6633da5d30336a 450 SUPERFAMILY SSF55874 272 432 4.06E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_30320 2cd3121cf8eafafacb6633da5d30336a 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 378 388 2.2E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_30320 2cd3121cf8eafafacb6633da5d30336a 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 413 2.2E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_30320 2cd3121cf8eafafacb6633da5d30336a 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 360 374 2.2E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_30320 2cd3121cf8eafafacb6633da5d30336a 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 431 2.2E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_30320 2cd3121cf8eafafacb6633da5d30336a 450 SMART SM00387 325 434 2.0E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_69580 acd9602d0162ee9e511f0ee3dab16316 435 TIGRFAM TIGR00797 matE: MATE efflux family protein 18 405 1.0E-89 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AMIS_69580 acd9602d0162ee9e511f0ee3dab16316 435 PIRSF PIRSF006603 8 433 1.1E-53 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AMIS_69580 acd9602d0162ee9e511f0ee3dab16316 435 Pfam PF01554 MatE 239 390 1.4E-19 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AMIS_69580 acd9602d0162ee9e511f0ee3dab16316 435 Pfam PF01554 MatE 18 178 3.3E-29 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AMIS_62020 5db794b6b921f62352b08addb205be11 489 Gene3D G3DSA:3.40.50.150 186 487 3.6E-57 T 14-10-2018 AMIS_62020 5db794b6b921f62352b08addb205be11 489 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 265 279 2.6E-23 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AMIS_62020 5db794b6b921f62352b08addb205be11 489 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 366 378 2.6E-23 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AMIS_62020 5db794b6b921f62352b08addb205be11 489 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 416 432 2.6E-23 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AMIS_62020 5db794b6b921f62352b08addb205be11 489 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 470 487 2.6E-23 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AMIS_62020 5db794b6b921f62352b08addb205be11 489 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 298 308 2.6E-23 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AMIS_62020 5db794b6b921f62352b08addb205be11 489 SUPERFAMILY SSF48013 41 194 2.29E-32 T 14-10-2018 IPR035926 NusB-like superfamily AMIS_62020 5db794b6b921f62352b08addb205be11 489 Pfam PF01189 16S rRNA methyltransferase RsmB/F 294 486 5.0E-45 T 14-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 AMIS_62020 5db794b6b921f62352b08addb205be11 489 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 365 376 - T 14-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 AMIS_62020 5db794b6b921f62352b08addb205be11 489 Pfam PF01029 NusB family 41 162 3.5E-24 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AMIS_62020 5db794b6b921f62352b08addb205be11 489 SUPERFAMILY SSF53335 180 487 3.03E-48 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_62020 5db794b6b921f62352b08addb205be11 489 Gene3D G3DSA:1.10.940.10 39 177 1.0E-37 T 14-10-2018 IPR035926 NusB-like superfamily AMIS_23830 063e0c2fe58f651a797b1c478b0ef179 282 Gene3D G3DSA:3.40.30.10 138 281 1.6E-22 T 14-10-2018 AMIS_23830 063e0c2fe58f651a797b1c478b0ef179 282 Pfam PF00578 AhpC/TSA family 171 258 3.7E-11 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AMIS_23830 063e0c2fe58f651a797b1c478b0ef179 282 SUPERFAMILY SSF46785 5 107 1.93E-32 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_23830 063e0c2fe58f651a797b1c478b0ef179 282 Gene3D G3DSA:1.10.10.10 1 137 1.8E-38 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_23830 063e0c2fe58f651a797b1c478b0ef179 282 SUPERFAMILY SSF52833 133 278 4.02E-23 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMIS_23830 063e0c2fe58f651a797b1c478b0ef179 282 Pfam PF01638 HxlR-like helix-turn-helix 19 104 2.1E-20 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type AMIS_69800 4d616322b44135bcfeae64b922fa479a 117 SUPERFAMILY SSF46955 10 90 8.24E-15 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily AMIS_69800 4d616322b44135bcfeae64b922fa479a 117 SMART SM00422 10 78 8.5E-14 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_69800 4d616322b44135bcfeae64b922fa479a 117 Gene3D G3DSA:1.10.1660.10 2 78 2.5E-16 T 14-10-2018 AMIS_69800 4d616322b44135bcfeae64b922fa479a 117 Pfam PF13411 MerR HTH family regulatory protein 10 73 6.3E-13 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_29440 1b9972dc37c0babce976fc118cffae76 239 Pfam PF13649 Methyltransferase domain 71 159 3.3E-11 T 14-10-2018 AMIS_29440 1b9972dc37c0babce976fc118cffae76 239 Gene3D G3DSA:3.40.50.150 29 173 8.6E-19 T 14-10-2018 AMIS_29440 1b9972dc37c0babce976fc118cffae76 239 SUPERFAMILY SSF53335 31 163 3.0E-21 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_79920 b800c9f37e0bfe068b92ae7d7dc685af 400 SUPERFAMILY SSF53474 31 399 6.3E-34 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_79920 b800c9f37e0bfe068b92ae7d7dc685af 400 Pfam PF12697 Alpha/beta hydrolase family 75 375 3.2E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_60590 de14bdb7ea971375774e9d4687b7125b 602 ProSitePatterns PS00455 Putative AMP-binding domain signature. 185 196 - T 14-10-2018 IPR020845 AMP-binding, conserved site AMIS_60590 de14bdb7ea971375774e9d4687b7125b 602 SUPERFAMILY SSF56801 15 600 3.92E-107 T 14-10-2018 AMIS_60590 de14bdb7ea971375774e9d4687b7125b 602 Gene3D G3DSA:3.40.50.12780 9 315 1.4E-49 T 14-10-2018 AMIS_60590 de14bdb7ea971375774e9d4687b7125b 602 Pfam PF00501 AMP-binding enzyme 24 470 2.2E-77 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMIS_60590 de14bdb7ea971375774e9d4687b7125b 602 Gene3D G3DSA:3.40.50.12780 320 464 2.7E-30 T 14-10-2018 AMIS_60590 de14bdb7ea971375774e9d4687b7125b 602 Gene3D G3DSA:3.30.300.30 469 600 1.8E-7 T 14-10-2018 AMIS_71140 9952d3f62d65f8506df48ed78a304899 248 Gene3D G3DSA:3.90.190.10 12 246 9.2E-61 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like AMIS_71140 9952d3f62d65f8506df48ed78a304899 248 SMART SM00404 86 203 0.0027 T 14-10-2018 IPR003595 Protein-tyrosine phosphatase, catalytic AMIS_71140 9952d3f62d65f8506df48ed78a304899 248 Pfam PF13350 Tyrosine phosphatase family 11 245 2.2E-61 T 14-10-2018 IPR026893 Tyrosine/serine-protein phosphatase IphP-type AMIS_71140 9952d3f62d65f8506df48ed78a304899 248 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 142 152 - T 14-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 AMIS_71140 9952d3f62d65f8506df48ed78a304899 248 SUPERFAMILY SSF52799 10 245 1.56E-51 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like AMIS_14150 8ef6fe0d4cd45d1adc52754fe2d41861 311 Gene3D G3DSA:2.60.40.2600 136 307 2.1E-41 T 14-10-2018 AMIS_14150 8ef6fe0d4cd45d1adc52754fe2d41861 311 SUPERFAMILY SSF49503 136 295 6.62E-40 T 14-10-2018 IPR008972 Cupredoxin AMIS_14150 8ef6fe0d4cd45d1adc52754fe2d41861 311 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 57 261 4.5E-46 T 14-10-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_14150 8ef6fe0d4cd45d1adc52754fe2d41861 311 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 196 245 - T 14-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_14150 8ef6fe0d4cd45d1adc52754fe2d41861 311 PRINTS PR01166 Cytochrome c oxidase subunit II signature 136 155 3.1E-11 T 14-10-2018 AMIS_14150 8ef6fe0d4cd45d1adc52754fe2d41861 311 PRINTS PR01166 Cytochrome c oxidase subunit II signature 195 215 3.1E-11 T 14-10-2018 AMIS_14150 8ef6fe0d4cd45d1adc52754fe2d41861 311 PRINTS PR01166 Cytochrome c oxidase subunit II signature 234 251 3.1E-11 T 14-10-2018 AMIS_14150 8ef6fe0d4cd45d1adc52754fe2d41861 311 PRINTS PR01166 Cytochrome c oxidase subunit II signature 101 113 3.1E-11 T 14-10-2018 AMIS_14150 8ef6fe0d4cd45d1adc52754fe2d41861 311 SUPERFAMILY SSF81464 27 132 3.92E-18 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_14150 8ef6fe0d4cd45d1adc52754fe2d41861 311 Gene3D G3DSA:1.10.287.90 55 130 3.3E-15 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_14150 8ef6fe0d4cd45d1adc52754fe2d41861 311 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 143 247 1.3E-17 T 14-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_14150 8ef6fe0d4cd45d1adc52754fe2d41861 311 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 55 120 1.8E-5 T 14-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_74170 60c6bc80cbb57e5fed344cb4fd741243 502 SUPERFAMILY SSF57884 2 82 3.27E-31 T 14-10-2018 IPR035451 Ada-like domain superfamily AMIS_74170 60c6bc80cbb57e5fed344cb4fd741243 502 SMART SM01009 198 313 4.2E-37 T 14-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal AMIS_74170 60c6bc80cbb57e5fed344cb4fd741243 502 SUPERFAMILY SSF55945 199 292 1.73E-22 T 14-10-2018 AMIS_74170 60c6bc80cbb57e5fed344cb4fd741243 502 Pfam PF12833 Helix-turn-helix domain 106 184 4.5E-16 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMIS_74170 60c6bc80cbb57e5fed344cb4fd741243 502 Gene3D G3DSA:3.30.310.20 198 313 9.4E-23 T 14-10-2018 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily AMIS_74170 60c6bc80cbb57e5fed344cb4fd741243 502 SMART SM00342 100 183 2.1E-16 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMIS_74170 60c6bc80cbb57e5fed344cb4fd741243 502 Gene3D G3DSA:1.10.1670.10 454 502 8.5E-14 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 AMIS_74170 60c6bc80cbb57e5fed344cb4fd741243 502 SUPERFAMILY SSF48150 304 500 1.92E-33 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AMIS_74170 60c6bc80cbb57e5fed344cb4fd741243 502 Gene3D G3DSA:3.40.10.10 1 73 5.5E-28 T 14-10-2018 IPR035451 Ada-like domain superfamily AMIS_74170 60c6bc80cbb57e5fed344cb4fd741243 502 SMART SM00478 371 501 1.0E-4 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AMIS_74170 60c6bc80cbb57e5fed344cb4fd741243 502 Pfam PF02805 Metal binding domain of Ada 8 71 1.6E-27 T 14-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 AMIS_74170 60c6bc80cbb57e5fed344cb4fd741243 502 Pfam PF06029 AlkA N-terminal domain 199 313 3.9E-27 T 14-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal AMIS_74170 60c6bc80cbb57e5fed344cb4fd741243 502 SUPERFAMILY SSF46689 137 185 3.94E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_74170 60c6bc80cbb57e5fed344cb4fd741243 502 Gene3D G3DSA:1.10.10.60 84 189 1.0E-15 T 14-10-2018 AMIS_74170 60c6bc80cbb57e5fed344cb4fd741243 502 Gene3D G3DSA:1.10.340.30 314 452 6.1E-28 T 14-10-2018 AMIS_55010 e71441779fe98007b4e2c79e64a743ef 328 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 98 1.6E-35 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_55010 e71441779fe98007b4e2c79e64a743ef 328 SUPERFAMILY SSF51735 2 147 9.7E-59 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_55010 e71441779fe98007b4e2c79e64a743ef 328 Gene3D G3DSA:3.30.360.10 147 310 1.2E-137 T 14-10-2018 AMIS_55010 e71441779fe98007b4e2c79e64a743ef 328 SMART SM00846 2 148 3.7E-88 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_55010 e71441779fe98007b4e2c79e64a743ef 328 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 146 153 - T 14-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_55010 e71441779fe98007b4e2c79e64a743ef 328 Gene3D G3DSA:3.40.50.720 3 321 1.2E-137 T 14-10-2018 AMIS_55010 e71441779fe98007b4e2c79e64a743ef 328 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 3 320 4.9E-119 T 14-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_55010 e71441779fe98007b4e2c79e64a743ef 328 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 153 308 2.7E-57 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_55010 e71441779fe98007b4e2c79e64a743ef 328 SUPERFAMILY SSF55347 148 309 4.17E-61 T 14-10-2018 AMIS_55010 e71441779fe98007b4e2c79e64a743ef 328 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 142 160 3.9E-31 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_55010 e71441779fe98007b4e2c79e64a743ef 328 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 105 118 3.9E-31 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_55010 e71441779fe98007b4e2c79e64a743ef 328 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 169 185 3.9E-31 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_55010 e71441779fe98007b4e2c79e64a743ef 328 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 225 242 3.9E-31 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_55010 e71441779fe98007b4e2c79e64a743ef 328 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 265 280 3.9E-31 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_55010 e71441779fe98007b4e2c79e64a743ef 328 PIRSF PIRSF000149 1 327 1.3E-120 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_18620 a18c87b3016a0f7a6570047d334b41e4 1072 Gene3D G3DSA:3.30.450.20 296 409 1.5E-22 T 14-10-2018 AMIS_18620 a18c87b3016a0f7a6570047d334b41e4 1072 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 170 292 1.4E-29 T 14-10-2018 IPR000014 PAS domain AMIS_18620 a18c87b3016a0f7a6570047d334b41e4 1072 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 296 417 3.5E-20 T 14-10-2018 IPR000014 PAS domain AMIS_18620 a18c87b3016a0f7a6570047d334b41e4 1072 Gene3D G3DSA:3.40.50.2300 666 799 6.6E-9 T 14-10-2018 AMIS_18620 a18c87b3016a0f7a6570047d334b41e4 1072 Pfam PF01627 Hpt domain 975 1051 3.4E-8 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AMIS_18620 a18c87b3016a0f7a6570047d334b41e4 1072 Gene3D G3DSA:3.30.565.10 494 664 3.3E-50 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_18620 a18c87b3016a0f7a6570047d334b41e4 1072 Pfam PF00512 His Kinase A (phospho-acceptor) domain 431 495 1.9E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_18620 a18c87b3016a0f7a6570047d334b41e4 1072 SUPERFAMILY SSF52172 674 798 6.83E-12 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_18620 a18c87b3016a0f7a6570047d334b41e4 1072 Gene3D G3DSA:1.10.287.130 410 493 4.5E-26 T 14-10-2018 AMIS_18620 a18c87b3016a0f7a6570047d334b41e4 1072 Pfam PF08448 PAS fold 177 287 2.4E-17 T 14-10-2018 IPR013656 PAS fold-4 AMIS_18620 a18c87b3016a0f7a6570047d334b41e4 1072 Pfam PF08448 PAS fold 45 153 5.5E-11 T 14-10-2018 IPR013656 PAS fold-4 AMIS_18620 a18c87b3016a0f7a6570047d334b41e4 1072 SUPERFAMILY SSF55785 37 145 4.01E-9 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_18620 a18c87b3016a0f7a6570047d334b41e4 1072 Gene3D G3DSA:3.30.450.20 168 295 4.8E-33 T 14-10-2018 AMIS_18620 a18c87b3016a0f7a6570047d334b41e4 1072 Gene3D G3DSA:1.20.120.160 947 1058 7.1E-12 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMIS_18620 a18c87b3016a0f7a6570047d334b41e4 1072 SMART SM00388 430 495 6.3E-22 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_18620 a18c87b3016a0f7a6570047d334b41e4 1072 Gene3D G3DSA:3.30.450.20 30 164 1.4E-10 T 14-10-2018 AMIS_18620 a18c87b3016a0f7a6570047d334b41e4 1072 SUPERFAMILY SSF55785 182 293 6.28E-28 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_18620 a18c87b3016a0f7a6570047d334b41e4 1072 Pfam PF00072 Response regulator receiver domain 821 928 1.1E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_18620 a18c87b3016a0f7a6570047d334b41e4 1072 SUPERFAMILY SSF55874 484 657 1.57E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_18620 a18c87b3016a0f7a6570047d334b41e4 1072 SMART SM00448 818 932 3.2E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_18620 a18c87b3016a0f7a6570047d334b41e4 1072 SMART SM00448 677 794 0.093 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_18620 a18c87b3016a0f7a6570047d334b41e4 1072 Pfam PF00989 PAS fold 297 407 1.0E-10 T 14-10-2018 IPR013767 PAS fold GO:0006355 AMIS_18620 a18c87b3016a0f7a6570047d334b41e4 1072 SMART SM00091 39 105 73.0 T 14-10-2018 IPR000014 PAS domain AMIS_18620 a18c87b3016a0f7a6570047d334b41e4 1072 SMART SM00091 297 363 1.5E-6 T 14-10-2018 IPR000014 PAS domain AMIS_18620 a18c87b3016a0f7a6570047d334b41e4 1072 SMART SM00091 171 237 1.6E-12 T 14-10-2018 IPR000014 PAS domain AMIS_18620 a18c87b3016a0f7a6570047d334b41e4 1072 SMART SM00086 243 285 2.7E-5 T 14-10-2018 IPR001610 PAC motif AMIS_18620 a18c87b3016a0f7a6570047d334b41e4 1072 SMART SM00086 370 410 5.8 T 14-10-2018 IPR001610 PAC motif AMIS_18620 a18c87b3016a0f7a6570047d334b41e4 1072 SUPERFAMILY SSF52172 818 938 4.27E-32 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_18620 a18c87b3016a0f7a6570047d334b41e4 1072 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 542 659 2.4E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_18620 a18c87b3016a0f7a6570047d334b41e4 1072 SUPERFAMILY SSF55785 282 408 7.18E-24 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_18620 a18c87b3016a0f7a6570047d334b41e4 1072 PRINTS PR00344 Bacterial sensor protein C-terminal signature 621 639 5.7E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_18620 a18c87b3016a0f7a6570047d334b41e4 1072 PRINTS PR00344 Bacterial sensor protein C-terminal signature 645 658 5.7E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_18620 a18c87b3016a0f7a6570047d334b41e4 1072 PRINTS PR00344 Bacterial sensor protein C-terminal signature 586 600 5.7E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_18620 a18c87b3016a0f7a6570047d334b41e4 1072 PRINTS PR00344 Bacterial sensor protein C-terminal signature 604 614 5.7E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_18620 a18c87b3016a0f7a6570047d334b41e4 1072 SUPERFAMILY SSF47226 915 1042 5.23E-12 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMIS_18620 a18c87b3016a0f7a6570047d334b41e4 1072 SUPERFAMILY SSF47384 415 496 1.1E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_18620 a18c87b3016a0f7a6570047d334b41e4 1072 SMART SM00387 542 661 2.5E-38 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_18620 a18c87b3016a0f7a6570047d334b41e4 1072 Gene3D G3DSA:3.40.50.2300 815 936 5.5E-36 T 14-10-2018 AMIS_16190 30e779afd561b4af079b3e120f2ee0fe 370 SUPERFAMILY SSF51569 7 362 9.52E-76 T 14-10-2018 AMIS_16190 30e779afd561b4af079b3e120f2ee0fe 370 TIGRFAM TIGR00876 tal_mycobact: transaldolase 11 358 1.8E-136 T 14-10-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 AMIS_16190 30e779afd561b4af079b3e120f2ee0fe 370 PIRSF PIRSF036915 1 368 6.4E-168 T 14-10-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 AMIS_16190 30e779afd561b4af079b3e120f2ee0fe 370 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 15 359 6.1E-78 T 14-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AMIS_16190 30e779afd561b4af079b3e120f2ee0fe 370 Gene3D G3DSA:3.20.20.70 2 365 1.2E-155 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_16190 30e779afd561b4af079b3e120f2ee0fe 370 ProSitePatterns PS01054 Transaldolase signature 1. 41 49 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AMIS_16190 30e779afd561b4af079b3e120f2ee0fe 370 ProSitePatterns PS00958 Transaldolase active site. 137 154 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AMIS_16190 30e779afd561b4af079b3e120f2ee0fe 370 Hamap MF_00493 Transaldolase [tal]. 1 370 155.697 T 14-10-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 AMIS_60600 474220574d2655b8d33b964467c4fb60 393 SUPERFAMILY SSF46689 12 82 1.5E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_60600 474220574d2655b8d33b964467c4fb60 393 ProSitePatterns PS01081 TetR-type HTH domain signature. 37 68 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMIS_60600 474220574d2655b8d33b964467c4fb60 393 SUPERFAMILY SSF46689 212 288 2.26E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_60600 474220574d2655b8d33b964467c4fb60 393 Gene3D G3DSA:1.10.10.60 19 61 4.6E-20 T 14-10-2018 AMIS_60600 474220574d2655b8d33b964467c4fb60 393 Gene3D G3DSA:1.10.10.60 213 254 2.5E-14 T 14-10-2018 AMIS_60600 474220574d2655b8d33b964467c4fb60 393 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 46 69 1.1E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_60600 474220574d2655b8d33b964467c4fb60 393 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 25 38 1.1E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_60600 474220574d2655b8d33b964467c4fb60 393 Gene3D G3DSA:1.10.357.10 255 393 2.8E-28 T 14-10-2018 AMIS_60600 474220574d2655b8d33b964467c4fb60 393 Gene3D G3DSA:1.10.357.10 62 192 3.3E-13 T 14-10-2018 AMIS_60600 474220574d2655b8d33b964467c4fb60 393 Pfam PF00440 Bacterial regulatory proteins, tetR family 218 264 9.8E-15 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_60600 474220574d2655b8d33b964467c4fb60 393 Pfam PF00440 Bacterial regulatory proteins, tetR family 28 68 6.9E-15 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_38400 d80e78fefa14c75aaafc4087f85254f2 279 Gene3D G3DSA:3.40.50.1820 1 278 4.6E-62 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_38400 d80e78fefa14c75aaafc4087f85254f2 279 SUPERFAMILY SSF53474 1 275 4.39E-59 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_38400 d80e78fefa14c75aaafc4087f85254f2 279 PRINTS PR00111 Alpha/beta hydrolase fold signature 47 62 4.7E-16 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_38400 d80e78fefa14c75aaafc4087f85254f2 279 PRINTS PR00111 Alpha/beta hydrolase fold signature 91 104 4.7E-16 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_38400 d80e78fefa14c75aaafc4087f85254f2 279 PRINTS PR00111 Alpha/beta hydrolase fold signature 219 233 4.7E-16 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_38400 d80e78fefa14c75aaafc4087f85254f2 279 PRINTS PR00111 Alpha/beta hydrolase fold signature 105 118 4.7E-16 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_38400 d80e78fefa14c75aaafc4087f85254f2 279 Pfam PF00561 alpha/beta hydrolase fold 22 262 2.4E-22 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_39020 eec1dd27110b72bc3dcbc3a3cf6413a9 355 Pfam PF12840 Helix-turn-helix domain 40 88 5.1E-8 T 14-10-2018 AMIS_39020 eec1dd27110b72bc3dcbc3a3cf6413a9 355 Gene3D G3DSA:1.10.10.10 35 110 1.0E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_39020 eec1dd27110b72bc3dcbc3a3cf6413a9 355 SUPERFAMILY SSF46785 40 89 6.0E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_31720 0065448a90c7578bf765952acf6e017d 873 Gene3D G3DSA:3.40.50.300 4 158 8.4E-7 T 14-10-2018 AMIS_31720 0065448a90c7578bf765952acf6e017d 873 SUPERFAMILY SSF52540 9 205 1.29E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_31720 0065448a90c7578bf765952acf6e017d 873 Pfam PF00196 Bacterial regulatory proteins, luxR family 813 864 4.2E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_31720 0065448a90c7578bf765952acf6e017d 873 Pfam PF13191 AAA ATPase domain 9 147 1.2E-11 T 14-10-2018 AMIS_31720 0065448a90c7578bf765952acf6e017d 873 SUPERFAMILY SSF46894 804 867 6.12E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_31720 0065448a90c7578bf765952acf6e017d 873 Gene3D G3DSA:1.25.40.10 284 474 3.9E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_31720 0065448a90c7578bf765952acf6e017d 873 SUPERFAMILY SSF48452 330 434 3.32E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_31720 0065448a90c7578bf765952acf6e017d 873 Gene3D G3DSA:1.10.10.10 787 868 2.0E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_31720 0065448a90c7578bf765952acf6e017d 873 SMART SM00421 811 868 1.6E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_31720 0065448a90c7578bf765952acf6e017d 873 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 828 844 3.3E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_31720 0065448a90c7578bf765952acf6e017d 873 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 844 856 3.3E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_31720 0065448a90c7578bf765952acf6e017d 873 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 814 828 3.3E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_49930 e5661cc056a8201965e58ce208130159 451 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 344 449 2.3E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_49930 e5661cc056a8201965e58ce208130159 451 Gene3D G3DSA:3.30.565.10 305 450 1.9E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_49930 e5661cc056a8201965e58ce208130159 451 SUPERFAMILY SSF55874 290 449 5.76E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_49930 e5661cc056a8201965e58ce208130159 451 SMART SM00387 342 451 3.3E-35 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_49930 e5661cc056a8201965e58ce208130159 451 Gene3D G3DSA:1.10.287.130 186 301 7.4E-28 T 14-10-2018 AMIS_49930 e5661cc056a8201965e58ce208130159 451 Pfam PF00672 HAMP domain 184 231 1.2E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_49930 e5661cc056a8201965e58ce208130159 451 SUPERFAMILY SSF47384 219 301 2.55E-16 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_49930 e5661cc056a8201965e58ce208130159 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 430 1.4E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_49930 e5661cc056a8201965e58ce208130159 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 405 1.4E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_49930 e5661cc056a8201965e58ce208130159 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 377 391 1.4E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_49930 e5661cc056a8201965e58ce208130159 451 SMART SM00304 182 235 4.2E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_49930 e5661cc056a8201965e58ce208130159 451 SUPERFAMILY SSF158472 185 231 6.8E-6 T 14-10-2018 AMIS_49930 e5661cc056a8201965e58ce208130159 451 SMART SM00388 236 301 3.1E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_49930 e5661cc056a8201965e58ce208130159 451 Pfam PF00512 His Kinase A (phospho-acceptor) domain 237 301 6.0E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_62460 a4d34082f82c80182c2b839db57440df 392 Gene3D G3DSA:2.40.37.20 21 392 4.7E-131 T 14-10-2018 AMIS_62460 a4d34082f82c80182c2b839db57440df 392 Pfam PF01168 Alanine racemase, N-terminal domain 38 237 7.7E-19 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMIS_62460 a4d34082f82c80182c2b839db57440df 392 Gene3D G3DSA:3.20.20.10 40 280 4.7E-131 T 14-10-2018 IPR029066 PLP-binding barrel AMIS_62460 a4d34082f82c80182c2b839db57440df 392 SUPERFAMILY SSF51419 40 240 7.85E-26 T 14-10-2018 IPR029066 PLP-binding barrel AMIS_62460 a4d34082f82c80182c2b839db57440df 392 SMART SM01119 283 379 8.3E-30 T 14-10-2018 IPR026956 D-serine dehydratase-like domain AMIS_62460 a4d34082f82c80182c2b839db57440df 392 Pfam PF14031 Putative serine dehydratase domain 283 378 5.6E-12 T 14-10-2018 IPR026956 D-serine dehydratase-like domain AMIS_50930 20fdf53778c50d98dd0ca66f09f2129a 277 Pfam PF01872 RibD C-terminal domain 1 102 4.1E-18 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 AMIS_50930 20fdf53778c50d98dd0ca66f09f2129a 277 Pfam PF01872 RibD C-terminal domain 182 265 3.9E-17 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 AMIS_50930 20fdf53778c50d98dd0ca66f09f2129a 277 SUPERFAMILY SSF53597 1 268 2.07E-24 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AMIS_50930 20fdf53778c50d98dd0ca66f09f2129a 277 Gene3D G3DSA:3.40.430.10 1 129 3.8E-24 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AMIS_50930 20fdf53778c50d98dd0ca66f09f2129a 277 Gene3D G3DSA:3.40.430.10 158 274 2.5E-22 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AMIS_37580 2ce692d540dc93b43d836262a12db2ce 477 SUPERFAMILY SSF53720 3 463 1.96E-142 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMIS_37580 2ce692d540dc93b43d836262a12db2ce 477 Pfam PF00171 Aldehyde dehydrogenase family 3 457 6.8E-141 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AMIS_37580 2ce692d540dc93b43d836262a12db2ce 477 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 2 461 3.3E-205 T 14-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 AMIS_37580 2ce692d540dc93b43d836262a12db2ce 477 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 255 266 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AMIS_37580 2ce692d540dc93b43d836262a12db2ce 477 Gene3D G3DSA:3.40.605.10 4 438 3.9E-148 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AMIS_37580 2ce692d540dc93b43d836262a12db2ce 477 Gene3D G3DSA:3.40.309.10 230 430 3.9E-148 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AMIS_71750 2a2ad3b968a217a738c4ec19faef52ba 497 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 244 251 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AMIS_71750 2a2ad3b968a217a738c4ec19faef52ba 497 Gene3D G3DSA:3.40.309.10 252 435 8.4E-137 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AMIS_71750 2a2ad3b968a217a738c4ec19faef52ba 497 Pfam PF00171 Aldehyde dehydrogenase family 19 461 3.6E-124 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AMIS_71750 2a2ad3b968a217a738c4ec19faef52ba 497 Gene3D G3DSA:3.40.605.10 19 459 8.4E-137 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AMIS_71750 2a2ad3b968a217a738c4ec19faef52ba 497 SUPERFAMILY SSF53720 14 464 2.36E-133 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMIS_71750 2a2ad3b968a217a738c4ec19faef52ba 497 PIRSF PIRSF036492 33 497 8.6E-92 T 14-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 AMIS_60880 8d1b5c6ac177f2a20e2dbc969fc3772f 192 SUPERFAMILY SSF55811 6 180 3.93E-42 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMIS_60880 8d1b5c6ac177f2a20e2dbc969fc3772f 192 Gene3D G3DSA:3.90.79.10 3 191 1.7E-54 T 14-10-2018 AMIS_60880 8d1b5c6ac177f2a20e2dbc969fc3772f 192 Pfam PF00293 NUDIX domain 42 142 4.6E-13 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMIS_6720 16acd853713c21f3e6040a5c94c77c5f 350 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 7 323 7.7E-123 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 AMIS_6720 16acd853713c21f3e6040a5c94c77c5f 350 SUPERFAMILY SSF53067 6 319 1.68E-36 T 14-10-2018 AMIS_6720 16acd853713c21f3e6040a5c94c77c5f 350 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 79 99 4.2E-51 T 14-10-2018 IPR017861 Kae1/TsaD family AMIS_6720 16acd853713c21f3e6040a5c94c77c5f 350 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 158 179 4.2E-51 T 14-10-2018 IPR017861 Kae1/TsaD family AMIS_6720 16acd853713c21f3e6040a5c94c77c5f 350 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 100 119 4.2E-51 T 14-10-2018 IPR017861 Kae1/TsaD family AMIS_6720 16acd853713c21f3e6040a5c94c77c5f 350 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 274 283 4.2E-51 T 14-10-2018 IPR017861 Kae1/TsaD family AMIS_6720 16acd853713c21f3e6040a5c94c77c5f 350 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 134 146 4.2E-51 T 14-10-2018 IPR017861 Kae1/TsaD family AMIS_6720 16acd853713c21f3e6040a5c94c77c5f 350 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 8 21 4.2E-51 T 14-10-2018 IPR017861 Kae1/TsaD family AMIS_6720 16acd853713c21f3e6040a5c94c77c5f 350 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 8 317 1.7E-94 T 14-10-2018 IPR017861 Kae1/TsaD family AMIS_6720 16acd853713c21f3e6040a5c94c77c5f 350 Gene3D G3DSA:3.30.420.40 132 304 6.5E-113 T 14-10-2018 AMIS_6720 16acd853713c21f3e6040a5c94c77c5f 350 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 5 343 61.298 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 AMIS_6720 16acd853713c21f3e6040a5c94c77c5f 350 Pfam PF00814 Glycoprotease family 27 317 8.7E-92 T 14-10-2018 IPR000905 Gcp-like domain AMIS_6720 16acd853713c21f3e6040a5c94c77c5f 350 Gene3D G3DSA:3.30.420.40 7 324 6.5E-113 T 14-10-2018 AMIS_51470 d6c1dbcc2e9f4a2883b4bb06ed01f0dc 367 SUPERFAMILY SSF52540 3 176 8.18E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_51470 d6c1dbcc2e9f4a2883b4bb06ed01f0dc 367 Gene3D G3DSA:3.40.50.300 5 177 1.7E-6 T 14-10-2018 AMIS_58160 ad7837e17e6dc7aaeeffcc1d1c8496c0 401 Gene3D G3DSA:3.50.50.60 3 335 2.8E-116 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_58160 ad7837e17e6dc7aaeeffcc1d1c8496c0 401 Pfam PF01494 FAD binding domain 115 318 7.2E-15 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 AMIS_58160 ad7837e17e6dc7aaeeffcc1d1c8496c0 401 SUPERFAMILY SSF51905 2 345 7.25E-43 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_58160 ad7837e17e6dc7aaeeffcc1d1c8496c0 401 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 278 294 4.1E-12 T 14-10-2018 AMIS_58160 ad7837e17e6dc7aaeeffcc1d1c8496c0 401 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 4.1E-12 T 14-10-2018 AMIS_58160 ad7837e17e6dc7aaeeffcc1d1c8496c0 401 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 128 143 4.1E-12 T 14-10-2018 AMIS_58160 ad7837e17e6dc7aaeeffcc1d1c8496c0 401 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 263 278 4.1E-12 T 14-10-2018 AMIS_58160 ad7837e17e6dc7aaeeffcc1d1c8496c0 401 Gene3D G3DSA:3.30.9.20 40 252 2.8E-116 T 14-10-2018 AMIS_73860 67add154181a95450fc47fdcc4bef9ca 401 Gene3D G3DSA:1.10.540.10 1 127 5.3E-46 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMIS_73860 67add154181a95450fc47fdcc4bef9ca 401 Gene3D G3DSA:2.40.110.10 128 243 4.8E-47 T 14-10-2018 AMIS_73860 67add154181a95450fc47fdcc4bef9ca 401 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 129 231 2.1E-18 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMIS_73860 67add154181a95450fc47fdcc4bef9ca 401 SUPERFAMILY SSF56645 2 256 5.1E-63 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMIS_73860 67add154181a95450fc47fdcc4bef9ca 401 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 243 393 4.2E-35 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMIS_73860 67add154181a95450fc47fdcc4bef9ca 401 SUPERFAMILY SSF47203 241 398 1.14E-43 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMIS_73860 67add154181a95450fc47fdcc4bef9ca 401 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 9 125 7.2E-14 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMIS_73860 67add154181a95450fc47fdcc4bef9ca 401 Gene3D G3DSA:1.20.140.10 244 400 2.1E-39 T 14-10-2018 AMIS_42190 f34b0ccd3345c37038813f3dd425c4ea 447 Gene3D G3DSA:1.10.1740.10 2 79 3.6E-5 T 14-10-2018 AMIS_42190 f34b0ccd3345c37038813f3dd425c4ea 447 Pfam PF04542 Sigma-70 region 2 16 76 1.2E-7 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_42190 f34b0ccd3345c37038813f3dd425c4ea 447 SUPERFAMILY SSF88946 15 88 9.42E-11 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_9720 338d6c2ec775b3233f8061e9af47160b 417 Gene3D G3DSA:2.60.40.290 29 137 2.7E-37 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 AMIS_9720 338d6c2ec775b3233f8061e9af47160b 417 SUPERFAMILY SSF49899 191 416 1.11E-62 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily AMIS_9720 338d6c2ec775b3233f8061e9af47160b 417 Gene3D G3DSA:2.60.120.180 172 417 1.9E-76 T 14-10-2018 IPR013319 Glycoside hydrolase family 11/12 GO:0004553 MetaCyc: PWY-6717|MetaCyc: PWY-6784 AMIS_9720 338d6c2ec775b3233f8061e9af47160b 417 Pfam PF01670 Glycosyl hydrolase family 12 203 416 5.4E-36 T 14-10-2018 IPR002594 Glycoside hydrolase family 12 GO:0000272|GO:0008810 AMIS_9720 338d6c2ec775b3233f8061e9af47160b 417 SUPERFAMILY SSF49384 32 134 1.05E-32 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 AMIS_9720 338d6c2ec775b3233f8061e9af47160b 417 Pfam PF00553 Cellulose binding domain 35 134 3.0E-30 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 AMIS_9720 338d6c2ec775b3233f8061e9af47160b 417 SMART SM00637 35 134 1.0E-45 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 AMIS_2050 fe002a99c87bb7bdedcb1b7b4944c284 389 Pfam PF04055 Radical SAM superfamily 61 229 2.6E-11 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMIS_2050 fe002a99c87bb7bdedcb1b7b4944c284 389 PIRSF PIRSF004762 1 379 1.8E-98 T 14-10-2018 AMIS_2050 fe002a99c87bb7bdedcb1b7b4944c284 389 SUPERFAMILY SSF102114 16 361 1.7E-39 T 14-10-2018 AMIS_2050 fe002a99c87bb7bdedcb1b7b4944c284 389 Gene3D G3DSA:3.20.20.70 3 367 1.3E-48 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_2050 fe002a99c87bb7bdedcb1b7b4944c284 389 TIGRFAM TIGR00423 TIGR00423: radical SAM domain protein, CofH subfamily 52 368 4.7E-96 T 14-10-2018 IPR020050 FO synthase, subunit 2 GO:0016765 KEGG: 00680+2.5.1.77 AMIS_2050 fe002a99c87bb7bdedcb1b7b4944c284 389 Hamap MF_00993 Aminodeoxyfutalosine synthase [mqnE]. 7 371 47.568 T 14-10-2018 IPR022432 Aminodeoxyfutalosine synthase GO:0009234 KEGG: 00130+2.5.1.120|MetaCyc: PWY-7371|MetaCyc: PWY-7374 AMIS_2050 fe002a99c87bb7bdedcb1b7b4944c284 389 TIGRFAM TIGR03700 mena_SCO4494: putative menaquinone biosynthesis radical SAM enzyme, SCO4494 family 10 368 9.7E-157 T 14-10-2018 IPR022432 Aminodeoxyfutalosine synthase GO:0009234 KEGG: 00130+2.5.1.120|MetaCyc: PWY-7371|MetaCyc: PWY-7374 AMIS_68570 65c533eb49b09999cde3578e7457e8ce 535 Pfam PF04542 Sigma-70 region 2 302 371 2.1E-22 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_68570 65c533eb49b09999cde3578e7457e8ce 535 SUPERFAMILY SSF88946 230 372 4.15E-55 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_68570 65c533eb49b09999cde3578e7457e8ce 535 Pfam PF00140 Sigma-70 factor, region 1.2 233 266 5.1E-17 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_68570 65c533eb49b09999cde3578e7457e8ce 535 PRINTS PR00046 Major sigma-70 factor signature 326 339 4.9E-29 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMIS_68570 65c533eb49b09999cde3578e7457e8ce 535 PRINTS PR00046 Major sigma-70 factor signature 350 358 4.9E-29 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMIS_68570 65c533eb49b09999cde3578e7457e8ce 535 PRINTS PR00046 Major sigma-70 factor signature 510 521 4.9E-29 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMIS_68570 65c533eb49b09999cde3578e7457e8ce 535 PRINTS PR00046 Major sigma-70 factor signature 474 486 4.9E-29 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMIS_68570 65c533eb49b09999cde3578e7457e8ce 535 PRINTS PR00046 Major sigma-70 factor signature 495 510 4.9E-29 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMIS_68570 65c533eb49b09999cde3578e7457e8ce 535 Gene3D G3DSA:1.10.601.10 270 374 1.0E-51 T 14-10-2018 AMIS_68570 65c533eb49b09999cde3578e7457e8ce 535 Gene3D G3DSA:1.10.601.10 231 269 7.3E-10 T 14-10-2018 AMIS_68570 65c533eb49b09999cde3578e7457e8ce 535 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 326 339 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMIS_68570 65c533eb49b09999cde3578e7457e8ce 535 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 135 535 32.758 T 14-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 AMIS_68570 65c533eb49b09999cde3578e7457e8ce 535 Pfam PF04539 Sigma-70 region 3 381 456 1.9E-28 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 AMIS_68570 65c533eb49b09999cde3578e7457e8ce 535 SUPERFAMILY SSF88659 375 448 2.43E-22 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_68570 65c533eb49b09999cde3578e7457e8ce 535 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 298 523 1.8E-35 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_68570 65c533eb49b09999cde3578e7457e8ce 535 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 495 521 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMIS_68570 65c533eb49b09999cde3578e7457e8ce 535 Gene3D G3DSA:1.10.10.10 458 535 2.0E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_68570 65c533eb49b09999cde3578e7457e8ce 535 SUPERFAMILY SSF88659 434 534 1.64E-26 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_68570 65c533eb49b09999cde3578e7457e8ce 535 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 298 534 4.6E-114 T 14-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 AMIS_68570 65c533eb49b09999cde3578e7457e8ce 535 Pfam PF04545 Sigma-70, region 4 470 523 1.6E-18 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 AMIS_68570 65c533eb49b09999cde3578e7457e8ce 535 Gene3D G3DSA:1.10.10.10 375 450 3.6E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_43370 7cf8fd19f407f1a97ee2aaf7ad33565e 204 Gene3D G3DSA:1.10.357.10 1 193 8.0E-37 T 14-10-2018 AMIS_43370 7cf8fd19f407f1a97ee2aaf7ad33565e 204 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 113 182 1.9E-9 T 14-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal AMIS_43370 7cf8fd19f407f1a97ee2aaf7ad33565e 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 63 4.0E-18 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_43370 7cf8fd19f407f1a97ee2aaf7ad33565e 204 SUPERFAMILY SSF48498 109 186 9.89E-9 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_43370 7cf8fd19f407f1a97ee2aaf7ad33565e 204 SUPERFAMILY SSF46689 1 83 1.28E-20 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_43370 7cf8fd19f407f1a97ee2aaf7ad33565e 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 3.3E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_43370 7cf8fd19f407f1a97ee2aaf7ad33565e 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 3.3E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_52020 ec5bea866cb36894635fc8b9ad0179b2 333 Pfam PF12833 Helix-turn-helix domain 249 330 2.5E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMIS_52020 ec5bea866cb36894635fc8b9ad0179b2 333 SUPERFAMILY SSF46689 227 277 1.5E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_52020 ec5bea866cb36894635fc8b9ad0179b2 333 SUPERFAMILY SSF46689 295 330 2.51E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_52020 ec5bea866cb36894635fc8b9ad0179b2 333 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 280 325 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AMIS_52020 ec5bea866cb36894635fc8b9ad0179b2 333 SMART SM00342 243 329 2.6E-24 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMIS_52020 ec5bea866cb36894635fc8b9ad0179b2 333 Pfam PF14525 AraC-binding-like domain 35 205 9.5E-32 T 14-10-2018 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like AMIS_52020 ec5bea866cb36894635fc8b9ad0179b2 333 Gene3D G3DSA:1.10.10.60 227 332 3.1E-32 T 14-10-2018 AMIS_35730 584090000adee33625a32b9247e83780 1062 Pfam PF07691 PA14 domain 79 170 1.0E-19 T 14-10-2018 IPR011658 PA14 domain AMIS_35730 584090000adee33625a32b9247e83780 1062 SUPERFAMILY SSF51445 557 839 6.21E-55 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_35730 584090000adee33625a32b9247e83780 1062 SUPERFAMILY SSF49303 474 561 1.93E-14 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily AMIS_35730 584090000adee33625a32b9247e83780 1062 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 604 714 2.8E-4 T 14-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 AMIS_35730 584090000adee33625a32b9247e83780 1062 Pfam PF00703 Glycosyl hydrolases family 2 473 560 6.7E-10 T 14-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AMIS_35730 584090000adee33625a32b9247e83780 1062 Gene3D G3DSA:2.60.40.10 473 561 1.1E-12 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_35730 584090000adee33625a32b9247e83780 1062 Gene3D G3DSA:2.60.120.200 859 1060 1.8E-40 T 14-10-2018 AMIS_35730 584090000adee33625a32b9247e83780 1062 SUPERFAMILY SSF56988 38 186 1.83E-33 T 14-10-2018 AMIS_35730 584090000adee33625a32b9247e83780 1062 SMART SM00758 37 179 1.7E-22 T 14-10-2018 IPR011658 PA14 domain AMIS_35730 584090000adee33625a32b9247e83780 1062 Gene3D G3DSA:3.20.20.80 571 839 1.6E-43 T 14-10-2018 AMIS_35730 584090000adee33625a32b9247e83780 1062 Gene3D G3DSA:2.60.120.260 308 471 5.9E-36 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_35730 584090000adee33625a32b9247e83780 1062 SMART SM00560 919 1051 3.5E-16 T 14-10-2018 IPR006558 LamG-like jellyroll fold AMIS_35730 584090000adee33625a32b9247e83780 1062 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 349 433 7.1E-12 T 14-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AMIS_35730 584090000adee33625a32b9247e83780 1062 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 902 1054 1.2E-26 T 14-10-2018 AMIS_35730 584090000adee33625a32b9247e83780 1062 SUPERFAMILY SSF49785 304 470 2.98E-41 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_35730 584090000adee33625a32b9247e83780 1062 Gene3D G3DSA:3.90.182.10 29 189 3.4E-18 T 14-10-2018 AMIS_35730 584090000adee33625a32b9247e83780 1062 SUPERFAMILY SSF49899 860 1058 2.45E-38 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily AMIS_30120 4918f6658ee6bb08f6efd8c8303cc1d6 208 SMART SM00895 79 204 8.1E-12 T 14-10-2018 IPR011711 GntR, C-terminal AMIS_30120 4918f6658ee6bb08f6efd8c8303cc1d6 208 Gene3D G3DSA:1.10.10.10 3 70 2.4E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_30120 4918f6658ee6bb08f6efd8c8303cc1d6 208 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 69 5.0E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_30120 4918f6658ee6bb08f6efd8c8303cc1d6 208 Gene3D G3DSA:1.20.120.530 73 207 8.7E-21 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AMIS_30120 4918f6658ee6bb08f6efd8c8303cc1d6 208 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 29 43 1.5E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_30120 4918f6658ee6bb08f6efd8c8303cc1d6 208 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 59 1.5E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_30120 4918f6658ee6bb08f6efd8c8303cc1d6 208 SUPERFAMILY SSF46785 4 73 6.68E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_30120 4918f6658ee6bb08f6efd8c8303cc1d6 208 SMART SM00345 11 69 1.1E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_30120 4918f6658ee6bb08f6efd8c8303cc1d6 208 SUPERFAMILY SSF48008 77 204 2.48E-19 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AMIS_30120 4918f6658ee6bb08f6efd8c8303cc1d6 208 Pfam PF07729 FCD domain 79 203 1.0E-18 T 14-10-2018 IPR011711 GntR, C-terminal AMIS_57590 909e01ae844988d14d123c8e1a48d98b 190 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 27 182 1.4E-27 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_57590 909e01ae844988d14d123c8e1a48d98b 190 Gene3D G3DSA:1.10.1740.10 6 109 1.6E-22 T 14-10-2018 AMIS_57590 909e01ae844988d14d123c8e1a48d98b 190 SUPERFAMILY SSF88946 9 101 6.91E-21 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_57590 909e01ae844988d14d123c8e1a48d98b 190 Gene3D G3DSA:1.10.10.10 111 183 4.9E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_57590 909e01ae844988d14d123c8e1a48d98b 190 Pfam PF04542 Sigma-70 region 2 43 95 1.4E-14 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_57590 909e01ae844988d14d123c8e1a48d98b 190 SUPERFAMILY SSF88659 112 182 2.99E-15 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_57590 909e01ae844988d14d123c8e1a48d98b 190 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 50 80 - T 14-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_57590 909e01ae844988d14d123c8e1a48d98b 190 Pfam PF08281 Sigma-70, region 4 129 178 9.8E-13 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_46640 0a526a2b2be3dc18b34d232e463bfdec 455 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 39 372 1.9E-74 T 14-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 AMIS_46640 0a526a2b2be3dc18b34d232e463bfdec 455 Gene3D G3DSA:3.40.640.10 65 351 2.9E-79 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_46640 0a526a2b2be3dc18b34d232e463bfdec 455 SUPERFAMILY SSF53383 23 439 8.52E-133 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_46640 0a526a2b2be3dc18b34d232e463bfdec 455 TIGRFAM TIGR01788 Glu-decarb-GAD: glutamate decarboxylase 23 437 2.2E-194 T 14-10-2018 IPR010107 Glutamate decarboxylase GO:0004351|GO:0006536|GO:0030170 KEGG: 00250+4.1.1.15|KEGG: 00410+4.1.1.15|KEGG: 00430+4.1.1.15|KEGG: 00650+4.1.1.15|MetaCyc: PWY-4321 AMIS_46640 0a526a2b2be3dc18b34d232e463bfdec 455 Gene3D G3DSA:3.90.1150.160 353 455 2.6E-31 T 14-10-2018 AMIS_71570 c4dfb1abc52a3ec27610e24436f90780 391 Gene3D G3DSA:3.30.420.40 212 361 2.1E-25 T 14-10-2018 AMIS_71570 c4dfb1abc52a3ec27610e24436f90780 391 Gene3D G3DSA:1.10.10.10 2 76 4.8E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_71570 c4dfb1abc52a3ec27610e24436f90780 391 SUPERFAMILY SSF46785 13 76 6.53E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_71570 c4dfb1abc52a3ec27610e24436f90780 391 Gene3D G3DSA:3.30.420.40 77 211 7.1E-27 T 14-10-2018 AMIS_71570 c4dfb1abc52a3ec27610e24436f90780 391 SUPERFAMILY SSF53067 84 383 7.02E-39 T 14-10-2018 AMIS_71570 c4dfb1abc52a3ec27610e24436f90780 391 Pfam PF00480 ROK family 86 358 2.9E-37 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AMIS_71570 c4dfb1abc52a3ec27610e24436f90780 391 Pfam PF12802 MarR family 17 70 2.7E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_67480 3801e37d172ebd979ade5fd1a5901e82 183 Gene3D G3DSA:3.40.630.30 3 180 9.1E-43 T 14-10-2018 AMIS_67480 3801e37d172ebd979ade5fd1a5901e82 183 Pfam PF13523 Acetyltransferase (GNAT) domain 20 164 6.8E-46 T 14-10-2018 AMIS_67480 3801e37d172ebd979ade5fd1a5901e82 183 SMART SM01006 17 65 1.1E-9 T 14-10-2018 IPR019432 Siderophore biosynthesis protein, conserved domain AMIS_67480 3801e37d172ebd979ade5fd1a5901e82 183 SUPERFAMILY SSF55729 10 176 1.79E-34 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_18740 29001daf969d929c2dca16ec72e68b34 161 SUPERFAMILY SSF88946 8 86 1.61E-13 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_18740 29001daf969d929c2dca16ec72e68b34 161 SUPERFAMILY SSF88659 101 155 8.04E-15 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_18740 29001daf969d929c2dca16ec72e68b34 161 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 20 156 3.3E-22 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_18740 29001daf969d929c2dca16ec72e68b34 161 TIGRFAM TIGR02983 SigE-fam_strep: RNA polymerase sigma-70 factor, sigma-E family 8 156 6.5E-47 T 14-10-2018 IPR014325 RNA polymerase sigma-E factor, actinobacteria GO:0016987 AMIS_18740 29001daf969d929c2dca16ec72e68b34 161 Pfam PF04542 Sigma-70 region 2 19 80 3.0E-11 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_18740 29001daf969d929c2dca16ec72e68b34 161 Gene3D G3DSA:1.10.10.10 96 159 4.2E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_18740 29001daf969d929c2dca16ec72e68b34 161 Gene3D G3DSA:1.10.1740.10 3 82 4.3E-11 T 14-10-2018 AMIS_18740 29001daf969d929c2dca16ec72e68b34 161 Pfam PF08281 Sigma-70, region 4 103 151 4.6E-17 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_68820 f3ba8d33bbf6109d6db738d962ab5606 282 Gene3D G3DSA:1.10.10.10 199 282 1.8E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_68820 f3ba8d33bbf6109d6db738d962ab5606 282 Pfam PF04539 Sigma-70 region 3 128 201 1.5E-16 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 AMIS_68820 f3ba8d33bbf6109d6db738d962ab5606 282 Gene3D G3DSA:1.10.10.10 122 196 3.1E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_68820 f3ba8d33bbf6109d6db738d962ab5606 282 PIRSF PIRSF000770 29 276 3.8E-40 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMIS_68820 f3ba8d33bbf6109d6db738d962ab5606 282 Gene3D G3DSA:1.10.601.10 20 121 6.0E-52 T 14-10-2018 AMIS_68820 f3ba8d33bbf6109d6db738d962ab5606 282 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 73 86 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMIS_68820 f3ba8d33bbf6109d6db738d962ab5606 282 Pfam PF04542 Sigma-70 region 2 49 118 5.2E-23 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_68820 f3ba8d33bbf6109d6db738d962ab5606 282 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 242 268 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMIS_68820 f3ba8d33bbf6109d6db738d962ab5606 282 SUPERFAMILY SSF88659 181 277 2.43E-22 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_68820 f3ba8d33bbf6109d6db738d962ab5606 282 SUPERFAMILY SSF88659 122 193 8.72E-16 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_68820 f3ba8d33bbf6109d6db738d962ab5606 282 SUPERFAMILY SSF88946 1 119 9.87E-47 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_68820 f3ba8d33bbf6109d6db738d962ab5606 282 Pfam PF04545 Sigma-70, region 4 217 270 3.4E-17 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 AMIS_68820 f3ba8d33bbf6109d6db738d962ab5606 282 PRINTS PR00046 Major sigma-70 factor signature 221 233 1.4E-28 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMIS_68820 f3ba8d33bbf6109d6db738d962ab5606 282 PRINTS PR00046 Major sigma-70 factor signature 97 105 1.4E-28 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMIS_68820 f3ba8d33bbf6109d6db738d962ab5606 282 PRINTS PR00046 Major sigma-70 factor signature 242 257 1.4E-28 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMIS_68820 f3ba8d33bbf6109d6db738d962ab5606 282 PRINTS PR00046 Major sigma-70 factor signature 257 268 1.4E-28 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMIS_68820 f3ba8d33bbf6109d6db738d962ab5606 282 PRINTS PR00046 Major sigma-70 factor signature 73 86 1.4E-28 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMIS_68820 f3ba8d33bbf6109d6db738d962ab5606 282 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 45 270 5.9E-37 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_37670 d86f2cc00932767cbb12d9f991de489a 151 Gene3D G3DSA:3.40.50.12740 14 147 5.0E-31 T 14-10-2018 AMIS_37670 d86f2cc00932767cbb12d9f991de489a 151 Pfam PF00072 Response regulator receiver domain 16 125 3.4E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_37670 d86f2cc00932767cbb12d9f991de489a 151 SUPERFAMILY SSF52172 12 130 4.98E-31 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_37670 d86f2cc00932767cbb12d9f991de489a 151 SMART SM00448 13 125 3.2E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_60770 0c6da7cf9465f4c01f41d965b50558ad 329 Pfam PF04079 Segregation and condensation complex subunit ScpB 155 313 8.9E-53 T 14-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 AMIS_60770 0c6da7cf9465f4c01f41d965b50558ad 329 SUPERFAMILY SSF46785 231 304 7.62E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_60770 0c6da7cf9465f4c01f41d965b50558ad 329 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 152 322 4.5E-34 T 14-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 AMIS_60770 0c6da7cf9465f4c01f41d965b50558ad 329 Gene3D G3DSA:1.10.10.10 141 229 3.6E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_60770 0c6da7cf9465f4c01f41d965b50558ad 329 Gene3D G3DSA:1.10.10.10 230 324 1.0E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_60770 0c6da7cf9465f4c01f41d965b50558ad 329 SUPERFAMILY SSF46785 149 226 1.31E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_17880 115fc8de66fc14eb8767ca1177cc0bbf 889 SUPERFAMILY SSF46894 818 889 6.46E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_17880 115fc8de66fc14eb8767ca1177cc0bbf 889 SUPERFAMILY SSF52540 43 240 4.13E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_17880 115fc8de66fc14eb8767ca1177cc0bbf 889 Gene3D G3DSA:3.40.50.300 22 173 4.8E-7 T 14-10-2018 AMIS_17880 115fc8de66fc14eb8767ca1177cc0bbf 889 Gene3D G3DSA:1.25.40.10 484 800 1.6E-20 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_17880 115fc8de66fc14eb8767ca1177cc0bbf 889 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 859 871 4.6E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_17880 115fc8de66fc14eb8767ca1177cc0bbf 889 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 843 859 4.6E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_17880 115fc8de66fc14eb8767ca1177cc0bbf 889 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 829 843 4.6E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_17880 115fc8de66fc14eb8767ca1177cc0bbf 889 SMART SM00421 826 883 2.5E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_17880 115fc8de66fc14eb8767ca1177cc0bbf 889 Gene3D G3DSA:1.10.10.10 827 889 8.5E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_17880 115fc8de66fc14eb8767ca1177cc0bbf 889 Pfam PF00196 Bacterial regulatory proteins, luxR family 828 883 2.3E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_71930 8510db0486810863ef0b2967f4de5f4f 308 Pfam PF00231 ATP synthase 5 301 5.5E-89 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMIS_71930 8510db0486810863ef0b2967f4de5f4f 308 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 287 300 - T 14-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMIS_71930 8510db0486810863ef0b2967f4de5f4f 308 PRINTS PR00126 ATP synthase gamma subunit signature 74 93 9.9E-31 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMIS_71930 8510db0486810863ef0b2967f4de5f4f 308 PRINTS PR00126 ATP synthase gamma subunit signature 248 267 9.9E-31 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMIS_71930 8510db0486810863ef0b2967f4de5f4f 308 PRINTS PR00126 ATP synthase gamma subunit signature 180 197 9.9E-31 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMIS_71930 8510db0486810863ef0b2967f4de5f4f 308 PRINTS PR00126 ATP synthase gamma subunit signature 279 300 9.9E-31 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMIS_71930 8510db0486810863ef0b2967f4de5f4f 308 Hamap MF_00815 ATP synthase gamma chain [atpG]. 2 301 34.179 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMIS_71930 8510db0486810863ef0b2967f4de5f4f 308 SUPERFAMILY SSF52943 5 301 1.18E-79 T 14-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMIS_71930 8510db0486810863ef0b2967f4de5f4f 308 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 4 301 1.6E-99 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMIS_71930 8510db0486810863ef0b2967f4de5f4f 308 Gene3D G3DSA:3.40.1380.10 61 220 8.4E-91 T 14-10-2018 AMIS_71930 8510db0486810863ef0b2967f4de5f4f 308 Gene3D G3DSA:1.10.287.80 8 297 8.4E-91 T 14-10-2018 AMIS_29120 41ca0a4877e308af3d54d7f415851a7a 436 Pfam PF13796 Putative sensor 11 190 1.2E-36 T 14-10-2018 IPR025828 Putative sensor domain AMIS_29120 41ca0a4877e308af3d54d7f415851a7a 436 SUPERFAMILY SSF55874 315 433 3.17E-13 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_29120 41ca0a4877e308af3d54d7f415851a7a 436 Gene3D G3DSA:3.30.565.10 311 435 2.2E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_29120 41ca0a4877e308af3d54d7f415851a7a 436 Pfam PF07730 Histidine kinase 219 309 2.3E-7 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMIS_29120 41ca0a4877e308af3d54d7f415851a7a 436 SMART SM00387 343 436 3.9E-4 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_39540 1caa66a055d4a2924159009a8bde0f62 326 Gene3D G3DSA:3.90.226.40 1 321 1.7E-111 T 14-10-2018 AMIS_39540 1caa66a055d4a2924159009a8bde0f62 326 SUPERFAMILY SSF52096 2 310 4.56E-62 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMIS_39540 1caa66a055d4a2924159009a8bde0f62 326 Pfam PF16113 Enoyl-CoA hydratase/isomerase 15 318 9.9E-107 T 14-10-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 AMIS_46540 9f1a3c409f58db4a2d6365ab0cc0c411 491 SUPERFAMILY SSF51556 15 473 1.16E-136 T 14-10-2018 IPR032466 Metal-dependent hydrolase AMIS_46540 9f1a3c409f58db4a2d6365ab0cc0c411 491 Pfam PF02614 Glucuronate isomerase 32 458 1.6E-67 T 14-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 AMIS_46540 9f1a3c409f58db4a2d6365ab0cc0c411 491 Gene3D G3DSA:1.10.2020.10 61 161 1.5E-123 T 14-10-2018 AMIS_46540 9f1a3c409f58db4a2d6365ab0cc0c411 491 Gene3D G3DSA:3.20.20.140 31 461 1.5E-123 T 14-10-2018 AMIS_10860 b1051205a894d0a770f44bd19fb84f76 354 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 205 218 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 AMIS_10860 b1051205a894d0a770f44bd19fb84f76 354 Gene3D G3DSA:3.40.640.10 33 253 3.1E-72 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_10860 b1051205a894d0a770f44bd19fb84f76 354 Gene3D G3DSA:3.90.1150.10 21 346 3.1E-72 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMIS_10860 b1051205a894d0a770f44bd19fb84f76 354 Pfam PF00155 Aminotransferase class I and II 42 344 7.6E-31 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMIS_10860 b1051205a894d0a770f44bd19fb84f76 354 SUPERFAMILY SSF53383 18 349 3.34E-55 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_34830 747fe260f984912340f7f276ae023949 211 Gene3D G3DSA:1.10.357.10 9 203 2.9E-19 T 14-10-2018 AMIS_34830 747fe260f984912340f7f276ae023949 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 1.1E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_34830 747fe260f984912340f7f276ae023949 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 1.1E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_34830 747fe260f984912340f7f276ae023949 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 65 1.2E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_34830 747fe260f984912340f7f276ae023949 211 SUPERFAMILY SSF46689 11 83 8.21E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_67530 9bae887c54cc0384369ba60ea74b1687 520 Pfam PF00553 Cellulose binding domain 39 133 9.2E-25 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 AMIS_67530 9bae887c54cc0384369ba60ea74b1687 520 SUPERFAMILY SSF49384 33 133 6.98E-28 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 AMIS_67530 9bae887c54cc0384369ba60ea74b1687 520 Gene3D G3DSA:2.60.110.10 167 500 2.5E-105 T 14-10-2018 IPR037176 Osmotin/thaumatin-like superfamily AMIS_67530 9bae887c54cc0384369ba60ea74b1687 520 Gene3D G3DSA:2.60.40.290 35 136 3.9E-29 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 AMIS_67530 9bae887c54cc0384369ba60ea74b1687 520 Gene3D G3DSA:3.30.920.50 360 474 2.5E-105 T 14-10-2018 AMIS_67530 9bae887c54cc0384369ba60ea74b1687 520 Pfam PF16483 Beta-1,3-glucanase 161 517 1.1E-94 T 14-10-2018 IPR032477 Beta-1,3-glucanase, N-terminal KEGG: 00500+3.2.1.39 AMIS_67530 9bae887c54cc0384369ba60ea74b1687 520 SMART SM00637 37 133 3.1E-29 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 AMIS_55430 619bce597ae0d55e40dcfdd1b673b09e 333 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 1 328 2.4E-77 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family AMIS_55430 619bce597ae0d55e40dcfdd1b673b09e 333 Pfam PF16868 NMT1-like family 47 328 2.2E-67 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family AMIS_55430 619bce597ae0d55e40dcfdd1b673b09e 333 Gene3D G3DSA:3.40.190.10 129 267 4.7E-77 T 14-10-2018 AMIS_55430 619bce597ae0d55e40dcfdd1b673b09e 333 Gene3D G3DSA:3.40.190.10 47 328 4.7E-77 T 14-10-2018 AMIS_55430 619bce597ae0d55e40dcfdd1b673b09e 333 SUPERFAMILY SSF53850 43 331 3.04E-55 T 14-10-2018 AMIS_49120 72a479a650f8fea78f9feddcde36467f 436 SUPERFAMILY SSF51055 39 83 1.15E-11 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AMIS_49120 72a479a650f8fea78f9feddcde36467f 436 Gene3D G3DSA:2.10.10.20 36 87 1.6E-16 T 14-10-2018 AMIS_49120 72a479a650f8fea78f9feddcde36467f 436 SUPERFAMILY SSF51445 130 426 2.0E-39 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_49120 72a479a650f8fea78f9feddcde36467f 436 Pfam PF00704 Glycosyl hydrolases family 18 133 419 6.0E-18 T 14-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 AMIS_49120 72a479a650f8fea78f9feddcde36467f 436 ProSitePatterns PS01095 Chitinases family 18 active site. 245 253 - T 14-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AMIS_49120 72a479a650f8fea78f9feddcde36467f 436 SMART SM00495 36 84 7.5E-11 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AMIS_49120 72a479a650f8fea78f9feddcde36467f 436 Gene3D G3DSA:3.20.20.80 129 434 1.1E-55 T 14-10-2018 AMIS_57830 e51ba51a24bb3d8b5f85b0c2dab39555 292 Gene3D G3DSA:3.30.43.10 3 55 2.9E-21 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 AMIS_57830 e51ba51a24bb3d8b5f85b0c2dab39555 292 SUPERFAMILY SSF56176 3 177 1.14E-49 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AMIS_57830 e51ba51a24bb3d8b5f85b0c2dab39555 292 Gene3D G3DSA:3.30.465.10 62 177 6.7E-36 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AMIS_57830 e51ba51a24bb3d8b5f85b0c2dab39555 292 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 6 177 5.7E-44 T 14-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 AMIS_57830 e51ba51a24bb3d8b5f85b0c2dab39555 292 SMART SM01092 184 286 9.4E-26 T 14-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal AMIS_57830 e51ba51a24bb3d8b5f85b0c2dab39555 292 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 184 285 3.9E-21 T 14-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal AMIS_57830 e51ba51a24bb3d8b5f85b0c2dab39555 292 SUPERFAMILY SSF55447 183 288 9.42E-24 T 14-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily AMIS_57830 e51ba51a24bb3d8b5f85b0c2dab39555 292 Gene3D G3DSA:3.30.390.50 183 292 1.5E-28 T 14-10-2018 AMIS_3560 ebfa18708148f81a811f3da18a1658e9 317 PIRSF PIRSF006493 1 316 6.0E-95 T 14-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type AMIS_3560 ebfa18708148f81a811f3da18a1658e9 317 Gene3D G3DSA:2.40.290.10 2 180 5.7E-20 T 14-10-2018 IPR016194 SPOC-like, C-terminal domain superfamily AMIS_3560 ebfa18708148f81a811f3da18a1658e9 317 Hamap MF_01875 Non-homologous end joining protein Ku [ku]. 1 253 33.239 T 14-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type AMIS_3560 ebfa18708148f81a811f3da18a1658e9 317 TIGRFAM TIGR02772 Ku_bact: Ku protein 1 255 8.0E-92 T 14-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type AMIS_3560 ebfa18708148f81a811f3da18a1658e9 317 SUPERFAMILY SSF100939 1 254 1.53E-59 T 14-10-2018 IPR016194 SPOC-like, C-terminal domain superfamily AMIS_3560 ebfa18708148f81a811f3da18a1658e9 317 Pfam PF02735 Ku70/Ku80 beta-barrel domain 11 179 3.6E-41 T 14-10-2018 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: R-HSA-164843|Reactome: R-HSA-1834949|Reactome: R-HSA-3270619|Reactome: R-HSA-5693571|Reactome: R-HSA-6798695 AMIS_3560 ebfa18708148f81a811f3da18a1658e9 317 SMART SM00559 52 180 2.5E-35 T 14-10-2018 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: R-HSA-164843|Reactome: R-HSA-1834949|Reactome: R-HSA-3270619|Reactome: R-HSA-5693571|Reactome: R-HSA-6798695 AMIS_50580 82fd4b40fa1c6849bc1e085ce7d4ca05 452 Pfam PF03559 NDP-hexose 2,3-dehydratase 242 442 5.3E-76 T 14-10-2018 IPR005212 NDP-hexose 2,3-dehydratase KEGG: 00523+4.2.1.159 AMIS_50580 82fd4b40fa1c6849bc1e085ce7d4ca05 452 Pfam PF03559 NDP-hexose 2,3-dehydratase 8 207 5.0E-82 T 14-10-2018 IPR005212 NDP-hexose 2,3-dehydratase KEGG: 00523+4.2.1.159 AMIS_50580 82fd4b40fa1c6849bc1e085ce7d4ca05 452 Gene3D G3DSA:3.90.79.40 289 451 3.1E-52 T 14-10-2018 IPR038153 NDP-hexose 2,3-dehydratase-like superfamily KEGG: 00523+4.2.1.159 AMIS_50580 82fd4b40fa1c6849bc1e085ce7d4ca05 452 Gene3D G3DSA:3.90.79.40 59 213 5.2E-56 T 14-10-2018 IPR038153 NDP-hexose 2,3-dehydratase-like superfamily KEGG: 00523+4.2.1.159 AMIS_61390 1a975694ed3d8f8dfc83057eb5561f89 182 SUPERFAMILY SSF109854 7 179 3.01E-15 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes AMIS_61390 1a975694ed3d8f8dfc83057eb5561f89 182 Pfam PF12867 DinB superfamily 71 172 1.2E-13 T 14-10-2018 IPR024775 DinB-like domain AMIS_22250 adc06bbd7c0c1d6ed74fda707c800bff 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 1.8E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_22250 adc06bbd7c0c1d6ed74fda707c800bff 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 1.8E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_22250 adc06bbd7c0c1d6ed74fda707c800bff 202 Gene3D G3DSA:1.10.357.10 10 186 1.2E-30 T 14-10-2018 AMIS_22250 adc06bbd7c0c1d6ed74fda707c800bff 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 2.9E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_22250 adc06bbd7c0c1d6ed74fda707c800bff 202 SUPERFAMILY SSF46689 3 84 3.49E-20 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_32100 1383b860a01d5c43d2223f09f1fa32c3 400 Pfam PF00155 Aminotransferase class I and II 108 385 2.5E-31 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMIS_32100 1383b860a01d5c43d2223f09f1fa32c3 400 Gene3D G3DSA:3.40.640.10 71 295 7.8E-113 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_32100 1383b860a01d5c43d2223f09f1fa32c3 400 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 242 255 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 AMIS_32100 1383b860a01d5c43d2223f09f1fa32c3 400 SUPERFAMILY SSF53383 31 393 5.05E-85 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_32100 1383b860a01d5c43d2223f09f1fa32c3 400 Gene3D G3DSA:3.90.1150.10 31 389 7.8E-113 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMIS_26270 ca58b3d213ee8662bbf598ac6108ffd6 1195 Pfam PF00759 Glycosyl hydrolase family 9 141 635 1.3E-59 T 14-10-2018 IPR001701 Glycoside hydrolase family 9 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AMIS_26270 ca58b3d213ee8662bbf598ac6108ffd6 1195 Gene3D G3DSA:3.20.20.40 910 1194 2.6E-86 T 14-10-2018 IPR036434 1, 4-beta cellobiohydrolase superfamily GO:0004553|GO:0030245 AMIS_26270 ca58b3d213ee8662bbf598ac6108ffd6 1195 ProSitePatterns PS00655 Glycosyl hydrolases family 6 signature 1. 978 994 - T 14-10-2018 IPR001524 Glycoside hydrolase, family 6, conserved site GO:0004553|GO:0005975 AMIS_26270 ca58b3d213ee8662bbf598ac6108ffd6 1195 PRINTS PR00733 Glycosyl hydrolase family 6 signature 1084 1094 3.9E-29 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 AMIS_26270 ca58b3d213ee8662bbf598ac6108ffd6 1195 PRINTS PR00733 Glycosyl hydrolase family 6 signature 1001 1016 3.9E-29 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 AMIS_26270 ca58b3d213ee8662bbf598ac6108ffd6 1195 PRINTS PR00733 Glycosyl hydrolase family 6 signature 931 950 3.9E-29 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 AMIS_26270 ca58b3d213ee8662bbf598ac6108ffd6 1195 PRINTS PR00733 Glycosyl hydrolase family 6 signature 973 986 3.9E-29 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 AMIS_26270 ca58b3d213ee8662bbf598ac6108ffd6 1195 PRINTS PR00733 Glycosyl hydrolase family 6 signature 1054 1067 3.9E-29 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 AMIS_26270 ca58b3d213ee8662bbf598ac6108ffd6 1195 PRINTS PR00733 Glycosyl hydrolase family 6 signature 1156 1170 3.9E-29 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 AMIS_26270 ca58b3d213ee8662bbf598ac6108ffd6 1195 PRINTS PR00733 Glycosyl hydrolase family 6 signature 1134 1154 3.9E-29 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 AMIS_26270 ca58b3d213ee8662bbf598ac6108ffd6 1195 PRINTS PR00733 Glycosyl hydrolase family 6 signature 1119 1132 3.9E-29 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 AMIS_26270 ca58b3d213ee8662bbf598ac6108ffd6 1195 SUPERFAMILY SSF69318 672 872 2.09E-10 T 14-10-2018 AMIS_26270 ca58b3d213ee8662bbf598ac6108ffd6 1195 Pfam PF01341 Glycosyl hydrolases family 6 931 1175 2.0E-61 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 AMIS_26270 ca58b3d213ee8662bbf598ac6108ffd6 1195 SUPERFAMILY SSF48208 139 643 2.49E-47 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AMIS_26270 ca58b3d213ee8662bbf598ac6108ffd6 1195 Gene3D G3DSA:1.50.10.10 141 651 2.2E-48 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 AMIS_26270 ca58b3d213ee8662bbf598ac6108ffd6 1195 SUPERFAMILY SSF51989 912 1192 7.46E-72 T 14-10-2018 IPR036434 1, 4-beta cellobiohydrolase superfamily GO:0004553|GO:0030245 AMIS_26270 ca58b3d213ee8662bbf598ac6108ffd6 1195 Pfam PF02927 Cellulase N-terminal ig-like domain 45 127 7.5E-20 T 14-10-2018 IPR004197 Cellulase, Ig-like domain GO:0005975|GO:0008810 AMIS_26270 ca58b3d213ee8662bbf598ac6108ffd6 1195 Gene3D G3DSA:2.60.40.10 39 135 2.9E-19 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_26270 ca58b3d213ee8662bbf598ac6108ffd6 1195 SUPERFAMILY SSF81296 40 134 2.52E-16 T 14-10-2018 IPR014756 Immunoglobulin E-set AMIS_25910 df847480f8eab84f478d767ffa6ae64c 916 Gene3D G3DSA:3.40.50.300 2 169 1.0E-5 T 14-10-2018 AMIS_25910 df847480f8eab84f478d767ffa6ae64c 916 Gene3D G3DSA:1.10.10.10 848 912 6.8E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_25910 df847480f8eab84f478d767ffa6ae64c 916 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 866 882 3.2E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_25910 df847480f8eab84f478d767ffa6ae64c 916 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 852 866 3.2E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_25910 df847480f8eab84f478d767ffa6ae64c 916 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 882 894 3.2E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_25910 df847480f8eab84f478d767ffa6ae64c 916 SUPERFAMILY SSF52540 8 159 2.84E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_25910 df847480f8eab84f478d767ffa6ae64c 916 SMART SM00421 849 906 2.0E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_25910 df847480f8eab84f478d767ffa6ae64c 916 Pfam PF13191 AAA ATPase domain 10 164 4.3E-19 T 14-10-2018 AMIS_25910 df847480f8eab84f478d767ffa6ae64c 916 Gene3D G3DSA:1.25.40.10 525 834 2.2E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_25910 df847480f8eab84f478d767ffa6ae64c 916 SUPERFAMILY SSF46894 843 906 5.78E-15 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_25910 df847480f8eab84f478d767ffa6ae64c 916 Pfam PF00196 Bacterial regulatory proteins, luxR family 852 905 9.1E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_14530 e08454ab5154b4416adde787d570c447 495 ProSitePatterns PS00216 Sugar transport proteins signature 1. 78 94 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AMIS_14530 e08454ab5154b4416adde787d570c447 495 Gene3D G3DSA:1.20.1250.20 282 480 7.2E-18 T 14-10-2018 AMIS_14530 e08454ab5154b4416adde787d570c447 495 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 25 430 2.4E-84 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 AMIS_14530 e08454ab5154b4416adde787d570c447 495 SUPERFAMILY SSF103473 9 479 4.32E-67 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_14530 e08454ab5154b4416adde787d570c447 495 Pfam PF07690 Major Facilitator Superfamily 28 422 5.2E-53 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_14530 e08454ab5154b4416adde787d570c447 495 Gene3D G3DSA:1.20.1720.10 24 212 3.6E-48 T 14-10-2018 AMIS_14530 e08454ab5154b4416adde787d570c447 495 PRINTS PR01036 Tetracycline resistance protein TetB signature 149 173 1.3E-6 T 14-10-2018 AMIS_14530 e08454ab5154b4416adde787d570c447 495 PRINTS PR01036 Tetracycline resistance protein TetB signature 27 51 1.3E-6 T 14-10-2018 AMIS_14530 e08454ab5154b4416adde787d570c447 495 PRINTS PR01036 Tetracycline resistance protein TetB signature 87 109 1.3E-6 T 14-10-2018 AMIS_14730 fb5a1ee6a036ffe978462228579157c9 297 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 11 287 6.0E-54 T 14-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 AMIS_14730 fb5a1ee6a036ffe978462228579157c9 297 SUPERFAMILY SSF51658 11 287 9.56E-65 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily AMIS_14730 fb5a1ee6a036ffe978462228579157c9 297 Hamap MF_00152 Probable endonuclease 4 [nfo]. 10 290 34.002 T 14-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 AMIS_14730 fb5a1ee6a036ffe978462228579157c9 297 Pfam PF01261 Xylose isomerase-like TIM barrel 33 248 2.5E-26 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AMIS_14730 fb5a1ee6a036ffe978462228579157c9 297 SMART SM00518 11 290 5.8E-65 T 14-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 AMIS_14730 fb5a1ee6a036ffe978462228579157c9 297 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 224 240 - T 14-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 AMIS_14730 fb5a1ee6a036ffe978462228579157c9 297 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 184 191 - T 14-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 AMIS_14730 fb5a1ee6a036ffe978462228579157c9 297 Gene3D G3DSA:3.20.20.150 10 294 3.8E-70 T 14-10-2018 AMIS_52540 01a16f0e153cd0f643febcf6878f48ed 301 Gene3D G3DSA:1.10.10.10 1 83 1.3E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_52540 01a16f0e153cd0f643febcf6878f48ed 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 7.6E-21 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_52540 01a16f0e153cd0f643febcf6878f48ed 301 Gene3D G3DSA:3.40.190.10 169 268 4.3E-42 T 14-10-2018 AMIS_52540 01a16f0e153cd0f643febcf6878f48ed 301 SUPERFAMILY SSF46785 1 112 1.36E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_52540 01a16f0e153cd0f643febcf6878f48ed 301 SUPERFAMILY SSF53850 93 297 5.9E-38 T 14-10-2018 AMIS_52540 01a16f0e153cd0f643febcf6878f48ed 301 Gene3D G3DSA:3.40.190.10 93 278 4.3E-42 T 14-10-2018 AMIS_52540 01a16f0e153cd0f643febcf6878f48ed 301 Pfam PF03466 LysR substrate binding domain 90 293 1.8E-40 T 14-10-2018 IPR005119 LysR, substrate-binding AMIS_51780 8d7dc79dd4684ed710f3af36fb8c8379 318 Pfam PF12680 SnoaL-like domain 202 297 1.9E-6 T 14-10-2018 IPR037401 SnoaL-like domain AMIS_51780 8d7dc79dd4684ed710f3af36fb8c8379 318 Gene3D G3DSA:1.10.10.10 122 184 2.0E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_51780 8d7dc79dd4684ed710f3af36fb8c8379 318 Pfam PF04542 Sigma-70 region 2 9 74 1.1E-18 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_51780 8d7dc79dd4684ed710f3af36fb8c8379 318 Gene3D G3DSA:1.10.1740.10 6 91 3.7E-20 T 14-10-2018 AMIS_51780 8d7dc79dd4684ed710f3af36fb8c8379 318 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 8 180 2.1E-23 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_51780 8d7dc79dd4684ed710f3af36fb8c8379 318 TIGRFAM TIGR02960 SigX5: RNA polymerase sigma-70 factor, TIGR02960 family 2 313 8.1E-120 T 14-10-2018 IPR014305 RNA polymerase sigma-G type, actinobacteria AMIS_51780 8d7dc79dd4684ed710f3af36fb8c8379 318 Gene3D G3DSA:3.10.450.50 194 308 4.5E-13 T 14-10-2018 AMIS_51780 8d7dc79dd4684ed710f3af36fb8c8379 318 SUPERFAMILY SSF88946 8 80 2.63E-21 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_51780 8d7dc79dd4684ed710f3af36fb8c8379 318 Pfam PF08281 Sigma-70, region 4 128 179 1.8E-14 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_51780 8d7dc79dd4684ed710f3af36fb8c8379 318 SUPERFAMILY SSF88659 122 181 1.2E-11 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_51780 8d7dc79dd4684ed710f3af36fb8c8379 318 SUPERFAMILY SSF54427 196 309 5.24E-18 T 14-10-2018 IPR032710 NTF2-like domain superfamily AMIS_10 40ec0956de25463b2a3bde57d1726683 593 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 320 334 2.6E-51 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AMIS_10 40ec0956de25463b2a3bde57d1726683 593 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 288 308 2.6E-51 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AMIS_10 40ec0956de25463b2a3bde57d1726683 593 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 386 413 2.6E-51 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AMIS_10 40ec0956de25463b2a3bde57d1726683 593 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 352 366 2.6E-51 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AMIS_10 40ec0956de25463b2a3bde57d1726683 593 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 549 568 2.6E-51 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AMIS_10 40ec0956de25463b2a3bde57d1726683 593 Pfam PF00308 Bacterial dnaA protein 255 472 5.5E-99 T 14-10-2018 IPR013317 Chromosomal replication initiator protein DnaA AMIS_10 40ec0956de25463b2a3bde57d1726683 593 Gene3D G3DSA:3.40.50.300 250 419 1.6E-51 T 14-10-2018 AMIS_10 40ec0956de25463b2a3bde57d1726683 593 SMART SM00382 287 415 1.8E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_10 40ec0956de25463b2a3bde57d1726683 593 SUPERFAMILY SSF52540 254 466 7.04E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_10 40ec0956de25463b2a3bde57d1726683 593 Gene3D G3DSA:3.30.300.180 4 84 7.7E-10 T 14-10-2018 IPR038454 DnaA, N-terminal domain superfamily AMIS_10 40ec0956de25463b2a3bde57d1726683 593 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 11 589 1.0E-157 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AMIS_10 40ec0956de25463b2a3bde57d1726683 593 Gene3D G3DSA:1.10.1750.10 495 593 1.4E-36 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AMIS_10 40ec0956de25463b2a3bde57d1726683 593 Gene3D G3DSA:1.10.8.60 421 491 6.8E-26 T 14-10-2018 AMIS_10 40ec0956de25463b2a3bde57d1726683 593 SMART SM00760 499 568 1.7E-37 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AMIS_10 40ec0956de25463b2a3bde57d1726683 593 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 501 568 8.1E-30 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AMIS_10 40ec0956de25463b2a3bde57d1726683 593 ProSitePatterns PS01008 DnaA protein signature. 549 568 - T 14-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AMIS_10 40ec0956de25463b2a3bde57d1726683 593 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 8 590 33.004 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AMIS_10 40ec0956de25463b2a3bde57d1726683 593 SUPERFAMILY SSF48295 486 591 9.68E-35 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AMIS_22270 084a02cb6919305278d4d5eb185b03f0 326 SMART SM00421 263 320 3.7E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_22270 084a02cb6919305278d4d5eb185b03f0 326 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 296 308 3.4E-5 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_22270 084a02cb6919305278d4d5eb185b03f0 326 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 280 296 3.4E-5 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_22270 084a02cb6919305278d4d5eb185b03f0 326 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 266 280 3.4E-5 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_22270 084a02cb6919305278d4d5eb185b03f0 326 SUPERFAMILY SSF46894 253 326 4.76E-13 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_22270 084a02cb6919305278d4d5eb185b03f0 326 Pfam PF00196 Bacterial regulatory proteins, luxR family 266 316 2.1E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_22270 084a02cb6919305278d4d5eb185b03f0 326 Gene3D G3DSA:1.10.10.10 1 93 2.7E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_22270 084a02cb6919305278d4d5eb185b03f0 326 Gene3D G3DSA:1.10.10.10 214 325 5.7E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_64610 8d11dbeb6614ee5293c8e47aa613ba51 353 SUPERFAMILY SSF52540 51 333 6.21E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_64610 8d11dbeb6614ee5293c8e47aa613ba51 353 Gene3D G3DSA:3.40.50.300 53 230 5.9E-23 T 14-10-2018 AMIS_64610 8d11dbeb6614ee5293c8e47aa613ba51 353 Pfam PF07728 AAA domain (dynein-related subfamily) 73 211 6.5E-39 T 14-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 AMIS_60120 88794f4df516a95716c5d530e136fba8 1297 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 772 800 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AMIS_60120 88794f4df516a95716c5d530e136fba8 1297 SUPERFAMILY SSF51161 888 1051 1.15E-10 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily AMIS_60120 88794f4df516a95716c5d530e136fba8 1297 SUPERFAMILY SSF51161 1173 1287 5.82E-18 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily AMIS_60120 88794f4df516a95716c5d530e136fba8 1297 ProSitePatterns PS00012 Phosphopantetheine attachment site. 543 558 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site AMIS_60120 88794f4df516a95716c5d530e136fba8 1297 Gene3D G3DSA:2.160.10.10 697 820 4.5E-15 T 14-10-2018 AMIS_60120 88794f4df516a95716c5d530e136fba8 1297 Pfam PF00501 AMP-binding enzyme 42 412 2.7E-63 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMIS_60120 88794f4df516a95716c5d530e136fba8 1297 Pfam PF00550 Phosphopantetheine attachment site 520 583 9.5E-10 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain AMIS_60120 88794f4df516a95716c5d530e136fba8 1297 SUPERFAMILY SSF51161 715 814 1.52E-19 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily AMIS_60120 88794f4df516a95716c5d530e136fba8 1297 ProSitePatterns PS00455 Putative AMP-binding domain signature. 165 176 - T 14-10-2018 IPR020845 AMP-binding, conserved site AMIS_60120 88794f4df516a95716c5d530e136fba8 1297 SMART SM00823 Phosphopantetheine attachment site 519 587 0.0067 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AMIS_60120 88794f4df516a95716c5d530e136fba8 1297 Gene3D G3DSA:3.40.50.12780 28 407 1.2E-91 T 14-10-2018 AMIS_60120 88794f4df516a95716c5d530e136fba8 1297 Gene3D G3DSA:2.160.10.10 1187 1293 1.7E-11 T 14-10-2018 AMIS_60120 88794f4df516a95716c5d530e136fba8 1297 SUPERFAMILY SSF56801 31 532 9.81E-107 T 14-10-2018 AMIS_60120 88794f4df516a95716c5d530e136fba8 1297 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 764 798 4.9E-7 T 14-10-2018 IPR001451 Hexapeptide repeat AMIS_60120 88794f4df516a95716c5d530e136fba8 1297 Gene3D G3DSA:3.30.300.30 408 515 3.7E-22 T 14-10-2018 AMIS_60120 88794f4df516a95716c5d530e136fba8 1297 Gene3D G3DSA:1.10.1200.10 517 591 5.2E-14 T 14-10-2018 IPR036736 ACP-like superfamily AMIS_60120 88794f4df516a95716c5d530e136fba8 1297 SUPERFAMILY SSF47336 515 583 1.92E-11 T 14-10-2018 IPR036736 ACP-like superfamily AMIS_60120 88794f4df516a95716c5d530e136fba8 1297 TIGRFAM TIGR02353 NRPS_term_dom: non-ribosomal peptide synthetase terminal domain of unknown function 606 1286 7.2E-213 T 14-10-2018 IPR012728 Non-ribosomal peptide synthetase, C-terminal AMIS_60120 88794f4df516a95716c5d530e136fba8 1297 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 62 436 7.7E-96 T 14-10-2018 IPR010071 Amino acid adenylation domain AMIS_70910 1e08cece269d4ae6d2f1c0b40e5b9e05 778 SUPERFAMILY SSF56024 406 590 1.32E-57 T 14-10-2018 AMIS_70910 1e08cece269d4ae6d2f1c0b40e5b9e05 778 SUPERFAMILY SSF140356 94 198 1.27E-33 T 14-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 AMIS_70910 1e08cece269d4ae6d2f1c0b40e5b9e05 778 Gene3D G3DSA:3.30.1840.10 92 400 1.3E-111 T 14-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 AMIS_70910 1e08cece269d4ae6d2f1c0b40e5b9e05 778 Gene3D G3DSA:3.30.870.10 407 592 8.9E-75 T 14-10-2018 AMIS_70910 1e08cece269d4ae6d2f1c0b40e5b9e05 778 Pfam PF02503 Polyphosphate kinase middle domain 213 411 5.9E-69 T 14-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 AMIS_70910 1e08cece269d4ae6d2f1c0b40e5b9e05 778 Gene3D G3DSA:3.30.870.10 593 777 3.3E-61 T 14-10-2018 AMIS_70910 1e08cece269d4ae6d2f1c0b40e5b9e05 778 SUPERFAMILY SSF143724 200 401 5.3E-64 T 14-10-2018 AMIS_70910 1e08cece269d4ae6d2f1c0b40e5b9e05 778 PIRSF PIRSF015589 74 778 3.3E-275 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AMIS_70910 1e08cece269d4ae6d2f1c0b40e5b9e05 778 Pfam PF13089 Polyphosphate kinase N-terminal domain 97 202 6.3E-34 T 14-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 AMIS_70910 1e08cece269d4ae6d2f1c0b40e5b9e05 778 SUPERFAMILY SSF56024 593 773 7.18E-63 T 14-10-2018 AMIS_70910 1e08cece269d4ae6d2f1c0b40e5b9e05 778 Hamap MF_00347 Polyphosphate kinase [ppk]. 94 775 28.782 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AMIS_70910 1e08cece269d4ae6d2f1c0b40e5b9e05 778 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 96 770 9.3E-250 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AMIS_70910 1e08cece269d4ae6d2f1c0b40e5b9e05 778 Pfam PF13090 Polyphosphate kinase C-terminal domain 422 770 1.2E-151 T 14-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 AMIS_10180 7d1ef2798d88a2093cbe2ca42a6fbe88 168 SUPERFAMILY SSF55729 3 159 8.75E-26 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_10180 7d1ef2798d88a2093cbe2ca42a6fbe88 168 Pfam PF00583 Acetyltransferase (GNAT) family 62 142 9.9E-13 T 14-10-2018 IPR000182 GNAT domain AMIS_10180 7d1ef2798d88a2093cbe2ca42a6fbe88 168 Gene3D G3DSA:3.40.630.30 3 162 2.7E-28 T 14-10-2018 AMIS_42660 28957ae8cc0857c87c9a2117329c68ea 219 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 18 33 - T 14-10-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 AMIS_42660 28957ae8cc0857c87c9a2117329c68ea 219 SUPERFAMILY SSF100950 8 218 1.73E-75 T 14-10-2018 IPR037171 NagB/RpiA transferase-like AMIS_42660 28957ae8cc0857c87c9a2117329c68ea 219 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 5 219 2.4E-101 T 14-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 AMIS_42660 28957ae8cc0857c87c9a2117329c68ea 219 Gene3D G3DSA:3.40.1080.10 2 218 8.2E-80 T 14-10-2018 AMIS_42660 28957ae8cc0857c87c9a2117329c68ea 219 Pfam PF01144 Coenzyme A transferase 8 218 4.3E-68 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 AMIS_42660 28957ae8cc0857c87c9a2117329c68ea 219 SMART SM00882 6 219 3.0E-79 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 AMIS_25030 b54dd132e135578994094bf883f722e0 778 Gene3D G3DSA:3.30.565.10 457 625 6.3E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_25030 b54dd132e135578994094bf883f722e0 778 SUPERFAMILY SSF55874 447 620 6.42E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_25030 b54dd132e135578994094bf883f722e0 778 Gene3D G3DSA:1.10.287.130 376 454 6.0E-18 T 14-10-2018 AMIS_25030 b54dd132e135578994094bf883f722e0 778 SMART SM00304 310 363 0.0013 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_25030 b54dd132e135578994094bf883f722e0 778 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 498 618 4.4E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_25030 b54dd132e135578994094bf883f722e0 778 Pfam PF00512 His Kinase A (phospho-acceptor) domain 384 454 4.8E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_25030 b54dd132e135578994094bf883f722e0 778 SMART SM00448 644 757 3.5E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_25030 b54dd132e135578994094bf883f722e0 778 SMART SM00387 497 620 1.2E-33 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_25030 b54dd132e135578994094bf883f722e0 778 Pfam PF00072 Response regulator receiver domain 646 757 2.5E-17 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_25030 b54dd132e135578994094bf883f722e0 778 SUPERFAMILY SSF47384 379 454 1.14E-8 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_25030 b54dd132e135578994094bf883f722e0 778 Pfam PF05228 CHASE4 domain 69 220 1.7E-11 T 14-10-2018 IPR007892 CHASE4 AMIS_25030 b54dd132e135578994094bf883f722e0 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 604 617 2.2E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_25030 b54dd132e135578994094bf883f722e0 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 580 598 2.2E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_25030 b54dd132e135578994094bf883f722e0 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 549 563 2.2E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_25030 b54dd132e135578994094bf883f722e0 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 567 577 2.2E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_25030 b54dd132e135578994094bf883f722e0 778 SUPERFAMILY SSF52172 644 764 2.42E-27 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_25030 b54dd132e135578994094bf883f722e0 778 Gene3D G3DSA:3.40.50.2300 642 768 5.1E-26 T 14-10-2018 AMIS_25030 b54dd132e135578994094bf883f722e0 778 SMART SM00388 383 456 3.9E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_73400 4d39b6e66d6149f496f1724687069626 136 Gene3D G3DSA:1.10.10.10 2 136 2.8E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_73400 4d39b6e66d6149f496f1724687069626 136 SUPERFAMILY SSF46785 4 130 2.56E-28 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_73400 4d39b6e66d6149f496f1724687069626 136 Pfam PF02082 Transcriptional regulator 3 81 2.6E-23 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type AMIS_73400 4d39b6e66d6149f496f1724687069626 136 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 48 66 - T 14-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site AMIS_73400 4d39b6e66d6149f496f1724687069626 136 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 3 129 2.8E-31 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type AMIS_73660 c93e9a57476eb6a3087d4e96e0dedb01 317 Pfam PF00583 Acetyltransferase (GNAT) family 235 306 2.6E-11 T 14-10-2018 IPR000182 GNAT domain AMIS_73660 c93e9a57476eb6a3087d4e96e0dedb01 317 Gene3D G3DSA:3.40.630.30 80 316 7.8E-30 T 14-10-2018 AMIS_73660 c93e9a57476eb6a3087d4e96e0dedb01 317 SUPERFAMILY SSF55729 73 312 1.6E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_57630 5b9d20aa3421df691ac3172c16e3c9df 298 Gene3D G3DSA:2.80.10.50 156 295 4.0E-37 T 14-10-2018 AMIS_57630 5b9d20aa3421df691ac3172c16e3c9df 298 Pfam PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain 172 289 6.1E-31 T 14-10-2018 IPR007934 Alpha-L-arabinofuranosidase B, arabinose-binding domain GO:0046373|GO:0046556 AMIS_57630 5b9d20aa3421df691ac3172c16e3c9df 298 SUPERFAMILY SSF110221 163 288 4.97E-29 T 14-10-2018 IPR036195 Alpha-L-arabinofuranosidase B, arabinose-binding domain superfamily GO:0046373|GO:0046556 AMIS_46800 3187ad486030c8ef0310f5d516ea2962 328 Pfam PF07859 alpha/beta hydrolase fold 97 305 1.6E-41 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 AMIS_46800 3187ad486030c8ef0310f5d516ea2962 328 Gene3D G3DSA:3.40.50.1820 57 327 4.6E-56 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_46800 3187ad486030c8ef0310f5d516ea2962 328 SUPERFAMILY SSF53474 68 319 2.46E-46 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_9980 d88e8eb7afedf1c402b2de545074bbdf 977 SUPERFAMILY SSF49785 868 976 1.87E-10 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_9980 d88e8eb7afedf1c402b2de545074bbdf 977 SUPERFAMILY SSF51445 47 386 1.79E-76 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_9980 d88e8eb7afedf1c402b2de545074bbdf 977 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 92 347 1.3E-38 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMIS_9980 d88e8eb7afedf1c402b2de545074bbdf 977 SMART SM00606 853 970 6.1E-4 T 14-10-2018 IPR006584 Cellulose binding, type IV GO:0030246 AMIS_9980 d88e8eb7afedf1c402b2de545074bbdf 977 Gene3D G3DSA:2.60.40.10 731 841 1.3E-32 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_9980 d88e8eb7afedf1c402b2de545074bbdf 977 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 388 727 1.3E-55 T 14-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 AMIS_9980 d88e8eb7afedf1c402b2de545074bbdf 977 Gene3D G3DSA:3.40.50.1700 380 694 8.1E-200 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 AMIS_9980 d88e8eb7afedf1c402b2de545074bbdf 977 Pfam PF14310 Fibronectin type III-like domain 764 834 1.5E-22 T 14-10-2018 IPR026891 Fibronectin type III-like domain AMIS_9980 d88e8eb7afedf1c402b2de545074bbdf 977 Gene3D G3DSA:2.60.120.380 464 586 8.1E-200 T 14-10-2018 AMIS_9980 d88e8eb7afedf1c402b2de545074bbdf 977 Gene3D G3DSA:2.60.120.260 842 977 4.5E-15 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_9980 d88e8eb7afedf1c402b2de545074bbdf 977 SUPERFAMILY SSF52279 388 730 3.27E-46 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 AMIS_9980 d88e8eb7afedf1c402b2de545074bbdf 977 SMART SM01217 764 834 7.4E-28 T 14-10-2018 IPR026891 Fibronectin type III-like domain AMIS_9980 d88e8eb7afedf1c402b2de545074bbdf 977 PRINTS PR00133 Glycosyl hydrolase family 3 signature 109 128 2.4E-7 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMIS_9980 d88e8eb7afedf1c402b2de545074bbdf 977 PRINTS PR00133 Glycosyl hydrolase family 3 signature 198 214 2.4E-7 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMIS_9980 d88e8eb7afedf1c402b2de545074bbdf 977 Pfam PF03422 Carbohydrate binding module (family 6) 870 969 3.0E-11 T 14-10-2018 IPR005084 Carbohydrate binding module family 6 GO:0030246 AMIS_9980 d88e8eb7afedf1c402b2de545074bbdf 977 Gene3D G3DSA:3.20.20.300 61 730 8.1E-200 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 AMIS_56340 7ac2e4034549c559640cdf40651ae134 1809 Gene3D G3DSA:3.40.50.300 1291 1444 2.3E-18 T 14-10-2018 AMIS_56340 7ac2e4034549c559640cdf40651ae134 1809 SUPERFAMILY SSF52980 1477 1594 3.16E-7 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AMIS_56340 7ac2e4034549c559640cdf40651ae134 1809 Pfam PF13086 AAA domain 313 376 9.4E-7 T 14-10-2018 AMIS_56340 7ac2e4034549c559640cdf40651ae134 1809 Gene3D G3DSA:3.40.50.300 248 513 5.2E-15 T 14-10-2018 AMIS_56340 7ac2e4034549c559640cdf40651ae134 1809 Gene3D G3DSA:3.40.50.300 1079 1270 5.9E-10 T 14-10-2018 AMIS_56340 7ac2e4034549c559640cdf40651ae134 1809 Pfam PF11784 Protein of unknown function (DUF3320) 1629 1668 1.9E-11 T 14-10-2018 IPR021754 Protein of unknown function DUF3320 AMIS_56340 7ac2e4034549c559640cdf40651ae134 1809 Pfam PF13195 Protein of unknown function (DUF4011) 29 194 2.7E-18 T 14-10-2018 IPR025103 Protein of unknown function DUF4011 AMIS_56340 7ac2e4034549c559640cdf40651ae134 1809 SUPERFAMILY SSF52540 313 396 6.25E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_56340 7ac2e4034549c559640cdf40651ae134 1809 SUPERFAMILY SSF52540 1024 1438 2.42E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_56340 7ac2e4034549c559640cdf40651ae134 1809 SUPERFAMILY SSF52540 329 556 2.2E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_56340 7ac2e4034549c559640cdf40651ae134 1809 Pfam PF13087 AAA domain 1334 1438 6.8E-11 T 14-10-2018 AMIS_56340 7ac2e4034549c559640cdf40651ae134 1809 Gene3D G3DSA:3.40.960.10 1478 1582 6.2E-6 T 14-10-2018 AMIS_49940 9a47db695f0971e75fa9fb93be13c48a 246 SUPERFAMILY SSF52172 3 182 2.41E-39 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_49940 9a47db695f0971e75fa9fb93be13c48a 246 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 218 1.0E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_49940 9a47db695f0971e75fa9fb93be13c48a 246 SMART SM00448 3 114 2.2E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_49940 9a47db695f0971e75fa9fb93be13c48a 246 Gene3D G3DSA:3.40.50.2300 1 123 3.7E-37 T 14-10-2018 AMIS_49940 9a47db695f0971e75fa9fb93be13c48a 246 Gene3D G3DSA:1.10.10.10 126 222 2.2E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_49940 9a47db695f0971e75fa9fb93be13c48a 246 Pfam PF00072 Response regulator receiver domain 6 114 6.6E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_49940 9a47db695f0971e75fa9fb93be13c48a 246 SMART SM00862 147 218 1.2E-28 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_52220 7786495b902e4481b82a93619718698b 357 Pfam PF13407 Periplasmic binding protein domain 25 309 1.6E-62 T 14-10-2018 IPR025997 Periplasmic binding protein AMIS_52220 7786495b902e4481b82a93619718698b 357 Gene3D G3DSA:3.40.50.2300 25 331 2.3E-127 T 14-10-2018 AMIS_52220 7786495b902e4481b82a93619718698b 357 SUPERFAMILY SSF53822 23 343 3.62E-63 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_52220 7786495b902e4481b82a93619718698b 357 Gene3D G3DSA:3.40.50.2300 127 352 2.3E-127 T 14-10-2018 AMIS_36370 bce50a165eaa134a8274c4d73dcabbb5 1423 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 1359 1398 2.4E-11 T 14-10-2018 IPR011964 YVTN beta-propeller repeat AMIS_36370 bce50a165eaa134a8274c4d73dcabbb5 1423 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 1274 1314 8.6E-9 T 14-10-2018 IPR011964 YVTN beta-propeller repeat AMIS_36370 bce50a165eaa134a8274c4d73dcabbb5 1423 SUPERFAMILY SSF50974 1199 1420 9.68E-49 T 14-10-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 AMIS_36370 bce50a165eaa134a8274c4d73dcabbb5 1423 ProSitePatterns PS00018 EF-hand calcium-binding domain. 187 199 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site AMIS_36370 bce50a165eaa134a8274c4d73dcabbb5 1423 Gene3D G3DSA:3.40.50.1460 6 171 3.3E-5 T 14-10-2018 AMIS_36370 bce50a165eaa134a8274c4d73dcabbb5 1423 Gene3D G3DSA:2.130.10.10 1121 1299 1.5E-37 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_36370 bce50a165eaa134a8274c4d73dcabbb5 1423 SUPERFAMILY SSF51004 1128 1236 8.89E-17 T 14-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily AMIS_36370 bce50a165eaa134a8274c4d73dcabbb5 1423 Gene3D G3DSA:2.130.10.10 1313 1423 2.2E-31 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_36370 bce50a165eaa134a8274c4d73dcabbb5 1423 Pfam PF10282 Lactonase, 7-bladed beta-propeller 1252 1421 7.4E-11 T 14-10-2018 IPR019405 Lactonase, 7-bladed beta propeller AMIS_7270 e0fc030b193d2ba85bdd7b8323b67823 275 Gene3D G3DSA:1.10.10.10 9 131 4.9E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_7270 e0fc030b193d2ba85bdd7b8323b67823 275 SUPERFAMILY SSF46785 21 79 4.02E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_7270 e0fc030b193d2ba85bdd7b8323b67823 275 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 55 73 9.2E-10 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AMIS_7270 e0fc030b193d2ba85bdd7b8323b67823 275 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 41 55 9.2E-10 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AMIS_7270 e0fc030b193d2ba85bdd7b8323b67823 275 SUPERFAMILY SSF100950 93 254 5.65E-31 T 14-10-2018 IPR037171 NagB/RpiA transferase-like AMIS_7270 e0fc030b193d2ba85bdd7b8323b67823 275 SMART SM00420 23 75 5.4E-17 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AMIS_7270 e0fc030b193d2ba85bdd7b8323b67823 275 ProSitePatterns PS00894 DeoR-type HTH domain signature. 23 57 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AMIS_7270 e0fc030b193d2ba85bdd7b8323b67823 275 Pfam PF00455 DeoR C terminal sensor domain 94 252 9.7E-48 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain AMIS_7270 e0fc030b193d2ba85bdd7b8323b67823 275 SMART SM01134 91 253 3.9E-60 T 14-10-2018 AMIS_7270 e0fc030b193d2ba85bdd7b8323b67823 275 Pfam PF08220 DeoR-like helix-turn-helix domain 23 77 1.0E-16 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AMIS_19280 859094b71a531936aabf84c020a70795 381 Gene3D G3DSA:1.10.540.10 2 116 3.8E-28 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMIS_19280 859094b71a531936aabf84c020a70795 381 SUPERFAMILY SSF56645 7 243 1.96E-69 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMIS_19280 859094b71a531936aabf84c020a70795 381 SUPERFAMILY SSF47203 231 375 1.61E-19 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMIS_19280 859094b71a531936aabf84c020a70795 381 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 231 373 7.6E-25 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMIS_19280 859094b71a531936aabf84c020a70795 381 Gene3D G3DSA:1.20.140.10 236 379 1.2E-31 T 14-10-2018 AMIS_19280 859094b71a531936aabf84c020a70795 381 Gene3D G3DSA:2.40.110.10 122 235 9.5E-37 T 14-10-2018 AMIS_19280 859094b71a531936aabf84c020a70795 381 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 5 116 2.9E-20 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMIS_19280 859094b71a531936aabf84c020a70795 381 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 218 3.8E-23 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMIS_25720 9c85260ccf107fb31c9ed395428e98b5 217 Pfam PF00072 Response regulator receiver domain 6 110 1.4E-17 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_25720 9c85260ccf107fb31c9ed395428e98b5 217 SMART SM00421 150 212 1.1E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_25720 9c85260ccf107fb31c9ed395428e98b5 217 Gene3D G3DSA:3.40.50.12740 4 209 2.2E-49 T 14-10-2018 AMIS_25720 9c85260ccf107fb31c9ed395428e98b5 217 SUPERFAMILY SSF52172 1 136 6.83E-25 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_25720 9c85260ccf107fb31c9ed395428e98b5 217 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 198 6.4E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_25720 9c85260ccf107fb31c9ed395428e98b5 217 SUPERFAMILY SSF46894 138 199 3.74E-16 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_25720 9c85260ccf107fb31c9ed395428e98b5 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 4.3E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_25720 9c85260ccf107fb31c9ed395428e98b5 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 4.3E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_25720 9c85260ccf107fb31c9ed395428e98b5 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 4.3E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_25720 9c85260ccf107fb31c9ed395428e98b5 217 SMART SM00448 4 122 8.4E-16 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_25720 9c85260ccf107fb31c9ed395428e98b5 217 ProSitePatterns PS00622 LuxR-type HTH domain signature. 167 194 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_35870 f5c7924457bdd2e66c59b476631bbd69 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 185 6.2E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_35870 f5c7924457bdd2e66c59b476631bbd69 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 197 6.2E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_35870 f5c7924457bdd2e66c59b476631bbd69 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 169 6.2E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_35870 f5c7924457bdd2e66c59b476631bbd69 225 Pfam PF00196 Bacterial regulatory proteins, luxR family 154 209 2.4E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_35870 f5c7924457bdd2e66c59b476631bbd69 225 SUPERFAMILY SSF52172 2 135 1.02E-33 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_35870 f5c7924457bdd2e66c59b476631bbd69 225 Pfam PF00072 Response regulator receiver domain 4 117 6.5E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_35870 f5c7924457bdd2e66c59b476631bbd69 225 SMART SM00448 2 117 7.3E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_35870 f5c7924457bdd2e66c59b476631bbd69 225 SUPERFAMILY SSF46894 148 215 2.99E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_35870 f5c7924457bdd2e66c59b476631bbd69 225 Gene3D G3DSA:3.40.50.12740 2 215 2.7E-67 T 14-10-2018 AMIS_35870 f5c7924457bdd2e66c59b476631bbd69 225 SMART SM00421 152 209 1.6E-21 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_58460 3cba54bc2f5de249e725ec59d3389617 191 Gene3D G3DSA:1.10.357.10 4 191 1.5E-17 T 14-10-2018 AMIS_58460 3cba54bc2f5de249e725ec59d3389617 191 SUPERFAMILY SSF48498 126 190 4.85E-6 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_58460 3cba54bc2f5de249e725ec59d3389617 191 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 52 1.4E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_58460 3cba54bc2f5de249e725ec59d3389617 191 SUPERFAMILY SSF46689 4 73 2.92E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_60280 d7b8701abdacf6c546ba296c2450d523 204 Pfam PF11611 Domain of unknown function (DUF4352) 75 198 5.1E-30 T 14-10-2018 IPR029051 Domain of unknown function DUF4352 AMIS_60280 d7b8701abdacf6c546ba296c2450d523 204 Gene3D G3DSA:2.60.40.1240 67 193 1.5E-31 T 14-10-2018 IPR029050 Immunoprotective extracellular, immunoglobulin-like domain superfamily AMIS_6100 eeea67fe9760e3d8183ee9cbac72c0cd 141 SUPERFAMILY SSF54686 11 137 1.09E-51 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 AMIS_6100 eeea67fe9760e3d8183ee9cbac72c0cd 141 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 3 129 2.9E-51 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_6100 eeea67fe9760e3d8183ee9cbac72c0cd 141 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 136 34.848 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_6100 eeea67fe9760e3d8183ee9cbac72c0cd 141 Gene3D G3DSA:3.90.1170.10 3 141 1.6E-47 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 AMIS_6100 eeea67fe9760e3d8183ee9cbac72c0cd 141 Pfam PF00252 Ribosomal protein L16p/L10e 11 134 1.5E-44 T 14-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 AMIS_6100 eeea67fe9760e3d8183ee9cbac72c0cd 141 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 84 95 - T 14-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_6100 eeea67fe9760e3d8183ee9cbac72c0cd 141 PRINTS PR00060 Ribosomal protein L16 signature 26 38 9.9E-38 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_6100 eeea67fe9760e3d8183ee9cbac72c0cd 141 PRINTS PR00060 Ribosomal protein L16 signature 44 55 9.9E-38 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_6100 eeea67fe9760e3d8183ee9cbac72c0cd 141 PRINTS PR00060 Ribosomal protein L16 signature 60 89 9.9E-38 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_6100 eeea67fe9760e3d8183ee9cbac72c0cd 141 PRINTS PR00060 Ribosomal protein L16 signature 90 119 9.9E-38 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_42900 97886825201a7d0fdf502eaffabfb08e 222 SMART SM00421 159 216 1.3E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_42900 97886825201a7d0fdf502eaffabfb08e 222 Pfam PF00196 Bacterial regulatory proteins, luxR family 162 216 6.8E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_42900 97886825201a7d0fdf502eaffabfb08e 222 SUPERFAMILY SSF46894 146 222 7.14E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_42900 97886825201a7d0fdf502eaffabfb08e 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 176 3.1E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_42900 97886825201a7d0fdf502eaffabfb08e 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 192 204 3.1E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_42900 97886825201a7d0fdf502eaffabfb08e 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 192 3.1E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_42900 97886825201a7d0fdf502eaffabfb08e 222 ProSitePatterns PS00622 LuxR-type HTH domain signature. 176 203 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_42900 97886825201a7d0fdf502eaffabfb08e 222 SUPERFAMILY SSF52172 9 143 2.42E-34 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_42900 97886825201a7d0fdf502eaffabfb08e 222 Pfam PF00072 Response regulator receiver domain 12 124 3.5E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_42900 97886825201a7d0fdf502eaffabfb08e 222 SMART SM00448 10 123 1.1E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_42900 97886825201a7d0fdf502eaffabfb08e 222 Gene3D G3DSA:3.40.50.12740 10 222 1.3E-66 T 14-10-2018 AMIS_8670 608ed3bfafed466d1a78cb7bb57ce4be 407 Gene3D G3DSA:3.40.50.10490 43 200 3.0E-21 T 14-10-2018 AMIS_8670 608ed3bfafed466d1a78cb7bb57ce4be 407 Pfam PF10432 Bacterial phospho-glucose isomerase C-terminal SIS domain 221 397 1.3E-45 T 14-10-2018 IPR019490 Bifunctional glucose-6-phosphate/mannose-6-phosphate isomerase, C-terminal GO:0004347|GO:0004476|GO:0005975 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00051+5.3.1.8|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.8+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 AMIS_8670 608ed3bfafed466d1a78cb7bb57ce4be 407 Pfam PF01380 SIS domain 72 156 1.2E-5 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AMIS_8670 608ed3bfafed466d1a78cb7bb57ce4be 407 SUPERFAMILY SSF53697 77 392 1.0E-64 T 14-10-2018 AMIS_74640 7989e5b3f70a3fc1a6f6a2acee88795f 550 Gene3D G3DSA:3.40.120.10 327 442 2.4E-28 T 14-10-2018 AMIS_74640 7989e5b3f70a3fc1a6f6a2acee88795f 550 SUPERFAMILY SSF53738 41 239 5.89E-39 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMIS_74640 7989e5b3f70a3fc1a6f6a2acee88795f 550 SUPERFAMILY SSF53738 216 319 3.88E-21 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMIS_74640 7989e5b3f70a3fc1a6f6a2acee88795f 550 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 146 155 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMIS_74640 7989e5b3f70a3fc1a6f6a2acee88795f 550 SUPERFAMILY SSF53738 307 442 4.71E-27 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMIS_74640 7989e5b3f70a3fc1a6f6a2acee88795f 550 SUPERFAMILY SSF55957 433 523 1.44E-11 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMIS_74640 7989e5b3f70a3fc1a6f6a2acee88795f 550 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 232 251 1.3E-8 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMIS_74640 7989e5b3f70a3fc1a6f6a2acee88795f 550 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 145 159 1.3E-8 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMIS_74640 7989e5b3f70a3fc1a6f6a2acee88795f 550 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 299 314 1.3E-8 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMIS_74640 7989e5b3f70a3fc1a6f6a2acee88795f 550 Gene3D G3DSA:3.40.120.10 215 326 5.5E-23 T 14-10-2018 AMIS_74640 7989e5b3f70a3fc1a6f6a2acee88795f 550 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 328 439 1.0E-18 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMIS_74640 7989e5b3f70a3fc1a6f6a2acee88795f 550 Gene3D G3DSA:3.30.310.50 446 533 5.0E-8 T 14-10-2018 AMIS_74640 7989e5b3f70a3fc1a6f6a2acee88795f 550 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 52 193 9.9E-36 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMIS_74640 7989e5b3f70a3fc1a6f6a2acee88795f 550 Gene3D G3DSA:3.40.120.10 42 199 6.1E-41 T 14-10-2018 AMIS_74640 7989e5b3f70a3fc1a6f6a2acee88795f 550 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 217 317 1.5E-23 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMIS_74640 7989e5b3f70a3fc1a6f6a2acee88795f 550 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 469 518 1.8E-8 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMIS_29020 ccb083b6c82a20d1bc5822f421d6a043 419 SUPERFAMILY SSF103473 13 397 3.92E-43 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_29020 ccb083b6c82a20d1bc5822f421d6a043 419 Gene3D G3DSA:1.20.1250.20 12 400 9.3E-35 T 14-10-2018 AMIS_29020 ccb083b6c82a20d1bc5822f421d6a043 419 Pfam PF05977 Transmembrane secretion effector 12 396 7.3E-32 T 14-10-2018 IPR010290 Transmembrane secretion effector AMIS_54280 df43e02a0f39cb08cb64e1511abc2bdc 139 SUPERFAMILY SSF159664 2 123 8.5E-31 T 14-10-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 AMIS_54280 df43e02a0f39cb08cb64e1511abc2bdc 139 Gene3D G3DSA:3.30.420.180 1 127 4.2E-30 T 14-10-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 AMIS_54280 df43e02a0f39cb08cb64e1511abc2bdc 139 Pfam PF01890 Cobalamin synthesis G C-terminus 2 120 1.1E-28 T 14-10-2018 IPR002750 CobE/GbiG C-terminal domain GO:0009236 AMIS_45680 6137dba47e4fd56e960afb6285ca5fd6 742 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 45 173 2.4E-16 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMIS_45680 6137dba47e4fd56e960afb6285ca5fd6 742 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 313 543 7.9E-22 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMIS_45680 6137dba47e4fd56e960afb6285ca5fd6 742 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 569 660 1.3E-6 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMIS_45680 6137dba47e4fd56e960afb6285ca5fd6 742 SUPERFAMILY SSF56003 47 229 9.72E-26 T 14-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 AMIS_45680 6137dba47e4fd56e960afb6285ca5fd6 742 Gene3D G3DSA:3.90.1170.50 179 275 4.5E-6 T 14-10-2018 AMIS_45680 6137dba47e4fd56e960afb6285ca5fd6 742 Gene3D G3DSA:3.30.365.10 40 178 3.3E-24 T 14-10-2018 AMIS_45680 6137dba47e4fd56e960afb6285ca5fd6 742 SMART SM01008 206 285 2.1E-4 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AMIS_45680 6137dba47e4fd56e960afb6285ca5fd6 742 Gene3D G3DSA:3.30.365.10 313 429 8.4E-20 T 14-10-2018 AMIS_45680 6137dba47e4fd56e960afb6285ca5fd6 742 Gene3D G3DSA:3.30.365.10 324 417 8.4E-20 T 14-10-2018 AMIS_45680 6137dba47e4fd56e960afb6285ca5fd6 742 Gene3D G3DSA:3.30.365.10 510 721 8.8E-36 T 14-10-2018 AMIS_45680 6137dba47e4fd56e960afb6285ca5fd6 742 PIRSF PIRSF036389 1 722 3.8E-146 T 14-10-2018 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related AMIS_45680 6137dba47e4fd56e960afb6285ca5fd6 742 SUPERFAMILY SSF56003 313 715 3.72E-79 T 14-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 AMIS_22640 ec1c736663e1b536c704969b09ac2715 133 SUPERFAMILY SSF103196 9 129 7.19E-32 T 14-10-2018 AMIS_22640 ec1c736663e1b536c704969b09ac2715 133 Gene3D G3DSA:3.30.450.30 8 130 1.0E-38 T 14-10-2018 AMIS_22640 ec1c736663e1b536c704969b09ac2715 133 Pfam PF03259 Roadblock/LC7 domain 13 99 2.3E-16 T 14-10-2018 IPR004942 Roadblock/LAMTOR2 domain AMIS_22640 ec1c736663e1b536c704969b09ac2715 133 SMART SM00960 11 100 3.0E-18 T 14-10-2018 IPR004942 Roadblock/LAMTOR2 domain AMIS_18180 666f3c3d94befab3503f0c0697b1c1de 579 SUPERFAMILY SSF52540 335 575 2.47E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_18180 666f3c3d94befab3503f0c0697b1c1de 579 Pfam PF00664 ABC transporter transmembrane region 31 299 4.0E-37 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AMIS_18180 666f3c3d94befab3503f0c0697b1c1de 579 Gene3D G3DSA:1.20.1560.10 7 331 2.2E-53 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMIS_18180 666f3c3d94befab3503f0c0697b1c1de 579 Gene3D G3DSA:3.40.50.300 334 579 6.3E-66 T 14-10-2018 AMIS_18180 666f3c3d94befab3503f0c0697b1c1de 579 SUPERFAMILY SSF90123 24 320 1.05E-54 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMIS_18180 666f3c3d94befab3503f0c0697b1c1de 579 Pfam PF00005 ABC transporter 358 506 3.7E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_18180 666f3c3d94befab3503f0c0697b1c1de 579 SMART SM00382 367 552 5.6E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_40140 540193d6421083fcfa7217bb180ee159 276 Pfam PF02665 Nitrate reductase gamma subunit 2 222 2.4E-84 T 14-10-2018 IPR023234 NarG-like domain AMIS_40140 540193d6421083fcfa7217bb180ee159 276 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 2 223 2.6E-64 T 14-10-2018 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 AMIS_40140 540193d6421083fcfa7217bb180ee159 276 SUPERFAMILY SSF103501 1 222 8.76E-65 T 14-10-2018 IPR036197 NarG-like superfamily AMIS_40140 540193d6421083fcfa7217bb180ee159 276 Gene3D G3DSA:1.20.950.20 1 214 2.2E-74 T 14-10-2018 AMIS_24900 3ab90414561b6e62879bff7cebe697c0 456 Gene3D G3DSA:3.50.50.60 72 438 4.4E-11 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_24900 3ab90414561b6e62879bff7cebe697c0 456 SUPERFAMILY SSF51905 11 245 3.24E-15 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_24900 3ab90414561b6e62879bff7cebe697c0 456 SUPERFAMILY SSF51905 200 429 1.43E-6 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_24900 3ab90414561b6e62879bff7cebe697c0 456 Pfam PF13454 FAD-NAD(P)-binding 23 166 1.2E-31 T 14-10-2018 IPR038732 FAD-dependent urate hydroxylase HpyO, FAD/NAD(P)-binding domain AMIS_24900 3ab90414561b6e62879bff7cebe697c0 456 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 22 41 2.9E-5 T 14-10-2018 AMIS_24900 3ab90414561b6e62879bff7cebe697c0 456 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 203 221 2.9E-5 T 14-10-2018 AMIS_24900 3ab90414561b6e62879bff7cebe697c0 456 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 157 175 2.9E-5 T 14-10-2018 AMIS_58680 fdc8979c397fd8ef34cc263d1d43ad2f 250 SUPERFAMILY SSF49899 32 247 1.09E-13 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily AMIS_58680 fdc8979c397fd8ef34cc263d1d43ad2f 250 Gene3D G3DSA:2.60.120.200 43 248 2.4E-11 T 14-10-2018 AMIS_58680 fdc8979c397fd8ef34cc263d1d43ad2f 250 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 130 247 4.4E-9 T 14-10-2018 AMIS_6140 e6205aa1802613479a8c0003d589223a 104 SMART SM00739 2 29 1.2E-4 T 14-10-2018 IPR005824 KOW AMIS_6140 e6205aa1802613479a8c0003d589223a 104 SUPERFAMILY SSF50104 2 100 1.17E-28 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily AMIS_6140 e6205aa1802613479a8c0003d589223a 104 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 1 98 21.005 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_6140 e6205aa1802613479a8c0003d589223a 104 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 38 103 4.8E-22 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_6140 e6205aa1802613479a8c0003d589223a 104 Pfam PF00467 KOW motif 5 36 5.4E-7 T 14-10-2018 IPR005824 KOW AMIS_6140 e6205aa1802613479a8c0003d589223a 104 ProSitePatterns PS01108 Ribosomal protein L24 signature. 6 23 - T 14-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_6140 e6205aa1802613479a8c0003d589223a 104 Gene3D G3DSA:2.30.30.30 1 104 4.3E-34 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 AMIS_6140 e6205aa1802613479a8c0003d589223a 104 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 2 103 1.5E-35 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_37350 7ff198fc359e019fae9a445e7ead90e1 258 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_37350 7ff198fc359e019fae9a445e7ead90e1 258 TIGRFAM TIGR01166 cbiO: cobalt ABC transporter, ATP-binding protein 16 200 3.6E-66 T 14-10-2018 IPR005876 Cobalt transport protein ATP-binding subunit GO:0006824 AMIS_37350 7ff198fc359e019fae9a445e7ead90e1 258 Gene3D G3DSA:3.40.50.300 6 243 1.6E-68 T 14-10-2018 AMIS_37350 7ff198fc359e019fae9a445e7ead90e1 258 SUPERFAMILY SSF52540 7 230 2.23E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_37350 7ff198fc359e019fae9a445e7ead90e1 258 SMART SM00382 32 230 3.8E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_37350 7ff198fc359e019fae9a445e7ead90e1 258 Pfam PF00005 ABC transporter 23 171 5.2E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_47660 b78773cc6652e2900c7f69a981128a82 300 SUPERFAMILY SSF103481 195 277 1.96E-7 T 14-10-2018 AMIS_47660 b78773cc6652e2900c7f69a981128a82 300 Pfam PF00892 EamA-like transporter family 143 270 1.8E-13 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMIS_47660 b78773cc6652e2900c7f69a981128a82 300 SUPERFAMILY SSF103481 42 135 7.32E-7 T 14-10-2018 AMIS_62690 7e5facd4373d711e8ff99296ac6eb1c8 166 SUPERFAMILY SSF46785 16 156 1.34E-35 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_62690 7e5facd4373d711e8ff99296ac6eb1c8 166 Pfam PF01638 HxlR-like helix-turn-helix 30 118 1.0E-20 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type AMIS_62690 7e5facd4373d711e8ff99296ac6eb1c8 166 Gene3D G3DSA:1.10.10.10 16 166 1.0E-44 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_15040 adbbcac0f2db4ba817cd350542bd931e 247 SUPERFAMILY SSF53335 25 204 5.02E-34 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_15040 adbbcac0f2db4ba817cd350542bd931e 247 Gene3D G3DSA:3.40.50.150 6 247 2.2E-53 T 14-10-2018 AMIS_15040 adbbcac0f2db4ba817cd350542bd931e 247 Pfam PF13649 Methyltransferase domain 37 133 9.5E-17 T 14-10-2018 AMIS_39660 edbe2ff5ff9b8883660b0d080156970a 165 Pfam PF01613 Flavin reductase like domain 20 164 3.8E-34 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 AMIS_39660 edbe2ff5ff9b8883660b0d080156970a 165 SUPERFAMILY SSF50475 12 164 9.81E-40 T 14-10-2018 AMIS_39660 edbe2ff5ff9b8883660b0d080156970a 165 Gene3D G3DSA:2.30.110.10 3 165 7.4E-46 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AMIS_39660 edbe2ff5ff9b8883660b0d080156970a 165 SMART SM00903 20 164 9.5E-43 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 AMIS_42390 f0cd7fa2fcc91c8cb466f4b10459ceae 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 1.4E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_42390 f0cd7fa2fcc91c8cb466f4b10459ceae 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 1.4E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_42390 f0cd7fa2fcc91c8cb466f4b10459ceae 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 1.4E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_42390 f0cd7fa2fcc91c8cb466f4b10459ceae 239 SUPERFAMILY SSF51735 5 233 2.25E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_42390 f0cd7fa2fcc91c8cb466f4b10459ceae 239 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMIS_42390 f0cd7fa2fcc91c8cb466f4b10459ceae 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 1.8E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_42390 f0cd7fa2fcc91c8cb466f4b10459ceae 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.8E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_42390 f0cd7fa2fcc91c8cb466f4b10459ceae 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 1.8E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_42390 f0cd7fa2fcc91c8cb466f4b10459ceae 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 1.8E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_42390 f0cd7fa2fcc91c8cb466f4b10459ceae 239 Gene3D G3DSA:3.40.50.720 3 230 1.1E-46 T 14-10-2018 AMIS_42390 f0cd7fa2fcc91c8cb466f4b10459ceae 239 Pfam PF00106 short chain dehydrogenase 4 183 2.8E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_25860 119bd3cf31cd8f49506f7ad9d3803750 534 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 165 9.6E-34 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AMIS_25860 119bd3cf31cd8f49506f7ad9d3803750 534 Gene3D G3DSA:3.40.50.970 347 534 2.6E-46 T 14-10-2018 AMIS_25860 119bd3cf31cd8f49506f7ad9d3803750 534 SUPERFAMILY SSF52467 150 326 5.4E-30 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AMIS_25860 119bd3cf31cd8f49506f7ad9d3803750 534 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 186 314 5.1E-22 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AMIS_25860 119bd3cf31cd8f49506f7ad9d3803750 534 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 413 432 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AMIS_25860 119bd3cf31cd8f49506f7ad9d3803750 534 Gene3D G3DSA:3.40.50.1220 181 346 3.5E-30 T 14-10-2018 AMIS_25860 119bd3cf31cd8f49506f7ad9d3803750 534 SUPERFAMILY SSF52518 356 532 3.93E-44 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold AMIS_25860 119bd3cf31cd8f49506f7ad9d3803750 534 Gene3D G3DSA:3.40.50.970 1 176 6.0E-36 T 14-10-2018 AMIS_25860 119bd3cf31cd8f49506f7ad9d3803750 534 SUPERFAMILY SSF52518 2 170 5.05E-33 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold AMIS_25860 119bd3cf31cd8f49506f7ad9d3803750 534 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 378 522 3.2E-27 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AMIS_27170 19e34d112cc3ad9f8d0afcc3ed606f32 320 Gene3D G3DSA:1.10.10.60 205 318 2.2E-23 T 14-10-2018 AMIS_27170 19e34d112cc3ad9f8d0afcc3ed606f32 320 Pfam PF12833 Helix-turn-helix domain 233 309 4.1E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMIS_27170 19e34d112cc3ad9f8d0afcc3ed606f32 320 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 262 304 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AMIS_27170 19e34d112cc3ad9f8d0afcc3ed606f32 320 SUPERFAMILY SSF46689 261 310 8.51E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_27170 19e34d112cc3ad9f8d0afcc3ed606f32 320 SMART SM00342 226 308 5.7E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMIS_27170 19e34d112cc3ad9f8d0afcc3ed606f32 320 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 292 308 3.4E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMIS_27170 19e34d112cc3ad9f8d0afcc3ed606f32 320 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 277 292 3.4E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMIS_51170 def7f93a78458f9836a8d51ba1fb0178 539 Pfam PF00128 Alpha amylase, catalytic domain 29 355 1.4E-58 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMIS_51170 def7f93a78458f9836a8d51ba1fb0178 539 Gene3D G3DSA:3.20.20.80 6 406 1.7E-114 T 14-10-2018 AMIS_51170 def7f93a78458f9836a8d51ba1fb0178 539 Gene3D G3DSA:3.90.400.10 106 168 1.7E-114 T 14-10-2018 AMIS_51170 def7f93a78458f9836a8d51ba1fb0178 539 SMART SM00642 14 378 5.4E-95 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMIS_51170 def7f93a78458f9836a8d51ba1fb0178 539 SUPERFAMILY SSF51445 3 425 4.03E-100 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_22340 3e37476071acae688f2d48e6a2b8982d 262 Pfam PF12697 Alpha/beta hydrolase family 4 241 5.8E-16 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_22340 3e37476071acae688f2d48e6a2b8982d 262 Gene3D G3DSA:3.40.50.1820 2 261 1.6E-30 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_22340 3e37476071acae688f2d48e6a2b8982d 262 SUPERFAMILY SSF53474 3 261 3.19E-31 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_66320 0b5a4764f0790d88c701a9fd164506bd 133 Gene3D G3DSA:2.60.40.790 5 130 1.1E-24 T 14-10-2018 IPR008978 HSP20-like chaperone AMIS_66320 0b5a4764f0790d88c701a9fd164506bd 133 Pfam PF00011 Hsp20/alpha crystallin family 31 129 7.5E-17 T 14-10-2018 IPR002068 Alpha crystallin/Hsp20 domain AMIS_66320 0b5a4764f0790d88c701a9fd164506bd 133 SUPERFAMILY SSF49764 17 127 2.49E-25 T 14-10-2018 IPR008978 HSP20-like chaperone AMIS_5930 bd712c7108c7a37754a31c9530ad6bf0 127 SUPERFAMILY SSF48300 4 52 4.97E-14 T 14-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_5930 bd712c7108c7a37754a31c9530ad6bf0 127 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 127 1.1E-45 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_5930 bd712c7108c7a37754a31c9530ad6bf0 127 Gene3D G3DSA:1.20.5.710 4 56 8.1E-19 T 14-10-2018 AMIS_5930 bd712c7108c7a37754a31c9530ad6bf0 127 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 6 52 2.0E-17 T 14-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_5930 bd712c7108c7a37754a31c9530ad6bf0 127 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 62 101 3.0E-10 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_5930 bd712c7108c7a37754a31c9530ad6bf0 127 Gene3D G3DSA:3.30.1390.10 57 127 1.2E-28 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AMIS_5930 bd712c7108c7a37754a31c9530ad6bf0 127 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 3 127 23.861 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_5930 bd712c7108c7a37754a31c9530ad6bf0 127 SUPERFAMILY SSF54736 57 127 6.28E-23 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AMIS_5930 bd712c7108c7a37754a31c9530ad6bf0 127 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 61 127 6.4E-28 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_8810 6a9c4c1d402c84274a940b481cae38bc 75 Pfam PF12728 Helix-turn-helix domain 9 55 8.3E-13 T 14-10-2018 AMIS_8810 6a9c4c1d402c84274a940b481cae38bc 75 SUPERFAMILY SSF46955 8 57 1.37E-5 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily AMIS_8810 6a9c4c1d402c84274a940b481cae38bc 75 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 11 53 8.6E-11 T 14-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 AMIS_8810 6a9c4c1d402c84274a940b481cae38bc 75 Gene3D G3DSA:1.10.1660.10 1 55 9.9E-10 T 14-10-2018 AMIS_43530 9029c07e8e3fcb16777dccdbf6a0ba91 696 Gene3D G3DSA:3.40.50.300 472 566 2.8E-8 T 14-10-2018 AMIS_43530 9029c07e8e3fcb16777dccdbf6a0ba91 696 Pfam PF13245 AAA domain 176 532 6.6E-14 T 14-10-2018 AMIS_43530 9029c07e8e3fcb16777dccdbf6a0ba91 696 Gene3D G3DSA:3.40.50.300 164 367 2.5E-11 T 14-10-2018 AMIS_43530 9029c07e8e3fcb16777dccdbf6a0ba91 696 SUPERFAMILY SSF52540 166 690 2.38E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_43530 9029c07e8e3fcb16777dccdbf6a0ba91 696 Pfam PF13538 UvrD-like helicase C-terminal domain 647 690 3.2E-8 T 14-10-2018 IPR027785 UvrD-like helicase C-terminal domain AMIS_34590 5b4e0998637c9ed5866e451dc76d9850 455 SUPERFAMILY SSF103473 2 446 1.44E-65 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_34590 5b4e0998637c9ed5866e451dc76d9850 455 Gene3D G3DSA:1.20.1250.20 252 447 2.1E-17 T 14-10-2018 AMIS_34590 5b4e0998637c9ed5866e451dc76d9850 455 PRINTS PR01036 Tetracycline resistance protein TetB signature 9 33 3.9E-8 T 14-10-2018 AMIS_34590 5b4e0998637c9ed5866e451dc76d9850 455 PRINTS PR01036 Tetracycline resistance protein TetB signature 130 154 3.9E-8 T 14-10-2018 AMIS_34590 5b4e0998637c9ed5866e451dc76d9850 455 PRINTS PR01036 Tetracycline resistance protein TetB signature 100 120 3.9E-8 T 14-10-2018 AMIS_34590 5b4e0998637c9ed5866e451dc76d9850 455 Pfam PF07690 Major Facilitator Superfamily 10 402 7.2E-49 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_34590 5b4e0998637c9ed5866e451dc76d9850 455 Gene3D G3DSA:1.20.1720.10 7 234 3.4E-52 T 14-10-2018 AMIS_76960 84cdcb8577d8d9aa51edd35d3851ee66 282 SMART SM00450 144 271 1.9E-22 T 14-10-2018 IPR001763 Rhodanese-like domain AMIS_76960 84cdcb8577d8d9aa51edd35d3851ee66 282 SMART SM00450 8 122 6.9E-22 T 14-10-2018 IPR001763 Rhodanese-like domain AMIS_76960 84cdcb8577d8d9aa51edd35d3851ee66 282 SUPERFAMILY SSF52821 159 275 4.19E-34 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily AMIS_76960 84cdcb8577d8d9aa51edd35d3851ee66 282 Gene3D G3DSA:3.40.250.10 143 277 1.3E-42 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily AMIS_76960 84cdcb8577d8d9aa51edd35d3851ee66 282 Gene3D G3DSA:3.40.250.10 1 141 4.3E-41 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily AMIS_76960 84cdcb8577d8d9aa51edd35d3851ee66 282 ProSitePatterns PS00683 Rhodanese C-terminal signature. 255 265 - T 14-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 AMIS_76960 84cdcb8577d8d9aa51edd35d3851ee66 282 SUPERFAMILY SSF52821 5 137 1.23E-36 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily AMIS_76960 84cdcb8577d8d9aa51edd35d3851ee66 282 Pfam PF00581 Rhodanese-like domain 149 266 2.4E-17 T 14-10-2018 IPR001763 Rhodanese-like domain AMIS_76960 84cdcb8577d8d9aa51edd35d3851ee66 282 Pfam PF00581 Rhodanese-like domain 9 118 1.3E-17 T 14-10-2018 IPR001763 Rhodanese-like domain AMIS_76960 84cdcb8577d8d9aa51edd35d3851ee66 282 ProSitePatterns PS00380 Rhodanese signature 1. 34 45 - T 14-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 AMIS_71240 68e885c46d9efbed7ea86e0a1bc834c7 615 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 612 7.6E-243 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AMIS_71240 68e885c46d9efbed7ea86e0a1bc834c7 615 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 612 44.688 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AMIS_71240 68e885c46d9efbed7ea86e0a1bc834c7 615 SUPERFAMILY SSF143975 4 423 4.84E-132 T 14-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AMIS_71240 68e885c46d9efbed7ea86e0a1bc834c7 615 Pfam PF00920 Dehydratase family 34 609 4.4E-214 T 14-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AMIS_71240 68e885c46d9efbed7ea86e0a1bc834c7 615 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 512 523 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AMIS_71240 68e885c46d9efbed7ea86e0a1bc834c7 615 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AMIS_71240 68e885c46d9efbed7ea86e0a1bc834c7 615 Gene3D G3DSA:3.50.30.80 424 575 7.4E-53 T 14-10-2018 AMIS_71240 68e885c46d9efbed7ea86e0a1bc834c7 615 SUPERFAMILY SSF52016 424 612 6.36E-59 T 14-10-2018 AMIS_17790 3d23b120a73f926370865e090107c9dc 466 Pfam PF10009 Uncharacterized protein conserved in bacteria (DUF2252) 52 452 2.8E-139 T 14-10-2018 IPR018721 Protein of unknown function DUF2252 AMIS_44640 49f4c60aa6b2ec428a1d62ca29a9c883 279 Pfam PF00376 MerR family regulatory protein 14 50 1.6E-12 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_44640 49f4c60aa6b2ec428a1d62ca29a9c883 279 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 48 68 1.7E-5 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_44640 49f4c60aa6b2ec428a1d62ca29a9c883 279 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 24 37 1.7E-5 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_44640 49f4c60aa6b2ec428a1d62ca29a9c883 279 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 24 1.7E-5 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_44640 49f4c60aa6b2ec428a1d62ca29a9c883 279 SMART SM00422 12 81 6.8E-18 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_44640 49f4c60aa6b2ec428a1d62ca29a9c883 279 SUPERFAMILY SSF46955 13 115 1.72E-21 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily AMIS_44640 49f4c60aa6b2ec428a1d62ca29a9c883 279 Gene3D G3DSA:1.10.1660.10 11 117 5.2E-21 T 14-10-2018 AMIS_15900 6662bc4281a94c72919429522c4e2626 118 SUPERFAMILY SSF54909 7 104 6.04E-21 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel AMIS_15900 6662bc4281a94c72919429522c4e2626 118 Gene3D G3DSA:3.30.70.100 9 104 4.6E-27 T 14-10-2018 AMIS_15900 6662bc4281a94c72919429522c4e2626 118 Pfam PF03992 Antibiotic biosynthesis monooxygenase 10 85 4.9E-10 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain AMIS_71200 0128a720c7df4ae636198d6ec51a564d 337 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 16 328 2.8E-127 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AMIS_71200 0128a720c7df4ae636198d6ec51a564d 337 Gene3D G3DSA:1.10.3730.40 184 337 1.2E-70 T 14-10-2018 AMIS_71200 0128a720c7df4ae636198d6ec51a564d 337 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 16 179 1.9E-73 T 14-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AMIS_71200 0128a720c7df4ae636198d6ec51a564d 337 Gene3D G3DSA:3.40.50.720 1 183 2.7E-75 T 14-10-2018 AMIS_71200 0128a720c7df4ae636198d6ec51a564d 337 PIRSF PIRSF000116 203 334 1.8E-13 T 14-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AMIS_71200 0128a720c7df4ae636198d6ec51a564d 337 PIRSF PIRSF000116 1 208 1.1E-41 T 14-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AMIS_71200 0128a720c7df4ae636198d6ec51a564d 337 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 3 330 45.176 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AMIS_71200 0128a720c7df4ae636198d6ec51a564d 337 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 185 328 2.5E-63 T 14-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AMIS_71200 0128a720c7df4ae636198d6ec51a564d 337 SUPERFAMILY SSF51735 4 184 1.13E-70 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_71200 0128a720c7df4ae636198d6ec51a564d 337 SUPERFAMILY SSF48179 185 330 1.63E-67 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMIS_25870 ab7f99c47bf30c43ae86303c342e4cd9 354 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 272 288 4.3E-18 T 14-10-2018 AMIS_25870 ab7f99c47bf30c43ae86303c342e4cd9 354 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 141 156 4.3E-18 T 14-10-2018 AMIS_25870 ab7f99c47bf30c43ae86303c342e4cd9 354 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 3 25 4.3E-18 T 14-10-2018 AMIS_25870 ab7f99c47bf30c43ae86303c342e4cd9 354 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 257 272 4.3E-18 T 14-10-2018 AMIS_25870 ab7f99c47bf30c43ae86303c342e4cd9 354 Pfam PF01494 FAD binding domain 2 73 6.7E-6 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 AMIS_25870 ab7f99c47bf30c43ae86303c342e4cd9 354 Pfam PF01494 FAD binding domain 145 314 3.4E-7 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 AMIS_25870 ab7f99c47bf30c43ae86303c342e4cd9 354 Gene3D G3DSA:3.50.50.60 2 331 1.0E-67 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_25870 ab7f99c47bf30c43ae86303c342e4cd9 354 SUPERFAMILY SSF51905 2 326 3.77E-44 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_47640 55a15f8011289d1f8f218c2d0775a8c1 63 SUPERFAMILY SSF69047 5 62 1.06E-9 T 14-10-2018 IPR036629 YjbJ superfamily AMIS_47640 55a15f8011289d1f8f218c2d0775a8c1 63 Pfam PF05532 CsbD-like 5 56 2.6E-16 T 14-10-2018 IPR008462 CsbD-like domain AMIS_47640 55a15f8011289d1f8f218c2d0775a8c1 63 Gene3D G3DSA:1.10.1470.10 4 63 5.5E-8 T 14-10-2018 IPR036629 YjbJ superfamily AMIS_17220 a7acae529738828e1e65ad13e5800adf 584 Gene3D G3DSA:3.40.50.970 386 578 8.0E-54 T 14-10-2018 AMIS_17220 a7acae529738828e1e65ad13e5800adf 584 SUPERFAMILY SSF52518 8 187 9.22E-39 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold AMIS_17220 a7acae529738828e1e65ad13e5800adf 584 PIRSF PIRSF036565 3 584 2.6E-161 T 14-10-2018 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme GO:0016831 AMIS_17220 a7acae529738828e1e65ad13e5800adf 584 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 418 562 7.2E-21 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AMIS_17220 a7acae529738828e1e65ad13e5800adf 584 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 204 329 3.8E-16 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AMIS_17220 a7acae529738828e1e65ad13e5800adf 584 Gene3D G3DSA:3.40.50.970 2 183 2.6E-67 T 14-10-2018 AMIS_17220 a7acae529738828e1e65ad13e5800adf 584 SUPERFAMILY SSF52467 169 346 1.15E-25 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AMIS_17220 a7acae529738828e1e65ad13e5800adf 584 SUPERFAMILY SSF52518 393 576 7.86E-44 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold AMIS_17220 a7acae529738828e1e65ad13e5800adf 584 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 453 472 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AMIS_17220 a7acae529738828e1e65ad13e5800adf 584 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 9 180 1.3E-31 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AMIS_17220 a7acae529738828e1e65ad13e5800adf 584 Gene3D G3DSA:3.40.50.1220 190 349 7.1E-29 T 14-10-2018 AMIS_67750 1781732c24638b2241897a6651f18080 488 Gene3D G3DSA:1.10.3210.10 7 476 7.1E-71 T 14-10-2018 AMIS_67750 1781732c24638b2241897a6651f18080 488 SMART SM00471 56 256 7.1E-13 T 14-10-2018 IPR003607 HD/PDEase domain AMIS_67750 1781732c24638b2241897a6651f18080 488 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 23 474 3.5E-64 T 14-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 AMIS_67750 1781732c24638b2241897a6651f18080 488 Pfam PF01966 HD domain 60 146 5.8E-12 T 14-10-2018 IPR006674 HD domain AMIS_67750 1781732c24638b2241897a6651f18080 488 SUPERFAMILY SSF109604 23 266 1.79E-47 T 14-10-2018 AMIS_67750 1781732c24638b2241897a6651f18080 488 Pfam PF13286 Phosphohydrolase-associated domain 367 471 3.3E-9 T 14-10-2018 IPR026875 Phosphohydrolase-associated domain AMIS_36660 344b8dfee04ae646a9a0414c8df655af 249 Pfam PF09339 IclR helix-turn-helix domain 7 56 1.2E-12 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AMIS_36660 344b8dfee04ae646a9a0414c8df655af 249 Gene3D G3DSA:3.30.450.40 75 243 2.0E-46 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_36660 344b8dfee04ae646a9a0414c8df655af 249 SUPERFAMILY SSF46785 6 73 3.79E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_36660 344b8dfee04ae646a9a0414c8df655af 249 SUPERFAMILY SSF55781 67 240 3.4E-40 T 14-10-2018 AMIS_36660 344b8dfee04ae646a9a0414c8df655af 249 Gene3D G3DSA:1.10.10.10 2 64 1.0E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_36660 344b8dfee04ae646a9a0414c8df655af 249 Pfam PF01614 Bacterial transcriptional regulator 120 228 6.2E-28 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal AMIS_36660 344b8dfee04ae646a9a0414c8df655af 249 SMART SM00346 3 92 7.1E-16 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AMIS_51020 c4717bb44fe372597c7a14e19e7ebc08 482 SUPERFAMILY SSF56176 4 216 1.07E-65 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AMIS_51020 c4717bb44fe372597c7a14e19e7ebc08 482 Gene3D G3DSA:3.30.70.2740 335 416 2.1E-10 T 14-10-2018 AMIS_51020 c4717bb44fe372597c7a14e19e7ebc08 482 Pfam PF02913 FAD linked oxidases, C-terminal domain 216 456 1.6E-68 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 AMIS_51020 c4717bb44fe372597c7a14e19e7ebc08 482 SUPERFAMILY SSF55103 219 461 1.62E-69 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AMIS_51020 c4717bb44fe372597c7a14e19e7ebc08 482 Gene3D G3DSA:1.10.45.10 417 457 9.1E-9 T 14-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AMIS_51020 c4717bb44fe372597c7a14e19e7ebc08 482 Pfam PF01565 FAD binding domain 41 179 1.8E-37 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AMIS_51020 c4717bb44fe372597c7a14e19e7ebc08 482 Gene3D G3DSA:3.30.465.40 5 234 2.8E-62 T 14-10-2018 AMIS_10160 708fbe5718a6d800c917bc640e4698f9 318 SMART SM00382 27 211 2.3E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_10160 708fbe5718a6d800c917bc640e4698f9 318 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_10160 708fbe5718a6d800c917bc640e4698f9 318 SUPERFAMILY SSF52540 2 224 2.97E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_10160 708fbe5718a6d800c917bc640e4698f9 318 Gene3D G3DSA:3.40.50.300 1 231 9.8E-66 T 14-10-2018 AMIS_10160 708fbe5718a6d800c917bc640e4698f9 318 Pfam PF00005 ABC transporter 19 161 6.5E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_51750 bfd2876ace8cafe47781b93c1432fef3 362 SMART SM00388 145 209 5.8E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_51750 bfd2876ace8cafe47781b93c1432fef3 362 SMART SM00304 91 144 1.0E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_51750 bfd2876ace8cafe47781b93c1432fef3 362 SUPERFAMILY SSF55874 207 361 1.7E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_51750 bfd2876ace8cafe47781b93c1432fef3 362 SUPERFAMILY SSF47384 130 205 9.81E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_51750 bfd2876ace8cafe47781b93c1432fef3 362 Pfam PF00672 HAMP domain 92 140 2.0E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_51750 bfd2876ace8cafe47781b93c1432fef3 362 Gene3D G3DSA:1.10.287.130 95 204 1.4E-24 T 14-10-2018 AMIS_51750 bfd2876ace8cafe47781b93c1432fef3 362 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 252 360 4.6E-13 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_51750 bfd2876ace8cafe47781b93c1432fef3 362 SMART SM00387 248 362 1.3E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_51750 bfd2876ace8cafe47781b93c1432fef3 362 SUPERFAMILY SSF158472 93 142 7.19E-8 T 14-10-2018 AMIS_51750 bfd2876ace8cafe47781b93c1432fef3 362 PRINTS PR00344 Bacterial sensor protein C-terminal signature 286 300 6.2E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_51750 bfd2876ace8cafe47781b93c1432fef3 362 PRINTS PR00344 Bacterial sensor protein C-terminal signature 322 340 6.2E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_51750 bfd2876ace8cafe47781b93c1432fef3 362 PRINTS PR00344 Bacterial sensor protein C-terminal signature 346 359 6.2E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_51750 bfd2876ace8cafe47781b93c1432fef3 362 Gene3D G3DSA:3.30.565.10 205 360 1.0E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_51750 bfd2876ace8cafe47781b93c1432fef3 362 Pfam PF00512 His Kinase A (phospho-acceptor) domain 146 205 3.6E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_56440 f81ee4d317048394dd2c77c2958cc373 391 PRINTS PR00409 Phthalate dioxygenase reductase family signature 265 284 9.8E-10 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AMIS_56440 f81ee4d317048394dd2c77c2958cc373 391 PRINTS PR00409 Phthalate dioxygenase reductase family signature 181 191 9.8E-10 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AMIS_56440 f81ee4d317048394dd2c77c2958cc373 391 PRINTS PR00409 Phthalate dioxygenase reductase family signature 243 257 9.8E-10 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AMIS_56440 f81ee4d317048394dd2c77c2958cc373 391 PRINTS PR00409 Phthalate dioxygenase reductase family signature 345 353 9.8E-10 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AMIS_56440 f81ee4d317048394dd2c77c2958cc373 391 PRINTS PR00409 Phthalate dioxygenase reductase family signature 229 243 9.8E-10 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AMIS_56440 f81ee4d317048394dd2c77c2958cc373 391 SUPERFAMILY SSF63380 156 257 1.04E-28 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AMIS_56440 f81ee4d317048394dd2c77c2958cc373 391 Pfam PF00970 Oxidoreductase FAD-binding domain 162 255 2.3E-11 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 AMIS_56440 f81ee4d317048394dd2c77c2958cc373 391 Gene3D G3DSA:3.40.50.80 257 382 1.4E-29 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMIS_56440 f81ee4d317048394dd2c77c2958cc373 391 Pfam PF00175 Oxidoreductase NAD-binding domain 266 359 6.8E-10 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AMIS_56440 f81ee4d317048394dd2c77c2958cc373 391 Gene3D G3DSA:1.10.490.10 1 149 2.2E-47 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 AMIS_56440 f81ee4d317048394dd2c77c2958cc373 391 SUPERFAMILY SSF52343 258 379 8.64E-29 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMIS_56440 f81ee4d317048394dd2c77c2958cc373 391 SUPERFAMILY SSF46458 1 138 2.0E-29 T 14-10-2018 IPR009050 Globin-like superfamily AMIS_56440 f81ee4d317048394dd2c77c2958cc373 391 Gene3D G3DSA:2.40.30.10 154 256 2.0E-31 T 14-10-2018 AMIS_56440 f81ee4d317048394dd2c77c2958cc373 391 Pfam PF00042 Globin 10 104 8.9E-5 T 14-10-2018 IPR000971 Globin GO:0020037 AMIS_33920 63403a9984cab64f3eb5dcb161af3108 182 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 2 149 3.6E-23 T 14-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 AMIS_33920 63403a9984cab64f3eb5dcb161af3108 182 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 2 153 6.0E-24 T 14-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 AMIS_33920 63403a9984cab64f3eb5dcb161af3108 182 Gene3D G3DSA:3.60.21.10 1 159 6.2E-35 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like AMIS_33920 63403a9984cab64f3eb5dcb161af3108 182 SUPERFAMILY SSF56300 2 166 1.27E-32 T 14-10-2018 AMIS_17570 86c6c349d251c1d5f8c9a55e1a6974ad 670 Pfam PF07690 Major Facilitator Superfamily 27 419 6.6E-49 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_17570 86c6c349d251c1d5f8c9a55e1a6974ad 670 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 23 441 5.5E-78 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 AMIS_17570 86c6c349d251c1d5f8c9a55e1a6974ad 670 Gene3D G3DSA:1.20.1720.10 23 231 5.6E-50 T 14-10-2018 AMIS_17570 86c6c349d251c1d5f8c9a55e1a6974ad 670 Gene3D G3DSA:1.20.1250.20 273 504 4.1E-20 T 14-10-2018 AMIS_17570 86c6c349d251c1d5f8c9a55e1a6974ad 670 Gene3D G3DSA:1.10.10.10 516 666 3.9E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_17570 86c6c349d251c1d5f8c9a55e1a6974ad 670 SUPERFAMILY SSF46785 538 661 1.79E-5 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_17570 86c6c349d251c1d5f8c9a55e1a6974ad 670 PRINTS PR01036 Tetracycline resistance protein TetB signature 410 429 3.7E-7 T 14-10-2018 AMIS_17570 86c6c349d251c1d5f8c9a55e1a6974ad 670 PRINTS PR01036 Tetracycline resistance protein TetB signature 368 388 3.7E-7 T 14-10-2018 AMIS_17570 86c6c349d251c1d5f8c9a55e1a6974ad 670 PRINTS PR01036 Tetracycline resistance protein TetB signature 116 136 3.7E-7 T 14-10-2018 AMIS_17570 86c6c349d251c1d5f8c9a55e1a6974ad 670 PRINTS PR01036 Tetracycline resistance protein TetB signature 146 170 3.7E-7 T 14-10-2018 AMIS_17570 86c6c349d251c1d5f8c9a55e1a6974ad 670 SUPERFAMILY SSF103473 18 500 3.75E-67 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_40810 eacd554561bc4b17516cc5d4c7ffd53d 252 SUPERFAMILY SSF55729 69 238 6.56E-16 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_40810 eacd554561bc4b17516cc5d4c7ffd53d 252 Gene3D G3DSA:3.40.630.30 11 246 1.2E-28 T 14-10-2018 AMIS_39480 2625350a04e0d338c620c28a3d0cd67b 188 SUPERFAMILY SSF46689 3 66 3.99E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_39480 2625350a04e0d338c620c28a3d0cd67b 188 Gene3D G3DSA:1.10.357.10 2 184 2.6E-15 T 14-10-2018 AMIS_39480 2625350a04e0d338c620c28a3d0cd67b 188 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 54 1.6E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_43050 050cce7d00c1609465aefc3c37ee426b 539 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 235 525 4.4E-32 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMIS_43050 050cce7d00c1609465aefc3c37ee426b 539 Gene3D G3DSA:3.50.50.60 347 468 7.9E-86 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_43050 050cce7d00c1609465aefc3c37ee426b 539 Gene3D G3DSA:3.50.50.60 237 529 7.9E-86 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_43050 050cce7d00c1609465aefc3c37ee426b 539 Gene3D G3DSA:2.60.120.10 22 146 2.3E-10 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMIS_43050 050cce7d00c1609465aefc3c37ee426b 539 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 255 7.0E-20 T 14-10-2018 AMIS_43050 050cce7d00c1609465aefc3c37ee426b 539 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 378 396 7.0E-20 T 14-10-2018 AMIS_43050 050cce7d00c1609465aefc3c37ee426b 539 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 335 353 7.0E-20 T 14-10-2018 AMIS_43050 050cce7d00c1609465aefc3c37ee426b 539 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 489 511 7.0E-20 T 14-10-2018 AMIS_43050 050cce7d00c1609465aefc3c37ee426b 539 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 460 476 7.0E-20 T 14-10-2018 AMIS_43050 050cce7d00c1609465aefc3c37ee426b 539 SUPERFAMILY SSF51206 27 139 1.57E-11 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like AMIS_43050 050cce7d00c1609465aefc3c37ee426b 539 SUPERFAMILY SSF51905 234 534 5.61E-37 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_43050 050cce7d00c1609465aefc3c37ee426b 539 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 268 283 6.0E-38 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMIS_43050 050cce7d00c1609465aefc3c37ee426b 539 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 235 257 6.0E-38 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMIS_43050 050cce7d00c1609465aefc3c37ee426b 539 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 336 344 6.0E-38 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMIS_43050 050cce7d00c1609465aefc3c37ee426b 539 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 374 398 6.0E-38 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMIS_43050 050cce7d00c1609465aefc3c37ee426b 539 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 499 517 6.0E-38 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMIS_43050 050cce7d00c1609465aefc3c37ee426b 539 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 428 444 6.0E-38 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMIS_43050 050cce7d00c1609465aefc3c37ee426b 539 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 462 483 6.0E-38 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMIS_43050 050cce7d00c1609465aefc3c37ee426b 539 SMART SM00100 23 137 6.8E-4 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain AMIS_68040 e00f511ed371aa993acd328b2d62374d 208 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 70 139 4.6E-12 T 14-10-2018 AMIS_68040 e00f511ed371aa993acd328b2d62374d 208 SUPERFAMILY SSF53335 42 175 1.06E-24 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_68040 e00f511ed371aa993acd328b2d62374d 208 Gene3D G3DSA:3.40.50.150 47 198 3.8E-21 T 14-10-2018 AMIS_52910 c52397a64f563269c4ddfd49ce5bf547 347 Pfam PF01497 Periplasmic binding protein 73 319 1.4E-19 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain AMIS_52910 c52397a64f563269c4ddfd49ce5bf547 347 SUPERFAMILY SSF53807 60 333 8.24E-28 T 14-10-2018 AMIS_52910 c52397a64f563269c4ddfd49ce5bf547 347 Gene3D G3DSA:3.40.50.1980 197 343 4.7E-53 T 14-10-2018 AMIS_52910 c52397a64f563269c4ddfd49ce5bf547 347 Gene3D G3DSA:3.40.50.1980 51 190 3.1E-45 T 14-10-2018 AMIS_17450 5c9380eb9367d78701ad992c79f8d168 548 PIRSF PIRSF001294 1 548 2.5E-218 T 14-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 AMIS_17450 5c9380eb9367d78701ad992c79f8d168 548 Pfam PF03814 Potassium-transporting ATPase A subunit 10 547 4.1E-231 T 14-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 AMIS_17450 5c9380eb9367d78701ad992c79f8d168 548 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 1 548 31.791 T 14-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 AMIS_17450 5c9380eb9367d78701ad992c79f8d168 548 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 2 548 4.2E-207 T 14-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 AMIS_69560 9c2b3fb13ab7ac4fe106d0023f336cfe 310 Gene3D G3DSA:3.40.50.620 1 185 1.6E-62 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMIS_69560 9c2b3fb13ab7ac4fe106d0023f336cfe 310 Pfam PF01687 Riboflavin kinase 184 308 5.3E-35 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 AMIS_69560 9c2b3fb13ab7ac4fe106d0023f336cfe 310 SMART SM00904 183 310 1.2E-52 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 AMIS_69560 9c2b3fb13ab7ac4fe106d0023f336cfe 310 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 19 309 1.0E-72 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 AMIS_69560 9c2b3fb13ab7ac4fe106d0023f336cfe 310 Gene3D G3DSA:2.40.30.30 186 310 2.0E-43 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 AMIS_69560 9c2b3fb13ab7ac4fe106d0023f336cfe 310 PIRSF PIRSF004491 1 310 3.1E-100 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 AMIS_69560 9c2b3fb13ab7ac4fe106d0023f336cfe 310 SUPERFAMILY SSF82114 174 310 3.49E-41 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 AMIS_69560 9c2b3fb13ab7ac4fe106d0023f336cfe 310 Pfam PF06574 FAD synthetase 16 166 2.5E-52 T 14-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 AMIS_69560 9c2b3fb13ab7ac4fe106d0023f336cfe 310 SUPERFAMILY SSF52374 16 176 1.16E-33 T 14-10-2018 AMIS_52280 482563e0a71d57a04a6e17e35f8bff7a 308 Pfam PF05726 Pirin C-terminal cupin domain 183 274 1.5E-18 T 14-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 AMIS_52280 482563e0a71d57a04a6e17e35f8bff7a 308 PIRSF PIRSF006232 8 285 1.9E-77 T 14-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 AMIS_52280 482563e0a71d57a04a6e17e35f8bff7a 308 Gene3D G3DSA:2.60.120.10 12 250 7.1E-64 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMIS_52280 482563e0a71d57a04a6e17e35f8bff7a 308 Pfam PF02678 Pirin 25 125 8.2E-30 T 14-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 AMIS_52280 482563e0a71d57a04a6e17e35f8bff7a 308 SUPERFAMILY SSF51182 22 283 9.71E-72 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily AMIS_15260 6fda293cf56d0cf31b741a5b48c98ac4 373 Gene3D G3DSA:3.40.50.1440 1 217 1.2E-80 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 AMIS_15260 6fda293cf56d0cf31b741a5b48c98ac4 373 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 8 313 1.9E-127 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 AMIS_15260 6fda293cf56d0cf31b741a5b48c98ac4 373 PRINTS PR00423 Cell division protein FtsZ signature 186 208 8.8E-51 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AMIS_15260 6fda293cf56d0cf31b741a5b48c98ac4 373 PRINTS PR00423 Cell division protein FtsZ signature 95 115 8.8E-51 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AMIS_15260 6fda293cf56d0cf31b741a5b48c98ac4 373 PRINTS PR00423 Cell division protein FtsZ signature 209 230 8.8E-51 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AMIS_15260 6fda293cf56d0cf31b741a5b48c98ac4 373 PRINTS PR00423 Cell division protein FtsZ signature 123 144 8.8E-51 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AMIS_15260 6fda293cf56d0cf31b741a5b48c98ac4 373 SUPERFAMILY SSF52490 9 205 2.75E-66 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 AMIS_15260 6fda293cf56d0cf31b741a5b48c98ac4 373 Gene3D G3DSA:3.30.1330.20 218 322 2.1E-39 T 14-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 AMIS_15260 6fda293cf56d0cf31b741a5b48c98ac4 373 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 6 372 38.107 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 AMIS_15260 6fda293cf56d0cf31b741a5b48c98ac4 373 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 11 168 5.6E-37 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AMIS_15260 6fda293cf56d0cf31b741a5b48c98ac4 373 ProSitePatterns PS01134 FtsZ protein signature 1. 41 75 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 AMIS_15260 6fda293cf56d0cf31b741a5b48c98ac4 373 SMART SM00864 10 202 1.4E-106 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AMIS_15260 6fda293cf56d0cf31b741a5b48c98ac4 373 Pfam PF12327 FtsZ family, C-terminal domain 219 313 9.6E-36 T 14-10-2018 IPR024757 Cell division protein FtsZ, C-terminal AMIS_15260 6fda293cf56d0cf31b741a5b48c98ac4 373 SUPERFAMILY SSF55307 201 315 1.95E-44 T 14-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 AMIS_15260 6fda293cf56d0cf31b741a5b48c98ac4 373 SMART SM00865 204 321 7.4E-56 T 14-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 AMIS_15260 6fda293cf56d0cf31b741a5b48c98ac4 373 ProSitePatterns PS01135 FtsZ protein signature 2. 94 115 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 AMIS_60610 5aa1cd50cdb81dcaf1541732e0718ba6 404 Pfam PF02803 Thiolase, C-terminal domain 282 403 1.6E-47 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 AMIS_60610 5aa1cd50cdb81dcaf1541732e0718ba6 404 SUPERFAMILY SSF53901 282 403 4.84E-46 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_60610 5aa1cd50cdb81dcaf1541732e0718ba6 404 Gene3D G3DSA:3.40.47.10 127 399 3.1E-142 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_60610 5aa1cd50cdb81dcaf1541732e0718ba6 404 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 89 107 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 AMIS_60610 5aa1cd50cdb81dcaf1541732e0718ba6 404 ProSitePatterns PS00099 Thiolases active site. 385 398 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 AMIS_60610 5aa1cd50cdb81dcaf1541732e0718ba6 404 SUPERFAMILY SSF53901 3 274 3.26E-60 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_60610 5aa1cd50cdb81dcaf1541732e0718ba6 404 ProSitePatterns PS00737 Thiolases signature 2. 350 366 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 AMIS_60610 5aa1cd50cdb81dcaf1541732e0718ba6 404 Gene3D G3DSA:3.40.47.10 7 301 3.1E-142 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_60610 5aa1cd50cdb81dcaf1541732e0718ba6 404 Pfam PF00108 Thiolase, N-terminal domain 6 227 6.7E-44 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 AMIS_60610 5aa1cd50cdb81dcaf1541732e0718ba6 404 PIRSF PIRSF000429 1 404 1.4E-111 T 14-10-2018 IPR002155 Thiolase GO:0016747 AMIS_60610 5aa1cd50cdb81dcaf1541732e0718ba6 404 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 402 2.2E-129 T 14-10-2018 IPR002155 Thiolase GO:0016747 AMIS_2010 0576b19d929b01b4b21caf0d3634ac8a 571 SUPERFAMILY SSF52540 84 364 1.53E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_2010 0576b19d929b01b4b21caf0d3634ac8a 571 SMART SM00490 265 346 3.5E-30 T 14-10-2018 IPR001650 Helicase, C-terminal AMIS_2010 0576b19d929b01b4b21caf0d3634ac8a 571 Pfam PF00271 Helicase conserved C-terminal domain 249 346 1.6E-24 T 14-10-2018 IPR001650 Helicase, C-terminal AMIS_2010 0576b19d929b01b4b21caf0d3634ac8a 571 Gene3D G3DSA:3.40.50.300 242 393 3.1E-43 T 14-10-2018 AMIS_2010 0576b19d929b01b4b21caf0d3634ac8a 571 Pfam PF00270 DEAD/DEAH box helicase 36 204 8.0E-43 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMIS_2010 0576b19d929b01b4b21caf0d3634ac8a 571 SMART SM00487 30 231 2.8E-50 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMIS_2010 0576b19d929b01b4b21caf0d3634ac8a 571 Gene3D G3DSA:3.40.50.300 1 217 1.6E-69 T 14-10-2018 AMIS_2950 0f75448d200690159bed556ec902a0da 512 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 7 494 1.9E-159 T 14-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_2950 0f75448d200690159bed556ec902a0da 512 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 140 159 2.6E-32 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_2950 0f75448d200690159bed556ec902a0da 512 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 330 349 2.6E-32 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_2950 0f75448d200690159bed556ec902a0da 512 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 242 266 2.6E-32 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_2950 0f75448d200690159bed556ec902a0da 512 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 382 408 2.6E-32 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_2950 0f75448d200690159bed556ec902a0da 512 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 170 194 2.6E-32 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_2950 0f75448d200690159bed556ec902a0da 512 Pfam PF00361 Proton-conducting membrane transporter 134 423 2.0E-57 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_72780 bc7affc796c07b1cfc4ddb3a0e63901e 1250 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 134 368 4.7E-52 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 AMIS_72780 bc7affc796c07b1cfc4ddb3a0e63901e 1250 SUPERFAMILY SSF52518 892 1104 2.26E-44 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold AMIS_72780 bc7affc796c07b1cfc4ddb3a0e63901e 1250 Gene3D G3DSA:3.40.50.11610 1041 1245 7.2E-163 T 14-10-2018 AMIS_72780 bc7affc796c07b1cfc4ddb3a0e63901e 1250 Pfam PF02779 Transketolase, pyrimidine binding domain 905 1099 1.2E-55 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AMIS_72780 bc7affc796c07b1cfc4ddb3a0e63901e 1250 Gene3D G3DSA:1.10.287.1150 400 481 8.3E-28 T 14-10-2018 AMIS_72780 bc7affc796c07b1cfc4ddb3a0e63901e 1250 Gene3D G3DSA:3.40.50.12470 864 1120 7.2E-163 T 14-10-2018 AMIS_72780 bc7affc796c07b1cfc4ddb3a0e63901e 1250 PIRSF PIRSF000157 10 1249 0.0 T 14-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AMIS_72780 bc7affc796c07b1cfc4ddb3a0e63901e 1250 Gene3D G3DSA:3.30.559.10 118 375 1.2E-53 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AMIS_72780 bc7affc796c07b1cfc4ddb3a0e63901e 1250 SMART SM00861 905 1098 1.4E-45 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AMIS_72780 bc7affc796c07b1cfc4ddb3a0e63901e 1250 Pfam PF00676 Dehydrogenase E1 component 526 840 7.8E-57 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 AMIS_72780 bc7affc796c07b1cfc4ddb3a0e63901e 1250 Gene3D G3DSA:3.40.50.970 482 845 1.2E-146 T 14-10-2018 AMIS_72780 bc7affc796c07b1cfc4ddb3a0e63901e 1250 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 402 1244 0.0 T 14-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AMIS_72780 bc7affc796c07b1cfc4ddb3a0e63901e 1250 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 26 59 1.1E-10 T 14-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AMIS_72780 bc7affc796c07b1cfc4ddb3a0e63901e 1250 SUPERFAMILY SSF52777 123 368 8.01E-55 T 14-10-2018 AMIS_72780 bc7affc796c07b1cfc4ddb3a0e63901e 1250 SUPERFAMILY SSF52518 437 841 1.12E-85 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold AMIS_72780 bc7affc796c07b1cfc4ddb3a0e63901e 1250 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 1103 1246 2.8E-47 T 14-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AMIS_10830 384a9b8c7ec6bee01af21ad6efcda96d 731 Gene3D G3DSA:3.40.50.300 1 179 5.7E-20 T 14-10-2018 AMIS_10830 384a9b8c7ec6bee01af21ad6efcda96d 731 SUPERFAMILY SSF52540 1 175 3.64E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_10830 384a9b8c7ec6bee01af21ad6efcda96d 731 SUPERFAMILY SSF52317 260 435 2.21E-13 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_10830 384a9b8c7ec6bee01af21ad6efcda96d 731 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 173 3.6E-13 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AMIS_10830 384a9b8c7ec6bee01af21ad6efcda96d 731 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 266 423 6.9E-6 T 14-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 AMIS_8430 4ca88fc45de3d94817403615ff04f077 361 Gene3D G3DSA:1.10.10.10 11 56 5.5E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_8430 4ca88fc45de3d94817403615ff04f077 361 Pfam PF13404 AsnC-type helix-turn-helix domain 185 221 1.5E-10 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMIS_8430 4ca88fc45de3d94817403615ff04f077 361 Pfam PF13404 AsnC-type helix-turn-helix domain 11 51 2.5E-11 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMIS_8430 4ca88fc45de3d94817403615ff04f077 361 SUPERFAMILY SSF54909 240 315 9.39E-6 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel AMIS_8430 4ca88fc45de3d94817403615ff04f077 361 SMART SM00344 181 286 6.1E-5 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AMIS_8430 4ca88fc45de3d94817403615ff04f077 361 SMART SM00344 11 116 7.1E-4 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AMIS_8430 4ca88fc45de3d94817403615ff04f077 361 SUPERFAMILY SSF54909 72 155 2.68E-7 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel AMIS_8430 4ca88fc45de3d94817403615ff04f077 361 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 208 227 1.1E-5 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMIS_8430 4ca88fc45de3d94817403615ff04f077 361 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 181 197 1.1E-5 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMIS_8430 4ca88fc45de3d94817403615ff04f077 361 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 197 208 1.1E-5 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMIS_8430 4ca88fc45de3d94817403615ff04f077 361 Pfam PF01037 Lrp/AsnC ligand binding domain 76 145 2.0E-6 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMIS_8430 4ca88fc45de3d94817403615ff04f077 361 SUPERFAMILY SSF46785 180 224 4.45E-6 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_8430 4ca88fc45de3d94817403615ff04f077 361 Gene3D G3DSA:3.30.70.920 235 320 1.8E-6 T 14-10-2018 AMIS_8430 4ca88fc45de3d94817403615ff04f077 361 SUPERFAMILY SSF46785 10 55 6.68E-5 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_8430 4ca88fc45de3d94817403615ff04f077 361 Gene3D G3DSA:1.10.10.10 179 228 1.9E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_8430 4ca88fc45de3d94817403615ff04f077 361 Gene3D G3DSA:3.30.70.920 73 147 2.6E-7 T 14-10-2018 AMIS_11510 5ad4eff47ccfeb3039d4f79df1ee5047 193 Gene3D G3DSA:3.40.50.620 1 192 7.6E-56 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMIS_11510 5ad4eff47ccfeb3039d4f79df1ee5047 193 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 1 184 4.4E-50 T 14-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 AMIS_11510 5ad4eff47ccfeb3039d4f79df1ee5047 193 SUPERFAMILY SSF52374 1 185 2.66E-47 T 14-10-2018 AMIS_11510 5ad4eff47ccfeb3039d4f79df1ee5047 193 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 1 185 26.138 T 14-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 AMIS_11510 5ad4eff47ccfeb3039d4f79df1ee5047 193 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 2 60 1.5E-9 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AMIS_11510 5ad4eff47ccfeb3039d4f79df1ee5047 193 Pfam PF01467 Cytidylyltransferase-like 2 159 1.3E-24 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AMIS_75870 0e61941fc79689f815fb083cd3074b51 314 Pfam PF08281 Sigma-70, region 4 253 304 7.1E-12 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_75870 0e61941fc79689f815fb083cd3074b51 314 Pfam PF04542 Sigma-70 region 2 150 216 4.6E-16 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_75870 0e61941fc79689f815fb083cd3074b51 314 SUPERFAMILY SSF88946 130 232 2.35E-24 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_75870 0e61941fc79689f815fb083cd3074b51 314 TIGRFAM TIGR02952 Sig70_famx2: RNA polymerase sigma-70 factor, TIGR02952 family 135 308 2.5E-62 T 14-10-2018 IPR014298 RNA polymerase sigma-X type AMIS_75870 0e61941fc79689f815fb083cd3074b51 314 SUPERFAMILY SSF88659 240 308 5.42E-13 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_75870 0e61941fc79689f815fb083cd3074b51 314 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 146 306 3.5E-25 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_75870 0e61941fc79689f815fb083cd3074b51 314 Gene3D G3DSA:1.10.1740.10 125 214 2.5E-25 T 14-10-2018 AMIS_75870 0e61941fc79689f815fb083cd3074b51 314 Gene3D G3DSA:1.10.10.10 228 311 1.1E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_34480 4aedbb6761591ae1a11d24c6cca37106 284 Pfam PF01904 Protein of unknown function DUF72 22 255 1.4E-51 T 14-10-2018 IPR002763 Protein of unknown function DUF72 AMIS_34480 4aedbb6761591ae1a11d24c6cca37106 284 SUPERFAMILY SSF117396 1 258 2.75E-65 T 14-10-2018 IPR036520 UPF0759 superfamily AMIS_34480 4aedbb6761591ae1a11d24c6cca37106 284 Gene3D G3DSA:3.20.20.410 1 260 2.0E-42 T 14-10-2018 IPR036520 UPF0759 superfamily AMIS_50540 08d5df481583fb1247434dd77abab0e7 402 Pfam PF01757 Acyltransferase family 12 347 2.2E-23 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 AMIS_65500 32e62051a369ea6ef805beb0acd3b184 175 SMART SM00862 93 164 2.8E-25 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_65500 32e62051a369ea6ef805beb0acd3b184 175 Gene3D G3DSA:1.10.10.10 76 171 1.3E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_65500 32e62051a369ea6ef805beb0acd3b184 175 SUPERFAMILY SSF46894 76 165 2.83E-27 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_65500 32e62051a369ea6ef805beb0acd3b184 175 Pfam PF00486 Transcriptional regulatory protein, C terminal 95 164 5.4E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_61140 74259cf95cea43cf2c32b3d3e2484260 103 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 12 93 3.3E-12 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AMIS_61140 74259cf95cea43cf2c32b3d3e2484260 103 SUPERFAMILY SSF52794 10 96 1.05E-19 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 AMIS_61140 74259cf95cea43cf2c32b3d3e2484260 103 Gene3D G3DSA:3.40.50.2300 2 99 4.0E-28 T 14-10-2018 AMIS_44310 534028b5a3d9484b52ed58797ae67ca3 411 Gene3D G3DSA:3.40.47.10 262 410 1.6E-45 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_44310 534028b5a3d9484b52ed58797ae67ca3 411 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 258 368 3.9E-29 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal AMIS_44310 534028b5a3d9484b52ed58797ae67ca3 411 SUPERFAMILY SSF53901 5 254 1.3E-65 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_44310 534028b5a3d9484b52ed58797ae67ca3 411 SMART SM00825 Beta-ketoacyl synthase 6 402 7.4E-14 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMIS_44310 534028b5a3d9484b52ed58797ae67ca3 411 SUPERFAMILY SSF53901 217 409 2.27E-62 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_44310 534028b5a3d9484b52ed58797ae67ca3 411 Gene3D G3DSA:3.40.47.10 1 258 2.3E-77 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_44310 534028b5a3d9484b52ed58797ae67ca3 411 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 5 247 1.1E-58 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AMIS_77310 4bf522a4d12c3673e51385d831d281ba 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 14-10-2018 IPR019844 Cold-shock conserved site AMIS_77310 4bf522a4d12c3673e51385d831d281ba 67 PIRSF PIRSF002599 1 67 6.1E-26 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 AMIS_77310 4bf522a4d12c3673e51385d831d281ba 67 PRINTS PR00050 Cold shock protein signature 4 19 1.1E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMIS_77310 4bf522a4d12c3673e51385d831d281ba 67 PRINTS PR00050 Cold shock protein signature 40 58 1.1E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMIS_77310 4bf522a4d12c3673e51385d831d281ba 67 PRINTS PR00050 Cold shock protein signature 25 34 1.1E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMIS_77310 4bf522a4d12c3673e51385d831d281ba 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 6.7E-32 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMIS_77310 4bf522a4d12c3673e51385d831d281ba 67 Gene3D G3DSA:2.40.50.140 1 65 1.3E-30 T 14-10-2018 AMIS_77310 4bf522a4d12c3673e51385d831d281ba 67 SMART SM00357 3 67 1.2E-31 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 AMIS_77310 4bf522a4d12c3673e51385d831d281ba 67 SUPERFAMILY SSF50249 1 66 5.78E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMIS_81240 c9923e97dc55613bc8e9ee5e34c7d973 118 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 4 108 4.8E-16 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AMIS_81240 c9923e97dc55613bc8e9ee5e34c7d973 118 Gene3D G3DSA:3.30.230.10 1 115 4.7E-24 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMIS_81240 c9923e97dc55613bc8e9ee5e34c7d973 118 Pfam PF00825 Ribonuclease P 3 110 5.9E-27 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AMIS_81240 c9923e97dc55613bc8e9ee5e34c7d973 118 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 2 114 16.519 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AMIS_81240 c9923e97dc55613bc8e9ee5e34c7d973 118 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 54 68 - T 14-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 AMIS_81240 c9923e97dc55613bc8e9ee5e34c7d973 118 SUPERFAMILY SSF54211 4 112 8.6E-24 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMIS_77390 0aed4574249820f5155e634fa7ab2194 552 Pfam PF05681 Fumarate hydratase (Fumerase) 51 332 7.4E-84 T 14-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 AMIS_77390 0aed4574249820f5155e634fa7ab2194 552 Gene3D G3DSA:3.20.130.10 355 540 9.7E-58 T 14-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 AMIS_77390 0aed4574249820f5155e634fa7ab2194 552 Pfam PF05683 Fumarase C-terminus 338 541 4.7E-92 T 14-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AMIS_77390 0aed4574249820f5155e634fa7ab2194 552 PIRSF PIRSF001394 32 549 2.6E-213 T 14-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 AMIS_77390 0aed4574249820f5155e634fa7ab2194 552 ProSitePatterns PS00163 Fumarate lyases signature. 460 469 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AMIS_77390 0aed4574249820f5155e634fa7ab2194 552 SUPERFAMILY SSF117457 365 539 9.02E-61 T 14-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 AMIS_77390 0aed4574249820f5155e634fa7ab2194 552 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 377 541 5.0E-58 T 14-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AMIS_29270 61468c0b3b162688e4cf896c10e1e67e 529 Gene3D G3DSA:3.30.920.50 232 348 1.5E-106 T 14-10-2018 AMIS_29270 61468c0b3b162688e4cf896c10e1e67e 529 SMART SM00458 402 529 2.8E-24 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_29270 61468c0b3b162688e4cf896c10e1e67e 529 SUPERFAMILY SSF50370 405 527 3.93E-32 T 14-10-2018 IPR035992 Ricin B-like lectins AMIS_29270 61468c0b3b162688e4cf896c10e1e67e 529 Pfam PF16483 Beta-1,3-glucanase 35 389 1.3E-96 T 14-10-2018 IPR032477 Beta-1,3-glucanase, N-terminal KEGG: 00500+3.2.1.39 AMIS_29270 61468c0b3b162688e4cf896c10e1e67e 529 Gene3D G3DSA:2.60.110.10 39 373 1.5E-106 T 14-10-2018 IPR037176 Osmotin/thaumatin-like superfamily AMIS_29270 61468c0b3b162688e4cf896c10e1e67e 529 Pfam PF00652 Ricin-type beta-trefoil lectin domain 411 526 6.4E-22 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_29270 61468c0b3b162688e4cf896c10e1e67e 529 Gene3D G3DSA:2.80.10.50 445 528 1.7E-21 T 14-10-2018 AMIS_29270 61468c0b3b162688e4cf896c10e1e67e 529 Gene3D G3DSA:2.80.10.50 378 444 2.8E-10 T 14-10-2018 AMIS_67080 3cc7c31b1b54d285cb130cd85056cfc9 395 SUPERFAMILY SSF116734 244 385 3.43E-18 T 14-10-2018 AMIS_67080 3cc7c31b1b54d285cb130cd85056cfc9 395 Gene3D G3DSA:3.90.220.20 200 381 2.6E-17 T 14-10-2018 AMIS_67080 3cc7c31b1b54d285cb130cd85056cfc9 395 Gene3D G3DSA:3.90.220.20 2 196 2.2E-26 T 14-10-2018 AMIS_67080 3cc7c31b1b54d285cb130cd85056cfc9 395 SUPERFAMILY SSF116734 3 192 1.39E-27 T 14-10-2018 AMIS_67080 3cc7c31b1b54d285cb130cd85056cfc9 395 Pfam PF01420 Type I restriction modification DNA specificity domain 1 182 2.3E-13 T 14-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 AMIS_78700 4b5c64c564acc1a7e300eec5a878341b 1102 SMART SM00387 508 618 8.1E-6 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_78700 4b5c64c564acc1a7e300eec5a878341b 1102 SUPERFAMILY SSF55874 494 616 2.36E-17 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_78700 4b5c64c564acc1a7e300eec5a878341b 1102 Pfam PF00672 HAMP domain 325 392 4.9E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_78700 4b5c64c564acc1a7e300eec5a878341b 1102 Gene3D G3DSA:3.30.565.10 478 620 2.2E-14 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_78700 4b5c64c564acc1a7e300eec5a878341b 1102 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 513 615 1.5E-5 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_78700 4b5c64c564acc1a7e300eec5a878341b 1102 SMART SM00304 325 396 2.1E-4 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_78700 4b5c64c564acc1a7e300eec5a878341b 1102 Pfam PF08376 Nitrate and nitrite sensing 60 234 1.1E-8 T 14-10-2018 IPR013587 Nitrate/nitrite sensing protein AMIS_41070 aae3c4c10a8e8dac51feb6aac5a04bb7 390 Gene3D G3DSA:3.40.50.1820 4 383 1.4E-134 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_41070 aae3c4c10a8e8dac51feb6aac5a04bb7 390 Pfam PF06441 Epoxide hydrolase N terminus 5 109 5.2E-34 T 14-10-2018 IPR010497 Epoxide hydrolase, N-terminal Reactome: R-HSA-211945 AMIS_41070 aae3c4c10a8e8dac51feb6aac5a04bb7 390 PRINTS PR00412 Epoxide hydrolase signature 129 144 7.9E-12 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_41070 aae3c4c10a8e8dac51feb6aac5a04bb7 390 PRINTS PR00412 Epoxide hydrolase signature 351 373 7.9E-12 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_41070 aae3c4c10a8e8dac51feb6aac5a04bb7 390 PRINTS PR00412 Epoxide hydrolase signature 100 118 7.9E-12 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_41070 aae3c4c10a8e8dac51feb6aac5a04bb7 390 PRINTS PR00412 Epoxide hydrolase signature 174 187 7.9E-12 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_41070 aae3c4c10a8e8dac51feb6aac5a04bb7 390 PIRSF PIRSF001112 1 380 2.1E-107 T 14-10-2018 IPR016292 Epoxide hydrolase GO:0033961 Reactome: R-HSA-211945 AMIS_41070 aae3c4c10a8e8dac51feb6aac5a04bb7 390 SUPERFAMILY SSF53474 4 377 5.04E-95 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_6670 d3520499c54a462dacaf2be0a625bf43 353 PRINTS PR00111 Alpha/beta hydrolase fold signature 155 168 7.4E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_6670 d3520499c54a462dacaf2be0a625bf43 353 PRINTS PR00111 Alpha/beta hydrolase fold signature 109 124 7.4E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_6670 d3520499c54a462dacaf2be0a625bf43 353 Pfam PF00561 alpha/beta hydrolase fold 82 337 1.8E-26 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_6670 d3520499c54a462dacaf2be0a625bf43 353 Gene3D G3DSA:3.40.50.1820 55 352 1.5E-57 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_6670 d3520499c54a462dacaf2be0a625bf43 353 SUPERFAMILY SSF53474 53 350 5.14E-56 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_6670 d3520499c54a462dacaf2be0a625bf43 353 PRINTS PR00412 Epoxide hydrolase signature 109 124 9.2E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_6670 d3520499c54a462dacaf2be0a625bf43 353 PRINTS PR00412 Epoxide hydrolase signature 88 106 9.2E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_6670 d3520499c54a462dacaf2be0a625bf43 353 PRINTS PR00412 Epoxide hydrolase signature 293 309 9.2E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_6670 d3520499c54a462dacaf2be0a625bf43 353 PRINTS PR00412 Epoxide hydrolase signature 326 348 9.2E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_11600 17483c411c79dfcece2bb336a688782a 327 SUPERFAMILY SSF48019 201 319 1.53E-13 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AMIS_11600 17483c411c79dfcece2bb336a688782a 327 Pfam PF06144 DNA polymerase III, delta subunit 14 173 5.5E-7 T 14-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 AMIS_11600 17483c411c79dfcece2bb336a688782a 327 Gene3D G3DSA:3.40.50.300 3 123 2.2E-9 T 14-10-2018 AMIS_11600 17483c411c79dfcece2bb336a688782a 327 SUPERFAMILY SSF52540 8 190 2.79E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_11600 17483c411c79dfcece2bb336a688782a 327 Gene3D G3DSA:1.20.272.10 198 324 6.1E-16 T 14-10-2018 AMIS_11600 17483c411c79dfcece2bb336a688782a 327 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 11 316 7.6E-29 T 14-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 AMIS_24030 03366a64ef486c687d71a8ee8a07622d 227 SUPERFAMILY SSF46894 139 219 2.69E-22 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_24030 03366a64ef486c687d71a8ee8a07622d 227 Pfam PF00196 Bacterial regulatory proteins, luxR family 158 212 1.4E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_24030 03366a64ef486c687d71a8ee8a07622d 227 SUPERFAMILY SSF52172 6 138 1.27E-33 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_24030 03366a64ef486c687d71a8ee8a07622d 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 158 172 2.5E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_24030 03366a64ef486c687d71a8ee8a07622d 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 188 2.5E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_24030 03366a64ef486c687d71a8ee8a07622d 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 188 200 2.5E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_24030 03366a64ef486c687d71a8ee8a07622d 227 Pfam PF00072 Response regulator receiver domain 8 119 8.5E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_24030 03366a64ef486c687d71a8ee8a07622d 227 Gene3D G3DSA:3.40.50.12740 6 218 1.2E-71 T 14-10-2018 AMIS_24030 03366a64ef486c687d71a8ee8a07622d 227 SMART SM00448 6 119 1.1E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_24030 03366a64ef486c687d71a8ee8a07622d 227 ProSitePatterns PS00622 LuxR-type HTH domain signature. 172 199 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_24030 03366a64ef486c687d71a8ee8a07622d 227 SMART SM00421 155 212 4.8E-23 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_31350 3928b40db425aab04e699f1ce1c759e0 249 Gene3D G3DSA:3.40.50.720 1 248 5.2E-76 T 14-10-2018 AMIS_31350 3928b40db425aab04e699f1ce1c759e0 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 246 5.0E-61 T 14-10-2018 AMIS_31350 3928b40db425aab04e699f1ce1c759e0 249 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 187 0.0023 T 14-10-2018 AMIS_31350 3928b40db425aab04e699f1ce1c759e0 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 5.9E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_31350 3928b40db425aab04e699f1ce1c759e0 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 5.9E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_31350 3928b40db425aab04e699f1ce1c759e0 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 5.9E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_31350 3928b40db425aab04e699f1ce1c759e0 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 5.9E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_31350 3928b40db425aab04e699f1ce1c759e0 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 5.9E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_31350 3928b40db425aab04e699f1ce1c759e0 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 5.9E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_31350 3928b40db425aab04e699f1ce1c759e0 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMIS_31350 3928b40db425aab04e699f1ce1c759e0 249 SUPERFAMILY SSF51735 6 246 4.59E-75 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_31350 3928b40db425aab04e699f1ce1c759e0 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 3.9E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_31350 3928b40db425aab04e699f1ce1c759e0 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 3.9E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_31350 3928b40db425aab04e699f1ce1c759e0 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 3.9E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_34920 5c3dad601901c6db5b6f89e6fb535317 173 SUPERFAMILY SSF46785 14 163 6.12E-31 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_34920 5c3dad601901c6db5b6f89e6fb535317 173 Gene3D G3DSA:1.10.10.10 2 164 5.8E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_34920 5c3dad601901c6db5b6f89e6fb535317 173 ProSitePatterns PS01117 MarR-type HTH domain signature. 88 122 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site AMIS_34920 5c3dad601901c6db5b6f89e6fb535317 173 SMART SM00347 46 149 3.3E-20 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_34920 5c3dad601901c6db5b6f89e6fb535317 173 PRINTS PR00598 Bacterial regulatory protein MarR family signature 90 105 3.8E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_34920 5c3dad601901c6db5b6f89e6fb535317 173 PRINTS PR00598 Bacterial regulatory protein MarR family signature 139 159 3.8E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_34920 5c3dad601901c6db5b6f89e6fb535317 173 PRINTS PR00598 Bacterial regulatory protein MarR family signature 109 125 3.8E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_34920 5c3dad601901c6db5b6f89e6fb535317 173 Pfam PF12802 MarR family 55 113 2.4E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_76580 d144aded0e6d1b6a34239d3739ff69c7 232 SMART SM00448 2 112 1.2E-42 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_76580 d144aded0e6d1b6a34239d3739ff69c7 232 SUPERFAMILY SSF46894 148 225 9.18E-16 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_76580 d144aded0e6d1b6a34239d3739ff69c7 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 224 1.9E-18 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_76580 d144aded0e6d1b6a34239d3739ff69c7 232 Gene3D G3DSA:1.10.10.10 130 229 4.0E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_76580 d144aded0e6d1b6a34239d3739ff69c7 232 Gene3D G3DSA:3.40.50.2300 1 129 1.9E-37 T 14-10-2018 AMIS_76580 d144aded0e6d1b6a34239d3739ff69c7 232 SUPERFAMILY SSF52172 2 173 5.69E-41 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_76580 d144aded0e6d1b6a34239d3739ff69c7 232 SMART SM00862 149 225 5.6E-18 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_76580 d144aded0e6d1b6a34239d3739ff69c7 232 Pfam PF00072 Response regulator receiver domain 5 113 8.3E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_63640 2aebf7e5a5445bf579bf88d5a8ca6dfd 261 SUPERFAMILY SSF81923 194 258 1.96E-11 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AMIS_63640 2aebf7e5a5445bf579bf88d5a8ca6dfd 261 SUPERFAMILY SSF81923 3 42 5.1E-8 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AMIS_63640 2aebf7e5a5445bf579bf88d5a8ca6dfd 261 Gene3D G3DSA:1.10.1780.10 135 260 5.4E-32 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AMIS_63640 2aebf7e5a5445bf579bf88d5a8ca6dfd 261 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 137 162 0.12 T 14-10-2018 IPR004176 Clp, N-terminal AMIS_63640 2aebf7e5a5445bf579bf88d5a8ca6dfd 261 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 102 125 0.98 T 14-10-2018 IPR004176 Clp, N-terminal AMIS_63640 2aebf7e5a5445bf579bf88d5a8ca6dfd 261 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 207 256 6.4E-12 T 14-10-2018 IPR004176 Clp, N-terminal AMIS_63640 2aebf7e5a5445bf579bf88d5a8ca6dfd 261 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 16 41 3.8E-7 T 14-10-2018 IPR004176 Clp, N-terminal AMIS_14720 2aaf1ff49a8de7d20bca34e48f7c917d 321 Gene3D G3DSA:1.10.10.10 1 80 1.2E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_14720 2aaf1ff49a8de7d20bca34e48f7c917d 321 SUPERFAMILY SSF53850 126 303 3.94E-19 T 14-10-2018 AMIS_14720 2aaf1ff49a8de7d20bca34e48f7c917d 321 Pfam PF03466 LysR substrate binding domain 125 299 2.8E-19 T 14-10-2018 IPR005119 LysR, substrate-binding AMIS_14720 2aaf1ff49a8de7d20bca34e48f7c917d 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.8E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_14720 2aaf1ff49a8de7d20bca34e48f7c917d 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.8E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_14720 2aaf1ff49a8de7d20bca34e48f7c917d 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.8E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_14720 2aaf1ff49a8de7d20bca34e48f7c917d 321 Gene3D G3DSA:3.40.190.10 199 296 2.5E-23 T 14-10-2018 AMIS_14720 2aaf1ff49a8de7d20bca34e48f7c917d 321 Gene3D G3DSA:3.40.190.10 130 302 2.5E-23 T 14-10-2018 AMIS_14720 2aaf1ff49a8de7d20bca34e48f7c917d 321 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 60 4.3E-21 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_14720 2aaf1ff49a8de7d20bca34e48f7c917d 321 SUPERFAMILY SSF46785 2 104 1.81E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_39700 017aaca80f5a9c9abe008ab2b02bcc7f 423 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 3 139 1.2E-18 T 14-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 AMIS_39700 017aaca80f5a9c9abe008ab2b02bcc7f 423 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 144 396 4.5E-18 T 14-10-2018 IPR032095 Saccharopine dehydrogenase, C-terminal Reactome: R-HSA-71064 AMIS_39700 017aaca80f5a9c9abe008ab2b02bcc7f 423 Gene3D G3DSA:3.40.50.720 4 399 2.5E-142 T 14-10-2018 AMIS_39700 017aaca80f5a9c9abe008ab2b02bcc7f 423 Gene3D G3DSA:3.30.360.10 154 356 2.5E-142 T 14-10-2018 AMIS_39700 017aaca80f5a9c9abe008ab2b02bcc7f 423 SUPERFAMILY SSF51735 1 168 2.28E-16 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_14270 a839a39ed4da9b7ed0d365e9085576c2 187 Gene3D G3DSA:3.90.79.10 22 159 6.8E-22 T 14-10-2018 AMIS_14270 a839a39ed4da9b7ed0d365e9085576c2 187 ProSitePatterns PS00893 Nudix box signature. 70 91 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMIS_14270 a839a39ed4da9b7ed0d365e9085576c2 187 Pfam PF00293 NUDIX domain 36 151 1.9E-16 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMIS_14270 a839a39ed4da9b7ed0d365e9085576c2 187 SUPERFAMILY SSF55811 31 158 3.93E-22 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMIS_64580 a275f326a911faf4d0daf11a148efb48 333 PIRSF PIRSF015753 2 304 8.4E-108 T 14-10-2018 IPR016639 Glutathione S-transferase Omega/GSH GO:0004364 AMIS_64580 a275f326a911faf4d0daf11a148efb48 333 Pfam PF13409 Glutathione S-transferase, N-terminal domain 43 132 9.2E-12 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMIS_64580 a275f326a911faf4d0daf11a148efb48 333 Gene3D G3DSA:1.20.1050.10 159 333 3.5E-77 T 14-10-2018 AMIS_64580 a275f326a911faf4d0daf11a148efb48 333 Pfam PF13410 Glutathione S-transferase, C-terminal domain 184 253 4.1E-12 T 14-10-2018 AMIS_64580 a275f326a911faf4d0daf11a148efb48 333 SUPERFAMILY SSF47616 156 321 6.26E-37 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AMIS_64580 a275f326a911faf4d0daf11a148efb48 333 SUPERFAMILY SSF52833 20 92 2.24E-6 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMIS_64580 a275f326a911faf4d0daf11a148efb48 333 Gene3D G3DSA:3.40.30.130 1 158 5.4E-57 T 14-10-2018 AMIS_40570 88d34a70fc70fb5862b3f51bfc0913af 192 Pfam PF13559 Domain of unknown function (DUF4129) 112 180 2.8E-13 T 14-10-2018 IPR025403 Domain of unknown function DUF4129 AMIS_64940 92f6a947adc8fcb2fd52e9546c33c18f 312 Pfam PF14572 Phosphoribosyl synthetase-associated domain 204 311 1.8E-19 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AMIS_64940 92f6a947adc8fcb2fd52e9546c33c18f 312 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 5 311 7.0E-94 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AMIS_64940 92f6a947adc8fcb2fd52e9546c33c18f 312 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 5 120 5.3E-37 T 14-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AMIS_64940 92f6a947adc8fcb2fd52e9546c33c18f 312 SUPERFAMILY SSF53271 4 103 8.78E-5 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like AMIS_64940 92f6a947adc8fcb2fd52e9546c33c18f 312 Gene3D G3DSA:3.40.50.2020 7 300 1.8E-99 T 14-10-2018 AMIS_64940 92f6a947adc8fcb2fd52e9546c33c18f 312 SMART SM01400 4 120 8.5E-58 T 14-10-2018 AMIS_64940 92f6a947adc8fcb2fd52e9546c33c18f 312 Gene3D G3DSA:3.40.50.2020 147 288 1.8E-99 T 14-10-2018 AMIS_64940 92f6a947adc8fcb2fd52e9546c33c18f 312 SUPERFAMILY SSF53271 69 304 1.58E-47 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like AMIS_80910 5f918c4e86be280128d1255a35b44abe 96 Pfam PF01250 Ribosomal protein S6 3 92 3.2E-26 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_80910 5f918c4e86be280128d1255a35b44abe 96 TIGRFAM TIGR00166 S6: ribosomal protein bS6 2 93 1.0E-23 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_80910 5f918c4e86be280128d1255a35b44abe 96 Gene3D G3DSA:3.30.70.60 1 96 1.8E-29 T 14-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 AMIS_80910 5f918c4e86be280128d1255a35b44abe 96 SUPERFAMILY SSF54995 2 94 3.92E-30 T 14-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_80910 5f918c4e86be280128d1255a35b44abe 96 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 95 21.028 T 14-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMIS_13070 155de7a872cb686c3a75304c9cfaf4b4 408 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 5 246 1.5E-54 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AMIS_13070 155de7a872cb686c3a75304c9cfaf4b4 408 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 154 170 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site AMIS_13070 155de7a872cb686c3a75304c9cfaf4b4 408 SMART SM00825 Beta-ketoacyl synthase 6 408 2.1E-12 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMIS_13070 155de7a872cb686c3a75304c9cfaf4b4 408 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 254 365 2.8E-31 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal AMIS_13070 155de7a872cb686c3a75304c9cfaf4b4 408 SUPERFAMILY SSF53901 5 251 1.5E-66 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_13070 155de7a872cb686c3a75304c9cfaf4b4 408 PIRSF PIRSF000447 1 408 6.3E-142 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 AMIS_13070 155de7a872cb686c3a75304c9cfaf4b4 408 Gene3D G3DSA:3.40.47.10 256 397 1.1E-42 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_13070 155de7a872cb686c3a75304c9cfaf4b4 408 SUPERFAMILY SSF53901 214 407 4.37E-63 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_13070 155de7a872cb686c3a75304c9cfaf4b4 408 Gene3D G3DSA:3.40.47.10 1 254 2.9E-79 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_13070 155de7a872cb686c3a75304c9cfaf4b4 408 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 6 405 1.6E-151 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 AMIS_50010 181e1e750613c0466f512fb5dca53ae9 311 SUPERFAMILY SSF54001 192 310 3.19E-35 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily AMIS_50010 181e1e750613c0466f512fb5dca53ae9 311 Pfam PF00877 NlpC/P60 family 211 300 1.2E-21 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain AMIS_50010 181e1e750613c0466f512fb5dca53ae9 311 Gene3D G3DSA:3.90.1720.10 123 307 4.9E-45 T 14-10-2018 AMIS_77760 f11327a13013de1c67ec45d182b78004 142 Pfam PF02261 Aspartate decarboxylase 1 114 7.8E-53 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 AMIS_77760 f11327a13013de1c67ec45d182b78004 142 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 123 2.5E-52 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 AMIS_77760 f11327a13013de1c67ec45d182b78004 142 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 114 8.0E-41 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 AMIS_77760 f11327a13013de1c67ec45d182b78004 142 SUPERFAMILY SSF50692 1 116 5.63E-50 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily AMIS_77760 f11327a13013de1c67ec45d182b78004 142 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 127 76.08 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 AMIS_77760 f11327a13013de1c67ec45d182b78004 142 PIRSF PIRSF006246 1 130 2.9E-54 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 AMIS_77760 f11327a13013de1c67ec45d182b78004 142 Gene3D G3DSA:2.40.40.20 1 124 2.7E-54 T 14-10-2018 AMIS_63660 a0f416f224852a9dc51fc8d12f1a7fa1 150 Gene3D G3DSA:1.10.10.10 9 150 1.2E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_63660 a0f416f224852a9dc51fc8d12f1a7fa1 150 SUPERFAMILY SSF46785 13 149 3.39E-27 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_63660 a0f416f224852a9dc51fc8d12f1a7fa1 150 Pfam PF12802 MarR family 40 100 2.1E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_63660 a0f416f224852a9dc51fc8d12f1a7fa1 150 SMART SM00347 34 137 1.9E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_22980 0d1fe13e684bb9464158f33d1aedc7c4 372 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 115 208 5.6E-23 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMIS_22980 0d1fe13e684bb9464158f33d1aedc7c4 372 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 220 369 9.6E-48 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMIS_22980 0d1fe13e684bb9464158f33d1aedc7c4 372 Gene3D G3DSA:1.20.140.10 225 370 2.4E-50 T 14-10-2018 AMIS_22980 0d1fe13e684bb9464158f33d1aedc7c4 372 Gene3D G3DSA:1.10.540.10 3 113 7.0E-12 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMIS_22980 0d1fe13e684bb9464158f33d1aedc7c4 372 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 111 2.1E-9 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMIS_22980 0d1fe13e684bb9464158f33d1aedc7c4 372 SUPERFAMILY SSF47203 220 369 1.93E-50 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMIS_22980 0d1fe13e684bb9464158f33d1aedc7c4 372 Gene3D G3DSA:2.40.110.10 115 224 6.9E-38 T 14-10-2018 AMIS_22980 0d1fe13e684bb9464158f33d1aedc7c4 372 SUPERFAMILY SSF56645 4 231 7.85E-52 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMIS_5080 1e8ed4c6f78a96c4330b9f3dde083e99 1590 Gene3D G3DSA:3.90.780.10 1086 1288 8.5E-52 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMIS_5080 1e8ed4c6f78a96c4330b9f3dde083e99 1590 SUPERFAMILY SSF55816 1078 1279 1.05E-43 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMIS_5080 1e8ed4c6f78a96c4330b9f3dde083e99 1590 SUPERFAMILY SSF56300 769 1068 1.09E-63 T 14-10-2018 AMIS_5080 1e8ed4c6f78a96c4330b9f3dde083e99 1590 SUPERFAMILY SSF49299 1393 1467 7.98E-8 T 14-10-2018 IPR035986 PKD domain superfamily AMIS_5080 1e8ed4c6f78a96c4330b9f3dde083e99 1590 SUPERFAMILY SSF56219 463 766 6.54E-30 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AMIS_5080 1e8ed4c6f78a96c4330b9f3dde083e99 1590 Gene3D G3DSA:3.60.21.10 771 1073 1.9E-67 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like AMIS_5080 1e8ed4c6f78a96c4330b9f3dde083e99 1590 Pfam PF02872 5'-nucleotidase, C-terminal domain 1084 1245 1.9E-34 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMIS_5080 1e8ed4c6f78a96c4330b9f3dde083e99 1590 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 469 757 2.1E-9 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase AMIS_5080 1e8ed4c6f78a96c4330b9f3dde083e99 1590 Pfam PF00801 PKD domain 1302 1369 8.0E-6 T 14-10-2018 IPR000601 PKD domain AMIS_5080 1e8ed4c6f78a96c4330b9f3dde083e99 1590 Pfam PF00801 PKD domain 1402 1456 2.4E-5 T 14-10-2018 IPR000601 PKD domain AMIS_5080 1e8ed4c6f78a96c4330b9f3dde083e99 1590 Gene3D G3DSA:2.60.40.10 1390 1469 2.7E-9 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_5080 1e8ed4c6f78a96c4330b9f3dde083e99 1590 Gene3D G3DSA:2.60.40.10 1292 1387 2.1E-9 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_5080 1e8ed4c6f78a96c4330b9f3dde083e99 1590 PRINTS PR01607 Apyrase family signature 772 790 2.1E-22 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMIS_5080 1e8ed4c6f78a96c4330b9f3dde083e99 1590 PRINTS PR01607 Apyrase family signature 1143 1166 2.1E-22 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMIS_5080 1e8ed4c6f78a96c4330b9f3dde083e99 1590 PRINTS PR01607 Apyrase family signature 1012 1032 2.1E-22 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMIS_5080 1e8ed4c6f78a96c4330b9f3dde083e99 1590 PRINTS PR01607 Apyrase family signature 980 1003 2.1E-22 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMIS_5080 1e8ed4c6f78a96c4330b9f3dde083e99 1590 PRINTS PR01607 Apyrase family signature 1220 1239 2.1E-22 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMIS_5080 1e8ed4c6f78a96c4330b9f3dde083e99 1590 PRINTS PR01607 Apyrase family signature 947 964 2.1E-22 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMIS_5080 1e8ed4c6f78a96c4330b9f3dde083e99 1590 SUPERFAMILY SSF49299 1284 1374 2.22E-8 T 14-10-2018 IPR035986 PKD domain superfamily AMIS_5080 1e8ed4c6f78a96c4330b9f3dde083e99 1590 Pfam PF00149 Calcineurin-like phosphoesterase 777 998 2.1E-11 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AMIS_5080 1e8ed4c6f78a96c4330b9f3dde083e99 1590 Gene3D G3DSA:3.60.10.10 466 764 1.9E-37 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AMIS_5080 1e8ed4c6f78a96c4330b9f3dde083e99 1590 SMART SM00089 1392 1465 0.31 T 14-10-2018 IPR022409 PKD/Chitinase domain AMIS_5080 1e8ed4c6f78a96c4330b9f3dde083e99 1590 SMART SM00089 1297 1385 3.9E-4 T 14-10-2018 IPR022409 PKD/Chitinase domain AMIS_61160 db734fdce79855edd965145b72379e92 338 Pfam PF00294 pfkB family carbohydrate kinase 36 314 5.8E-38 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB AMIS_61160 db734fdce79855edd965145b72379e92 338 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 27 321 3.2E-88 T 14-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 AMIS_61160 db734fdce79855edd965145b72379e92 338 SUPERFAMILY SSF53613 28 316 5.61E-58 T 14-10-2018 IPR029056 Ribokinase-like AMIS_61160 db734fdce79855edd965145b72379e92 338 Gene3D G3DSA:3.40.1190.20 25 329 4.1E-87 T 14-10-2018 IPR029056 Ribokinase-like AMIS_61160 db734fdce79855edd965145b72379e92 338 PIRSF PIRSF000535 25 328 7.7E-69 T 14-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 AMIS_61160 db734fdce79855edd965145b72379e92 338 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 271 284 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AMIS_2200 67dabad67f03f162f53c0fb80753f1fa 1027 SMART SM00487 555 740 1.9E-30 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMIS_2200 67dabad67f03f162f53c0fb80753f1fa 1027 Gene3D G3DSA:3.40.50.10810 536 771 1.4E-66 T 14-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily AMIS_2200 67dabad67f03f162f53c0fb80753f1fa 1027 Gene3D G3DSA:3.40.50.300 777 979 2.9E-92 T 14-10-2018 AMIS_2200 67dabad67f03f162f53c0fb80753f1fa 1027 SUPERFAMILY SSF52540 547 768 1.58E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_2200 67dabad67f03f162f53c0fb80753f1fa 1027 Pfam PF12419 SNF2 Helicase protein 377 515 2.8E-37 T 14-10-2018 IPR022138 Helicase SWF/SNF-related AMIS_2200 67dabad67f03f162f53c0fb80753f1fa 1027 Pfam PF00271 Helicase conserved C-terminal domain 854 965 4.9E-16 T 14-10-2018 IPR001650 Helicase, C-terminal AMIS_2200 67dabad67f03f162f53c0fb80753f1fa 1027 SUPERFAMILY SSF52540 771 1022 3.19E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_2200 67dabad67f03f162f53c0fb80753f1fa 1027 Gene3D G3DSA:1.20.120.850 792 1015 2.9E-92 T 14-10-2018 AMIS_2200 67dabad67f03f162f53c0fb80753f1fa 1027 Pfam PF00176 SNF2 family N-terminal domain 572 837 3.5E-57 T 14-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 AMIS_2200 67dabad67f03f162f53c0fb80753f1fa 1027 SMART SM00490 881 965 7.5E-21 T 14-10-2018 IPR001650 Helicase, C-terminal AMIS_49990 00d64dd8926240a9739b51ae4dc3d980 346 SMART SM00028 114 147 1.2 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_49990 00d64dd8926240a9739b51ae4dc3d980 346 SMART SM00028 34 67 29.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_49990 00d64dd8926240a9739b51ae4dc3d980 346 SMART SM00028 148 181 300.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_49990 00d64dd8926240a9739b51ae4dc3d980 346 Gene3D G3DSA:1.25.40.10 2 228 5.5E-24 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_49990 00d64dd8926240a9739b51ae4dc3d980 346 SUPERFAMILY SSF48452 6 183 9.59E-20 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_49990 00d64dd8926240a9739b51ae4dc3d980 346 Pfam PF13428 Tetratricopeptide repeat 115 156 3.9E-5 T 14-10-2018 AMIS_27660 a464f585ee8275765a1a2770909c3351 255 SUPERFAMILY SSF48452 23 214 1.21E-25 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_27660 a464f585ee8275765a1a2770909c3351 255 SMART SM00028 191 224 15.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_27660 a464f585ee8275765a1a2770909c3351 255 SMART SM00028 47 80 0.079 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_27660 a464f585ee8275765a1a2770909c3351 255 SMART SM00028 81 114 0.0086 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_27660 a464f585ee8275765a1a2770909c3351 255 SMART SM00028 115 148 11.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_27660 a464f585ee8275765a1a2770909c3351 255 SMART SM00028 13 46 350.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_27660 a464f585ee8275765a1a2770909c3351 255 Pfam PF13432 Tetratricopeptide repeat 161 211 0.0039 T 14-10-2018 AMIS_27660 a464f585ee8275765a1a2770909c3351 255 Pfam PF13432 Tetratricopeptide repeat 51 113 2.1E-9 T 14-10-2018 AMIS_27660 a464f585ee8275765a1a2770909c3351 255 Gene3D G3DSA:1.25.40.10 7 236 6.6E-38 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_27660 a464f585ee8275765a1a2770909c3351 255 Pfam PF13374 Tetratricopeptide repeat 117 144 0.0028 T 14-10-2018 AMIS_41220 d00cb60f28ef957a7c3e770bd2390d58 282 SUPERFAMILY SSF51735 1 276 1.57E-57 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_41220 d00cb60f28ef957a7c3e770bd2390d58 282 Gene3D G3DSA:3.40.50.720 1 274 2.0E-59 T 14-10-2018 AMIS_41220 d00cb60f28ef957a7c3e770bd2390d58 282 Pfam PF04321 RmlD substrate binding domain 1 269 3.7E-44 T 14-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 AMIS_14360 e57b9d17ee9df1cfe416be7628eed618 401 PRINTS PR01988 Putative bacilysin exporter bacE signature 246 263 2.3E-8 T 14-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 AMIS_14360 e57b9d17ee9df1cfe416be7628eed618 401 PRINTS PR01988 Putative bacilysin exporter bacE signature 7 29 2.3E-8 T 14-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 AMIS_14360 e57b9d17ee9df1cfe416be7628eed618 401 PRINTS PR01988 Putative bacilysin exporter bacE signature 162 179 2.3E-8 T 14-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 AMIS_14360 e57b9d17ee9df1cfe416be7628eed618 401 PRINTS PR01988 Putative bacilysin exporter bacE signature 70 88 2.3E-8 T 14-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 AMIS_14360 e57b9d17ee9df1cfe416be7628eed618 401 SUPERFAMILY SSF103473 3 382 5.89E-39 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_14360 e57b9d17ee9df1cfe416be7628eed618 401 Pfam PF05977 Transmembrane secretion effector 5 381 7.3E-25 T 14-10-2018 IPR010290 Transmembrane secretion effector AMIS_14360 e57b9d17ee9df1cfe416be7628eed618 401 Gene3D G3DSA:1.20.1250.20 1 378 3.0E-37 T 14-10-2018 AMIS_3050 bf10349e97a3f30b952e2a1803d5fdc9 97 Gene3D G3DSA:1.10.287.1060 2 97 1.2E-22 T 14-10-2018 AMIS_3050 bf10349e97a3f30b952e2a1803d5fdc9 97 Pfam PF06013 Proteins of 100 residues with WXG 6 90 2.4E-15 T 14-10-2018 IPR010310 Type VII secretion system ESAT-6-like AMIS_3050 bf10349e97a3f30b952e2a1803d5fdc9 97 TIGRFAM TIGR03930 WXG100_ESAT6: WXG100 family type VII secretion target 6 93 6.6E-19 T 14-10-2018 IPR010310 Type VII secretion system ESAT-6-like AMIS_3050 bf10349e97a3f30b952e2a1803d5fdc9 97 SUPERFAMILY SSF140453 5 96 6.8E-19 T 14-10-2018 IPR036689 ESAT-6-like superfamily AMIS_65100 4acd84dd2b469ec0f3d955451ad31e1d 161 SUPERFAMILY SSF50475 8 160 4.37E-46 T 14-10-2018 AMIS_65100 4acd84dd2b469ec0f3d955451ad31e1d 161 Gene3D G3DSA:2.30.110.10 5 161 5.8E-49 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AMIS_65100 4acd84dd2b469ec0f3d955451ad31e1d 161 Pfam PF01613 Flavin reductase like domain 17 160 1.4E-34 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 AMIS_65100 4acd84dd2b469ec0f3d955451ad31e1d 161 SMART SM00903 16 159 4.7E-54 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 AMIS_24820 3e6af845b032ca35f73b6a255eb52541 629 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 52 162 8.4E-22 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMIS_24820 3e6af845b032ca35f73b6a255eb52541 629 Gene3D G3DSA:2.40.110.10 164 267 1.4E-128 T 14-10-2018 AMIS_24820 3e6af845b032ca35f73b6a255eb52541 629 SUPERFAMILY SSF56645 48 278 3.66E-59 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMIS_24820 3e6af845b032ca35f73b6a255eb52541 629 Gene3D G3DSA:1.10.540.10 54 163 1.4E-128 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMIS_24820 3e6af845b032ca35f73b6a255eb52541 629 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 165 256 4.1E-20 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMIS_24820 3e6af845b032ca35f73b6a255eb52541 629 Gene3D G3DSA:1.20.140.10 268 424 1.4E-128 T 14-10-2018 AMIS_24820 3e6af845b032ca35f73b6a255eb52541 629 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 268 426 4.7E-32 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMIS_24820 3e6af845b032ca35f73b6a255eb52541 629 SUPERFAMILY SSF47203 268 427 6.77E-38 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMIS_24820 3e6af845b032ca35f73b6a255eb52541 629 Pfam PF09317 Domain of unknown function (DUF1974) 481 581 9.6E-8 T 14-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 AMIS_24820 3e6af845b032ca35f73b6a255eb52541 629 Gene3D G3DSA:1.20.140.10 481 586 1.9E-13 T 14-10-2018 AMIS_11990 e81a9df7721b16291fdba986902de4b2 272 Gene3D G3DSA:3.40.50.1820 1 268 3.3E-63 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_11990 e81a9df7721b16291fdba986902de4b2 272 PRINTS PR00412 Epoxide hydrolase signature 107 120 1.1E-13 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_11990 e81a9df7721b16291fdba986902de4b2 272 PRINTS PR00412 Epoxide hydrolase signature 27 45 1.1E-13 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_11990 e81a9df7721b16291fdba986902de4b2 272 PRINTS PR00412 Epoxide hydrolase signature 213 229 1.1E-13 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_11990 e81a9df7721b16291fdba986902de4b2 272 PRINTS PR00412 Epoxide hydrolase signature 93 106 1.1E-13 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_11990 e81a9df7721b16291fdba986902de4b2 272 PRINTS PR00412 Epoxide hydrolase signature 247 269 1.1E-13 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_11990 e81a9df7721b16291fdba986902de4b2 272 Pfam PF00561 alpha/beta hydrolase fold 22 258 1.8E-25 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_11990 e81a9df7721b16291fdba986902de4b2 272 SUPERFAMILY SSF53474 3 268 4.09E-56 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_54630 377df9b6a5d2d567d2cee910d8ac30c6 584 Gene3D G3DSA:2.60.120.560 430 579 2.3E-6 T 14-10-2018 AMIS_54630 377df9b6a5d2d567d2cee910d8ac30c6 584 Gene3D G3DSA:3.30.200.20 17 103 2.5E-18 T 14-10-2018 AMIS_54630 377df9b6a5d2d567d2cee910d8ac30c6 584 Gene3D G3DSA:1.10.510.10 104 293 5.3E-43 T 14-10-2018 AMIS_54630 377df9b6a5d2d567d2cee910d8ac30c6 584 SMART SM00220 25 279 7.7E-47 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMIS_54630 377df9b6a5d2d567d2cee910d8ac30c6 584 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 31 53 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 AMIS_54630 377df9b6a5d2d567d2cee910d8ac30c6 584 SUPERFAMILY SSF56112 22 280 3.1E-65 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMIS_54630 377df9b6a5d2d567d2cee910d8ac30c6 584 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 143 155 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 AMIS_54630 377df9b6a5d2d567d2cee910d8ac30c6 584 Pfam PF00069 Protein kinase domain 25 274 1.3E-44 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMIS_51430 144d6f69618bc49d51309ac24de18fcd 134 TIGRFAM TIGR02753 sodN: superoxide dismutase, Ni 9 133 2.4E-44 T 14-10-2018 IPR014123 Superoxide dismutase, Nickel-type GO:0004784|GO:0016151|GO:0016209 MetaCyc: PWY-6854 AMIS_51430 144d6f69618bc49d51309ac24de18fcd 134 Pfam PF09055 Nickel-containing superoxide dismutase 12 132 4.3E-43 T 14-10-2018 IPR014123 Superoxide dismutase, Nickel-type GO:0004784|GO:0016151|GO:0016209 MetaCyc: PWY-6854 AMIS_51430 144d6f69618bc49d51309ac24de18fcd 134 SUPERFAMILY SSF109770 17 133 2.75E-49 T 14-10-2018 IPR036502 Nickel-containing superoxide dismutase superfamily MetaCyc: PWY-6854 AMIS_51430 144d6f69618bc49d51309ac24de18fcd 134 Gene3D G3DSA:1.20.120.400 16 134 1.2E-44 T 14-10-2018 IPR036502 Nickel-containing superoxide dismutase superfamily MetaCyc: PWY-6854 AMIS_40190 867022743e7dd58e7b65c468f0273ebd 909 Gene3D G3DSA:3.20.20.80 38 473 7.4E-104 T 14-10-2018 AMIS_40190 867022743e7dd58e7b65c468f0273ebd 909 Pfam PF03714 Bacterial pullanase-associated domain 800 903 1.1E-14 T 14-10-2018 IPR005323 Pullulanase, carbohydrate-binding module 41 GO:0005975|GO:0030246 AMIS_40190 867022743e7dd58e7b65c468f0273ebd 909 Gene3D G3DSA:2.60.40.1180 508 596 6.7E-14 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta AMIS_40190 867022743e7dd58e7b65c468f0273ebd 909 SUPERFAMILY SSF49452 799 906 3.6E-22 T 14-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 AMIS_40190 867022743e7dd58e7b65c468f0273ebd 909 Pfam PF00128 Alpha amylase, catalytic domain 89 453 4.5E-76 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMIS_40190 867022743e7dd58e7b65c468f0273ebd 909 SUPERFAMILY SSF51445 40 514 1.83E-82 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_40190 867022743e7dd58e7b65c468f0273ebd 909 Gene3D G3DSA:2.60.40.1110 795 907 1.0E-19 T 14-10-2018 AMIS_40190 867022743e7dd58e7b65c468f0273ebd 909 Gene3D G3DSA:2.60.40.10 607 700 4.5E-5 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_40190 867022743e7dd58e7b65c468f0273ebd 909 SUPERFAMILY SSF51011 514 595 1.74E-8 T 14-10-2018 AMIS_40190 867022743e7dd58e7b65c468f0273ebd 909 SMART SM00642 51 505 3.7E-80 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMIS_80880 31df553a5fd5f2bbe00b7889fd382558 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 147 1.5E-40 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_80880 31df553a5fd5f2bbe00b7889fd382558 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 24.947 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_80880 31df553a5fd5f2bbe00b7889fd382558 149 SUPERFAMILY SSF55658 1 57 8.89E-18 T 14-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal AMIS_80880 31df553a5fd5f2bbe00b7889fd382558 149 SUPERFAMILY SSF55653 57 147 5.76E-25 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily AMIS_80880 31df553a5fd5f2bbe00b7889fd382558 149 Gene3D G3DSA:3.40.5.10 1 60 1.5E-20 T 14-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_80880 31df553a5fd5f2bbe00b7889fd382558 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 46 1.6E-21 T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_80880 31df553a5fd5f2bbe00b7889fd382558 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_80880 31df553a5fd5f2bbe00b7889fd382558 149 Gene3D G3DSA:3.10.430.100 61 149 2.1E-26 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily AMIS_80880 31df553a5fd5f2bbe00b7889fd382558 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 147 4.7E-27 T 14-10-2018 IPR020069 Ribosomal protein L9, C-terminal AMIS_58280 d2b3094f18f0a7789f56e1e0cfd7aec3 416 Pfam PF13439 Glycosyltransferase Family 4 13 190 5.9E-21 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AMIS_58280 d2b3094f18f0a7789f56e1e0cfd7aec3 416 Gene3D G3DSA:3.40.50.2000 196 387 1.2E-29 T 14-10-2018 AMIS_58280 d2b3094f18f0a7789f56e1e0cfd7aec3 416 Pfam PF13692 Glycosyl transferases group 1 215 320 7.9E-19 T 14-10-2018 AMIS_58280 d2b3094f18f0a7789f56e1e0cfd7aec3 416 Gene3D G3DSA:3.40.50.2000 1 195 1.2E-18 T 14-10-2018 AMIS_58280 d2b3094f18f0a7789f56e1e0cfd7aec3 416 SUPERFAMILY SSF53756 1 383 2.51E-61 T 14-10-2018 AMIS_4110 33e0d311b773f5ffe244c52bc59a1055 173 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 37 69 - T 14-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_4110 33e0d311b773f5ffe244c52bc59a1055 173 SUPERFAMILY SSF88946 3 97 1.08E-24 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_4110 33e0d311b773f5ffe244c52bc59a1055 173 Pfam PF04542 Sigma-70 region 2 15 84 2.0E-21 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_4110 33e0d311b773f5ffe244c52bc59a1055 173 Gene3D G3DSA:1.10.1740.10 1 104 1.9E-18 T 14-10-2018 AMIS_4110 33e0d311b773f5ffe244c52bc59a1055 173 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 13 164 1.1E-25 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_4110 33e0d311b773f5ffe244c52bc59a1055 173 Pfam PF04545 Sigma-70, region 4 115 163 3.5E-11 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 AMIS_4110 33e0d311b773f5ffe244c52bc59a1055 173 Gene3D G3DSA:1.10.10.10 105 173 8.7E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_4110 33e0d311b773f5ffe244c52bc59a1055 173 SUPERFAMILY SSF88659 104 167 4.67E-13 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_7410 5a4121ef68c24b12f240c4b0c9f2e329 304 SMART SM00382 28 220 2.4E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_7410 5a4121ef68c24b12f240c4b0c9f2e329 304 SUPERFAMILY SSF52540 9 213 5.33E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_7410 5a4121ef68c24b12f240c4b0c9f2e329 304 Gene3D G3DSA:3.40.50.300 2 235 3.7E-56 T 14-10-2018 AMIS_7410 5a4121ef68c24b12f240c4b0c9f2e329 304 Pfam PF00005 ABC transporter 22 163 4.6E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_37610 1e5a9e41f70be81c69566822bb9f8f6b 385 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 59 379 1.2E-117 T 14-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 AMIS_37610 1e5a9e41f70be81c69566822bb9f8f6b 385 Gene3D G3DSA:3.40.50.300 24 246 2.8E-63 T 14-10-2018 AMIS_37610 1e5a9e41f70be81c69566822bb9f8f6b 385 SMART SM00382 53 236 5.8E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_37610 1e5a9e41f70be81c69566822bb9f8f6b 385 SUPERFAMILY SSF52540 25 266 6.44E-86 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_37610 1e5a9e41f70be81c69566822bb9f8f6b 385 Gene3D G3DSA:2.40.50.940 247 378 2.9E-11 T 14-10-2018 AMIS_37610 1e5a9e41f70be81c69566822bb9f8f6b 385 Pfam PF08402 TOBE domain 303 379 3.1E-16 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 AMIS_37610 1e5a9e41f70be81c69566822bb9f8f6b 385 Gene3D G3DSA:2.40.50.140 310 375 2.9E-11 T 14-10-2018 AMIS_37610 1e5a9e41f70be81c69566822bb9f8f6b 385 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_37610 1e5a9e41f70be81c69566822bb9f8f6b 385 SUPERFAMILY SSF50331 262 379 6.23E-16 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal AMIS_37610 1e5a9e41f70be81c69566822bb9f8f6b 385 Pfam PF00005 ABC transporter 45 186 6.1E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_23160 ef2957c1a28e17ffb48983145fe40251 895 Pfam PF00196 Bacterial regulatory proteins, luxR family 841 893 6.9E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_23160 ef2957c1a28e17ffb48983145fe40251 895 Gene3D G3DSA:3.40.50.300 1 166 1.7E-5 T 14-10-2018 AMIS_23160 ef2957c1a28e17ffb48983145fe40251 895 Gene3D G3DSA:1.10.10.10 817 895 1.8E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_23160 ef2957c1a28e17ffb48983145fe40251 895 SUPERFAMILY SSF46894 829 893 3.23E-16 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_23160 ef2957c1a28e17ffb48983145fe40251 895 SMART SM00421 839 894 2.7E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_23160 ef2957c1a28e17ffb48983145fe40251 895 Gene3D G3DSA:1.25.40.10 568 815 4.0E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_23160 ef2957c1a28e17ffb48983145fe40251 895 SUPERFAMILY SSF52540 5 219 9.77E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_23160 ef2957c1a28e17ffb48983145fe40251 895 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 872 884 9.9E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_23160 ef2957c1a28e17ffb48983145fe40251 895 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 842 856 9.9E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_23160 ef2957c1a28e17ffb48983145fe40251 895 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 856 872 9.9E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_23160 ef2957c1a28e17ffb48983145fe40251 895 Pfam PF13191 AAA ATPase domain 7 164 7.2E-20 T 14-10-2018 AMIS_56550 24b0e1786c3c603ca5cdeb5c4a09cbba 494 ProSitePatterns PS00571 Amidases signature. 152 183 - T 14-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 AMIS_56550 24b0e1786c3c603ca5cdeb5c4a09cbba 494 SUPERFAMILY SSF75304 2 490 1.31E-103 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMIS_56550 24b0e1786c3c603ca5cdeb5c4a09cbba 494 Gene3D G3DSA:3.90.1300.10 3 493 9.1E-103 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMIS_56550 24b0e1786c3c603ca5cdeb5c4a09cbba 494 Pfam PF01425 Amidase 25 471 6.1E-82 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMIS_70050 9f07a5612255130c9935367f25d2ef19 185 Pfam PF01765 Ribosome recycling factor 21 183 1.4E-59 T 14-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 AMIS_70050 9f07a5612255130c9935367f25d2ef19 185 Gene3D G3DSA:3.30.1360.40 31 105 4.5E-64 T 14-10-2018 AMIS_70050 9f07a5612255130c9935367f25d2ef19 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 26.273 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 AMIS_70050 9f07a5612255130c9935367f25d2ef19 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 4.1E-62 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 AMIS_70050 9f07a5612255130c9935367f25d2ef19 185 Gene3D G3DSA:1.10.132.20 12 182 4.5E-64 T 14-10-2018 AMIS_70050 9f07a5612255130c9935367f25d2ef19 185 SUPERFAMILY SSF55194 2 185 3.4E-67 T 14-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 AMIS_8020 3ee01d29114d10bf889c8b4cfe8e069c 164 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 84 158 1.0E-18 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AMIS_8020 3ee01d29114d10bf889c8b4cfe8e069c 164 SUPERFAMILY SSF54534 85 158 5.76E-13 T 14-10-2018 AMIS_8020 3ee01d29114d10bf889c8b4cfe8e069c 164 Gene3D G3DSA:1.10.287.180 7 78 1.9E-19 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 AMIS_8020 3ee01d29114d10bf889c8b4cfe8e069c 164 PIRSF PIRSF006092 4 161 5.2E-30 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 AMIS_8020 3ee01d29114d10bf889c8b4cfe8e069c 164 Pfam PF03449 Transcription elongation factor, N-terminal 10 78 7.4E-22 T 14-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AMIS_8020 3ee01d29114d10bf889c8b4cfe8e069c 164 SUPERFAMILY SSF46557 8 80 3.01E-21 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 AMIS_8020 3ee01d29114d10bf889c8b4cfe8e069c 164 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 22 52 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AMIS_8020 3ee01d29114d10bf889c8b4cfe8e069c 164 Hamap MF_00105 Transcription elongation factor GreA [greA]. 7 160 26.529 T 14-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 AMIS_8020 3ee01d29114d10bf889c8b4cfe8e069c 164 Gene3D G3DSA:3.10.50.30 80 162 6.6E-12 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 AMIS_10760 8249be36a9d7b79c8b0af87bdd6915c1 372 Pfam PF01435 Peptidase family M48 76 268 9.3E-22 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AMIS_10760 8249be36a9d7b79c8b0af87bdd6915c1 372 Gene3D G3DSA:3.30.2010.10 68 155 6.3E-13 T 14-10-2018 AMIS_1270 237c61c67cc33b40d4fe155e213dec18 354 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 173 193 1.0E-20 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AMIS_1270 237c61c67cc33b40d4fe155e213dec18 354 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 63 77 1.0E-20 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AMIS_1270 237c61c67cc33b40d4fe155e213dec18 354 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 285 296 1.0E-20 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AMIS_1270 237c61c67cc33b40d4fe155e213dec18 354 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 129 151 1.0E-20 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AMIS_1270 237c61c67cc33b40d4fe155e213dec18 354 PIRSF PIRSF000188 1 352 1.3E-137 T 14-10-2018 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal GO:0016639|GO:0055114 AMIS_1270 237c61c67cc33b40d4fe155e213dec18 354 Gene3D G3DSA:3.40.50.720 131 335 1.8E-127 T 14-10-2018 AMIS_1270 237c61c67cc33b40d4fe155e213dec18 354 SUPERFAMILY SSF53223 3 141 2.21E-45 T 14-10-2018 AMIS_1270 237c61c67cc33b40d4fe155e213dec18 354 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 71 84 - T 14-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AMIS_1270 237c61c67cc33b40d4fe155e213dec18 354 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 17 128 9.1E-25 T 14-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AMIS_1270 237c61c67cc33b40d4fe155e213dec18 354 SMART SM00839 141 350 2.0E-38 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AMIS_1270 237c61c67cc33b40d4fe155e213dec18 354 SUPERFAMILY SSF51735 138 350 7.19E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_1270 237c61c67cc33b40d4fe155e213dec18 354 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 213 292 2.3E-9 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AMIS_1270 237c61c67cc33b40d4fe155e213dec18 354 Gene3D G3DSA:3.40.50.10860 7 342 1.8E-127 T 14-10-2018 AMIS_23580 f0fd323af9df5384d61c9d0e48d1a8a8 272 SUPERFAMILY SSF110710 3 271 2.62E-67 T 14-10-2018 IPR028345 Aminoglycoside 3-N-acetyltransferase-like AMIS_23580 f0fd323af9df5384d61c9d0e48d1a8a8 272 Pfam PF02522 Aminoglycoside 3-N-acetyltransferase 31 267 9.3E-68 T 14-10-2018 IPR003679 Aminoglycoside N(3)-acetyltransferase GO:0046353|GO:0046677 AMIS_48150 82aaef9a44e0cf3bbabf10ffaa08b196 104 SUPERFAMILY SSF50118 2 104 5.01E-8 T 14-10-2018 AMIS_48150 82aaef9a44e0cf3bbabf10ffaa08b196 104 Gene3D G3DSA:2.30.30.110 2 102 1.0E-5 T 14-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor AMIS_43510 e01dc8d2ffca52334ba503ff43b95cfd 666 Pfam PF00171 Aldehyde dehydrogenase family 20 431 6.2E-62 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AMIS_43510 e01dc8d2ffca52334ba503ff43b95cfd 666 Pfam PF01575 MaoC like domain 535 632 5.4E-20 T 14-10-2018 IPR002539 MaoC-like dehydratase domain AMIS_43510 e01dc8d2ffca52334ba503ff43b95cfd 666 SUPERFAMILY SSF53720 3 492 8.77E-79 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMIS_43510 e01dc8d2ffca52334ba503ff43b95cfd 666 SUPERFAMILY SSF54637 517 662 3.74E-38 T 14-10-2018 IPR029069 HotDog domain superfamily AMIS_43510 e01dc8d2ffca52334ba503ff43b95cfd 666 Gene3D G3DSA:3.10.129.10 520 666 1.4E-42 T 14-10-2018 AMIS_43510 e01dc8d2ffca52334ba503ff43b95cfd 666 Gene3D G3DSA:3.40.309.10 257 463 1.9E-145 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AMIS_43510 e01dc8d2ffca52334ba503ff43b95cfd 666 Gene3D G3DSA:3.40.605.10 8 475 1.9E-145 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AMIS_43510 e01dc8d2ffca52334ba503ff43b95cfd 666 TIGRFAM TIGR02278 PaaN-DH: phenylacetic acid degradation protein paaN 2 662 8.0E-302 T 14-10-2018 IPR011966 Phenylacetic acid degradation protein PaaN KEGG: 00360+3.3.2.12+1.2.1.91 AMIS_9470 ece7df4de2de27b83ef7247382d3e519 241 Gene3D G3DSA:3.30.230.70 14 241 7.5E-54 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AMIS_9470 ece7df4de2de27b83ef7247382d3e519 241 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 3 240 5.1E-109 T 14-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 AMIS_9470 ece7df4de2de27b83ef7247382d3e519 241 Hamap MF_00564 Ribonuclease PH [rph]. 12 241 41.73 T 14-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 AMIS_9470 ece7df4de2de27b83ef7247382d3e519 241 Pfam PF03725 3' exoribonuclease family, domain 2 165 225 9.1E-9 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AMIS_9470 ece7df4de2de27b83ef7247382d3e519 241 ProSitePatterns PS01277 Ribonuclease PH signature. 117 130 - T 14-10-2018 IPR018336 Ribonuclease PH, conserved site AMIS_9470 ece7df4de2de27b83ef7247382d3e519 241 SUPERFAMILY SSF55666 162 240 5.11E-19 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AMIS_9470 ece7df4de2de27b83ef7247382d3e519 241 SUPERFAMILY SSF54211 3 184 4.5E-45 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMIS_9470 ece7df4de2de27b83ef7247382d3e519 241 Pfam PF01138 3' exoribonuclease family, domain 1 11 141 1.9E-20 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AMIS_36130 062f7e74d637cade197590ac5911f551 234 SMART SM00382 35 222 2.7E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_36130 062f7e74d637cade197590ac5911f551 234 SUPERFAMILY SSF52540 6 229 1.44E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_36130 062f7e74d637cade197590ac5911f551 234 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_36130 062f7e74d637cade197590ac5911f551 234 Pfam PF00005 ABC transporter 26 174 1.7E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_36130 062f7e74d637cade197590ac5911f551 234 Gene3D G3DSA:3.40.50.300 4 233 6.1E-67 T 14-10-2018 AMIS_63160 291a6e7355dbf5e60faeee7757538762 316 TIGRFAM TIGR03557 F420_G6P_family: F420-dependent oxidoreductase, G6PDH family 3 315 1.0E-139 T 14-10-2018 IPR019945 F420-dependent glucose-6-phosphate dehydrogenase-related AMIS_63160 291a6e7355dbf5e60faeee7757538762 316 SUPERFAMILY SSF51679 1 315 6.54E-66 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_63160 291a6e7355dbf5e60faeee7757538762 316 Pfam PF00296 Luciferase-like monooxygenase 1 290 5.1E-52 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMIS_63160 291a6e7355dbf5e60faeee7757538762 316 Gene3D G3DSA:3.20.20.30 1 316 8.9E-71 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_43820 228f02659e15b9eb185200c0a53363f8 437 SUPERFAMILY SSF102114 156 411 4.12E-7 T 14-10-2018 AMIS_43820 228f02659e15b9eb185200c0a53363f8 437 Gene3D G3DSA:3.20.20.70 151 321 2.8E-5 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_65620 1872723e88f30db9c2d439ac820c0ff3 194 SUPERFAMILY SSF52499 3 193 7.2E-41 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AMIS_65620 1872723e88f30db9c2d439ac820c0ff3 194 Pfam PF00857 Isochorismatase family 4 145 1.4E-32 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 AMIS_65620 1872723e88f30db9c2d439ac820c0ff3 194 Gene3D G3DSA:3.40.50.850 1 194 1.9E-44 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AMIS_66360 07771e8717857bb69fb8c89cf4af5246 468 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 35 96 2.6E-16 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMIS_66360 07771e8717857bb69fb8c89cf4af5246 468 SUPERFAMILY SSF56014 374 437 1.03E-5 T 14-10-2018 AMIS_66360 07771e8717857bb69fb8c89cf4af5246 468 Gene3D G3DSA:3.30.413.10 103 292 4.5E-30 T 14-10-2018 AMIS_66360 07771e8717857bb69fb8c89cf4af5246 468 SUPERFAMILY SSF55124 20 100 1.96E-20 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMIS_66360 07771e8717857bb69fb8c89cf4af5246 468 Gene3D G3DSA:3.90.480.10 39 353 4.5E-30 T 14-10-2018 AMIS_66360 07771e8717857bb69fb8c89cf4af5246 468 SUPERFAMILY SSF55124 278 366 2.06E-7 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMIS_55500 51e57a69d1dd3856ec200c8ab61bab0f 343 Gene3D G3DSA:3.40.50.2300 174 303 4.4E-73 T 14-10-2018 AMIS_55500 51e57a69d1dd3856ec200c8ab61bab0f 343 Gene3D G3DSA:3.40.50.2300 64 319 4.4E-73 T 14-10-2018 AMIS_55500 51e57a69d1dd3856ec200c8ab61bab0f 343 SUPERFAMILY SSF47413 9 68 3.56E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_55500 51e57a69d1dd3856ec200c8ab61bab0f 343 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 22 32 1.0E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_55500 51e57a69d1dd3856ec200c8ab61bab0f 343 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 12 22 1.0E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_55500 51e57a69d1dd3856ec200c8ab61bab0f 343 ProSitePatterns PS00356 LacI-type HTH domain signature. 13 31 - T 14-10-2018 AMIS_55500 51e57a69d1dd3856ec200c8ab61bab0f 343 Pfam PF13377 Periplasmic binding protein-like domain 182 341 1.2E-34 T 14-10-2018 AMIS_55500 51e57a69d1dd3856ec200c8ab61bab0f 343 Pfam PF00356 Bacterial regulatory proteins, lacI family 12 57 1.7E-15 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_55500 51e57a69d1dd3856ec200c8ab61bab0f 343 Gene3D G3DSA:1.10.260.40 4 63 9.5E-22 T 14-10-2018 AMIS_55500 51e57a69d1dd3856ec200c8ab61bab0f 343 SUPERFAMILY SSF53822 84 341 2.19E-65 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_55500 51e57a69d1dd3856ec200c8ab61bab0f 343 SMART SM00354 10 80 3.5E-24 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_69640 c366d2b38ee526d66135d54e3bc1c190 1035 SUPERFAMILY SSF52156 817 942 1.31E-32 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily AMIS_69640 c366d2b38ee526d66135d54e3bc1c190 1035 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 527 687 1.7E-30 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AMIS_69640 c366d2b38ee526d66135d54e3bc1c190 1035 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 8 1034 16.662 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 AMIS_69640 c366d2b38ee526d66135d54e3bc1c190 1035 Gene3D G3DSA:2.40.30.10 937 1035 5.4E-28 T 14-10-2018 AMIS_69640 c366d2b38ee526d66135d54e3bc1c190 1035 SUPERFAMILY SSF50447 936 1034 1.19E-26 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AMIS_69640 c366d2b38ee526d66135d54e3bc1c190 1035 Pfam PF00009 Elongation factor Tu GTP binding domain 530 690 1.9E-33 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_69640 c366d2b38ee526d66135d54e3bc1c190 1035 Gene3D G3DSA:2.40.30.10 701 821 4.0E-38 T 14-10-2018 AMIS_69640 c366d2b38ee526d66135d54e3bc1c190 1035 SUPERFAMILY SSF52540 519 692 3.25E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_69640 c366d2b38ee526d66135d54e3bc1c190 1035 Gene3D G3DSA:1.10.10.2480 7 67 1.5E-13 T 14-10-2018 AMIS_69640 c366d2b38ee526d66135d54e3bc1c190 1035 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 438 1034 4.7E-223 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 AMIS_69640 c366d2b38ee526d66135d54e3bc1c190 1035 SUPERFAMILY SSF50447 703 784 1.39E-23 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AMIS_69640 c366d2b38ee526d66135d54e3bc1c190 1035 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 7 55 8.1E-14 T 14-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal AMIS_69640 c366d2b38ee526d66135d54e3bc1c190 1035 Gene3D G3DSA:3.40.50.10050 825 936 1.4E-33 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily AMIS_69640 c366d2b38ee526d66135d54e3bc1c190 1035 Pfam PF11987 Translation-initiation factor 2 817 925 6.7E-34 T 14-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 AMIS_69640 c366d2b38ee526d66135d54e3bc1c190 1035 Gene3D G3DSA:3.40.50.300 522 700 2.4E-67 T 14-10-2018 AMIS_69640 c366d2b38ee526d66135d54e3bc1c190 1035 PRINTS PR00315 GTP-binding elongation factor signature 581 591 8.8E-9 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_69640 c366d2b38ee526d66135d54e3bc1c190 1035 PRINTS PR00315 GTP-binding elongation factor signature 597 608 8.8E-9 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_69640 c366d2b38ee526d66135d54e3bc1c190 1035 PRINTS PR00315 GTP-binding elongation factor signature 529 542 8.8E-9 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_69640 c366d2b38ee526d66135d54e3bc1c190 1035 PRINTS PR00315 GTP-binding elongation factor signature 633 642 8.8E-9 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_5300 3ca7d2e7442d8fa0511bb62822665410 710 Gene3D G3DSA:3.40.50.300 5 216 1.8E-52 T 14-10-2018 AMIS_5300 3ca7d2e7442d8fa0511bb62822665410 710 SUPERFAMILY SSF52540 75 364 1.83E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_5300 3ca7d2e7442d8fa0511bb62822665410 710 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 26 363 2.4E-66 T 14-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 AMIS_5300 3ca7d2e7442d8fa0511bb62822665410 710 Pfam PF16124 RecQ zinc-binding 444 486 1.1E-5 T 14-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain AMIS_5300 3ca7d2e7442d8fa0511bb62822665410 710 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 152 161 - T 14-10-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site AMIS_5300 3ca7d2e7442d8fa0511bb62822665410 710 SMART SM00490 264 345 1.3E-21 T 14-10-2018 IPR001650 Helicase, C-terminal AMIS_5300 3ca7d2e7442d8fa0511bb62822665410 710 SMART SM00487 25 225 1.1E-19 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMIS_5300 3ca7d2e7442d8fa0511bb62822665410 710 Pfam PF00270 DEAD/DEAH box helicase 32 199 8.9E-16 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMIS_5300 3ca7d2e7442d8fa0511bb62822665410 710 SUPERFAMILY SSF53271 635 707 4.12E-8 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like AMIS_5300 3ca7d2e7442d8fa0511bb62822665410 710 Pfam PF00271 Helicase conserved C-terminal domain 251 344 5.5E-13 T 14-10-2018 IPR001650 Helicase, C-terminal AMIS_75420 7cac3485041689e735bfaada68e0d627 286 SMART SM00481 4 68 8.2E-14 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal AMIS_75420 7cac3485041689e735bfaada68e0d627 286 Gene3D G3DSA:1.10.150.650 103 173 3.0E-75 T 14-10-2018 AMIS_75420 7cac3485041689e735bfaada68e0d627 286 SUPERFAMILY SSF89550 4 266 2.94E-43 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AMIS_75420 7cac3485041689e735bfaada68e0d627 286 Gene3D G3DSA:3.20.20.140 4 254 3.0E-75 T 14-10-2018 AMIS_17350 0dda5579425cd5ce02a063fc93370a94 575 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 146 158 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 AMIS_17350 0dda5579425cd5ce02a063fc93370a94 575 SMART SM00220 21 282 1.4E-36 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMIS_17350 0dda5579425cd5ce02a063fc93370a94 575 Gene3D G3DSA:1.10.510.10 105 286 2.4E-37 T 14-10-2018 AMIS_17350 0dda5579425cd5ce02a063fc93370a94 575 Pfam PF00069 Protein kinase domain 21 274 2.6E-36 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMIS_17350 0dda5579425cd5ce02a063fc93370a94 575 Gene3D G3DSA:3.30.200.20 5 104 1.3E-19 T 14-10-2018 AMIS_17350 0dda5579425cd5ce02a063fc93370a94 575 SUPERFAMILY SSF56112 13 324 5.91E-58 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMIS_61640 3d5359359acf008754c8e0bce21be071 394 SUPERFAMILY SSF55931 26 384 4.32E-36 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AMIS_61640 3d5359359acf008754c8e0bce21be071 394 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 79 323 2.6E-43 T 14-10-2018 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AMIS_61640 3d5359359acf008754c8e0bce21be071 394 Gene3D G3DSA:3.30.590.20 6 391 2.5E-92 T 14-10-2018 AMIS_61640 3d5359359acf008754c8e0bce21be071 394 PIRSF PIRSF017901 4 394 3.6E-88 T 14-10-2018 IPR035434 Glutamate--cysteine ligase, bacteria and plant GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AMIS_61640 3d5359359acf008754c8e0bce21be071 394 Hamap MF_02034 Glutamate--cysteine ligase EgtA [egtA]. 10 394 32.557 T 14-10-2018 IPR017809 Glutamate--cysteine ligase EgtA, Actinobacteria GO:0004357|GO:0052699 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AMIS_70710 e86d12704682d50bdaeab1a3fd4b190b 159 Pfam PF01467 Cytidylyltransferase-like 6 131 4.5E-19 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AMIS_70710 e86d12704682d50bdaeab1a3fd4b190b 159 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 3 154 1.2E-55 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AMIS_70710 e86d12704682d50bdaeab1a3fd4b190b 159 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 2 157 33.507 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AMIS_70710 e86d12704682d50bdaeab1a3fd4b190b 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 49 73 1.9E-48 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AMIS_70710 e86d12704682d50bdaeab1a3fd4b190b 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 111 133 1.9E-48 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AMIS_70710 e86d12704682d50bdaeab1a3fd4b190b 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 20 41 1.9E-48 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AMIS_70710 e86d12704682d50bdaeab1a3fd4b190b 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 85 101 1.9E-48 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AMIS_70710 e86d12704682d50bdaeab1a3fd4b190b 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 2 20 1.9E-48 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AMIS_70710 e86d12704682d50bdaeab1a3fd4b190b 159 SUPERFAMILY SSF52374 1 153 2.0E-40 T 14-10-2018 AMIS_70710 e86d12704682d50bdaeab1a3fd4b190b 159 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 58 3.0E-16 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AMIS_70710 e86d12704682d50bdaeab1a3fd4b190b 159 Gene3D G3DSA:3.40.50.620 1 158 2.5E-50 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMIS_59050 0413d0aadc29e28cfeb8cf30926d34cd 579 Gene3D G3DSA:2.40.30.10 171 272 1.7E-21 T 14-10-2018 AMIS_59050 0413d0aadc29e28cfeb8cf30926d34cd 579 Pfam PF00009 Elongation factor Tu GTP binding domain 4 129 4.3E-19 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_59050 0413d0aadc29e28cfeb8cf30926d34cd 579 Pfam PF09107 Elongation factor SelB, winged helix 531 576 2.5E-15 T 14-10-2018 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 AMIS_59050 0413d0aadc29e28cfeb8cf30926d34cd 579 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 3 339 6.0E-73 T 14-10-2018 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 AMIS_59050 0413d0aadc29e28cfeb8cf30926d34cd 579 SUPERFAMILY SSF52540 2 190 5.52E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_59050 0413d0aadc29e28cfeb8cf30926d34cd 579 Gene3D G3DSA:3.40.50.300 2 166 1.6E-35 T 14-10-2018 AMIS_59050 0413d0aadc29e28cfeb8cf30926d34cd 579 SUPERFAMILY SSF46785 530 575 2.67E-6 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_59050 0413d0aadc29e28cfeb8cf30926d34cd 579 SUPERFAMILY SSF50447 172 258 2.91E-16 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AMIS_59050 0413d0aadc29e28cfeb8cf30926d34cd 579 Gene3D G3DSA:1.10.10.10 523 577 1.1E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_34570 ea297e0306e765228025519a64e1dea7 268 Gene3D G3DSA:3.10.620.30 88 173 9.7E-9 T 14-10-2018 AMIS_34570 ea297e0306e765228025519a64e1dea7 268 Pfam PF01841 Transglutaminase-like superfamily 93 149 3.8E-9 T 14-10-2018 IPR002931 Transglutaminase-like AMIS_34570 ea297e0306e765228025519a64e1dea7 268 SUPERFAMILY SSF54001 94 154 3.5E-15 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily AMIS_68370 a8e642708320bdff1e73aa47b058c1b2 405 SMART SM00387 279 390 1.4E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_68370 a8e642708320bdff1e73aa47b058c1b2 405 SMART SM00388 166 233 2.0E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_68370 a8e642708320bdff1e73aa47b058c1b2 405 SUPERFAMILY SSF55874 227 388 6.81E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_68370 a8e642708320bdff1e73aa47b058c1b2 405 Pfam PF00512 His Kinase A (phospho-acceptor) domain 166 232 2.5E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_68370 a8e642708320bdff1e73aa47b058c1b2 405 Pfam PF00672 HAMP domain 113 161 4.4E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_68370 a8e642708320bdff1e73aa47b058c1b2 405 SUPERFAMILY SSF47384 149 232 5.69E-17 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_68370 a8e642708320bdff1e73aa47b058c1b2 405 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 387 4.0E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_68370 a8e642708320bdff1e73aa47b058c1b2 405 PRINTS PR00344 Bacterial sensor protein C-terminal signature 334 344 4.0E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_68370 a8e642708320bdff1e73aa47b058c1b2 405 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 368 4.0E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_68370 a8e642708320bdff1e73aa47b058c1b2 405 SMART SM00304 112 165 1.1E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_68370 a8e642708320bdff1e73aa47b058c1b2 405 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 279 388 2.2E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_68370 a8e642708320bdff1e73aa47b058c1b2 405 Gene3D G3DSA:1.10.287.130 116 232 9.3E-29 T 14-10-2018 AMIS_68370 a8e642708320bdff1e73aa47b058c1b2 405 SUPERFAMILY SSF158472 114 162 1.24E-8 T 14-10-2018 AMIS_68370 a8e642708320bdff1e73aa47b058c1b2 405 Gene3D G3DSA:3.30.565.10 233 389 3.1E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_6050 37ca559320b87c1cbb4374dde3ee6a9b 100 Pfam PF00276 Ribosomal protein L23 9 93 7.5E-31 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 AMIS_6050 37ca559320b87c1cbb4374dde3ee6a9b 100 SUPERFAMILY SSF54189 5 97 1.04E-30 T 14-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_6050 37ca559320b87c1cbb4374dde3ee6a9b 100 Gene3D G3DSA:3.30.70.330 7 97 5.3E-31 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily AMIS_6050 37ca559320b87c1cbb4374dde3ee6a9b 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 97 20.617 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 AMIS_76890 fcae2f02ef4461a445f364488c497cd8 361 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 154 357 4.1E-25 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_76890 fcae2f02ef4461a445f364488c497cd8 361 Gene3D G3DSA:1.10.3720.10 134 358 1.3E-33 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_76890 fcae2f02ef4461a445f364488c497cd8 361 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 82 358 1.2E-83 T 14-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 AMIS_76890 fcae2f02ef4461a445f364488c497cd8 361 SUPERFAMILY SSF161098 91 349 3.4E-42 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_9660 1daf7b914b3cdb83dc6bf13b2812f395 162 Pfam PF07291 Methylamine utilisation protein MauE 8 141 4.5E-11 T 14-10-2018 IPR009908 Methylamine utilisation protein, MauE GO:0016021|GO:0030416 AMIS_57930 47bfe5c328de84b0b718186b378eb8fa 295 Pfam PF01066 CDP-alcohol phosphatidyltransferase 44 111 7.2E-9 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AMIS_57930 47bfe5c328de84b0b718186b378eb8fa 295 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 89 111 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AMIS_57930 47bfe5c328de84b0b718186b378eb8fa 295 Gene3D G3DSA:1.20.120.1760 14 182 3.9E-32 T 14-10-2018 AMIS_37210 e2a776fd99999e5a3f85040ba52cee94 385 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 119 5.1E-34 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMIS_37210 e2a776fd99999e5a3f85040ba52cee94 385 Gene3D G3DSA:2.40.110.10 123 239 4.7E-39 T 14-10-2018 AMIS_37210 e2a776fd99999e5a3f85040ba52cee94 385 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 223 2.2E-25 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMIS_37210 e2a776fd99999e5a3f85040ba52cee94 385 SUPERFAMILY SSF47203 233 383 1.93E-47 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMIS_37210 e2a776fd99999e5a3f85040ba52cee94 385 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 235 383 1.2E-43 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMIS_37210 e2a776fd99999e5a3f85040ba52cee94 385 PIRSF PIRSF016578 33 233 2.3E-4 T 14-10-2018 AMIS_37210 e2a776fd99999e5a3f85040ba52cee94 385 PIRSF PIRSF016578 244 381 1.4E-8 T 14-10-2018 AMIS_37210 e2a776fd99999e5a3f85040ba52cee94 385 Gene3D G3DSA:1.20.140.10 240 383 4.2E-46 T 14-10-2018 AMIS_37210 e2a776fd99999e5a3f85040ba52cee94 385 Gene3D G3DSA:1.10.540.10 2 120 6.5E-35 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMIS_37210 e2a776fd99999e5a3f85040ba52cee94 385 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 342 361 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AMIS_37210 e2a776fd99999e5a3f85040ba52cee94 385 SUPERFAMILY SSF56645 5 246 3.53E-80 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMIS_78500 252e3272ba9c8eeebf258a80998a2e4b 197 Pfam PF13662 Toprim domain 80 170 2.2E-23 T 14-10-2018 IPR006171 TOPRIM domain AMIS_78500 252e3272ba9c8eeebf258a80998a2e4b 197 Pfam PF00633 Helix-hairpin-helix motif 2 27 1.1E-5 T 14-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 AMIS_78500 252e3272ba9c8eeebf258a80998a2e4b 197 Hamap MF_00017 Recombination protein RecR [recR]. 1 197 101.951 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 AMIS_78500 252e3272ba9c8eeebf258a80998a2e4b 197 Gene3D G3DSA:3.40.1360.10 76 197 2.2E-45 T 14-10-2018 AMIS_78500 252e3272ba9c8eeebf258a80998a2e4b 197 Gene3D G3DSA:1.10.8.420 1 51 1.9E-20 T 14-10-2018 AMIS_78500 252e3272ba9c8eeebf258a80998a2e4b 197 TIGRFAM TIGR00615 recR: recombination protein RecR 2 195 1.2E-80 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 AMIS_78500 252e3272ba9c8eeebf258a80998a2e4b 197 SMART SM00493 79 164 3.7E-17 T 14-10-2018 IPR006171 TOPRIM domain AMIS_78500 252e3272ba9c8eeebf258a80998a2e4b 197 SUPERFAMILY SSF111304 2 197 4.32E-72 T 14-10-2018 IPR023627 Recombination protein RecR AMIS_78500 252e3272ba9c8eeebf258a80998a2e4b 197 Pfam PF02132 RecR protein 38 76 4.9E-13 T 14-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger AMIS_54140 d51496f43c12e03c5e46c580cb21d13b 125 Gene3D G3DSA:1.25.40.20 11 117 1.6E-21 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily AMIS_54140 d51496f43c12e03c5e46c580cb21d13b 125 Pfam PF12796 Ankyrin repeats (3 copies) 35 103 5.9E-9 T 14-10-2018 IPR020683 Ankyrin repeat-containing domain AMIS_54140 d51496f43c12e03c5e46c580cb21d13b 125 SMART SM00248 75 104 0.26 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 AMIS_54140 d51496f43c12e03c5e46c580cb21d13b 125 SMART SM00248 42 71 0.0077 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 AMIS_54140 d51496f43c12e03c5e46c580cb21d13b 125 SUPERFAMILY SSF48403 31 104 7.31E-18 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily AMIS_730 1cfe04cf9fb3757c13d605bcd55224cc 601 Gene3D G3DSA:2.120.10.30 314 428 1.9E-14 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AMIS_730 1cfe04cf9fb3757c13d605bcd55224cc 601 SUPERFAMILY SSF52833 10 148 1.02E-29 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMIS_730 1cfe04cf9fb3757c13d605bcd55224cc 601 Gene3D G3DSA:2.120.10.30 174 311 3.3E-7 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AMIS_730 1cfe04cf9fb3757c13d605bcd55224cc 601 SUPERFAMILY SSF101898 166 466 4.45E-26 T 14-10-2018 AMIS_730 1cfe04cf9fb3757c13d605bcd55224cc 601 Gene3D G3DSA:3.40.30.10 4 158 4.6E-34 T 14-10-2018 AMIS_730 1cfe04cf9fb3757c13d605bcd55224cc 601 Pfam PF01436 NHL repeat 398 425 9.9E-6 T 14-10-2018 IPR001258 NHL repeat GO:0005515 AMIS_730 1cfe04cf9fb3757c13d605bcd55224cc 601 Pfam PF00578 AhpC/TSA family 9 128 1.1E-8 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AMIS_62860 693c2edb26d3301e62c75e71330f9fa1 298 Gene3D G3DSA:3.20.20.70 5 298 4.2E-151 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_62860 693c2edb26d3301e62c75e71330f9fa1 298 ProSitePatterns PS01235 PdxS/SNZ family signature. 209 227 - T 14-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 AMIS_62860 693c2edb26d3301e62c75e71330f9fa1 298 SUPERFAMILY SSF51366 22 271 4.28E-62 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AMIS_62860 693c2edb26d3301e62c75e71330f9fa1 298 Pfam PF01680 SOR/SNZ family 11 216 2.0E-107 T 14-10-2018 IPR033755 PdxS/SNZ N-terminal domain KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 AMIS_62860 693c2edb26d3301e62c75e71330f9fa1 298 TIGRFAM TIGR00343 TIGR00343: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 13 298 3.4E-145 T 14-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 AMIS_62860 693c2edb26d3301e62c75e71330f9fa1 298 Hamap MF_01824 Pyridoxal 5'-phosphate synthase subunit PdxS [pdxS]. 8 298 52.958 T 14-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 AMIS_62860 693c2edb26d3301e62c75e71330f9fa1 298 PIRSF PIRSF029271 1 298 7.9E-150 T 14-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 AMIS_52590 88b249af5dc3f258d32b57e1fc9ebc98 428 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 13 252 2.9E-107 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AMIS_52590 88b249af5dc3f258d32b57e1fc9ebc98 428 SUPERFAMILY SSF51621 12 428 1.61E-154 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AMIS_52590 88b249af5dc3f258d32b57e1fc9ebc98 428 PIRSF PIRSF001362 2 428 1.9E-231 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AMIS_52590 88b249af5dc3f258d32b57e1fc9ebc98 428 Gene3D G3DSA:3.20.20.60 11 412 8.5E-168 T 14-10-2018 AMIS_52590 88b249af5dc3f258d32b57e1fc9ebc98 428 Pfam PF00463 Isocitrate lyase family 253 423 1.0E-42 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AMIS_52590 88b249af5dc3f258d32b57e1fc9ebc98 428 Pfam PF00463 Isocitrate lyase family 17 252 2.9E-55 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AMIS_52590 88b249af5dc3f258d32b57e1fc9ebc98 428 ProSitePatterns PS00161 Isocitrate lyase signature. 190 195 - T 14-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 AMIS_72190 13f51cf130523acd6b4315be8d9ae4bc 1073 Gene3D G3DSA:1.20.1640.10 502 1002 1.5E-288 T 14-10-2018 AMIS_72190 13f51cf130523acd6b4315be8d9ae4bc 1073 Gene3D G3DSA:3.30.70.1320 132 321 1.5E-288 T 14-10-2018 AMIS_72190 13f51cf130523acd6b4315be8d9ae4bc 1073 Gene3D G3DSA:3.30.70.1430 556 653 1.5E-288 T 14-10-2018 AMIS_72190 13f51cf130523acd6b4315be8d9ae4bc 1073 SUPERFAMILY SSF82714 702 784 3.53E-9 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMIS_72190 13f51cf130523acd6b4315be8d9ae4bc 1073 SUPERFAMILY SSF82693 556 644 8.37E-5 T 14-10-2018 AMIS_72190 13f51cf130523acd6b4315be8d9ae4bc 1073 Pfam PF00873 AcrB/AcrD/AcrF family 5 1005 5.8E-228 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMIS_72190 13f51cf130523acd6b4315be8d9ae4bc 1073 SUPERFAMILY SSF82866 783 1011 1.44E-52 T 14-10-2018 AMIS_72190 13f51cf130523acd6b4315be8d9ae4bc 1073 SUPERFAMILY SSF82693 41 129 5.93E-26 T 14-10-2018 AMIS_72190 13f51cf130523acd6b4315be8d9ae4bc 1073 Gene3D G3DSA:1.20.1640.10 14 501 1.5E-288 T 14-10-2018 AMIS_72190 13f51cf130523acd6b4315be8d9ae4bc 1073 Gene3D G3DSA:3.30.2090.10 177 266 1.5E-288 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMIS_72190 13f51cf130523acd6b4315be8d9ae4bc 1073 Gene3D G3DSA:3.30.70.1430 41 795 1.5E-288 T 14-10-2018 AMIS_72190 13f51cf130523acd6b4315be8d9ae4bc 1073 Gene3D G3DSA:3.30.2090.10 701 787 1.5E-288 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMIS_72190 13f51cf130523acd6b4315be8d9ae4bc 1073 SUPERFAMILY SSF82693 135 315 3.56E-11 T 14-10-2018 AMIS_72190 13f51cf130523acd6b4315be8d9ae4bc 1073 Gene3D G3DSA:3.30.70.1440 654 844 1.5E-288 T 14-10-2018 AMIS_72190 13f51cf130523acd6b4315be8d9ae4bc 1073 SUPERFAMILY SSF82866 288 486 4.84E-45 T 14-10-2018 AMIS_72190 13f51cf130523acd6b4315be8d9ae4bc 1073 SUPERFAMILY SSF82714 182 260 4.32E-10 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMIS_72190 13f51cf130523acd6b4315be8d9ae4bc 1073 PRINTS PR00702 Acriflavin resistance protein family signature 325 348 5.5E-42 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMIS_72190 13f51cf130523acd6b4315be8d9ae4bc 1073 PRINTS PR00702 Acriflavin resistance protein family signature 433 456 5.5E-42 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMIS_72190 13f51cf130523acd6b4315be8d9ae4bc 1073 PRINTS PR00702 Acriflavin resistance protein family signature 458 481 5.5E-42 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMIS_72190 13f51cf130523acd6b4315be8d9ae4bc 1073 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 5.5E-42 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMIS_72190 13f51cf130523acd6b4315be8d9ae4bc 1073 PRINTS PR00702 Acriflavin resistance protein family signature 352 373 5.5E-42 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMIS_72190 13f51cf130523acd6b4315be8d9ae4bc 1073 PRINTS PR00702 Acriflavin resistance protein family signature 380 404 5.5E-42 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMIS_8530 e324716f7bdfa18a40833b7e7a46863d 320 Pfam PF01996 F420-0:Gamma-glutamyl ligase 83 209 3.8E-33 T 14-10-2018 IPR002847 Coenzyme F420:L-glutamate ligase-like domain KEGG: 00680+6.3.2.31+6.3.2.34|MetaCyc: PWY-5199 AMIS_8530 e324716f7bdfa18a40833b7e7a46863d 320 Pfam PF01996 F420-0:Gamma-glutamyl ligase 12 55 3.4E-8 T 14-10-2018 IPR002847 Coenzyme F420:L-glutamate ligase-like domain KEGG: 00680+6.3.2.31+6.3.2.34|MetaCyc: PWY-5199 AMIS_8530 e324716f7bdfa18a40833b7e7a46863d 320 SUPERFAMILY SSF144010 4 238 3.66E-68 T 14-10-2018 AMIS_8530 e324716f7bdfa18a40833b7e7a46863d 320 Gene3D G3DSA:3.30.1330.100 7 219 2.6E-70 T 14-10-2018 AMIS_8530 e324716f7bdfa18a40833b7e7a46863d 320 Gene3D G3DSA:3.90.1660.10 51 232 2.6E-70 T 14-10-2018 AMIS_8530 e324716f7bdfa18a40833b7e7a46863d 320 TIGRFAM TIGR01916 F420_cofE: coenzyme F420-0:L-glutamate ligase 4 232 5.4E-75 T 14-10-2018 IPR008225 Coenzyme F420:L-glutamate ligase GO:0043773|GO:0046872|GO:0051188 KEGG: 00680+6.3.2.31+6.3.2.34|MetaCyc: PWY-5199 AMIS_30440 4c67d43cce77ebbe96ed7974b5a1881b 720 Gene3D G3DSA:1.20.1640.10 174 342 2.6E-9 T 14-10-2018 AMIS_30440 4c67d43cce77ebbe96ed7974b5a1881b 720 SUPERFAMILY SSF82866 142 334 3.79E-28 T 14-10-2018 AMIS_30440 4c67d43cce77ebbe96ed7974b5a1881b 720 Gene3D G3DSA:1.20.1640.10 499 693 3.6E-5 T 14-10-2018 AMIS_30440 4c67d43cce77ebbe96ed7974b5a1881b 720 Pfam PF03176 MMPL family 78 369 5.4E-44 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 AMIS_30440 4c67d43cce77ebbe96ed7974b5a1881b 720 Pfam PF03176 MMPL family 454 697 1.4E-33 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 AMIS_30440 4c67d43cce77ebbe96ed7974b5a1881b 720 SUPERFAMILY SSF82866 475 690 7.46E-25 T 14-10-2018 AMIS_60890 eba4d1e494279665c2b116586648d6fc 564 Gene3D G3DSA:3.40.50.300 1 292 1.2E-132 T 14-10-2018 AMIS_60890 eba4d1e494279665c2b116586648d6fc 564 Pfam PF06418 CTP synthase N-terminus 5 273 1.2E-121 T 14-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 AMIS_60890 eba4d1e494279665c2b116586648d6fc 564 Pfam PF00117 Glutamine amidotransferase class-I 308 540 7.2E-49 T 14-10-2018 IPR017926 Glutamine amidotransferase AMIS_60890 eba4d1e494279665c2b116586648d6fc 564 Hamap MF_01227 CTP synthase [pyrG]. 4 545 50.125 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 AMIS_60890 eba4d1e494279665c2b116586648d6fc 564 Gene3D G3DSA:3.40.50.880 293 547 1.1E-99 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_60890 eba4d1e494279665c2b116586648d6fc 564 TIGRFAM TIGR00337 PyrG: CTP synthase 4 540 8.0E-233 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 AMIS_60890 eba4d1e494279665c2b116586648d6fc 564 SUPERFAMILY SSF52540 4 273 1.29E-118 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_60890 eba4d1e494279665c2b116586648d6fc 564 SUPERFAMILY SSF52317 295 544 5.35E-74 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_18560 e9fe2abbb6426759e576dce64b95880d 786 SUPERFAMILY SSF48168 21 223 7.19E-54 T 14-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMIS_18560 e9fe2abbb6426759e576dce64b95880d 786 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 588 610 - T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMIS_18560 e9fe2abbb6426759e576dce64b95880d 786 PRINTS PR01183 Ribonucleotide reductase large chain signature 301 320 1.2E-49 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMIS_18560 e9fe2abbb6426759e576dce64b95880d 786 PRINTS PR01183 Ribonucleotide reductase large chain signature 506 528 1.2E-49 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMIS_18560 e9fe2abbb6426759e576dce64b95880d 786 PRINTS PR01183 Ribonucleotide reductase large chain signature 431 442 1.2E-49 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMIS_18560 e9fe2abbb6426759e576dce64b95880d 786 PRINTS PR01183 Ribonucleotide reductase large chain signature 599 626 1.2E-49 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMIS_18560 e9fe2abbb6426759e576dce64b95880d 786 PRINTS PR01183 Ribonucleotide reductase large chain signature 468 491 1.2E-49 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMIS_18560 e9fe2abbb6426759e576dce64b95880d 786 PRINTS PR01183 Ribonucleotide reductase large chain signature 534 557 1.2E-49 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMIS_18560 e9fe2abbb6426759e576dce64b95880d 786 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 150 221 5.2E-17 T 14-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMIS_18560 e9fe2abbb6426759e576dce64b95880d 786 SUPERFAMILY SSF51998 224 749 2.11E-169 T 14-10-2018 AMIS_18560 e9fe2abbb6426759e576dce64b95880d 786 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 153 748 3.3E-213 T 14-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMIS_18560 e9fe2abbb6426759e576dce64b95880d 786 Pfam PF03477 ATP cone domain 16 95 4.3E-13 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 AMIS_18560 e9fe2abbb6426759e576dce64b95880d 786 Gene3D G3DSA:3.20.70.20 87 755 5.3E-240 T 14-10-2018 AMIS_18560 e9fe2abbb6426759e576dce64b95880d 786 Pfam PF02867 Ribonucleotide reductase, barrel domain 225 744 8.4E-174 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMIS_71480 af7714f8a9daaa6f185f67836ad647ee 540 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 378 525 3.2E-29 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AMIS_71480 af7714f8a9daaa6f185f67836ad647ee 540 SUPERFAMILY SSF52518 8 177 1.96E-38 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold AMIS_71480 af7714f8a9daaa6f185f67836ad647ee 540 SUPERFAMILY SSF52467 187 339 1.37E-30 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AMIS_71480 af7714f8a9daaa6f185f67836ad647ee 540 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 9 174 9.3E-42 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AMIS_71480 af7714f8a9daaa6f185f67836ad647ee 540 Gene3D G3DSA:3.40.50.970 3 186 3.8E-47 T 14-10-2018 AMIS_71480 af7714f8a9daaa6f185f67836ad647ee 540 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 192 317 2.1E-21 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AMIS_71480 af7714f8a9daaa6f185f67836ad647ee 540 Gene3D G3DSA:3.40.50.970 352 538 3.6E-52 T 14-10-2018 AMIS_71480 af7714f8a9daaa6f185f67836ad647ee 540 SUPERFAMILY SSF52518 354 534 3.04E-49 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold AMIS_71480 af7714f8a9daaa6f185f67836ad647ee 540 Gene3D G3DSA:3.40.50.1220 187 346 4.5E-33 T 14-10-2018 AMIS_76070 e783455296cf1339c898b6edd418e2aa 138 SUPERFAMILY SSF52172 19 137 6.55E-24 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_76070 e783455296cf1339c898b6edd418e2aa 138 Pfam PF00072 Response regulator receiver domain 23 133 3.2E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_76070 e783455296cf1339c898b6edd418e2aa 138 SMART SM00448 21 133 2.7E-12 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_76070 e783455296cf1339c898b6edd418e2aa 138 Gene3D G3DSA:3.40.50.2300 17 138 4.4E-22 T 14-10-2018 AMIS_81080 41a39694089bfca98f400b0abca97be0 527 SMART SM00220 46 274 5.8E-5 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMIS_81080 41a39694089bfca98f400b0abca97be0 527 Pfam PF00069 Protein kinase domain 96 184 4.7E-10 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMIS_81080 41a39694089bfca98f400b0abca97be0 527 Gene3D G3DSA:2.60.120.260 383 526 5.2E-6 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_81080 41a39694089bfca98f400b0abca97be0 527 Gene3D G3DSA:1.10.510.10 126 276 1.2E-38 T 14-10-2018 AMIS_81080 41a39694089bfca98f400b0abca97be0 527 Gene3D G3DSA:3.30.200.20 2 125 1.4E-10 T 14-10-2018 AMIS_81080 41a39694089bfca98f400b0abca97be0 527 SUPERFAMILY SSF56112 42 251 1.36E-23 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMIS_21740 64ea28e0f7ebb5c291af0fefdbbb4003 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 65 3.0E-16 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_21740 64ea28e0f7ebb5c291af0fefdbbb4003 197 SUPERFAMILY SSF46689 9 71 5.99E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_21740 64ea28e0f7ebb5c291af0fefdbbb4003 197 Gene3D G3DSA:1.10.10.60 4 57 1.9E-20 T 14-10-2018 AMIS_21740 64ea28e0f7ebb5c291af0fefdbbb4003 197 SUPERFAMILY SSF48498 77 196 1.48E-17 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_21740 64ea28e0f7ebb5c291af0fefdbbb4003 197 Gene3D G3DSA:1.10.357.10 58 197 1.2E-24 T 14-10-2018 AMIS_21740 64ea28e0f7ebb5c291af0fefdbbb4003 197 Pfam PF16859 Bacterial transcriptional repressor C-terminal 76 178 1.0E-19 T 14-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AMIS_21740 64ea28e0f7ebb5c291af0fefdbbb4003 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 5.3E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_21740 64ea28e0f7ebb5c291af0fefdbbb4003 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 5.3E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_12220 cb42ae1bd1a270ec1512b0d680af2fbd 118 Gene3D G3DSA:3.10.180.10 1 117 7.9E-36 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_12220 cb42ae1bd1a270ec1512b0d680af2fbd 118 SUPERFAMILY SSF54593 1 113 8.8E-16 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_42490 69b1d5053d85887342404e5594cc1531 166 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 57 117 3.3E-8 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMIS_42490 69b1d5053d85887342404e5594cc1531 166 SUPERFAMILY SSF56003 55 151 3.53E-27 T 14-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 AMIS_42490 69b1d5053d85887342404e5594cc1531 166 Gene3D G3DSA:3.30.365.10 33 162 7.0E-22 T 14-10-2018 AMIS_22850 c21d55bc2c1683638799c4f30233fa17 466 Gene3D G3DSA:1.20.1740.10 7 454 4.6E-52 T 14-10-2018 AMIS_22850 c21d55bc2c1683638799c4f30233fa17 466 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 7 466 2.4E-142 T 14-10-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 AMIS_22850 c21d55bc2c1683638799c4f30233fa17 466 Pfam PF13520 Amino acid permease 12 406 9.3E-60 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AMIS_22850 c21d55bc2c1683638799c4f30233fa17 466 PIRSF PIRSF006060 3 466 1.4E-41 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AMIS_64090 5ef756f055123466efa095b6a6691435 367 Pfam PF07995 Glucose / Sorbosone dehydrogenase 71 351 2.4E-70 T 14-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase AMIS_64090 5ef756f055123466efa095b6a6691435 367 SUPERFAMILY SSF50952 57 349 5.23E-46 T 14-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 AMIS_64090 5ef756f055123466efa095b6a6691435 367 Gene3D G3DSA:2.120.10.30 40 366 1.6E-120 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AMIS_61750 e3eb3772eec380a735d1622831d1c4cf 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 8 243 2.4E-52 T 14-10-2018 AMIS_61750 e3eb3772eec380a735d1622831d1c4cf 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 1.3E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_61750 e3eb3772eec380a735d1622831d1c4cf 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 1.3E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_61750 e3eb3772eec380a735d1622831d1c4cf 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 1.3E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_61750 e3eb3772eec380a735d1622831d1c4cf 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 1.3E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_61750 e3eb3772eec380a735d1622831d1c4cf 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 1.3E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_61750 e3eb3772eec380a735d1622831d1c4cf 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 1.3E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_61750 e3eb3772eec380a735d1622831d1c4cf 245 Gene3D G3DSA:3.40.50.720 2 244 2.5E-68 T 14-10-2018 AMIS_61750 e3eb3772eec380a735d1622831d1c4cf 245 SUPERFAMILY SSF51735 4 244 4.86E-69 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_66500 2f7e871bc56235f6b1133eca252456a7 268 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 31 254 2.1E-35 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 AMIS_66500 2f7e871bc56235f6b1133eca252456a7 268 SUPERFAMILY SSF51695 24 259 1.62E-62 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 AMIS_66500 2f7e871bc56235f6b1133eca252456a7 268 Gene3D G3DSA:3.20.20.190 26 263 5.8E-68 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 AMIS_44490 9567d8824a75ce4392b23dc7d09eae28 242 SMART SM00342 140 219 4.5E-5 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMIS_44490 9567d8824a75ce4392b23dc7d09eae28 242 Pfam PF12833 Helix-turn-helix domain 146 219 7.4E-12 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMIS_44490 9567d8824a75ce4392b23dc7d09eae28 242 Gene3D G3DSA:1.10.10.60 142 222 7.5E-12 T 14-10-2018 AMIS_56530 d88272dbbce37fab2d03274dd4a1a844 305 SUPERFAMILY SSF51735 7 261 7.13E-62 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_56530 d88272dbbce37fab2d03274dd4a1a844 305 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 13 192 2.5E-5 T 14-10-2018 AMIS_56530 d88272dbbce37fab2d03274dd4a1a844 305 Gene3D G3DSA:3.40.50.720 9 296 5.8E-69 T 14-10-2018 AMIS_56530 d88272dbbce37fab2d03274dd4a1a844 305 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 3.9E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_56530 d88272dbbce37fab2d03274dd4a1a844 305 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 3.9E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_56530 d88272dbbce37fab2d03274dd4a1a844 305 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 3.9E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_56530 d88272dbbce37fab2d03274dd4a1a844 305 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 21 253 2.9E-47 T 14-10-2018 AMIS_56530 d88272dbbce37fab2d03274dd4a1a844 305 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 2.1E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_56530 d88272dbbce37fab2d03274dd4a1a844 305 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 2.1E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_56530 d88272dbbce37fab2d03274dd4a1a844 305 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 2.1E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_56530 d88272dbbce37fab2d03274dd4a1a844 305 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 2.1E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_56530 d88272dbbce37fab2d03274dd4a1a844 305 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 2.1E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_56530 d88272dbbce37fab2d03274dd4a1a844 305 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 2.1E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_56530 d88272dbbce37fab2d03274dd4a1a844 305 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMIS_9080 8d08fbfe00af74f70aaccfad53c4ae7a 443 SUPERFAMILY SSF103473 5 406 1.96E-54 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_9080 8d08fbfe00af74f70aaccfad53c4ae7a 443 Gene3D G3DSA:1.20.1250.20 2 413 8.3E-48 T 14-10-2018 AMIS_9080 8d08fbfe00af74f70aaccfad53c4ae7a 443 Pfam PF07690 Major Facilitator Superfamily 15 342 2.3E-28 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_48640 0ed7c8158c5757c6f7ebdfe65c9be9a4 502 Pfam PF13520 Amino acid permease 29 429 1.2E-20 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AMIS_48640 0ed7c8158c5757c6f7ebdfe65c9be9a4 502 PIRSF PIRSF006060 2 477 2.0E-43 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AMIS_48640 0ed7c8158c5757c6f7ebdfe65c9be9a4 502 Gene3D G3DSA:1.20.1740.10 23 465 2.9E-34 T 14-10-2018 AMIS_45200 8a12a7ba4a3e75030663237b028a1ce7 439 SUPERFAMILY SSF46894 4 78 4.54E-12 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_45200 8a12a7ba4a3e75030663237b028a1ce7 439 Gene3D G3DSA:1.25.40.10 93 258 2.7E-40 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_45200 8a12a7ba4a3e75030663237b028a1ce7 439 SUPERFAMILY SSF48452 92 254 5.96E-32 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_45200 8a12a7ba4a3e75030663237b028a1ce7 439 Pfam PF13401 AAA domain 298 386 4.2E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_45200 8a12a7ba4a3e75030663237b028a1ce7 439 SMART SM01043 95 240 4.7E-35 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain AMIS_45200 8a12a7ba4a3e75030663237b028a1ce7 439 SMART SM00862 17 88 1.9E-5 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_45200 8a12a7ba4a3e75030663237b028a1ce7 439 Gene3D G3DSA:1.10.10.10 1 90 2.8E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_45200 8a12a7ba4a3e75030663237b028a1ce7 439 Pfam PF03704 Bacterial transcriptional activator domain 95 239 1.7E-36 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain AMIS_45200 8a12a7ba4a3e75030663237b028a1ce7 439 Gene3D G3DSA:3.40.50.300 263 417 4.3E-22 T 14-10-2018 AMIS_45200 8a12a7ba4a3e75030663237b028a1ce7 439 SUPERFAMILY SSF52540 270 411 1.45E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_45200 8a12a7ba4a3e75030663237b028a1ce7 439 Pfam PF00486 Transcriptional regulatory protein, C terminal 26 78 4.8E-5 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_42620 be3238fef12ff6742349ef1c40ad38c2 646 Pfam PF00149 Calcineurin-like phosphoesterase 253 462 4.0E-11 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AMIS_42620 be3238fef12ff6742349ef1c40ad38c2 646 SUPERFAMILY SSF56300 184 505 2.48E-35 T 14-10-2018 AMIS_42620 be3238fef12ff6742349ef1c40ad38c2 646 Gene3D G3DSA:3.60.21.10 236 518 4.5E-45 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like AMIS_62390 4aa2ee0eea8c32a24ce4407336e0c2ec 420 ProSitePatterns PS00216 Sugar transport proteins signature 1. 60 77 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AMIS_62390 4aa2ee0eea8c32a24ce4407336e0c2ec 420 SUPERFAMILY SSF103473 9 405 5.75E-33 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_62390 4aa2ee0eea8c32a24ce4407336e0c2ec 420 Gene3D G3DSA:1.20.1250.20 5 400 1.1E-27 T 14-10-2018 AMIS_62390 4aa2ee0eea8c32a24ce4407336e0c2ec 420 Pfam PF07690 Major Facilitator Superfamily 14 368 1.1E-13 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_29600 1ddb726539578636ee2d1f82f6d9b691 221 Gene3D G3DSA:1.10.10.10 2 74 8.2E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_29600 1ddb726539578636ee2d1f82f6d9b691 221 SMART SM00345 16 74 5.5E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_29600 1ddb726539578636ee2d1f82f6d9b691 221 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 68 2.6E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_29600 1ddb726539578636ee2d1f82f6d9b691 221 SMART SM00895 85 209 1.7E-17 T 14-10-2018 IPR011711 GntR, C-terminal AMIS_29600 1ddb726539578636ee2d1f82f6d9b691 221 Pfam PF07729 FCD domain 85 208 2.3E-22 T 14-10-2018 IPR011711 GntR, C-terminal AMIS_29600 1ddb726539578636ee2d1f82f6d9b691 221 SUPERFAMILY SSF48008 81 217 9.42E-22 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AMIS_29600 1ddb726539578636ee2d1f82f6d9b691 221 SUPERFAMILY SSF46785 8 103 9.24E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_29600 1ddb726539578636ee2d1f82f6d9b691 221 Gene3D G3DSA:1.20.120.530 75 217 4.6E-26 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AMIS_70790 4b1e7e805f11915cc3629f69ed8a7c64 153 SUPERFAMILY SSF55729 12 143 1.34E-26 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_70790 4b1e7e805f11915cc3629f69ed8a7c64 153 Pfam PF00583 Acetyltransferase (GNAT) family 45 131 2.0E-14 T 14-10-2018 IPR000182 GNAT domain AMIS_70790 4b1e7e805f11915cc3629f69ed8a7c64 153 Gene3D G3DSA:3.40.630.30 2 153 1.2E-34 T 14-10-2018 AMIS_56630 2de9e514fd2941179f5bd52c7fcb0aa9 544 PIRSF PIRSF002741 4 536 3.2E-62 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AMIS_56630 2de9e514fd2941179f5bd52c7fcb0aa9 544 Gene3D G3DSA:3.40.190.10 58 525 3.3E-85 T 14-10-2018 AMIS_56630 2de9e514fd2941179f5bd52c7fcb0aa9 544 SUPERFAMILY SSF53850 48 539 3.26E-87 T 14-10-2018 AMIS_56630 2de9e514fd2941179f5bd52c7fcb0aa9 544 Gene3D G3DSA:3.90.76.10 81 187 3.3E-85 T 14-10-2018 AMIS_56630 2de9e514fd2941179f5bd52c7fcb0aa9 544 Gene3D G3DSA:3.10.105.10 291 514 3.3E-85 T 14-10-2018 AMIS_56630 2de9e514fd2941179f5bd52c7fcb0aa9 544 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 94 423 7.1E-62 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain AMIS_50390 73d74f25b54511f6e7803b9b4eed961c 81 Pfam PF00550 Phosphopantetheine attachment site 11 75 3.0E-7 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain AMIS_50390 73d74f25b54511f6e7803b9b4eed961c 81 SUPERFAMILY SSF47336 2 78 1.24E-11 T 14-10-2018 IPR036736 ACP-like superfamily AMIS_50390 73d74f25b54511f6e7803b9b4eed961c 81 Gene3D G3DSA:1.10.1200.10 1 78 5.8E-14 T 14-10-2018 IPR036736 ACP-like superfamily AMIS_60150 120e4216e465f56df10d1979e0d2b94b 391 SMART SM00458 33 154 7.8E-25 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_60150 120e4216e465f56df10d1979e0d2b94b 391 Gene3D G3DSA:2.80.10.50 29 116 1.1E-26 T 14-10-2018 AMIS_60150 120e4216e465f56df10d1979e0d2b94b 391 Pfam PF00652 Ricin-type beta-trefoil lectin domain 34 151 1.6E-27 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_60150 120e4216e465f56df10d1979e0d2b94b 391 SUPERFAMILY SSF50370 38 153 3.92E-37 T 14-10-2018 IPR035992 Ricin B-like lectins AMIS_60150 120e4216e465f56df10d1979e0d2b94b 391 Gene3D G3DSA:2.80.10.50 117 154 6.0E-14 T 14-10-2018 AMIS_60150 120e4216e465f56df10d1979e0d2b94b 391 SUPERFAMILY SSF53955 161 390 4.5E-84 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily AMIS_60150 120e4216e465f56df10d1979e0d2b94b 391 Gene3D G3DSA:1.20.141.10 169 388 1.1E-93 T 14-10-2018 AMIS_60150 120e4216e465f56df10d1979e0d2b94b 391 Pfam PF01374 Glycosyl hydrolase family 46 174 379 1.9E-94 T 14-10-2018 IPR000400 Glycoside hydrolase, family 46 GO:0005576|GO:0005975|GO:0016977 KEGG: 00520+3.2.1.132 AMIS_60150 120e4216e465f56df10d1979e0d2b94b 391 Gene3D G3DSA:3.30.386.10 185 279 1.1E-93 T 14-10-2018 IPR023099 Glycoside hydrolase, family 46, N-terminal GO:0005975|GO:0016977 KEGG: 00520+3.2.1.132 AMIS_9430 8e91c83051c2a143e52ca00c2ca490d9 322 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 292 3.3E-62 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AMIS_9430 8e91c83051c2a143e52ca00c2ca490d9 322 SUPERFAMILY SSF53686 4 303 2.75E-81 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMIS_9430 8e91c83051c2a143e52ca00c2ca490d9 322 Gene3D G3DSA:3.40.50.1100 46 165 3.8E-98 T 14-10-2018 AMIS_9430 8e91c83051c2a143e52ca00c2ca490d9 322 Gene3D G3DSA:3.40.50.1100 9 301 3.8E-98 T 14-10-2018 AMIS_9430 8e91c83051c2a143e52ca00c2ca490d9 322 TIGRFAM TIGR01136 cysKM: cysteine synthase 10 305 8.2E-106 T 14-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 AMIS_9430 8e91c83051c2a143e52ca00c2ca490d9 322 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 41 54 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 AMIS_9430 8e91c83051c2a143e52ca00c2ca490d9 322 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 39 57 - T 14-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 AMIS_67170 406c6da8e78695ecd2fa4c3ab99e67e5 64 SUPERFAMILY SSF47598 7 48 7.78E-5 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 AMIS_61400 f001856d2abf34f2f00d4565e83ba01a 230 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 56 1.7E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_61400 f001856d2abf34f2f00d4565e83ba01a 230 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 26 40 1.7E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_61400 f001856d2abf34f2f00d4565e83ba01a 230 Pfam PF07729 FCD domain 76 197 9.4E-27 T 14-10-2018 IPR011711 GntR, C-terminal AMIS_61400 f001856d2abf34f2f00d4565e83ba01a 230 Gene3D G3DSA:1.20.120.530 69 206 4.3E-30 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AMIS_61400 f001856d2abf34f2f00d4565e83ba01a 230 SUPERFAMILY SSF46785 3 93 2.18E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_61400 f001856d2abf34f2f00d4565e83ba01a 230 SUPERFAMILY SSF48008 72 202 3.66E-28 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AMIS_61400 f001856d2abf34f2f00d4565e83ba01a 230 SMART SM00345 8 66 8.8E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_61400 f001856d2abf34f2f00d4565e83ba01a 230 Gene3D G3DSA:1.10.10.10 1 67 1.4E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_61400 f001856d2abf34f2f00d4565e83ba01a 230 SMART SM00895 76 198 1.8E-19 T 14-10-2018 IPR011711 GntR, C-terminal AMIS_61400 f001856d2abf34f2f00d4565e83ba01a 230 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 66 2.4E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_26770 bbd7d3af06e1290cb6f621dfae2a5a9b 206 Gene3D G3DSA:1.10.10.60 3 52 5.5E-22 T 14-10-2018 AMIS_26770 bbd7d3af06e1290cb6f621dfae2a5a9b 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 57 9.2E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_26770 bbd7d3af06e1290cb6f621dfae2a5a9b 206 SUPERFAMILY SSF46689 2 66 1.44E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_26770 bbd7d3af06e1290cb6f621dfae2a5a9b 206 Gene3D G3DSA:1.10.357.10 54 200 8.7E-27 T 14-10-2018 AMIS_74710 6c6a00b4d89bfcad4ddc6b99a0cb0984 277 SUPERFAMILY SSF53720 15 245 6.54E-35 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMIS_74710 6c6a00b4d89bfcad4ddc6b99a0cb0984 277 Pfam PF00171 Aldehyde dehydrogenase family 42 245 3.8E-28 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AMIS_74710 6c6a00b4d89bfcad4ddc6b99a0cb0984 277 Gene3D G3DSA:3.40.605.10 16 275 2.1E-40 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AMIS_39710 32095a0e50c322549e9d271ecb3066db 231 Pfam PF00440 Bacterial regulatory proteins, tetR family 28 74 6.4E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_39710 32095a0e50c322549e9d271ecb3066db 231 Gene3D G3DSA:1.10.10.60 8 84 1.0E-16 T 14-10-2018 AMIS_39710 32095a0e50c322549e9d271ecb3066db 231 Gene3D G3DSA:1.10.357.10 86 231 5.3E-35 T 14-10-2018 AMIS_39710 32095a0e50c322549e9d271ecb3066db 231 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 90 229 1.8E-10 T 14-10-2018 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 AMIS_39710 32095a0e50c322549e9d271ecb3066db 231 SUPERFAMILY SSF46689 23 82 3.73E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_39710 32095a0e50c322549e9d271ecb3066db 231 SUPERFAMILY SSF48498 90 230 8.56E-28 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_30730 f903de9ac291fad39e8d80fd928377ee 894 Gene3D G3DSA:1.10.10.10 827 894 5.4E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_30730 f903de9ac291fad39e8d80fd928377ee 894 Pfam PF00196 Bacterial regulatory proteins, luxR family 833 887 4.1E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_30730 f903de9ac291fad39e8d80fd928377ee 894 SMART SM00421 831 888 6.1E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_30730 f903de9ac291fad39e8d80fd928377ee 894 SUPERFAMILY SSF46894 827 894 5.44E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_30730 f903de9ac291fad39e8d80fd928377ee 894 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 848 864 4.0E-5 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_30730 f903de9ac291fad39e8d80fd928377ee 894 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 864 876 4.0E-5 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_30730 f903de9ac291fad39e8d80fd928377ee 894 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 834 848 4.0E-5 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_30730 f903de9ac291fad39e8d80fd928377ee 894 Gene3D G3DSA:1.25.40.10 493 812 2.3E-29 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_30730 f903de9ac291fad39e8d80fd928377ee 894 SUPERFAMILY SSF52540 64 239 3.12E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_80250 107106340735845306bc051a58345ee3 230 Gene3D G3DSA:1.10.10.10 137 230 1.0E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_80250 107106340735845306bc051a58345ee3 230 SUPERFAMILY SSF46894 132 228 8.5E-27 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_80250 107106340735845306bc051a58345ee3 230 Pfam PF00072 Response regulator receiver domain 11 119 4.3E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_80250 107106340735845306bc051a58345ee3 230 SMART SM00448 9 119 1.1E-41 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_80250 107106340735845306bc051a58345ee3 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 226 2.2E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_80250 107106340735845306bc051a58345ee3 230 Gene3D G3DSA:3.40.50.2300 1 136 2.9E-38 T 14-10-2018 AMIS_80250 107106340735845306bc051a58345ee3 230 SMART SM00862 155 226 8.4E-25 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_80250 107106340735845306bc051a58345ee3 230 SUPERFAMILY SSF52172 6 133 1.71E-41 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_32110 23db4ae302421439486cd3d390ff0e02 405 SUPERFAMILY SSF51338 3 68 8.16E-13 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMIS_32110 23db4ae302421439486cd3d390ff0e02 405 SUPERFAMILY SSF51556 59 355 5.38E-63 T 14-10-2018 IPR032466 Metal-dependent hydrolase AMIS_32110 23db4ae302421439486cd3d390ff0e02 405 Pfam PF01979 Amidohydrolase family 55 390 2.8E-34 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AMIS_32110 23db4ae302421439486cd3d390ff0e02 405 Gene3D G3DSA:3.20.20.140 61 354 2.6E-97 T 14-10-2018 AMIS_32110 23db4ae302421439486cd3d390ff0e02 405 SUPERFAMILY SSF51338 337 391 5.61E-12 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMIS_32110 23db4ae302421439486cd3d390ff0e02 405 Gene3D G3DSA:2.30.40.10 7 391 2.6E-97 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMIS_67560 d870afa8a0977fb47b860786afe0652c 319 Gene3D G3DSA:1.10.3720.10 80 317 5.1E-48 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_67560 d870afa8a0977fb47b860786afe0652c 319 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 309 4.8E-9 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_67560 d870afa8a0977fb47b860786afe0652c 319 SUPERFAMILY SSF161098 84 304 2.29E-44 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_3670 03630a5207153c2558112b913990fd7c 553 Pfam PF13625 Helicase conserved C-terminal domain 6 134 1.5E-41 T 14-10-2018 IPR032830 Helicase XPB/Ssl2, N-terminal domain Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167246|Reactome: R-HSA-427413|Reactome: R-HSA-5696395|Reactome: R-HSA-5696400|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73863|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-77075 AMIS_3670 03630a5207153c2558112b913990fd7c 553 Gene3D G3DSA:3.40.50.300 171 353 2.5E-36 T 14-10-2018 AMIS_3670 03630a5207153c2558112b913990fd7c 553 SMART SM00487 178 353 1.8E-20 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMIS_3670 03630a5207153c2558112b913990fd7c 553 Gene3D G3DSA:3.40.50.300 354 545 3.3E-48 T 14-10-2018 AMIS_3670 03630a5207153c2558112b913990fd7c 553 Pfam PF16203 ERCC3/RAD25/XPB C-terminal helicase 353 540 2.3E-47 T 14-10-2018 IPR032438 ERCC3/RAD25/XPB helicase, C-terminal domain Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167246|Reactome: R-HSA-427413|Reactome: R-HSA-5696395|Reactome: R-HSA-5696400|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73863|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-77075 AMIS_3670 03630a5207153c2558112b913990fd7c 553 Pfam PF04851 Type III restriction enzyme, res subunit 181 326 5.3E-12 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AMIS_3670 03630a5207153c2558112b913990fd7c 553 SUPERFAMILY SSF52540 146 345 8.8E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_3670 03630a5207153c2558112b913990fd7c 553 SMART SM00490 423 500 1.5E-9 T 14-10-2018 IPR001650 Helicase, C-terminal AMIS_3670 03630a5207153c2558112b913990fd7c 553 SUPERFAMILY SSF52540 286 527 6.2E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_65140 fa7a30c279e1878eaec10d1f885d3ec4 1019 Pfam PF03704 Bacterial transcriptional activator domain 105 246 1.2E-37 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain AMIS_65140 fa7a30c279e1878eaec10d1f885d3ec4 1019 Pfam PF00486 Transcriptional regulatory protein, C terminal 24 90 1.7E-7 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_65140 fa7a30c279e1878eaec10d1f885d3ec4 1019 SUPERFAMILY SSF48452 716 864 3.07E-23 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_65140 fa7a30c279e1878eaec10d1f885d3ec4 1019 Gene3D G3DSA:1.25.40.10 103 268 9.7E-46 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_65140 fa7a30c279e1878eaec10d1f885d3ec4 1019 Gene3D G3DSA:1.25.40.10 686 873 6.8E-36 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_65140 fa7a30c279e1878eaec10d1f885d3ec4 1019 SMART SM00862 23 98 5.3E-12 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_65140 fa7a30c279e1878eaec10d1f885d3ec4 1019 Gene3D G3DSA:3.40.50.300 287 450 8.2E-26 T 14-10-2018 AMIS_65140 fa7a30c279e1878eaec10d1f885d3ec4 1019 SUPERFAMILY SSF46894 18 98 1.33E-10 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_65140 fa7a30c279e1878eaec10d1f885d3ec4 1019 Pfam PF00931 NB-ARC domain 327 565 1.2E-5 T 14-10-2018 IPR002182 NB-ARC GO:0043531 Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-6798695|Reactome: R-HSA-6803207|Reactome: R-HSA-8953750 AMIS_65140 fa7a30c279e1878eaec10d1f885d3ec4 1019 Gene3D G3DSA:1.25.40.10 874 1008 2.9E-23 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_65140 fa7a30c279e1878eaec10d1f885d3ec4 1019 Pfam PF13424 Tetratricopeptide repeat 723 769 3.9E-8 T 14-10-2018 AMIS_65140 fa7a30c279e1878eaec10d1f885d3ec4 1019 Pfam PF13424 Tetratricopeptide repeat 780 848 7.1E-10 T 14-10-2018 AMIS_65140 fa7a30c279e1878eaec10d1f885d3ec4 1019 SUPERFAMILY SSF52540 293 563 2.22E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_65140 fa7a30c279e1878eaec10d1f885d3ec4 1019 SUPERFAMILY SSF48452 836 1005 9.19E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_65140 fa7a30c279e1878eaec10d1f885d3ec4 1019 PRINTS PR00364 Disease resistance protein signature 328 343 1.9E-5 T 14-10-2018 AMIS_65140 fa7a30c279e1878eaec10d1f885d3ec4 1019 PRINTS PR00364 Disease resistance protein signature 493 507 1.9E-5 T 14-10-2018 AMIS_65140 fa7a30c279e1878eaec10d1f885d3ec4 1019 PRINTS PR00364 Disease resistance protein signature 406 420 1.9E-5 T 14-10-2018 AMIS_65140 fa7a30c279e1878eaec10d1f885d3ec4 1019 SMART SM01043 105 246 7.6E-46 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain AMIS_65140 fa7a30c279e1878eaec10d1f885d3ec4 1019 Pfam PF13374 Tetratricopeptide repeat 938 971 0.004 T 14-10-2018 AMIS_65140 fa7a30c279e1878eaec10d1f885d3ec4 1019 SUPERFAMILY SSF48452 101 262 5.31E-27 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_65140 fa7a30c279e1878eaec10d1f885d3ec4 1019 SMART SM00028 898 931 260.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_65140 fa7a30c279e1878eaec10d1f885d3ec4 1019 SMART SM00028 778 811 35.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_65140 fa7a30c279e1878eaec10d1f885d3ec4 1019 SMART SM00028 938 971 1.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_65140 fa7a30c279e1878eaec10d1f885d3ec4 1019 SMART SM00028 818 851 83.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_65140 fa7a30c279e1878eaec10d1f885d3ec4 1019 SMART SM00028 738 771 1.9E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_65140 fa7a30c279e1878eaec10d1f885d3ec4 1019 Gene3D G3DSA:1.10.10.10 5 100 3.7E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_35560 c7d064ee35cb1f53e5fd318e5cbaac4a 157 Pfam PF12277 Protein of unknown function (DUF3618) 8 52 5.6E-15 T 14-10-2018 IPR022062 Protein of unknown function DUF3618 AMIS_17080 bc1e4f39f542eb392cd59f4a5d965838 177 SUPERFAMILY SSF88659 94 157 6.17E-15 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_17080 bc1e4f39f542eb392cd59f4a5d965838 177 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 8 156 1.1E-17 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_17080 bc1e4f39f542eb392cd59f4a5d965838 177 SUPERFAMILY SSF88946 5 90 9.02E-10 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_17080 bc1e4f39f542eb392cd59f4a5d965838 177 TIGRFAM TIGR02983 SigE-fam_strep: RNA polymerase sigma-70 factor, sigma-E family 4 158 8.1E-44 T 14-10-2018 IPR014325 RNA polymerase sigma-E factor, actinobacteria GO:0016987 AMIS_17080 bc1e4f39f542eb392cd59f4a5d965838 177 Gene3D G3DSA:1.10.10.10 79 163 5.0E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_17080 bc1e4f39f542eb392cd59f4a5d965838 177 Pfam PF08281 Sigma-70, region 4 101 153 2.1E-14 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_17080 bc1e4f39f542eb392cd59f4a5d965838 177 Gene3D G3DSA:1.10.1740.10 1 78 4.1E-5 T 14-10-2018 AMIS_17080 bc1e4f39f542eb392cd59f4a5d965838 177 Pfam PF04542 Sigma-70 region 2 16 76 2.2E-5 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_56320 44f09e624bbf23d76f661db71206f5e0 268 SUPERFAMILY SSF51735 8 253 7.54E-74 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_56320 44f09e624bbf23d76f661db71206f5e0 268 Gene3D G3DSA:3.40.50.720 8 251 3.1E-74 T 14-10-2018 AMIS_56320 44f09e624bbf23d76f661db71206f5e0 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 5.3E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_56320 44f09e624bbf23d76f661db71206f5e0 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 5.3E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_56320 44f09e624bbf23d76f661db71206f5e0 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 5.3E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_56320 44f09e624bbf23d76f661db71206f5e0 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.1E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_56320 44f09e624bbf23d76f661db71206f5e0 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.1E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_56320 44f09e624bbf23d76f661db71206f5e0 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 1.1E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_56320 44f09e624bbf23d76f661db71206f5e0 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 1.1E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_56320 44f09e624bbf23d76f661db71206f5e0 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 1.1E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_56320 44f09e624bbf23d76f661db71206f5e0 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 1.1E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_56320 44f09e624bbf23d76f661db71206f5e0 268 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMIS_56320 44f09e624bbf23d76f661db71206f5e0 268 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 249 2.1E-53 T 14-10-2018 AMIS_30470 5a033df3b28408577d1bbc8ad56424d1 883 Gene3D G3DSA:3.20.20.450 631 877 4.9E-86 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_30470 5a033df3b28408577d1bbc8ad56424d1 883 SMART SM00091 334 400 2.6E-13 T 14-10-2018 IPR000014 PAS domain AMIS_30470 5a033df3b28408577d1bbc8ad56424d1 883 Pfam PF00990 Diguanylate cyclase, GGDEF domain 459 611 6.2E-39 T 14-10-2018 IPR000160 GGDEF domain AMIS_30470 5a033df3b28408577d1bbc8ad56424d1 883 Gene3D G3DSA:3.30.450.20 331 457 2.4E-24 T 14-10-2018 AMIS_30470 5a033df3b28408577d1bbc8ad56424d1 883 SMART SM00267 448 617 3.6E-50 T 14-10-2018 IPR000160 GGDEF domain AMIS_30470 5a033df3b28408577d1bbc8ad56424d1 883 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 332 454 3.1E-21 T 14-10-2018 IPR000014 PAS domain AMIS_30470 5a033df3b28408577d1bbc8ad56424d1 883 SMART SM00052 627 864 1.2E-95 T 14-10-2018 IPR001633 EAL domain AMIS_30470 5a033df3b28408577d1bbc8ad56424d1 883 SUPERFAMILY SSF55785 332 446 1.8E-24 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_30470 5a033df3b28408577d1bbc8ad56424d1 883 Pfam PF00989 PAS fold 335 445 4.1E-15 T 14-10-2018 IPR013767 PAS fold GO:0006355 AMIS_30470 5a033df3b28408577d1bbc8ad56424d1 883 SUPERFAMILY SSF55073 464 618 8.63E-39 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_30470 5a033df3b28408577d1bbc8ad56424d1 883 Pfam PF00563 EAL domain 634 859 6.9E-67 T 14-10-2018 IPR001633 EAL domain AMIS_30470 5a033df3b28408577d1bbc8ad56424d1 883 SUPERFAMILY SSF141868 633 871 1.7E-78 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_30470 5a033df3b28408577d1bbc8ad56424d1 883 Gene3D G3DSA:3.30.70.270 458 630 1.9E-47 T 14-10-2018 AMIS_30470 5a033df3b28408577d1bbc8ad56424d1 883 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 457 614 4.1E-32 T 14-10-2018 IPR000160 GGDEF domain AMIS_30430 a6d137921c0120ad747b0c1d60ef6fd8 223 SUPERFAMILY SSF46894 141 219 9.18E-22 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_30430 a6d137921c0120ad747b0c1d60ef6fd8 223 SMART SM00448 3 118 3.7E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_30430 a6d137921c0120ad747b0c1d60ef6fd8 223 Pfam PF00072 Response regulator receiver domain 5 118 5.9E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_30430 a6d137921c0120ad747b0c1d60ef6fd8 223 SUPERFAMILY SSF52172 3 130 1.22E-33 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_30430 a6d137921c0120ad747b0c1d60ef6fd8 223 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 188 1.5E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_30430 a6d137921c0120ad747b0c1d60ef6fd8 223 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 158 172 1.5E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_30430 a6d137921c0120ad747b0c1d60ef6fd8 223 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 188 200 1.5E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_30430 a6d137921c0120ad747b0c1d60ef6fd8 223 Gene3D G3DSA:3.40.50.12740 3 218 8.0E-66 T 14-10-2018 AMIS_30430 a6d137921c0120ad747b0c1d60ef6fd8 223 SMART SM00421 155 212 6.4E-25 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_30430 a6d137921c0120ad747b0c1d60ef6fd8 223 Pfam PF00196 Bacterial regulatory proteins, luxR family 158 212 4.3E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_45070 d38b0690f27aad2a0d4b8c5e72ed2b21 241 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 183 197 - T 14-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 AMIS_45070 d38b0690f27aad2a0d4b8c5e72ed2b21 241 Pfam PF08241 Methyltransferase domain 86 193 4.3E-21 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 AMIS_45070 d38b0690f27aad2a0d4b8c5e72ed2b21 241 SUPERFAMILY SSF53335 68 240 2.61E-35 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_45070 d38b0690f27aad2a0d4b8c5e72ed2b21 241 Gene3D G3DSA:3.40.50.150 62 240 1.4E-36 T 14-10-2018 AMIS_24650 f9beca46ba22c18b875ea23274c3dfec 235 Gene3D G3DSA:3.40.50.1000 10 214 1.1E-50 T 14-10-2018 IPR023214 HAD superfamily AMIS_24650 f9beca46ba22c18b875ea23274c3dfec 235 Gene3D G3DSA:1.10.150.240 23 89 1.1E-50 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AMIS_24650 f9beca46ba22c18b875ea23274c3dfec 235 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 190 9.5E-20 T 14-10-2018 AMIS_24650 f9beca46ba22c18b875ea23274c3dfec 235 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 128 192 1.0E-10 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMIS_24650 f9beca46ba22c18b875ea23274c3dfec 235 SUPERFAMILY SSF56784 8 226 3.01E-48 T 14-10-2018 IPR036412 HAD-like superfamily AMIS_48130 2903e8949f10a92e8bb2aafdf9cdf8ba 429 Gene3D G3DSA:2.10.70.100 110 148 8.4E-7 T 14-10-2018 AMIS_48130 2903e8949f10a92e8bb2aafdf9cdf8ba 429 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 222 407 2.2E-45 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_48130 2903e8949f10a92e8bb2aafdf9cdf8ba 429 SUPERFAMILY SSF81606 210 406 1.23E-9 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_48130 2903e8949f10a92e8bb2aafdf9cdf8ba 429 Gene3D G3DSA:3.30.450.20 28 99 1.4E-12 T 14-10-2018 AMIS_48130 2903e8949f10a92e8bb2aafdf9cdf8ba 429 SMART SM00331 195 408 4.1E-28 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_48130 2903e8949f10a92e8bb2aafdf9cdf8ba 429 Gene3D G3DSA:3.60.40.10 156 408 1.2E-57 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_48130 2903e8949f10a92e8bb2aafdf9cdf8ba 429 SUPERFAMILY SSF55785 47 145 7.23E-8 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_3960 1a483ce49dc2bc39333e0a1dc619239a 67 Pfam PF04024 PspC domain 10 66 4.4E-17 T 14-10-2018 IPR007168 Phage shock protein, PspC, N-terminal AMIS_70800 2cafc4a07fcc4b7ae28bd735a210633a 312 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 6 311 26.599 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 AMIS_70800 2cafc4a07fcc4b7ae28bd735a210633a 312 Gene3D G3DSA:3.30.1330.10 1 142 7.9E-43 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AMIS_70800 2cafc4a07fcc4b7ae28bd735a210633a 312 Pfam PF02769 AIR synthase related protein, C-terminal domain 154 245 4.3E-5 T 14-10-2018 IPR010918 PurM-like, C-terminal domain AMIS_70800 2cafc4a07fcc4b7ae28bd735a210633a 312 SUPERFAMILY SSF55326 3 140 1.23E-34 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AMIS_70800 2cafc4a07fcc4b7ae28bd735a210633a 312 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 7 311 2.6E-80 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 AMIS_70800 2cafc4a07fcc4b7ae28bd735a210633a 312 Pfam PF00586 AIR synthase related protein, N-terminal domain 31 140 1.3E-21 T 14-10-2018 IPR016188 PurM-like, N-terminal domain AMIS_70800 2cafc4a07fcc4b7ae28bd735a210633a 312 PIRSF PIRSF005303 1 311 1.7E-87 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 AMIS_70800 2cafc4a07fcc4b7ae28bd735a210633a 312 SUPERFAMILY SSF56042 146 303 1.5E-32 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AMIS_70800 2cafc4a07fcc4b7ae28bd735a210633a 312 Gene3D G3DSA:3.90.650.10 149 311 9.3E-48 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AMIS_29910 353cb3096b192315de8d3c73b7a433bb 382 Gene3D G3DSA:3.30.420.40 203 364 4.3E-74 T 14-10-2018 AMIS_29910 353cb3096b192315de8d3c73b7a433bb 382 SUPERFAMILY SSF53067 83 376 3.57E-46 T 14-10-2018 AMIS_29910 353cb3096b192315de8d3c73b7a433bb 382 Pfam PF00480 ROK family 84 360 4.9E-47 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AMIS_29910 353cb3096b192315de8d3c73b7a433bb 382 SUPERFAMILY SSF46785 14 66 8.33E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_29910 353cb3096b192315de8d3c73b7a433bb 382 Pfam PF13412 Winged helix-turn-helix DNA-binding 22 55 7.1E-5 T 14-10-2018 AMIS_29910 353cb3096b192315de8d3c73b7a433bb 382 ProSitePatterns PS01125 ROK family signature. 213 240 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AMIS_29910 353cb3096b192315de8d3c73b7a433bb 382 Gene3D G3DSA:3.30.420.40 90 366 4.3E-74 T 14-10-2018 AMIS_29910 353cb3096b192315de8d3c73b7a433bb 382 Gene3D G3DSA:1.10.10.10 14 76 7.1E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_33150 624f884c9b6bc4db456117e7bb8bf0d9 313 Gene3D G3DSA:1.10.1740.10 3 76 7.4E-12 T 14-10-2018 AMIS_33150 624f884c9b6bc4db456117e7bb8bf0d9 313 Pfam PF08281 Sigma-70, region 4 108 160 6.9E-13 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_33150 624f884c9b6bc4db456117e7bb8bf0d9 313 Gene3D G3DSA:3.10.450.50 167 303 2.5E-6 T 14-10-2018 AMIS_33150 624f884c9b6bc4db456117e7bb8bf0d9 313 Pfam PF04542 Sigma-70 region 2 9 72 3.2E-17 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_33150 624f884c9b6bc4db456117e7bb8bf0d9 313 Gene3D G3DSA:1.10.10.10 89 166 1.8E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_33150 624f884c9b6bc4db456117e7bb8bf0d9 313 SUPERFAMILY SSF88946 9 89 5.49E-15 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_33150 624f884c9b6bc4db456117e7bb8bf0d9 313 SUPERFAMILY SSF88659 80 162 3.05E-11 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_33150 624f884c9b6bc4db456117e7bb8bf0d9 313 SUPERFAMILY SSF54427 172 300 6.97E-11 T 14-10-2018 IPR032710 NTF2-like domain superfamily AMIS_33150 624f884c9b6bc4db456117e7bb8bf0d9 313 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 11 160 8.3E-15 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_15490 1edc5e2379326a97949128ec74bb2e94 294 SUPERFAMILY SSF103481 199 280 1.83E-8 T 14-10-2018 AMIS_15490 1edc5e2379326a97949128ec74bb2e94 294 SUPERFAMILY SSF103481 43 132 8.76E-12 T 14-10-2018 AMIS_15490 1edc5e2379326a97949128ec74bb2e94 294 Pfam PF00892 EamA-like transporter family 7 131 4.6E-17 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMIS_15490 1edc5e2379326a97949128ec74bb2e94 294 Pfam PF00892 EamA-like transporter family 140 276 8.3E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMIS_57500 03f70a3cae7bbe1b2d2d3b0bd5571664 397 Gene3D G3DSA:3.30.1540.10 232 324 1.1E-141 T 14-10-2018 AMIS_57500 03f70a3cae7bbe1b2d2d3b0bd5571664 397 SUPERFAMILY SSF89796 3 397 1.96E-138 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily AMIS_57500 03f70a3cae7bbe1b2d2d3b0bd5571664 397 Gene3D G3DSA:3.40.50.10540 4 391 1.1E-141 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily AMIS_57500 03f70a3cae7bbe1b2d2d3b0bd5571664 397 Pfam PF02515 CoA-transferase family III 5 373 9.2E-135 T 14-10-2018 IPR003673 CoA-transferase family III GO:0003824 AMIS_33360 32fff1910a7f70fa2abb39054a017daa 499 Gene3D G3DSA:3.40.640.10 7 284 6.1E-76 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_33360 32fff1910a7f70fa2abb39054a017daa 499 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 407 463 1.1E-13 T 14-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 AMIS_33360 32fff1910a7f70fa2abb39054a017daa 499 Gene3D G3DSA:3.90.100.10 397 487 4.1E-20 T 14-10-2018 AMIS_33360 32fff1910a7f70fa2abb39054a017daa 499 SUPERFAMILY SSF53383 8 382 2.18E-74 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_33360 32fff1910a7f70fa2abb39054a017daa 499 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 8 369 1.6E-48 T 14-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 AMIS_33360 32fff1910a7f70fa2abb39054a017daa 499 SUPERFAMILY SSF55904 341 486 1.44E-33 T 14-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 AMIS_51360 10df4dc6df3ad6181613b67a4ba39651 216 SMART SM00448 1 110 6.1E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_51360 10df4dc6df3ad6181613b67a4ba39651 216 Pfam PF00072 Response regulator receiver domain 1 110 2.5E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_51360 10df4dc6df3ad6181613b67a4ba39651 216 Gene3D G3DSA:3.40.50.2300 1 119 1.9E-31 T 14-10-2018 AMIS_51360 10df4dc6df3ad6181613b67a4ba39651 216 Gene3D G3DSA:1.10.10.10 121 216 6.5E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_51360 10df4dc6df3ad6181613b67a4ba39651 216 Pfam PF00486 Transcriptional regulatory protein, C terminal 144 214 1.7E-17 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_51360 10df4dc6df3ad6181613b67a4ba39651 216 SUPERFAMILY SSF52172 1 171 2.99E-33 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_51360 10df4dc6df3ad6181613b67a4ba39651 216 SMART SM00862 143 215 1.2E-17 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_76000 1b17632fed46588164e19756cf165f9d 217 Gene3D G3DSA:1.20.58.220 1 215 8.0E-59 T 14-10-2018 IPR038078 PhoU-like domain superfamily AMIS_76000 1b17632fed46588164e19756cf165f9d 217 Pfam PF01895 PhoU domain 17 102 1.4E-19 T 14-10-2018 IPR026022 PhoU domain AMIS_76000 1b17632fed46588164e19756cf165f9d 217 Pfam PF01895 PhoU domain 122 203 2.5E-10 T 14-10-2018 IPR026022 PhoU domain AMIS_76000 1b17632fed46588164e19756cf165f9d 217 PIRSF PIRSF003107 1 217 8.6E-50 T 14-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 AMIS_76000 1b17632fed46588164e19756cf165f9d 217 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 4 212 3.9E-52 T 14-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 AMIS_76000 1b17632fed46588164e19756cf165f9d 217 SUPERFAMILY SSF109755 3 213 1.26E-55 T 14-10-2018 AMIS_9550 60974e37076abca28ff15f3d85cff9dd 274 SUPERFAMILY SSF46689 13 74 4.66E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_9550 60974e37076abca28ff15f3d85cff9dd 274 Pfam PF01418 Helix-turn-helix domain, rpiR family 12 72 7.3E-14 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AMIS_9550 60974e37076abca28ff15f3d85cff9dd 274 Gene3D G3DSA:3.40.50.10490 83 270 2.8E-23 T 14-10-2018 AMIS_9550 60974e37076abca28ff15f3d85cff9dd 274 Gene3D G3DSA:1.10.10.10 8 78 2.5E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_9550 60974e37076abca28ff15f3d85cff9dd 274 SUPERFAMILY SSF53697 87 247 2.07E-14 T 14-10-2018 AMIS_9550 60974e37076abca28ff15f3d85cff9dd 274 Pfam PF01380 SIS domain 175 244 1.2E-7 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AMIS_74260 4440e5656acfd3700563b4901bfa9e70 412 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 21 408 5.6E-121 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 AMIS_74260 4440e5656acfd3700563b4901bfa9e70 412 Pfam PF13742 OB-fold nucleic acid binding domain 21 113 3.0E-14 T 14-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 AMIS_74260 4440e5656acfd3700563b4901bfa9e70 412 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 9 409 24.004 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 AMIS_74260 4440e5656acfd3700563b4901bfa9e70 412 Pfam PF02601 Exonuclease VII, large subunit 344 406 4.8E-11 T 14-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 AMIS_74260 4440e5656acfd3700563b4901bfa9e70 412 Pfam PF02601 Exonuclease VII, large subunit 137 354 9.4E-65 T 14-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 AMIS_32610 f3bdd6ba5a83f23f44fadab8f51d1d75 337 Gene3D G3DSA:3.30.200.20 8 107 6.2E-19 T 14-10-2018 AMIS_32610 f3bdd6ba5a83f23f44fadab8f51d1d75 337 Gene3D G3DSA:3.90.1200.10 109 337 2.5E-65 T 14-10-2018 AMIS_32610 f3bdd6ba5a83f23f44fadab8f51d1d75 337 Pfam PF01636 Phosphotransferase enzyme family 30 252 1.2E-42 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase AMIS_32610 f3bdd6ba5a83f23f44fadab8f51d1d75 337 SUPERFAMILY SSF56112 26 298 4.67E-50 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMIS_7160 800129af93a5e55e77128e8102b9919e 392 Pfam PF00549 CoA-ligase 256 368 1.2E-12 T 14-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AMIS_7160 800129af93a5e55e77128e8102b9919e 392 SUPERFAMILY SSF52210 231 387 1.1E-39 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AMIS_7160 800129af93a5e55e77128e8102b9919e 392 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 2 388 1.9E-121 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AMIS_7160 800129af93a5e55e77128e8102b9919e 392 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 249 273 - T 14-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AMIS_7160 800129af93a5e55e77128e8102b9919e 392 Gene3D G3DSA:3.30.470.20 2 226 5.8E-78 T 14-10-2018 AMIS_7160 800129af93a5e55e77128e8102b9919e 392 Gene3D G3DSA:3.40.50.261 232 390 3.1E-44 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AMIS_7160 800129af93a5e55e77128e8102b9919e 392 Pfam PF08442 ATP-grasp domain 2 194 1.3E-67 T 14-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AMIS_7160 800129af93a5e55e77128e8102b9919e 392 PIRSF PIRSF001554 1 391 2.9E-132 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AMIS_7160 800129af93a5e55e77128e8102b9919e 392 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 389 37.322 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AMIS_7160 800129af93a5e55e77128e8102b9919e 392 Gene3D G3DSA:3.30.1490.20 21 96 5.8E-78 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AMIS_7160 800129af93a5e55e77128e8102b9919e 392 SUPERFAMILY SSF56059 3 227 9.72E-65 T 14-10-2018 AMIS_41330 cdf1b101397d9b6ccbd49354bbd1bdb1 164 SUPERFAMILY SSF46785 6 93 5.13E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_41330 cdf1b101397d9b6ccbd49354bbd1bdb1 164 Gene3D G3DSA:1.10.10.10 2 100 1.3E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_41330 cdf1b101397d9b6ccbd49354bbd1bdb1 164 Pfam PF03551 Transcriptional regulator PadR-like family 8 81 3.9E-18 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal AMIS_2610 b88030d73c926aefd204bec0be52d6aa 117 SUPERFAMILY SSF47413 44 102 1.45E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_2610 b88030d73c926aefd204bec0be52d6aa 117 Gene3D G3DSA:1.10.260.40 37 114 4.5E-15 T 14-10-2018 AMIS_2610 b88030d73c926aefd204bec0be52d6aa 117 Pfam PF01381 Helix-turn-helix 50 102 2.6E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMIS_2610 b88030d73c926aefd204bec0be52d6aa 117 SMART SM00530 49 104 4.0E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMIS_26290 6a029d668f62d524164d7fff9a8d0977 762 Pfam PF00089 Trypsin 36 212 1.5E-15 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 AMIS_26290 6a029d668f62d524164d7fff9a8d0977 762 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 53 68 1.8E-5 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AMIS_26290 6a029d668f62d524164d7fff9a8d0977 762 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 176 188 1.8E-5 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AMIS_26290 6a029d668f62d524164d7fff9a8d0977 762 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 104 118 1.8E-5 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AMIS_26290 6a029d668f62d524164d7fff9a8d0977 762 SUPERFAMILY SSF50494 24 238 1.44E-28 T 14-10-2018 IPR009003 Peptidase S1, PA clan AMIS_26290 6a029d668f62d524164d7fff9a8d0977 762 SMART SM00020 26 296 1.3E-5 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 AMIS_26290 6a029d668f62d524164d7fff9a8d0977 762 Gene3D G3DSA:2.40.10.10 52 241 1.0E-16 T 14-10-2018 AMIS_40 17f7cbbb36a6ae483099eea8d3d3b229 376 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 351 3.4E-20 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal AMIS_40 17f7cbbb36a6ae483099eea8d3d3b229 376 Gene3D G3DSA:1.20.1050.90 120 317 4.5E-94 T 14-10-2018 AMIS_40 17f7cbbb36a6ae483099eea8d3d3b229 376 SUPERFAMILY SSF52540 1 345 6.5E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_40 17f7cbbb36a6ae483099eea8d3d3b229 376 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 365 7.9E-117 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 AMIS_40 17f7cbbb36a6ae483099eea8d3d3b229 376 ProSitePatterns PS00617 RecF protein signature 1. 117 137 - T 14-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 AMIS_40 17f7cbbb36a6ae483099eea8d3d3b229 376 Gene3D G3DSA:3.40.50.300 7 350 4.5E-94 T 14-10-2018 AMIS_40 17f7cbbb36a6ae483099eea8d3d3b229 376 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 376 91.678 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 AMIS_40 17f7cbbb36a6ae483099eea8d3d3b229 376 ProSitePatterns PS00618 RecF protein signature 2. 318 336 - T 14-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 AMIS_5070 95fab7276ecdcf87087135ff0e9c2d59 235 Gene3D G3DSA:3.40.1410.10 74 229 3.5E-38 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AMIS_5070 95fab7276ecdcf87087135ff0e9c2d59 235 SUPERFAMILY SSF64288 56 230 3.61E-42 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AMIS_5070 95fab7276ecdcf87087135ff0e9c2d59 235 Pfam PF07702 UTRA domain 90 225 1.0E-32 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AMIS_5070 95fab7276ecdcf87087135ff0e9c2d59 235 SMART SM00345 11 68 2.3E-19 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_5070 95fab7276ecdcf87087135ff0e9c2d59 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 1.5E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_5070 95fab7276ecdcf87087135ff0e9c2d59 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 1.5E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_5070 95fab7276ecdcf87087135ff0e9c2d59 235 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 68 4.4E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_5070 95fab7276ecdcf87087135ff0e9c2d59 235 SMART SM00866 89 225 2.7E-34 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AMIS_5070 95fab7276ecdcf87087135ff0e9c2d59 235 SUPERFAMILY SSF46785 5 72 5.27E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_5070 95fab7276ecdcf87087135ff0e9c2d59 235 Gene3D G3DSA:1.10.10.10 5 72 9.4E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_73560 d81ba79cfc1ef119d575d623d6dba984 273 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 61 2.9E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_73560 d81ba79cfc1ef119d575d623d6dba984 273 SUPERFAMILY SSF46785 4 104 2.3E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_73560 d81ba79cfc1ef119d575d623d6dba984 273 Gene3D G3DSA:1.10.10.10 1 81 2.5E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_73560 d81ba79cfc1ef119d575d623d6dba984 273 SUPERFAMILY SSF53850 84 268 2.53E-18 T 14-10-2018 AMIS_73560 d81ba79cfc1ef119d575d623d6dba984 273 Pfam PF03466 LysR substrate binding domain 83 237 3.1E-11 T 14-10-2018 IPR005119 LysR, substrate-binding AMIS_73560 d81ba79cfc1ef119d575d623d6dba984 273 Gene3D G3DSA:3.40.190.290 82 272 3.0E-67 T 14-10-2018 AMIS_73560 d81ba79cfc1ef119d575d623d6dba984 273 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 2 270 8.6E-97 T 14-10-2018 IPR017685 HTH-type transcriptional regulator ArgP AMIS_53330 efa1a31c42f66726dd1a26569fb4e351 747 SUPERFAMILY SSF48452 559 734 1.94E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_53330 efa1a31c42f66726dd1a26569fb4e351 747 Pfam PF13560 Helix-turn-helix domain 4 64 1.3E-12 T 14-10-2018 AMIS_53330 efa1a31c42f66726dd1a26569fb4e351 747 Gene3D G3DSA:1.25.40.10 653 746 6.8E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_53330 efa1a31c42f66726dd1a26569fb4e351 747 Gene3D G3DSA:1.10.260.40 2 65 1.4E-13 T 14-10-2018 AMIS_53330 efa1a31c42f66726dd1a26569fb4e351 747 Pfam PF00931 NB-ARC domain 123 228 3.5E-6 T 14-10-2018 IPR002182 NB-ARC GO:0043531 Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-6798695|Reactome: R-HSA-6803207|Reactome: R-HSA-8953750 AMIS_53330 efa1a31c42f66726dd1a26569fb4e351 747 Gene3D G3DSA:1.25.40.10 514 649 2.6E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_53330 efa1a31c42f66726dd1a26569fb4e351 747 Gene3D G3DSA:3.40.50.300 83 244 1.5E-25 T 14-10-2018 AMIS_53330 efa1a31c42f66726dd1a26569fb4e351 747 SUPERFAMILY SSF47413 3 66 4.02E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_53330 efa1a31c42f66726dd1a26569fb4e351 747 Pfam PF13424 Tetratricopeptide repeat 665 731 1.3E-8 T 14-10-2018 AMIS_53330 efa1a31c42f66726dd1a26569fb4e351 747 SMART SM00530 7 63 8.9E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMIS_53330 efa1a31c42f66726dd1a26569fb4e351 747 SUPERFAMILY SSF52540 82 349 3.97E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_53330 efa1a31c42f66726dd1a26569fb4e351 747 PRINTS PR00364 Disease resistance protein signature 124 139 3.8E-9 T 14-10-2018 AMIS_53330 efa1a31c42f66726dd1a26569fb4e351 747 PRINTS PR00364 Disease resistance protein signature 201 215 3.8E-9 T 14-10-2018 AMIS_53330 efa1a31c42f66726dd1a26569fb4e351 747 PRINTS PR00364 Disease resistance protein signature 282 296 3.8E-9 T 14-10-2018 AMIS_62580 3fe45d5f4cf221512da98b7beaefab78 572 SUPERFAMILY SSF51338 414 484 5.47E-12 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMIS_62580 3fe45d5f4cf221512da98b7beaefab78 572 Pfam PF00449 Urease alpha-subunit, N-terminal domain 3 125 5.1E-54 T 14-10-2018 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AMIS_62580 3fe45d5f4cf221512da98b7beaefab78 572 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 432 445 5.4E-31 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AMIS_62580 3fe45d5f4cf221512da98b7beaefab78 572 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 340 356 5.4E-31 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AMIS_62580 3fe45d5f4cf221512da98b7beaefab78 572 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 406 421 5.4E-31 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AMIS_62580 3fe45d5f4cf221512da98b7beaefab78 572 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 301 318 5.4E-31 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AMIS_62580 3fe45d5f4cf221512da98b7beaefab78 572 Pfam PF01979 Amidohydrolase family 131 458 7.9E-66 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AMIS_62580 3fe45d5f4cf221512da98b7beaefab78 572 ProSitePatterns PS00145 Urease active site. 323 339 - T 14-10-2018 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AMIS_62580 3fe45d5f4cf221512da98b7beaefab78 572 SUPERFAMILY SSF51556 135 572 3.81E-180 T 14-10-2018 IPR032466 Metal-dependent hydrolase AMIS_62580 3fe45d5f4cf221512da98b7beaefab78 572 Hamap MF_01953 Urease subunit alpha [ureC]. 2 572 55.049 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AMIS_62580 3fe45d5f4cf221512da98b7beaefab78 572 ProSitePatterns PS01120 Urease nickel ligands signature. 133 146 - T 14-10-2018 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AMIS_62580 3fe45d5f4cf221512da98b7beaefab78 572 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 4 572 5.8E-267 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AMIS_62580 3fe45d5f4cf221512da98b7beaefab78 572 Gene3D G3DSA:2.30.40.10 5 485 1.7E-286 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMIS_62580 3fe45d5f4cf221512da98b7beaefab78 572 Gene3D G3DSA:3.20.20.140 135 572 1.7E-286 T 14-10-2018 AMIS_62580 3fe45d5f4cf221512da98b7beaefab78 572 SUPERFAMILY SSF51338 2 182 1.98E-56 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMIS_41160 d97180eaf7fff5fab61a54f826e67c7f 365 PIRSF PIRSF016660 1 309 1.1E-113 T 14-10-2018 IPR008526 Inner membrane protein YedI AMIS_41160 d97180eaf7fff5fab61a54f826e67c7f 365 Pfam PF05661 Protein of unknown function (DUF808) 3 296 2.5E-124 T 14-10-2018 IPR008526 Inner membrane protein YedI AMIS_30600 6bed5147ec55b55831d1e5d512e82342 408 Gene3D G3DSA:3.50.50.60 7 337 1.1E-85 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_30600 6bed5147ec55b55831d1e5d512e82342 408 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 289 305 9.8E-19 T 14-10-2018 AMIS_30600 6bed5147ec55b55831d1e5d512e82342 408 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 274 289 9.8E-19 T 14-10-2018 AMIS_30600 6bed5147ec55b55831d1e5d512e82342 408 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 148 163 9.8E-19 T 14-10-2018 AMIS_30600 6bed5147ec55b55831d1e5d512e82342 408 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 9.8E-19 T 14-10-2018 AMIS_30600 6bed5147ec55b55831d1e5d512e82342 408 Pfam PF01494 FAD binding domain 3 336 3.0E-26 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 AMIS_30600 6bed5147ec55b55831d1e5d512e82342 408 Gene3D G3DSA:3.30.9.30 37 265 1.1E-85 T 14-10-2018 AMIS_30600 6bed5147ec55b55831d1e5d512e82342 408 SUPERFAMILY SSF51905 4 364 1.55E-55 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_24610 d17084d8e1bfeebec5e95f817ae45058 322 PIRSF PIRSF001365 14 322 2.3E-68 T 14-10-2018 IPR002220 DapA-like GO:0016829 AMIS_24610 d17084d8e1bfeebec5e95f817ae45058 322 Pfam PF00701 Dihydrodipicolinate synthetase family 19 316 5.4E-43 T 14-10-2018 IPR002220 DapA-like GO:0016829 AMIS_24610 d17084d8e1bfeebec5e95f817ae45058 322 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 150 180 - T 14-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 AMIS_24610 d17084d8e1bfeebec5e95f817ae45058 322 SUPERFAMILY SSF51569 18 322 4.5E-69 T 14-10-2018 AMIS_24610 d17084d8e1bfeebec5e95f817ae45058 322 Gene3D G3DSA:3.20.20.70 17 320 3.4E-85 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_24610 d17084d8e1bfeebec5e95f817ae45058 322 SMART SM01130 18 320 1.3E-71 T 14-10-2018 IPR002220 DapA-like GO:0016829 AMIS_57180 5ee80a47998e0a86744660dbe3f8e183 482 SUPERFAMILY SSF53720 6 466 1.57E-104 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMIS_57180 5ee80a47998e0a86744660dbe3f8e183 482 Gene3D G3DSA:3.40.309.10 249 431 3.8E-109 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AMIS_57180 5ee80a47998e0a86744660dbe3f8e183 482 Pfam PF00171 Aldehyde dehydrogenase family 19 464 2.8E-98 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AMIS_57180 5ee80a47998e0a86744660dbe3f8e183 482 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 245 252 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AMIS_57180 5ee80a47998e0a86744660dbe3f8e183 482 Gene3D G3DSA:3.40.605.10 20 461 3.8E-109 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AMIS_13000 e368ab5199d60bb49cf386ee11708334 713 Gene3D G3DSA:3.40.50.300 461 588 9.8E-12 T 14-10-2018 AMIS_13000 e368ab5199d60bb49cf386ee11708334 713 Gene3D G3DSA:3.40.50.300 642 711 4.6E-6 T 14-10-2018 AMIS_13000 e368ab5199d60bb49cf386ee11708334 713 Gene3D G3DSA:3.40.50.300 179 384 2.6E-10 T 14-10-2018 AMIS_13000 e368ab5199d60bb49cf386ee11708334 713 SUPERFAMILY SSF52540 183 708 1.09E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_13000 e368ab5199d60bb49cf386ee11708334 713 Pfam PF13245 AAA domain 194 545 8.4E-16 T 14-10-2018 AMIS_13000 e368ab5199d60bb49cf386ee11708334 713 Pfam PF13538 UvrD-like helicase C-terminal domain 660 706 2.1E-7 T 14-10-2018 IPR027785 UvrD-like helicase C-terminal domain AMIS_42150 1b9a647a2ed698c8f4ebff98b228ebf2 275 SUPERFAMILY SSF52402 4 274 7.26E-79 T 14-10-2018 AMIS_42150 1b9a647a2ed698c8f4ebff98b228ebf2 275 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 19 268 47.338 T 14-10-2018 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 AMIS_42150 1b9a647a2ed698c8f4ebff98b228ebf2 275 Gene3D G3DSA:3.40.50.620 1 275 3.5E-76 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMIS_42150 1b9a647a2ed698c8f4ebff98b228ebf2 275 Pfam PF02540 NAD synthase 24 265 1.2E-66 T 14-10-2018 IPR022310 NAD/GMP synthase AMIS_42150 1b9a647a2ed698c8f4ebff98b228ebf2 275 TIGRFAM TIGR00552 nadE: NAD+ synthetase 23 273 5.6E-71 T 14-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 AMIS_76430 2ddf65443cd1d4599780783a6dab737b 335 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 10 65 2.4E-23 T 14-10-2018 IPR025713 Motility protein B, N-terminal domain AMIS_76430 2ddf65443cd1d4599780783a6dab737b 335 Pfam PF00691 OmpA family 182 279 1.8E-15 T 14-10-2018 IPR006665 OmpA-like domain AMIS_76430 2ddf65443cd1d4599780783a6dab737b 335 Gene3D G3DSA:3.30.1330.60 124 295 3.4E-40 T 14-10-2018 IPR036737 OmpA-like domain superfamily AMIS_76430 2ddf65443cd1d4599780783a6dab737b 335 SUPERFAMILY SSF103088 174 285 3.14E-24 T 14-10-2018 IPR036737 OmpA-like domain superfamily AMIS_28250 ff5b90665c85796e58fd96341aaae316 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 24.562 T 14-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid AMIS_28250 ff5b90665c85796e58fd96341aaae316 101 Gene3D G3DSA:4.10.830.10 40 101 2.0E-21 T 14-10-2018 AMIS_28250 ff5b90665c85796e58fd96341aaae316 101 Pfam PF00253 Ribosomal protein S14p/S29e 48 100 6.2E-23 T 14-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_28250 ff5b90665c85796e58fd96341aaae316 101 SUPERFAMILY SSF57716 2 101 5.35E-30 T 14-10-2018 AMIS_55320 6317e05e5292779e8270449cfac81a97 441 Pfam PF02056 Family 4 glycosyl hydrolase 3 179 9.5E-40 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AMIS_55320 6317e05e5292779e8270449cfac81a97 441 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 190 417 7.8E-38 T 14-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 AMIS_55320 6317e05e5292779e8270449cfac81a97 441 Gene3D G3DSA:3.90.110.10 164 439 3.6E-62 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AMIS_55320 6317e05e5292779e8270449cfac81a97 441 SUPERFAMILY SSF56327 164 433 1.73E-51 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AMIS_55320 6317e05e5292779e8270449cfac81a97 441 SUPERFAMILY SSF51735 1 163 1.32E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_55320 6317e05e5292779e8270449cfac81a97 441 PRINTS PR00732 Glycosyl hydrolase family 4 signature 2 17 1.2E-34 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AMIS_55320 6317e05e5292779e8270449cfac81a97 441 PRINTS PR00732 Glycosyl hydrolase family 4 signature 106 126 1.2E-34 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AMIS_55320 6317e05e5292779e8270449cfac81a97 441 PRINTS PR00732 Glycosyl hydrolase family 4 signature 135 152 1.2E-34 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AMIS_55320 6317e05e5292779e8270449cfac81a97 441 PRINTS PR00732 Glycosyl hydrolase family 4 signature 71 87 1.2E-34 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AMIS_55320 6317e05e5292779e8270449cfac81a97 441 PRINTS PR00732 Glycosyl hydrolase family 4 signature 186 198 1.2E-34 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AMIS_55320 6317e05e5292779e8270449cfac81a97 441 PRINTS PR00732 Glycosyl hydrolase family 4 signature 92 105 1.2E-34 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AMIS_55320 6317e05e5292779e8270449cfac81a97 441 PRINTS PR00732 Glycosyl hydrolase family 4 signature 160 171 1.2E-34 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AMIS_55320 6317e05e5292779e8270449cfac81a97 441 Gene3D G3DSA:3.40.50.720 1 163 1.0E-48 T 14-10-2018 AMIS_30060 9ec646e52699f2803b924bb8dba5602f 134 Gene3D G3DSA:3.30.750.24 1 104 4.3E-19 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_30060 9ec646e52699f2803b924bb8dba5602f 134 Pfam PF13466 STAS domain 15 88 5.3E-11 T 14-10-2018 IPR002645 STAS domain AMIS_30060 9ec646e52699f2803b924bb8dba5602f 134 SUPERFAMILY SSF52091 4 95 1.59E-13 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_10270 7eb1c61ea3fdf4f98833cd55d3c50886 139 Pfam PF03259 Roadblock/LC7 domain 11 101 4.9E-25 T 14-10-2018 IPR004942 Roadblock/LAMTOR2 domain AMIS_10270 7eb1c61ea3fdf4f98833cd55d3c50886 139 Gene3D G3DSA:3.30.450.30 7 132 1.7E-42 T 14-10-2018 AMIS_10270 7eb1c61ea3fdf4f98833cd55d3c50886 139 SUPERFAMILY SSF103196 4 130 1.41E-36 T 14-10-2018 AMIS_10270 7eb1c61ea3fdf4f98833cd55d3c50886 139 SMART SM00960 11 101 8.1E-30 T 14-10-2018 IPR004942 Roadblock/LAMTOR2 domain AMIS_55130 6af9ebb05d13b9cca1a768c97761f98c 454 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 19 146 2.0E-17 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AMIS_55130 6af9ebb05d13b9cca1a768c97761f98c 454 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 158 243 1.3E-18 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 AMIS_55130 6af9ebb05d13b9cca1a768c97761f98c 454 Gene3D G3DSA:3.40.50.720 17 156 9.0E-27 T 14-10-2018 AMIS_55130 6af9ebb05d13b9cca1a768c97761f98c 454 SUPERFAMILY SSF55347 151 339 1.31E-29 T 14-10-2018 AMIS_55130 6af9ebb05d13b9cca1a768c97761f98c 454 SUPERFAMILY SSF51735 15 177 1.03E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_22700 48ea27b98a8e0d5c39fd6eff8bd94e6b 550 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AMIS_22700 48ea27b98a8e0d5c39fd6eff8bd94e6b 550 Pfam PF00270 DEAD/DEAH box helicase 28 191 1.1E-51 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMIS_22700 48ea27b98a8e0d5c39fd6eff8bd94e6b 550 Gene3D G3DSA:3.30.70.330 472 546 3.1E-21 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily AMIS_22700 48ea27b98a8e0d5c39fd6eff8bd94e6b 550 Pfam PF03880 DbpA RNA binding domain 473 543 6.7E-25 T 14-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain AMIS_22700 48ea27b98a8e0d5c39fd6eff8bd94e6b 550 SMART SM00487 23 224 4.1E-62 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMIS_22700 48ea27b98a8e0d5c39fd6eff8bd94e6b 550 Gene3D G3DSA:3.40.50.300 2 210 1.4E-78 T 14-10-2018 AMIS_22700 48ea27b98a8e0d5c39fd6eff8bd94e6b 550 Pfam PF00271 Helicase conserved C-terminal domain 233 341 1.9E-27 T 14-10-2018 IPR001650 Helicase, C-terminal AMIS_22700 48ea27b98a8e0d5c39fd6eff8bd94e6b 550 Gene3D G3DSA:3.40.50.300 226 426 7.2E-49 T 14-10-2018 AMIS_22700 48ea27b98a8e0d5c39fd6eff8bd94e6b 550 SMART SM00490 260 341 2.7E-32 T 14-10-2018 IPR001650 Helicase, C-terminal AMIS_22700 48ea27b98a8e0d5c39fd6eff8bd94e6b 550 SUPERFAMILY SSF52540 75 362 1.67E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_59370 331ab03068fcf1002b95fe02f09c0ef2 248 SUPERFAMILY SSF89392 46 237 5.89E-8 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX AMIS_59600 09f4f93287b0c133bba3673ffb2cbc29 372 Pfam PF01266 FAD dependent oxidoreductase 2 367 1.3E-37 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AMIS_59600 09f4f93287b0c133bba3673ffb2cbc29 372 SUPERFAMILY SSF51905 1 370 6.09E-32 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_59600 09f4f93287b0c133bba3673ffb2cbc29 372 TIGRFAM TIGR03364 HpnW_proposed: FAD dependent oxidoreductase TIGR03364 2 365 8.8E-95 T 14-10-2018 IPR017741 FAD-dependent oxidoreductase, HpnW AMIS_69950 438a9f66c3d538878cd59129ab3c3ce2 390 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 19 361 4.1E-130 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AMIS_69950 438a9f66c3d538878cd59129ab3c3ce2 390 Gene3D G3DSA:3.30.413.10 273 372 9.4E-36 T 14-10-2018 AMIS_69950 438a9f66c3d538878cd59129ab3c3ce2 390 SUPERFAMILY SSF56014 278 356 1.1E-12 T 14-10-2018 AMIS_69950 438a9f66c3d538878cd59129ab3c3ce2 390 Gene3D G3DSA:3.20.20.20 14 272 4.3E-106 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMIS_69950 438a9f66c3d538878cd59129ab3c3ce2 390 SUPERFAMILY SSF51717 46 220 1.65E-10 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMIS_69950 438a9f66c3d538878cd59129ab3c3ce2 390 PIRSF PIRSF004640 13 373 3.4E-145 T 14-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AMIS_69950 438a9f66c3d538878cd59129ab3c3ce2 390 Pfam PF04551 GcpE protein 23 362 1.5E-132 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AMIS_69950 438a9f66c3d538878cd59129ab3c3ce2 390 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 17 368 33.67 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AMIS_27970 e661bb3ef306bc1e42412aab1d6d0578 463 SUPERFAMILY SSF75005 75 310 7.25E-15 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMIS_27970 e661bb3ef306bc1e42412aab1d6d0578 463 SUPERFAMILY SSF110221 327 461 1.83E-41 T 14-10-2018 IPR036195 Alpha-L-arabinofuranosidase B, arabinose-binding domain superfamily GO:0046373|GO:0046556 AMIS_27970 e661bb3ef306bc1e42412aab1d6d0578 463 Gene3D G3DSA:2.80.10.50 325 463 8.3E-54 T 14-10-2018 AMIS_27970 e661bb3ef306bc1e42412aab1d6d0578 463 Gene3D G3DSA:2.115.10.20 72 315 1.8E-13 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMIS_27970 e661bb3ef306bc1e42412aab1d6d0578 463 Pfam PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain 328 462 2.6E-47 T 14-10-2018 IPR007934 Alpha-L-arabinofuranosidase B, arabinose-binding domain GO:0046373|GO:0046556 AMIS_42140 e9aee7c3d22a9a3baf4fe3c39ad30186 312 Gene3D G3DSA:3.40.190.10 176 284 3.2E-29 T 14-10-2018 AMIS_42140 e9aee7c3d22a9a3baf4fe3c39ad30186 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 68 6.1E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_42140 e9aee7c3d22a9a3baf4fe3c39ad30186 312 Gene3D G3DSA:1.10.10.10 7 99 4.1E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_42140 e9aee7c3d22a9a3baf4fe3c39ad30186 312 Gene3D G3DSA:3.40.190.10 100 290 3.2E-29 T 14-10-2018 AMIS_42140 e9aee7c3d22a9a3baf4fe3c39ad30186 312 SUPERFAMILY SSF53850 96 307 3.77E-34 T 14-10-2018 AMIS_42140 e9aee7c3d22a9a3baf4fe3c39ad30186 312 SUPERFAMILY SSF46785 6 117 1.56E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_42140 e9aee7c3d22a9a3baf4fe3c39ad30186 312 Pfam PF03466 LysR substrate binding domain 95 307 5.8E-40 T 14-10-2018 IPR005119 LysR, substrate-binding AMIS_70960 075f77c73874e1a1c7cce975baa68de9 484 ProSitePatterns PS00450 Aconitase family signature 1. 358 374 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AMIS_70960 075f77c73874e1a1c7cce975baa68de9 484 Pfam PF00330 Aconitase family (aconitate hydratase) 16 476 5.1E-162 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMIS_70960 075f77c73874e1a1c7cce975baa68de9 484 Gene3D G3DSA:3.30.499.20 13 305 1.2E-98 T 14-10-2018 AMIS_70960 075f77c73874e1a1c7cce975baa68de9 484 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 10 484 58.017 T 14-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 AMIS_70960 075f77c73874e1a1c7cce975baa68de9 484 SUPERFAMILY SSF53732 9 482 1.44E-165 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 AMIS_70960 075f77c73874e1a1c7cce975baa68de9 484 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 11 479 1.4E-224 T 14-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 AMIS_70960 075f77c73874e1a1c7cce975baa68de9 484 Gene3D G3DSA:3.30.499.10 343 484 2.8E-49 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 AMIS_70960 075f77c73874e1a1c7cce975baa68de9 484 PRINTS PR00415 Aconitase family signature 127 135 4.1E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMIS_70960 075f77c73874e1a1c7cce975baa68de9 484 PRINTS PR00415 Aconitase family signature 152 167 4.1E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMIS_70960 075f77c73874e1a1c7cce975baa68de9 484 PRINTS PR00415 Aconitase family signature 214 227 4.1E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMIS_70960 075f77c73874e1a1c7cce975baa68de9 484 PRINTS PR00415 Aconitase family signature 362 373 4.1E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMIS_70960 075f77c73874e1a1c7cce975baa68de9 484 PRINTS PR00415 Aconitase family signature 101 114 4.1E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMIS_70960 075f77c73874e1a1c7cce975baa68de9 484 PRINTS PR00415 Aconitase family signature 418 431 4.1E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMIS_70960 075f77c73874e1a1c7cce975baa68de9 484 PRINTS PR00415 Aconitase family signature 305 319 4.1E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMIS_70960 075f77c73874e1a1c7cce975baa68de9 484 PRINTS PR00415 Aconitase family signature 138 151 4.1E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMIS_70960 075f77c73874e1a1c7cce975baa68de9 484 PRINTS PR00415 Aconitase family signature 228 241 4.1E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMIS_70960 075f77c73874e1a1c7cce975baa68de9 484 ProSitePatterns PS01244 Aconitase family signature 2. 418 431 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AMIS_62920 d3b9f10bf4039d93882e2a2f8828dc5b 383 Gene3D G3DSA:3.30.9.50 41 263 8.4E-62 T 14-10-2018 AMIS_62920 d3b9f10bf4039d93882e2a2f8828dc5b 383 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 142 157 8.1E-14 T 14-10-2018 AMIS_62920 d3b9f10bf4039d93882e2a2f8828dc5b 383 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 8.1E-14 T 14-10-2018 AMIS_62920 d3b9f10bf4039d93882e2a2f8828dc5b 383 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 273 288 8.1E-14 T 14-10-2018 AMIS_62920 d3b9f10bf4039d93882e2a2f8828dc5b 383 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 288 304 8.1E-14 T 14-10-2018 AMIS_62920 d3b9f10bf4039d93882e2a2f8828dc5b 383 SUPERFAMILY SSF51905 5 361 1.01E-49 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_62920 d3b9f10bf4039d93882e2a2f8828dc5b 383 Pfam PF01494 FAD binding domain 6 335 2.6E-9 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 AMIS_62920 d3b9f10bf4039d93882e2a2f8828dc5b 383 Gene3D G3DSA:3.50.50.60 8 327 8.4E-62 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_76810 5c9166a15718500e597637fe29a03add 294 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 9 157 3.4E-14 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_76810 5c9166a15718500e597637fe29a03add 294 SUPERFAMILY SSF54427 169 286 9.0E-15 T 14-10-2018 IPR032710 NTF2-like domain superfamily AMIS_76810 5c9166a15718500e597637fe29a03add 294 SUPERFAMILY SSF88659 101 158 7.29E-10 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_76810 5c9166a15718500e597637fe29a03add 294 Pfam PF04542 Sigma-70 region 2 9 70 3.1E-12 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_76810 5c9166a15718500e597637fe29a03add 294 Gene3D G3DSA:1.10.1740.10 4 74 7.2E-10 T 14-10-2018 AMIS_76810 5c9166a15718500e597637fe29a03add 294 Pfam PF08281 Sigma-70, region 4 106 156 7.8E-10 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_76810 5c9166a15718500e597637fe29a03add 294 Gene3D G3DSA:1.10.10.10 102 160 1.2E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_76810 5c9166a15718500e597637fe29a03add 294 Gene3D G3DSA:3.10.450.50 165 289 6.1E-10 T 14-10-2018 AMIS_76810 5c9166a15718500e597637fe29a03add 294 SUPERFAMILY SSF88946 7 67 9.42E-13 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_26430 b39334c14f24fede1c4e369165919519 304 Gene3D G3DSA:1.10.10.10 5 92 6.7E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_26430 b39334c14f24fede1c4e369165919519 304 Gene3D G3DSA:3.40.190.10 96 280 4.4E-39 T 14-10-2018 AMIS_26430 b39334c14f24fede1c4e369165919519 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 1.6E-21 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_26430 b39334c14f24fede1c4e369165919519 304 Gene3D G3DSA:3.40.190.10 173 273 4.4E-39 T 14-10-2018 AMIS_26430 b39334c14f24fede1c4e369165919519 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 3.1E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_26430 b39334c14f24fede1c4e369165919519 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 3.1E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_26430 b39334c14f24fede1c4e369165919519 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 3.1E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_26430 b39334c14f24fede1c4e369165919519 304 Pfam PF03466 LysR substrate binding domain 92 296 6.3E-36 T 14-10-2018 IPR005119 LysR, substrate-binding AMIS_26430 b39334c14f24fede1c4e369165919519 304 SUPERFAMILY SSF53850 95 298 1.36E-30 T 14-10-2018 AMIS_26430 b39334c14f24fede1c4e369165919519 304 SUPERFAMILY SSF46785 4 115 5.06E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_49860 e304ea3d1771ebd15a7b3bc647b25457 532 SMART SM00637 432 531 4.0E-40 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 AMIS_49860 e304ea3d1771ebd15a7b3bc647b25457 532 SUPERFAMILY SSF49384 428 531 5.37E-30 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 AMIS_49860 e304ea3d1771ebd15a7b3bc647b25457 532 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 62 369 2.9E-64 T 14-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 AMIS_49860 e304ea3d1771ebd15a7b3bc647b25457 532 SUPERFAMILY SSF51445 38 399 1.57E-75 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_49860 e304ea3d1771ebd15a7b3bc647b25457 532 Pfam PF00553 Cellulose binding domain 433 531 1.1E-26 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 AMIS_49860 e304ea3d1771ebd15a7b3bc647b25457 532 Gene3D G3DSA:3.20.20.80 39 400 2.7E-121 T 14-10-2018 AMIS_49860 e304ea3d1771ebd15a7b3bc647b25457 532 Gene3D G3DSA:2.60.40.290 425 532 1.2E-33 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 AMIS_11310 ca678fc859c3777479373dddec4c209d 115 Pfam PF14017 Protein of unknown function (DUF4233) 16 113 9.1E-23 T 14-10-2018 IPR025327 Protein of unknown function DUF4233 AMIS_32320 b9400b709d513e9bf23dddab94f319a5 2860 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1327 1338 - T 14-10-2018 IPR020845 AMP-binding, conserved site AMIS_32320 b9400b709d513e9bf23dddab94f319a5 2860 SUPERFAMILY SSF56801 2203 2757 2.22E-154 T 14-10-2018 AMIS_32320 b9400b709d513e9bf23dddab94f319a5 2860 Gene3D G3DSA:3.30.559.10 1780 2153 2.9E-127 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AMIS_32320 b9400b709d513e9bf23dddab94f319a5 2860 Gene3D G3DSA:3.30.559.10 711 1069 2.1E-116 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AMIS_32320 b9400b709d513e9bf23dddab94f319a5 2860 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2383 2394 - T 14-10-2018 IPR020845 AMP-binding, conserved site AMIS_32320 b9400b709d513e9bf23dddab94f319a5 2860 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1710 1725 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site AMIS_32320 b9400b709d513e9bf23dddab94f319a5 2860 SUPERFAMILY SSF56801 1134 1699 7.06E-153 T 14-10-2018 AMIS_32320 b9400b709d513e9bf23dddab94f319a5 2860 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2265 2657 1.7E-126 T 14-10-2018 IPR010071 Amino acid adenylation domain AMIS_32320 b9400b709d513e9bf23dddab94f319a5 2860 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1198 1599 1.8E-123 T 14-10-2018 IPR010071 Amino acid adenylation domain AMIS_32320 b9400b709d513e9bf23dddab94f319a5 2860 Gene3D G3DSA:3.40.50.12780 2232 2627 2.0E-129 T 14-10-2018 AMIS_32320 b9400b709d513e9bf23dddab94f319a5 2860 Pfam PF13193 AMP-binding enzyme C-terminal domain 2641 2717 2.3E-12 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AMIS_32320 b9400b709d513e9bf23dddab94f319a5 2860 Pfam PF13193 AMP-binding enzyme C-terminal domain 1583 1659 2.3E-12 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AMIS_32320 b9400b709d513e9bf23dddab94f319a5 2860 SUPERFAMILY SSF47336 2737 2809 5.37E-17 T 14-10-2018 IPR036736 ACP-like superfamily AMIS_32320 b9400b709d513e9bf23dddab94f319a5 2860 Gene3D G3DSA:1.10.1200.10 1675 1755 5.8E-27 T 14-10-2018 IPR036736 ACP-like superfamily AMIS_32320 b9400b709d513e9bf23dddab94f319a5 2860 SMART SM00823 Phosphopantetheine attachment site 1686 1755 2.5E-9 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AMIS_32320 b9400b709d513e9bf23dddab94f319a5 2860 SMART SM00823 Phosphopantetheine attachment site 624 680 6.2E-7 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AMIS_32320 b9400b709d513e9bf23dddab94f319a5 2860 SMART SM00823 Phosphopantetheine attachment site 2744 2813 0.0018 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AMIS_32320 b9400b709d513e9bf23dddab94f319a5 2860 ProSitePatterns PS00012 Phosphopantetheine attachment site. 651 666 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site AMIS_32320 b9400b709d513e9bf23dddab94f319a5 2860 Gene3D G3DSA:3.30.559.30 1963 2209 2.9E-127 T 14-10-2018 AMIS_32320 b9400b709d513e9bf23dddab94f319a5 2860 Gene3D G3DSA:3.30.559.30 883 1142 2.1E-116 T 14-10-2018 AMIS_32320 b9400b709d513e9bf23dddab94f319a5 2860 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2768 2783 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site AMIS_32320 b9400b709d513e9bf23dddab94f319a5 2860 SUPERFAMILY SSF47336 620 710 3.93E-12 T 14-10-2018 IPR036736 ACP-like superfamily AMIS_32320 b9400b709d513e9bf23dddab94f319a5 2860 Pfam PF00668 Condensation domain 1780 2223 2.0E-87 T 14-10-2018 IPR001242 Condensation domain AMIS_32320 b9400b709d513e9bf23dddab94f319a5 2860 Pfam PF00668 Condensation domain 712 1156 5.2E-77 T 14-10-2018 IPR001242 Condensation domain AMIS_32320 b9400b709d513e9bf23dddab94f319a5 2860 Pfam PF00501 AMP-binding enzyme 2245 2633 1.8E-97 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMIS_32320 b9400b709d513e9bf23dddab94f319a5 2860 Pfam PF00501 AMP-binding enzyme 21 484 3.8E-83 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMIS_32320 b9400b709d513e9bf23dddab94f319a5 2860 Pfam PF00501 AMP-binding enzyme 1178 1575 2.5E-90 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMIS_32320 b9400b709d513e9bf23dddab94f319a5 2860 SUPERFAMILY SSF56801 12 588 1.44E-108 T 14-10-2018 AMIS_32320 b9400b709d513e9bf23dddab94f319a5 2860 SUPERFAMILY SSF47336 1679 1751 2.09E-20 T 14-10-2018 IPR036736 ACP-like superfamily AMIS_32320 b9400b709d513e9bf23dddab94f319a5 2860 Gene3D G3DSA:1.10.1200.10 617 695 2.2E-10 T 14-10-2018 IPR036736 ACP-like superfamily AMIS_32320 b9400b709d513e9bf23dddab94f319a5 2860 SUPERFAMILY SSF52777 1782 1959 9.78E-37 T 14-10-2018 AMIS_32320 b9400b709d513e9bf23dddab94f319a5 2860 Gene3D G3DSA:3.30.300.30 1569 1674 6.9E-35 T 14-10-2018 AMIS_32320 b9400b709d513e9bf23dddab94f319a5 2860 Gene3D G3DSA:3.30.300.30 2628 2732 6.9E-35 T 14-10-2018 AMIS_32320 b9400b709d513e9bf23dddab94f319a5 2860 Pfam PF00550 Phosphopantetheine attachment site 1688 1751 2.5E-14 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain AMIS_32320 b9400b709d513e9bf23dddab94f319a5 2860 Pfam PF00550 Phosphopantetheine attachment site 628 686 1.2E-9 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain AMIS_32320 b9400b709d513e9bf23dddab94f319a5 2860 Pfam PF00550 Phosphopantetheine attachment site 2746 2807 5.3E-12 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain AMIS_32320 b9400b709d513e9bf23dddab94f319a5 2860 Gene3D G3DSA:3.40.50.12780 8 477 1.1E-150 T 14-10-2018 AMIS_32320 b9400b709d513e9bf23dddab94f319a5 2860 SUPERFAMILY SSF52777 1965 2213 9.64E-63 T 14-10-2018 AMIS_32320 b9400b709d513e9bf23dddab94f319a5 2860 Gene3D G3DSA:3.40.50.12780 1167 1567 4.2E-126 T 14-10-2018 AMIS_32320 b9400b709d513e9bf23dddab94f319a5 2860 Gene3D G3DSA:3.30.300.30 479 601 1.6E-41 T 14-10-2018 AMIS_32320 b9400b709d513e9bf23dddab94f319a5 2860 Gene3D G3DSA:3.40.50.1820 2733 2838 7.7E-24 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_32320 b9400b709d513e9bf23dddab94f319a5 2860 SUPERFAMILY SSF52777 887 1164 1.07E-47 T 14-10-2018 AMIS_32320 b9400b709d513e9bf23dddab94f319a5 2860 SUPERFAMILY SSF52777 711 879 1.07E-41 T 14-10-2018 AMIS_42650 794ae9193746cc78ca1909b0fb4778b6 393 SUPERFAMILY SSF53901 4 264 1.75E-73 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_42650 794ae9193746cc78ca1909b0fb4778b6 393 Gene3D G3DSA:3.40.47.10 142 389 2.6E-134 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_42650 794ae9193746cc78ca1909b0fb4778b6 393 Pfam PF02803 Thiolase, C-terminal domain 271 390 5.8E-41 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 AMIS_42650 794ae9193746cc78ca1909b0fb4778b6 393 Gene3D G3DSA:3.40.47.10 7 275 2.6E-134 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_42650 794ae9193746cc78ca1909b0fb4778b6 393 ProSitePatterns PS00099 Thiolases active site. 373 386 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 AMIS_42650 794ae9193746cc78ca1909b0fb4778b6 393 PIRSF PIRSF000429 1 393 3.5E-121 T 14-10-2018 IPR002155 Thiolase GO:0016747 AMIS_42650 794ae9193746cc78ca1909b0fb4778b6 393 SUPERFAMILY SSF53901 271 390 1.29E-39 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_42650 794ae9193746cc78ca1909b0fb4778b6 393 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 390 3.1E-128 T 14-10-2018 IPR002155 Thiolase GO:0016747 AMIS_42650 794ae9193746cc78ca1909b0fb4778b6 393 ProSitePatterns PS00737 Thiolases signature 2. 338 354 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 AMIS_42650 794ae9193746cc78ca1909b0fb4778b6 393 Pfam PF00108 Thiolase, N-terminal domain 8 260 1.9E-66 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 AMIS_26930 c9d0a100a86d2222d0c89235424dacc8 116 SUPERFAMILY SSF52172 1 114 2.85E-32 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_26930 c9d0a100a86d2222d0c89235424dacc8 116 Pfam PF00072 Response regulator receiver domain 1 110 8.3E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_26930 c9d0a100a86d2222d0c89235424dacc8 116 Gene3D G3DSA:3.40.50.12740 1 116 1.4E-32 T 14-10-2018 AMIS_26930 c9d0a100a86d2222d0c89235424dacc8 116 SMART SM00448 1 110 7.0E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_47600 37f991a1d7c178b238dc53948ecf17fc 515 SUPERFAMILY SSF51703 3 514 2.51E-204 T 14-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 AMIS_47600 37f991a1d7c178b238dc53948ecf17fc 515 Gene3D G3DSA:3.20.20.440 1 515 9.2E-209 T 14-10-2018 IPR037086 D-Lysine 5,6-aminomutase alpha subunit superfamily AMIS_47600 37f991a1d7c178b238dc53948ecf17fc 515 Pfam PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit 5 512 1.7E-242 T 14-10-2018 IPR015130 D-Lysine 5,6-aminomutase alpha subunit AMIS_68590 701b2e373abb1ff74a11f36695907cc1 576 Gene3D G3DSA:3.40.50.300 11 178 3.6E-18 T 14-10-2018 AMIS_68590 701b2e373abb1ff74a11f36695907cc1 576 Gene3D G3DSA:3.40.50.300 194 383 4.8E-14 T 14-10-2018 AMIS_68590 701b2e373abb1ff74a11f36695907cc1 576 SUPERFAMILY SSF52540 30 374 1.8E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_68590 701b2e373abb1ff74a11f36695907cc1 576 SMART SM00382 29 191 0.0027 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_68590 701b2e373abb1ff74a11f36695907cc1 576 Pfam PF04851 Type III restriction enzyme, res subunit 14 166 1.7E-10 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AMIS_68590 701b2e373abb1ff74a11f36695907cc1 576 SMART SM00487 10 188 1.2E-13 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMIS_41180 b5fd308cde08e99846758baab130e826 537 SUPERFAMILY SSF52009 372 494 5.36E-32 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 AMIS_41180 b5fd308cde08e99846758baab130e826 537 Gene3D G3DSA:1.10.189.10 331 512 1.8E-59 T 14-10-2018 AMIS_41180 b5fd308cde08e99846758baab130e826 537 Gene3D G3DSA:3.30.470.20 230 327 1.2E-29 T 14-10-2018 AMIS_41180 b5fd308cde08e99846758baab130e826 537 Gene3D G3DSA:3.50.30.10 369 492 1.8E-59 T 14-10-2018 AMIS_41180 b5fd308cde08e99846758baab130e826 537 Pfam PF00391 PEP-utilising enzyme, mobile domain 406 486 4.2E-24 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AMIS_41180 b5fd308cde08e99846758baab130e826 537 Gene3D G3DSA:1.20.80.30 110 184 1.8E-68 T 14-10-2018 AMIS_41180 b5fd308cde08e99846758baab130e826 537 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 56 276 4.5E-27 T 14-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 AMIS_41180 b5fd308cde08e99846758baab130e826 537 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 290 336 1.6E-5 T 14-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 AMIS_41180 b5fd308cde08e99846758baab130e826 537 Gene3D G3DSA:3.30.1490.20 18 229 1.8E-68 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AMIS_41180 b5fd308cde08e99846758baab130e826 537 SUPERFAMILY SSF56059 16 360 8.36E-103 T 14-10-2018 AMIS_30130 823a15756ac292b7daeb96a24188e726 415 Gene3D G3DSA:1.20.1250.20 15 414 2.7E-32 T 14-10-2018 AMIS_30130 823a15756ac292b7daeb96a24188e726 415 SUPERFAMILY SSF103473 18 409 1.7E-40 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_30130 823a15756ac292b7daeb96a24188e726 415 Pfam PF07690 Major Facilitator Superfamily 243 406 1.0E-11 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_3540 1f8c18556d0e51513d142be8f39c2cf2 432 Pfam PF05977 Transmembrane secretion effector 14 407 8.6E-37 T 14-10-2018 IPR010290 Transmembrane secretion effector AMIS_3540 1f8c18556d0e51513d142be8f39c2cf2 432 Gene3D G3DSA:1.20.1250.20 17 398 8.5E-33 T 14-10-2018 AMIS_3540 1f8c18556d0e51513d142be8f39c2cf2 432 SUPERFAMILY SSF103473 21 407 3.66E-40 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_46170 4df1baee9c5c713f273bd3b92513a253 828 Pfam PF00270 DEAD/DEAH box helicase 33 178 1.3E-9 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMIS_46170 4df1baee9c5c713f273bd3b92513a253 828 Gene3D G3DSA:3.40.50.300 211 379 2.7E-39 T 14-10-2018 AMIS_46170 4df1baee9c5c713f273bd3b92513a253 828 SUPERFAMILY SSF52540 45 376 5.52E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_46170 4df1baee9c5c713f273bd3b92513a253 828 Pfam PF00271 Helicase conserved C-terminal domain 284 363 4.6E-6 T 14-10-2018 IPR001650 Helicase, C-terminal AMIS_46170 4df1baee9c5c713f273bd3b92513a253 828 Pfam PF12029 Domain of unknown function (DUF3516) 374 825 1.2E-209 T 14-10-2018 IPR021904 Protein of unknown function DUF3516 AMIS_46170 4df1baee9c5c713f273bd3b92513a253 828 SMART SM00487 27 211 1.1E-16 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMIS_46170 4df1baee9c5c713f273bd3b92513a253 828 SMART SM00490 277 363 1.7E-13 T 14-10-2018 IPR001650 Helicase, C-terminal AMIS_46170 4df1baee9c5c713f273bd3b92513a253 828 Gene3D G3DSA:3.40.50.300 25 204 2.0E-37 T 14-10-2018 AMIS_24090 a884d69544d81e90b7874875a3ee3dc0 405 Gene3D G3DSA:3.90.1150.10 40 384 1.7E-122 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMIS_24090 a884d69544d81e90b7874875a3ee3dc0 405 Gene3D G3DSA:3.40.640.10 60 293 1.7E-122 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_24090 a884d69544d81e90b7874875a3ee3dc0 405 Pfam PF00155 Aminotransferase class I and II 46 382 7.2E-59 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMIS_24090 a884d69544d81e90b7874875a3ee3dc0 405 SUPERFAMILY SSF53383 13 390 3.55E-99 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_26990 e61164f37bfd5cbca3ea5b3afbebbffb 456 SUPERFAMILY SSF54373 290 392 3.4E-24 T 14-10-2018 AMIS_26990 e61164f37bfd5cbca3ea5b3afbebbffb 456 Gene3D G3DSA:3.50.50.60 10 440 7.5E-134 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_26990 e61164f37bfd5cbca3ea5b3afbebbffb 456 PRINTS PR00757 Flavin-containing amine oxidase signature 394 416 6.6E-19 T 14-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 AMIS_26990 e61164f37bfd5cbca3ea5b3afbebbffb 456 PRINTS PR00757 Flavin-containing amine oxidase signature 293 312 6.6E-19 T 14-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 AMIS_26990 e61164f37bfd5cbca3ea5b3afbebbffb 456 PRINTS PR00757 Flavin-containing amine oxidase signature 425 442 6.6E-19 T 14-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 AMIS_26990 e61164f37bfd5cbca3ea5b3afbebbffb 456 PRINTS PR00757 Flavin-containing amine oxidase signature 174 195 6.6E-19 T 14-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 AMIS_26990 e61164f37bfd5cbca3ea5b3afbebbffb 456 PRINTS PR00757 Flavin-containing amine oxidase signature 10 29 6.6E-19 T 14-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 AMIS_26990 e61164f37bfd5cbca3ea5b3afbebbffb 456 PRINTS PR00757 Flavin-containing amine oxidase signature 197 219 6.6E-19 T 14-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 AMIS_26990 e61164f37bfd5cbca3ea5b3afbebbffb 456 SUPERFAMILY SSF51905 7 447 1.21E-64 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_26990 e61164f37bfd5cbca3ea5b3afbebbffb 456 Gene3D G3DSA:1.10.405.10 110 199 7.5E-134 T 14-10-2018 AMIS_26990 e61164f37bfd5cbca3ea5b3afbebbffb 456 Gene3D G3DSA:3.90.660.10 46 392 7.5E-134 T 14-10-2018 AMIS_26990 e61164f37bfd5cbca3ea5b3afbebbffb 456 Pfam PF01593 Flavin containing amine oxidoreductase 18 443 6.4E-59 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 AMIS_10800 a24ea3b83083c250a6ba9d956efa8b01 499 Gene3D G3DSA:3.30.470.30 186 371 8.3E-45 T 14-10-2018 AMIS_10800 a24ea3b83083c250a6ba9d956efa8b01 499 SUPERFAMILY SSF50249 374 496 4.45E-33 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMIS_10800 a24ea3b83083c250a6ba9d956efa8b01 499 TIGRFAM TIGR00574 dnl1: DNA ligase I, ATP-dependent (dnl1) 73 496 7.3E-75 T 14-10-2018 IPR000977 DNA ligase, ATP-dependent GO:0003910|GO:0005524|GO:0006281|GO:0006310|GO:0071897 AMIS_10800 a24ea3b83083c250a6ba9d956efa8b01 499 SUPERFAMILY SSF117018 3 192 2.22E-26 T 14-10-2018 IPR036599 DNA ligase, ATP-dependent, N-terminal domain superfamily GO:0003677|GO:0003910|GO:0006281|GO:0006310 AMIS_10800 a24ea3b83083c250a6ba9d956efa8b01 499 ProSitePatterns PS00697 ATP-dependent DNA ligase AMP-binding site. 212 220 - T 14-10-2018 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 AMIS_10800 a24ea3b83083c250a6ba9d956efa8b01 499 Pfam PF04675 DNA ligase N terminus 71 140 3.9E-6 T 14-10-2018 IPR012308 DNA ligase, ATP-dependent, N-terminal GO:0003677|GO:0003910|GO:0006281|GO:0006310 AMIS_10800 a24ea3b83083c250a6ba9d956efa8b01 499 Gene3D G3DSA:1.10.3260.10 2 185 5.2E-38 T 14-10-2018 IPR036599 DNA ligase, ATP-dependent, N-terminal domain superfamily GO:0003677|GO:0003910|GO:0006281|GO:0006310 AMIS_10800 a24ea3b83083c250a6ba9d956efa8b01 499 Pfam PF04679 ATP dependent DNA ligase C terminal region 390 482 1.2E-13 T 14-10-2018 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 AMIS_10800 a24ea3b83083c250a6ba9d956efa8b01 499 SUPERFAMILY SSF56091 159 372 9.11E-39 T 14-10-2018 AMIS_10800 a24ea3b83083c250a6ba9d956efa8b01 499 Gene3D G3DSA:2.40.50.140 372 499 5.4E-35 T 14-10-2018 AMIS_10800 a24ea3b83083c250a6ba9d956efa8b01 499 Pfam PF01068 ATP dependent DNA ligase domain 189 371 5.5E-36 T 14-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 AMIS_33910 3f21762e9ab10c65b5dc2b1137d2f08f 303 Gene3D G3DSA:2.60.200.30 155 297 6.5E-6 T 14-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 AMIS_33910 3f21762e9ab10c65b5dc2b1137d2f08f 303 SUPERFAMILY SSF111331 62 216 1.99E-11 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily AMIS_33910 3f21762e9ab10c65b5dc2b1137d2f08f 303 Gene3D G3DSA:3.40.50.10330 91 303 6.5E-6 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 AMIS_1380 3cb8d43d8dcaf64e512e755a9d53df7a 936 Gene3D G3DSA:2.60.40.2700 753 840 3.7E-7 T 14-10-2018 AMIS_62370 db7810f2432e25969966a3b9645224fe 534 Gene3D G3DSA:1.10.3710.10 363 456 1.7E-25 T 14-10-2018 AMIS_62370 db7810f2432e25969966a3b9645224fe 534 SUPERFAMILY SSF52540 32 253 1.25E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_62370 db7810f2432e25969966a3b9645224fe 534 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 77 96 1.4E-5 T 14-10-2018 AMIS_62370 db7810f2432e25969966a3b9645224fe 534 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 339 358 1.4E-5 T 14-10-2018 AMIS_62370 db7810f2432e25969966a3b9645224fe 534 Gene3D G3DSA:1.10.8.60 186 253 6.4E-11 T 14-10-2018 AMIS_62370 db7810f2432e25969966a3b9645224fe 534 Gene3D G3DSA:1.20.272.10 258 362 5.2E-47 T 14-10-2018 AMIS_62370 db7810f2432e25969966a3b9645224fe 534 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 73 178 4.5E-17 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMIS_62370 db7810f2432e25969966a3b9645224fe 534 SUPERFAMILY SSF48019 270 453 6.8E-74 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AMIS_62370 db7810f2432e25969966a3b9645224fe 534 SMART SM00382 69 186 5.5E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_62370 db7810f2432e25969966a3b9645224fe 534 Pfam PF16193 AAA C-terminal domain 208 284 4.8E-26 T 14-10-2018 IPR032423 AAA C-terminal domain AMIS_62370 db7810f2432e25969966a3b9645224fe 534 Gene3D G3DSA:3.40.50.300 29 185 6.9E-40 T 14-10-2018 AMIS_62370 db7810f2432e25969966a3b9645224fe 534 Pfam PF12002 MgsA AAA+ ATPase C terminal 285 450 4.8E-69 T 14-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal AMIS_16410 622087c862c0e0ca0562af0cd7181d62 534 Pfam PF00005 ABC transporter 344 473 1.9E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_16410 622087c862c0e0ca0562af0cd7181d62 534 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_16410 622087c862c0e0ca0562af0cd7181d62 534 SUPERFAMILY SSF52540 3 234 5.83E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_16410 622087c862c0e0ca0562af0cd7181d62 534 Gene3D G3DSA:3.40.50.300 10 289 1.6E-52 T 14-10-2018 AMIS_16410 622087c862c0e0ca0562af0cd7181d62 534 Pfam PF12848 ABC transporter 233 306 6.8E-9 T 14-10-2018 IPR032781 ABC-transporter extension domain AMIS_16410 622087c862c0e0ca0562af0cd7181d62 534 Pfam PF00005 ABC transporter 20 189 3.4E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_16410 622087c862c0e0ca0562af0cd7181d62 534 SUPERFAMILY SSF52540 308 518 5.24E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_16410 622087c862c0e0ca0562af0cd7181d62 534 ProSitePatterns PS00211 ABC transporters family signature. 445 459 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_16410 622087c862c0e0ca0562af0cd7181d62 534 SMART SM00382 352 519 8.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_16410 622087c862c0e0ca0562af0cd7181d62 534 SMART SM00382 26 234 6.1E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_16410 622087c862c0e0ca0562af0cd7181d62 534 Gene3D G3DSA:3.40.50.300 292 525 6.8E-53 T 14-10-2018 AMIS_32020 fb926bfdd11b38275ba29455f418eae8 313 Gene3D G3DSA:1.10.3720.10 98 310 3.3E-24 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_32020 fb926bfdd11b38275ba29455f418eae8 313 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 26 69 4.0E-13 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AMIS_32020 fb926bfdd11b38275ba29455f418eae8 313 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 126 312 1.4E-31 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_32020 fb926bfdd11b38275ba29455f418eae8 313 SUPERFAMILY SSF161098 103 293 6.02E-28 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_46450 0ff3252e4fd4bbab16eb1bd4d5455d36 237 SMART SM00895 104 226 7.0E-12 T 14-10-2018 IPR011711 GntR, C-terminal AMIS_46450 0ff3252e4fd4bbab16eb1bd4d5455d36 237 SMART SM00345 15 74 3.0E-19 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_46450 0ff3252e4fd4bbab16eb1bd4d5455d36 237 SUPERFAMILY SSF46785 4 78 4.29E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_46450 0ff3252e4fd4bbab16eb1bd4d5455d36 237 Gene3D G3DSA:1.10.10.10 6 82 1.7E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_46450 0ff3252e4fd4bbab16eb1bd4d5455d36 237 Pfam PF07729 FCD domain 104 225 2.4E-14 T 14-10-2018 IPR011711 GntR, C-terminal AMIS_46450 0ff3252e4fd4bbab16eb1bd4d5455d36 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 2.2E-21 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_46450 0ff3252e4fd4bbab16eb1bd4d5455d36 237 SUPERFAMILY SSF48008 103 225 1.2E-14 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AMIS_46450 0ff3252e4fd4bbab16eb1bd4d5455d36 237 Gene3D G3DSA:1.20.120.530 84 230 1.1E-16 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AMIS_46450 0ff3252e4fd4bbab16eb1bd4d5455d36 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 1.7E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_46450 0ff3252e4fd4bbab16eb1bd4d5455d36 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 1.7E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_68510 414199bd87765ec6c5a608aab535c58a 168 Pfam PF00692 dUTPase 27 156 2.0E-29 T 14-10-2018 IPR029054 dUTPase-like AMIS_68510 414199bd87765ec6c5a608aab535c58a 168 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 15 157 29.996 T 14-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 AMIS_68510 414199bd87765ec6c5a608aab535c58a 168 Gene3D G3DSA:2.70.40.10 7 161 1.8E-50 T 14-10-2018 IPR036157 dUTPase-like superfamily AMIS_68510 414199bd87765ec6c5a608aab535c58a 168 TIGRFAM TIGR00576 dut: dUTP diphosphatase 18 156 2.6E-50 T 14-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 AMIS_68510 414199bd87765ec6c5a608aab535c58a 168 SUPERFAMILY SSF51283 14 156 4.97E-46 T 14-10-2018 IPR036157 dUTPase-like superfamily AMIS_25700 73cc4f7a68e8b606dd1316141aa0fffb 675 SUPERFAMILY SSF55874 576 668 4.58E-17 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_25700 73cc4f7a68e8b606dd1316141aa0fffb 675 SUPERFAMILY SSF55781 287 447 5.23E-14 T 14-10-2018 AMIS_25700 73cc4f7a68e8b606dd1316141aa0fffb 675 Pfam PF07730 Histidine kinase 482 547 1.4E-8 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMIS_25700 73cc4f7a68e8b606dd1316141aa0fffb 675 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 582 669 3.4E-6 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_25700 73cc4f7a68e8b606dd1316141aa0fffb 675 Gene3D G3DSA:3.30.450.40 303 473 5.3E-13 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_25700 73cc4f7a68e8b606dd1316141aa0fffb 675 Gene3D G3DSA:3.30.450.40 129 302 1.4E-13 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_25700 73cc4f7a68e8b606dd1316141aa0fffb 675 SUPERFAMILY SSF55781 154 304 2.84E-11 T 14-10-2018 AMIS_25700 73cc4f7a68e8b606dd1316141aa0fffb 675 SMART SM00065 306 468 0.0021 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_25700 73cc4f7a68e8b606dd1316141aa0fffb 675 SMART SM00065 151 302 1.4E-5 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_25700 73cc4f7a68e8b606dd1316141aa0fffb 675 Pfam PF01590 GAF domain 325 457 3.8E-7 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_25700 73cc4f7a68e8b606dd1316141aa0fffb 675 Pfam PF01590 GAF domain 154 292 1.9E-6 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_25700 73cc4f7a68e8b606dd1316141aa0fffb 675 SMART SM00387 580 670 1.3E-6 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_25700 73cc4f7a68e8b606dd1316141aa0fffb 675 Gene3D G3DSA:3.30.565.10 549 669 7.9E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_49830 cdc0a2ec764e48a85c866819b6448a69 524 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 48 495 4.1E-162 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 AMIS_49830 cdc0a2ec764e48a85c866819b6448a69 524 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 16 494 3.4E-184 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 AMIS_49830 cdc0a2ec764e48a85c866819b6448a69 524 ProSitePatterns PS01303 BCCT family of transporters signature. 313 322 - T 14-10-2018 IPR018093 BCCT transporter, conserved site AMIS_60500 c3b943ca08a71354833cd4e77d3c8082 406 SUPERFAMILY SSF51120 206 300 2.09E-15 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_60500 c3b943ca08a71354833cd4e77d3c8082 406 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 218 236 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site AMIS_60500 c3b943ca08a71354833cd4e77d3c8082 406 SUPERFAMILY SSF51120 108 197 1.06E-12 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_60500 c3b943ca08a71354833cd4e77d3c8082 406 Gene3D G3DSA:2.150.10.10 234 308 2.6E-8 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_60500 c3b943ca08a71354833cd4e77d3c8082 406 Gene3D G3DSA:2.150.10.10 205 233 8.6E-6 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_60500 c3b943ca08a71354833cd4e77d3c8082 406 PRINTS PR00313 NodO calcium binding signature 130 141 6.1E-11 T 14-10-2018 AMIS_60500 c3b943ca08a71354833cd4e77d3c8082 406 PRINTS PR00313 NodO calcium binding signature 272 281 6.1E-11 T 14-10-2018 AMIS_60500 c3b943ca08a71354833cd4e77d3c8082 406 PRINTS PR00313 NodO calcium binding signature 167 175 6.1E-11 T 14-10-2018 AMIS_60500 c3b943ca08a71354833cd4e77d3c8082 406 PRINTS PR00313 NodO calcium binding signature 231 239 6.1E-11 T 14-10-2018 AMIS_60500 c3b943ca08a71354833cd4e77d3c8082 406 Gene3D G3DSA:2.150.10.10 309 404 3.8E-14 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_60500 c3b943ca08a71354833cd4e77d3c8082 406 SUPERFAMILY SSF51120 264 393 1.44E-14 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_60500 c3b943ca08a71354833cd4e77d3c8082 406 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 133 149 0.039 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_60500 c3b943ca08a71354833cd4e77d3c8082 406 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 334 349 0.023 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_60500 c3b943ca08a71354833cd4e77d3c8082 406 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 207 220 0.074 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_60500 c3b943ca08a71354833cd4e77d3c8082 406 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 353 368 0.013 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_60500 c3b943ca08a71354833cd4e77d3c8082 406 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 222 238 0.036 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_60500 c3b943ca08a71354833cd4e77d3c8082 406 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 239 256 0.031 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_60500 c3b943ca08a71354833cd4e77d3c8082 406 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 315 328 39.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_60500 c3b943ca08a71354833cd4e77d3c8082 406 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 160 174 0.057 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_60500 c3b943ca08a71354833cd4e77d3c8082 406 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 175 192 0.011 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_60500 c3b943ca08a71354833cd4e77d3c8082 406 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 264 278 17.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_60500 c3b943ca08a71354833cd4e77d3c8082 406 Gene3D G3DSA:2.150.10.10 35 198 4.2E-14 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_60500 c3b943ca08a71354833cd4e77d3c8082 406 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 236 254 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site AMIS_80570 c19104cd71e837f0c55d94e8fe797c02 149 SUPERFAMILY SSF54909 62 143 3.35E-14 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel AMIS_80570 c19104cd71e837f0c55d94e8fe797c02 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 2.7E-10 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMIS_80570 c19104cd71e837f0c55d94e8fe797c02 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 2.7E-10 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMIS_80570 c19104cd71e837f0c55d94e8fe797c02 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 2.7E-10 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMIS_80570 c19104cd71e837f0c55d94e8fe797c02 149 Pfam PF01037 Lrp/AsnC ligand binding domain 80 138 1.8E-13 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMIS_80570 c19104cd71e837f0c55d94e8fe797c02 149 SMART SM00344 1 108 9.5E-38 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AMIS_80570 c19104cd71e837f0c55d94e8fe797c02 149 SUPERFAMILY SSF46785 1 61 1.68E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_80570 c19104cd71e837f0c55d94e8fe797c02 149 Gene3D G3DSA:1.10.10.10 2 52 8.7E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_80570 c19104cd71e837f0c55d94e8fe797c02 149 Pfam PF13404 AsnC-type helix-turn-helix domain 1 42 2.8E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMIS_80570 c19104cd71e837f0c55d94e8fe797c02 149 Gene3D G3DSA:3.30.70.920 53 146 4.7E-16 T 14-10-2018 AMIS_18760 7f1f84e89504968b40576c24f5b9213e 260 Gene3D G3DSA:3.10.350.10 15 77 1.0E-12 T 14-10-2018 IPR036779 LysM domain superfamily AMIS_18760 7f1f84e89504968b40576c24f5b9213e 260 SMART SM00257 26 70 8.2E-7 T 14-10-2018 IPR018392 LysM domain AMIS_18760 7f1f84e89504968b40576c24f5b9213e 260 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 179 256 1.1E-21 T 14-10-2018 IPR039561 Peptidase M15C GO:0008233 AMIS_18760 7f1f84e89504968b40576c24f5b9213e 260 Gene3D G3DSA:3.30.1380.10 124 256 3.4E-16 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AMIS_18760 7f1f84e89504968b40576c24f5b9213e 260 Pfam PF01476 LysM domain 27 64 1.0E-8 T 14-10-2018 IPR018392 LysM domain AMIS_18760 7f1f84e89504968b40576c24f5b9213e 260 SUPERFAMILY SSF54106 25 69 6.02E-9 T 14-10-2018 AMIS_18760 7f1f84e89504968b40576c24f5b9213e 260 SUPERFAMILY SSF55166 107 256 3.14E-23 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AMIS_67670 66a9b74baee56ee7748f4bbfa7214941 426 SUPERFAMILY SSF55874 325 411 3.42E-12 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_67670 66a9b74baee56ee7748f4bbfa7214941 426 Gene3D G3DSA:3.30.565.10 292 413 6.2E-23 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_67670 66a9b74baee56ee7748f4bbfa7214941 426 Pfam PF13796 Putative sensor 19 195 2.9E-17 T 14-10-2018 IPR025828 Putative sensor domain AMIS_67670 66a9b74baee56ee7748f4bbfa7214941 426 Pfam PF07730 Histidine kinase 224 291 1.1E-14 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMIS_15570 27e48ce0d082b48a851eaf4fae7ac517 586 Pfam PF00664 ABC transporter transmembrane region 28 298 1.8E-31 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AMIS_15570 27e48ce0d082b48a851eaf4fae7ac517 586 SUPERFAMILY SSF52540 335 580 1.02E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_15570 27e48ce0d082b48a851eaf4fae7ac517 586 ProSitePatterns PS00211 ABC transporters family signature. 482 496 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_15570 27e48ce0d082b48a851eaf4fae7ac517 586 Gene3D G3DSA:1.20.1560.10 10 325 7.0E-61 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMIS_15570 27e48ce0d082b48a851eaf4fae7ac517 586 Gene3D G3DSA:3.40.50.300 342 585 1.5E-78 T 14-10-2018 AMIS_15570 27e48ce0d082b48a851eaf4fae7ac517 586 Pfam PF00005 ABC transporter 361 510 5.6E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_15570 27e48ce0d082b48a851eaf4fae7ac517 586 SMART SM00382 370 556 6.5E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_15570 27e48ce0d082b48a851eaf4fae7ac517 586 SUPERFAMILY SSF90123 16 331 7.85E-62 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMIS_28440 24205dbd4bbd4544eb1ee1bb04db2e18 445 Pfam PF07676 WD40-like Beta Propeller Repeat 165 178 0.068 T 14-10-2018 IPR011659 WD40-like Beta Propeller AMIS_28440 24205dbd4bbd4544eb1ee1bb04db2e18 445 Gene3D G3DSA:2.120.10.30 105 338 1.6E-11 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AMIS_28440 24205dbd4bbd4544eb1ee1bb04db2e18 445 SUPERFAMILY SSF82171 122 341 6.67E-15 T 14-10-2018 AMIS_9330 97d3d168214cbc3b60b9bc57f9cda0a8 579 PRINTS PR01165 Cytochrome c oxidase subunit I signature 358 376 1.6E-92 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_9330 97d3d168214cbc3b60b9bc57f9cda0a8 579 PRINTS PR01165 Cytochrome c oxidase subunit I signature 176 194 1.6E-92 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_9330 97d3d168214cbc3b60b9bc57f9cda0a8 579 PRINTS PR01165 Cytochrome c oxidase subunit I signature 234 255 1.6E-92 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_9330 97d3d168214cbc3b60b9bc57f9cda0a8 579 PRINTS PR01165 Cytochrome c oxidase subunit I signature 301 316 1.6E-92 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_9330 97d3d168214cbc3b60b9bc57f9cda0a8 579 PRINTS PR01165 Cytochrome c oxidase subunit I signature 101 125 1.6E-92 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_9330 97d3d168214cbc3b60b9bc57f9cda0a8 579 PRINTS PR01165 Cytochrome c oxidase subunit I signature 205 224 1.6E-92 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_9330 97d3d168214cbc3b60b9bc57f9cda0a8 579 PRINTS PR01165 Cytochrome c oxidase subunit I signature 74 97 1.6E-92 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_9330 97d3d168214cbc3b60b9bc57f9cda0a8 579 PRINTS PR01165 Cytochrome c oxidase subunit I signature 323 344 1.6E-92 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_9330 97d3d168214cbc3b60b9bc57f9cda0a8 579 PRINTS PR01165 Cytochrome c oxidase subunit I signature 27 52 1.6E-92 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_9330 97d3d168214cbc3b60b9bc57f9cda0a8 579 PRINTS PR01165 Cytochrome c oxidase subunit I signature 436 457 1.6E-92 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_9330 97d3d168214cbc3b60b9bc57f9cda0a8 579 PRINTS PR01165 Cytochrome c oxidase subunit I signature 386 405 1.6E-92 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_9330 97d3d168214cbc3b60b9bc57f9cda0a8 579 PRINTS PR01165 Cytochrome c oxidase subunit I signature 144 156 1.6E-92 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_9330 97d3d168214cbc3b60b9bc57f9cda0a8 579 PRINTS PR01165 Cytochrome c oxidase subunit I signature 255 276 1.6E-92 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_9330 97d3d168214cbc3b60b9bc57f9cda0a8 579 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 29 532 3.0E-209 T 14-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 AMIS_9330 97d3d168214cbc3b60b9bc57f9cda0a8 579 SUPERFAMILY SSF81442 25 535 2.62E-169 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_9330 97d3d168214cbc3b60b9bc57f9cda0a8 579 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 36 480 3.4E-148 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_9330 97d3d168214cbc3b60b9bc57f9cda0a8 579 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 257 311 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_9330 97d3d168214cbc3b60b9bc57f9cda0a8 579 Gene3D G3DSA:1.20.210.10 16 541 1.2E-200 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_55420 2fddfe6cd81e915459d9d4d561e8ff7d 447 SUPERFAMILY SSF52343 308 441 3.4E-25 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMIS_55420 2fddfe6cd81e915459d9d4d561e8ff7d 447 PRINTS PR00410 Phenol hydroxylase reductase family signature 411 419 8.1E-9 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AMIS_55420 2fddfe6cd81e915459d9d4d561e8ff7d 447 PRINTS PR00410 Phenol hydroxylase reductase family signature 312 321 8.1E-9 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AMIS_55420 2fddfe6cd81e915459d9d4d561e8ff7d 447 PRINTS PR00410 Phenol hydroxylase reductase family signature 328 347 8.1E-9 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AMIS_55420 2fddfe6cd81e915459d9d4d561e8ff7d 447 Gene3D G3DSA:3.40.50.80 323 446 6.6E-23 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMIS_55420 2fddfe6cd81e915459d9d4d561e8ff7d 447 Pfam PF01794 Ferric reductase like transmembrane component 58 177 3.9E-20 T 14-10-2018 IPR013130 Ferric reductase transmembrane component-like domain AMIS_55420 2fddfe6cd81e915459d9d4d561e8ff7d 447 Pfam PF00175 Oxidoreductase NAD-binding domain 329 424 1.1E-5 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AMIS_55420 2fddfe6cd81e915459d9d4d561e8ff7d 447 SUPERFAMILY SSF63380 220 317 7.35E-14 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AMIS_55420 2fddfe6cd81e915459d9d4d561e8ff7d 447 Pfam PF08022 FAD-binding domain 226 315 1.4E-5 T 14-10-2018 IPR013112 FAD-binding 8 GO:0016491|GO:0055114 AMIS_55420 2fddfe6cd81e915459d9d4d561e8ff7d 447 Gene3D G3DSA:2.40.30.10 218 316 2.8E-11 T 14-10-2018 AMIS_9680 4a9ae7cba7488b716eb401daf75ebf1f 565 Gene3D G3DSA:2.60.40.1220 43 141 1.1E-18 T 14-10-2018 AMIS_9680 4a9ae7cba7488b716eb401daf75ebf1f 565 Pfam PF05425 Copper resistance protein D 344 441 1.6E-17 T 14-10-2018 IPR008457 Copper resistance protein D GO:0016021 AMIS_9680 4a9ae7cba7488b716eb401daf75ebf1f 565 SUPERFAMILY SSF81296 42 137 1.33E-19 T 14-10-2018 IPR014756 Immunoglobulin E-set AMIS_9680 4a9ae7cba7488b716eb401daf75ebf1f 565 Pfam PF04234 CopC domain 43 136 2.4E-22 T 14-10-2018 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 AMIS_66210 542ff68e5b68102772cc75da24d5154c 239 PIRSF PIRSF006648 7 238 2.1E-18 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AMIS_66210 542ff68e5b68102772cc75da24d5154c 239 Pfam PF01061 ABC-2 type transporter 33 207 8.2E-15 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 AMIS_9190 0d120b5f1ea7a402201da339aa5d599c 601 SUPERFAMILY SSF55781 34 169 1.85E-23 T 14-10-2018 AMIS_9190 0d120b5f1ea7a402201da339aa5d599c 601 Pfam PF13185 GAF domain 34 166 1.3E-8 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_9190 0d120b5f1ea7a402201da339aa5d599c 601 Gene3D G3DSA:3.30.450.40 182 372 2.1E-18 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_9190 0d120b5f1ea7a402201da339aa5d599c 601 Gene3D G3DSA:3.30.450.40 20 181 1.5E-22 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_9190 0d120b5f1ea7a402201da339aa5d599c 601 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 414 600 2.2E-37 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_9190 0d120b5f1ea7a402201da339aa5d599c 601 SMART SM00065 33 183 1.0E-9 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_9190 0d120b5f1ea7a402201da339aa5d599c 601 SMART SM00065 207 368 3.1E-4 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_9190 0d120b5f1ea7a402201da339aa5d599c 601 Pfam PF01590 GAF domain 207 358 3.0E-5 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_9190 0d120b5f1ea7a402201da339aa5d599c 601 SMART SM00331 388 600 6.5E-31 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_9190 0d120b5f1ea7a402201da339aa5d599c 601 SUPERFAMILY SSF55781 190 375 4.36E-13 T 14-10-2018 AMIS_9190 0d120b5f1ea7a402201da339aa5d599c 601 SUPERFAMILY SSF81606 402 600 8.63E-7 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_9190 0d120b5f1ea7a402201da339aa5d599c 601 Gene3D G3DSA:3.60.40.10 380 600 1.6E-50 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_47050 83e2178b6440d2fce5a0bbd06191ceb7 132 SUPERFAMILY SSF89082 43 129 1.14E-13 T 14-10-2018 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain AMIS_47050 83e2178b6440d2fce5a0bbd06191ceb7 132 Pfam PF07739 TipAS antibiotic-recognition domain 27 127 4.7E-15 T 14-10-2018 IPR012925 TipAS antibiotic-recognition domain AMIS_47050 83e2178b6440d2fce5a0bbd06191ceb7 132 Gene3D G3DSA:1.10.490.50 36 131 4.3E-10 T 14-10-2018 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain AMIS_32330 248882c6a7a537aa93ee71322cf1e405 1475 Pfam PF00550 Phosphopantetheine attachment site 990 1052 3.8E-11 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain AMIS_32330 248882c6a7a537aa93ee71322cf1e405 1475 ProSitePatterns PS00455 Putative AMP-binding domain signature. 621 632 - T 14-10-2018 IPR020845 AMP-binding, conserved site AMIS_32330 248882c6a7a537aa93ee71322cf1e405 1475 Gene3D G3DSA:1.10.1200.10 977 1059 3.6E-23 T 14-10-2018 IPR036736 ACP-like superfamily AMIS_32330 248882c6a7a537aa93ee71322cf1e405 1475 SUPERFAMILY SSF52777 33 203 7.67E-29 T 14-10-2018 AMIS_32330 248882c6a7a537aa93ee71322cf1e405 1475 SUPERFAMILY SSF47336 981 1053 5.5E-17 T 14-10-2018 IPR036736 ACP-like superfamily AMIS_32330 248882c6a7a537aa93ee71322cf1e405 1475 Gene3D G3DSA:3.40.50.720 1070 1466 3.9E-102 T 14-10-2018 AMIS_32330 248882c6a7a537aa93ee71322cf1e405 1475 Pfam PF13193 AMP-binding enzyme C-terminal domain 886 962 1.5E-13 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AMIS_32330 248882c6a7a537aa93ee71322cf1e405 1475 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 501 902 1.9E-136 T 14-10-2018 IPR010071 Amino acid adenylation domain AMIS_32330 248882c6a7a537aa93ee71322cf1e405 1475 Pfam PF07993 Male sterility protein 1101 1337 4.0E-65 T 14-10-2018 IPR013120 Male sterility, NAD-binding Reactome: R-HSA-8848584 AMIS_32330 248882c6a7a537aa93ee71322cf1e405 1475 Gene3D G3DSA:3.40.50.12780 470 870 5.3E-144 T 14-10-2018 AMIS_32330 248882c6a7a537aa93ee71322cf1e405 1475 PIRSF PIRSF001617 212 592 7.0E-16 T 14-10-2018 AMIS_32330 248882c6a7a537aa93ee71322cf1e405 1475 PIRSF PIRSF001617 596 932 7.4E-27 T 14-10-2018 AMIS_32330 248882c6a7a537aa93ee71322cf1e405 1475 PIRSF PIRSF001617 924 1473 1.1E-81 T 14-10-2018 AMIS_32330 248882c6a7a537aa93ee71322cf1e405 1475 Gene3D G3DSA:3.30.559.10 32 390 1.4E-84 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AMIS_32330 248882c6a7a537aa93ee71322cf1e405 1475 Pfam PF00668 Condensation domain 33 458 5.1E-53 T 14-10-2018 IPR001242 Condensation domain AMIS_32330 248882c6a7a537aa93ee71322cf1e405 1475 Gene3D G3DSA:3.30.300.30 871 976 5.6E-35 T 14-10-2018 AMIS_32330 248882c6a7a537aa93ee71322cf1e405 1475 Pfam PF00501 AMP-binding enzyme 480 878 2.6E-106 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMIS_32330 248882c6a7a537aa93ee71322cf1e405 1475 SUPERFAMILY SSF51735 1095 1389 3.32E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_32330 248882c6a7a537aa93ee71322cf1e405 1475 TIGRFAM TIGR01746 Thioester-redct: thioester reductase domain 1099 1463 3.9E-117 T 14-10-2018 IPR010080 Thioester reductase-like domain AMIS_32330 248882c6a7a537aa93ee71322cf1e405 1475 SUPERFAMILY SSF52777 213 443 1.22E-38 T 14-10-2018 AMIS_32330 248882c6a7a537aa93ee71322cf1e405 1475 SMART SM00823 Phosphopantetheine attachment site 988 1057 0.0013 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AMIS_32330 248882c6a7a537aa93ee71322cf1e405 1475 Gene3D G3DSA:3.30.559.30 207 438 1.4E-84 T 14-10-2018 AMIS_32330 248882c6a7a537aa93ee71322cf1e405 1475 SUPERFAMILY SSF56801 452 1001 8.24E-165 T 14-10-2018 AMIS_80800 5529c7232d7be5e307a898c85be73b87 159 Pfam PF01967 MoaC family 18 151 3.0E-47 T 14-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMIS_80800 5529c7232d7be5e307a898c85be73b87 159 Gene3D G3DSA:3.30.70.640 5 159 9.3E-58 T 14-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMIS_80800 5529c7232d7be5e307a898c85be73b87 159 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 7 152 2.5E-55 T 14-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMIS_80800 5529c7232d7be5e307a898c85be73b87 159 SUPERFAMILY SSF55040 14 156 4.58E-50 T 14-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMIS_80800 5529c7232d7be5e307a898c85be73b87 159 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 5 159 32.347 T 14-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMIS_15230 386d36cbb83c2812329e23397a7f6678 368 Gene3D G3DSA:3.40.50.2000 9 355 1.2E-92 T 14-10-2018 AMIS_15230 386d36cbb83c2812329e23397a7f6678 368 Gene3D G3DSA:3.40.50.2000 170 351 1.2E-92 T 14-10-2018 AMIS_15230 386d36cbb83c2812329e23397a7f6678 368 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 198 356 3.1E-32 T 14-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 AMIS_15230 386d36cbb83c2812329e23397a7f6678 368 SUPERFAMILY SSF53756 7 366 3.73E-93 T 14-10-2018 AMIS_15230 386d36cbb83c2812329e23397a7f6678 368 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 8 367 30.199 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMIS_15230 386d36cbb83c2812329e23397a7f6678 368 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 2 360 1.5E-80 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMIS_15230 386d36cbb83c2812329e23397a7f6678 368 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 8 147 2.2E-33 T 14-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMIS_70340 7b0fa9dc2a52b550656cb6ba8b7e7884 358 SUPERFAMILY SSF51556 45 321 5.79E-54 T 14-10-2018 IPR032466 Metal-dependent hydrolase AMIS_70340 7b0fa9dc2a52b550656cb6ba8b7e7884 358 Pfam PF01979 Amidohydrolase family 162 349 2.0E-13 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AMIS_70340 7b0fa9dc2a52b550656cb6ba8b7e7884 358 Gene3D G3DSA:3.20.20.140 47 320 4.4E-47 T 14-10-2018 AMIS_70340 7b0fa9dc2a52b550656cb6ba8b7e7884 358 Gene3D G3DSA:2.30.40.10 31 356 4.4E-47 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMIS_27370 3648252af7b05596aa5851f3c2f8ad8f 383 Gene3D G3DSA:3.30.9.50 38 259 3.2E-61 T 14-10-2018 AMIS_27370 3648252af7b05596aa5851f3c2f8ad8f 383 SUPERFAMILY SSF51905 1 340 5.56E-51 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_27370 3648252af7b05596aa5851f3c2f8ad8f 383 Pfam PF01494 FAD binding domain 2 325 4.3E-18 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 AMIS_27370 3648252af7b05596aa5851f3c2f8ad8f 383 Gene3D G3DSA:3.50.50.60 5 330 3.2E-61 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_27370 3648252af7b05596aa5851f3c2f8ad8f 383 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 4.7E-18 T 14-10-2018 AMIS_27370 3648252af7b05596aa5851f3c2f8ad8f 383 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 137 152 4.7E-18 T 14-10-2018 AMIS_27370 3648252af7b05596aa5851f3c2f8ad8f 383 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 284 300 4.7E-18 T 14-10-2018 AMIS_27370 3648252af7b05596aa5851f3c2f8ad8f 383 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 269 284 4.7E-18 T 14-10-2018 AMIS_48160 5b9f27fde90bf2cece3d06202ab7294b 472 Gene3D G3DSA:3.30.70.270 305 472 2.5E-47 T 14-10-2018 AMIS_48160 5b9f27fde90bf2cece3d06202ab7294b 472 SMART SM00267 307 472 9.0E-45 T 14-10-2018 IPR000160 GGDEF domain AMIS_48160 5b9f27fde90bf2cece3d06202ab7294b 472 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 315 470 1.4E-33 T 14-10-2018 IPR000160 GGDEF domain AMIS_48160 5b9f27fde90bf2cece3d06202ab7294b 472 Pfam PF00990 Diguanylate cyclase, GGDEF domain 318 470 5.1E-37 T 14-10-2018 IPR000160 GGDEF domain AMIS_48160 5b9f27fde90bf2cece3d06202ab7294b 472 SUPERFAMILY SSF55073 323 470 4.84E-39 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_59290 3cbdd6cab7fb1ea7e5f34405e9c1994b 197 ProSitePatterns PS01081 TetR-type HTH domain signature. 38 69 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMIS_59290 3cbdd6cab7fb1ea7e5f34405e9c1994b 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 27 70 2.4E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_59290 3cbdd6cab7fb1ea7e5f34405e9c1994b 197 Gene3D G3DSA:1.10.357.10 65 197 5.0E-28 T 14-10-2018 AMIS_59290 3cbdd6cab7fb1ea7e5f34405e9c1994b 197 SUPERFAMILY SSF48498 84 195 4.82E-17 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_59290 3cbdd6cab7fb1ea7e5f34405e9c1994b 197 Gene3D G3DSA:1.10.10.60 16 63 3.9E-19 T 14-10-2018 AMIS_59290 3cbdd6cab7fb1ea7e5f34405e9c1994b 197 SUPERFAMILY SSF46689 17 77 4.99E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_59290 3cbdd6cab7fb1ea7e5f34405e9c1994b 197 Pfam PF16859 Bacterial transcriptional repressor C-terminal 83 190 4.4E-25 T 14-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AMIS_68500 b0c1493c229c78958d2c4a9f8035fe0b 216 Pfam PF12502 Protein of unknown function (DUF3710) 39 209 6.4E-59 T 14-10-2018 IPR022183 Protein of unknown function DUF3710 AMIS_23980 29192265bcc8fa46c20e8ed50e558fec 472 SUPERFAMILY SSF53383 33 434 2.21E-121 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_23980 29192265bcc8fa46c20e8ed50e558fec 472 Gene3D G3DSA:3.40.640.10 70 331 9.4E-167 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_23980 29192265bcc8fa46c20e8ed50e558fec 472 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 21 434 8.0E-188 T 14-10-2018 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 AMIS_23980 29192265bcc8fa46c20e8ed50e558fec 472 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 249 286 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMIS_23980 29192265bcc8fa46c20e8ed50e558fec 472 Gene3D G3DSA:3.90.1150.10 19 429 9.4E-167 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMIS_23980 29192265bcc8fa46c20e8ed50e558fec 472 Pfam PF00202 Aminotransferase class-III 33 433 2.8E-130 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMIS_23980 29192265bcc8fa46c20e8ed50e558fec 472 PIRSF PIRSF000521 134 436 1.2E-37 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMIS_23980 29192265bcc8fa46c20e8ed50e558fec 472 PIRSF PIRSF000521 1 142 1.3E-11 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMIS_53020 5dc55e4d4870e87be542f8488f06bcda 428 Pfam PF00175 Oxidoreductase NAD-binding domain 303 405 3.6E-9 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AMIS_53020 5dc55e4d4870e87be542f8488f06bcda 428 SUPERFAMILY SSF63380 192 290 3.4E-15 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AMIS_53020 5dc55e4d4870e87be542f8488f06bcda 428 Pfam PF01794 Ferric reductase like transmembrane component 30 149 5.0E-17 T 14-10-2018 IPR013130 Ferric reductase transmembrane component-like domain AMIS_53020 5dc55e4d4870e87be542f8488f06bcda 428 Gene3D G3DSA:2.40.30.10 193 291 3.3E-12 T 14-10-2018 AMIS_53020 5dc55e4d4870e87be542f8488f06bcda 428 Gene3D G3DSA:3.40.50.80 298 428 1.9E-23 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMIS_53020 5dc55e4d4870e87be542f8488f06bcda 428 SUPERFAMILY SSF52343 297 426 2.36E-26 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMIS_56720 7350d1a1a6032b76a413afeeebbf79d5 316 Gene3D G3DSA:3.40.50.970 1 169 1.4E-44 T 14-10-2018 AMIS_56720 7350d1a1a6032b76a413afeeebbf79d5 316 Gene3D G3DSA:3.40.50.920 180 307 4.1E-26 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AMIS_56720 7350d1a1a6032b76a413afeeebbf79d5 316 SUPERFAMILY SSF52922 182 305 2.09E-22 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AMIS_56720 7350d1a1a6032b76a413afeeebbf79d5 316 Pfam PF02779 Transketolase, pyrimidine binding domain 11 159 1.2E-22 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AMIS_56720 7350d1a1a6032b76a413afeeebbf79d5 316 SUPERFAMILY SSF52518 2 160 1.45E-39 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold AMIS_56720 7350d1a1a6032b76a413afeeebbf79d5 316 SMART SM00861 1 163 2.8E-25 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AMIS_56720 7350d1a1a6032b76a413afeeebbf79d5 316 Pfam PF02780 Transketolase, C-terminal domain 183 297 2.6E-19 T 14-10-2018 IPR033248 Transketolase, C-terminal domain AMIS_64640 89ca66c7d8eaa6ac7f96f56d17c1d464 262 SUPERFAMILY SSF53335 13 244 1.11E-25 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_64640 89ca66c7d8eaa6ac7f96f56d17c1d464 262 Pfam PF13649 Methyltransferase domain 54 154 7.6E-12 T 14-10-2018 AMIS_64640 89ca66c7d8eaa6ac7f96f56d17c1d464 262 Gene3D G3DSA:3.40.50.150 9 256 1.4E-27 T 14-10-2018 AMIS_16070 410b309725b88e04fe523e6e92e14b9d 304 PIRSF PIRSF005052 21 304 1.5E-102 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 AMIS_16070 410b309725b88e04fe523e6e92e14b9d 304 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 21 303 39.948 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 AMIS_16070 410b309725b88e04fe523e6e92e14b9d 304 Pfam PF03668 P-loop ATPase protein family 22 304 1.4E-102 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 AMIS_16070 410b309725b88e04fe523e6e92e14b9d 304 Gene3D G3DSA:3.40.50.300 22 178 1.7E-8 T 14-10-2018 AMIS_16070 410b309725b88e04fe523e6e92e14b9d 304 SUPERFAMILY SSF52540 24 173 2.15E-16 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_28510 41800a1cc53ea5ce4e25f0ee11038bde 228 SMART SM00382 39 226 5.4E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_28510 41800a1cc53ea5ce4e25f0ee11038bde 228 Gene3D G3DSA:3.40.50.300 11 228 3.3E-62 T 14-10-2018 AMIS_28510 41800a1cc53ea5ce4e25f0ee11038bde 228 SUPERFAMILY SSF52540 13 226 2.66E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_28510 41800a1cc53ea5ce4e25f0ee11038bde 228 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_28510 41800a1cc53ea5ce4e25f0ee11038bde 228 Pfam PF00005 ABC transporter 30 177 1.3E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_53310 0f436b26c1ba0cf43c0faa6eceee8b84 421 Gene3D G3DSA:3.40.50.410 38 219 4.0E-119 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMIS_53310 0f436b26c1ba0cf43c0faa6eceee8b84 421 Gene3D G3DSA:2.60.40.3670 3 315 4.0E-119 T 14-10-2018 AMIS_53310 0f436b26c1ba0cf43c0faa6eceee8b84 421 SMART SM00327 39 212 4.5E-7 T 14-10-2018 IPR002035 von Willebrand factor, type A AMIS_53310 0f436b26c1ba0cf43c0faa6eceee8b84 421 Gene3D G3DSA:1.20.120.1690 317 420 5.0E-41 T 14-10-2018 AMIS_53310 0f436b26c1ba0cf43c0faa6eceee8b84 421 SUPERFAMILY SSF53300 43 215 1.05E-20 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMIS_53310 0f436b26c1ba0cf43c0faa6eceee8b84 421 Pfam PF13768 von Willebrand factor type A domain 43 197 9.1E-14 T 14-10-2018 IPR002035 von Willebrand factor, type A AMIS_42440 541ea0dcbb9c861a5ea584073a87c92e 296 SUPERFAMILY SSF48239 38 272 1.94E-10 T 14-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid AMIS_42440 541ea0dcbb9c861a5ea584073a87c92e 296 Gene3D G3DSA:1.50.10.20 25 185 3.9E-6 T 14-10-2018 AMIS_48250 c670f38b63509606b8320869daa09d16 1213 Pfam PF03176 MMPL family 446 689 2.3E-23 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 AMIS_48250 c670f38b63509606b8320869daa09d16 1213 Pfam PF03176 MMPL family 44 362 1.2E-44 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 AMIS_48250 c670f38b63509606b8320869daa09d16 1213 SUPERFAMILY SSF82866 142 332 2.88E-26 T 14-10-2018 AMIS_48250 c670f38b63509606b8320869daa09d16 1213 SUPERFAMILY SSF82866 460 686 8.89E-26 T 14-10-2018 AMIS_17560 081649bb1f4c85d42bf90b819d5cdd61 332 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 174 9.0E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_17560 081649bb1f4c85d42bf90b819d5cdd61 332 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 227 9.0E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_17560 081649bb1f4c85d42bf90b819d5cdd61 332 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 293 313 9.0E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_17560 081649bb1f4c85d42bf90b819d5cdd61 332 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 95 112 9.0E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_17560 081649bb1f4c85d42bf90b819d5cdd61 332 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 237 256 9.0E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_17560 081649bb1f4c85d42bf90b819d5cdd61 332 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 258 275 9.0E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_17560 081649bb1f4c85d42bf90b819d5cdd61 332 SUPERFAMILY SSF51735 90 331 1.37E-63 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_17560 081649bb1f4c85d42bf90b819d5cdd61 332 Pfam PF00106 short chain dehydrogenase 94 277 1.7E-51 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_17560 081649bb1f4c85d42bf90b819d5cdd61 332 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 224 252 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMIS_17560 081649bb1f4c85d42bf90b819d5cdd61 332 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 217 225 3.2E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_17560 081649bb1f4c85d42bf90b819d5cdd61 332 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 237 256 3.2E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_17560 081649bb1f4c85d42bf90b819d5cdd61 332 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 174 3.2E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_17560 081649bb1f4c85d42bf90b819d5cdd61 332 Gene3D G3DSA:3.40.50.720 82 332 1.0E-67 T 14-10-2018 AMIS_3240 622b443ee76860132604ef7226592f90 118 Gene3D G3DSA:3.30.750.24 2 113 1.2E-33 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_3240 622b443ee76860132604ef7226592f90 118 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 1 106 1.4E-27 T 14-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 AMIS_3240 622b443ee76860132604ef7226592f90 118 Pfam PF01740 STAS domain 11 108 5.5E-18 T 14-10-2018 IPR002645 STAS domain AMIS_3240 622b443ee76860132604ef7226592f90 118 SUPERFAMILY SSF52091 8 110 2.75E-27 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_79520 3b38c0fb8f2fb95c42a4e3bc4752b9fc 316 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_79520 3b38c0fb8f2fb95c42a4e3bc4752b9fc 316 Pfam PF00005 ABC transporter 30 168 7.5E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_79520 3b38c0fb8f2fb95c42a4e3bc4752b9fc 316 SMART SM00382 38 216 6.8E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_79520 3b38c0fb8f2fb95c42a4e3bc4752b9fc 316 SUPERFAMILY SSF52540 13 241 1.21E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_79520 3b38c0fb8f2fb95c42a4e3bc4752b9fc 316 Gene3D G3DSA:3.40.50.300 10 282 2.1E-59 T 14-10-2018 AMIS_75030 d5dce7ade48f8b823f9f12a55949914a 484 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 413 441 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AMIS_75030 d5dce7ade48f8b823f9f12a55949914a 484 Gene3D G3DSA:3.90.550.10 3 262 1.1E-67 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_75030 d5dce7ade48f8b823f9f12a55949914a 484 SUPERFAMILY SSF53448 12 262 5.85E-59 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_75030 d5dce7ade48f8b823f9f12a55949914a 484 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 10 462 38.572 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 AMIS_75030 d5dce7ade48f8b823f9f12a55949914a 484 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 405 438 3.4E-5 T 14-10-2018 IPR001451 Hexapeptide repeat AMIS_75030 d5dce7ade48f8b823f9f12a55949914a 484 SUPERFAMILY SSF51161 259 467 2.56E-37 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily AMIS_75030 d5dce7ade48f8b823f9f12a55949914a 484 Gene3D G3DSA:2.160.10.10 263 448 3.3E-44 T 14-10-2018 AMIS_75030 d5dce7ade48f8b823f9f12a55949914a 484 Pfam PF12804 MobA-like NTP transferase domain 13 147 1.5E-22 T 14-10-2018 IPR025877 MobA-like NTP transferase AMIS_75030 d5dce7ade48f8b823f9f12a55949914a 484 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 12 463 3.8E-159 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 AMIS_22610 7d98e7b7269786499a704939d91ae7c2 137 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 129 1.9E-12 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMIS_22610 7d98e7b7269786499a704939d91ae7c2 137 SUPERFAMILY SSF54593 5 134 3.62E-22 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_22610 7d98e7b7269786499a704939d91ae7c2 137 Gene3D G3DSA:3.10.180.10 2 135 1.3E-43 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_66290 2be3421a0372d4e2b52f05991dc3aba9 908 Gene3D G3DSA:3.30.450.20 339 464 1.3E-19 T 14-10-2018 AMIS_66290 2be3421a0372d4e2b52f05991dc3aba9 908 Pfam PF08448 PAS fold 349 456 8.7E-11 T 14-10-2018 IPR013656 PAS fold-4 AMIS_66290 2be3421a0372d4e2b52f05991dc3aba9 908 SMART SM00267 456 640 4.5E-50 T 14-10-2018 IPR000160 GGDEF domain AMIS_66290 2be3421a0372d4e2b52f05991dc3aba9 908 Pfam PF00990 Diguanylate cyclase, GGDEF domain 467 589 1.3E-33 T 14-10-2018 IPR000160 GGDEF domain AMIS_66290 2be3421a0372d4e2b52f05991dc3aba9 908 Pfam PF00563 EAL domain 656 892 4.0E-73 T 14-10-2018 IPR001633 EAL domain AMIS_66290 2be3421a0372d4e2b52f05991dc3aba9 908 SMART SM00052 650 897 2.0E-122 T 14-10-2018 IPR001633 EAL domain AMIS_66290 2be3421a0372d4e2b52f05991dc3aba9 908 SUPERFAMILY SSF55073 472 641 5.73E-36 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_66290 2be3421a0372d4e2b52f05991dc3aba9 908 Gene3D G3DSA:3.30.70.270 465 652 6.3E-50 T 14-10-2018 AMIS_66290 2be3421a0372d4e2b52f05991dc3aba9 908 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 339 463 8.6E-18 T 14-10-2018 IPR000014 PAS domain AMIS_66290 2be3421a0372d4e2b52f05991dc3aba9 908 SUPERFAMILY SSF55785 334 454 1.06E-18 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_66290 2be3421a0372d4e2b52f05991dc3aba9 908 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 465 589 1.8E-27 T 14-10-2018 IPR000160 GGDEF domain AMIS_66290 2be3421a0372d4e2b52f05991dc3aba9 908 Gene3D G3DSA:3.20.20.450 653 905 4.0E-105 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_66290 2be3421a0372d4e2b52f05991dc3aba9 908 SUPERFAMILY SSF141868 655 903 3.92E-92 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_66290 2be3421a0372d4e2b52f05991dc3aba9 908 SMART SM00091 342 408 5.5E-7 T 14-10-2018 IPR000014 PAS domain AMIS_10200 820b8b318361f8998da1861ec6b47978 486 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 310 450 2.6E-23 T 14-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 AMIS_10200 820b8b318361f8998da1861ec6b47978 486 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 133 301 5.9E-56 T 14-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 AMIS_10200 820b8b318361f8998da1861ec6b47978 486 SUPERFAMILY SSF55545 15 132 1.31E-19 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 AMIS_10200 820b8b318361f8998da1861ec6b47978 486 Gene3D G3DSA:3.30.379.10 15 124 6.2E-26 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 AMIS_10200 820b8b318361f8998da1861ec6b47978 486 SUPERFAMILY SSF51445 133 480 1.86E-104 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_10200 820b8b318361f8998da1861ec6b47978 486 Gene3D G3DSA:3.20.20.80 125 483 3.7E-130 T 14-10-2018 AMIS_10200 820b8b318361f8998da1861ec6b47978 486 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 19 130 3.2E-17 T 14-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal AMIS_10200 820b8b318361f8998da1861ec6b47978 486 PRINTS PR00738 Glycosyl hydrolase family 20 signature 156 177 1.1E-34 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AMIS_10200 820b8b318361f8998da1861ec6b47978 486 PRINTS PR00738 Glycosyl hydrolase family 20 signature 287 300 1.1E-34 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AMIS_10200 820b8b318361f8998da1861ec6b47978 486 PRINTS PR00738 Glycosyl hydrolase family 20 signature 98 118 1.1E-34 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AMIS_10200 820b8b318361f8998da1861ec6b47978 486 PRINTS PR00738 Glycosyl hydrolase family 20 signature 217 234 1.1E-34 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AMIS_10200 820b8b318361f8998da1861ec6b47978 486 PRINTS PR00738 Glycosyl hydrolase family 20 signature 432 449 1.1E-34 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AMIS_10200 820b8b318361f8998da1861ec6b47978 486 PRINTS PR00738 Glycosyl hydrolase family 20 signature 414 430 1.1E-34 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AMIS_10200 820b8b318361f8998da1861ec6b47978 486 PRINTS PR00738 Glycosyl hydrolase family 20 signature 265 283 1.1E-34 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AMIS_39240 b3f8b18c2fc441281762bf116991839d 1233 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 460 567 2.5E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_39240 b3f8b18c2fc441281762bf116991839d 1233 SUPERFAMILY SSF52172 611 744 1.85E-40 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_39240 b3f8b18c2fc441281762bf116991839d 1233 SUPERFAMILY SSF47384 332 413 4.9E-16 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_39240 b3f8b18c2fc441281762bf116991839d 1233 Pfam PF00512 His Kinase A (phospho-acceptor) domain 346 413 1.6E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_39240 b3f8b18c2fc441281762bf116991839d 1233 SUPERFAMILY SSF55874 1139 1225 9.82E-7 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_39240 b3f8b18c2fc441281762bf116991839d 1233 Gene3D G3DSA:3.30.565.10 1108 1232 3.4E-21 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_39240 b3f8b18c2fc441281762bf116991839d 1233 SMART SM00387 459 570 1.2E-35 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_39240 b3f8b18c2fc441281762bf116991839d 1233 Gene3D G3DSA:3.60.40.10 853 1098 8.4E-54 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_39240 b3f8b18c2fc441281762bf116991839d 1233 Pfam PF08448 PAS fold 54 157 2.9E-5 T 14-10-2018 IPR013656 PAS fold-4 AMIS_39240 b3f8b18c2fc441281762bf116991839d 1233 PRINTS PR00344 Bacterial sensor protein C-terminal signature 554 567 1.7E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_39240 b3f8b18c2fc441281762bf116991839d 1233 PRINTS PR00344 Bacterial sensor protein C-terminal signature 495 509 1.7E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_39240 b3f8b18c2fc441281762bf116991839d 1233 PRINTS PR00344 Bacterial sensor protein C-terminal signature 530 548 1.7E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_39240 b3f8b18c2fc441281762bf116991839d 1233 PRINTS PR00344 Bacterial sensor protein C-terminal signature 513 523 1.7E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_39240 b3f8b18c2fc441281762bf116991839d 1233 Gene3D G3DSA:3.30.450.20 36 166 4.8E-17 T 14-10-2018 AMIS_39240 b3f8b18c2fc441281762bf116991839d 1233 Gene3D G3DSA:3.40.50.12740 615 820 1.2E-47 T 14-10-2018 AMIS_39240 b3f8b18c2fc441281762bf116991839d 1233 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 912 1097 2.4E-39 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_39240 b3f8b18c2fc441281762bf116991839d 1233 Gene3D G3DSA:3.30.450.40 177 335 4.9E-8 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_39240 b3f8b18c2fc441281762bf116991839d 1233 SUPERFAMILY SSF81606 898 1096 5.23E-7 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_39240 b3f8b18c2fc441281762bf116991839d 1233 Gene3D G3DSA:3.30.565.10 419 571 3.9E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_39240 b3f8b18c2fc441281762bf116991839d 1233 SMART SM00388 345 413 2.0E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_39240 b3f8b18c2fc441281762bf116991839d 1233 SUPERFAMILY SSF55781 193 336 3.36E-10 T 14-10-2018 AMIS_39240 b3f8b18c2fc441281762bf116991839d 1233 SMART SM00448 615 728 8.0E-43 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_39240 b3f8b18c2fc441281762bf116991839d 1233 Pfam PF00072 Response regulator receiver domain 617 729 7.5E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_39240 b3f8b18c2fc441281762bf116991839d 1233 SUPERFAMILY SSF55874 402 570 2.62E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_39240 b3f8b18c2fc441281762bf116991839d 1233 Pfam PF13581 Histidine kinase-like ATPase domain 1120 1212 5.9E-11 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_39240 b3f8b18c2fc441281762bf116991839d 1233 SMART SM00331 884 1096 1.8E-24 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_39240 b3f8b18c2fc441281762bf116991839d 1233 Gene3D G3DSA:1.10.287.130 336 414 7.3E-18 T 14-10-2018 AMIS_15610 c3a7897687c39d784fc8ddbc7ccaab15 121 Gene3D G3DSA:3.10.20.400 5 104 1.2E-39 T 14-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 AMIS_15610 c3a7897687c39d784fc8ddbc7ccaab15 121 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 63 116 6.0E-17 T 14-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 AMIS_15610 c3a7897687c39d784fc8ddbc7ccaab15 121 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 14 117 31.49 T 14-10-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 AMIS_15610 c3a7897687c39d784fc8ddbc7ccaab15 121 SUPERFAMILY SSF141734 13 117 3.66E-46 T 14-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 AMIS_15610 c3a7897687c39d784fc8ddbc7ccaab15 121 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 40 113 5.0E-34 T 14-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 AMIS_29760 87df87592b707177634d65847f770733 551 SUPERFAMILY SSF53850 22 549 5.43E-81 T 14-10-2018 AMIS_29760 87df87592b707177634d65847f770733 551 Gene3D G3DSA:3.40.190.10 65 449 2.0E-112 T 14-10-2018 AMIS_29760 87df87592b707177634d65847f770733 551 Gene3D G3DSA:3.40.190.10 170 548 2.0E-112 T 14-10-2018 AMIS_29760 87df87592b707177634d65847f770733 551 Pfam PF01547 Bacterial extracellular solute-binding protein 68 387 3.2E-16 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein AMIS_61810 23e506ee30cd6225fb5ea2b052b05885 826 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 818 39.469 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AMIS_61810 23e506ee30cd6225fb5ea2b052b05885 826 SMART SM00896 731 824 3.5E-35 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 AMIS_61810 23e506ee30cd6225fb5ea2b052b05885 826 SMART SM00874 407 475 3.2E-22 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 AMIS_61810 23e506ee30cd6225fb5ea2b052b05885 826 Pfam PF03147 Ferredoxin-fold anticodon binding domain 731 824 1.3E-22 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 AMIS_61810 23e506ee30cd6225fb5ea2b052b05885 826 SUPERFAMILY SSF50249 42 195 2.4E-32 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMIS_61810 23e506ee30cd6225fb5ea2b052b05885 826 Gene3D G3DSA:3.30.930.10 490 720 9.7E-57 T 14-10-2018 AMIS_61810 23e506ee30cd6225fb5ea2b052b05885 826 Pfam PF03484 tRNA synthetase B5 domain 412 475 2.5E-17 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 AMIS_61810 23e506ee30cd6225fb5ea2b052b05885 826 Pfam PF03483 B3/4 domain 218 390 6.6E-69 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AMIS_61810 23e506ee30cd6225fb5ea2b052b05885 826 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 824 1.5E-189 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AMIS_61810 23e506ee30cd6225fb5ea2b052b05885 826 SUPERFAMILY SSF56037 206 403 5.49E-69 T 14-10-2018 AMIS_61810 23e506ee30cd6225fb5ea2b052b05885 826 SMART SM00873 218 391 8.1E-84 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AMIS_61810 23e506ee30cd6225fb5ea2b052b05885 826 Pfam PF01588 Putative tRNA binding domain 48 146 1.6E-18 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 AMIS_61810 23e506ee30cd6225fb5ea2b052b05885 826 SUPERFAMILY SSF54991 727 824 3.53E-24 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 AMIS_61810 23e506ee30cd6225fb5ea2b052b05885 826 Gene3D G3DSA:2.40.50.140 41 159 1.5E-56 T 14-10-2018 AMIS_61810 23e506ee30cd6225fb5ea2b052b05885 826 Gene3D G3DSA:3.30.56.10 7 185 1.5E-56 T 14-10-2018 AMIS_61810 23e506ee30cd6225fb5ea2b052b05885 826 SUPERFAMILY SSF55681 471 719 1.29E-41 T 14-10-2018 AMIS_61810 23e506ee30cd6225fb5ea2b052b05885 826 Gene3D G3DSA:3.50.40.10 205 400 4.3E-77 T 14-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 AMIS_61810 23e506ee30cd6225fb5ea2b052b05885 826 Gene3D G3DSA:3.30.56.10 407 479 9.3E-19 T 14-10-2018 AMIS_61810 23e506ee30cd6225fb5ea2b052b05885 826 SUPERFAMILY SSF46955 408 479 7.14E-17 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily AMIS_61810 23e506ee30cd6225fb5ea2b052b05885 826 Gene3D G3DSA:3.30.70.380 732 824 2.6E-24 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 AMIS_54350 ff22e6baa7fee7396967200148abaa90 775 Pfam PF00990 Diguanylate cyclase, GGDEF domain 324 481 1.0E-31 T 14-10-2018 IPR000160 GGDEF domain AMIS_54350 ff22e6baa7fee7396967200148abaa90 775 Pfam PF00563 EAL domain 505 739 5.6E-64 T 14-10-2018 IPR001633 EAL domain AMIS_54350 ff22e6baa7fee7396967200148abaa90 775 SUPERFAMILY SSF141868 505 753 8.63E-79 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_54350 ff22e6baa7fee7396967200148abaa90 775 SMART SM00267 313 488 1.2E-40 T 14-10-2018 IPR000160 GGDEF domain AMIS_54350 ff22e6baa7fee7396967200148abaa90 775 SUPERFAMILY SSF55073 329 489 1.49E-34 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_54350 ff22e6baa7fee7396967200148abaa90 775 Gene3D G3DSA:3.20.20.450 502 760 9.5E-89 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_54350 ff22e6baa7fee7396967200148abaa90 775 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 321 486 3.8E-31 T 14-10-2018 IPR000160 GGDEF domain AMIS_54350 ff22e6baa7fee7396967200148abaa90 775 Gene3D G3DSA:3.30.70.270 319 501 1.8E-45 T 14-10-2018 AMIS_54350 ff22e6baa7fee7396967200148abaa90 775 SMART SM00052 498 746 1.1E-98 T 14-10-2018 IPR001633 EAL domain AMIS_58770 656f76c18e3d50a9d9de78f1d3381d37 3632 SUPERFAMILY SSF56801 6 541 4.45E-106 T 14-10-2018 AMIS_58770 656f76c18e3d50a9d9de78f1d3381d37 3632 Gene3D G3DSA:1.10.1200.10 1727 1810 1.2E-18 T 14-10-2018 IPR036736 ACP-like superfamily AMIS_58770 656f76c18e3d50a9d9de78f1d3381d37 3632 SUPERFAMILY SSF56801 2248 2798 5.63E-134 T 14-10-2018 AMIS_58770 656f76c18e3d50a9d9de78f1d3381d37 3632 SUPERFAMILY SSF47336 602 717 5.76E-18 T 14-10-2018 IPR036736 ACP-like superfamily AMIS_58770 656f76c18e3d50a9d9de78f1d3381d37 3632 SUPERFAMILY SSF52777 2896 3057 3.56E-35 T 14-10-2018 AMIS_58770 656f76c18e3d50a9d9de78f1d3381d37 3632 Gene3D G3DSA:3.30.559.30 1987 2224 2.3E-39 T 14-10-2018 AMIS_58770 656f76c18e3d50a9d9de78f1d3381d37 3632 SUPERFAMILY SSF47336 1735 1813 6.54E-17 T 14-10-2018 IPR036736 ACP-like superfamily AMIS_58770 656f76c18e3d50a9d9de78f1d3381d37 3632 Gene3D G3DSA:1.10.1200.10 590 678 7.7E-14 T 14-10-2018 IPR036736 ACP-like superfamily AMIS_58770 656f76c18e3d50a9d9de78f1d3381d37 3632 Gene3D G3DSA:3.30.300.30 434 538 4.2E-13 T 14-10-2018 AMIS_58770 656f76c18e3d50a9d9de78f1d3381d37 3632 Gene3D G3DSA:1.10.1200.10 2775 2877 9.4E-17 T 14-10-2018 IPR036736 ACP-like superfamily AMIS_58770 656f76c18e3d50a9d9de78f1d3381d37 3632 SUPERFAMILY SSF47336 2779 2887 1.73E-7 T 14-10-2018 IPR036736 ACP-like superfamily AMIS_58770 656f76c18e3d50a9d9de78f1d3381d37 3632 SUPERFAMILY SSF52777 3090 3239 2.11E-7 T 14-10-2018 AMIS_58770 656f76c18e3d50a9d9de78f1d3381d37 3632 Gene3D G3DSA:3.30.70.3290 1255 1334 7.5E-10 T 14-10-2018 AMIS_58770 656f76c18e3d50a9d9de78f1d3381d37 3632 SMART SM00825 Beta-ketoacyl synthase 707 1105 2.0E-128 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMIS_58770 656f76c18e3d50a9d9de78f1d3381d37 3632 Gene3D G3DSA:3.40.50.720 3363 3502 1.8E-7 T 14-10-2018 AMIS_58770 656f76c18e3d50a9d9de78f1d3381d37 3632 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2277 2704 3.7E-115 T 14-10-2018 IPR010071 Amino acid adenylation domain AMIS_58770 656f76c18e3d50a9d9de78f1d3381d37 3632 Gene3D G3DSA:3.40.47.10 697 1127 5.9E-146 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_58770 656f76c18e3d50a9d9de78f1d3381d37 3632 SUPERFAMILY SSF52777 1983 2213 1.45E-38 T 14-10-2018 AMIS_58770 656f76c18e3d50a9d9de78f1d3381d37 3632 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 706 932 4.7E-63 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AMIS_58770 656f76c18e3d50a9d9de78f1d3381d37 3632 SUPERFAMILY SSF53901 704 1101 1.03E-72 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_58770 656f76c18e3d50a9d9de78f1d3381d37 3632 SMART SM00823 Phosphopantetheine attachment site 2785 2872 0.11 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AMIS_58770 656f76c18e3d50a9d9de78f1d3381d37 3632 SMART SM00823 Phosphopantetheine attachment site 1740 1811 1.2E-14 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AMIS_58770 656f76c18e3d50a9d9de78f1d3381d37 3632 SMART SM00823 Phosphopantetheine attachment site 607 678 4.1E-5 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AMIS_58770 656f76c18e3d50a9d9de78f1d3381d37 3632 Pfam PF08659 KR domain 1477 1663 8.2E-26 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AMIS_58770 656f76c18e3d50a9d9de78f1d3381d37 3632 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 940 1055 1.2E-33 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal AMIS_58770 656f76c18e3d50a9d9de78f1d3381d37 3632 Pfam PF00501 AMP-binding enzyme 18 437 1.2E-69 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMIS_58770 656f76c18e3d50a9d9de78f1d3381d37 3632 Pfam PF00501 AMP-binding enzyme 2257 2679 2.2E-88 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMIS_58770 656f76c18e3d50a9d9de78f1d3381d37 3632 Gene3D G3DSA:3.40.50.12780 2248 2672 2.2E-114 T 14-10-2018 AMIS_58770 656f76c18e3d50a9d9de78f1d3381d37 3632 Pfam PF00550 Phosphopantetheine attachment site 610 674 4.8E-11 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain AMIS_58770 656f76c18e3d50a9d9de78f1d3381d37 3632 Pfam PF00550 Phosphopantetheine attachment site 1742 1807 2.6E-14 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain AMIS_58770 656f76c18e3d50a9d9de78f1d3381d37 3632 Pfam PF00550 Phosphopantetheine attachment site 2787 2829 1.2E-5 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain AMIS_58770 656f76c18e3d50a9d9de78f1d3381d37 3632 SUPERFAMILY SSF51735 1279 1467 3.04E-9 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_58770 656f76c18e3d50a9d9de78f1d3381d37 3632 SMART SM01294 1741 1807 2.0E-7 T 14-10-2018 AMIS_58770 656f76c18e3d50a9d9de78f1d3381d37 3632 Pfam PF13193 AMP-binding enzyme C-terminal domain 2688 2756 2.7E-9 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AMIS_58770 656f76c18e3d50a9d9de78f1d3381d37 3632 Gene3D G3DSA:3.30.300.30 2675 2762 2.5E-22 T 14-10-2018 AMIS_58770 656f76c18e3d50a9d9de78f1d3381d37 3632 Pfam PF00668 Condensation domain 1813 2204 8.1E-33 T 14-10-2018 IPR001242 Condensation domain AMIS_58770 656f76c18e3d50a9d9de78f1d3381d37 3632 Pfam PF00668 Condensation domain 2899 3058 3.0E-20 T 14-10-2018 IPR001242 Condensation domain AMIS_58770 656f76c18e3d50a9d9de78f1d3381d37 3632 SUPERFAMILY SSF51735 1475 1671 1.47E-24 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_58770 656f76c18e3d50a9d9de78f1d3381d37 3632 ProSitePatterns PS00012 Phosphopantetheine attachment site. 633 648 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site AMIS_58770 656f76c18e3d50a9d9de78f1d3381d37 3632 Gene3D G3DSA:3.40.50.720 1347 1708 5.0E-55 T 14-10-2018 AMIS_58770 656f76c18e3d50a9d9de78f1d3381d37 3632 Gene3D G3DSA:3.30.559.10 2894 3062 1.8E-37 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AMIS_58770 656f76c18e3d50a9d9de78f1d3381d37 3632 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 1059 1185 4.6E-18 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AMIS_58770 656f76c18e3d50a9d9de78f1d3381d37 3632 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1766 1781 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site AMIS_58770 656f76c18e3d50a9d9de78f1d3381d37 3632 SUPERFAMILY SSF52777 1811 1995 1.78E-24 T 14-10-2018 AMIS_58770 656f76c18e3d50a9d9de78f1d3381d37 3632 Gene3D G3DSA:3.30.70.3290 1134 1254 4.1E-10 T 14-10-2018 AMIS_58770 656f76c18e3d50a9d9de78f1d3381d37 3632 Gene3D G3DSA:3.30.559.10 1811 1986 5.1E-21 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AMIS_58770 656f76c18e3d50a9d9de78f1d3381d37 3632 Gene3D G3DSA:3.40.50.12780 4 432 1.1E-119 T 14-10-2018 AMIS_58770 656f76c18e3d50a9d9de78f1d3381d37 3632 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2421 2432 - T 14-10-2018 IPR020845 AMP-binding, conserved site AMIS_58770 656f76c18e3d50a9d9de78f1d3381d37 3632 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1477 1665 9.1E-15 T 14-10-2018 AMIS_58770 656f76c18e3d50a9d9de78f1d3381d37 3632 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 847 863 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site AMIS_58770 656f76c18e3d50a9d9de78f1d3381d37 3632 ProSitePatterns PS00455 Putative AMP-binding domain signature. 150 161 - T 14-10-2018 IPR020845 AMP-binding, conserved site AMIS_58770 656f76c18e3d50a9d9de78f1d3381d37 3632 SUPERFAMILY SSF51735 3366 3492 4.71E-9 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_71920 b4ac57710b05da7c6d4e2bc165c82385 481 SMART SM00382 159 422 5.0E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_71920 b4ac57710b05da7c6d4e2bc165c82385 481 Gene3D G3DSA:1.10.1140.10 363 481 5.3E-51 T 14-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMIS_71920 b4ac57710b05da7c6d4e2bc165c82385 481 Hamap MF_01347 ATP synthase subunit beta [atpB]. 13 478 54.435 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 AMIS_71920 b4ac57710b05da7c6d4e2bc165c82385 481 SUPERFAMILY SSF50615 11 91 3.14E-25 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMIS_71920 b4ac57710b05da7c6d4e2bc165c82385 481 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 18 89 3.7E-21 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMIS_71920 b4ac57710b05da7c6d4e2bc165c82385 481 Gene3D G3DSA:2.40.10.170 14 91 2.6E-29 T 14-10-2018 AMIS_71920 b4ac57710b05da7c6d4e2bc165c82385 481 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 147 360 2.7E-63 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMIS_71920 b4ac57710b05da7c6d4e2bc165c82385 481 SUPERFAMILY SSF52540 93 363 4.51E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_71920 b4ac57710b05da7c6d4e2bc165c82385 481 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 351 360 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMIS_71920 b4ac57710b05da7c6d4e2bc165c82385 481 SUPERFAMILY SSF47917 363 478 2.88E-48 T 14-10-2018 AMIS_71920 b4ac57710b05da7c6d4e2bc165c82385 481 Gene3D G3DSA:3.40.50.300 92 362 3.8E-100 T 14-10-2018 AMIS_71920 b4ac57710b05da7c6d4e2bc165c82385 481 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 15 478 5.1E-240 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 AMIS_65380 a432989dc27133224b321ab5836df4cd 422 Gene3D G3DSA:2.130.10.30 279 422 3.7E-33 T 14-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II AMIS_65380 a432989dc27133224b321ab5836df4cd 422 SUPERFAMILY SSF50985 78 371 6.08E-74 T 14-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II AMIS_65380 a432989dc27133224b321ab5836df4cd 422 PRINTS PR00633 Chromosome condensation regulator RCC1 signature 76 89 2.8E-12 T 14-10-2018 IPR000408 Regulator of chromosome condensation, RCC1 AMIS_65380 a432989dc27133224b321ab5836df4cd 422 PRINTS PR00633 Chromosome condensation regulator RCC1 signature 178 194 2.8E-12 T 14-10-2018 IPR000408 Regulator of chromosome condensation, RCC1 AMIS_65380 a432989dc27133224b321ab5836df4cd 422 PRINTS PR00633 Chromosome condensation regulator RCC1 signature 337 358 2.8E-12 T 14-10-2018 IPR000408 Regulator of chromosome condensation, RCC1 AMIS_65380 a432989dc27133224b321ab5836df4cd 422 PRINTS PR00633 Chromosome condensation regulator RCC1 signature 95 111 2.8E-12 T 14-10-2018 IPR000408 Regulator of chromosome condensation, RCC1 AMIS_65380 a432989dc27133224b321ab5836df4cd 422 PRINTS PR00633 Chromosome condensation regulator RCC1 signature 194 208 2.8E-12 T 14-10-2018 IPR000408 Regulator of chromosome condensation, RCC1 AMIS_65380 a432989dc27133224b321ab5836df4cd 422 PRINTS PR00633 Chromosome condensation regulator RCC1 signature 282 300 2.8E-12 T 14-10-2018 IPR000408 Regulator of chromosome condensation, RCC1 AMIS_65380 a432989dc27133224b321ab5836df4cd 422 Gene3D G3DSA:2.130.10.30 22 278 3.4E-53 T 14-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II AMIS_65380 a432989dc27133224b321ab5836df4cd 422 Pfam PF13540 Regulator of chromosome condensation (RCC1) repeat 125 154 1.3E-6 T 14-10-2018 AMIS_65380 a432989dc27133224b321ab5836df4cd 422 Pfam PF13540 Regulator of chromosome condensation (RCC1) repeat 175 204 4.9E-10 T 14-10-2018 AMIS_65380 a432989dc27133224b321ab5836df4cd 422 Pfam PF13540 Regulator of chromosome condensation (RCC1) repeat 227 255 2.9E-8 T 14-10-2018 AMIS_65380 a432989dc27133224b321ab5836df4cd 422 Pfam PF13540 Regulator of chromosome condensation (RCC1) repeat 78 105 2.3E-9 T 14-10-2018 AMIS_65380 a432989dc27133224b321ab5836df4cd 422 Pfam PF13540 Regulator of chromosome condensation (RCC1) repeat 280 305 3.0E-7 T 14-10-2018 AMIS_65380 a432989dc27133224b321ab5836df4cd 422 Pfam PF00415 Regulator of chromosome condensation (RCC1) repeat 391 421 5.3E-5 T 14-10-2018 IPR000408 Regulator of chromosome condensation, RCC1 AMIS_65380 a432989dc27133224b321ab5836df4cd 422 Pfam PF00415 Regulator of chromosome condensation (RCC1) repeat 341 386 3.5E-8 T 14-10-2018 IPR000408 Regulator of chromosome condensation, RCC1 AMIS_18600 b40736a230bc180a78b8cff015ab13d6 602 Pfam PF04294 VanW like protein 393 521 5.4E-43 T 14-10-2018 IPR007391 Vancomycin resistance VanW AMIS_18600 b40736a230bc180a78b8cff015ab13d6 602 Pfam PF12229 Putative peptidoglycan binding domain 236 353 9.2E-13 T 14-10-2018 IPR022029 Putative peptidoglycan binding domain AMIS_960 ea83b09b49b77946441877dfcb025ca4 125 Gene3D G3DSA:1.10.10.10 18 122 5.5E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_960 ea83b09b49b77946441877dfcb025ca4 125 Pfam PF01022 Bacterial regulatory protein, arsR family 41 89 1.9E-17 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_960 ea83b09b49b77946441877dfcb025ca4 125 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 60 78 - T 14-10-2018 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 AMIS_960 ea83b09b49b77946441877dfcb025ca4 125 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 86 101 1.9E-22 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_960 ea83b09b49b77946441877dfcb025ca4 125 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 36 51 1.9E-22 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_960 ea83b09b49b77946441877dfcb025ca4 125 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 71 86 1.9E-22 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_960 ea83b09b49b77946441877dfcb025ca4 125 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 58 69 1.9E-22 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_960 ea83b09b49b77946441877dfcb025ca4 125 SMART SM00418 34 115 5.0E-28 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_960 ea83b09b49b77946441877dfcb025ca4 125 SUPERFAMILY SSF46785 24 114 3.79E-28 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_54110 6e83bc37f07a29e07046e1daceb3370e 140 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 107 131 - T 14-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site AMIS_54110 6e83bc37f07a29e07046e1daceb3370e 140 Gene3D G3DSA:1.20.120.910 12 140 7.2E-26 T 14-10-2018 AMIS_54110 6e83bc37f07a29e07046e1daceb3370e 140 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 102 137 2.5E-8 T 14-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AMIS_54110 6e83bc37f07a29e07046e1daceb3370e 140 SUPERFAMILY SSF57716 104 138 2.71E-8 T 14-10-2018 AMIS_57810 ce786abc0d4fc29fe86520503c2cd38f 797 TIGRFAM TIGR02416 CO_dehy_Mo_lg: carbon-monoxide dehydrogenase, large subunit 29 788 0.0 T 14-10-2018 IPR012780 Carbon-monoxide dehydrogenase, large subunit GO:0005507|GO:0018492|GO:0030151 MetaCyc: PWY-7750 AMIS_57810 ce786abc0d4fc29fe86520503c2cd38f 797 Gene3D G3DSA:3.30.365.10 147 372 1.8E-72 T 14-10-2018 AMIS_57810 ce786abc0d4fc29fe86520503c2cd38f 797 SUPERFAMILY SSF54665 23 164 1.01E-45 T 14-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily AMIS_57810 ce786abc0d4fc29fe86520503c2cd38f 797 Gene3D G3DSA:3.30.365.10 388 767 6.9E-144 T 14-10-2018 AMIS_57810 ce786abc0d4fc29fe86520503c2cd38f 797 Gene3D G3DSA:3.30.365.10 204 300 1.8E-72 T 14-10-2018 AMIS_57810 ce786abc0d4fc29fe86520503c2cd38f 797 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 168 727 3.1E-166 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMIS_57810 ce786abc0d4fc29fe86520503c2cd38f 797 Gene3D G3DSA:3.30.365.10 475 642 6.9E-144 T 14-10-2018 AMIS_57810 ce786abc0d4fc29fe86520503c2cd38f 797 SUPERFAMILY SSF56003 136 790 2.22E-195 T 14-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 AMIS_57810 ce786abc0d4fc29fe86520503c2cd38f 797 SMART SM01008 35 144 1.2E-52 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AMIS_57810 ce786abc0d4fc29fe86520503c2cd38f 797 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 36 143 1.3E-34 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AMIS_57810 ce786abc0d4fc29fe86520503c2cd38f 797 Gene3D G3DSA:3.90.1170.50 6 143 4.2E-51 T 14-10-2018 AMIS_48580 362998131469fd82ca648c0c901cc132 323 Pfam PF13407 Periplasmic binding protein domain 44 289 3.3E-40 T 14-10-2018 IPR025997 Periplasmic binding protein AMIS_48580 362998131469fd82ca648c0c901cc132 323 SUPERFAMILY SSF53822 40 314 2.69E-49 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_48580 362998131469fd82ca648c0c901cc132 323 Gene3D G3DSA:3.40.50.2300 52 304 4.1E-83 T 14-10-2018 AMIS_48580 362998131469fd82ca648c0c901cc132 323 Gene3D G3DSA:3.40.50.2300 146 306 4.1E-83 T 14-10-2018 AMIS_6840 cdd9886caaf69ec895cdc932d931fe68 498 SUPERFAMILY SSF63411 20 166 5.32E-16 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMIS_6840 cdd9886caaf69ec895cdc932d931fe68 498 Gene3D G3DSA:3.30.830.10 9 173 8.8E-15 T 14-10-2018 AMIS_6840 cdd9886caaf69ec895cdc932d931fe68 498 Gene3D G3DSA:3.30.830.10 206 361 4.2E-6 T 14-10-2018 AMIS_70290 0a62458fb40b96c57b1b3779be55ff6d 468 Gene3D G3DSA:3.30.930.10 2 281 1.4E-93 T 14-10-2018 AMIS_70290 0a62458fb40b96c57b1b3779be55ff6d 468 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 102 266 1.0E-15 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMIS_70290 0a62458fb40b96c57b1b3779be55ff6d 468 Pfam PF03129 Anticodon binding domain 288 378 2.9E-14 T 14-10-2018 IPR004154 Anticodon-binding AMIS_70290 0a62458fb40b96c57b1b3779be55ff6d 468 Gene3D G3DSA:3.40.50.800 282 396 1.4E-24 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily AMIS_70290 0a62458fb40b96c57b1b3779be55ff6d 468 TIGRFAM TIGR00408 proS_fam_I: proline--tRNA ligase 7 448 2.6E-147 T 14-10-2018 IPR004499 Proline-tRNA ligase, class IIa, archaeal-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 AMIS_70290 0a62458fb40b96c57b1b3779be55ff6d 468 Hamap MF_01571 Proline--tRNA ligase [proS]. 5 468 39.629 T 14-10-2018 IPR004499 Proline-tRNA ligase, class IIa, archaeal-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 AMIS_70290 0a62458fb40b96c57b1b3779be55ff6d 468 SMART SM00946 407 468 1.5E-4 T 14-10-2018 IPR016061 Proline-tRNA ligase, class II, C-terminal GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 AMIS_70290 0a62458fb40b96c57b1b3779be55ff6d 468 SUPERFAMILY SSF52954 276 399 2.42E-27 T 14-10-2018 AMIS_70290 0a62458fb40b96c57b1b3779be55ff6d 468 SUPERFAMILY SSF55681 10 275 1.38E-71 T 14-10-2018 AMIS_70290 0a62458fb40b96c57b1b3779be55ff6d 468 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 4.9E-6 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AMIS_70290 0a62458fb40b96c57b1b3779be55ff6d 468 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 4.9E-6 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AMIS_70290 0a62458fb40b96c57b1b3779be55ff6d 468 PRINTS PR01046 Prolyl-tRNA synthetase signature 63 81 4.9E-6 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AMIS_70290 0a62458fb40b96c57b1b3779be55ff6d 468 PRINTS PR01046 Prolyl-tRNA synthetase signature 143 154 4.9E-6 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AMIS_70060 e2b7f21dbf48b7e9105c5dae6a9a3d44 252 SUPERFAMILY SSF53633 18 251 1.44E-66 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AMIS_70060 e2b7f21dbf48b7e9105c5dae6a9a3d44 252 PIRSF PIRSF005650 15 252 1.5E-85 T 14-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 AMIS_70060 e2b7f21dbf48b7e9105c5dae6a9a3d44 252 Hamap MF_01220_B Uridylate kinase [pyrH]. 18 251 40.746 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 AMIS_70060 e2b7f21dbf48b7e9105c5dae6a9a3d44 252 Pfam PF00696 Amino acid kinase family 22 229 2.1E-29 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AMIS_70060 e2b7f21dbf48b7e9105c5dae6a9a3d44 252 Gene3D G3DSA:3.40.1160.10 13 252 4.4E-74 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AMIS_70060 e2b7f21dbf48b7e9105c5dae6a9a3d44 252 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 21 251 2.3E-86 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 AMIS_72880 154e3d4ec9d22be98e1b08a8d97dda4e 230 SMART SM00895 104 224 6.9E-15 T 14-10-2018 IPR011711 GntR, C-terminal AMIS_72880 154e3d4ec9d22be98e1b08a8d97dda4e 230 SUPERFAMILY SSF48008 102 229 1.05E-18 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AMIS_72880 154e3d4ec9d22be98e1b08a8d97dda4e 230 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 69 1.8E-19 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_72880 154e3d4ec9d22be98e1b08a8d97dda4e 230 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 4.7E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_72880 154e3d4ec9d22be98e1b08a8d97dda4e 230 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 4.7E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_72880 154e3d4ec9d22be98e1b08a8d97dda4e 230 Pfam PF07729 FCD domain 104 223 9.7E-16 T 14-10-2018 IPR011711 GntR, C-terminal AMIS_72880 154e3d4ec9d22be98e1b08a8d97dda4e 230 Gene3D G3DSA:1.10.10.10 4 83 1.0E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_72880 154e3d4ec9d22be98e1b08a8d97dda4e 230 SUPERFAMILY SSF46785 7 79 1.21E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_72880 154e3d4ec9d22be98e1b08a8d97dda4e 230 Gene3D G3DSA:1.20.120.530 85 230 4.1E-21 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AMIS_72880 154e3d4ec9d22be98e1b08a8d97dda4e 230 SMART SM00345 14 75 5.7E-19 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_12640 da9404184971f103eaa6ee1a5d779dec 486 PIRSF PIRSF000538 3 484 4.1E-155 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AMIS_12640 da9404184971f103eaa6ee1a5d779dec 486 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 5 481 6.3E-200 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 AMIS_12640 da9404184971f103eaa6ee1a5d779dec 486 Hamap MF_00186 Glycerol kinase [glpK]. 3 485 51.108 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 AMIS_12640 da9404184971f103eaa6ee1a5d779dec 486 SUPERFAMILY SSF53067 242 479 8.35E-76 T 14-10-2018 AMIS_12640 da9404184971f103eaa6ee1a5d779dec 486 Gene3D G3DSA:3.30.420.40 1 240 2.1E-97 T 14-10-2018 AMIS_12640 da9404184971f103eaa6ee1a5d779dec 486 Gene3D G3DSA:3.30.420.40 241 483 9.8E-86 T 14-10-2018 AMIS_12640 da9404184971f103eaa6ee1a5d779dec 486 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 239 1.6E-70 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AMIS_12640 da9404184971f103eaa6ee1a5d779dec 486 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 350 370 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AMIS_12640 da9404184971f103eaa6ee1a5d779dec 486 SUPERFAMILY SSF53067 5 242 4.88E-84 T 14-10-2018 AMIS_12640 da9404184971f103eaa6ee1a5d779dec 486 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 248 438 8.9E-60 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AMIS_63240 03062804e96cb94b8407e9b8fffe9360 343 Gene3D G3DSA:3.40.50.2300 172 301 5.9E-70 T 14-10-2018 AMIS_63240 03062804e96cb94b8407e9b8fffe9360 343 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 54 1.2E-13 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_63240 03062804e96cb94b8407e9b8fffe9360 343 SMART SM00354 7 77 8.4E-16 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_63240 03062804e96cb94b8407e9b8fffe9360 343 SUPERFAMILY SSF53822 67 341 6.48E-65 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_63240 03062804e96cb94b8407e9b8fffe9360 343 Gene3D G3DSA:3.40.50.2300 67 316 5.9E-70 T 14-10-2018 AMIS_63240 03062804e96cb94b8407e9b8fffe9360 343 SUPERFAMILY SSF47413 9 65 5.0E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_63240 03062804e96cb94b8407e9b8fffe9360 343 ProSitePatterns PS00356 LacI-type HTH domain signature. 10 28 - T 14-10-2018 AMIS_63240 03062804e96cb94b8407e9b8fffe9360 343 Gene3D G3DSA:1.10.260.40 5 64 3.0E-18 T 14-10-2018 AMIS_63240 03062804e96cb94b8407e9b8fffe9360 343 Pfam PF13377 Periplasmic binding protein-like domain 181 338 3.3E-33 T 14-10-2018 AMIS_5680 c406c54cf2becc073c6d4d32b77f4bf9 502 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 14 491 3.9E-143 T 14-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_5680 c406c54cf2becc073c6d4d32b77f4bf9 502 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 149 168 4.6E-39 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_5680 c406c54cf2becc073c6d4d32b77f4bf9 502 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 334 353 4.6E-39 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_5680 c406c54cf2becc073c6d4d32b77f4bf9 502 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 179 203 4.6E-39 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_5680 c406c54cf2becc073c6d4d32b77f4bf9 502 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 246 270 4.6E-39 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_5680 c406c54cf2becc073c6d4d32b77f4bf9 502 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 386 412 4.6E-39 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_5680 c406c54cf2becc073c6d4d32b77f4bf9 502 Pfam PF00361 Proton-conducting membrane transporter 143 427 3.1E-73 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_5190 204d634f925ae9f36d06475ad2f76549 533 SUPERFAMILY SSF158472 214 263 6.8E-8 T 14-10-2018 AMIS_5190 204d634f925ae9f36d06475ad2f76549 533 Gene3D G3DSA:1.10.287.130 282 364 1.2E-14 T 14-10-2018 AMIS_5190 204d634f925ae9f36d06475ad2f76549 533 SMART SM00304 214 267 7.0E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_5190 204d634f925ae9f36d06475ad2f76549 533 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 457 2.3E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_5190 204d634f925ae9f36d06475ad2f76549 533 PRINTS PR00344 Bacterial sensor protein C-terminal signature 476 494 2.3E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_5190 204d634f925ae9f36d06475ad2f76549 533 PRINTS PR00344 Bacterial sensor protein C-terminal signature 500 513 2.3E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_5190 204d634f925ae9f36d06475ad2f76549 533 SUPERFAMILY SSF47384 280 362 7.46E-18 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_5190 204d634f925ae9f36d06475ad2f76549 533 Gene3D G3DSA:1.20.1480.50 175 273 2.0E-9 T 14-10-2018 AMIS_5190 204d634f925ae9f36d06475ad2f76549 533 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 405 514 1.1E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_5190 204d634f925ae9f36d06475ad2f76549 533 Pfam PF05227 CHASE3 domain 49 176 2.1E-23 T 14-10-2018 IPR007891 CHASE3 AMIS_5190 204d634f925ae9f36d06475ad2f76549 533 Gene3D G3DSA:1.20.1440.210 54 174 3.9E-13 T 14-10-2018 AMIS_5190 204d634f925ae9f36d06475ad2f76549 533 SUPERFAMILY SSF55874 353 516 1.31E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_5190 204d634f925ae9f36d06475ad2f76549 533 SMART SM00387 404 516 1.5E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_5190 204d634f925ae9f36d06475ad2f76549 533 Gene3D G3DSA:3.30.565.10 367 517 1.8E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_5190 204d634f925ae9f36d06475ad2f76549 533 Pfam PF00512 His Kinase A (phospho-acceptor) domain 297 362 3.0E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_5190 204d634f925ae9f36d06475ad2f76549 533 SMART SM00388 296 364 3.3E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_3920 92466e08fb6a67ddb35797b59bb0572a 306 SUPERFAMILY SSF74650 12 305 1.32E-62 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 AMIS_3920 92466e08fb6a67ddb35797b59bb0572a 306 Gene3D G3DSA:2.70.98.10 12 306 4.2E-76 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AMIS_3920 92466e08fb6a67ddb35797b59bb0572a 306 Pfam PF01263 Aldose 1-epimerase 14 300 6.5E-43 T 14-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 AMIS_46040 4f14586d137fa5e46c28f1392739982f 1285 SUPERFAMILY SSF48452 887 1006 1.73E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_46040 4f14586d137fa5e46c28f1392739982f 1285 Pfam PF13374 Tetratricopeptide repeat 1185 1226 4.4E-4 T 14-10-2018 AMIS_46040 4f14586d137fa5e46c28f1392739982f 1285 Pfam PF13374 Tetratricopeptide repeat 897 932 0.002 T 14-10-2018 AMIS_46040 4f14586d137fa5e46c28f1392739982f 1285 Pfam PF13374 Tetratricopeptide repeat 1143 1183 6.0E-6 T 14-10-2018 AMIS_46040 4f14586d137fa5e46c28f1392739982f 1285 SUPERFAMILY SSF48452 970 1122 7.05E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_46040 4f14586d137fa5e46c28f1392739982f 1285 SUPERFAMILY SSF52540 7 250 1.61E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_46040 4f14586d137fa5e46c28f1392739982f 1285 Gene3D G3DSA:3.40.50.300 1 302 9.6E-30 T 14-10-2018 AMIS_46040 4f14586d137fa5e46c28f1392739982f 1285 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 11 217 1.7E-8 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AMIS_46040 4f14586d137fa5e46c28f1392739982f 1285 SUPERFAMILY SSF48452 1098 1235 5.58E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_46040 4f14586d137fa5e46c28f1392739982f 1285 Gene3D G3DSA:1.25.40.10 849 1044 1.9E-28 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_46040 4f14586d137fa5e46c28f1392739982f 1285 Pfam PF00931 NB-ARC domain 499 670 5.6E-9 T 14-10-2018 IPR002182 NB-ARC GO:0043531 Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-6798695|Reactome: R-HSA-6803207|Reactome: R-HSA-8953750 AMIS_46040 4f14586d137fa5e46c28f1392739982f 1285 Gene3D G3DSA:3.40.50.300 463 620 9.9E-26 T 14-10-2018 AMIS_46040 4f14586d137fa5e46c28f1392739982f 1285 Gene3D G3DSA:1.25.40.10 1053 1274 5.5E-35 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_46040 4f14586d137fa5e46c28f1392739982f 1285 Pfam PF13424 Tetratricopeptide repeat 1023 1089 2.4E-8 T 14-10-2018 AMIS_46040 4f14586d137fa5e46c28f1392739982f 1285 Pfam PF13424 Tetratricopeptide repeat 938 998 1.8E-10 T 14-10-2018 AMIS_46040 4f14586d137fa5e46c28f1392739982f 1285 SUPERFAMILY SSF52540 466 710 9.02E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_46040 4f14586d137fa5e46c28f1392739982f 1285 PRINTS PR00364 Disease resistance protein signature 755 771 2.8E-5 T 14-10-2018 AMIS_46040 4f14586d137fa5e46c28f1392739982f 1285 PRINTS PR00364 Disease resistance protein signature 501 516 2.8E-5 T 14-10-2018 AMIS_46040 4f14586d137fa5e46c28f1392739982f 1285 PRINTS PR00364 Disease resistance protein signature 654 668 2.8E-5 T 14-10-2018 AMIS_48720 1afeaff25ddd442503122dd9b7763318 394 Gene3D G3DSA:1.10.287.470 103 159 3.3E-48 T 14-10-2018 AMIS_48720 1afeaff25ddd442503122dd9b7763318 394 Pfam PF13533 Biotin-lipoyl like 76 117 1.3E-10 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AMIS_48720 1afeaff25ddd442503122dd9b7763318 394 Gene3D G3DSA:2.40.50.100 69 212 3.3E-48 T 14-10-2018 AMIS_48720 1afeaff25ddd442503122dd9b7763318 394 SUPERFAMILY SSF111369 59 232 1.2E-13 T 14-10-2018 AMIS_48720 1afeaff25ddd442503122dd9b7763318 394 Gene3D G3DSA:2.20.25.620 292 349 3.3E-48 T 14-10-2018 AMIS_48720 1afeaff25ddd442503122dd9b7763318 394 Pfam PF13437 HlyD family secretion protein 204 273 9.8E-7 T 14-10-2018 AMIS_48720 1afeaff25ddd442503122dd9b7763318 394 Gene3D G3DSA:2.40.30.170 63 291 3.3E-48 T 14-10-2018 AMIS_37410 6f8cfcfffff5692c2c1dc33a77bfd070 213 SMART SM00421 147 204 7.2E-23 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_37410 6f8cfcfffff5692c2c1dc33a77bfd070 213 Gene3D G3DSA:3.40.50.12740 2 207 1.2E-62 T 14-10-2018 AMIS_37410 6f8cfcfffff5692c2c1dc33a77bfd070 213 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_37410 6f8cfcfffff5692c2c1dc33a77bfd070 213 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 204 9.6E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_37410 6f8cfcfffff5692c2c1dc33a77bfd070 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 4.1E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_37410 6f8cfcfffff5692c2c1dc33a77bfd070 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 4.1E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_37410 6f8cfcfffff5692c2c1dc33a77bfd070 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 4.1E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_37410 6f8cfcfffff5692c2c1dc33a77bfd070 213 SUPERFAMILY SSF52172 1 134 6.26E-29 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_37410 6f8cfcfffff5692c2c1dc33a77bfd070 213 SMART SM00448 2 115 3.0E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_37410 6f8cfcfffff5692c2c1dc33a77bfd070 213 SUPERFAMILY SSF46894 133 206 1.16E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_37410 6f8cfcfffff5692c2c1dc33a77bfd070 213 Pfam PF00072 Response regulator receiver domain 4 116 8.2E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_40300 812dab52b69b6158917439474e9f6b17 750 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 327 477 4.5E-36 T 14-10-2018 IPR000160 GGDEF domain AMIS_40300 812dab52b69b6158917439474e9f6b17 750 Gene3D G3DSA:3.20.20.450 495 746 1.8E-87 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_40300 812dab52b69b6158917439474e9f6b17 750 SMART SM00267 317 481 2.9E-53 T 14-10-2018 IPR000160 GGDEF domain AMIS_40300 812dab52b69b6158917439474e9f6b17 750 SUPERFAMILY SSF141868 497 744 2.22E-76 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_40300 812dab52b69b6158917439474e9f6b17 750 Gene3D G3DSA:3.30.70.270 327 494 2.6E-51 T 14-10-2018 AMIS_40300 812dab52b69b6158917439474e9f6b17 750 Pfam PF00990 Diguanylate cyclase, GGDEF domain 330 475 5.6E-40 T 14-10-2018 IPR000160 GGDEF domain AMIS_40300 812dab52b69b6158917439474e9f6b17 750 SUPERFAMILY SSF55073 333 483 3.84E-44 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_40300 812dab52b69b6158917439474e9f6b17 750 SMART SM00052 491 738 6.4E-97 T 14-10-2018 IPR001633 EAL domain AMIS_40300 812dab52b69b6158917439474e9f6b17 750 Pfam PF00563 EAL domain 497 733 4.4E-65 T 14-10-2018 IPR001633 EAL domain AMIS_70530 9ef1c76771c7036979ead18f06980858 403 SUPERFAMILY SSF52540 196 400 1.88E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_70530 9ef1c76771c7036979ead18f06980858 403 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 373 386 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AMIS_70530 9ef1c76771c7036979ead18f06980858 403 SUPERFAMILY SSF47364 100 178 1.57E-16 T 14-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 AMIS_70530 9ef1c76771c7036979ead18f06980858 403 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 127 400 56.882 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 AMIS_70530 9ef1c76771c7036979ead18f06980858 403 Pfam PF00448 SRP54-type protein, GTPase domain 201 400 1.5E-70 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AMIS_70530 9ef1c76771c7036979ead18f06980858 403 Gene3D G3DSA:3.40.50.300 194 388 1.8E-99 T 14-10-2018 AMIS_70530 9ef1c76771c7036979ead18f06980858 403 SMART SM00382 200 376 4.0E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_70530 9ef1c76771c7036979ead18f06980858 403 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 129 399 5.4E-100 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 AMIS_70530 9ef1c76771c7036979ead18f06980858 403 SMART SM00963 104 184 2.1E-16 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AMIS_70530 9ef1c76771c7036979ead18f06980858 403 Pfam PF02881 SRP54-type protein, helical bundle domain 116 179 2.4E-10 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AMIS_70530 9ef1c76771c7036979ead18f06980858 403 SMART SM00962 201 400 7.7E-102 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AMIS_70530 9ef1c76771c7036979ead18f06980858 403 Gene3D G3DSA:1.20.120.140 103 398 1.8E-99 T 14-10-2018 AMIS_73710 60f742013b641dc9436665b128435041 206 SUPERFAMILY SSF52980 28 179 4.45E-24 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AMIS_73710 60f742013b641dc9436665b128435041 206 Gene3D G3DSA:3.90.1570.10 27 195 4.6E-23 T 14-10-2018 AMIS_73710 60f742013b641dc9436665b128435041 206 Pfam PF05685 Putative restriction endonuclease 38 192 6.3E-23 T 14-10-2018 IPR008538 Domain of unknown function DUF820 AMIS_80340 7164a2941673940e697743bc1e13ca62 114 Pfam PF04341 Protein of unknown function, DUF485 12 98 1.5E-31 T 14-10-2018 IPR007436 Protein of unknown function DUF485 AMIS_57900 4911511965a3333a728c54a0cf1997f5 294 SUPERFAMILY SSF53613 1 288 5.46E-55 T 14-10-2018 IPR029056 Ribokinase-like AMIS_57900 4911511965a3333a728c54a0cf1997f5 294 Pfam PF00294 pfkB family carbohydrate kinase 2 286 4.7E-36 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB AMIS_57900 4911511965a3333a728c54a0cf1997f5 294 PRINTS PR00990 Ribokinase signature 172 187 3.2E-15 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AMIS_57900 4911511965a3333a728c54a0cf1997f5 294 PRINTS PR00990 Ribokinase signature 32 51 3.2E-15 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AMIS_57900 4911511965a3333a728c54a0cf1997f5 294 PRINTS PR00990 Ribokinase signature 5 26 3.2E-15 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AMIS_57900 4911511965a3333a728c54a0cf1997f5 294 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 242 255 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AMIS_57900 4911511965a3333a728c54a0cf1997f5 294 Gene3D G3DSA:3.40.1190.20 1 293 9.7E-60 T 14-10-2018 IPR029056 Ribokinase-like AMIS_57900 4911511965a3333a728c54a0cf1997f5 294 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 37 61 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AMIS_54270 7626a843ef18384fe5638177f25c1408 492 SUPERFAMILY SSF55931 38 460 1.08E-56 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AMIS_54270 7626a843ef18384fe5638177f25c1408 492 Gene3D G3DSA:3.30.590.20 39 462 4.8E-62 T 14-10-2018 AMIS_54270 7626a843ef18384fe5638177f25c1408 492 PIRSF PIRSF012666 1 492 2.4E-226 T 14-10-2018 IPR016602 Uncharacterised conserved protein UCP012666 AMIS_58180 ab40ff07a7bc157f876222576b38b94d 263 Gene3D G3DSA:2.60.130.10 3 235 3.5E-36 T 14-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AMIS_58180 ab40ff07a7bc157f876222576b38b94d 263 Pfam PF00775 Dioxygenase 99 170 6.9E-9 T 14-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 AMIS_58180 ab40ff07a7bc157f876222576b38b94d 263 SUPERFAMILY SSF49482 15 240 8.63E-41 T 14-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AMIS_8200 4a6c9628facd4044cbbefd4832e7adf1 379 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 147 5.1E-27 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMIS_8200 4a6c9628facd4044cbbefd4832e7adf1 379 Gene3D G3DSA:3.40.50.720 166 309 1.9E-109 T 14-10-2018 AMIS_8200 4a6c9628facd4044cbbefd4832e7adf1 379 Pfam PF00107 Zinc-binding dehydrogenase 189 321 1.4E-25 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMIS_8200 4a6c9628facd4044cbbefd4832e7adf1 379 SUPERFAMILY SSF51735 154 331 1.03E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_8200 4a6c9628facd4044cbbefd4832e7adf1 379 SUPERFAMILY SSF50129 2 185 1.83E-54 T 14-10-2018 IPR011032 GroES-like superfamily AMIS_8200 4a6c9628facd4044cbbefd4832e7adf1 379 TIGRFAM TIGR03451 mycoS_dep_FDH: S-(hydroxymethyl)mycothiol dehydrogenase 4 372 2.1E-192 T 14-10-2018 IPR017816 S-(hydroxymethyl)mycothiol dehydrogenase MetaCyc: PWY-7908 AMIS_8200 4a6c9628facd4044cbbefd4832e7adf1 379 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AMIS_8200 4a6c9628facd4044cbbefd4832e7adf1 379 Gene3D G3DSA:3.90.180.10 9 355 1.9E-109 T 14-10-2018 AMIS_58130 d47d086915ad886a119ab86c377d27b4 408 Pfam PF04932 O-Antigen ligase 189 326 1.8E-15 T 14-10-2018 IPR007016 O-antigen ligase-related AMIS_61930 2f0e2f94f44cb2648ce03495d99b3178 158 SUPERFAMILY SSF52121 10 155 1.57E-45 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AMIS_61930 2f0e2f94f44cb2648ce03495d99b3178 158 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 17 149 8.6E-36 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AMIS_61930 2f0e2f94f44cb2648ce03495d99b3178 158 Gene3D G3DSA:3.40.50.960 2 157 4.9E-50 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AMIS_61930 2f0e2f94f44cb2648ce03495d99b3178 158 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 16 150 9.6E-45 T 14-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AMIS_61930 2f0e2f94f44cb2648ce03495d99b3178 158 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 12 155 24.235 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AMIS_11820 3cf37556c7cc0738cd7bad971285b04c 156 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 36 149 1.7E-33 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AMIS_11820 3cf37556c7cc0738cd7bad971285b04c 156 Gene3D G3DSA:3.40.390.30 2 151 1.9E-40 T 14-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 AMIS_11820 3cf37556c7cc0738cd7bad971285b04c 156 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 119 129 - T 14-10-2018 IPR020549 Endoribonuclease YbeY, conserved site AMIS_11820 3cf37556c7cc0738cd7bad971285b04c 156 SUPERFAMILY SSF55486 3 151 1.42E-39 T 14-10-2018 AMIS_11820 3cf37556c7cc0738cd7bad971285b04c 156 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 2 153 21.498 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AMIS_11820 3cf37556c7cc0738cd7bad971285b04c 156 Pfam PF02130 Uncharacterized protein family UPF0054 18 148 9.1E-38 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AMIS_55620 ff1e600ccf4d9cfe987deb74af206872 547 Gene3D G3DSA:3.10.310.70 84 202 1.3E-134 T 14-10-2018 AMIS_55620 ff1e600ccf4d9cfe987deb74af206872 547 SUPERFAMILY SSF51338 7 545 8.51E-24 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMIS_55620 ff1e600ccf4d9cfe987deb74af206872 547 SUPERFAMILY SSF51556 65 503 2.22E-29 T 14-10-2018 IPR032466 Metal-dependent hydrolase AMIS_55620 ff1e600ccf4d9cfe987deb74af206872 547 Gene3D G3DSA:3.20.20.140 66 504 1.3E-134 T 14-10-2018 AMIS_55620 ff1e600ccf4d9cfe987deb74af206872 547 Gene3D G3DSA:2.30.40.10 14 522 1.3E-134 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMIS_55620 ff1e600ccf4d9cfe987deb74af206872 547 Pfam PF07969 Amidohydrolase family 54 545 2.9E-96 T 14-10-2018 IPR013108 Amidohydrolase 3 AMIS_12890 fc154992c782cc6380b47799c1767b90 547 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 118 129 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMIS_12890 fc154992c782cc6380b47799c1767b90 547 Pfam PF05746 DALR anticodon binding domain 436 547 3.7E-27 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AMIS_12890 fc154992c782cc6380b47799c1767b90 547 SUPERFAMILY SSF55190 1 91 3.66E-12 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 AMIS_12890 fc154992c782cc6380b47799c1767b90 547 SUPERFAMILY SSF52374 105 426 3.56E-81 T 14-10-2018 AMIS_12890 fc154992c782cc6380b47799c1767b90 547 Gene3D G3DSA:3.30.1360.70 1 101 3.0E-15 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 AMIS_12890 fc154992c782cc6380b47799c1767b90 547 Gene3D G3DSA:3.40.50.620 107 434 2.6E-94 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMIS_12890 fc154992c782cc6380b47799c1767b90 547 Pfam PF00750 tRNA synthetases class I (R) 103 421 1.8E-94 T 14-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 AMIS_12890 fc154992c782cc6380b47799c1767b90 547 SMART SM00836 436 547 4.0E-34 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AMIS_12890 fc154992c782cc6380b47799c1767b90 547 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 547 24.271 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AMIS_12890 fc154992c782cc6380b47799c1767b90 547 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 29 81 3.2E-10 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AMIS_12890 fc154992c782cc6380b47799c1767b90 547 SUPERFAMILY SSF47323 430 547 1.05E-31 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMIS_12890 fc154992c782cc6380b47799c1767b90 547 PRINTS PR01038 Arginyl-tRNA synthetase signature 149 162 4.7E-25 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AMIS_12890 fc154992c782cc6380b47799c1767b90 547 PRINTS PR01038 Arginyl-tRNA synthetase signature 297 318 4.7E-25 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AMIS_12890 fc154992c782cc6380b47799c1767b90 547 PRINTS PR01038 Arginyl-tRNA synthetase signature 110 125 4.7E-25 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AMIS_12890 fc154992c782cc6380b47799c1767b90 547 PRINTS PR01038 Arginyl-tRNA synthetase signature 125 141 4.7E-25 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AMIS_12890 fc154992c782cc6380b47799c1767b90 547 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 31 546 2.3E-121 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AMIS_12890 fc154992c782cc6380b47799c1767b90 547 Gene3D G3DSA:1.10.730.10 435 547 3.6E-29 T 14-10-2018 AMIS_12890 fc154992c782cc6380b47799c1767b90 547 SMART SM01016 5 82 5.1E-14 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AMIS_1030 ead2242e6318691c950794b6fc39074a 341 Pfam PF01116 Fructose-bisphosphate aldolase class-II 9 336 1.4E-75 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AMIS_1030 ead2242e6318691c950794b6fc39074a 341 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 158 169 - T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AMIS_1030 ead2242e6318691c950794b6fc39074a 341 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 86 97 - T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AMIS_1030 ead2242e6318691c950794b6fc39074a 341 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 3 336 1.4E-125 T 14-10-2018 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 AMIS_1030 ead2242e6318691c950794b6fc39074a 341 PIRSF PIRSF001359 6 338 3.0E-60 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AMIS_1030 ead2242e6318691c950794b6fc39074a 341 SUPERFAMILY SSF51569 5 337 1.61E-92 T 14-10-2018 AMIS_1030 ead2242e6318691c950794b6fc39074a 341 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 10 337 5.0E-69 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AMIS_1030 ead2242e6318691c950794b6fc39074a 341 Gene3D G3DSA:3.20.20.70 1 341 7.3E-117 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_61540 89e66332e9b05b7d541df3dfc4f2cc1b 310 PRINTS PR00102 Ornithine carbamoyltransferase signature 118 132 2.8E-25 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AMIS_61540 89e66332e9b05b7d541df3dfc4f2cc1b 310 PRINTS PR00102 Ornithine carbamoyltransferase signature 222 232 2.8E-25 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AMIS_61540 89e66332e9b05b7d541df3dfc4f2cc1b 310 PRINTS PR00102 Ornithine carbamoyltransferase signature 45 59 2.8E-25 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AMIS_61540 89e66332e9b05b7d541df3dfc4f2cc1b 310 PRINTS PR00102 Ornithine carbamoyltransferase signature 284 295 2.8E-25 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AMIS_61540 89e66332e9b05b7d541df3dfc4f2cc1b 310 PRINTS PR00102 Ornithine carbamoyltransferase signature 78 91 2.8E-25 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AMIS_61540 89e66332e9b05b7d541df3dfc4f2cc1b 310 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 3 306 76.195 T 14-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 AMIS_61540 89e66332e9b05b7d541df3dfc4f2cc1b 310 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 149 303 2.1E-57 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 AMIS_61540 89e66332e9b05b7d541df3dfc4f2cc1b 310 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 129 140 1.4E-28 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMIS_61540 89e66332e9b05b7d541df3dfc4f2cc1b 310 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 258 267 1.4E-28 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMIS_61540 89e66332e9b05b7d541df3dfc4f2cc1b 310 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 47 66 1.4E-28 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMIS_61540 89e66332e9b05b7d541df3dfc4f2cc1b 310 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 1.4E-28 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMIS_61540 89e66332e9b05b7d541df3dfc4f2cc1b 310 SUPERFAMILY SSF53671 3 305 5.76E-99 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AMIS_61540 89e66332e9b05b7d541df3dfc4f2cc1b 310 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 4 305 4.8E-111 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AMIS_61540 89e66332e9b05b7d541df3dfc4f2cc1b 310 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 4 142 4.1E-41 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 AMIS_61540 89e66332e9b05b7d541df3dfc4f2cc1b 310 Gene3D G3DSA:3.40.50.1370 10 301 1.0E-117 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AMIS_61540 89e66332e9b05b7d541df3dfc4f2cc1b 310 Gene3D G3DSA:3.40.50.1370 132 292 1.0E-117 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AMIS_28160 c9d2ff1f65530207adb8e045daaa8bd0 282 Pfam PF00950 ABC 3 transport family 16 270 4.0E-70 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 AMIS_28160 c9d2ff1f65530207adb8e045daaa8bd0 282 Gene3D G3DSA:1.10.3470.10 40 276 1.2E-10 T 14-10-2018 IPR037294 ABC transporter, BtuC-like AMIS_28160 c9d2ff1f65530207adb8e045daaa8bd0 282 TIGRFAM TIGR03770 anch_rpt_perm: anchored repeat-type ABC transporter, permease subunit 2 271 3.8E-134 T 14-10-2018 IPR022392 Anchored repeat-type ABC transporter, permease subunit AMIS_28160 c9d2ff1f65530207adb8e045daaa8bd0 282 SUPERFAMILY SSF81345 17 266 3.27E-41 T 14-10-2018 IPR037294 ABC transporter, BtuC-like AMIS_24970 3a828e6a1b7d1f304d721fcef2ff1d76 162 Gene3D G3DSA:1.10.10.10 98 162 5.4E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_24970 3a828e6a1b7d1f304d721fcef2ff1d76 162 SUPERFAMILY SSF88946 4 87 7.85E-15 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_24970 3a828e6a1b7d1f304d721fcef2ff1d76 162 Pfam PF08281 Sigma-70, region 4 104 157 6.5E-16 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_24970 3a828e6a1b7d1f304d721fcef2ff1d76 162 SUPERFAMILY SSF88659 102 161 8.78E-15 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_24970 3a828e6a1b7d1f304d721fcef2ff1d76 162 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 9 161 5.1E-22 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_24970 3a828e6a1b7d1f304d721fcef2ff1d76 162 Gene3D G3DSA:1.10.1740.10 4 83 2.4E-10 T 14-10-2018 AMIS_24970 3a828e6a1b7d1f304d721fcef2ff1d76 162 TIGRFAM TIGR02983 SigE-fam_strep: RNA polymerase sigma-70 factor, sigma-E family 7 161 4.6E-44 T 14-10-2018 IPR014325 RNA polymerase sigma-E factor, actinobacteria GO:0016987 AMIS_24970 3a828e6a1b7d1f304d721fcef2ff1d76 162 Pfam PF04542 Sigma-70 region 2 23 81 1.1E-11 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_77240 422276346c84aa925c7a72a6073d4822 574 SUPERFAMILY SSF51735 18 166 4.88E-15 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_77240 422276346c84aa925c7a72a6073d4822 574 SUPERFAMILY SSF51735 354 499 1.0E-26 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_77240 422276346c84aa925c7a72a6073d4822 574 SUPERFAMILY SSF116726 501 572 1.24E-5 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AMIS_77240 422276346c84aa925c7a72a6073d4822 574 Pfam PF02254 TrkA-N domain 22 135 3.6E-12 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AMIS_77240 422276346c84aa925c7a72a6073d4822 574 Pfam PF02254 TrkA-N domain 358 466 4.5E-21 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AMIS_77240 422276346c84aa925c7a72a6073d4822 574 Gene3D G3DSA:3.40.50.720 17 175 8.0E-21 T 14-10-2018 AMIS_77240 422276346c84aa925c7a72a6073d4822 574 Gene3D G3DSA:3.40.50.720 354 507 7.6E-30 T 14-10-2018 AMIS_78830 d1df3fa510d522fd1e41aba937d4b8e3 525 PRINTS PR01036 Tetracycline resistance protein TetB signature 413 432 5.5E-10 T 14-10-2018 AMIS_78830 d1df3fa510d522fd1e41aba937d4b8e3 525 PRINTS PR01036 Tetracycline resistance protein TetB signature 116 136 5.5E-10 T 14-10-2018 AMIS_78830 d1df3fa510d522fd1e41aba937d4b8e3 525 PRINTS PR01036 Tetracycline resistance protein TetB signature 146 170 5.5E-10 T 14-10-2018 AMIS_78830 d1df3fa510d522fd1e41aba937d4b8e3 525 PRINTS PR01036 Tetracycline resistance protein TetB signature 25 49 5.5E-10 T 14-10-2018 AMIS_78830 d1df3fa510d522fd1e41aba937d4b8e3 525 SUPERFAMILY SSF103473 17 505 9.68E-66 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_78830 d1df3fa510d522fd1e41aba937d4b8e3 525 Pfam PF07690 Major Facilitator Superfamily 26 422 1.2E-48 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_78830 d1df3fa510d522fd1e41aba937d4b8e3 525 Gene3D G3DSA:1.20.1720.10 24 211 1.2E-45 T 14-10-2018 AMIS_78830 d1df3fa510d522fd1e41aba937d4b8e3 525 Gene3D G3DSA:1.20.1250.20 272 505 1.1E-17 T 14-10-2018 AMIS_21690 73ce083e18345a11700c6883f4cd82f9 273 SMART SM00882 3 224 2.2E-24 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 AMIS_21690 73ce083e18345a11700c6883f4cd82f9 273 Pfam PF01144 Coenzyme A transferase 4 223 1.1E-37 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 AMIS_21690 73ce083e18345a11700c6883f4cd82f9 273 SUPERFAMILY SSF100950 4 251 6.98E-63 T 14-10-2018 IPR037171 NagB/RpiA transferase-like AMIS_21690 73ce083e18345a11700c6883f4cd82f9 273 Gene3D G3DSA:3.30.30.40 113 149 1.8E-69 T 14-10-2018 AMIS_21690 73ce083e18345a11700c6883f4cd82f9 273 Gene3D G3DSA:3.40.1080.10 3 251 1.8E-69 T 14-10-2018 AMIS_12950 6bf38fef0067408a095b7a4f491f6838 278 Gene3D G3DSA:3.40.1210.10 1 276 3.8E-62 T 14-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AMIS_12950 6bf38fef0067408a095b7a4f491f6838 278 Pfam PF01975 Survival protein SurE 3 208 2.5E-43 T 14-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AMIS_12950 6bf38fef0067408a095b7a4f491f6838 278 SUPERFAMILY SSF64167 1 263 5.49E-47 T 14-10-2018 AMIS_62330 53d9b7b1252c36989adf0272aee2b948 893 Gene3D G3DSA:3.30.54.20 640 693 1.8E-41 T 14-10-2018 AMIS_62330 53d9b7b1252c36989adf0272aee2b948 893 Gene3D G3DSA:3.30.930.10 1 245 1.1E-91 T 14-10-2018 AMIS_62330 53d9b7b1252c36989adf0272aee2b948 893 SUPERFAMILY SSF55186 568 728 9.55E-45 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 AMIS_62330 53d9b7b1252c36989adf0272aee2b948 893 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 893 156.79 T 14-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 AMIS_62330 53d9b7b1252c36989adf0272aee2b948 893 Pfam PF01411 tRNA synthetases class II (A) 5 571 2.8E-183 T 14-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 AMIS_62330 53d9b7b1252c36989adf0272aee2b948 893 Gene3D G3DSA:3.30.980.10 578 713 1.8E-41 T 14-10-2018 AMIS_62330 53d9b7b1252c36989adf0272aee2b948 893 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 669 712 3.6E-15 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 AMIS_62330 53d9b7b1252c36989adf0272aee2b948 893 SMART SM00863 669 712 4.0E-19 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 AMIS_62330 53d9b7b1252c36989adf0272aee2b948 893 PRINTS PR00980 Alanyl-tRNA synthetase signature 196 207 6.1E-29 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AMIS_62330 53d9b7b1252c36989adf0272aee2b948 893 PRINTS PR00980 Alanyl-tRNA synthetase signature 287 303 6.1E-29 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AMIS_62330 53d9b7b1252c36989adf0272aee2b948 893 PRINTS PR00980 Alanyl-tRNA synthetase signature 311 324 6.1E-29 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AMIS_62330 53d9b7b1252c36989adf0272aee2b948 893 PRINTS PR00980 Alanyl-tRNA synthetase signature 229 242 6.1E-29 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AMIS_62330 53d9b7b1252c36989adf0272aee2b948 893 PRINTS PR00980 Alanyl-tRNA synthetase signature 70 81 6.1E-29 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AMIS_62330 53d9b7b1252c36989adf0272aee2b948 893 SUPERFAMILY SSF50447 471 565 1.02E-15 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AMIS_62330 53d9b7b1252c36989adf0272aee2b948 893 Pfam PF02272 DHHA1 domain 751 889 8.9E-14 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 AMIS_62330 53d9b7b1252c36989adf0272aee2b948 893 SUPERFAMILY SSF55681 2 248 4.14E-85 T 14-10-2018 AMIS_62330 53d9b7b1252c36989adf0272aee2b948 893 SUPERFAMILY SSF101353 249 451 3.92E-54 T 14-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 AMIS_62330 53d9b7b1252c36989adf0272aee2b948 893 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 5 872 3.7E-237 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AMIS_62330 53d9b7b1252c36989adf0272aee2b948 893 Gene3D G3DSA:2.40.30.130 476 562 7.5E-12 T 14-10-2018 AMIS_62330 53d9b7b1252c36989adf0272aee2b948 893 Gene3D G3DSA:3.10.310.40 782 890 5.5E-12 T 14-10-2018 AMIS_34220 6d0a567ac8309da0cea73316fd94071c 480 SUPERFAMILY SSF56112 9 268 8.77E-74 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMIS_34220 6d0a567ac8309da0cea73316fd94071c 480 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 19 42 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 AMIS_34220 6d0a567ac8309da0cea73316fd94071c 480 Pfam PF00069 Protein kinase domain 13 256 1.6E-46 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMIS_34220 6d0a567ac8309da0cea73316fd94071c 480 SMART SM00220 13 272 2.1E-56 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMIS_34220 6d0a567ac8309da0cea73316fd94071c 480 Gene3D G3DSA:3.30.200.20 2 92 1.0E-29 T 14-10-2018 AMIS_34220 6d0a567ac8309da0cea73316fd94071c 480 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 132 144 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 AMIS_34220 6d0a567ac8309da0cea73316fd94071c 480 Gene3D G3DSA:1.10.510.10 94 272 4.8E-48 T 14-10-2018 AMIS_76290 e29f6a0d34a158027568a60e54a287f0 435 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 18 432 5.0E-159 T 14-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMIS_76290 e29f6a0d34a158027568a60e54a287f0 435 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 143 352 1.1E-73 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMIS_76290 e29f6a0d34a158027568a60e54a287f0 435 SMART SM00382 155 336 1.5E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_76290 e29f6a0d34a158027568a60e54a287f0 435 Gene3D G3DSA:3.40.50.12240 14 435 5.5E-135 T 14-10-2018 AMIS_76290 e29f6a0d34a158027568a60e54a287f0 435 SUPERFAMILY SSF52540 91 357 5.18E-91 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_61880 3e3c71c1f6e208df0228d1a7d082eeb7 287 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 2 182 1.2E-52 T 14-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AMIS_61880 3e3c71c1f6e208df0228d1a7d082eeb7 287 SUPERFAMILY SSF53850 1 213 6.36E-58 T 14-10-2018 AMIS_61880 3e3c71c1f6e208df0228d1a7d082eeb7 287 Gene3D G3DSA:3.30.70.120 215 281 2.3E-24 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AMIS_61880 3e3c71c1f6e208df0228d1a7d082eeb7 287 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 141 162 - T 14-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 AMIS_61880 3e3c71c1f6e208df0228d1a7d082eeb7 287 Pfam PF08029 HisG, C-terminal domain 212 284 9.0E-25 T 14-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AMIS_61880 3e3c71c1f6e208df0228d1a7d082eeb7 287 Gene3D G3DSA:3.40.190.10 89 178 1.1E-54 T 14-10-2018 AMIS_61880 3e3c71c1f6e208df0228d1a7d082eeb7 287 Pfam PF01634 ATP phosphoribosyltransferase 49 207 3.7E-42 T 14-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AMIS_61880 3e3c71c1f6e208df0228d1a7d082eeb7 287 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 1 287 31.876 T 14-10-2018 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 AMIS_61880 3e3c71c1f6e208df0228d1a7d082eeb7 287 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 197 286 1.7E-28 T 14-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AMIS_61880 3e3c71c1f6e208df0228d1a7d082eeb7 287 SUPERFAMILY SSF54913 215 286 1.78E-21 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AMIS_61880 3e3c71c1f6e208df0228d1a7d082eeb7 287 Gene3D G3DSA:3.40.190.10 2 210 1.1E-54 T 14-10-2018 AMIS_45610 0de12867c6a4c82eb4adf0a3f1ca2b20 144 Gene3D G3DSA:3.30.1490.190 84 144 2.6E-14 T 14-10-2018 AMIS_45610 0de12867c6a4c82eb4adf0a3f1ca2b20 144 Pfam PF01475 Ferric uptake regulator family 13 122 8.1E-21 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 AMIS_45610 0de12867c6a4c82eb4adf0a3f1ca2b20 144 SUPERFAMILY SSF46785 4 134 7.32E-35 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_45610 0de12867c6a4c82eb4adf0a3f1ca2b20 144 Gene3D G3DSA:1.10.10.10 1 82 3.5E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_990 c73d7ff6c57254fc11c30bfe57fdbcdb 832 Gene3D G3DSA:3.40.50.300 1 169 7.3E-43 T 14-10-2018 AMIS_990 c73d7ff6c57254fc11c30bfe57fdbcdb 832 Gene3D G3DSA:3.60.21.10 170 425 2.7E-73 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like AMIS_990 c73d7ff6c57254fc11c30bfe57fdbcdb 832 Gene3D G3DSA:3.30.470.30 620 832 1.7E-68 T 14-10-2018 AMIS_990 c73d7ff6c57254fc11c30bfe57fdbcdb 832 Pfam PF13671 AAA domain 10 135 1.6E-21 T 14-10-2018 AMIS_990 c73d7ff6c57254fc11c30bfe57fdbcdb 832 Pfam PF16542 PNKP adenylyltransferase domain, ligase domain 463 769 1.8E-124 T 14-10-2018 IPR032380 Polynucleotide kinase-phosphatase, ligase domain AMIS_990 c73d7ff6c57254fc11c30bfe57fdbcdb 832 TIGRFAM TIGR04075 bacter_Pnkp: polynucleotide kinase-phosphatase 2 832 0.0 T 14-10-2018 IPR024028 Polynucleotide kinase-phosphatase, bacterial AMIS_990 c73d7ff6c57254fc11c30bfe57fdbcdb 832 Pfam PF16536 PNKP adenylyltransferase domain, C-terminal region 773 832 1.7E-27 T 14-10-2018 IPR032390 Polynucleotide kinase-phosphatase, C-terminal AMIS_990 c73d7ff6c57254fc11c30bfe57fdbcdb 832 SUPERFAMILY SSF56300 165 430 7.6E-43 T 14-10-2018 AMIS_990 c73d7ff6c57254fc11c30bfe57fdbcdb 832 Gene3D G3DSA:3.30.470.30 435 600 1.2E-49 T 14-10-2018 AMIS_990 c73d7ff6c57254fc11c30bfe57fdbcdb 832 Pfam PF00149 Calcineurin-like phosphoesterase 181 376 1.0E-10 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AMIS_990 c73d7ff6c57254fc11c30bfe57fdbcdb 832 SUPERFAMILY SSF52540 10 172 4.85E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_990 c73d7ff6c57254fc11c30bfe57fdbcdb 832 SUPERFAMILY SSF56091 511 737 1.44E-11 T 14-10-2018 AMIS_24710 5fb6e2e9901768357e27c34c56144b2d 275 PRINTS PR00412 Epoxide hydrolase signature 49 64 7.3E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_24710 5fb6e2e9901768357e27c34c56144b2d 275 PRINTS PR00412 Epoxide hydrolase signature 250 272 7.3E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_24710 5fb6e2e9901768357e27c34c56144b2d 275 PRINTS PR00412 Epoxide hydrolase signature 29 47 7.3E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_24710 5fb6e2e9901768357e27c34c56144b2d 275 PRINTS PR00111 Alpha/beta hydrolase fold signature 93 106 2.1E-9 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_24710 5fb6e2e9901768357e27c34c56144b2d 275 PRINTS PR00111 Alpha/beta hydrolase fold signature 49 64 2.1E-9 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_24710 5fb6e2e9901768357e27c34c56144b2d 275 PRINTS PR00111 Alpha/beta hydrolase fold signature 218 232 2.1E-9 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_24710 5fb6e2e9901768357e27c34c56144b2d 275 Pfam PF00561 alpha/beta hydrolase fold 24 256 2.2E-21 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_24710 5fb6e2e9901768357e27c34c56144b2d 275 Gene3D G3DSA:3.40.50.1820 3 274 8.5E-74 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_24710 5fb6e2e9901768357e27c34c56144b2d 275 SUPERFAMILY SSF53474 1 274 1.51E-59 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_34060 4269754ee406dae5783224bdbfa6cdd3 301 Gene3D G3DSA:3.90.180.10 8 298 3.9E-66 T 14-10-2018 AMIS_34060 4269754ee406dae5783224bdbfa6cdd3 301 SUPERFAMILY SSF50129 1 141 1.03E-34 T 14-10-2018 IPR011032 GroES-like superfamily AMIS_34060 4269754ee406dae5783224bdbfa6cdd3 301 SMART SM00829 10 299 1.8E-9 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMIS_34060 4269754ee406dae5783224bdbfa6cdd3 301 SUPERFAMILY SSF51735 121 230 4.09E-15 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_34060 4269754ee406dae5783224bdbfa6cdd3 301 Pfam PF13602 Zinc-binding dehydrogenase 201 299 3.2E-10 T 14-10-2018 AMIS_34060 4269754ee406dae5783224bdbfa6cdd3 301 Gene3D G3DSA:3.40.50.720 131 250 3.9E-66 T 14-10-2018 AMIS_34060 4269754ee406dae5783224bdbfa6cdd3 301 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 89 2.3E-5 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMIS_75300 1b2226f10eff8b1fa6ffef6383515207 437 SUPERFAMILY SSF53218 203 352 1.06E-31 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily AMIS_75300 1b2226f10eff8b1fa6ffef6383515207 437 Pfam PF03454 MoeA C-terminal region (domain IV) 362 433 1.6E-12 T 14-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMIS_75300 1b2226f10eff8b1fa6ffef6383515207 437 Gene3D G3DSA:2.40.340.10 359 434 1.1E-10 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMIS_75300 1b2226f10eff8b1fa6ffef6383515207 437 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 271 284 - T 14-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 AMIS_75300 1b2226f10eff8b1fa6ffef6383515207 437 Pfam PF00994 Probable molybdopterin binding domain 207 347 4.2E-21 T 14-10-2018 IPR001453 MoaB/Mog domain AMIS_75300 1b2226f10eff8b1fa6ffef6383515207 437 Gene3D G3DSA:2.170.190.11 57 167 2.6E-84 T 14-10-2018 AMIS_75300 1b2226f10eff8b1fa6ffef6383515207 437 Pfam PF03453 MoeA N-terminal region (domain I and II) 17 193 5.0E-34 T 14-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMIS_75300 1b2226f10eff8b1fa6ffef6383515207 437 Gene3D G3DSA:3.40.980.10 201 347 2.6E-84 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily AMIS_75300 1b2226f10eff8b1fa6ffef6383515207 437 Gene3D G3DSA:3.90.105.10 36 200 2.6E-84 T 14-10-2018 AMIS_75300 1b2226f10eff8b1fa6ffef6383515207 437 SMART SM00852 206 349 6.8E-21 T 14-10-2018 IPR001453 MoaB/Mog domain AMIS_75300 1b2226f10eff8b1fa6ffef6383515207 437 SUPERFAMILY SSF63867 359 434 7.98E-13 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMIS_75300 1b2226f10eff8b1fa6ffef6383515207 437 SUPERFAMILY SSF63882 14 200 1.7E-38 T 14-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMIS_58800 3c128c68dd28618ac14112408fa6929d 249 Pfam PF07947 YhhN family 38 190 2.2E-14 T 14-10-2018 IPR012506 YhhN-like GO:0016021 AMIS_18140 0b8cc18e7708296000da069abd1445a5 510 Gene3D G3DSA:1.20.1720.10 26 235 3.1E-38 T 14-10-2018 AMIS_18140 0b8cc18e7708296000da069abd1445a5 510 PRINTS PR01036 Tetracycline resistance protein TetB signature 150 174 5.2E-5 T 14-10-2018 AMIS_18140 0b8cc18e7708296000da069abd1445a5 510 PRINTS PR01036 Tetracycline resistance protein TetB signature 216 234 5.2E-5 T 14-10-2018 AMIS_18140 0b8cc18e7708296000da069abd1445a5 510 PRINTS PR01036 Tetracycline resistance protein TetB signature 29 53 5.2E-5 T 14-10-2018 AMIS_18140 0b8cc18e7708296000da069abd1445a5 510 PRINTS PR01036 Tetracycline resistance protein TetB signature 120 140 5.2E-5 T 14-10-2018 AMIS_18140 0b8cc18e7708296000da069abd1445a5 510 SUPERFAMILY SSF103473 24 482 1.1E-55 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_18140 0b8cc18e7708296000da069abd1445a5 510 Pfam PF07690 Major Facilitator Superfamily 32 424 7.2E-47 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_18140 0b8cc18e7708296000da069abd1445a5 510 Gene3D G3DSA:1.20.1250.20 272 488 1.5E-17 T 14-10-2018 AMIS_28520 eee16918ec2e6f745f1553f63e652f0d 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 66 8.4E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_28520 eee16918ec2e6f745f1553f63e652f0d 193 Gene3D G3DSA:1.10.357.10 4 186 3.6E-21 T 14-10-2018 AMIS_28520 eee16918ec2e6f745f1553f63e652f0d 193 SUPERFAMILY SSF46689 10 82 1.95E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_28520 eee16918ec2e6f745f1553f63e652f0d 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 3.4E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_28520 eee16918ec2e6f745f1553f63e652f0d 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 3.4E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_17930 b4e1542abdd1f3d73979c99ee75cc32d 278 Gene3D G3DSA:3.60.20.10 1 277 1.2E-86 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMIS_17930 b4e1542abdd1f3d73979c99ee75cc32d 278 Pfam PF13230 Glutamine amidotransferases class-II 28 153 1.8E-11 T 14-10-2018 IPR026869 Putative glutamine amidotransferase type 2 AMIS_17930 b4e1542abdd1f3d73979c99ee75cc32d 278 SUPERFAMILY SSF56235 2 267 6.78E-29 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMIS_58260 b3886270434131a6187443f6cedce1f6 456 PIRSF PIRSF000124 39 455 1.7E-64 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AMIS_58260 b3886270434131a6187443f6cedce1f6 456 SUPERFAMILY SSF52413 344 448 1.18E-25 T 14-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 AMIS_58260 b3886270434131a6187443f6cedce1f6 456 Gene3D G3DSA:3.40.50.720 236 455 1.9E-60 T 14-10-2018 AMIS_58260 b3886270434131a6187443f6cedce1f6 456 Gene3D G3DSA:3.40.50.720 26 233 1.8E-61 T 14-10-2018 AMIS_58260 b3886270434131a6187443f6cedce1f6 456 SMART SM00984 355 450 3.9E-23 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AMIS_58260 b3886270434131a6187443f6cedce1f6 456 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 39 216 1.2E-35 T 14-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AMIS_58260 b3886270434131a6187443f6cedce1f6 456 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 39 445 1.6E-120 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AMIS_58260 b3886270434131a6187443f6cedce1f6 456 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 237 328 6.4E-26 T 14-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AMIS_58260 b3886270434131a6187443f6cedce1f6 456 PIRSF PIRSF500136 29 455 7.4E-146 T 14-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 AMIS_58260 b3886270434131a6187443f6cedce1f6 456 SUPERFAMILY SSF48179 236 334 6.8E-29 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMIS_58260 b3886270434131a6187443f6cedce1f6 456 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 356 446 2.6E-19 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AMIS_58260 b3886270434131a6187443f6cedce1f6 456 SUPERFAMILY SSF51735 39 230 8.69E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_65690 c1ca8b5a7dc7a9d40df2b32dba78470e 951 Gene3D G3DSA:3.40.50.300 268 405 1.3E-13 T 14-10-2018 AMIS_65690 c1ca8b5a7dc7a9d40df2b32dba78470e 951 Pfam PF03704 Bacterial transcriptional activator domain 141 251 3.3E-8 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain AMIS_65690 c1ca8b5a7dc7a9d40df2b32dba78470e 951 Gene3D G3DSA:1.10.10.10 1 91 2.2E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_65690 c1ca8b5a7dc7a9d40df2b32dba78470e 951 SMART SM01043 95 251 6.4E-20 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain AMIS_65690 c1ca8b5a7dc7a9d40df2b32dba78470e 951 SUPERFAMILY SSF52540 268 501 4.36E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_65690 c1ca8b5a7dc7a9d40df2b32dba78470e 951 SMART SM00862 15 88 2.0E-13 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_65690 c1ca8b5a7dc7a9d40df2b32dba78470e 951 Gene3D G3DSA:1.25.40.10 93 267 2.2E-21 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_65690 c1ca8b5a7dc7a9d40df2b32dba78470e 951 SUPERFAMILY SSF46894 4 88 7.94E-15 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_65690 c1ca8b5a7dc7a9d40df2b32dba78470e 951 SUPERFAMILY SSF48452 141 269 4.74E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_65690 c1ca8b5a7dc7a9d40df2b32dba78470e 951 Gene3D G3DSA:1.25.40.10 675 885 1.7E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_65690 c1ca8b5a7dc7a9d40df2b32dba78470e 951 Pfam PF00486 Transcriptional regulatory protein, C terminal 24 88 1.5E-11 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_36690 ddc5896985f602d096500274615eff69 402 Gene3D G3DSA:1.20.200.30 7 360 2.2E-94 T 14-10-2018 AMIS_36690 ddc5896985f602d096500274615eff69 402 PRINTS PR00149 Fumarate lyase superfamily signature 98 116 3.6E-14 T 14-10-2018 IPR000362 Fumarate lyase family AMIS_36690 ddc5896985f602d096500274615eff69 402 PRINTS PR00149 Fumarate lyase superfamily signature 143 161 3.6E-14 T 14-10-2018 IPR000362 Fumarate lyase family AMIS_36690 ddc5896985f602d096500274615eff69 402 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 3.6E-14 T 14-10-2018 IPR000362 Fumarate lyase family AMIS_36690 ddc5896985f602d096500274615eff69 402 Pfam PF00206 Lyase 90 295 1.2E-28 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal AMIS_36690 ddc5896985f602d096500274615eff69 402 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AMIS_36690 ddc5896985f602d096500274615eff69 402 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 1.5E-6 T 14-10-2018 AMIS_36690 ddc5896985f602d096500274615eff69 402 PRINTS PR00145 Argininosuccinate lyase family signature 97 119 1.5E-6 T 14-10-2018 AMIS_36690 ddc5896985f602d096500274615eff69 402 PRINTS PR00145 Argininosuccinate lyase family signature 138 158 1.5E-6 T 14-10-2018 AMIS_36690 ddc5896985f602d096500274615eff69 402 SUPERFAMILY SSF48557 15 391 6.91E-66 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 AMIS_8910 8b7b7ae96f5874fe3c55a13899231ff2 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 122 142 4.7E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_8910 8b7b7ae96f5874fe3c55a13899231ff2 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 56 72 4.7E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_8910 8b7b7ae96f5874fe3c55a13899231ff2 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 92 108 4.7E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_8910 8b7b7ae96f5874fe3c55a13899231ff2 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 73 88 4.7E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_8910 8b7b7ae96f5874fe3c55a13899231ff2 151 SUPERFAMILY SSF46785 15 144 1.35E-28 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_8910 8b7b7ae96f5874fe3c55a13899231ff2 151 Gene3D G3DSA:1.10.10.10 7 145 5.8E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_8910 8b7b7ae96f5874fe3c55a13899231ff2 151 SMART SM00347 32 132 1.6E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_8910 8b7b7ae96f5874fe3c55a13899231ff2 151 Pfam PF12802 MarR family 42 95 7.3E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_71870 ca6a625443b055502dba8031ce43e66f 191 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 14 185 5.0E-37 T 14-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 AMIS_71870 ca6a625443b055502dba8031ce43e66f 191 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 9 180 4.6E-51 T 14-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 AMIS_71870 ca6a625443b055502dba8031ce43e66f 191 SUPERFAMILY SSF89028 7 186 3.34E-55 T 14-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 AMIS_71870 ca6a625443b055502dba8031ce43e66f 191 Pfam PF01923 Cobalamin adenosyltransferase 8 176 4.2E-55 T 14-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 AMIS_71870 ca6a625443b055502dba8031ce43e66f 191 Gene3D G3DSA:1.20.1200.10 29 191 1.3E-57 T 14-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 AMIS_68630 aefc54166f913b2e9a2a7b40ea3a5f18 293 Gene3D G3DSA:3.40.1190.20 1 293 8.0E-56 T 14-10-2018 IPR029056 Ribokinase-like AMIS_68630 aefc54166f913b2e9a2a7b40ea3a5f18 293 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 248 261 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AMIS_68630 aefc54166f913b2e9a2a7b40ea3a5f18 293 Pfam PF00294 pfkB family carbohydrate kinase 2 291 2.2E-42 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB AMIS_68630 aefc54166f913b2e9a2a7b40ea3a5f18 293 SUPERFAMILY SSF53613 2 293 9.98E-57 T 14-10-2018 IPR029056 Ribokinase-like AMIS_68630 aefc54166f913b2e9a2a7b40ea3a5f18 293 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 35 59 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AMIS_51270 55736053278d4fa46afb17bfe492e2fc 325 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 316 6.2E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_51270 55736053278d4fa46afb17bfe492e2fc 325 SUPERFAMILY SSF161098 84 312 2.35E-49 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_51270 55736053278d4fa46afb17bfe492e2fc 325 Gene3D G3DSA:1.10.3720.10 79 324 5.3E-58 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_36360 4d9c679950641341eeb85a70fc6a38ea 455 Gene3D G3DSA:3.90.1150.10 26 439 1.1E-114 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMIS_36360 4d9c679950641341eeb85a70fc6a38ea 455 Pfam PF00202 Aminotransferase class-III 51 436 1.9E-44 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMIS_36360 4d9c679950641341eeb85a70fc6a38ea 455 Gene3D G3DSA:3.40.640.10 92 348 1.1E-114 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_36360 4d9c679950641341eeb85a70fc6a38ea 455 SUPERFAMILY SSF53383 42 453 2.91E-82 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_74770 46ba288bd8ebe8c5d22664dbd46c9e5b 1189 SMART SM00304 359 436 1.1E-4 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_74770 46ba288bd8ebe8c5d22664dbd46c9e5b 1189 Gene3D G3DSA:3.30.565.10 517 664 7.4E-14 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_74770 46ba288bd8ebe8c5d22664dbd46c9e5b 1189 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 554 657 4.8E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_74770 46ba288bd8ebe8c5d22664dbd46c9e5b 1189 Pfam PF00672 HAMP domain 359 432 1.4E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_74770 46ba288bd8ebe8c5d22664dbd46c9e5b 1189 Pfam PF08376 Nitrate and nitrite sensing 76 320 1.3E-33 T 14-10-2018 IPR013587 Nitrate/nitrite sensing protein AMIS_74770 46ba288bd8ebe8c5d22664dbd46c9e5b 1189 SUPERFAMILY SSF55874 542 658 8.77E-17 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_74770 46ba288bd8ebe8c5d22664dbd46c9e5b 1189 SMART SM00387 549 660 3.1E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_44240 a55566c2a212c9af10d7e53fbe46bbe8 1986 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1459 1548 2.4E-18 T 14-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 AMIS_44240 a55566c2a212c9af10d7e53fbe46bbe8 1986 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1133 1162 0.0022 T 14-10-2018 IPR006530 YD repeat AMIS_44240 a55566c2a212c9af10d7e53fbe46bbe8 1986 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 989 1029 4.1E-5 T 14-10-2018 IPR006530 YD repeat AMIS_44240 a55566c2a212c9af10d7e53fbe46bbe8 1986 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 577 618 2.7E-9 T 14-10-2018 IPR006530 YD repeat AMIS_44240 a55566c2a212c9af10d7e53fbe46bbe8 1986 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 556 584 0.0014 T 14-10-2018 IPR006530 YD repeat AMIS_44240 a55566c2a212c9af10d7e53fbe46bbe8 1986 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 408 441 1.2E-5 T 14-10-2018 IPR006530 YD repeat AMIS_44240 a55566c2a212c9af10d7e53fbe46bbe8 1986 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1088 1121 9.2E-4 T 14-10-2018 IPR006530 YD repeat AMIS_44240 a55566c2a212c9af10d7e53fbe46bbe8 1986 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 944 978 1.9E-4 T 14-10-2018 IPR006530 YD repeat AMIS_44240 a55566c2a212c9af10d7e53fbe46bbe8 1986 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1010 1042 3.3E-5 T 14-10-2018 IPR006530 YD repeat AMIS_44240 a55566c2a212c9af10d7e53fbe46bbe8 1986 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 834 871 3.4E-6 T 14-10-2018 IPR006530 YD repeat AMIS_44240 a55566c2a212c9af10d7e53fbe46bbe8 1986 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 872 909 1.5E-4 T 14-10-2018 IPR006530 YD repeat AMIS_44240 a55566c2a212c9af10d7e53fbe46bbe8 1986 Gene3D G3DSA:2.170.16.10 1741 1882 6.2E-41 T 14-10-2018 AMIS_44240 a55566c2a212c9af10d7e53fbe46bbe8 1986 SUPERFAMILY SSF101898 660 903 6.28E-5 T 14-10-2018 AMIS_44240 a55566c2a212c9af10d7e53fbe46bbe8 1986 SMART SM00306 1742 1840 5.1E-12 T 14-10-2018 IPR003587 Hint domain N-terminal Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AMIS_44240 a55566c2a212c9af10d7e53fbe46bbe8 1986 Pfam PF07591 Pretoxin HINT domain 1754 1882 5.7E-19 T 14-10-2018 AMIS_44240 a55566c2a212c9af10d7e53fbe46bbe8 1986 Gene3D G3DSA:3.90.930.1 517 672 1.3E-10 T 14-10-2018 AMIS_44240 a55566c2a212c9af10d7e53fbe46bbe8 1986 Pfam PF05593 RHS Repeat 410 441 1.2E-4 T 14-10-2018 IPR031325 RHS repeat AMIS_44240 a55566c2a212c9af10d7e53fbe46bbe8 1986 Pfam PF05593 RHS Repeat 577 613 7.0E-6 T 14-10-2018 IPR031325 RHS repeat AMIS_44240 a55566c2a212c9af10d7e53fbe46bbe8 1986 Pfam PF05593 RHS Repeat 834 866 1.3E-5 T 14-10-2018 IPR031325 RHS repeat AMIS_44240 a55566c2a212c9af10d7e53fbe46bbe8 1986 Pfam PF05593 RHS Repeat 1154 1189 6.9E-5 T 14-10-2018 IPR031325 RHS repeat AMIS_44240 a55566c2a212c9af10d7e53fbe46bbe8 1986 Pfam PF05593 RHS Repeat 1010 1039 2.8E-5 T 14-10-2018 IPR031325 RHS repeat AMIS_44240 a55566c2a212c9af10d7e53fbe46bbe8 1986 TIGRFAM TIGR01443 intein_Cterm: intein C-terminal splicing region 1858 1883 3.7E-5 T 14-10-2018 IPR030934 Intein C-terminal splicing region AMIS_44240 a55566c2a212c9af10d7e53fbe46bbe8 1986 SUPERFAMILY SSF51294 1744 1883 2.35E-24 T 14-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AMIS_44240 a55566c2a212c9af10d7e53fbe46bbe8 1986 Gene3D G3DSA:2.180.10.10 1013 1548 2.0E-29 T 14-10-2018 AMIS_44240 a55566c2a212c9af10d7e53fbe46bbe8 1986 Gene3D G3DSA:2.180.10.10 801 937 4.9E-8 T 14-10-2018 AMIS_22020 c7e2f83f965d87acb11c5786b7792bc1 497 Gene3D G3DSA:3.40.462.20 252 453 7.4E-76 T 14-10-2018 AMIS_22020 c7e2f83f965d87acb11c5786b7792bc1 497 SUPERFAMILY SSF56176 59 249 1.4E-49 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AMIS_22020 c7e2f83f965d87acb11c5786b7792bc1 497 Pfam PF01565 FAD binding domain 83 217 1.1E-31 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AMIS_22020 c7e2f83f965d87acb11c5786b7792bc1 497 Gene3D G3DSA:3.30.465.50 147 494 7.4E-76 T 14-10-2018 AMIS_22020 c7e2f83f965d87acb11c5786b7792bc1 497 Pfam PF08031 Berberine and berberine like 456 494 1.3E-6 T 14-10-2018 IPR012951 Berberine/berberine-like GO:0016491|GO:0050660|GO:0055114 AMIS_22020 c7e2f83f965d87acb11c5786b7792bc1 497 ProSitePatterns PS00862 Oxygen oxidoreductases covalent FAD-binding site. 83 116 - T 14-10-2018 IPR006093 Oxygen oxidoreductase covalent FAD-binding site GO:0016491|GO:0055114 AMIS_22020 c7e2f83f965d87acb11c5786b7792bc1 497 Gene3D G3DSA:3.30.43.10 57 135 9.6E-23 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 AMIS_41510 2581be80685ac345ae8473d0251a811f 911 SMART SM00421 836 893 3.5E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_41510 2581be80685ac345ae8473d0251a811f 911 Gene3D G3DSA:1.10.10.10 790 906 2.2E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_41510 2581be80685ac345ae8473d0251a811f 911 SMART SM00382 24 153 4.0E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_41510 2581be80685ac345ae8473d0251a811f 911 Pfam PF00196 Bacterial regulatory proteins, luxR family 838 893 3.6E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_41510 2581be80685ac345ae8473d0251a811f 911 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 853 869 1.0E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_41510 2581be80685ac345ae8473d0251a811f 911 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 869 881 1.0E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_41510 2581be80685ac345ae8473d0251a811f 911 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 839 853 1.0E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_41510 2581be80685ac345ae8473d0251a811f 911 ProSitePatterns PS00622 LuxR-type HTH domain signature. 853 880 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_41510 2581be80685ac345ae8473d0251a811f 911 SUPERFAMILY SSF46894 826 895 3.16E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_41510 2581be80685ac345ae8473d0251a811f 911 Gene3D G3DSA:3.40.50.300 14 144 2.1E-6 T 14-10-2018 AMIS_41510 2581be80685ac345ae8473d0251a811f 911 Pfam PF07728 AAA domain (dynein-related subfamily) 28 121 2.2E-6 T 14-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 AMIS_41510 2581be80685ac345ae8473d0251a811f 911 SUPERFAMILY SSF52540 18 198 2.72E-16 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_54960 d1881fd3ed38a30e6ae8f5f768b02d0d 589 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 441 586 5.4E-29 T 14-10-2018 IPR000160 GGDEF domain AMIS_54960 d1881fd3ed38a30e6ae8f5f768b02d0d 589 SUPERFAMILY SSF55073 449 586 1.18E-35 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_54960 d1881fd3ed38a30e6ae8f5f768b02d0d 589 Pfam PF00990 Diguanylate cyclase, GGDEF domain 445 586 2.5E-32 T 14-10-2018 IPR000160 GGDEF domain AMIS_54960 d1881fd3ed38a30e6ae8f5f768b02d0d 589 Gene3D G3DSA:3.30.450.20 305 431 2.2E-22 T 14-10-2018 AMIS_54960 d1881fd3ed38a30e6ae8f5f768b02d0d 589 SUPERFAMILY SSF55785 308 431 4.19E-23 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_54960 d1881fd3ed38a30e6ae8f5f768b02d0d 589 Gene3D G3DSA:3.30.70.270 437 589 1.6E-42 T 14-10-2018 AMIS_54960 d1881fd3ed38a30e6ae8f5f768b02d0d 589 SMART SM00091 319 385 1.3E-8 T 14-10-2018 IPR000014 PAS domain AMIS_54960 d1881fd3ed38a30e6ae8f5f768b02d0d 589 Pfam PF08448 PAS fold 325 435 1.8E-12 T 14-10-2018 IPR013656 PAS fold-4 AMIS_54960 d1881fd3ed38a30e6ae8f5f768b02d0d 589 SMART SM00267 433 587 1.8E-43 T 14-10-2018 IPR000160 GGDEF domain AMIS_54960 d1881fd3ed38a30e6ae8f5f768b02d0d 589 SMART SM00086 392 433 2.2E-4 T 14-10-2018 IPR001610 PAC motif AMIS_54960 d1881fd3ed38a30e6ae8f5f768b02d0d 589 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 315 440 1.1E-21 T 14-10-2018 IPR000014 PAS domain AMIS_40240 47897f9c92da928e1c488c9a2c352491 341 Pfam PF00487 Fatty acid desaturase 59 314 3.7E-40 T 14-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 AMIS_40240 47897f9c92da928e1c488c9a2c352491 341 PIRSF PIRSF015921 5 341 5.3E-76 T 14-10-2018 IPR012171 Fatty acid desaturase GO:0006629|GO:0016021|GO:0016491 AMIS_69880 c38747971f35e7a8d790789fbeb87385 330 Pfam PF00296 Luciferase-like monooxygenase 16 299 5.6E-50 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMIS_69880 c38747971f35e7a8d790789fbeb87385 330 SUPERFAMILY SSF51679 5 321 2.36E-49 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_69880 c38747971f35e7a8d790789fbeb87385 330 Gene3D G3DSA:3.20.20.30 5 323 6.9E-57 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_69880 c38747971f35e7a8d790789fbeb87385 330 TIGRFAM TIGR03841 F420_Rv3093c: probable F420-dependent oxidoreductase, Rv3093c family 12 306 2.8E-100 T 14-10-2018 IPR022526 F420-dependent oxidoreductase, Rv3093c AMIS_3720 2022d3bc6f024082afaaaa1a475aedde 296 SUPERFAMILY SSF53850 16 289 2.54E-72 T 14-10-2018 AMIS_3720 2022d3bc6f024082afaaaa1a475aedde 296 Pfam PF02621 Menaquinone biosynthesis 16 285 4.8E-84 T 14-10-2018 IPR003773 Menaquinone biosynthesis enzyme AMIS_3720 2022d3bc6f024082afaaaa1a475aedde 296 Hamap MF_00996 1,4-dihydroxy-6-naphtoate synthase [mqnD]. 15 291 37.017 T 14-10-2018 IPR030869 1,4-dihydroxy-6-naphtoate synthase GO:0009234|GO:0016829 AMIS_3720 2022d3bc6f024082afaaaa1a475aedde 296 Gene3D G3DSA:3.40.190.10 18 286 2.5E-93 T 14-10-2018 AMIS_3720 2022d3bc6f024082afaaaa1a475aedde 296 Gene3D G3DSA:3.40.190.10 92 201 2.5E-93 T 14-10-2018 AMIS_12630 f582138c8d659ac7d6fd2150632f0024 255 Gene3D G3DSA:3.30.450.40 78 254 1.4E-34 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_12630 f582138c8d659ac7d6fd2150632f0024 255 SUPERFAMILY SSF55781 64 251 6.47E-31 T 14-10-2018 AMIS_12630 f582138c8d659ac7d6fd2150632f0024 255 Pfam PF01614 Bacterial transcriptional regulator 127 249 1.1E-25 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal AMIS_12630 f582138c8d659ac7d6fd2150632f0024 255 Pfam PF09339 IclR helix-turn-helix domain 10 59 8.5E-15 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AMIS_12630 f582138c8d659ac7d6fd2150632f0024 255 SUPERFAMILY SSF46785 8 75 5.71E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_12630 f582138c8d659ac7d6fd2150632f0024 255 Gene3D G3DSA:1.10.10.10 6 73 1.6E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_12630 f582138c8d659ac7d6fd2150632f0024 255 SMART SM00346 8 96 2.7E-20 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AMIS_12880 06488260480c4a44244f555cc646a3ca 411 Gene3D G3DSA:1.20.1250.20 15 401 1.0E-32 T 14-10-2018 AMIS_12880 06488260480c4a44244f555cc646a3ca 411 Pfam PF05977 Transmembrane secretion effector 15 389 1.4E-28 T 14-10-2018 IPR010290 Transmembrane secretion effector AMIS_12880 06488260480c4a44244f555cc646a3ca 411 SUPERFAMILY SSF103473 17 407 4.05E-39 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_28050 9a0717d02c878d699efdd207d0341414 284 Pfam PF00950 ABC 3 transport family 12 263 2.3E-56 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 AMIS_28050 9a0717d02c878d699efdd207d0341414 284 Gene3D G3DSA:1.10.3470.10 39 272 8.2E-9 T 14-10-2018 IPR037294 ABC transporter, BtuC-like AMIS_28050 9a0717d02c878d699efdd207d0341414 284 SUPERFAMILY SSF81345 3 264 1.18E-34 T 14-10-2018 IPR037294 ABC transporter, BtuC-like AMIS_51700 141c97fafd3a670312aaf95c7ba43147 590 Gene3D G3DSA:1.10.287.130 363 429 1.1E-13 T 14-10-2018 AMIS_51700 141c97fafd3a670312aaf95c7ba43147 590 SUPERFAMILY SSF55874 423 588 7.07E-47 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_51700 141c97fafd3a670312aaf95c7ba43147 590 SMART SM00304 316 369 1.6E-13 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_51700 141c97fafd3a670312aaf95c7ba43147 590 Gene3D G3DSA:3.30.565.10 441 589 6.0E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_51700 141c97fafd3a670312aaf95c7ba43147 590 SMART SM00388 370 434 1.7E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_51700 141c97fafd3a670312aaf95c7ba43147 590 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 480 588 1.3E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_51700 141c97fafd3a670312aaf95c7ba43147 590 Gene3D G3DSA:1.10.8.500 315 362 1.7E-9 T 14-10-2018 AMIS_51700 141c97fafd3a670312aaf95c7ba43147 590 Pfam PF00672 HAMP domain 316 366 7.5E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_51700 141c97fafd3a670312aaf95c7ba43147 590 PRINTS PR00344 Bacterial sensor protein C-terminal signature 575 588 4.3E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_51700 141c97fafd3a670312aaf95c7ba43147 590 PRINTS PR00344 Bacterial sensor protein C-terminal signature 534 544 4.3E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_51700 141c97fafd3a670312aaf95c7ba43147 590 PRINTS PR00344 Bacterial sensor protein C-terminal signature 551 569 4.3E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_51700 141c97fafd3a670312aaf95c7ba43147 590 PRINTS PR00344 Bacterial sensor protein C-terminal signature 516 530 4.3E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_51700 141c97fafd3a670312aaf95c7ba43147 590 SUPERFAMILY SSF158472 316 366 1.06E-8 T 14-10-2018 AMIS_51700 141c97fafd3a670312aaf95c7ba43147 590 Pfam PF00512 His Kinase A (phospho-acceptor) domain 371 434 9.4E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_51700 141c97fafd3a670312aaf95c7ba43147 590 SUPERFAMILY SSF47384 353 435 3.34E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_51700 141c97fafd3a670312aaf95c7ba43147 590 SMART SM00387 479 590 7.5E-36 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_15760 7bb9f84161161c0eada73ff0c8be34cf 204 SMART SM00448 11 122 8.4E-38 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_15760 7bb9f84161161c0eada73ff0c8be34cf 204 Pfam PF03861 ANTAR domain 142 193 4.8E-20 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 AMIS_15760 7bb9f84161161c0eada73ff0c8be34cf 204 Pfam PF00072 Response regulator receiver domain 13 122 9.4E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_15760 7bb9f84161161c0eada73ff0c8be34cf 204 SUPERFAMILY SSF52172 10 193 4.41E-55 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_15760 7bb9f84161161c0eada73ff0c8be34cf 204 PIRSF PIRSF036382 2 200 2.2E-67 T 14-10-2018 IPR008327 Signal transduction response regulator, antiterminator AMIS_15760 7bb9f84161161c0eada73ff0c8be34cf 204 Gene3D G3DSA:1.10.10.10 140 200 3.9E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_15760 7bb9f84161161c0eada73ff0c8be34cf 204 SMART SM01012 138 193 1.1E-22 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 AMIS_15760 7bb9f84161161c0eada73ff0c8be34cf 204 Gene3D G3DSA:3.40.50.2300 2 139 2.8E-38 T 14-10-2018 AMIS_22840 505372d12d8664c4965878fbcb973ab5 412 PIRSF PIRSF006356 1 410 7.9E-133 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AMIS_22840 505372d12d8664c4965878fbcb973ab5 412 SUPERFAMILY SSF55909 5 409 3.67E-133 T 14-10-2018 AMIS_22840 505372d12d8664c4965878fbcb973ab5 412 Pfam PF02274 Amidinotransferase 19 407 4.5E-111 T 14-10-2018 AMIS_22840 505372d12d8664c4965878fbcb973ab5 412 Gene3D G3DSA:1.10.3930.10 69 153 2.8E-147 T 14-10-2018 AMIS_22840 505372d12d8664c4965878fbcb973ab5 412 TIGRFAM TIGR01078 arcA: arginine deiminase 7 410 1.8E-147 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AMIS_22840 505372d12d8664c4965878fbcb973ab5 412 PRINTS PR01466 Bacterial arginine deiminase signature 346 363 4.2E-48 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AMIS_22840 505372d12d8664c4965878fbcb973ab5 412 PRINTS PR01466 Bacterial arginine deiminase signature 389 407 4.2E-48 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AMIS_22840 505372d12d8664c4965878fbcb973ab5 412 PRINTS PR01466 Bacterial arginine deiminase signature 182 197 4.2E-48 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AMIS_22840 505372d12d8664c4965878fbcb973ab5 412 PRINTS PR01466 Bacterial arginine deiminase signature 3 23 4.2E-48 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AMIS_22840 505372d12d8664c4965878fbcb973ab5 412 PRINTS PR01466 Bacterial arginine deiminase signature 366 380 4.2E-48 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AMIS_22840 505372d12d8664c4965878fbcb973ab5 412 PRINTS PR01466 Bacterial arginine deiminase signature 154 172 4.2E-48 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AMIS_22840 505372d12d8664c4965878fbcb973ab5 412 Gene3D G3DSA:3.75.10.10 7 407 2.8E-147 T 14-10-2018 AMIS_22840 505372d12d8664c4965878fbcb973ab5 412 Hamap MF_00242 Arginine deiminase [arcA]. 2 410 47.638 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AMIS_16260 4259d2812d167a475ae0955a833d33e2 473 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 17 464 1.1E-219 T 14-10-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 AMIS_16260 4259d2812d167a475ae0955a833d33e2 473 Pfam PF01458 Uncharacterized protein family (UPF0051) 219 444 2.4E-76 T 14-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 AMIS_16260 4259d2812d167a475ae0955a833d33e2 473 SUPERFAMILY SSF101960 40 470 6.54E-138 T 14-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily AMIS_25180 f9b001aa16ca0fbf90b8568082abcfb2 103 Pfam PF01022 Bacterial regulatory protein, arsR family 23 70 5.8E-14 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_25180 f9b001aa16ca0fbf90b8568082abcfb2 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 53 68 3.0E-19 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_25180 f9b001aa16ca0fbf90b8568082abcfb2 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 68 83 3.0E-19 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_25180 f9b001aa16ca0fbf90b8568082abcfb2 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 18 33 3.0E-19 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_25180 f9b001aa16ca0fbf90b8568082abcfb2 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 51 3.0E-19 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_25180 f9b001aa16ca0fbf90b8568082abcfb2 103 SUPERFAMILY SSF46785 6 95 5.17E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_25180 f9b001aa16ca0fbf90b8568082abcfb2 103 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 42 60 - T 14-10-2018 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 AMIS_25180 f9b001aa16ca0fbf90b8568082abcfb2 103 Gene3D G3DSA:1.10.10.10 1 99 2.5E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_25180 f9b001aa16ca0fbf90b8568082abcfb2 103 SMART SM00418 16 93 3.5E-28 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_32800 8cbb02e06ff1b8a068b30e0fca846184 247 Gene3D G3DSA:3.40.50.720 1 246 5.0E-79 T 14-10-2018 AMIS_32800 8cbb02e06ff1b8a068b30e0fca846184 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 3.6E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_32800 8cbb02e06ff1b8a068b30e0fca846184 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 3.6E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_32800 8cbb02e06ff1b8a068b30e0fca846184 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 3.6E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_32800 8cbb02e06ff1b8a068b30e0fca846184 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 3.6E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_32800 8cbb02e06ff1b8a068b30e0fca846184 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 3.6E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_32800 8cbb02e06ff1b8a068b30e0fca846184 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 3.6E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_32800 8cbb02e06ff1b8a068b30e0fca846184 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMIS_32800 8cbb02e06ff1b8a068b30e0fca846184 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 246 6.4E-61 T 14-10-2018 AMIS_32800 8cbb02e06ff1b8a068b30e0fca846184 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 7.3E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_32800 8cbb02e06ff1b8a068b30e0fca846184 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 7.3E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_32800 8cbb02e06ff1b8a068b30e0fca846184 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 7.3E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_32800 8cbb02e06ff1b8a068b30e0fca846184 247 SUPERFAMILY SSF51735 6 247 7.72E-79 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_71050 35d7875e8ee37afec396a3dff375ec91 279 Pfam PF12698 ABC-2 family transporter protein 58 245 1.5E-18 T 14-10-2018 AMIS_73830 c332f050d4c122dda803d0aa2e8ac72e 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 2.2E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_73830 c332f050d4c122dda803d0aa2e8ac72e 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.2E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_73830 c332f050d4c122dda803d0aa2e8ac72e 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 2.2E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_73830 c332f050d4c122dda803d0aa2e8ac72e 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.2E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_73830 c332f050d4c122dda803d0aa2e8ac72e 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 2.2E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_73830 c332f050d4c122dda803d0aa2e8ac72e 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 2.2E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_73830 c332f050d4c122dda803d0aa2e8ac72e 249 Gene3D G3DSA:3.40.50.720 1 248 2.1E-70 T 14-10-2018 AMIS_73830 c332f050d4c122dda803d0aa2e8ac72e 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 243 7.0E-57 T 14-10-2018 AMIS_73830 c332f050d4c122dda803d0aa2e8ac72e 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMIS_73830 c332f050d4c122dda803d0aa2e8ac72e 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 1.0E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_73830 c332f050d4c122dda803d0aa2e8ac72e 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.0E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_73830 c332f050d4c122dda803d0aa2e8ac72e 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.0E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_73830 c332f050d4c122dda803d0aa2e8ac72e 249 SUPERFAMILY SSF51735 3 245 5.43E-74 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_55890 1cdbf500e28017aa182c02d1504d2966 203 Gene3D G3DSA:1.10.357.10 66 195 6.6E-41 T 14-10-2018 AMIS_55890 1cdbf500e28017aa182c02d1504d2966 203 Gene3D G3DSA:1.10.10.60 5 65 1.3E-26 T 14-10-2018 AMIS_55890 1cdbf500e28017aa182c02d1504d2966 203 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 64 4.8E-14 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_55890 1cdbf500e28017aa182c02d1504d2966 203 SUPERFAMILY SSF48498 84 195 1.47E-26 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_55890 1cdbf500e28017aa182c02d1504d2966 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 1.1E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_55890 1cdbf500e28017aa182c02d1504d2966 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 1.1E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_55890 1cdbf500e28017aa182c02d1504d2966 203 SUPERFAMILY SSF46689 4 82 3.39E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_33370 255d4d477432e27df827eab6c4bcea19 258 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_33370 255d4d477432e27df827eab6c4bcea19 258 Pfam PF00005 ABC transporter 19 167 8.5E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_33370 255d4d477432e27df827eab6c4bcea19 258 PIRSF PIRSF039085 1 243 3.7E-113 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AMIS_33370 255d4d477432e27df827eab6c4bcea19 258 SMART SM00382 28 215 2.4E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_33370 255d4d477432e27df827eab6c4bcea19 258 SUPERFAMILY SSF52540 4 237 3.71E-79 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_33370 255d4d477432e27df827eab6c4bcea19 258 Gene3D G3DSA:3.40.50.300 2 256 2.0E-78 T 14-10-2018 AMIS_22540 4094127d83c7e7cc3a21e6493c8fb104 285 Gene3D G3DSA:1.10.287.70 124 234 8.0E-21 T 14-10-2018 AMIS_22540 4094127d83c7e7cc3a21e6493c8fb104 285 SUPERFAMILY SSF81324 16 233 1.96E-23 T 14-10-2018 AMIS_22540 4094127d83c7e7cc3a21e6493c8fb104 285 PRINTS PR00169 Potassium channel signature 52 75 9.9E-6 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AMIS_22540 4094127d83c7e7cc3a21e6493c8fb104 285 PRINTS PR00169 Potassium channel signature 109 135 9.9E-6 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AMIS_22540 4094127d83c7e7cc3a21e6493c8fb104 285 PRINTS PR00169 Potassium channel signature 10 38 9.9E-6 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AMIS_22540 4094127d83c7e7cc3a21e6493c8fb104 285 Gene3D G3DSA:1.20.120.350 7 123 9.6E-23 T 14-10-2018 IPR027359 Voltage-dependent channel domain superfamily AMIS_22540 4094127d83c7e7cc3a21e6493c8fb104 285 Pfam PF00520 Ion transport protein 17 236 2.5E-37 T 14-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 AMIS_29180 9095e4edeed24431aabce1d76b1ecca1 175 Pfam PF04234 CopC domain 24 117 3.4E-23 T 14-10-2018 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 AMIS_29180 9095e4edeed24431aabce1d76b1ecca1 175 Gene3D G3DSA:2.60.40.1220 24 121 7.9E-27 T 14-10-2018 AMIS_29180 9095e4edeed24431aabce1d76b1ecca1 175 SUPERFAMILY SSF81296 23 117 2.62E-23 T 14-10-2018 IPR014756 Immunoglobulin E-set AMIS_66200 f0e88afc84d1f3225c0ea425f770f6be 278 Pfam PF00005 ABC transporter 21 157 2.2E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_66200 f0e88afc84d1f3225c0ea425f770f6be 278 SUPERFAMILY SSF52540 3 217 2.56E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_66200 f0e88afc84d1f3225c0ea425f770f6be 278 SMART SM00382 28 205 4.4E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_66200 f0e88afc84d1f3225c0ea425f770f6be 278 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_66200 f0e88afc84d1f3225c0ea425f770f6be 278 Gene3D G3DSA:3.40.50.300 1 230 3.1E-63 T 14-10-2018 AMIS_9990 086147c34736d4fc48f7c87c284f5e16 405 Gene3D G3DSA:3.30.420.40 222 378 1.8E-47 T 14-10-2018 AMIS_9990 086147c34736d4fc48f7c87c284f5e16 405 SUPERFAMILY SSF53067 96 394 6.48E-26 T 14-10-2018 AMIS_9990 086147c34736d4fc48f7c87c284f5e16 405 Gene3D G3DSA:3.30.420.40 102 387 1.8E-47 T 14-10-2018 AMIS_9990 086147c34736d4fc48f7c87c284f5e16 405 Pfam PF09339 IclR helix-turn-helix domain 28 71 8.4E-5 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AMIS_9990 086147c34736d4fc48f7c87c284f5e16 405 Gene3D G3DSA:1.10.10.10 13 89 4.7E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_9990 086147c34736d4fc48f7c87c284f5e16 405 SUPERFAMILY SSF46785 22 82 6.52E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_9990 086147c34736d4fc48f7c87c284f5e16 405 Pfam PF00480 ROK family 140 388 3.3E-21 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AMIS_16640 3448814f3a9d1872ad97918ada3c3f3a 414 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 64 194 1.4E-61 T 14-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 AMIS_16640 3448814f3a9d1872ad97918ada3c3f3a 414 Gene3D G3DSA:1.10.8.300 224 340 1.2E-34 T 14-10-2018 AMIS_16640 3448814f3a9d1872ad97918ada3c3f3a 414 Gene3D G3DSA:3.40.50.300 28 223 5.5E-47 T 14-10-2018 AMIS_16640 3448814f3a9d1872ad97918ada3c3f3a 414 SUPERFAMILY SSF52540 40 315 5.56E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_40550 ad52d50a187b2f6b168be91dcebf87d0 149 SUPERFAMILY SSF52172 9 136 5.27E-33 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_40550 ad52d50a187b2f6b168be91dcebf87d0 149 Gene3D G3DSA:3.40.50.2300 4 146 2.3E-35 T 14-10-2018 AMIS_40550 ad52d50a187b2f6b168be91dcebf87d0 149 Pfam PF00072 Response regulator receiver domain 10 130 1.9E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_40550 ad52d50a187b2f6b168be91dcebf87d0 149 SMART SM00448 8 130 6.3E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_76630 846eaddef62966b1e505d4645d428108 334 Gene3D G3DSA:3.40.50.2300 168 294 4.9E-73 T 14-10-2018 AMIS_76630 846eaddef62966b1e505d4645d428108 334 SUPERFAMILY SSF47413 6 64 1.45E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_76630 846eaddef62966b1e505d4645d428108 334 Gene3D G3DSA:1.10.260.40 1 60 1.4E-20 T 14-10-2018 AMIS_76630 846eaddef62966b1e505d4645d428108 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 18 28 9.0E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_76630 846eaddef62966b1e505d4645d428108 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 8 18 9.0E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_76630 846eaddef62966b1e505d4645d428108 334 SMART SM00354 6 76 1.8E-28 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_76630 846eaddef62966b1e505d4645d428108 334 Pfam PF13377 Periplasmic binding protein-like domain 176 333 1.3E-40 T 14-10-2018 AMIS_76630 846eaddef62966b1e505d4645d428108 334 SUPERFAMILY SSF53822 81 333 5.89E-67 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_76630 846eaddef62966b1e505d4645d428108 334 Gene3D G3DSA:3.40.50.2300 61 311 4.9E-73 T 14-10-2018 AMIS_76630 846eaddef62966b1e505d4645d428108 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 53 2.3E-15 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_50000 3e98cd28104b6fa502ff24cc4cffd5dd 427 Gene3D G3DSA:1.25.40.10 2 76 1.4E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_50000 3e98cd28104b6fa502ff24cc4cffd5dd 427 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 185 311 1.3E-41 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMIS_50000 3e98cd28104b6fa502ff24cc4cffd5dd 427 SUPERFAMILY SSF52540 145 393 2.1E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_50000 3e98cd28104b6fa502ff24cc4cffd5dd 427 Gene3D G3DSA:1.10.8.60 316 390 4.3E-81 T 14-10-2018 AMIS_50000 3e98cd28104b6fa502ff24cc4cffd5dd 427 SUPERFAMILY SSF48452 8 65 2.49E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_50000 3e98cd28104b6fa502ff24cc4cffd5dd 427 SMART SM00382 181 317 4.7E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_50000 3e98cd28104b6fa502ff24cc4cffd5dd 427 Gene3D G3DSA:3.40.50.300 145 395 4.3E-81 T 14-10-2018 AMIS_50000 3e98cd28104b6fa502ff24cc4cffd5dd 427 ProSitePatterns PS00674 AAA-protein family signature. 285 303 - T 14-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 AMIS_44010 86d874a760ab38bd0f5943fbf801727e 332 SUPERFAMILY SSF54506 7 329 5.69E-82 T 14-10-2018 AMIS_44010 86d874a760ab38bd0f5943fbf801727e 332 Pfam PF05544 Proline racemase 12 330 8.5E-81 T 14-10-2018 IPR008794 Proline racemase family AMIS_44010 86d874a760ab38bd0f5943fbf801727e 332 PIRSF PIRSF029792 5 332 3.3E-84 T 14-10-2018 IPR008794 Proline racemase family AMIS_44010 86d874a760ab38bd0f5943fbf801727e 332 Gene3D G3DSA:3.10.310.10 151 308 4.0E-106 T 14-10-2018 AMIS_44010 86d874a760ab38bd0f5943fbf801727e 332 Gene3D G3DSA:3.10.310.10 11 331 4.0E-106 T 14-10-2018 AMIS_65840 ff662e9fe9fc9a28b66824d50c6d50dd 413 PIRSF PIRSF038800 2 413 1.3E-144 T 14-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 AMIS_65840 ff662e9fe9fc9a28b66824d50c6d50dd 413 Gene3D G3DSA:3.40.640.10 45 308 1.7E-130 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_65840 ff662e9fe9fc9a28b66824d50c6d50dd 413 Pfam PF00266 Aminotransferase class-V 115 324 1.1E-23 T 14-10-2018 IPR000192 Aminotransferase class V domain AMIS_65840 ff662e9fe9fc9a28b66824d50c6d50dd 413 SUPERFAMILY SSF53383 6 412 6.05E-77 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_65840 ff662e9fe9fc9a28b66824d50c6d50dd 413 Hamap MF_01970 Kynureninase [kynU]. 1 409 33.093 T 14-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 AMIS_65840 ff662e9fe9fc9a28b66824d50c6d50dd 413 Gene3D G3DSA:3.90.1150.10 11 408 1.7E-130 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMIS_65840 ff662e9fe9fc9a28b66824d50c6d50dd 413 TIGRFAM TIGR01814 kynureninase: kynureninase 9 410 5.6E-78 T 14-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 AMIS_20 b4e36bd207c40f8b3497374de86040ba 377 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 250 373 9.6E-26 T 14-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 AMIS_20 b4e36bd207c40f8b3497374de86040ba 377 Gene3D G3DSA:3.10.150.10 123 252 4.7E-31 T 14-10-2018 AMIS_20 b4e36bd207c40f8b3497374de86040ba 377 SUPERFAMILY SSF55979 250 375 4.85E-26 T 14-10-2018 AMIS_20 b4e36bd207c40f8b3497374de86040ba 377 Pfam PF02767 DNA polymerase III beta subunit, central domain 127 247 3.7E-27 T 14-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 AMIS_20 b4e36bd207c40f8b3497374de86040ba 377 Gene3D G3DSA:3.10.150.10 253 377 1.3E-35 T 14-10-2018 AMIS_20 b4e36bd207c40f8b3497374de86040ba 377 SMART SM00480 17 371 1.2E-104 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 AMIS_20 b4e36bd207c40f8b3497374de86040ba 377 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 374 1.7E-82 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 AMIS_20 b4e36bd207c40f8b3497374de86040ba 377 SUPERFAMILY SSF55979 1 118 1.6E-23 T 14-10-2018 AMIS_20 b4e36bd207c40f8b3497374de86040ba 377 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 118 1.2E-34 T 14-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 AMIS_20 b4e36bd207c40f8b3497374de86040ba 377 PIRSF PIRSF000804 1 376 7.3E-88 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 AMIS_20 b4e36bd207c40f8b3497374de86040ba 377 SUPERFAMILY SSF55979 126 249 7.99E-18 T 14-10-2018 AMIS_20 b4e36bd207c40f8b3497374de86040ba 377 Gene3D G3DSA:3.10.150.10 1 121 1.9E-41 T 14-10-2018 AMIS_74290 5b66e88fc5d53054976d7a227b63c41f 355 PIRSF PIRSF004532 26 346 6.6E-145 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 AMIS_74290 5b66e88fc5d53054976d7a227b63c41f 355 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 28 335 6.5E-142 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 AMIS_74290 5b66e88fc5d53054976d7a227b63c41f 355 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 27 339 3.6E-112 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 AMIS_74290 5b66e88fc5d53054976d7a227b63c41f 355 Gene3D G3DSA:3.30.540.10 32 335 9.6E-132 T 14-10-2018 AMIS_74290 5b66e88fc5d53054976d7a227b63c41f 355 Gene3D G3DSA:3.40.190.90 148 309 9.6E-132 T 14-10-2018 AMIS_74290 5b66e88fc5d53054976d7a227b63c41f 355 SUPERFAMILY SSF56655 26 338 7.33E-112 T 14-10-2018 AMIS_61230 5663df83c8c497fe6cc0913385f1b0d4 271 Pfam PF00188 Cysteine-rich secretory protein family 140 269 7.9E-11 T 14-10-2018 IPR014044 CAP domain AMIS_61230 5663df83c8c497fe6cc0913385f1b0d4 271 Gene3D G3DSA:3.40.33.10 72 270 7.7E-36 T 14-10-2018 IPR035940 CAP superfamily AMIS_61230 5663df83c8c497fe6cc0913385f1b0d4 271 SUPERFAMILY SSF55797 133 269 2.09E-15 T 14-10-2018 IPR035940 CAP superfamily AMIS_12430 888504a3f93fa59758f623bbd62a3a72 285 PRINTS PR00783 Major intrinsic protein family signature 8 27 1.9E-14 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AMIS_12430 888504a3f93fa59758f623bbd62a3a72 285 PRINTS PR00783 Major intrinsic protein family signature 50 74 1.9E-14 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AMIS_12430 888504a3f93fa59758f623bbd62a3a72 285 PRINTS PR00783 Major intrinsic protein family signature 135 153 1.9E-14 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AMIS_12430 888504a3f93fa59758f623bbd62a3a72 285 SUPERFAMILY SSF81338 2 232 2.71E-31 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AMIS_12430 888504a3f93fa59758f623bbd62a3a72 285 Gene3D G3DSA:1.20.1080.10 1 179 5.3E-26 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AMIS_12430 888504a3f93fa59758f623bbd62a3a72 285 Pfam PF00230 Major intrinsic protein 2 168 8.2E-18 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AMIS_32540 95ba36dc5ca3738507f2536b77cfa43e 83 Gene3D G3DSA:3.30.70.1060 3 72 1.0E-13 T 14-10-2018 AMIS_32540 95ba36dc5ca3738507f2536b77cfa43e 83 SUPERFAMILY SSF54909 4 67 7.24E-8 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel AMIS_32540 95ba36dc5ca3738507f2536b77cfa43e 83 Pfam PF03795 YCII-related domain 4 69 2.6E-9 T 14-10-2018 IPR005545 YCII-related AMIS_80070 a12df58ec57a39ed0f8985d62fd18497 288 SUPERFAMILY SSF52518 1 159 5.3E-34 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold AMIS_80070 a12df58ec57a39ed0f8985d62fd18497 288 SUPERFAMILY SSF52922 168 286 2.71E-7 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AMIS_80070 a12df58ec57a39ed0f8985d62fd18497 288 Gene3D G3DSA:3.40.50.970 1 169 1.5E-39 T 14-10-2018 AMIS_80070 a12df58ec57a39ed0f8985d62fd18497 288 SMART SM00861 1 164 3.7E-14 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AMIS_80070 a12df58ec57a39ed0f8985d62fd18497 288 Gene3D G3DSA:3.40.50.920 170 288 1.6E-6 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AMIS_80070 a12df58ec57a39ed0f8985d62fd18497 288 Pfam PF02779 Transketolase, pyrimidine binding domain 5 161 6.6E-21 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AMIS_7170 21b786ca914577c8c8049aeaa3abba73 293 SUPERFAMILY SSF51735 1 128 1.26E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_7170 21b786ca914577c8c8049aeaa3abba73 293 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 158 185 - T 14-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site AMIS_7170 21b786ca914577c8c8049aeaa3abba73 293 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 292 39.187 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AMIS_7170 21b786ca914577c8c8049aeaa3abba73 293 Gene3D G3DSA:3.40.50.720 1 129 6.8E-47 T 14-10-2018 AMIS_7170 21b786ca914577c8c8049aeaa3abba73 293 PIRSF PIRSF001553 1 293 2.2E-116 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AMIS_7170 21b786ca914577c8c8049aeaa3abba73 293 Pfam PF02629 CoA binding domain 6 103 2.9E-25 T 14-10-2018 IPR003781 CoA-binding GO:0048037 AMIS_7170 21b786ca914577c8c8049aeaa3abba73 293 SMART SM00881 4 104 6.4E-31 T 14-10-2018 IPR003781 CoA-binding GO:0048037 AMIS_7170 21b786ca914577c8c8049aeaa3abba73 293 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 240 253 - T 14-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site AMIS_7170 21b786ca914577c8c8049aeaa3abba73 293 Pfam PF00549 CoA-ligase 158 275 2.8E-15 T 14-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AMIS_7170 21b786ca914577c8c8049aeaa3abba73 293 PRINTS PR01798 Succinyl-CoA synthase signature 212 225 2.5E-35 T 14-10-2018 AMIS_7170 21b786ca914577c8c8049aeaa3abba73 293 PRINTS PR01798 Succinyl-CoA synthase signature 86 103 2.5E-35 T 14-10-2018 AMIS_7170 21b786ca914577c8c8049aeaa3abba73 293 PRINTS PR01798 Succinyl-CoA synthase signature 181 199 2.5E-35 T 14-10-2018 AMIS_7170 21b786ca914577c8c8049aeaa3abba73 293 PRINTS PR01798 Succinyl-CoA synthase signature 244 261 2.5E-35 T 14-10-2018 AMIS_7170 21b786ca914577c8c8049aeaa3abba73 293 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 291 1.3E-126 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AMIS_7170 21b786ca914577c8c8049aeaa3abba73 293 Gene3D G3DSA:3.40.50.261 130 293 4.2E-61 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AMIS_7170 21b786ca914577c8c8049aeaa3abba73 293 SUPERFAMILY SSF52210 129 291 9.81E-48 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AMIS_5660 277caf0cc60d503141c3bcb76618e32f 134 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 7 112 8.6E-22 T 14-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like AMIS_5660 277caf0cc60d503141c3bcb76618e32f 134 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 1 120 16.954 T 14-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 AMIS_13380 29dfb24d39a7c7a545fbe44dbbd2a651 302 SUPERFAMILY SSF53686 3 294 2.1E-72 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMIS_13380 29dfb24d39a7c7a545fbe44dbbd2a651 302 Gene3D G3DSA:3.40.50.1100 7 297 1.3E-82 T 14-10-2018 AMIS_13380 29dfb24d39a7c7a545fbe44dbbd2a651 302 Gene3D G3DSA:3.40.50.1100 43 138 1.3E-82 T 14-10-2018 AMIS_13380 29dfb24d39a7c7a545fbe44dbbd2a651 302 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 17 293 1.7E-66 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AMIS_1540 3dbc1ac5fe026296d58b2b1fc11106f8 72 SUPERFAMILY SSF54786 4 70 1.18E-17 T 14-10-2018 AMIS_1540 3dbc1ac5fe026296d58b2b1fc11106f8 72 Gene3D G3DSA:3.30.920.30 6 71 9.6E-22 T 14-10-2018 IPR038570 HicA superfamily AMIS_1540 3dbc1ac5fe026296d58b2b1fc11106f8 72 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 10 65 3.3E-18 T 14-10-2018 IPR012933 HicA mRNA interferase family GO:0003729 AMIS_60690 7b84476fe69e0f63025446d46c2067f2 754 Gene3D G3DSA:3.30.70.270 329 488 8.8E-39 T 14-10-2018 AMIS_60690 7b84476fe69e0f63025446d46c2067f2 754 SUPERFAMILY SSF55073 340 484 1.18E-32 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_60690 7b84476fe69e0f63025446d46c2067f2 754 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 331 483 3.7E-21 T 14-10-2018 IPR000160 GGDEF domain AMIS_60690 7b84476fe69e0f63025446d46c2067f2 754 Gene3D G3DSA:3.20.20.450 497 751 7.8E-92 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_60690 7b84476fe69e0f63025446d46c2067f2 754 SMART SM00052 496 742 1.2E-104 T 14-10-2018 IPR001633 EAL domain AMIS_60690 7b84476fe69e0f63025446d46c2067f2 754 Pfam PF00990 Diguanylate cyclase, GGDEF domain 335 482 3.0E-30 T 14-10-2018 IPR000160 GGDEF domain AMIS_60690 7b84476fe69e0f63025446d46c2067f2 754 SMART SM00267 324 486 3.7E-39 T 14-10-2018 IPR000160 GGDEF domain AMIS_60690 7b84476fe69e0f63025446d46c2067f2 754 SUPERFAMILY SSF141868 503 749 2.88E-80 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_60690 7b84476fe69e0f63025446d46c2067f2 754 Pfam PF00563 EAL domain 502 737 1.2E-69 T 14-10-2018 IPR001633 EAL domain AMIS_45620 207d24cf586c2a1aa054e8b4bd912f49 744 Gene3D G3DSA:1.10.520.10 42 443 8.9E-209 T 14-10-2018 AMIS_45620 207d24cf586c2a1aa054e8b4bd912f49 744 PRINTS PR00458 Haem peroxidase superfamily signature 169 186 2.4E-18 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AMIS_45620 207d24cf586c2a1aa054e8b4bd912f49 744 PRINTS PR00458 Haem peroxidase superfamily signature 109 123 2.4E-18 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AMIS_45620 207d24cf586c2a1aa054e8b4bd912f49 744 PRINTS PR00458 Haem peroxidase superfamily signature 272 287 2.4E-18 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AMIS_45620 207d24cf586c2a1aa054e8b4bd912f49 744 PRINTS PR00458 Haem peroxidase superfamily signature 187 199 2.4E-18 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AMIS_45620 207d24cf586c2a1aa054e8b4bd912f49 744 PRINTS PR00458 Haem peroxidase superfamily signature 332 347 2.4E-18 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AMIS_45620 207d24cf586c2a1aa054e8b4bd912f49 744 ProSitePatterns PS00435 Peroxidases proximal heme-ligand signature. 272 282 - T 14-10-2018 IPR019793 Peroxidases heam-ligand binding site Reactome: R-HSA-2408557 AMIS_45620 207d24cf586c2a1aa054e8b4bd912f49 744 Gene3D G3DSA:1.10.420.10 597 719 5.5E-140 T 14-10-2018 AMIS_45620 207d24cf586c2a1aa054e8b4bd912f49 744 SUPERFAMILY SSF48113 443 743 8.69E-105 T 14-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 AMIS_45620 207d24cf586c2a1aa054e8b4bd912f49 744 Pfam PF00141 Peroxidase 473 718 2.6E-39 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AMIS_45620 207d24cf586c2a1aa054e8b4bd912f49 744 Pfam PF00141 Peroxidase 103 409 1.6E-45 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AMIS_45620 207d24cf586c2a1aa054e8b4bd912f49 744 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 41 744 0.0 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AMIS_45620 207d24cf586c2a1aa054e8b4bd912f49 744 ProSitePatterns PS00436 Peroxidases active site signature. 109 120 - T 14-10-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 AMIS_45620 207d24cf586c2a1aa054e8b4bd912f49 744 Gene3D G3DSA:1.10.520.10 446 743 5.5E-140 T 14-10-2018 AMIS_45620 207d24cf586c2a1aa054e8b4bd912f49 744 Gene3D G3DSA:1.10.420.20 209 411 8.9E-209 T 14-10-2018 AMIS_45620 207d24cf586c2a1aa054e8b4bd912f49 744 Hamap MF_01961 Catalase-peroxidase [katG]. 7 744 40.213 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AMIS_45620 207d24cf586c2a1aa054e8b4bd912f49 744 SUPERFAMILY SSF48113 42 443 1.33E-146 T 14-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 AMIS_45620 207d24cf586c2a1aa054e8b4bd912f49 744 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 45 67 1.1E-46 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AMIS_45620 207d24cf586c2a1aa054e8b4bd912f49 744 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 86 111 1.1E-46 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AMIS_45620 207d24cf586c2a1aa054e8b4bd912f49 744 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 493 519 1.1E-46 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AMIS_45620 207d24cf586c2a1aa054e8b4bd912f49 744 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 71 84 1.1E-46 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AMIS_45620 207d24cf586c2a1aa054e8b4bd912f49 744 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 280 303 1.1E-46 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AMIS_78130 52f58dd5d527594190dd3c34493d131b 392 PRINTS PR00834 HtrA/DegQ protease family signature 323 340 3.2E-5 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMIS_78130 52f58dd5d527594190dd3c34493d131b 392 PRINTS PR00834 HtrA/DegQ protease family signature 224 236 3.2E-5 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMIS_78130 52f58dd5d527594190dd3c34493d131b 392 PRINTS PR00834 HtrA/DegQ protease family signature 244 264 3.2E-5 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMIS_78130 52f58dd5d527594190dd3c34493d131b 392 Gene3D G3DSA:2.40.10.10 275 378 1.7E-18 T 14-10-2018 AMIS_78130 52f58dd5d527594190dd3c34493d131b 392 SUPERFAMILY SSF50494 191 375 2.74E-32 T 14-10-2018 IPR009003 Peptidase S1, PA clan AMIS_78130 52f58dd5d527594190dd3c34493d131b 392 Gene3D G3DSA:2.40.10.10 183 273 3.7E-20 T 14-10-2018 AMIS_78130 52f58dd5d527594190dd3c34493d131b 392 Pfam PF02674 Colicin V production protein 4 145 8.4E-15 T 14-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 AMIS_78130 52f58dd5d527594190dd3c34493d131b 392 Pfam PF13365 Trypsin-like peptidase domain 216 352 3.1E-19 T 14-10-2018 AMIS_42790 f813f97a0f4fc5b7dab8e9a91d148a86 282 Gene3D G3DSA:3.20.20.30 122 277 1.2E-11 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_42790 f813f97a0f4fc5b7dab8e9a91d148a86 282 Gene3D G3DSA:3.20.20.30 18 121 1.1E-9 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_42790 f813f97a0f4fc5b7dab8e9a91d148a86 282 TIGRFAM TIGR03620 F420_MSMEG_4141: probable F420-dependent oxidoreductase, MSMEG_4141 family 9 275 3.1E-102 T 14-10-2018 IPR019922 Luciferase-like, F420-dependent oxidoreductase, MSMEG4141, predicted AMIS_42790 f813f97a0f4fc5b7dab8e9a91d148a86 282 Pfam PF00296 Luciferase-like monooxygenase 22 106 8.3E-8 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMIS_42790 f813f97a0f4fc5b7dab8e9a91d148a86 282 SUPERFAMILY SSF51679 21 275 3.7E-31 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_58960 58f35c47b7ddbb203718bbd3da150a2b 741 PIRSF PIRSF000379 1 741 0.0 T 14-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 AMIS_58960 58f35c47b7ddbb203718bbd3da150a2b 741 SUPERFAMILY SSF51998 2 740 7.32E-264 T 14-10-2018 AMIS_58960 58f35c47b7ddbb203718bbd3da150a2b 741 Pfam PF01228 Glycine radical 616 722 6.1E-41 T 14-10-2018 IPR001150 Glycine radical domain GO:0003824 AMIS_58960 58f35c47b7ddbb203718bbd3da150a2b 741 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 3 740 0.0 T 14-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 AMIS_58960 58f35c47b7ddbb203718bbd3da150a2b 741 Pfam PF02901 Pyruvate formate lyase-like 15 600 1.0E-189 T 14-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 AMIS_58960 58f35c47b7ddbb203718bbd3da150a2b 741 ProSitePatterns PS00850 Glycine radical domain signature. 711 719 - T 14-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site AMIS_58960 58f35c47b7ddbb203718bbd3da150a2b 741 Gene3D G3DSA:3.20.70.20 1 741 7.2E-286 T 14-10-2018 AMIS_61080 ed2abc2d46b210aa5c2508f9d1330df5 418 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 4 416 1.8E-110 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AMIS_61080 ed2abc2d46b210aa5c2508f9d1330df5 418 Pfam PF00579 tRNA synthetases class I (W and Y) 31 320 1.0E-75 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMIS_61080 ed2abc2d46b210aa5c2508f9d1330df5 418 Gene3D G3DSA:3.40.50.620 1 219 2.9E-77 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMIS_61080 ed2abc2d46b210aa5c2508f9d1330df5 418 Gene3D G3DSA:3.10.290.10 324 418 7.4E-23 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AMIS_61080 ed2abc2d46b210aa5c2508f9d1330df5 418 SUPERFAMILY SSF52374 3 320 3.13E-98 T 14-10-2018 AMIS_61080 ed2abc2d46b210aa5c2508f9d1330df5 418 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 39 49 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMIS_61080 ed2abc2d46b210aa5c2508f9d1330df5 418 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 1 416 42.987 T 14-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 AMIS_61080 ed2abc2d46b210aa5c2508f9d1330df5 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 43 65 1.5E-25 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AMIS_61080 ed2abc2d46b210aa5c2508f9d1330df5 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 213 225 1.5E-25 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AMIS_61080 ed2abc2d46b210aa5c2508f9d1330df5 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 159 174 1.5E-25 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AMIS_61080 ed2abc2d46b210aa5c2508f9d1330df5 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 180 202 1.5E-25 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AMIS_61080 ed2abc2d46b210aa5c2508f9d1330df5 418 SUPERFAMILY SSF55174 323 415 1.15E-14 T 14-10-2018 AMIS_61080 ed2abc2d46b210aa5c2508f9d1330df5 418 Gene3D G3DSA:1.10.240.10 220 323 1.4E-36 T 14-10-2018 AMIS_6090 03f068880eb415a9d621a27787b29ca4 283 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 208 2.7E-91 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 AMIS_6090 03f068880eb415a9d621a27787b29ca4 283 Gene3D G3DSA:3.30.300.20 17 106 1.3E-30 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta AMIS_6090 03f068880eb415a9d621a27787b29ca4 283 SUPERFAMILY SSF54821 106 206 4.97E-35 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_6090 03f068880eb415a9d621a27787b29ca4 283 Gene3D G3DSA:3.30.1140.32 107 208 2.1E-37 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_6090 03f068880eb415a9d621a27787b29ca4 283 Pfam PF07650 KH domain 37 109 2.9E-19 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_6090 03f068880eb415a9d621a27787b29ca4 283 Pfam PF00189 Ribosomal protein S3, C-terminal domain 119 202 1.7E-34 T 14-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_6090 03f068880eb415a9d621a27787b29ca4 283 SMART SM00322 59 124 2.8E-7 T 14-10-2018 IPR004087 K Homology domain GO:0003676 AMIS_6090 03f068880eb415a9d621a27787b29ca4 283 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 37.479 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 AMIS_6090 03f068880eb415a9d621a27787b29ca4 283 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 14-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_6090 03f068880eb415a9d621a27787b29ca4 283 SUPERFAMILY SSF54814 2 105 3.66E-35 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 AMIS_60010 d0acaa86ccf0f4b99534bf561ece769a 381 Gene3D G3DSA:3.30.420.40 191 355 1.4E-58 T 14-10-2018 AMIS_60010 d0acaa86ccf0f4b99534bf561ece769a 381 Gene3D G3DSA:3.30.420.40 87 365 1.4E-58 T 14-10-2018 AMIS_60010 d0acaa86ccf0f4b99534bf561ece769a 381 Pfam PF00480 ROK family 86 370 8.1E-39 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AMIS_60010 d0acaa86ccf0f4b99534bf561ece769a 381 ProSitePatterns PS01125 ROK family signature. 201 228 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AMIS_60010 d0acaa86ccf0f4b99534bf561ece769a 381 Gene3D G3DSA:1.10.10.10 12 76 1.2E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_60010 d0acaa86ccf0f4b99534bf561ece769a 381 SUPERFAMILY SSF53067 83 371 5.99E-42 T 14-10-2018 AMIS_60010 d0acaa86ccf0f4b99534bf561ece769a 381 SUPERFAMILY SSF46785 14 70 2.62E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_61170 aa62fc34679ee70a16a366c200631be1 253 SMART SM00420 6 58 7.8E-14 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AMIS_61170 aa62fc34679ee70a16a366c200631be1 253 Pfam PF08220 DeoR-like helix-turn-helix domain 6 57 4.1E-15 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AMIS_61170 aa62fc34679ee70a16a366c200631be1 253 SUPERFAMILY SSF100950 76 235 1.26E-28 T 14-10-2018 IPR037171 NagB/RpiA transferase-like AMIS_61170 aa62fc34679ee70a16a366c200631be1 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.1E-8 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AMIS_61170 aa62fc34679ee70a16a366c200631be1 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.1E-8 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AMIS_61170 aa62fc34679ee70a16a366c200631be1 253 Pfam PF00455 DeoR C terminal sensor domain 77 233 1.5E-49 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain AMIS_61170 aa62fc34679ee70a16a366c200631be1 253 SMART SM01134 73 234 1.1E-68 T 14-10-2018 AMIS_61170 aa62fc34679ee70a16a366c200631be1 253 SUPERFAMILY SSF46785 4 61 7.39E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_45800 6cf4bfbc8647b67374d9ad09a3116c13 378 Pfam PF02515 CoA-transferase family III 9 368 9.0E-116 T 14-10-2018 IPR003673 CoA-transferase family III GO:0003824 AMIS_45800 6cf4bfbc8647b67374d9ad09a3116c13 378 Gene3D G3DSA:3.30.1540.10 228 319 6.8E-126 T 14-10-2018 AMIS_45800 6cf4bfbc8647b67374d9ad09a3116c13 378 Gene3D G3DSA:3.40.50.10540 8 352 6.8E-126 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily AMIS_45800 6cf4bfbc8647b67374d9ad09a3116c13 378 SUPERFAMILY SSF89796 7 376 5.36E-125 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily AMIS_77660 aa13e186fe13781c7049755dcaccfedb 166 PIRSF PIRSF028103 82 165 9.6E-9 T 14-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 AMIS_77660 aa13e186fe13781c7049755dcaccfedb 166 PIRSF PIRSF028103 1 120 3.0E-17 T 14-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 AMIS_77660 aa13e186fe13781c7049755dcaccfedb 166 Pfam PF13740 ACT domain 87 157 3.7E-8 T 14-10-2018 AMIS_77660 aa13e186fe13781c7049755dcaccfedb 166 Pfam PF13740 ACT domain 4 59 1.1E-10 T 14-10-2018 AMIS_77660 aa13e186fe13781c7049755dcaccfedb 166 SUPERFAMILY SSF55021 85 161 1.71E-13 T 14-10-2018 AMIS_77660 aa13e186fe13781c7049755dcaccfedb 166 Gene3D G3DSA:3.30.70.260 2 74 1.5E-16 T 14-10-2018 AMIS_77660 aa13e186fe13781c7049755dcaccfedb 166 SUPERFAMILY SSF55021 4 73 5.67E-13 T 14-10-2018 AMIS_77660 aa13e186fe13781c7049755dcaccfedb 166 Gene3D G3DSA:3.30.70.260 84 164 4.9E-18 T 14-10-2018 AMIS_68680 f48efed6e577fac51e603f93b954fbc1 349 Gene3D G3DSA:1.10.287.950 42 300 1.3E-31 T 14-10-2018 AMIS_68680 f48efed6e577fac51e603f93b954fbc1 349 SUPERFAMILY SSF58104 43 288 1.05E-31 T 14-10-2018 AMIS_68680 f48efed6e577fac51e603f93b954fbc1 349 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 47 289 2.0E-4 T 14-10-2018 AMIS_68680 f48efed6e577fac51e603f93b954fbc1 349 SMART SM00283 43 288 6.5E-7 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_68680 f48efed6e577fac51e603f93b954fbc1 349 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 114 253 1.9E-24 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_53590 155b1aae7e9bbc11b39e31944bbb45f1 279 Hamap MF_02113_B Proteasome subunit beta [prcB]. 7 279 49.175 T 14-10-2018 IPR022483 Peptidase T1A, proteasome beta-subunit, actinobacteria GO:0004298|GO:0005839|GO:0010498 AMIS_53590 155b1aae7e9bbc11b39e31944bbb45f1 279 SUPERFAMILY SSF56235 47 268 1.99E-56 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMIS_53590 155b1aae7e9bbc11b39e31944bbb45f1 279 Pfam PF00227 Proteasome subunit 52 235 2.6E-35 T 14-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 AMIS_53590 155b1aae7e9bbc11b39e31944bbb45f1 279 Gene3D G3DSA:3.60.20.10 54 279 4.7E-85 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMIS_53590 155b1aae7e9bbc11b39e31944bbb45f1 279 TIGRFAM TIGR03690 20S_bact_beta: proteasome, beta subunit 50 273 1.8E-109 T 14-10-2018 IPR022483 Peptidase T1A, proteasome beta-subunit, actinobacteria GO:0004298|GO:0005839|GO:0010498 AMIS_840 7a73e26136a545b82405ec61e0005ba9 206 Hamap MF_01151 Protein GrpE [grpE]. 4 204 16.598 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AMIS_840 7a73e26136a545b82405ec61e0005ba9 206 SUPERFAMILY SSF58014 64 143 3.14E-15 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 AMIS_840 7a73e26136a545b82405ec61e0005ba9 206 Gene3D G3DSA:3.90.20.20 41 148 3.8E-16 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 AMIS_840 7a73e26136a545b82405ec61e0005ba9 206 Gene3D G3DSA:2.30.22.10 149 203 1.4E-19 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 AMIS_840 7a73e26136a545b82405ec61e0005ba9 206 Pfam PF01025 GrpE 49 203 1.5E-33 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AMIS_840 7a73e26136a545b82405ec61e0005ba9 206 PRINTS PR00773 GrpE protein signature 183 202 4.8E-25 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AMIS_840 7a73e26136a545b82405ec61e0005ba9 206 PRINTS PR00773 GrpE protein signature 156 171 4.8E-25 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AMIS_840 7a73e26136a545b82405ec61e0005ba9 206 PRINTS PR00773 GrpE protein signature 81 97 4.8E-25 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AMIS_840 7a73e26136a545b82405ec61e0005ba9 206 PRINTS PR00773 GrpE protein signature 109 124 4.8E-25 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AMIS_840 7a73e26136a545b82405ec61e0005ba9 206 ProSitePatterns PS01071 grpE protein signature. 159 202 - T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AMIS_840 7a73e26136a545b82405ec61e0005ba9 206 SUPERFAMILY SSF51064 151 204 6.02E-17 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 AMIS_51140 e2a568c86a5836cb12872c9f77ba823c 416 Gene3D G3DSA:3.40.190.10 1 411 5.2E-51 T 14-10-2018 AMIS_51140 e2a568c86a5836cb12872c9f77ba823c 416 SUPERFAMILY SSF53850 3 411 4.53E-43 T 14-10-2018 AMIS_51140 e2a568c86a5836cb12872c9f77ba823c 416 Pfam PF13416 Bacterial extracellular solute-binding protein 6 322 3.5E-20 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein AMIS_58500 771fcb1c9e496afa7147ff98bf09ff17 509 SUPERFAMILY SSF103190 37 164 1.06E-26 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily AMIS_58500 771fcb1c9e496afa7147ff98bf09ff17 509 SMART SM00387 399 509 1.6E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_58500 771fcb1c9e496afa7147ff98bf09ff17 509 SUPERFAMILY SSF55874 376 507 9.69E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_58500 771fcb1c9e496afa7147ff98bf09ff17 509 PRINTS PR00344 Bacterial sensor protein C-terminal signature 469 487 2.5E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_58500 771fcb1c9e496afa7147ff98bf09ff17 509 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 453 2.5E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_58500 771fcb1c9e496afa7147ff98bf09ff17 509 PRINTS PR00344 Bacterial sensor protein C-terminal signature 493 506 2.5E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_58500 771fcb1c9e496afa7147ff98bf09ff17 509 Gene3D G3DSA:3.30.450.20 33 169 1.4E-36 T 14-10-2018 AMIS_58500 771fcb1c9e496afa7147ff98bf09ff17 509 Gene3D G3DSA:3.30.450.20 199 296 2.5E-12 T 14-10-2018 AMIS_58500 771fcb1c9e496afa7147ff98bf09ff17 509 Pfam PF17203 Single cache domain 3 35 166 5.7E-19 T 14-10-2018 IPR033463 Single cache domain 3 AMIS_58500 771fcb1c9e496afa7147ff98bf09ff17 509 Pfam PF13188 PAS domain 212 251 2.1E-4 T 14-10-2018 IPR000014 PAS domain AMIS_58500 771fcb1c9e496afa7147ff98bf09ff17 509 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 402 507 1.3E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_58500 771fcb1c9e496afa7147ff98bf09ff17 509 Gene3D G3DSA:3.30.565.10 365 507 1.9E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_58970 06793ad2edba7191658e5d267b81ae42 247 SUPERFAMILY SSF102114 26 215 4.71E-30 T 14-10-2018 AMIS_58970 06793ad2edba7191658e5d267b81ae42 247 Gene3D G3DSA:3.20.20.70 5 247 1.0E-80 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_58970 06793ad2edba7191658e5d267b81ae42 247 Pfam PF04055 Radical SAM superfamily 29 179 8.8E-27 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMIS_58970 06793ad2edba7191658e5d267b81ae42 247 Pfam PF13353 4Fe-4S single cluster domain 19 126 3.5E-17 T 14-10-2018 AMIS_58970 06793ad2edba7191658e5d267b81ae42 247 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 10 242 1.4E-91 T 14-10-2018 IPR012838 Pyruvate formate-lyase 1 activating enzyme GO:0043365|GO:0055114 AMIS_1310 41cde967560e44c26a28a36f8028327d 188 Gene3D G3DSA:1.10.10.970 7 78 3.8E-12 T 14-10-2018 AMIS_1310 41cde967560e44c26a28a36f8028327d 188 Pfam PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family 8 173 6.1E-37 T 14-10-2018 IPR002745 Phosphotransferase KptA/Tpt1 GO:0006388|GO:0016772 AMIS_1310 41cde967560e44c26a28a36f8028327d 188 Hamap MF_00299 Probable RNA 2'-phosphotransferase [kptA]. 7 181 28.981 T 14-10-2018 IPR022928 RNA 2'-phosphotransferase KptA, putative GO:0016773 AMIS_1310 41cde967560e44c26a28a36f8028327d 188 Gene3D G3DSA:3.20.170.30 101 187 5.2E-27 T 14-10-2018 AMIS_1310 41cde967560e44c26a28a36f8028327d 188 SUPERFAMILY SSF56399 9 184 3.96E-51 T 14-10-2018 AMIS_33180 3b9379ef1e852eb013529bf42217eb1a 777 SMART SM00091 246 312 3.6E-13 T 14-10-2018 IPR000014 PAS domain AMIS_33180 3b9379ef1e852eb013529bf42217eb1a 777 SMART SM00091 6 72 1.2E-10 T 14-10-2018 IPR000014 PAS domain AMIS_33180 3b9379ef1e852eb013529bf42217eb1a 777 SMART SM00091 125 191 2.3E-16 T 14-10-2018 IPR000014 PAS domain AMIS_33180 3b9379ef1e852eb013529bf42217eb1a 777 Gene3D G3DSA:3.40.50.2300 661 777 3.4E-22 T 14-10-2018 AMIS_33180 3b9379ef1e852eb013529bf42217eb1a 777 SUPERFAMILY SSF47384 359 441 3.73E-9 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_33180 3b9379ef1e852eb013529bf42217eb1a 777 Gene3D G3DSA:3.30.450.20 240 353 3.3E-23 T 14-10-2018 AMIS_33180 3b9379ef1e852eb013529bf42217eb1a 777 Gene3D G3DSA:3.30.565.10 448 612 2.4E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_33180 3b9379ef1e852eb013529bf42217eb1a 777 PRINTS PR00344 Bacterial sensor protein C-terminal signature 554 564 1.5E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_33180 3b9379ef1e852eb013529bf42217eb1a 777 PRINTS PR00344 Bacterial sensor protein C-terminal signature 536 550 1.5E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_33180 3b9379ef1e852eb013529bf42217eb1a 777 PRINTS PR00344 Bacterial sensor protein C-terminal signature 591 604 1.5E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_33180 3b9379ef1e852eb013529bf42217eb1a 777 PRINTS PR00344 Bacterial sensor protein C-terminal signature 567 585 1.5E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_33180 3b9379ef1e852eb013529bf42217eb1a 777 Pfam PF00072 Response regulator receiver domain 666 774 1.3E-16 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_33180 3b9379ef1e852eb013529bf42217eb1a 777 SUPERFAMILY SSF55785 17 127 8.2E-23 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_33180 3b9379ef1e852eb013529bf42217eb1a 777 SUPERFAMILY SSF55785 239 353 2.62E-21 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_33180 3b9379ef1e852eb013529bf42217eb1a 777 SUPERFAMILY SSF55874 432 605 2.88E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_33180 3b9379ef1e852eb013529bf42217eb1a 777 SMART SM00448 664 776 1.9E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_33180 3b9379ef1e852eb013529bf42217eb1a 777 SUPERFAMILY SSF52172 663 776 2.42E-23 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_33180 3b9379ef1e852eb013529bf42217eb1a 777 SMART SM00387 483 607 1.0E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_33180 3b9379ef1e852eb013529bf42217eb1a 777 Gene3D G3DSA:1.10.287.130 361 440 4.4E-20 T 14-10-2018 AMIS_33180 3b9379ef1e852eb013529bf42217eb1a 777 SMART SM00086 201 241 130.0 T 14-10-2018 IPR001610 PAC motif AMIS_33180 3b9379ef1e852eb013529bf42217eb1a 777 SMART SM00086 78 120 0.073 T 14-10-2018 IPR001610 PAC motif AMIS_33180 3b9379ef1e852eb013529bf42217eb1a 777 SMART SM00086 319 355 260.0 T 14-10-2018 IPR001610 PAC motif AMIS_33180 3b9379ef1e852eb013529bf42217eb1a 777 SMART SM00388 368 442 1.1E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_33180 3b9379ef1e852eb013529bf42217eb1a 777 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 244 361 4.1E-20 T 14-10-2018 IPR000014 PAS domain AMIS_33180 3b9379ef1e852eb013529bf42217eb1a 777 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 5 126 1.7E-23 T 14-10-2018 IPR000014 PAS domain AMIS_33180 3b9379ef1e852eb013529bf42217eb1a 777 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 123 248 4.8E-22 T 14-10-2018 IPR000014 PAS domain AMIS_33180 3b9379ef1e852eb013529bf42217eb1a 777 SUPERFAMILY SSF55785 136 249 1.31E-24 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_33180 3b9379ef1e852eb013529bf42217eb1a 777 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 484 604 2.4E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_33180 3b9379ef1e852eb013529bf42217eb1a 777 Pfam PF00512 His Kinase A (phospho-acceptor) domain 368 440 2.0E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_33180 3b9379ef1e852eb013529bf42217eb1a 777 Gene3D G3DSA:3.30.450.20 126 239 5.5E-23 T 14-10-2018 AMIS_33180 3b9379ef1e852eb013529bf42217eb1a 777 Gene3D G3DSA:3.30.450.20 1 125 4.5E-26 T 14-10-2018 AMIS_33180 3b9379ef1e852eb013529bf42217eb1a 777 Pfam PF00989 PAS fold 8 115 2.1E-13 T 14-10-2018 IPR013767 PAS fold GO:0006355 AMIS_33180 3b9379ef1e852eb013529bf42217eb1a 777 Pfam PF00989 PAS fold 126 220 5.0E-16 T 14-10-2018 IPR013767 PAS fold GO:0006355 AMIS_33180 3b9379ef1e852eb013529bf42217eb1a 777 Pfam PF00989 PAS fold 246 322 2.4E-12 T 14-10-2018 IPR013767 PAS fold GO:0006355 AMIS_36070 ad1a0350bbb3c98a9d2537420d89ee7c 746 SUPERFAMILY SSF52172 490 611 2.13E-33 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_36070 ad1a0350bbb3c98a9d2537420d89ee7c 746 SMART SM00387 347 467 9.8E-36 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_36070 ad1a0350bbb3c98a9d2537420d89ee7c 746 Gene3D G3DSA:1.20.120.160 641 739 4.0E-16 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMIS_36070 ad1a0350bbb3c98a9d2537420d89ee7c 746 PRINTS PR00344 Bacterial sensor protein C-terminal signature 451 464 4.4E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_36070 ad1a0350bbb3c98a9d2537420d89ee7c 746 PRINTS PR00344 Bacterial sensor protein C-terminal signature 427 445 4.4E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_36070 ad1a0350bbb3c98a9d2537420d89ee7c 746 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 420 4.4E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_36070 ad1a0350bbb3c98a9d2537420d89ee7c 746 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 406 4.4E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_36070 ad1a0350bbb3c98a9d2537420d89ee7c 746 Gene3D G3DSA:1.10.287.130 240 300 5.3E-17 T 14-10-2018 AMIS_36070 ad1a0350bbb3c98a9d2537420d89ee7c 746 SMART SM00073 644 740 1.1E-7 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AMIS_36070 ad1a0350bbb3c98a9d2537420d89ee7c 746 SUPERFAMILY SSF55874 289 464 3.01E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_36070 ad1a0350bbb3c98a9d2537420d89ee7c 746 SMART SM00304 175 227 5.1E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_36070 ad1a0350bbb3c98a9d2537420d89ee7c 746 SUPERFAMILY SSF47226 588 717 7.07E-18 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMIS_36070 ad1a0350bbb3c98a9d2537420d89ee7c 746 SUPERFAMILY SSF47384 222 301 3.73E-20 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_36070 ad1a0350bbb3c98a9d2537420d89ee7c 746 SMART SM00448 491 605 1.1E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_36070 ad1a0350bbb3c98a9d2537420d89ee7c 746 SUPERFAMILY SSF158472 177 220 6.54E-6 T 14-10-2018 AMIS_36070 ad1a0350bbb3c98a9d2537420d89ee7c 746 Pfam PF00672 HAMP domain 177 217 5.2E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_36070 ad1a0350bbb3c98a9d2537420d89ee7c 746 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 347 466 5.0E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_36070 ad1a0350bbb3c98a9d2537420d89ee7c 746 Gene3D G3DSA:3.40.50.2300 477 613 9.0E-37 T 14-10-2018 AMIS_36070 ad1a0350bbb3c98a9d2537420d89ee7c 746 Gene3D G3DSA:1.20.1480.50 137 232 9.9E-8 T 14-10-2018 AMIS_36070 ad1a0350bbb3c98a9d2537420d89ee7c 746 Pfam PF00512 His Kinase A (phospho-acceptor) domain 235 300 1.1E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_36070 ad1a0350bbb3c98a9d2537420d89ee7c 746 Gene3D G3DSA:3.30.565.10 301 470 1.2E-50 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_36070 ad1a0350bbb3c98a9d2537420d89ee7c 746 SMART SM00388 235 300 8.5E-24 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_36070 ad1a0350bbb3c98a9d2537420d89ee7c 746 Pfam PF01627 Hpt domain 653 731 2.7E-12 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AMIS_36070 ad1a0350bbb3c98a9d2537420d89ee7c 746 Pfam PF00072 Response regulator receiver domain 493 604 6.1E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_54850 8b709852c31aca20657dd3a1d2834e96 458 SUPERFAMILY SSF53383 101 422 3.21E-61 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_54850 8b709852c31aca20657dd3a1d2834e96 458 SUPERFAMILY SSF46785 16 79 5.83E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_54850 8b709852c31aca20657dd3a1d2834e96 458 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 76 2.4E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_54850 8b709852c31aca20657dd3a1d2834e96 458 Gene3D G3DSA:3.40.640.10 130 341 1.8E-55 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_54850 8b709852c31aca20657dd3a1d2834e96 458 Gene3D G3DSA:1.10.10.10 15 87 6.0E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_54850 8b709852c31aca20657dd3a1d2834e96 458 Pfam PF00155 Aminotransferase class I and II 102 423 6.9E-21 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMIS_54850 8b709852c31aca20657dd3a1d2834e96 458 SMART SM00345 17 76 3.3E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_54850 8b709852c31aca20657dd3a1d2834e96 458 Gene3D G3DSA:3.90.1150.10 101 422 1.8E-55 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMIS_7210 32aae3e95452c933fc73ae9fce6cbea7 521 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 12 521 40.877 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AMIS_7210 32aae3e95452c933fc73ae9fce6cbea7 521 Pfam PF01808 AICARFT/IMPCHase bienzyme 143 454 1.5E-110 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AMIS_7210 32aae3e95452c933fc73ae9fce6cbea7 521 PIRSF PIRSF000414 7 521 3.2E-191 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AMIS_7210 32aae3e95452c933fc73ae9fce6cbea7 521 Gene3D G3DSA:3.40.50.1380 3 204 5.4E-80 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily AMIS_7210 32aae3e95452c933fc73ae9fce6cbea7 521 Gene3D G3DSA:3.40.140.20 391 521 2.4E-50 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AMIS_7210 32aae3e95452c933fc73ae9fce6cbea7 521 SMART SM00851 24 138 1.4E-45 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain AMIS_7210 32aae3e95452c933fc73ae9fce6cbea7 521 Pfam PF02142 MGS-like domain 24 137 1.6E-22 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain AMIS_7210 32aae3e95452c933fc73ae9fce6cbea7 521 SMART SM00798 143 455 3.5E-178 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AMIS_7210 32aae3e95452c933fc73ae9fce6cbea7 521 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 13 521 4.4E-165 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AMIS_7210 32aae3e95452c933fc73ae9fce6cbea7 521 SUPERFAMILY SSF53927 218 521 5.42E-117 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AMIS_7210 32aae3e95452c933fc73ae9fce6cbea7 521 Gene3D G3DSA:3.40.140.20 213 364 2.5E-59 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AMIS_7210 32aae3e95452c933fc73ae9fce6cbea7 521 SUPERFAMILY SSF52335 11 199 8.47E-58 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily AMIS_49450 7bd147e6d2256df1bcf2602917f9b771 255 SUPERFAMILY SSF56176 19 164 3.08E-28 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AMIS_49450 7bd147e6d2256df1bcf2602917f9b771 255 Gene3D G3DSA:3.30.465.10 52 164 1.4E-24 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AMIS_49450 7bd147e6d2256df1bcf2602917f9b771 255 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 25 164 2.1E-19 T 14-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 AMIS_37090 3e35b8918731cb21adf729e67409cdaa 254 Pfam PF05013 N-formylglutamate amidohydrolase 12 228 1.9E-42 T 14-10-2018 IPR007709 N-formylglutamate amidohydrolase AMIS_37090 3e35b8918731cb21adf729e67409cdaa 254 Gene3D G3DSA:3.40.630.40 3 254 5.5E-43 T 14-10-2018 AMIS_37090 3e35b8918731cb21adf729e67409cdaa 254 SUPERFAMILY SSF53187 3 253 5.34E-48 T 14-10-2018 AMIS_74650 c29fc4f709d674b1342146611bb54cf2 228 Pfam PF05719 Golgi phosphoprotein 3 (GPP34) 6 188 9.2E-43 T 14-10-2018 IPR008628 Golgi phosphoprotein 3-like GO:0070273 AMIS_74650 c29fc4f709d674b1342146611bb54cf2 228 Gene3D G3DSA:1.10.3630.10 1 207 3.0E-29 T 14-10-2018 IPR038261 Golgi phosphoprotein 3-like domain superfamily AMIS_57640 9a9d3d7f793742c892abd00aab5d3b52 655 SUPERFAMILY SSF51445 18 377 8.78E-111 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_57640 9a9d3d7f793742c892abd00aab5d3b52 655 Gene3D G3DSA:3.40.50.880 405 612 3.5E-62 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_57640 9a9d3d7f793742c892abd00aab5d3b52 655 Pfam PF02449 Beta-galactosidase 25 395 5.3E-152 T 14-10-2018 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AMIS_57640 9a9d3d7f793742c892abd00aab5d3b52 655 SUPERFAMILY SSF52317 404 607 1.79E-54 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_57640 9a9d3d7f793742c892abd00aab5d3b52 655 Pfam PF08532 Beta-galactosidase trimerisation domain 407 607 2.8E-59 T 14-10-2018 IPR013738 Beta-galactosidase trimerisation GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AMIS_57640 9a9d3d7f793742c892abd00aab5d3b52 655 PIRSF PIRSF001084 13 650 8.2E-254 T 14-10-2018 IPR003476 Glycoside hydrolase, family 42 GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AMIS_57640 9a9d3d7f793742c892abd00aab5d3b52 655 Gene3D G3DSA:3.20.20.80 8 399 1.6E-139 T 14-10-2018 AMIS_34580 a22cce9c4b9360b67f8ab0fa6c8f9436 322 Pfam PF13404 AsnC-type helix-turn-helix domain 182 218 7.6E-10 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMIS_34580 a22cce9c4b9360b67f8ab0fa6c8f9436 322 Pfam PF13404 AsnC-type helix-turn-helix domain 3 44 1.5E-12 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMIS_34580 a22cce9c4b9360b67f8ab0fa6c8f9436 322 SUPERFAMILY SSF46785 3 46 4.95E-5 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_34580 a22cce9c4b9360b67f8ab0fa6c8f9436 322 SUPERFAMILY SSF54909 240 316 1.61E-12 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel AMIS_34580 a22cce9c4b9360b67f8ab0fa6c8f9436 322 Gene3D G3DSA:3.30.70.920 230 321 4.1E-15 T 14-10-2018 AMIS_34580 a22cce9c4b9360b67f8ab0fa6c8f9436 322 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 194 205 1.6E-5 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMIS_34580 a22cce9c4b9360b67f8ab0fa6c8f9436 322 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 205 224 1.6E-5 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMIS_34580 a22cce9c4b9360b67f8ab0fa6c8f9436 322 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 178 194 1.6E-5 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMIS_34580 a22cce9c4b9360b67f8ab0fa6c8f9436 322 SUPERFAMILY SSF46785 173 227 3.4E-8 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_34580 a22cce9c4b9360b67f8ab0fa6c8f9436 322 Gene3D G3DSA:1.10.10.10 1 50 4.3E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_34580 a22cce9c4b9360b67f8ab0fa6c8f9436 322 Pfam PF01037 Lrp/AsnC ligand binding domain 245 313 3.5E-12 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMIS_34580 a22cce9c4b9360b67f8ab0fa6c8f9436 322 SMART SM00344 178 283 3.1E-5 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AMIS_34580 a22cce9c4b9360b67f8ab0fa6c8f9436 322 SMART SM00344 3 107 3.0E-4 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AMIS_34580 a22cce9c4b9360b67f8ab0fa6c8f9436 322 Gene3D G3DSA:1.10.10.10 176 225 1.3E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_65710 fe62c973c364940c37026df48126ccb5 294 Gene3D G3DSA:3.40.50.720 119 243 2.7E-56 T 14-10-2018 AMIS_65710 fe62c973c364940c37026df48126ccb5 294 Gene3D G3DSA:3.90.180.10 8 288 2.7E-56 T 14-10-2018 AMIS_65710 fe62c973c364940c37026df48126ccb5 294 SUPERFAMILY SSF50129 1 130 6.09E-30 T 14-10-2018 IPR011032 GroES-like superfamily AMIS_65710 fe62c973c364940c37026df48126ccb5 294 Pfam PF13602 Zinc-binding dehydrogenase 247 289 5.5E-6 T 14-10-2018 AMIS_65710 fe62c973c364940c37026df48126ccb5 294 SUPERFAMILY SSF51735 108 216 1.31E-17 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_65710 fe62c973c364940c37026df48126ccb5 294 SMART SM00829 10 289 8.9E-12 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMIS_54060 a714284946da936362174b0a5b929927 915 Gene3D G3DSA:3.40.50.300 139 314 1.4E-11 T 14-10-2018 AMIS_54060 a714284946da936362174b0a5b929927 915 Pfam PF01580 FtsK/SpoIIIE family 389 599 5.0E-20 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 AMIS_54060 a714284946da936362174b0a5b929927 915 Gene3D G3DSA:3.40.50.300 377 660 8.6E-54 T 14-10-2018 AMIS_54060 a714284946da936362174b0a5b929927 915 SUPERFAMILY SSF52540 386 602 1.59E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_64430 981b45c928274b12a379a1a20c2e125e 331 SUPERFAMILY SSF161098 92 282 1.57E-16 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_64430 981b45c928274b12a379a1a20c2e125e 331 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 29 68 2.9E-9 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AMIS_64430 981b45c928274b12a379a1a20c2e125e 331 Gene3D G3DSA:1.10.3720.10 84 301 9.6E-14 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_64430 981b45c928274b12a379a1a20c2e125e 331 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 300 2.7E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_90 6e66179b4410e43a6091c3c8e3c7d0ef 837 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 575 609 5.3E-9 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AMIS_90 6e66179b4410e43a6091c3c8e3c7d0ef 837 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 525 572 5.4E-12 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AMIS_90 6e66179b4410e43a6091c3c8e3c7d0ef 837 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 679 727 5.1E-12 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AMIS_90 6e66179b4410e43a6091c3c8e3c7d0ef 837 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 782 827 5.9E-9 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AMIS_90 6e66179b4410e43a6091c3c8e3c7d0ef 837 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 632 674 7.9E-11 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AMIS_90 6e66179b4410e43a6091c3c8e3c7d0ef 837 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 732 779 2.1E-13 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AMIS_90 6e66179b4410e43a6091c3c8e3c7d0ef 837 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 25 829 0.0 T 14-10-2018 AMIS_90 6e66179b4410e43a6091c3c8e3c7d0ef 837 Gene3D G3DSA:2.120.10.90 522 831 9.7E-124 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AMIS_90 6e66179b4410e43a6091c3c8e3c7d0ef 837 SMART SM00434 28 486 4.2E-277 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AMIS_90 6e66179b4410e43a6091c3c8e3c7d0ef 837 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 49 491 7.5E-151 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AMIS_90 6e66179b4410e43a6091c3c8e3c7d0ef 837 Gene3D G3DSA:3.30.1360.40 257 354 1.2E-199 T 14-10-2018 AMIS_90 6e66179b4410e43a6091c3c8e3c7d0ef 837 Gene3D G3DSA:3.90.199.10 49 508 1.2E-199 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 AMIS_90 6e66179b4410e43a6091c3c8e3c7d0ef 837 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 22 831 23.469 T 14-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMIS_90 6e66179b4410e43a6091c3c8e3c7d0ef 837 SUPERFAMILY SSF56719 47 509 1.83E-171 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AMIS_90 6e66179b4410e43a6091c3c8e3c7d0ef 837 SUPERFAMILY SSF101904 520 835 3.53E-100 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AMIS_90 6e66179b4410e43a6091c3c8e3c7d0ef 837 Gene3D G3DSA:1.10.268.10 391 479 1.2E-199 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AMIS_6280 f3e2519710183ee75a763d909f098dc2 38 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 38 18.253 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_6280 f3e2519710183ee75a763d909f098dc2 38 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 2 38 6.1E-19 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_6280 f3e2519710183ee75a763d909f098dc2 38 Pfam PF00444 Ribosomal protein L36 2 38 1.3E-18 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_6280 f3e2519710183ee75a763d909f098dc2 38 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 37 - T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_6280 f3e2519710183ee75a763d909f098dc2 38 SUPERFAMILY SSF57840 2 38 6.28E-17 T 14-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_6280 f3e2519710183ee75a763d909f098dc2 38 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 38 2.0E-7 T 14-10-2018 AMIS_42810 7d7a9a64a79834ad261ce1b07df1ed0a 1049 Gene3D G3DSA:3.30.379.10 133 257 1.6E-39 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 AMIS_42810 7d7a9a64a79834ad261ce1b07df1ed0a 1049 Gene3D G3DSA:3.20.20.520 258 572 7.2E-107 T 14-10-2018 AMIS_42810 7d7a9a64a79834ad261ce1b07df1ed0a 1049 Gene3D G3DSA:2.60.120.1620 877 1049 7.8E-43 T 14-10-2018 AMIS_42810 7d7a9a64a79834ad261ce1b07df1ed0a 1049 Gene3D G3DSA:1.20.58.2150 574 766 3.9E-46 T 14-10-2018 AMIS_42810 7d7a9a64a79834ad261ce1b07df1ed0a 1049 Pfam PF15979 Glycosyl hydrolase family 115 253 615 6.5E-125 T 14-10-2018 IPR031924 Glycosyl hydrolase family 115 AMIS_2890 12badf935bfb3acb4cf559f6f55f6b28 831 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 157 167 - T 14-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_2890 12badf935bfb3acb4cf559f6f55f6b28 831 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 10 84 8.0E-19 T 14-10-2018 AMIS_2890 12badf935bfb3acb4cf559f6f55f6b28 831 Gene3D G3DSA:3.40.228.10 386 473 7.9E-15 T 14-10-2018 AMIS_2890 12badf935bfb3acb4cf559f6f55f6b28 831 Gene3D G3DSA:2.20.25.90 248 299 2.1E-9 T 14-10-2018 AMIS_2890 12badf935bfb3acb4cf559f6f55f6b28 831 SUPERFAMILY SSF53706 237 697 1.33E-78 T 14-10-2018 AMIS_2890 12badf935bfb3acb4cf559f6f55f6b28 831 Gene3D G3DSA:3.30.70.20 137 235 5.6E-5 T 14-10-2018 AMIS_2890 12badf935bfb3acb4cf559f6f55f6b28 831 Pfam PF01568 Molydopterin dinucleotide binding domain 739 803 2.3E-10 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 AMIS_2890 12badf935bfb3acb4cf559f6f55f6b28 831 SMART SM00926 246 300 5.8E-6 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_2890 12badf935bfb3acb4cf559f6f55f6b28 831 SUPERFAMILY SSF50692 715 798 1.91E-14 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily AMIS_2890 12badf935bfb3acb4cf559f6f55f6b28 831 Gene3D G3DSA:3.10.20.740 10 134 1.0E-35 T 14-10-2018 AMIS_2890 12badf935bfb3acb4cf559f6f55f6b28 831 SMART SM00929 94 134 7.1E-19 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_2890 12badf935bfb3acb4cf559f6f55f6b28 831 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 109 121 - T 14-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_2890 12badf935bfb3acb4cf559f6f55f6b28 831 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 96 133 9.6E-16 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_2890 12badf935bfb3acb4cf559f6f55f6b28 831 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 13 669 3.7E-153 T 14-10-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_2890 12badf935bfb3acb4cf559f6f55f6b28 831 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 40 57 - T 14-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_2890 12badf935bfb3acb4cf559f6f55f6b28 831 SUPERFAMILY SSF54862 87 242 7.11E-28 T 14-10-2018 AMIS_2890 12badf935bfb3acb4cf559f6f55f6b28 831 Pfam PF00384 Molybdopterin oxidoreductase 556 659 1.9E-8 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_2890 12badf935bfb3acb4cf559f6f55f6b28 831 Pfam PF00384 Molybdopterin oxidoreductase 303 452 1.3E-12 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_2890 12badf935bfb3acb4cf559f6f55f6b28 831 SUPERFAMILY SSF54292 11 83 7.56E-19 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AMIS_2890 12badf935bfb3acb4cf559f6f55f6b28 831 Gene3D G3DSA:3.40.50.740 496 707 3.7E-27 T 14-10-2018 AMIS_2890 12badf935bfb3acb4cf559f6f55f6b28 831 Gene3D G3DSA:3.40.50.740 308 385 7.9E-15 T 14-10-2018 AMIS_2890 12badf935bfb3acb4cf559f6f55f6b28 831 Gene3D G3DSA:2.40.40.20 708 818 1.5E-8 T 14-10-2018 AMIS_75070 ede2af55e41037104bfa6ccb2e694e3b 598 ProSitePatterns PS00211 ABC transporters family signature. 413 427 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_75070 ede2af55e41037104bfa6ccb2e694e3b 598 Pfam PF00005 ABC transporter 308 441 1.3E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_75070 ede2af55e41037104bfa6ccb2e694e3b 598 Pfam PF00005 ABC transporter 21 160 4.0E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_75070 ede2af55e41037104bfa6ccb2e694e3b 598 SMART SM00382 30 212 6.1E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_75070 ede2af55e41037104bfa6ccb2e694e3b 598 SMART SM00382 316 494 3.6E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_75070 ede2af55e41037104bfa6ccb2e694e3b 598 SUPERFAMILY SSF52540 280 491 7.55E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_75070 ede2af55e41037104bfa6ccb2e694e3b 598 Gene3D G3DSA:3.40.50.300 273 505 1.1E-55 T 14-10-2018 AMIS_75070 ede2af55e41037104bfa6ccb2e694e3b 598 Gene3D G3DSA:3.40.50.300 2 240 6.4E-55 T 14-10-2018 AMIS_75070 ede2af55e41037104bfa6ccb2e694e3b 598 SUPERFAMILY SSF52540 4 209 1.58E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_75070 ede2af55e41037104bfa6ccb2e694e3b 598 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_79500 5447a8c004bbde8f3a12dcb677a59b69 404 Pfam PF12704 MacB-like periplasmic core domain 24 230 2.6E-16 T 14-10-2018 IPR025857 MacB-like periplasmic core domain AMIS_79500 5447a8c004bbde8f3a12dcb677a59b69 404 Pfam PF02687 FtsX-like permease family 309 396 1.2E-10 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AMIS_32860 b793aa2252619680d77d1978aea4bd77 522 Pfam PF00171 Aldehyde dehydrogenase family 23 486 1.5E-132 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AMIS_32860 b793aa2252619680d77d1978aea4bd77 522 Gene3D G3DSA:3.40.309.10 265 458 1.1E-143 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AMIS_32860 b793aa2252619680d77d1978aea4bd77 522 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 258 265 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AMIS_32860 b793aa2252619680d77d1978aea4bd77 522 Gene3D G3DSA:3.40.605.10 30 481 1.1E-143 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AMIS_32860 b793aa2252619680d77d1978aea4bd77 522 SUPERFAMILY SSF53720 22 490 3.67E-138 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMIS_5040 e0111e2a566169b3d1a7045e3b2bdc25 697 SMART SM00387 569 681 4.1E-34 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_5040 e0111e2a566169b3d1a7045e3b2bdc25 697 Gene3D G3DSA:3.30.565.10 530 685 1.9E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_5040 e0111e2a566169b3d1a7045e3b2bdc25 697 SUPERFAMILY SSF55874 521 679 1.01E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_5040 e0111e2a566169b3d1a7045e3b2bdc25 697 Gene3D G3DSA:3.30.450.20 316 456 1.4E-11 T 14-10-2018 AMIS_5040 e0111e2a566169b3d1a7045e3b2bdc25 697 Pfam PF08448 PAS fold 337 449 1.5E-5 T 14-10-2018 IPR013656 PAS fold-4 AMIS_5040 e0111e2a566169b3d1a7045e3b2bdc25 697 SMART SM00388 453 525 3.3E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_5040 e0111e2a566169b3d1a7045e3b2bdc25 697 Gene3D G3DSA:1.10.287.130 460 525 6.1E-5 T 14-10-2018 AMIS_5040 e0111e2a566169b3d1a7045e3b2bdc25 697 Pfam PF05231 MASE1 11 306 1.7E-12 T 14-10-2018 IPR007895 MASE1 AMIS_5040 e0111e2a566169b3d1a7045e3b2bdc25 697 SUPERFAMILY SSF55785 319 445 1.05E-8 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_5040 e0111e2a566169b3d1a7045e3b2bdc25 697 SUPERFAMILY SSF47384 438 520 1.16E-8 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_5040 e0111e2a566169b3d1a7045e3b2bdc25 697 PRINTS PR00344 Bacterial sensor protein C-terminal signature 608 622 3.0E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_5040 e0111e2a566169b3d1a7045e3b2bdc25 697 PRINTS PR00344 Bacterial sensor protein C-terminal signature 665 678 3.0E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_5040 e0111e2a566169b3d1a7045e3b2bdc25 697 PRINTS PR00344 Bacterial sensor protein C-terminal signature 641 659 3.0E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_5040 e0111e2a566169b3d1a7045e3b2bdc25 697 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 570 679 2.6E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_5040 e0111e2a566169b3d1a7045e3b2bdc25 697 Pfam PF00512 His Kinase A (phospho-acceptor) domain 454 522 8.2E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_42450 bbbb98fffbc48ffd0ad39c746e6df500 453 Pfam PF01494 FAD binding domain 2 326 9.9E-80 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 AMIS_42450 bbbb98fffbc48ffd0ad39c746e6df500 453 Gene3D G3DSA:3.50.50.60 2 326 7.4E-107 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_42450 bbbb98fffbc48ffd0ad39c746e6df500 453 Gene3D G3DSA:3.40.30.120 376 451 1.1E-10 T 14-10-2018 AMIS_42450 bbbb98fffbc48ffd0ad39c746e6df500 453 Gene3D G3DSA:3.30.70.2450 168 251 7.4E-107 T 14-10-2018 AMIS_42450 bbbb98fffbc48ffd0ad39c746e6df500 453 SUPERFAMILY SSF51905 2 360 2.07E-63 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_42450 bbbb98fffbc48ffd0ad39c746e6df500 453 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 277 293 6.2E-46 T 14-10-2018 AMIS_42450 bbbb98fffbc48ffd0ad39c746e6df500 453 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 1 23 6.2E-46 T 14-10-2018 AMIS_42450 bbbb98fffbc48ffd0ad39c746e6df500 453 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 295 313 6.2E-46 T 14-10-2018 AMIS_42450 bbbb98fffbc48ffd0ad39c746e6df500 453 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 262 277 6.2E-46 T 14-10-2018 AMIS_42450 bbbb98fffbc48ffd0ad39c746e6df500 453 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 313 329 6.2E-46 T 14-10-2018 AMIS_42450 bbbb98fffbc48ffd0ad39c746e6df500 453 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 139 154 6.2E-46 T 14-10-2018 AMIS_59680 8764239b7f469d1979a638a93c6bcb89 413 Pfam PF13458 Periplasmic binding protein 41 372 3.1E-41 T 14-10-2018 IPR028081 Leucine-binding protein domain AMIS_59680 8764239b7f469d1979a638a93c6bcb89 413 Gene3D G3DSA:3.40.50.2300 42 364 4.2E-33 T 14-10-2018 AMIS_59680 8764239b7f469d1979a638a93c6bcb89 413 Gene3D G3DSA:3.40.50.2300 161 291 4.2E-33 T 14-10-2018 AMIS_59680 8764239b7f469d1979a638a93c6bcb89 413 SUPERFAMILY SSF53822 41 395 2.04E-36 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_67020 5e9806279fc26c715ef147190d7d494e 748 SUPERFAMILY SSF52980 329 437 2.17E-11 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AMIS_67020 5e9806279fc26c715ef147190d7d494e 748 Pfam PF13087 AAA domain 100 284 3.5E-10 T 14-10-2018 AMIS_67020 5e9806279fc26c715ef147190d7d494e 748 Gene3D G3DSA:3.40.50.300 2 83 1.1E-7 T 14-10-2018 AMIS_67020 5e9806279fc26c715ef147190d7d494e 748 Gene3D G3DSA:3.40.50.300 118 311 6.8E-23 T 14-10-2018 AMIS_67020 5e9806279fc26c715ef147190d7d494e 748 SUPERFAMILY SSF52540 23 284 1.06E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_67020 5e9806279fc26c715ef147190d7d494e 748 Gene3D G3DSA:3.40.960.10 335 433 9.0E-15 T 14-10-2018 AMIS_77650 c4218a12c253f7395ec642f6b0c19ba4 176 PIRSF PIRSF004749 2 174 9.1E-42 T 14-10-2018 IPR023635 Peptide deformylase AMIS_77650 c4218a12c253f7395ec642f6b0c19ba4 176 Hamap MF_00163 Peptide deformylase [def]. 11 173 21.183 T 14-10-2018 IPR023635 Peptide deformylase AMIS_77650 c4218a12c253f7395ec642f6b0c19ba4 176 SUPERFAMILY SSF56420 12 171 6.02E-40 T 14-10-2018 IPR036821 Peptide deformylase superfamily AMIS_77650 c4218a12c253f7395ec642f6b0c19ba4 176 Pfam PF01327 Polypeptide deformylase 13 164 1.5E-36 T 14-10-2018 IPR023635 Peptide deformylase AMIS_77650 c4218a12c253f7395ec642f6b0c19ba4 176 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 14 164 6.0E-31 T 14-10-2018 IPR023635 Peptide deformylase AMIS_77650 c4218a12c253f7395ec642f6b0c19ba4 176 PRINTS PR01576 Peptide deformylase signature 104 115 1.9E-18 T 14-10-2018 IPR023635 Peptide deformylase AMIS_77650 c4218a12c253f7395ec642f6b0c19ba4 176 PRINTS PR01576 Peptide deformylase signature 136 165 1.9E-18 T 14-10-2018 IPR023635 Peptide deformylase AMIS_77650 c4218a12c253f7395ec642f6b0c19ba4 176 PRINTS PR01576 Peptide deformylase signature 43 72 1.9E-18 T 14-10-2018 IPR023635 Peptide deformylase AMIS_77650 c4218a12c253f7395ec642f6b0c19ba4 176 Gene3D G3DSA:3.90.45.10 2 175 4.4E-42 T 14-10-2018 IPR036821 Peptide deformylase superfamily AMIS_45160 bdd4f65c960790ed0215abcbbefd3fe3 112 SUPERFAMILY SSF46785 5 102 6.82E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_45160 bdd4f65c960790ed0215abcbbefd3fe3 112 Pfam PF12840 Helix-turn-helix domain 8 66 2.0E-12 T 14-10-2018 AMIS_45160 bdd4f65c960790ed0215abcbbefd3fe3 112 SMART SM00418 9 87 2.7E-24 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_45160 bdd4f65c960790ed0215abcbbefd3fe3 112 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 11 26 2.4E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_45160 bdd4f65c960790ed0215abcbbefd3fe3 112 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 43 58 2.4E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_45160 bdd4f65c960790ed0215abcbbefd3fe3 112 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 58 73 2.4E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_45160 bdd4f65c960790ed0215abcbbefd3fe3 112 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 30 41 2.4E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_45160 bdd4f65c960790ed0215abcbbefd3fe3 112 Gene3D G3DSA:1.10.10.10 8 110 5.1E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_63380 95603a7a25a3a08bdd87b242a9d9c60d 130 Gene3D G3DSA:3.30.720.110 73 128 1.8E-20 T 14-10-2018 AMIS_63380 95603a7a25a3a08bdd87b242a9d9c60d 130 Gene3D G3DSA:3.30.720.120 5 65 2.8E-7 T 14-10-2018 AMIS_63380 95603a7a25a3a08bdd87b242a9d9c60d 130 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 11 121 2.7E-7 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMIS_63380 95603a7a25a3a08bdd87b242a9d9c60d 130 SUPERFAMILY SSF54593 4 123 5.5E-24 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_71300 5c227b16597eac12e0ae03ed6aa8f46f 842 Pfam PF00989 PAS fold 299 359 5.9E-9 T 14-10-2018 IPR013767 PAS fold GO:0006355 AMIS_71300 5c227b16597eac12e0ae03ed6aa8f46f 842 SMART SM00267 415 581 4.1E-35 T 14-10-2018 IPR000160 GGDEF domain AMIS_71300 5c227b16597eac12e0ae03ed6aa8f46f 842 SMART SM00052 591 831 1.4E-73 T 14-10-2018 IPR001633 EAL domain AMIS_71300 5c227b16597eac12e0ae03ed6aa8f46f 842 SUPERFAMILY SSF55785 284 411 1.08E-15 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_71300 5c227b16597eac12e0ae03ed6aa8f46f 842 SUPERFAMILY SSF55073 431 583 6.12E-30 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_71300 5c227b16597eac12e0ae03ed6aa8f46f 842 SMART SM00091 298 364 5.4E-10 T 14-10-2018 IPR000014 PAS domain AMIS_71300 5c227b16597eac12e0ae03ed6aa8f46f 842 Gene3D G3DSA:3.20.20.450 595 842 1.0E-76 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_71300 5c227b16597eac12e0ae03ed6aa8f46f 842 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 296 422 5.7E-13 T 14-10-2018 IPR000014 PAS domain AMIS_71300 5c227b16597eac12e0ae03ed6aa8f46f 842 SUPERFAMILY SSF141868 596 838 3.27E-67 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_71300 5c227b16597eac12e0ae03ed6aa8f46f 842 Gene3D G3DSA:3.30.450.20 286 420 1.1E-15 T 14-10-2018 AMIS_71300 5c227b16597eac12e0ae03ed6aa8f46f 842 Gene3D G3DSA:3.30.70.270 421 594 4.2E-37 T 14-10-2018 AMIS_71300 5c227b16597eac12e0ae03ed6aa8f46f 842 Pfam PF00563 EAL domain 599 826 4.0E-58 T 14-10-2018 IPR001633 EAL domain AMIS_71300 5c227b16597eac12e0ae03ed6aa8f46f 842 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 422 579 1.2E-19 T 14-10-2018 IPR000160 GGDEF domain AMIS_71300 5c227b16597eac12e0ae03ed6aa8f46f 842 Pfam PF00990 Diguanylate cyclase, GGDEF domain 427 574 4.6E-25 T 14-10-2018 IPR000160 GGDEF domain AMIS_56790 2d74b0f86b86880f757d6d3b4d7332e0 207 Pfam PF01726 LexA DNA binding domain 11 74 1.2E-22 T 14-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 AMIS_56790 2d74b0f86b86880f757d6d3b4d7332e0 207 Gene3D G3DSA:1.10.10.10 11 78 1.9E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_56790 2d74b0f86b86880f757d6d3b4d7332e0 207 Hamap MF_00015 LexA repressor [lexA]. 12 207 30.791 T 14-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 AMIS_56790 2d74b0f86b86880f757d6d3b4d7332e0 207 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 162 174 7.8E-10 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AMIS_56790 2d74b0f86b86880f757d6d3b4d7332e0 207 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 123 133 7.8E-10 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AMIS_56790 2d74b0f86b86880f757d6d3b4d7332e0 207 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 134 145 7.8E-10 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AMIS_56790 2d74b0f86b86880f757d6d3b4d7332e0 207 Pfam PF00717 Peptidase S24-like 127 185 5.2E-13 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AMIS_56790 2d74b0f86b86880f757d6d3b4d7332e0 207 SUPERFAMILY SSF51306 86 205 1.27E-32 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily AMIS_56790 2d74b0f86b86880f757d6d3b4d7332e0 207 Gene3D G3DSA:2.10.109.10 92 207 3.5E-38 T 14-10-2018 AMIS_56790 2d74b0f86b86880f757d6d3b4d7332e0 207 TIGRFAM TIGR00498 lexA: repressor LexA 11 206 2.0E-67 T 14-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 AMIS_56790 2d74b0f86b86880f757d6d3b4d7332e0 207 SUPERFAMILY SSF46785 12 78 2.61E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_70120 f75f553d7e6b59a9151062ce45cb69cf 453 Gene3D G3DSA:3.40.50.450 60 375 1.8E-86 T 14-10-2018 AMIS_70120 f75f553d7e6b59a9151062ce45cb69cf 453 SUPERFAMILY SSF102405 175 371 2.9E-31 T 14-10-2018 AMIS_70120 f75f553d7e6b59a9151062ce45cb69cf 453 Pfam PF02481 DNA recombination-mediator protein A 140 362 8.5E-63 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 AMIS_70120 f75f553d7e6b59a9151062ce45cb69cf 453 SUPERFAMILY SSF46785 392 445 8.37E-7 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_4150 4d3234ff4056f6a416bedda555edc2e4 335 SUPERFAMILY SSF51735 119 296 7.81E-27 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_4150 4d3234ff4056f6a416bedda555edc2e4 335 SMART SM00829 12 330 2.8E-10 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMIS_4150 4d3234ff4056f6a416bedda555edc2e4 335 Gene3D G3DSA:3.40.50.720 127 296 6.4E-69 T 14-10-2018 AMIS_4150 4d3234ff4056f6a416bedda555edc2e4 335 SUPERFAMILY SSF50129 1 142 3.5E-32 T 14-10-2018 IPR011032 GroES-like superfamily AMIS_4150 4d3234ff4056f6a416bedda555edc2e4 335 Gene3D G3DSA:3.90.180.10 13 328 6.4E-69 T 14-10-2018 AMIS_4150 4d3234ff4056f6a416bedda555edc2e4 335 Pfam PF00107 Zinc-binding dehydrogenase 166 273 2.6E-16 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMIS_4150 4d3234ff4056f6a416bedda555edc2e4 335 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 89 2.6E-5 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMIS_54010 81b1c50daf82e9b83f2c6f3dd3e94fcb 330 SUPERFAMILY SSF53850 104 301 1.26E-18 T 14-10-2018 AMIS_54010 81b1c50daf82e9b83f2c6f3dd3e94fcb 330 Gene3D G3DSA:1.10.10.10 2 90 7.3E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_54010 81b1c50daf82e9b83f2c6f3dd3e94fcb 330 Gene3D G3DSA:3.40.190.10 173 271 4.5E-24 T 14-10-2018 AMIS_54010 81b1c50daf82e9b83f2c6f3dd3e94fcb 330 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.0E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_54010 81b1c50daf82e9b83f2c6f3dd3e94fcb 330 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.0E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_54010 81b1c50daf82e9b83f2c6f3dd3e94fcb 330 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.0E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_54010 81b1c50daf82e9b83f2c6f3dd3e94fcb 330 SUPERFAMILY SSF46785 3 116 7.07E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_54010 81b1c50daf82e9b83f2c6f3dd3e94fcb 330 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 4.5E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_54010 81b1c50daf82e9b83f2c6f3dd3e94fcb 330 Gene3D G3DSA:3.40.190.10 104 284 4.5E-24 T 14-10-2018 AMIS_54010 81b1c50daf82e9b83f2c6f3dd3e94fcb 330 Pfam PF03466 LysR substrate binding domain 99 296 2.3E-19 T 14-10-2018 IPR005119 LysR, substrate-binding AMIS_12230 5f0766e59e533763f42a491f01fe7ca7 404 Pfam PF01966 HD domain 58 198 1.8E-18 T 14-10-2018 IPR006674 HD domain AMIS_12230 5f0766e59e533763f42a491f01fe7ca7 404 SMART SM00471 54 208 1.0E-10 T 14-10-2018 IPR003607 HD/PDEase domain AMIS_12230 5f0766e59e533763f42a491f01fe7ca7 404 SUPERFAMILY SSF109604 15 392 1.1E-61 T 14-10-2018 AMIS_12230 5f0766e59e533763f42a491f01fe7ca7 404 Gene3D G3DSA:1.10.3210.10 2 401 2.7E-93 T 14-10-2018 AMIS_12230 5f0766e59e533763f42a491f01fe7ca7 404 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 21 399 4.6E-80 T 14-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 AMIS_12230 5f0766e59e533763f42a491f01fe7ca7 404 Pfam PF13286 Phosphohydrolase-associated domain 308 397 9.4E-19 T 14-10-2018 IPR026875 Phosphohydrolase-associated domain AMIS_12230 5f0766e59e533763f42a491f01fe7ca7 404 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 1 400 30.194 T 14-10-2018 IPR023023 dNTP triphosphohydrolase, type 2 GO:0016793 AMIS_48680 a9a36d40e346faf96ec07a8633a471a0 888 Pfam PF13191 AAA ATPase domain 2 151 1.6E-17 T 14-10-2018 AMIS_48680 a9a36d40e346faf96ec07a8633a471a0 888 Pfam PF00196 Bacterial regulatory proteins, luxR family 824 877 1.1E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_48680 a9a36d40e346faf96ec07a8633a471a0 888 SMART SM00421 822 879 8.6E-22 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_48680 a9a36d40e346faf96ec07a8633a471a0 888 Gene3D G3DSA:1.25.40.10 647 799 7.4E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_48680 a9a36d40e346faf96ec07a8633a471a0 888 SUPERFAMILY SSF48452 610 798 2.73E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_48680 a9a36d40e346faf96ec07a8633a471a0 888 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 825 839 9.7E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_48680 a9a36d40e346faf96ec07a8633a471a0 888 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 839 855 9.7E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_48680 a9a36d40e346faf96ec07a8633a471a0 888 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 855 867 9.7E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_48680 a9a36d40e346faf96ec07a8633a471a0 888 SUPERFAMILY SSF52540 2 218 2.73E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_48680 a9a36d40e346faf96ec07a8633a471a0 888 SUPERFAMILY SSF46894 813 879 2.65E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_48680 a9a36d40e346faf96ec07a8633a471a0 888 Gene3D G3DSA:1.10.10.10 800 881 8.2E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_66650 77b8f19080a2ee66a00e182e7a4737b4 393 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 137 227 3.0E-24 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMIS_66650 77b8f19080a2ee66a00e182e7a4737b4 393 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 22 133 6.8E-31 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMIS_66650 77b8f19080a2ee66a00e182e7a4737b4 393 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 239 386 2.0E-29 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMIS_66650 77b8f19080a2ee66a00e182e7a4737b4 393 Gene3D G3DSA:1.20.140.10 241 393 2.8E-36 T 14-10-2018 AMIS_66650 77b8f19080a2ee66a00e182e7a4737b4 393 SUPERFAMILY SSF56645 12 238 1.96E-77 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMIS_66650 77b8f19080a2ee66a00e182e7a4737b4 393 Gene3D G3DSA:2.40.110.10 136 239 1.0E-36 T 14-10-2018 AMIS_66650 77b8f19080a2ee66a00e182e7a4737b4 393 Gene3D G3DSA:1.10.540.10 3 134 2.1E-41 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMIS_66650 77b8f19080a2ee66a00e182e7a4737b4 393 SUPERFAMILY SSF47203 245 389 7.89E-37 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMIS_37820 b7fd545b70b12fc734813476a3bb6157 293 Gene3D G3DSA:3.20.20.30 20 293 3.8E-63 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_37820 b7fd545b70b12fc734813476a3bb6157 293 TIGRFAM TIGR03560 F420_Rv1855c: probable F420-dependent oxidoreductase, Rv1855c family 17 239 1.5E-81 T 14-10-2018 IPR019952 F420-dependent oxidoreductase-predicted, Rv1855c AMIS_37820 b7fd545b70b12fc734813476a3bb6157 293 Pfam PF00296 Luciferase-like monooxygenase 3 261 5.6E-48 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMIS_37820 b7fd545b70b12fc734813476a3bb6157 293 SUPERFAMILY SSF51679 1 292 5.5E-64 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_18110 0378d2c61118d724be8c3e99b9267ea9 489 Pfam PF13520 Amino acid permease 28 454 4.4E-53 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AMIS_18110 0378d2c61118d724be8c3e99b9267ea9 489 Gene3D G3DSA:1.20.1740.10 30 461 1.3E-27 T 14-10-2018 AMIS_18110 0378d2c61118d724be8c3e99b9267ea9 489 PIRSF PIRSF006060 16 487 6.4E-47 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AMIS_45890 ffd31705e688c43bb72cb6d381462159 902 SUPERFAMILY SSF52540 15 192 2.02E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_45890 ffd31705e688c43bb72cb6d381462159 902 SUPERFAMILY SSF46894 811 877 2.01E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_45890 ffd31705e688c43bb72cb6d381462159 902 Gene3D G3DSA:3.40.50.300 3 166 1.4E-5 T 14-10-2018 AMIS_45890 ffd31705e688c43bb72cb6d381462159 902 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 853 865 1.7E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_45890 ffd31705e688c43bb72cb6d381462159 902 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 837 853 1.7E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_45890 ffd31705e688c43bb72cb6d381462159 902 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 823 837 1.7E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_45890 ffd31705e688c43bb72cb6d381462159 902 SMART SM00382 15 167 0.0076 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_45890 ffd31705e688c43bb72cb6d381462159 902 Pfam PF00196 Bacterial regulatory proteins, luxR family 822 876 2.1E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_45890 ffd31705e688c43bb72cb6d381462159 902 SMART SM00421 820 877 1.7E-21 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_45890 ffd31705e688c43bb72cb6d381462159 902 Gene3D G3DSA:1.10.10.10 798 879 2.1E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_75150 cf37e5271a280d20dcdf67ddd5686a83 600 Gene3D G3DSA:1.10.730.10 398 588 7.1E-35 T 14-10-2018 AMIS_75150 cf37e5271a280d20dcdf67ddd5686a83 600 Gene3D G3DSA:3.40.50.620 7 397 4.9E-145 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMIS_75150 cf37e5271a280d20dcdf67ddd5686a83 600 SUPERFAMILY SSF57770 139 173 4.05E-12 T 14-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AMIS_75150 cf37e5271a280d20dcdf67ddd5686a83 600 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 9 527 6.8E-149 T 14-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AMIS_75150 cf37e5271a280d20dcdf67ddd5686a83 600 SUPERFAMILY SSF47323 407 596 1.87E-33 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMIS_75150 cf37e5271a280d20dcdf67ddd5686a83 600 Hamap MF_00098 Methionine--tRNA ligase [metG]. 2 595 38.773 T 14-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AMIS_75150 cf37e5271a280d20dcdf67ddd5686a83 600 PRINTS PR01041 Methionyl-tRNA synthetase signature 6 19 1.7E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AMIS_75150 cf37e5271a280d20dcdf67ddd5686a83 600 PRINTS PR01041 Methionyl-tRNA synthetase signature 252 263 1.7E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AMIS_75150 cf37e5271a280d20dcdf67ddd5686a83 600 PRINTS PR01041 Methionyl-tRNA synthetase signature 39 53 1.7E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AMIS_75150 cf37e5271a280d20dcdf67ddd5686a83 600 PRINTS PR01041 Methionyl-tRNA synthetase signature 87 98 1.7E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AMIS_75150 cf37e5271a280d20dcdf67ddd5686a83 600 PRINTS PR01041 Methionyl-tRNA synthetase signature 296 311 1.7E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AMIS_75150 cf37e5271a280d20dcdf67ddd5686a83 600 PRINTS PR01041 Methionyl-tRNA synthetase signature 402 413 1.7E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AMIS_75150 cf37e5271a280d20dcdf67ddd5686a83 600 Gene3D G3DSA:2.20.28.20 139 173 4.9E-145 T 14-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AMIS_75150 cf37e5271a280d20dcdf67ddd5686a83 600 SUPERFAMILY SSF52374 4 401 2.96E-92 T 14-10-2018 AMIS_75150 cf37e5271a280d20dcdf67ddd5686a83 600 Pfam PF09334 tRNA synthetases class I (M) 5 414 1.1E-145 T 14-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMIS_71780 70ada6313e39afe4b134df3fcef226c2 219 Hamap MF_00722 Endonuclease NucS [nucS]. 1 211 30.953 T 14-10-2018 IPR002793 Endonuclease NucS GO:0004519 AMIS_71780 70ada6313e39afe4b134df3fcef226c2 219 Gene3D G3DSA:3.40.1350.10 94 205 1.1E-23 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 AMIS_71780 70ada6313e39afe4b134df3fcef226c2 219 Pfam PF01939 Endonuclease NucS 1 219 5.6E-81 T 14-10-2018 IPR002793 Endonuclease NucS GO:0004519 AMIS_71780 70ada6313e39afe4b134df3fcef226c2 219 Gene3D G3DSA:2.70.180.20 1 89 3.4E-20 T 14-10-2018 AMIS_77530 fc0f5bfe1bb71dae07573ba87b490d65 161 Gene3D G3DSA:1.20.58.1290 61 161 1.7E-36 T 14-10-2018 AMIS_77530 fc0f5bfe1bb71dae07573ba87b490d65 161 Pfam PF02559 CarD-like/TRCF domain 3 111 3.6E-17 T 14-10-2018 IPR003711 CarD-like/TRCF domain AMIS_77530 fc0f5bfe1bb71dae07573ba87b490d65 161 SMART SM01058 2 112 2.0E-33 T 14-10-2018 IPR003711 CarD-like/TRCF domain AMIS_77530 fc0f5bfe1bb71dae07573ba87b490d65 161 Gene3D G3DSA:2.30.30.840 1 60 9.5E-26 T 14-10-2018 AMIS_77530 fc0f5bfe1bb71dae07573ba87b490d65 161 SUPERFAMILY SSF141259 3 65 7.59E-14 T 14-10-2018 IPR036101 CarD-like/TRCF domain superfamily AMIS_24560 f1dee61c76d72f099fa40f7950639267 223 Pfam PF07729 FCD domain 90 212 1.3E-19 T 14-10-2018 IPR011711 GntR, C-terminal AMIS_24560 f1dee61c76d72f099fa40f7950639267 223 SMART SM00345 1 60 3.3E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_24560 f1dee61c76d72f099fa40f7950639267 223 SMART SM00895 89 214 1.1E-16 T 14-10-2018 IPR011711 GntR, C-terminal AMIS_24560 f1dee61c76d72f099fa40f7950639267 223 Gene3D G3DSA:1.10.10.10 1 66 2.8E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_24560 f1dee61c76d72f099fa40f7950639267 223 SUPERFAMILY SSF46785 1 72 1.57E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_24560 f1dee61c76d72f099fa40f7950639267 223 Gene3D G3DSA:1.20.120.530 73 221 4.0E-23 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AMIS_24560 f1dee61c76d72f099fa40f7950639267 223 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 50 1.9E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_24560 f1dee61c76d72f099fa40f7950639267 223 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 20 34 1.9E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_24560 f1dee61c76d72f099fa40f7950639267 223 SUPERFAMILY SSF48008 85 219 6.28E-21 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AMIS_24560 f1dee61c76d72f099fa40f7950639267 223 Pfam PF00392 Bacterial regulatory proteins, gntR family 1 60 4.2E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_67580 169ebd6614d71d76cfe77bbcd3a22bfb 343 SUPERFAMILY SSF47413 4 62 4.51E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_67580 169ebd6614d71d76cfe77bbcd3a22bfb 343 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 14-10-2018 AMIS_67580 169ebd6614d71d76cfe77bbcd3a22bfb 343 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 6 16 7.5E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_67580 169ebd6614d71d76cfe77bbcd3a22bfb 343 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 16 26 7.5E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_67580 169ebd6614d71d76cfe77bbcd3a22bfb 343 SMART SM00354 4 74 6.4E-25 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_67580 169ebd6614d71d76cfe77bbcd3a22bfb 343 Gene3D G3DSA:1.10.260.40 1 61 1.0E-22 T 14-10-2018 AMIS_67580 169ebd6614d71d76cfe77bbcd3a22bfb 343 Gene3D G3DSA:3.40.50.2300 62 316 3.5E-71 T 14-10-2018 AMIS_67580 169ebd6614d71d76cfe77bbcd3a22bfb 343 Pfam PF13377 Periplasmic binding protein-like domain 171 336 2.6E-35 T 14-10-2018 AMIS_67580 169ebd6614d71d76cfe77bbcd3a22bfb 343 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 1.0E-16 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_67580 169ebd6614d71d76cfe77bbcd3a22bfb 343 Gene3D G3DSA:3.40.50.2300 162 296 3.5E-71 T 14-10-2018 AMIS_67580 169ebd6614d71d76cfe77bbcd3a22bfb 343 SUPERFAMILY SSF53822 65 337 3.34E-61 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_77870 2c47ecde7ef87b711a735e90a7b291ce 120 TIGRFAM TIGR00526 folB_dom: FolB domain 5 119 8.5E-31 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AMIS_77870 2c47ecde7ef87b711a735e90a7b291ce 120 SMART SM00905 5 117 1.7E-48 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AMIS_77870 2c47ecde7ef87b711a735e90a7b291ce 120 SUPERFAMILY SSF55620 4 118 2.17E-34 T 14-10-2018 AMIS_77870 2c47ecde7ef87b711a735e90a7b291ce 120 Gene3D G3DSA:3.30.1130.10 1 119 8.7E-41 T 14-10-2018 AMIS_77870 2c47ecde7ef87b711a735e90a7b291ce 120 Pfam PF02152 Dihydroneopterin aldolase 5 115 1.7E-32 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AMIS_77870 2c47ecde7ef87b711a735e90a7b291ce 120 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 5 117 1.9E-34 T 14-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AMIS_30910 5cd925074c9440964d0bfb245bfc04e6 262 Gene3D G3DSA:2.40.10.10 57 262 6.4E-46 T 14-10-2018 AMIS_30910 5cd925074c9440964d0bfb245bfc04e6 262 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 68 73 - T 14-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 AMIS_30910 5cd925074c9440964d0bfb245bfc04e6 262 Pfam PF00089 Trypsin 32 254 9.2E-37 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 AMIS_30910 5cd925074c9440964d0bfb245bfc04e6 262 SUPERFAMILY SSF50494 17 259 1.03E-52 T 14-10-2018 IPR009003 Peptidase S1, PA clan AMIS_30910 5cd925074c9440964d0bfb245bfc04e6 262 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 201 213 2.6E-13 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AMIS_30910 5cd925074c9440964d0bfb245bfc04e6 262 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 58 73 2.6E-13 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AMIS_30910 5cd925074c9440964d0bfb245bfc04e6 262 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 118 132 2.6E-13 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AMIS_30910 5cd925074c9440964d0bfb245bfc04e6 262 SMART SM00020 26 254 4.4E-47 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 AMIS_9250 c4fc94ab12ba8fff58863d149c221082 1418 SUPERFAMILY SSF52980 1310 1384 5.36E-7 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AMIS_9250 c4fc94ab12ba8fff58863d149c221082 1418 SUPERFAMILY SSF52540 352 1275 7.03E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_9250 c4fc94ab12ba8fff58863d149c221082 1418 Gene3D G3DSA:3.40.50.300 1110 1296 3.4E-24 T 14-10-2018 AMIS_9250 c4fc94ab12ba8fff58863d149c221082 1418 Pfam PF13087 AAA domain 1091 1275 2.1E-15 T 14-10-2018 AMIS_9250 c4fc94ab12ba8fff58863d149c221082 1418 Gene3D G3DSA:3.40.50.300 910 1105 2.1E-10 T 14-10-2018 AMIS_9250 c4fc94ab12ba8fff58863d149c221082 1418 Gene3D G3DSA:3.40.50.300 298 493 6.8E-16 T 14-10-2018 AMIS_9250 c4fc94ab12ba8fff58863d149c221082 1418 Pfam PF13604 AAA domain 354 416 3.0E-7 T 14-10-2018 AMIS_9250 c4fc94ab12ba8fff58863d149c221082 1418 Gene3D G3DSA:3.40.960.10 1311 1415 6.5E-15 T 14-10-2018 AMIS_6250 a5b21459f9e8fbdddefa43958f9c83b3 277 Pfam PF00557 Metallopeptidase family M24 17 249 1.0E-42 T 14-10-2018 IPR000994 Peptidase M24 AMIS_6250 a5b21459f9e8fbdddefa43958f9c83b3 277 SUPERFAMILY SSF55920 9 259 4.45E-72 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like AMIS_6250 a5b21459f9e8fbdddefa43958f9c83b3 277 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 178 196 - T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AMIS_6250 a5b21459f9e8fbdddefa43958f9c83b3 277 Gene3D G3DSA:3.90.230.10 1 261 5.5E-88 T 14-10-2018 AMIS_6250 a5b21459f9e8fbdddefa43958f9c83b3 277 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 8 259 1.3E-78 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AMIS_6250 a5b21459f9e8fbdddefa43958f9c83b3 277 Hamap MF_01974 Methionine aminopeptidase [map]. 8 261 36.217 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AMIS_6250 a5b21459f9e8fbdddefa43958f9c83b3 277 PRINTS PR00599 Methionine aminopeptidase-1 signature 73 86 5.0E-20 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AMIS_6250 a5b21459f9e8fbdddefa43958f9c83b3 277 PRINTS PR00599 Methionine aminopeptidase-1 signature 96 112 5.0E-20 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AMIS_6250 a5b21459f9e8fbdddefa43958f9c83b3 277 PRINTS PR00599 Methionine aminopeptidase-1 signature 172 184 5.0E-20 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AMIS_6250 a5b21459f9e8fbdddefa43958f9c83b3 277 PRINTS PR00599 Methionine aminopeptidase-1 signature 203 215 5.0E-20 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AMIS_1230 1f51297075a9dfffe135b5c8882c4697 383 Gene3D G3DSA:3.30.1330.10 34 200 3.3E-62 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AMIS_1230 1f51297075a9dfffe135b5c8882c4697 383 SUPERFAMILY SSF56042 202 375 2.69E-54 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AMIS_1230 1f51297075a9dfffe135b5c8882c4697 383 SUPERFAMILY SSF55326 36 199 1.29E-46 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AMIS_1230 1f51297075a9dfffe135b5c8882c4697 383 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 36 377 41.908 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AMIS_1230 1f51297075a9dfffe135b5c8882c4697 383 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 37 369 9.7E-133 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AMIS_1230 1f51297075a9dfffe135b5c8882c4697 383 Gene3D G3DSA:3.90.650.10 202 380 2.2E-61 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AMIS_1230 1f51297075a9dfffe135b5c8882c4697 383 Pfam PF02769 AIR synthase related protein, C-terminal domain 207 373 1.8E-32 T 14-10-2018 IPR010918 PurM-like, C-terminal domain AMIS_1230 1f51297075a9dfffe135b5c8882c4697 383 Pfam PF00586 AIR synthase related protein, N-terminal domain 90 194 9.6E-17 T 14-10-2018 IPR016188 PurM-like, N-terminal domain AMIS_49440 5914d06220ac75a46769c3e25d23fdbb 859 Gene3D G3DSA:3.10.20.30 1 70 1.7E-23 T 14-10-2018 IPR012675 Beta-grasp domain superfamily AMIS_49440 5914d06220ac75a46769c3e25d23fdbb 859 SUPERFAMILY SSF56003 276 857 7.07E-164 T 14-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 AMIS_49440 5914d06220ac75a46769c3e25d23fdbb 859 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 35 43 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AMIS_49440 5914d06220ac75a46769c3e25d23fdbb 859 Gene3D G3DSA:3.30.365.10 147 701 5.0E-163 T 14-10-2018 AMIS_49440 5914d06220ac75a46769c3e25d23fdbb 859 SUPERFAMILY SSF54665 157 303 3.4E-39 T 14-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily AMIS_49440 5914d06220ac75a46769c3e25d23fdbb 859 Gene3D G3DSA:1.10.150.120 71 146 3.7E-25 T 14-10-2018 AMIS_49440 5914d06220ac75a46769c3e25d23fdbb 859 Pfam PF01799 [2Fe-2S] binding domain 69 137 1.1E-25 T 14-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AMIS_49440 5914d06220ac75a46769c3e25d23fdbb 859 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 171 283 3.2E-28 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AMIS_49440 5914d06220ac75a46769c3e25d23fdbb 859 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 704 797 2.8E-25 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMIS_49440 5914d06220ac75a46769c3e25d23fdbb 859 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 318 699 6.3E-112 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMIS_49440 5914d06220ac75a46769c3e25d23fdbb 859 SUPERFAMILY SSF47741 80 139 7.2E-23 T 14-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily AMIS_49440 5914d06220ac75a46769c3e25d23fdbb 859 Gene3D G3DSA:3.30.365.20 702 859 7.3E-51 T 14-10-2018 AMIS_49440 5914d06220ac75a46769c3e25d23fdbb 859 SMART SM01008 171 283 1.7E-46 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AMIS_49440 5914d06220ac75a46769c3e25d23fdbb 859 SUPERFAMILY SSF54292 3 83 3.67E-18 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AMIS_32280 aeda6799ade8dff288f985946943ee6c 477 Gene3D G3DSA:1.20.1720.10 14 223 2.0E-42 T 14-10-2018 AMIS_32280 aeda6799ade8dff288f985946943ee6c 477 SUPERFAMILY SSF103473 9 463 1.24E-67 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_32280 aeda6799ade8dff288f985946943ee6c 477 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 15 418 1.8E-74 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 AMIS_32280 aeda6799ade8dff288f985946943ee6c 477 Pfam PF07690 Major Facilitator Superfamily 18 410 3.5E-60 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_32280 aeda6799ade8dff288f985946943ee6c 477 ProSitePatterns PS00216 Sugar transport proteins signature 1. 68 85 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AMIS_32280 aeda6799ade8dff288f985946943ee6c 477 Gene3D G3DSA:1.20.1250.20 259 464 1.6E-21 T 14-10-2018 AMIS_27720 0ac7d80fcaf4c548c6d9bbc2ba575443 116 Pfam PF13564 DoxX-like family 8 108 3.7E-16 T 14-10-2018 IPR032808 DoxX family AMIS_64230 81bb9f00efc0428a3f8f7ca330d58fc2 427 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 95 328 2.2E-39 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 AMIS_64230 81bb9f00efc0428a3f8f7ca330d58fc2 427 Gene3D G3DSA:3.40.710.10 71 382 1.1E-75 T 14-10-2018 AMIS_64230 81bb9f00efc0428a3f8f7ca330d58fc2 427 SUPERFAMILY SSF56601 90 347 5.2E-49 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMIS_64230 81bb9f00efc0428a3f8f7ca330d58fc2 427 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 177 194 1.3E-8 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AMIS_64230 81bb9f00efc0428a3f8f7ca330d58fc2 427 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 127 138 1.3E-8 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AMIS_64230 81bb9f00efc0428a3f8f7ca330d58fc2 427 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 208 221 1.3E-8 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AMIS_44080 b06d78db504b24968e1cfff42003c72d 321 SUPERFAMILY SSF51735 1 270 3.97E-58 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_44080 b06d78db504b24968e1cfff42003c72d 321 Gene3D G3DSA:3.40.50.720 2 272 4.6E-60 T 14-10-2018 AMIS_44080 b06d78db504b24968e1cfff42003c72d 321 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 156 184 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMIS_44080 b06d78db504b24968e1cfff42003c72d 321 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 188 5.2E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_44080 b06d78db504b24968e1cfff42003c72d 321 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 143 159 5.2E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_44080 b06d78db504b24968e1cfff42003c72d 321 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 5.2E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_44080 b06d78db504b24968e1cfff42003c72d 321 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 96 107 5.2E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_44080 b06d78db504b24968e1cfff42003c72d 321 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 191 208 5.2E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_44080 b06d78db504b24968e1cfff42003c72d 321 Pfam PF00106 short chain dehydrogenase 9 212 4.0E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_47690 2e61ed8e5cca823e49d022115c3b102e 153 Gene3D G3DSA:1.10.10.10 2 53 2.0E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_47690 2e61ed8e5cca823e49d022115c3b102e 153 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AMIS_47690 2e61ed8e5cca823e49d022115c3b102e 153 SUPERFAMILY SSF54909 61 144 1.47E-12 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel AMIS_47690 2e61ed8e5cca823e49d022115c3b102e 153 SMART SM00344 3 108 4.6E-36 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AMIS_47690 2e61ed8e5cca823e49d022115c3b102e 153 SUPERFAMILY SSF46785 2 59 6.43E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_47690 2e61ed8e5cca823e49d022115c3b102e 153 Pfam PF01037 Lrp/AsnC ligand binding domain 74 137 2.7E-11 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMIS_47690 2e61ed8e5cca823e49d022115c3b102e 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 1.3E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMIS_47690 2e61ed8e5cca823e49d022115c3b102e 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 1.3E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMIS_47690 2e61ed8e5cca823e49d022115c3b102e 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 1.3E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMIS_47690 2e61ed8e5cca823e49d022115c3b102e 153 Gene3D G3DSA:3.30.70.920 54 134 1.1E-18 T 14-10-2018 AMIS_47690 2e61ed8e5cca823e49d022115c3b102e 153 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 47 1.5E-16 T 14-10-2018 AMIS_17480 72f40b8c3379ede0d893b1afcba3111f 832 Gene3D G3DSA:3.40.50.300 1 210 3.9E-100 T 14-10-2018 AMIS_17480 72f40b8c3379ede0d893b1afcba3111f 832 Gene3D G3DSA:3.40.50.620 218 354 6.9E-8 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMIS_17480 72f40b8c3379ede0d893b1afcba3111f 832 Pfam PF00582 Universal stress protein family 231 354 2.0E-7 T 14-10-2018 IPR006016 UspA AMIS_17480 72f40b8c3379ede0d893b1afcba3111f 832 SUPERFAMILY SSF47384 601 678 7.85E-16 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_17480 72f40b8c3379ede0d893b1afcba3111f 832 Gene3D G3DSA:3.30.565.10 685 830 2.3E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_17480 72f40b8c3379ede0d893b1afcba3111f 832 SMART SM00387 720 830 1.3E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_17480 72f40b8c3379ede0d893b1afcba3111f 832 SMART SM00388 610 678 2.7E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_17480 72f40b8c3379ede0d893b1afcba3111f 832 SUPERFAMILY SSF52402 232 340 2.15E-10 T 14-10-2018 AMIS_17480 72f40b8c3379ede0d893b1afcba3111f 832 Gene3D G3DSA:1.20.120.620 378 481 4.6E-14 T 14-10-2018 IPR038318 KdpD, transmembrane domain superfamily AMIS_17480 72f40b8c3379ede0d893b1afcba3111f 832 Pfam PF00512 His Kinase A (phospho-acceptor) domain 611 678 7.5E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_17480 72f40b8c3379ede0d893b1afcba3111f 832 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 3 211 6.9E-100 T 14-10-2018 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 AMIS_17480 72f40b8c3379ede0d893b1afcba3111f 832 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 721 828 2.1E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_17480 72f40b8c3379ede0d893b1afcba3111f 832 PRINTS PR00344 Bacterial sensor protein C-terminal signature 790 808 7.9E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_17480 72f40b8c3379ede0d893b1afcba3111f 832 PRINTS PR00344 Bacterial sensor protein C-terminal signature 814 827 7.9E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_17480 72f40b8c3379ede0d893b1afcba3111f 832 PRINTS PR00344 Bacterial sensor protein C-terminal signature 757 771 7.9E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_17480 72f40b8c3379ede0d893b1afcba3111f 832 Pfam PF13493 Domain of unknown function (DUF4118) 383 486 2.1E-25 T 14-10-2018 IPR025201 Sensor protein KdpD, transmembrane domain AMIS_17480 72f40b8c3379ede0d893b1afcba3111f 832 Gene3D G3DSA:1.10.287.130 601 677 1.9E-16 T 14-10-2018 AMIS_17480 72f40b8c3379ede0d893b1afcba3111f 832 SUPERFAMILY SSF55874 668 828 1.7E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_69730 9d1990503a2cc2b94d2e5b32f8ce58b8 759 SUPERFAMILY SSF55874 665 756 2.46E-9 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_69730 9d1990503a2cc2b94d2e5b32f8ce58b8 759 Gene3D G3DSA:3.30.565.10 635 758 4.3E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_69730 9d1990503a2cc2b94d2e5b32f8ce58b8 759 Gene3D G3DSA:3.30.450.20 31 153 1.2E-19 T 14-10-2018 AMIS_69730 9d1990503a2cc2b94d2e5b32f8ce58b8 759 SMART SM00331 418 632 3.2E-40 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_69730 9d1990503a2cc2b94d2e5b32f8ce58b8 759 Pfam PF13581 Histidine kinase-like ATPase domain 643 753 3.6E-12 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_69730 9d1990503a2cc2b94d2e5b32f8ce58b8 759 SUPERFAMILY SSF55785 46 137 7.12E-6 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_69730 9d1990503a2cc2b94d2e5b32f8ce58b8 759 Pfam PF08448 PAS fold 52 145 7.0E-8 T 14-10-2018 IPR013656 PAS fold-4 AMIS_69730 9d1990503a2cc2b94d2e5b32f8ce58b8 759 SUPERFAMILY SSF81606 436 629 5.75E-8 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_69730 9d1990503a2cc2b94d2e5b32f8ce58b8 759 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 447 631 6.9E-48 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_69730 9d1990503a2cc2b94d2e5b32f8ce58b8 759 Gene3D G3DSA:3.60.40.10 390 632 2.5E-62 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_41970 18a60ec4cab36311388e0bc6588a8a4e 176 Pfam PF08281 Sigma-70, region 4 111 163 2.1E-12 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_41970 18a60ec4cab36311388e0bc6588a8a4e 176 SUPERFAMILY SSF88659 107 168 2.43E-14 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_41970 18a60ec4cab36311388e0bc6588a8a4e 176 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 167 2.6E-20 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_41970 18a60ec4cab36311388e0bc6588a8a4e 176 Pfam PF04542 Sigma-70 region 2 24 90 2.9E-10 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_41970 18a60ec4cab36311388e0bc6588a8a4e 176 Gene3D G3DSA:1.10.10.10 88 169 6.9E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_41970 18a60ec4cab36311388e0bc6588a8a4e 176 Gene3D G3DSA:1.10.1740.10 11 87 2.4E-13 T 14-10-2018 AMIS_41970 18a60ec4cab36311388e0bc6588a8a4e 176 SUPERFAMILY SSF88946 17 94 1.26E-13 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_49910 413d255386acc8d440c124558cf00452 216 SUPERFAMILY SSF50475 11 201 4.07E-31 T 14-10-2018 AMIS_49910 413d255386acc8d440c124558cf00452 216 Pfam PF01613 Flavin reductase like domain 16 166 1.1E-11 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 AMIS_49910 413d255386acc8d440c124558cf00452 216 Gene3D G3DSA:2.30.110.10 9 200 7.5E-39 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AMIS_16480 a75e071ffb3dad9134412e0c41ffe229 215 Pfam PF13419 Haloacid dehalogenase-like hydrolase 104 183 6.5E-12 T 14-10-2018 AMIS_16480 a75e071ffb3dad9134412e0c41ffe229 215 Gene3D G3DSA:3.40.50.1000 4 190 7.3E-28 T 14-10-2018 IPR023214 HAD superfamily AMIS_16480 a75e071ffb3dad9134412e0c41ffe229 215 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 100 178 1.7E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMIS_16480 a75e071ffb3dad9134412e0c41ffe229 215 SUPERFAMILY SSF56784 5 204 4.7E-28 T 14-10-2018 IPR036412 HAD-like superfamily AMIS_16480 a75e071ffb3dad9134412e0c41ffe229 215 Gene3D G3DSA:1.10.150.520 15 84 7.3E-28 T 14-10-2018 AMIS_34990 78988430032eec98c590199f12d0df49 379 Pfam PF01494 FAD binding domain 294 345 3.3E-7 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 AMIS_34990 78988430032eec98c590199f12d0df49 379 Pfam PF01494 FAD binding domain 11 174 2.6E-9 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 AMIS_34990 78988430032eec98c590199f12d0df49 379 Gene3D G3DSA:3.50.50.60 6 371 3.9E-106 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_34990 78988430032eec98c590199f12d0df49 379 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 2.0E-16 T 14-10-2018 AMIS_34990 78988430032eec98c590199f12d0df49 379 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 295 310 2.0E-16 T 14-10-2018 AMIS_34990 78988430032eec98c590199f12d0df49 379 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 153 168 2.0E-16 T 14-10-2018 AMIS_34990 78988430032eec98c590199f12d0df49 379 SUPERFAMILY SSF51905 12 363 2.33E-44 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_3320 8dfd7f9050ea3f84c9e2dbea28414a1f 401 SUPERFAMILY SSF51419 27 277 2.24E-20 T 14-10-2018 IPR029066 PLP-binding barrel AMIS_3320 8dfd7f9050ea3f84c9e2dbea28414a1f 401 Pfam PF01168 Alanine racemase, N-terminal domain 26 275 4.5E-15 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMIS_3320 8dfd7f9050ea3f84c9e2dbea28414a1f 401 Gene3D G3DSA:3.20.20.10 29 273 4.0E-52 T 14-10-2018 IPR029066 PLP-binding barrel AMIS_25270 84a185d18312f108e9e022e583b8d192 308 Gene3D G3DSA:3.40.50.720 114 255 2.2E-29 T 14-10-2018 AMIS_25270 84a185d18312f108e9e022e583b8d192 308 Gene3D G3DSA:3.90.180.10 78 296 2.2E-29 T 14-10-2018 AMIS_25270 84a185d18312f108e9e022e583b8d192 308 SUPERFAMILY SSF51735 107 282 1.0E-24 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_25270 84a185d18312f108e9e022e583b8d192 308 Pfam PF00107 Zinc-binding dehydrogenase 146 217 6.5E-8 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMIS_25270 84a185d18312f108e9e022e583b8d192 308 SUPERFAMILY SSF50129 1 137 3.21E-13 T 14-10-2018 IPR011032 GroES-like superfamily AMIS_25270 84a185d18312f108e9e022e583b8d192 308 ProSitePatterns PS00318 Hydroxymethylglutaryl-coenzyme A reductases signature 2. 229 236 - T 14-10-2018 IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AMIS_25270 84a185d18312f108e9e022e583b8d192 308 Gene3D G3DSA:3.90.180.10 1 67 1.5E-6 T 14-10-2018 AMIS_21790 8f61fb7c8747483896546c872e29b523 360 Pfam PF00107 Zinc-binding dehydrogenase 190 316 1.1E-22 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMIS_21790 8f61fb7c8747483896546c872e29b523 360 SUPERFAMILY SSF51735 151 326 6.84E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_21790 8f61fb7c8747483896546c872e29b523 360 Gene3D G3DSA:3.90.180.10 19 356 7.1E-110 T 14-10-2018 AMIS_21790 8f61fb7c8747483896546c872e29b523 360 SMART SM00829 10 358 1.6E-8 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMIS_21790 8f61fb7c8747483896546c872e29b523 360 Gene3D G3DSA:3.40.50.720 167 302 7.1E-110 T 14-10-2018 AMIS_21790 8f61fb7c8747483896546c872e29b523 360 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 146 1.7E-27 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMIS_21790 8f61fb7c8747483896546c872e29b523 360 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 60 74 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AMIS_21790 8f61fb7c8747483896546c872e29b523 360 SUPERFAMILY SSF50129 1 186 1.42E-48 T 14-10-2018 IPR011032 GroES-like superfamily AMIS_25980 044f08039be872e6960d8513f235b56f 136 SUPERFAMILY SSF46785 18 132 6.07E-36 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_25980 044f08039be872e6960d8513f235b56f 136 Gene3D G3DSA:1.10.10.10 4 133 2.9E-43 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_25980 044f08039be872e6960d8513f235b56f 136 Pfam PF01638 HxlR-like helix-turn-helix 33 120 4.4E-28 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type AMIS_68350 f2e1d8df4c9e28f3aa9865f78110ac39 686 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 323 502 1.4E-57 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AMIS_68350 f2e1d8df4c9e28f3aa9865f78110ac39 686 Pfam PF00378 Enoyl-CoA hydratase/isomerase 37 220 6.1E-23 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AMIS_68350 f2e1d8df4c9e28f3aa9865f78110ac39 686 Gene3D G3DSA:1.10.1040.50 586 679 4.1E-13 T 14-10-2018 AMIS_68350 f2e1d8df4c9e28f3aa9865f78110ac39 686 Gene3D G3DSA:1.10.1040.50 508 585 8.2E-12 T 14-10-2018 AMIS_68350 f2e1d8df4c9e28f3aa9865f78110ac39 686 Gene3D G3DSA:3.40.50.720 312 507 9.5E-63 T 14-10-2018 AMIS_68350 f2e1d8df4c9e28f3aa9865f78110ac39 686 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 506 585 3.2E-10 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AMIS_68350 f2e1d8df4c9e28f3aa9865f78110ac39 686 SUPERFAMILY SSF48179 504 585 2.21E-10 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMIS_68350 f2e1d8df4c9e28f3aa9865f78110ac39 686 SUPERFAMILY SSF52096 23 303 5.15E-41 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMIS_68350 f2e1d8df4c9e28f3aa9865f78110ac39 686 SUPERFAMILY SSF51735 320 504 1.91E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_68350 f2e1d8df4c9e28f3aa9865f78110ac39 686 SUPERFAMILY SSF48179 610 671 1.36E-10 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMIS_68350 f2e1d8df4c9e28f3aa9865f78110ac39 686 Gene3D G3DSA:3.90.226.10 14 311 4.8E-57 T 14-10-2018 AMIS_970 acb57539a541c1106600613cacefa305 224 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 11 192 4.2E-37 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal AMIS_970 acb57539a541c1106600613cacefa305 224 SUPERFAMILY SSF53639 7 202 1.67E-42 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily AMIS_970 acb57539a541c1106600613cacefa305 224 Gene3D G3DSA:3.40.225.10 6 216 7.4E-47 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily AMIS_970 acb57539a541c1106600613cacefa305 224 SMART SM01007 10 194 1.4E-37 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal AMIS_75730 ea034b6529d4ce2f4f3f6d43f2fb9de1 318 Gene3D G3DSA:3.40.50.720 96 237 7.1E-39 T 14-10-2018 AMIS_75730 ea034b6529d4ce2f4f3f6d43f2fb9de1 318 SUPERFAMILY SSF51735 99 245 2.04E-29 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_75730 ea034b6529d4ce2f4f3f6d43f2fb9de1 318 SUPERFAMILY SSF81324 4 124 2.75E-19 T 14-10-2018 AMIS_75730 ea034b6529d4ce2f4f3f6d43f2fb9de1 318 Gene3D G3DSA:1.10.287.70 1 95 1.4E-13 T 14-10-2018 AMIS_75730 ea034b6529d4ce2f4f3f6d43f2fb9de1 318 Pfam PF07885 Ion channel 3 83 2.3E-13 T 14-10-2018 IPR013099 Potassium channel domain AMIS_75730 ea034b6529d4ce2f4f3f6d43f2fb9de1 318 Pfam PF02254 TrkA-N domain 104 222 2.1E-27 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AMIS_47270 4300bb181e1bb8f78f4ad1d67ffe0bd6 523 SUPERFAMILY SSF51395 15 468 1.78E-109 T 14-10-2018 AMIS_47270 4300bb181e1bb8f78f4ad1d67ffe0bd6 523 PIRSF PIRSF006429 4 518 1.2E-138 T 14-10-2018 IPR024188 Glutamate synthase large subunit-like protein AMIS_47270 4300bb181e1bb8f78f4ad1d67ffe0bd6 523 Pfam PF01645 Conserved region in glutamate synthase 137 457 1.2E-74 T 14-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 AMIS_47270 4300bb181e1bb8f78f4ad1d67ffe0bd6 523 Gene3D G3DSA:3.20.20.70 130 480 3.9E-90 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_49400 b34f142b8387404d17ea5baf54b86968 519 Gene3D G3DSA:3.40.50.300 263 512 7.8E-40 T 14-10-2018 AMIS_49400 b34f142b8387404d17ea5baf54b86968 519 ProSitePatterns PS00211 ABC transporters family signature. 415 429 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_49400 b34f142b8387404d17ea5baf54b86968 519 SMART SM00382 295 491 1.8E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_49400 b34f142b8387404d17ea5baf54b86968 519 SMART SM00382 35 233 1.9E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_49400 b34f142b8387404d17ea5baf54b86968 519 Gene3D G3DSA:3.40.50.300 1 238 3.4E-53 T 14-10-2018 AMIS_49400 b34f142b8387404d17ea5baf54b86968 519 Pfam PF00005 ABC transporter 26 177 1.3E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_49400 b34f142b8387404d17ea5baf54b86968 519 SUPERFAMILY SSF52540 254 502 1.07E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_49400 b34f142b8387404d17ea5baf54b86968 519 Pfam PF00005 ABC transporter 287 442 2.9E-16 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_49400 b34f142b8387404d17ea5baf54b86968 519 SUPERFAMILY SSF52540 9 232 4.37E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_43340 cca63a15689099dd7ef913db616acb87 901 SUPERFAMILY SSF46894 836 896 3.4E-18 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_43340 cca63a15689099dd7ef913db616acb87 901 Gene3D G3DSA:1.10.10.10 820 899 4.1E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_43340 cca63a15689099dd7ef913db616acb87 901 Pfam PF00196 Bacterial regulatory proteins, luxR family 843 895 3.0E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_43340 cca63a15689099dd7ef913db616acb87 901 SUPERFAMILY SSF48452 367 622 7.6E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_43340 cca63a15689099dd7ef913db616acb87 901 SMART SM00421 841 898 3.3E-21 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_43340 cca63a15689099dd7ef913db616acb87 901 Pfam PF13191 AAA ATPase domain 2 138 6.1E-17 T 14-10-2018 AMIS_43340 cca63a15689099dd7ef913db616acb87 901 SUPERFAMILY SSF52540 1 221 3.45E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_43340 cca63a15689099dd7ef913db616acb87 901 Gene3D G3DSA:3.40.50.300 1 165 8.8E-8 T 14-10-2018 AMIS_43340 cca63a15689099dd7ef913db616acb87 901 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 858 874 6.2E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_43340 cca63a15689099dd7ef913db616acb87 901 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 874 886 6.2E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_43340 cca63a15689099dd7ef913db616acb87 901 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 844 858 6.2E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_46090 c99b5f2a8751be761671dfc7d9b0dc75 517 SUPERFAMILY SSF117892 70 210 2.09E-27 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily AMIS_46090 c99b5f2a8751be761671dfc7d9b0dc75 517 Pfam PF01145 SPFH domain / Band 7 family 29 219 4.3E-20 T 14-10-2018 IPR001107 Band 7 domain AMIS_46090 c99b5f2a8751be761671dfc7d9b0dc75 517 Pfam PF15975 Flotillin 376 461 8.8E-10 T 14-10-2018 IPR031905 Flotillin, C-terminal domain Reactome: R-HSA-8849932 AMIS_46090 c99b5f2a8751be761671dfc7d9b0dc75 517 SMART SM00244 24 204 0.0035 T 14-10-2018 IPR001107 Band 7 domain AMIS_46090 c99b5f2a8751be761671dfc7d9b0dc75 517 Gene3D G3DSA:3.30.479.30 79 192 4.9E-29 T 14-10-2018 AMIS_55690 3873b66e028de82c299d91dcbd76f0a0 330 Pfam PF13407 Periplasmic binding protein domain 45 302 4.5E-47 T 14-10-2018 IPR025997 Periplasmic binding protein AMIS_55690 3873b66e028de82c299d91dcbd76f0a0 330 SUPERFAMILY SSF53822 40 323 4.87E-71 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_55690 3873b66e028de82c299d91dcbd76f0a0 330 Gene3D G3DSA:3.40.50.2300 44 300 2.6E-100 T 14-10-2018 AMIS_55690 3873b66e028de82c299d91dcbd76f0a0 330 Gene3D G3DSA:3.40.50.2300 145 285 2.6E-100 T 14-10-2018 AMIS_38740 8c9289d41145e7b17250fa490e1316a5 343 Gene3D G3DSA:3.40.50.2300 61 319 1.2E-66 T 14-10-2018 AMIS_38740 8c9289d41145e7b17250fa490e1316a5 343 Pfam PF13377 Periplasmic binding protein-like domain 185 342 7.7E-36 T 14-10-2018 AMIS_38740 8c9289d41145e7b17250fa490e1316a5 343 Gene3D G3DSA:3.40.50.2300 176 303 1.2E-66 T 14-10-2018 AMIS_38740 8c9289d41145e7b17250fa490e1316a5 343 SUPERFAMILY SSF53822 87 340 2.04E-59 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_38740 8c9289d41145e7b17250fa490e1316a5 343 SUPERFAMILY SSF47413 6 64 1.96E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_38740 8c9289d41145e7b17250fa490e1316a5 343 ProSitePatterns PS00356 LacI-type HTH domain signature. 9 27 - T 14-10-2018 AMIS_38740 8c9289d41145e7b17250fa490e1316a5 343 Gene3D G3DSA:1.10.260.40 7 60 4.4E-21 T 14-10-2018 AMIS_38740 8c9289d41145e7b17250fa490e1316a5 343 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 53 1.9E-14 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_38740 8c9289d41145e7b17250fa490e1316a5 343 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 8 18 1.3E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_38740 8c9289d41145e7b17250fa490e1316a5 343 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 18 28 1.3E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_38740 8c9289d41145e7b17250fa490e1316a5 343 SMART SM00354 6 76 1.4E-24 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_73060 84b3f25b0f38e2387080dec7d76ee6dd 438 Gene3D G3DSA:3.65.10.10 28 245 2.0E-131 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 AMIS_73060 84b3f25b0f38e2387080dec7d76ee6dd 438 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 21 436 1.6E-110 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AMIS_73060 84b3f25b0f38e2387080dec7d76ee6dd 438 SUPERFAMILY SSF55205 15 434 6.87E-99 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 AMIS_73060 84b3f25b0f38e2387080dec7d76ee6dd 438 Gene3D G3DSA:3.65.10.10 20 427 2.0E-131 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 AMIS_73060 84b3f25b0f38e2387080dec7d76ee6dd 438 PIRSF PIRSF000505 9 438 1.3E-114 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AMIS_73060 84b3f25b0f38e2387080dec7d76ee6dd 438 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 15 429 5.9E-103 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AMIS_73060 84b3f25b0f38e2387080dec7d76ee6dd 438 ProSitePatterns PS00885 EPSP synthase signature 2. 350 368 - T 14-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AMIS_73060 84b3f25b0f38e2387080dec7d76ee6dd 438 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 16 437 29.147 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AMIS_62960 562ec4c91ce72f0257cff070752742f3 641 SUPERFAMILY SSF55186 43 233 2.62E-52 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 AMIS_62960 562ec4c91ce72f0257cff070752742f3 641 SMART SM00863 136 212 6.7E-18 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 AMIS_62960 562ec4c91ce72f0257cff070752742f3 641 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 46 632 31.901 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AMIS_62960 562ec4c91ce72f0257cff070752742f3 641 PRINTS PR01047 Threonyl-tRNA synthetase signature 462 490 3.2E-47 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AMIS_62960 562ec4c91ce72f0257cff070752742f3 641 PRINTS PR01047 Threonyl-tRNA synthetase signature 324 352 3.2E-47 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AMIS_62960 562ec4c91ce72f0257cff070752742f3 641 PRINTS PR01047 Threonyl-tRNA synthetase signature 357 380 3.2E-47 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AMIS_62960 562ec4c91ce72f0257cff070752742f3 641 PRINTS PR01047 Threonyl-tRNA synthetase signature 532 544 3.2E-47 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AMIS_62960 562ec4c91ce72f0257cff070752742f3 641 PRINTS PR01047 Threonyl-tRNA synthetase signature 505 518 3.2E-47 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AMIS_62960 562ec4c91ce72f0257cff070752742f3 641 Gene3D G3DSA:3.30.930.10 218 530 1.5E-111 T 14-10-2018 AMIS_62960 562ec4c91ce72f0257cff070752742f3 641 Gene3D G3DSA:3.40.50.800 531 637 6.8E-27 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily AMIS_62960 562ec4c91ce72f0257cff070752742f3 641 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 319 527 1.2E-33 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMIS_62960 562ec4c91ce72f0257cff070752742f3 641 SUPERFAMILY SSF52954 527 632 7.55E-29 T 14-10-2018 AMIS_62960 562ec4c91ce72f0257cff070752742f3 641 Pfam PF03129 Anticodon binding domain 539 627 9.8E-20 T 14-10-2018 IPR004154 Anticodon-binding AMIS_62960 562ec4c91ce72f0257cff070752742f3 641 Gene3D G3DSA:3.30.980.10 49 215 6.9E-57 T 14-10-2018 AMIS_62960 562ec4c91ce72f0257cff070752742f3 641 Gene3D G3DSA:3.30.54.20 110 180 6.9E-57 T 14-10-2018 AMIS_62960 562ec4c91ce72f0257cff070752742f3 641 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 168 212 9.3E-13 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 AMIS_62960 562ec4c91ce72f0257cff070752742f3 641 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 52 627 2.1E-191 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AMIS_62960 562ec4c91ce72f0257cff070752742f3 641 SUPERFAMILY SSF55681 236 524 3.19E-88 T 14-10-2018 AMIS_39040 989e84719bb5180479ba74217f17930f 156 SUPERFAMILY SSF46785 12 142 1.52E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_39040 989e84719bb5180479ba74217f17930f 156 ProSitePatterns PS01117 MarR-type HTH domain signature. 66 100 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site AMIS_39040 989e84719bb5180479ba74217f17930f 156 SMART SM00347 26 127 1.7E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_39040 989e84719bb5180479ba74217f17930f 156 Pfam PF12802 MarR family 40 91 2.1E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_39040 989e84719bb5180479ba74217f17930f 156 Gene3D G3DSA:1.10.10.10 5 142 1.5E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_72180 596420d4107750f314d3cc2787bbc7dd 413 Pfam PF05977 Transmembrane secretion effector 10 390 7.9E-21 T 14-10-2018 IPR010290 Transmembrane secretion effector AMIS_72180 596420d4107750f314d3cc2787bbc7dd 413 SUPERFAMILY SSF103473 10 398 2.22E-37 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_72180 596420d4107750f314d3cc2787bbc7dd 413 Gene3D G3DSA:1.20.1250.20 9 393 1.2E-32 T 14-10-2018 AMIS_24240 4bfca022bd26746bd449ddc94d1ec0f8 208 SUPERFAMILY SSF46785 8 71 5.81E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_24240 4bfca022bd26746bd449ddc94d1ec0f8 208 SUPERFAMILY SSF51306 88 206 6.8E-34 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily AMIS_24240 4bfca022bd26746bd449ddc94d1ec0f8 208 Gene3D G3DSA:2.10.109.10 93 208 3.7E-39 T 14-10-2018 AMIS_24240 4bfca022bd26746bd449ddc94d1ec0f8 208 Hamap MF_00015 LexA repressor [lexA]. 7 208 30.175 T 14-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 AMIS_24240 4bfca022bd26746bd449ddc94d1ec0f8 208 Gene3D G3DSA:1.10.10.10 7 71 7.2E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_24240 4bfca022bd26746bd449ddc94d1ec0f8 208 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 135 146 3.1E-9 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AMIS_24240 4bfca022bd26746bd449ddc94d1ec0f8 208 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 124 134 3.1E-9 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AMIS_24240 4bfca022bd26746bd449ddc94d1ec0f8 208 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 163 175 3.1E-9 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AMIS_24240 4bfca022bd26746bd449ddc94d1ec0f8 208 TIGRFAM TIGR00498 lexA: repressor LexA 8 208 2.2E-59 T 14-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 AMIS_24240 4bfca022bd26746bd449ddc94d1ec0f8 208 Pfam PF01726 LexA DNA binding domain 8 63 4.3E-14 T 14-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 AMIS_24240 4bfca022bd26746bd449ddc94d1ec0f8 208 Pfam PF00717 Peptidase S24-like 127 191 4.6E-14 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AMIS_34630 2db1c2e850bf95b493cb9177068e0742 460 SUPERFAMILY SSF53067 232 454 2.7E-37 T 14-10-2018 AMIS_34630 2db1c2e850bf95b493cb9177068e0742 460 Gene3D G3DSA:3.30.420.40 1 217 4.2E-74 T 14-10-2018 AMIS_34630 2db1c2e850bf95b493cb9177068e0742 460 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 68 211 1.5E-19 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AMIS_34630 2db1c2e850bf95b493cb9177068e0742 460 SUPERFAMILY SSF53067 6 222 3.63E-40 T 14-10-2018 AMIS_34630 2db1c2e850bf95b493cb9177068e0742 460 Gene3D G3DSA:3.30.420.40 218 459 2.6E-89 T 14-10-2018 AMIS_34630 2db1c2e850bf95b493cb9177068e0742 460 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 234 418 2.2E-31 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AMIS_49140 0005246c1a715cf9503f9dcbf60d5d35 542 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 488 505 - T 14-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_49140 0005246c1a715cf9503f9dcbf60d5d35 542 PRINTS PR00662 Glucose-6-phosphate isomerase signature 148 167 1.8E-53 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_49140 0005246c1a715cf9503f9dcbf60d5d35 542 PRINTS PR00662 Glucose-6-phosphate isomerase signature 337 358 1.8E-53 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_49140 0005246c1a715cf9503f9dcbf60d5d35 542 PRINTS PR00662 Glucose-6-phosphate isomerase signature 456 474 1.8E-53 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_49140 0005246c1a715cf9503f9dcbf60d5d35 542 PRINTS PR00662 Glucose-6-phosphate isomerase signature 260 278 1.8E-53 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_49140 0005246c1a715cf9503f9dcbf60d5d35 542 PRINTS PR00662 Glucose-6-phosphate isomerase signature 488 501 1.8E-53 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_49140 0005246c1a715cf9503f9dcbf60d5d35 542 PRINTS PR00662 Glucose-6-phosphate isomerase signature 474 488 1.8E-53 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_49140 0005246c1a715cf9503f9dcbf60d5d35 542 Gene3D G3DSA:3.40.50.10490 11 497 7.6E-225 T 14-10-2018 AMIS_49140 0005246c1a715cf9503f9dcbf60d5d35 542 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 264 277 - T 14-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_49140 0005246c1a715cf9503f9dcbf60d5d35 542 Gene3D G3DSA:1.10.1390.10 498 540 1.6E-18 T 14-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_49140 0005246c1a715cf9503f9dcbf60d5d35 542 Pfam PF00342 Phosphoglucose isomerase 50 533 1.2E-215 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_49140 0005246c1a715cf9503f9dcbf60d5d35 542 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 44 515 40.706 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_49140 0005246c1a715cf9503f9dcbf60d5d35 542 Gene3D G3DSA:3.40.50.10490 96 290 7.6E-225 T 14-10-2018 AMIS_49140 0005246c1a715cf9503f9dcbf60d5d35 542 SUPERFAMILY SSF53697 6 540 1.06E-207 T 14-10-2018 AMIS_70080 196ea311c92fcce2cdd68eea52b875bb 301 Gene3D G3DSA:1.10.287.610 100 152 2.4E-17 T 14-10-2018 AMIS_70080 196ea311c92fcce2cdd68eea52b875bb 301 SUPERFAMILY SSF52313 6 226 1.03E-89 T 14-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily AMIS_70080 196ea311c92fcce2cdd68eea52b875bb 301 PRINTS PR00395 Ribosomal protein S2 signature 176 187 4.0E-39 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_70080 196ea311c92fcce2cdd68eea52b875bb 301 PRINTS PR00395 Ribosomal protein S2 signature 37 46 4.0E-39 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_70080 196ea311c92fcce2cdd68eea52b875bb 301 PRINTS PR00395 Ribosomal protein S2 signature 6 24 4.0E-39 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_70080 196ea311c92fcce2cdd68eea52b875bb 301 PRINTS PR00395 Ribosomal protein S2 signature 197 211 4.0E-39 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_70080 196ea311c92fcce2cdd68eea52b875bb 301 PRINTS PR00395 Ribosomal protein S2 signature 87 104 4.0E-39 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_70080 196ea311c92fcce2cdd68eea52b875bb 301 PRINTS PR00395 Ribosomal protein S2 signature 159 176 4.0E-39 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_70080 196ea311c92fcce2cdd68eea52b875bb 301 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 232 41.535 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_70080 196ea311c92fcce2cdd68eea52b875bb 301 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 AMIS_70080 196ea311c92fcce2cdd68eea52b875bb 301 Pfam PF00318 Ribosomal protein S2 9 225 3.3E-95 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_70080 196ea311c92fcce2cdd68eea52b875bb 301 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 225 8.9E-105 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_34750 61937b3b272e79c26bca64f74bd290b1 108 SUPERFAMILY SSF109635 3 79 1.28E-6 T 14-10-2018 IPR037187 DksA, N-terminal domain superfamily AMIS_34750 61937b3b272e79c26bca64f74bd290b1 108 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 78 108 1.1E-11 T 14-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AMIS_34750 61937b3b272e79c26bca64f74bd290b1 108 SUPERFAMILY SSF57716 80 108 2.85E-7 T 14-10-2018 AMIS_34750 61937b3b272e79c26bca64f74bd290b1 108 Gene3D G3DSA:1.20.120.910 1 108 3.6E-27 T 14-10-2018 AMIS_34750 61937b3b272e79c26bca64f74bd290b1 108 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 83 107 - T 14-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site AMIS_8700 92982adb13246958258b7ed4852145de 482 SUPERFAMILY SSF51735 240 402 5.78E-79 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_8700 92982adb13246958258b7ed4852145de 482 SMART SM00997 240 402 2.4E-112 T 14-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AMIS_8700 92982adb13246958258b7ed4852145de 482 SUPERFAMILY SSF52283 7 482 3.0E-116 T 14-10-2018 AMIS_8700 92982adb13246958258b7ed4852145de 482 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 262 278 - T 14-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AMIS_8700 92982adb13246958258b7ed4852145de 482 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 8 481 6.1E-150 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AMIS_8700 92982adb13246958258b7ed4852145de 482 PIRSF PIRSF001109 3 482 2.2E-194 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AMIS_8700 92982adb13246958258b7ed4852145de 482 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 4 474 49.318 T 14-10-2018 IPR034373 Adenosylhomocysteinase GO:0004013|GO:0019510|GO:0051287 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-2408508|Reactome: R-HSA-5578997 AMIS_8700 92982adb13246958258b7ed4852145de 482 Gene3D G3DSA:3.40.50.720 243 403 6.1E-244 T 14-10-2018 AMIS_8700 92982adb13246958258b7ed4852145de 482 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 80 94 - T 14-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AMIS_8700 92982adb13246958258b7ed4852145de 482 Gene3D G3DSA:3.40.50.1480 11 482 6.1E-244 T 14-10-2018 AMIS_8700 92982adb13246958258b7ed4852145de 482 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 240 402 1.1E-82 T 14-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AMIS_8700 92982adb13246958258b7ed4852145de 482 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 9 474 6.4E-195 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AMIS_8700 92982adb13246958258b7ed4852145de 482 SMART SM00996 8 481 0.0 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AMIS_37390 104c9803fa3157f896956fe0a34118d7 317 SUPERFAMILY SSF55469 5 76 9.57E-7 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AMIS_37390 104c9803fa3157f896956fe0a34118d7 317 Pfam PF00881 Nitroreductase family 114 299 1.6E-6 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AMIS_37390 104c9803fa3157f896956fe0a34118d7 317 SUPERFAMILY SSF55469 112 314 1.9E-8 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AMIS_37390 104c9803fa3157f896956fe0a34118d7 317 Gene3D G3DSA:3.40.109.10 1 99 1.4E-29 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AMIS_37390 104c9803fa3157f896956fe0a34118d7 317 Gene3D G3DSA:3.40.109.10 104 317 2.8E-51 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AMIS_65770 d1dac6a9df42b1558892db9d99a159a3 335 Gene3D G3DSA:3.40.50.2000 9 333 4.2E-78 T 14-10-2018 AMIS_65770 d1dac6a9df42b1558892db9d99a159a3 335 Pfam PF13439 Glycosyltransferase Family 4 24 142 2.7E-8 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AMIS_65770 d1dac6a9df42b1558892db9d99a159a3 335 Pfam PF00534 Glycosyl transferases group 1 165 305 7.3E-22 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 AMIS_65770 d1dac6a9df42b1558892db9d99a159a3 335 Gene3D G3DSA:3.40.50.2000 154 327 4.2E-78 T 14-10-2018 AMIS_65770 d1dac6a9df42b1558892db9d99a159a3 335 SUPERFAMILY SSF53756 5 334 1.14E-53 T 14-10-2018 AMIS_36800 f2e207f49ca57deb4e820fb33fe1cba5 314 Gene3D G3DSA:3.10.180.10 5 125 3.0E-41 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_36800 f2e207f49ca57deb4e820fb33fe1cba5 314 Gene3D G3DSA:3.10.180.10 138 292 5.8E-39 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_36800 f2e207f49ca57deb4e820fb33fe1cba5 314 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 143 258 7.9E-14 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMIS_36800 f2e207f49ca57deb4e820fb33fe1cba5 314 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 11 122 3.4E-7 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMIS_36800 f2e207f49ca57deb4e820fb33fe1cba5 314 SUPERFAMILY SSF54593 8 292 1.33E-38 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_54560 f86c20e3259b58a93a68467d9bdafe14 585 Pfam PF16657 Maltogenic Amylase, C-terminal domain 498 575 3.2E-26 T 14-10-2018 IPR032091 Maltogenic Amylase, C-terminal AMIS_54560 f86c20e3259b58a93a68467d9bdafe14 585 Pfam PF00128 Alpha amylase, catalytic domain 63 419 1.2E-76 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMIS_54560 f86c20e3259b58a93a68467d9bdafe14 585 TIGRFAM TIGR02456 treS_nterm: trehalose synthase 40 578 2.5E-287 T 14-10-2018 IPR012810 Trehalose synthase/alpha-amylase, N-terminal GO:0003824|GO:0005975 KEGG: 00500+5.4.99.16|MetaCyc: PWY-2622|MetaCyc: PWY-7900 AMIS_54560 f86c20e3259b58a93a68467d9bdafe14 585 Gene3D G3DSA:3.90.400.10 138 207 3.0E-226 T 14-10-2018 AMIS_54560 f86c20e3259b58a93a68467d9bdafe14 585 Gene3D G3DSA:2.60.40.1180 498 585 6.0E-36 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta AMIS_54560 f86c20e3259b58a93a68467d9bdafe14 585 SUPERFAMILY SSF51445 51 498 3.84E-132 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_54560 f86c20e3259b58a93a68467d9bdafe14 585 Gene3D G3DSA:3.20.20.80 39 492 3.0E-226 T 14-10-2018 AMIS_54560 f86c20e3259b58a93a68467d9bdafe14 585 SMART SM00642 48 450 4.5E-114 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMIS_54560 f86c20e3259b58a93a68467d9bdafe14 585 SUPERFAMILY SSF51011 503 578 2.59E-17 T 14-10-2018 AMIS_79180 1a16c461963d6e16e7f3f1eb7d9bc600 1103 Pfam PF13569 Domain of unknown function (DUF4132) 834 1015 9.3E-54 T 14-10-2018 IPR025406 Domain of unknown function DUF4132 AMIS_22220 b2313a6cda0a012be56da7149ab83615 140 Gene3D G3DSA:3.40.33.10 3 139 8.0E-49 T 14-10-2018 IPR035940 CAP superfamily AMIS_22220 b2313a6cda0a012be56da7149ab83615 140 Pfam PF00188 Cysteine-rich secretory protein family 25 138 9.1E-24 T 14-10-2018 IPR014044 CAP domain AMIS_22220 b2313a6cda0a012be56da7149ab83615 140 SUPERFAMILY SSF55797 17 139 1.7E-27 T 14-10-2018 IPR035940 CAP superfamily AMIS_48740 4c75e0af26d5ebdc0b45b5a18da511bb 239 Pfam PF00072 Response regulator receiver domain 13 122 9.9E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_48740 4c75e0af26d5ebdc0b45b5a18da511bb 239 SUPERFAMILY SSF46894 136 234 2.69E-29 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_48740 4c75e0af26d5ebdc0b45b5a18da511bb 239 Gene3D G3DSA:1.10.10.10 137 239 5.2E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_48740 4c75e0af26d5ebdc0b45b5a18da511bb 239 SUPERFAMILY SSF52172 8 133 2.42E-41 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_48740 4c75e0af26d5ebdc0b45b5a18da511bb 239 SMART SM00862 159 233 2.6E-28 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_48740 4c75e0af26d5ebdc0b45b5a18da511bb 239 Gene3D G3DSA:3.40.50.2300 4 131 4.0E-37 T 14-10-2018 AMIS_48740 4c75e0af26d5ebdc0b45b5a18da511bb 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 161 233 3.0E-26 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_48740 4c75e0af26d5ebdc0b45b5a18da511bb 239 SMART SM00448 11 122 1.5E-40 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_8790 ab1cee350b8904b8b55f823bb66d173c 968 Gene3D G3DSA:3.10.450.50 927 964 5.4E-6 T 14-10-2018 AMIS_8790 ab1cee350b8904b8b55f823bb66d173c 968 Gene3D G3DSA:3.40.50.300 20 400 1.9E-170 T 14-10-2018 AMIS_8790 ab1cee350b8904b8b55f823bb66d173c 968 ProSitePatterns PS01312 SecA family signature. 485 500 - T 14-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 AMIS_8790 ab1cee350b8904b8b55f823bb66d173c 968 SUPERFAMILY SSF81886 620 954 7.19E-74 T 14-10-2018 IPR036266 SecA, Wing/Scaffold superfamily AMIS_8790 ab1cee350b8904b8b55f823bb66d173c 968 Gene3D G3DSA:3.90.1440.10 227 353 1.9E-170 T 14-10-2018 AMIS_8790 ab1cee350b8904b8b55f823bb66d173c 968 Gene3D G3DSA:1.10.3060.10 621 836 2.2E-72 T 14-10-2018 AMIS_8790 ab1cee350b8904b8b55f823bb66d173c 968 SUPERFAMILY SSF81767 225 353 1.57E-38 T 14-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 AMIS_8790 ab1cee350b8904b8b55f823bb66d173c 968 PRINTS PR00906 SecA protein signature 61 85 8.9E-70 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMIS_8790 ab1cee350b8904b8b55f823bb66d173c 968 PRINTS PR00906 SecA protein signature 168 188 8.9E-70 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMIS_8790 ab1cee350b8904b8b55f823bb66d173c 968 PRINTS PR00906 SecA protein signature 361 378 8.9E-70 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMIS_8790 ab1cee350b8904b8b55f823bb66d173c 968 PRINTS PR00906 SecA protein signature 324 346 8.9E-70 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMIS_8790 ab1cee350b8904b8b55f823bb66d173c 968 PRINTS PR00906 SecA protein signature 99 113 8.9E-70 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMIS_8790 ab1cee350b8904b8b55f823bb66d173c 968 PRINTS PR00906 SecA protein signature 398 411 8.9E-70 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMIS_8790 ab1cee350b8904b8b55f823bb66d173c 968 PRINTS PR00906 SecA protein signature 115 125 8.9E-70 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMIS_8790 ab1cee350b8904b8b55f823bb66d173c 968 SMART SM00958 226 343 1.2E-59 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 AMIS_8790 ab1cee350b8904b8b55f823bb66d173c 968 SUPERFAMILY SSF52540 401 618 5.32E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_8790 ab1cee350b8904b8b55f823bb66d173c 968 Gene3D G3DSA:3.40.50.300 402 619 1.2E-91 T 14-10-2018 AMIS_8790 ab1cee350b8904b8b55f823bb66d173c 968 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 26 821 0.0 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMIS_8790 ab1cee350b8904b8b55f823bb66d173c 968 Pfam PF02810 SEC-C motif 946 963 2.7E-8 T 14-10-2018 IPR004027 SEC-C motif AMIS_8790 ab1cee350b8904b8b55f823bb66d173c 968 Pfam PF07516 SecA Wing and Scaffold domain 617 832 1.3E-64 T 14-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 AMIS_8790 ab1cee350b8904b8b55f823bb66d173c 968 SMART SM00957 4 387 5.5E-271 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 AMIS_8790 ab1cee350b8904b8b55f823bb66d173c 968 Pfam PF01043 SecA preprotein cross-linking domain 231 343 5.5E-33 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 AMIS_8790 ab1cee350b8904b8b55f823bb66d173c 968 SUPERFAMILY SSF52540 3 400 4.12E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_8790 ab1cee350b8904b8b55f823bb66d173c 968 Hamap MF_01382 Protein translocase subunit SecA [secA]. 3 835 19.768 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMIS_8790 ab1cee350b8904b8b55f823bb66d173c 968 Pfam PF07517 SecA DEAD-like domain 5 387 1.9E-126 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 AMIS_15090 e5a621b3e65be48138875a20f6c223b6 348 PIRSF PIRSF002849 7 326 6.7E-126 T 14-10-2018 AMIS_15090 e5a621b3e65be48138875a20f6c223b6 348 Gene3D G3DSA:3.40.50.300 33 198 1.8E-44 T 14-10-2018 AMIS_15090 e5a621b3e65be48138875a20f6c223b6 348 SUPERFAMILY SSF52540 33 296 1.38E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_15090 e5a621b3e65be48138875a20f6c223b6 348 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 52 181 4.2E-64 T 14-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 AMIS_15090 e5a621b3e65be48138875a20f6c223b6 348 Gene3D G3DSA:1.10.8.300 213 321 9.0E-30 T 14-10-2018 AMIS_51220 f31d9e247df811e4de20a7aea297101f 962 SUPERFAMILY SSF48208 330 960 2.11E-279 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AMIS_51220 f31d9e247df811e4de20a7aea297101f 962 SUPERFAMILY SSF49384 23 128 1.4E-26 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 AMIS_51220 f31d9e247df811e4de20a7aea297101f 962 Gene3D G3DSA:2.60.40.290 21 131 4.3E-32 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 AMIS_51220 f31d9e247df811e4de20a7aea297101f 962 Pfam PF02011 Glycosyl hydrolase family 48 335 959 0.0 T 14-10-2018 IPR000556 Glycoside hydrolase, 48F GO:0004553|GO:0008810|GO:0030245 AMIS_51220 f31d9e247df811e4de20a7aea297101f 962 Gene3D G3DSA:4.10.870.10 871 942 6.1E-299 T 14-10-2018 IPR027390 Endoglucanase F, domain 3 AMIS_51220 f31d9e247df811e4de20a7aea297101f 962 SMART SM00637 27 128 7.1E-39 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 AMIS_51220 f31d9e247df811e4de20a7aea297101f 962 Gene3D G3DSA:1.50.10.10 335 959 6.1E-299 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 AMIS_51220 f31d9e247df811e4de20a7aea297101f 962 Gene3D G3DSA:2.60.40.10 136 233 8.3E-21 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_51220 f31d9e247df811e4de20a7aea297101f 962 Pfam PF00553 Cellulose binding domain 27 128 8.4E-26 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 AMIS_51220 f31d9e247df811e4de20a7aea297101f 962 Gene3D G3DSA:2.170.160.10 417 645 6.1E-299 T 14-10-2018 IPR023309 Endoglucanase F, domain 2 AMIS_51220 f31d9e247df811e4de20a7aea297101f 962 PRINTS PR00844 Glycosyl hydrolase family 48 signature 892 920 4.8E-103 T 14-10-2018 IPR000556 Glycoside hydrolase, 48F GO:0004553|GO:0008810|GO:0030245 AMIS_51220 f31d9e247df811e4de20a7aea297101f 962 PRINTS PR00844 Glycosyl hydrolase family 48 signature 783 803 4.8E-103 T 14-10-2018 IPR000556 Glycoside hydrolase, 48F GO:0004553|GO:0008810|GO:0030245 AMIS_51220 f31d9e247df811e4de20a7aea297101f 962 PRINTS PR00844 Glycosyl hydrolase family 48 signature 356 381 4.8E-103 T 14-10-2018 IPR000556 Glycoside hydrolase, 48F GO:0004553|GO:0008810|GO:0030245 AMIS_51220 f31d9e247df811e4de20a7aea297101f 962 PRINTS PR00844 Glycosyl hydrolase family 48 signature 382 399 4.8E-103 T 14-10-2018 IPR000556 Glycoside hydrolase, 48F GO:0004553|GO:0008810|GO:0030245 AMIS_51220 f31d9e247df811e4de20a7aea297101f 962 PRINTS PR00844 Glycosyl hydrolase family 48 signature 613 632 4.8E-103 T 14-10-2018 IPR000556 Glycoside hydrolase, 48F GO:0004553|GO:0008810|GO:0030245 AMIS_51220 f31d9e247df811e4de20a7aea297101f 962 PRINTS PR00844 Glycosyl hydrolase family 48 signature 497 521 4.8E-103 T 14-10-2018 IPR000556 Glycoside hydrolase, 48F GO:0004553|GO:0008810|GO:0030245 AMIS_51220 f31d9e247df811e4de20a7aea297101f 962 PRINTS PR00844 Glycosyl hydrolase family 48 signature 683 706 4.8E-103 T 14-10-2018 IPR000556 Glycoside hydrolase, 48F GO:0004553|GO:0008810|GO:0030245 AMIS_51220 f31d9e247df811e4de20a7aea297101f 962 PRINTS PR00844 Glycosyl hydrolase family 48 signature 729 755 4.8E-103 T 14-10-2018 IPR000556 Glycoside hydrolase, 48F GO:0004553|GO:0008810|GO:0030245 AMIS_51220 f31d9e247df811e4de20a7aea297101f 962 PRINTS PR00844 Glycosyl hydrolase family 48 signature 542 569 4.8E-103 T 14-10-2018 IPR000556 Glycoside hydrolase, 48F GO:0004553|GO:0008810|GO:0030245 AMIS_39350 68e468710d39d8558b218fa82a2c03bd 333 Pfam PF03022 Major royal jelly protein 72 331 2.7E-29 T 14-10-2018 IPR017996 Major royal jelly protein/protein yellow AMIS_39350 68e468710d39d8558b218fa82a2c03bd 333 Gene3D G3DSA:2.120.10.30 8 333 1.6E-108 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AMIS_39350 68e468710d39d8558b218fa82a2c03bd 333 SUPERFAMILY SSF63829 22 309 7.19E-28 T 14-10-2018 AMIS_42340 4ed4a2d2102400f375d1051b5686bf06 226 Gene3D G3DSA:3.40.50.1820 6 223 4.8E-23 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_42340 4ed4a2d2102400f375d1051b5686bf06 226 SUPERFAMILY SSF53474 10 200 1.02E-21 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_42340 4ed4a2d2102400f375d1051b5686bf06 226 Pfam PF12697 Alpha/beta hydrolase family 32 209 2.3E-12 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_52600 3c254444f3fd27189d4490a9a21fe1a6 541 Gene3D G3DSA:3.20.20.360 2 401 9.6E-179 T 14-10-2018 AMIS_52600 3c254444f3fd27189d4490a9a21fe1a6 541 Gene3D G3DSA:1.20.1220.12 404 523 3.1E-35 T 14-10-2018 AMIS_52600 3c254444f3fd27189d4490a9a21fe1a6 541 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 19 521 9.9E-221 T 14-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AMIS_52600 3c254444f3fd27189d4490a9a21fe1a6 541 ProSitePatterns PS00510 Malate synthase signature. 260 275 - T 14-10-2018 IPR019830 Malate synthase, conserved site GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AMIS_52600 3c254444f3fd27189d4490a9a21fe1a6 541 Pfam PF01274 Malate synthase 8 521 5.3E-177 T 14-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AMIS_52600 3c254444f3fd27189d4490a9a21fe1a6 541 PIRSF PIRSF001363 2 525 1.4E-222 T 14-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AMIS_52600 3c254444f3fd27189d4490a9a21fe1a6 541 SUPERFAMILY SSF51645 6 524 5.89E-170 T 14-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AMIS_60830 806312d330c4f7b2cb873e8f5a326f87 286 Gene3D G3DSA:1.10.443.10 96 279 1.4E-56 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AMIS_60830 806312d330c4f7b2cb873e8f5a326f87 286 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 1 285 51.39 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD AMIS_60830 806312d330c4f7b2cb873e8f5a326f87 286 Pfam PF00589 Phage integrase family 97 269 6.8E-40 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMIS_60830 806312d330c4f7b2cb873e8f5a326f87 286 SUPERFAMILY SSF56349 3 277 1.94E-52 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMIS_60830 806312d330c4f7b2cb873e8f5a326f87 286 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 2 74 1.8E-18 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AMIS_60830 806312d330c4f7b2cb873e8f5a326f87 286 Gene3D G3DSA:1.10.150.130 1 93 4.2E-16 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal AMIS_6170 e3102334672a5220184594f727ff8958 135 ProSitePatterns PS00053 Ribosomal protein S8 signature. 105 122 - T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_6170 e3102334672a5220184594f727ff8958 135 Gene3D G3DSA:3.30.1370.30 4 81 5.2E-27 T 14-10-2018 AMIS_6170 e3102334672a5220184594f727ff8958 135 SUPERFAMILY SSF56047 3 135 4.58E-44 T 14-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_6170 e3102334672a5220184594f727ff8958 135 Gene3D G3DSA:3.30.1490.10 82 135 1.2E-25 T 14-10-2018 AMIS_6170 e3102334672a5220184594f727ff8958 135 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 135 32.065 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_6170 e3102334672a5220184594f727ff8958 135 Pfam PF00410 Ribosomal protein S8 5 135 2.8E-50 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_75530 a9fd92966d82cbff59386663bfbc24d1 233 Gene3D G3DSA:3.40.50.1000 3 202 5.8E-32 T 14-10-2018 IPR023214 HAD superfamily AMIS_75530 a9fd92966d82cbff59386663bfbc24d1 233 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 110 187 8.6E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMIS_75530 a9fd92966d82cbff59386663bfbc24d1 233 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 136 152 2.1E-13 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMIS_75530 a9fd92966d82cbff59386663bfbc24d1 233 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 154 174 2.1E-13 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMIS_75530 a9fd92966d82cbff59386663bfbc24d1 233 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 2.1E-13 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMIS_75530 a9fd92966d82cbff59386663bfbc24d1 233 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 2.1E-13 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMIS_75530 a9fd92966d82cbff59386663bfbc24d1 233 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 140 189 5.4E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMIS_75530 a9fd92966d82cbff59386663bfbc24d1 233 SUPERFAMILY SSF56784 4 226 2.56E-33 T 14-10-2018 IPR036412 HAD-like superfamily AMIS_75530 a9fd92966d82cbff59386663bfbc24d1 233 Pfam PF00702 haloacid dehalogenase-like hydrolase 4 187 3.1E-14 T 14-10-2018 AMIS_35580 a50d4b12977c82828f455796b636322f 223 SUPERFAMILY SSF48371 6 220 3.45E-61 T 14-10-2018 IPR016024 Armadillo-type fold AMIS_35580 a50d4b12977c82828f455796b636322f 223 Pfam PF08713 DNA alkylation repair enzyme 9 188 5.6E-23 T 14-10-2018 IPR014825 DNA alkylation repair enzyme AMIS_53470 bd11331de6251acde764968588dc9151 299 Gene3D G3DSA:3.40.50.10330 4 132 3.6E-24 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 AMIS_53470 bd11331de6251acde764968588dc9151 299 SMART SM00046 5 134 0.0014 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 AMIS_53470 bd11331de6251acde764968588dc9151 299 Pfam PF00781 Diacylglycerol kinase catalytic domain 7 119 8.4E-22 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 AMIS_53470 bd11331de6251acde764968588dc9151 299 Gene3D G3DSA:2.60.200.40 133 292 4.2E-39 T 14-10-2018 AMIS_53470 bd11331de6251acde764968588dc9151 299 SUPERFAMILY SSF111331 6 299 3.92E-63 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily AMIS_4140 533cce712aab754c3a6acf74e1c31254 158 SUPERFAMILY SSF52172 3 123 4.7E-38 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_4140 533cce712aab754c3a6acf74e1c31254 158 Pfam PF00072 Response regulator receiver domain 4 115 6.2E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_4140 533cce712aab754c3a6acf74e1c31254 158 SMART SM00448 2 115 8.6E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_4140 533cce712aab754c3a6acf74e1c31254 158 Gene3D G3DSA:3.40.50.12740 2 157 1.6E-41 T 14-10-2018 AMIS_24460 659bf1c91d30542c4e9bdef110cc7d17 411 Gene3D G3DSA:1.20.1250.20 212 404 5.0E-16 T 14-10-2018 AMIS_24460 659bf1c91d30542c4e9bdef110cc7d17 411 Pfam PF07690 Major Facilitator Superfamily 240 394 3.0E-8 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_24460 659bf1c91d30542c4e9bdef110cc7d17 411 Pfam PF07690 Major Facilitator Superfamily 17 238 1.9E-21 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_24460 659bf1c91d30542c4e9bdef110cc7d17 411 Gene3D G3DSA:1.20.1250.20 6 211 8.7E-23 T 14-10-2018 AMIS_24460 659bf1c91d30542c4e9bdef110cc7d17 411 SUPERFAMILY SSF103473 5 395 3.14E-52 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_4710 8ddcc6f90063175cbfab5f47dabbcc27 651 Pfam PF00563 EAL domain 400 634 1.3E-74 T 14-10-2018 IPR001633 EAL domain AMIS_4710 8ddcc6f90063175cbfab5f47dabbcc27 651 Gene3D G3DSA:3.20.20.450 397 645 8.4E-96 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_4710 8ddcc6f90063175cbfab5f47dabbcc27 651 SUPERFAMILY SSF141868 401 641 1.83E-86 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_4710 8ddcc6f90063175cbfab5f47dabbcc27 651 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 226 382 1.9E-33 T 14-10-2018 IPR000160 GGDEF domain AMIS_4710 8ddcc6f90063175cbfab5f47dabbcc27 651 SMART SM00267 218 384 2.9E-49 T 14-10-2018 IPR000160 GGDEF domain AMIS_4710 8ddcc6f90063175cbfab5f47dabbcc27 651 Gene3D G3DSA:3.30.70.270 224 388 5.3E-48 T 14-10-2018 AMIS_4710 8ddcc6f90063175cbfab5f47dabbcc27 651 Pfam PF00990 Diguanylate cyclase, GGDEF domain 229 377 1.4E-36 T 14-10-2018 IPR000160 GGDEF domain AMIS_4710 8ddcc6f90063175cbfab5f47dabbcc27 651 SMART SM00052 394 639 4.2E-107 T 14-10-2018 IPR001633 EAL domain AMIS_4710 8ddcc6f90063175cbfab5f47dabbcc27 651 SUPERFAMILY SSF55073 234 384 3.3E-42 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_3910 4ac79c920d8a8462e09fbbdc088e5b8c 428 Pfam PF05977 Transmembrane secretion effector 18 403 1.4E-38 T 14-10-2018 IPR010290 Transmembrane secretion effector AMIS_3910 4ac79c920d8a8462e09fbbdc088e5b8c 428 SUPERFAMILY SSF103473 24 413 4.19E-44 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_3910 4ac79c920d8a8462e09fbbdc088e5b8c 428 Gene3D G3DSA:1.20.1250.20 23 412 2.7E-35 T 14-10-2018 AMIS_57060 f21ecdd2c289ca036db2da88d4323707 371 Pfam PF02803 Thiolase, C-terminal domain 245 358 1.8E-6 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 AMIS_57060 f21ecdd2c289ca036db2da88d4323707 371 PIRSF PIRSF000429 1 365 4.8E-23 T 14-10-2018 IPR002155 Thiolase GO:0016747 AMIS_57060 f21ecdd2c289ca036db2da88d4323707 371 SUPERFAMILY SSF53901 21 306 1.29E-20 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_57060 f21ecdd2c289ca036db2da88d4323707 371 Gene3D G3DSA:3.40.47.10 2 369 1.6E-96 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_57060 f21ecdd2c289ca036db2da88d4323707 371 SUPERFAMILY SSF53901 229 359 3.19E-23 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_17490 f6d39464865a69c294f18243c28e087d 475 SMART SM00388 254 322 2.4E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_17490 f6d39464865a69c294f18243c28e087d 475 Gene3D G3DSA:1.10.287.130 242 324 9.7E-16 T 14-10-2018 AMIS_17490 f6d39464865a69c294f18243c28e087d 475 Gene3D G3DSA:1.20.120.620 27 133 6.3E-14 T 14-10-2018 IPR038318 KdpD, transmembrane domain superfamily AMIS_17490 f6d39464865a69c294f18243c28e087d 475 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 365 472 1.1E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_17490 f6d39464865a69c294f18243c28e087d 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 458 471 9.5E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_17490 f6d39464865a69c294f18243c28e087d 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 415 9.5E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_17490 f6d39464865a69c294f18243c28e087d 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 452 9.5E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_17490 f6d39464865a69c294f18243c28e087d 475 SUPERFAMILY SSF55874 312 472 6.55E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_17490 f6d39464865a69c294f18243c28e087d 475 Pfam PF00512 His Kinase A (phospho-acceptor) domain 255 322 1.2E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_17490 f6d39464865a69c294f18243c28e087d 475 Gene3D G3DSA:3.30.565.10 329 474 1.9E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_17490 f6d39464865a69c294f18243c28e087d 475 Pfam PF13493 Domain of unknown function (DUF4118) 33 136 2.8E-24 T 14-10-2018 IPR025201 Sensor protein KdpD, transmembrane domain AMIS_17490 f6d39464865a69c294f18243c28e087d 475 SMART SM00387 364 474 7.4E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_17490 f6d39464865a69c294f18243c28e087d 475 SUPERFAMILY SSF47384 245 322 1.24E-15 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_71080 725e9965aa1876defc0596c2776b4a2b 153 Pfam PF00472 RF-1 domain 23 148 2.0E-21 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AMIS_71080 725e9965aa1876defc0596c2776b4a2b 153 SUPERFAMILY SSF75620 21 116 8.24E-11 T 14-10-2018 AMIS_71080 725e9965aa1876defc0596c2776b4a2b 153 Gene3D G3DSA:3.30.160.20 16 151 5.8E-32 T 14-10-2018 AMIS_75750 ba5ca88346c182d1ce11ffaedde8d1b7 871 Gene3D G3DSA:3.30.70.1230 3 191 3.2E-42 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_75750 ba5ca88346c182d1ce11ffaedde8d1b7 871 SMART SM00044 6 154 3.1E-4 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMIS_75750 ba5ca88346c182d1ce11ffaedde8d1b7 871 SUPERFAMILY SSF52540 203 453 3.72E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_75750 ba5ca88346c182d1ce11ffaedde8d1b7 871 SUPERFAMILY SSF55073 8 197 8.48E-38 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_75750 ba5ca88346c182d1ce11ffaedde8d1b7 871 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 11 145 1.3E-8 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMIS_75750 ba5ca88346c182d1ce11ffaedde8d1b7 871 Gene3D G3DSA:3.40.50.300 202 343 1.7E-11 T 14-10-2018 AMIS_31750 22b9ba060d6456e51937f2093fd82049 720 Gene3D G3DSA:3.30.450.40 311 485 5.6E-15 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_31750 22b9ba060d6456e51937f2093fd82049 720 Pfam PF05231 MASE1 30 303 8.1E-26 T 14-10-2018 IPR007895 MASE1 AMIS_31750 22b9ba060d6456e51937f2093fd82049 720 SMART SM00065 335 481 0.004 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_31750 22b9ba060d6456e51937f2093fd82049 720 Pfam PF13185 GAF domain 335 471 1.4E-8 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_31750 22b9ba060d6456e51937f2093fd82049 720 SMART SM00331 500 713 3.5E-29 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_31750 22b9ba060d6456e51937f2093fd82049 720 SUPERFAMILY SSF81606 516 713 4.97E-6 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_31750 22b9ba060d6456e51937f2093fd82049 720 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 529 713 5.9E-37 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_31750 22b9ba060d6456e51937f2093fd82049 720 SUPERFAMILY SSF55781 343 480 1.16E-12 T 14-10-2018 AMIS_31750 22b9ba060d6456e51937f2093fd82049 720 Gene3D G3DSA:3.60.40.10 498 712 1.3E-50 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_33420 bafc8d9a5a391f6309af8595fefa5e7a 780 SUPERFAMILY SSF49265 288 478 3.64E-17 T 14-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 AMIS_33420 bafc8d9a5a391f6309af8595fefa5e7a 780 Gene3D G3DSA:2.60.40.10 383 491 3.4E-7 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_33420 bafc8d9a5a391f6309af8595fefa5e7a 780 SMART SM00060 385 466 0.018 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 AMIS_33420 bafc8d9a5a391f6309af8595fefa5e7a 780 SMART SM00060 290 369 5.4E-10 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 AMIS_33420 bafc8d9a5a391f6309af8595fefa5e7a 780 SMART SM00060 555 629 1.7E-7 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 AMIS_33420 bafc8d9a5a391f6309af8595fefa5e7a 780 Gene3D G3DSA:2.120.10.30 42 299 1.3E-28 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AMIS_33420 bafc8d9a5a391f6309af8595fefa5e7a 780 PRINTS PR01217 Proline rich extensin signature 478 494 2.7E-11 T 14-10-2018 AMIS_33420 bafc8d9a5a391f6309af8595fefa5e7a 780 PRINTS PR01217 Proline rich extensin signature 504 516 2.7E-11 T 14-10-2018 AMIS_33420 bafc8d9a5a391f6309af8595fefa5e7a 780 PRINTS PR01217 Proline rich extensin signature 519 540 2.7E-11 T 14-10-2018 AMIS_33420 bafc8d9a5a391f6309af8595fefa5e7a 780 PRINTS PR01217 Proline rich extensin signature 541 557 2.7E-11 T 14-10-2018 AMIS_33420 bafc8d9a5a391f6309af8595fefa5e7a 780 PRINTS PR01217 Proline rich extensin signature 624 649 2.7E-11 T 14-10-2018 AMIS_33420 bafc8d9a5a391f6309af8595fefa5e7a 780 Pfam PF00041 Fibronectin type III domain 291 366 4.8E-9 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 AMIS_33420 bafc8d9a5a391f6309af8595fefa5e7a 780 Gene3D G3DSA:2.60.40.10 540 651 1.1E-11 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_33420 bafc8d9a5a391f6309af8595fefa5e7a 780 Gene3D G3DSA:2.60.40.10 300 380 2.9E-14 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_33420 bafc8d9a5a391f6309af8595fefa5e7a 780 SUPERFAMILY SSF63825 69 270 2.33E-19 T 14-10-2018 AMIS_33420 bafc8d9a5a391f6309af8595fefa5e7a 780 SUPERFAMILY SSF49265 546 649 2.46E-14 T 14-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 AMIS_17700 ed02f96793b66a7542af5ff2839b0843 704 Gene3D G3DSA:3.30.450.20 317 447 1.3E-14 T 14-10-2018 AMIS_17700 ed02f96793b66a7542af5ff2839b0843 704 PRINTS PR00344 Bacterial sensor protein C-terminal signature 668 681 4.1E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_17700 ed02f96793b66a7542af5ff2839b0843 704 PRINTS PR00344 Bacterial sensor protein C-terminal signature 611 625 4.1E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_17700 ed02f96793b66a7542af5ff2839b0843 704 PRINTS PR00344 Bacterial sensor protein C-terminal signature 644 662 4.1E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_17700 ed02f96793b66a7542af5ff2839b0843 704 SUPERFAMILY SSF55874 525 682 3.41E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_17700 ed02f96793b66a7542af5ff2839b0843 704 Pfam PF00512 His Kinase A (phospho-acceptor) domain 457 524 1.9E-6 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_17700 ed02f96793b66a7542af5ff2839b0843 704 SUPERFAMILY SSF47384 441 523 6.87E-9 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_17700 ed02f96793b66a7542af5ff2839b0843 704 Gene3D G3DSA:3.30.565.10 531 684 4.6E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_17700 ed02f96793b66a7542af5ff2839b0843 704 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 328 365 7.7E-6 T 14-10-2018 IPR000014 PAS domain AMIS_17700 ed02f96793b66a7542af5ff2839b0843 704 Pfam PF13188 PAS domain 331 379 3.4E-7 T 14-10-2018 IPR000014 PAS domain AMIS_17700 ed02f96793b66a7542af5ff2839b0843 704 Pfam PF05231 MASE1 13 300 2.7E-11 T 14-10-2018 IPR007895 MASE1 AMIS_17700 ed02f96793b66a7542af5ff2839b0843 704 Gene3D G3DSA:1.10.287.130 448 527 1.0E-6 T 14-10-2018 AMIS_17700 ed02f96793b66a7542af5ff2839b0843 704 SMART SM00388 456 528 4.2E-5 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_17700 ed02f96793b66a7542af5ff2839b0843 704 SMART SM00091 331 399 5.3E-4 T 14-10-2018 IPR000014 PAS domain AMIS_17700 ed02f96793b66a7542af5ff2839b0843 704 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 573 682 9.4E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_17700 ed02f96793b66a7542af5ff2839b0843 704 SUPERFAMILY SSF55785 318 448 1.22E-10 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_17700 ed02f96793b66a7542af5ff2839b0843 704 SMART SM00387 572 684 2.5E-36 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_23230 794d92fc255dacf5ffde6477a5f37e35 206 Gene3D G3DSA:3.40.50.720 1 194 2.3E-46 T 14-10-2018 AMIS_23230 794d92fc255dacf5ffde6477a5f37e35 206 SUPERFAMILY SSF51735 3 191 1.92E-29 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_23230 794d92fc255dacf5ffde6477a5f37e35 206 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 3 92 4.7E-16 T 14-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal AMIS_59880 f31f746e4d9d1fedd56066d11d624a91 283 SUPERFAMILY SSF161098 13 283 1.83E-57 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_59880 f31f746e4d9d1fedd56066d11d624a91 283 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 274 3.4E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_59880 f31f746e4d9d1fedd56066d11d624a91 283 Gene3D G3DSA:1.10.3720.10 12 270 1.4E-54 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_77450 000f692a1629095fe936e6c28734aea5 417 ProSitePatterns PS01125 ROK family signature. 242 269 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AMIS_77450 000f692a1629095fe936e6c28734aea5 417 Gene3D G3DSA:3.30.420.40 234 391 1.2E-37 T 14-10-2018 AMIS_77450 000f692a1629095fe936e6c28734aea5 417 SUPERFAMILY SSF53067 237 413 8.91E-31 T 14-10-2018 AMIS_77450 000f692a1629095fe936e6c28734aea5 417 SUPERFAMILY SSF53067 72 161 6.68E-7 T 14-10-2018 AMIS_77450 000f692a1629095fe936e6c28734aea5 417 Gene3D G3DSA:3.30.420.40 213 404 1.2E-37 T 14-10-2018 AMIS_77450 000f692a1629095fe936e6c28734aea5 417 Gene3D G3DSA:3.30.420.40 73 173 3.1E-6 T 14-10-2018 AMIS_77450 000f692a1629095fe936e6c28734aea5 417 Gene3D G3DSA:1.10.10.10 3 66 7.6E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_77450 000f692a1629095fe936e6c28734aea5 417 Pfam PF00480 ROK family 213 405 2.2E-31 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AMIS_77450 000f692a1629095fe936e6c28734aea5 417 SUPERFAMILY SSF46785 8 65 6.01E-6 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_80380 67cc66cbe63347784d4ec1b51aa314ef 111 Gene3D G3DSA:3.40.250.10 11 109 2.8E-29 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily AMIS_80380 67cc66cbe63347784d4ec1b51aa314ef 111 SUPERFAMILY SSF52821 5 105 1.2E-31 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily AMIS_80380 67cc66cbe63347784d4ec1b51aa314ef 111 SMART SM00450 4 99 2.1E-18 T 14-10-2018 IPR001763 Rhodanese-like domain AMIS_80380 67cc66cbe63347784d4ec1b51aa314ef 111 Pfam PF00581 Rhodanese-like domain 18 95 8.7E-15 T 14-10-2018 IPR001763 Rhodanese-like domain AMIS_72980 2c6d50ff8640fd654e9f2182c388e09a 344 Pfam PF01380 SIS domain 204 325 8.6E-12 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AMIS_72980 2c6d50ff8640fd654e9f2182c388e09a 344 Pfam PF01380 SIS domain 36 161 1.3E-18 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AMIS_72980 2c6d50ff8640fd654e9f2182c388e09a 344 SUPERFAMILY SSF53697 4 342 2.86E-73 T 14-10-2018 AMIS_72980 2c6d50ff8640fd654e9f2182c388e09a 344 Gene3D G3DSA:3.40.50.10490 190 343 1.3E-35 T 14-10-2018 AMIS_72980 2c6d50ff8640fd654e9f2182c388e09a 344 Gene3D G3DSA:3.40.50.10490 1 175 4.0E-47 T 14-10-2018 AMIS_43670 3d0c7e62c6172e19596d013b81afff28 223 SUPERFAMILY SSF53335 5 195 2.09E-29 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_43670 3d0c7e62c6172e19596d013b81afff28 223 Pfam PF13489 Methyltransferase domain 34 139 2.2E-16 T 14-10-2018 AMIS_43670 3d0c7e62c6172e19596d013b81afff28 223 Gene3D G3DSA:3.40.50.150 11 212 2.4E-28 T 14-10-2018 AMIS_59530 329b64a273c4a98eb63e4da2193940ad 373 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 301 317 4.7 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_59530 329b64a273c4a98eb63e4da2193940ad 373 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 204 220 0.036 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_59530 329b64a273c4a98eb63e4da2193940ad 373 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 319 335 0.03 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_59530 329b64a273c4a98eb63e4da2193940ad 373 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 187 202 0.24 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_59530 329b64a273c4a98eb63e4da2193940ad 373 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 167 184 0.05 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_59530 329b64a273c4a98eb63e4da2193940ad 373 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 150 166 0.42 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_59530 329b64a273c4a98eb63e4da2193940ad 373 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 233 246 8.4 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_59530 329b64a273c4a98eb63e4da2193940ad 373 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 132 148 0.57 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_59530 329b64a273c4a98eb63e4da2193940ad 373 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 282 299 0.0066 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_59530 329b64a273c4a98eb63e4da2193940ad 373 SUPERFAMILY SSF51120 112 249 1.15E-17 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_59530 329b64a273c4a98eb63e4da2193940ad 373 Gene3D G3DSA:2.150.10.10 109 166 1.7E-6 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_59530 329b64a273c4a98eb63e4da2193940ad 373 Gene3D G3DSA:2.150.10.10 167 230 3.4E-10 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_59530 329b64a273c4a98eb63e4da2193940ad 373 SUPERFAMILY SSF51120 233 360 1.02E-12 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_59530 329b64a273c4a98eb63e4da2193940ad 373 PRINTS PR00313 NodO calcium binding signature 195 203 1.4E-10 T 14-10-2018 AMIS_59530 329b64a273c4a98eb63e4da2193940ad 373 PRINTS PR00313 NodO calcium binding signature 129 140 1.4E-10 T 14-10-2018 AMIS_59530 329b64a273c4a98eb63e4da2193940ad 373 PRINTS PR00313 NodO calcium binding signature 328 337 1.4E-10 T 14-10-2018 AMIS_59530 329b64a273c4a98eb63e4da2193940ad 373 PRINTS PR00313 NodO calcium binding signature 283 291 1.4E-10 T 14-10-2018 AMIS_59530 329b64a273c4a98eb63e4da2193940ad 373 Gene3D G3DSA:2.150.10.10 239 335 1.0E-13 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_14290 ee4d61a9d1c94e33bce35248d21d56a6 578 SMART SM00479 32 200 6.7E-50 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AMIS_14290 ee4d61a9d1c94e33bce35248d21d56a6 578 Pfam PF00929 Exonuclease 34 191 1.8E-32 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AMIS_14290 ee4d61a9d1c94e33bce35248d21d56a6 578 Gene3D G3DSA:3.40.1440.10 220 316 6.5E-22 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 AMIS_14290 ee4d61a9d1c94e33bce35248d21d56a6 578 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 29 195 4.0E-26 T 14-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMIS_14290 ee4d61a9d1c94e33bce35248d21d56a6 578 SUPERFAMILY SSF53098 28 212 1.9E-52 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily AMIS_14290 ee4d61a9d1c94e33bce35248d21d56a6 578 SUPERFAMILY SSF82771 233 311 1.44E-12 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 AMIS_14290 ee4d61a9d1c94e33bce35248d21d56a6 578 Gene3D G3DSA:3.30.420.10 25 200 1.8E-49 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMIS_14290 ee4d61a9d1c94e33bce35248d21d56a6 578 Pfam PF01541 GIY-YIG catalytic domain 235 309 2.3E-5 T 14-10-2018 IPR000305 GIY-YIG endonuclease AMIS_14290 ee4d61a9d1c94e33bce35248d21d56a6 578 SMART SM00465 233 314 2.1E-11 T 14-10-2018 IPR000305 GIY-YIG endonuclease AMIS_74370 ba095d54fa76ded760309fd989779b48 634 Pfam PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain 35 266 3.4E-97 T 14-10-2018 IPR035078 Phosphoenolpyruvate carboxykinase, GTP-utilising, N-terminal GO:0004611|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 AMIS_74370 ba095d54fa76ded760309fd989779b48 634 Gene3D G3DSA:3.90.228.20 270 627 3.6E-270 T 14-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AMIS_74370 ba095d54fa76ded760309fd989779b48 634 Pfam PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain 270 631 4.2E-171 T 14-10-2018 IPR035077 Phosphoenolpyruvate carboxykinase, GTP-utilising, C-terminal GO:0004611|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 AMIS_74370 ba095d54fa76ded760309fd989779b48 634 Gene3D G3DSA:3.40.449.10 34 269 3.6E-270 T 14-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AMIS_74370 ba095d54fa76ded760309fd989779b48 634 Gene3D G3DSA:2.170.8.10 70 423 3.6E-270 T 14-10-2018 AMIS_74370 ba095d54fa76ded760309fd989779b48 634 PIRSF PIRSF001348 14 634 5.5E-276 T 14-10-2018 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 AMIS_74370 ba095d54fa76ded760309fd989779b48 634 SUPERFAMILY SSF68923 25 269 1.41E-93 T 14-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AMIS_74370 ba095d54fa76ded760309fd989779b48 634 Hamap MF_00452 Phosphoenolpyruvate carboxykinase [GTP] [pckG]. 23 632 49.58 T 14-10-2018 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 AMIS_74370 ba095d54fa76ded760309fd989779b48 634 ProSitePatterns PS00505 Phosphoenolpyruvate carboxykinase (GTP) signature. 294 302 - T 14-10-2018 IPR018091 Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site GO:0004613 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 AMIS_74370 ba095d54fa76ded760309fd989779b48 634 SUPERFAMILY SSF53795 270 631 7.55E-158 T 14-10-2018 AMIS_72160 4a7965d1ba7ae0971d6d1e8045b656e1 716 Pfam PF07497 Rho termination factor, RNA-binding domain 344 421 6.9E-29 T 14-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 AMIS_72160 4a7965d1ba7ae0971d6d1e8045b656e1 716 Pfam PF07498 Rho termination factor, N-terminal domain 28 65 7.0E-11 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 AMIS_72160 4a7965d1ba7ae0971d6d1e8045b656e1 716 SUPERFAMILY SSF68912 27 65 7.85E-6 T 14-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily AMIS_72160 4a7965d1ba7ae0971d6d1e8045b656e1 716 Gene3D G3DSA:1.10.720.10 26 68 3.1E-6 T 14-10-2018 AMIS_72160 4a7965d1ba7ae0971d6d1e8045b656e1 716 SMART SM00382 463 648 6.6E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_72160 4a7965d1ba7ae0971d6d1e8045b656e1 716 Gene3D G3DSA:2.40.50.140 287 425 1.8E-29 T 14-10-2018 AMIS_72160 4a7965d1ba7ae0971d6d1e8045b656e1 716 TIGRFAM TIGR00767 rho: transcription termination factor Rho 28 710 2.6E-192 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 AMIS_72160 4a7965d1ba7ae0971d6d1e8045b656e1 716 Gene3D G3DSA:3.40.50.300 427 710 1.1E-119 T 14-10-2018 AMIS_72160 4a7965d1ba7ae0971d6d1e8045b656e1 716 SMART SM00959 27 68 1.8E-11 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 AMIS_72160 4a7965d1ba7ae0971d6d1e8045b656e1 716 SMART SM00357 345 414 2.3E-7 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 AMIS_72160 4a7965d1ba7ae0971d6d1e8045b656e1 716 SUPERFAMILY SSF52540 414 663 2.09E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_72160 4a7965d1ba7ae0971d6d1e8045b656e1 716 Hamap MF_01884 Transcription termination factor Rho [rho]. 336 712 196.108 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 AMIS_72160 4a7965d1ba7ae0971d6d1e8045b656e1 716 SUPERFAMILY SSF50249 344 421 2.06E-14 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMIS_72160 4a7965d1ba7ae0971d6d1e8045b656e1 716 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 452 656 6.4E-22 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMIS_78820 3c504ff0c5fd6941c2faed5bef2ec64e 146 SUPERFAMILY SSF46785 20 133 4.87E-26 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_78820 3c504ff0c5fd6941c2faed5bef2ec64e 146 Pfam PF12802 MarR family 31 85 3.5E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_78820 3c504ff0c5fd6941c2faed5bef2ec64e 146 ProSitePatterns PS01117 MarR-type HTH domain signature. 60 94 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site AMIS_78820 3c504ff0c5fd6941c2faed5bef2ec64e 146 SMART SM00347 18 121 5.4E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_78820 3c504ff0c5fd6941c2faed5bef2ec64e 146 Gene3D G3DSA:1.10.10.10 2 135 7.0E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_25920 38d2d01d6eefdd4ed8633a43647fcd1e 329 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 244 264 5.1E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_25920 38d2d01d6eefdd4ed8633a43647fcd1e 329 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 142 158 5.1E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_25920 38d2d01d6eefdd4ed8633a43647fcd1e 329 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 97 108 5.1E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_25920 38d2d01d6eefdd4ed8633a43647fcd1e 329 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 202 219 5.1E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_25920 38d2d01d6eefdd4ed8633a43647fcd1e 329 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 31 48 5.1E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_25920 38d2d01d6eefdd4ed8633a43647fcd1e 329 SUPERFAMILY SSF51735 27 278 1.39E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_25920 38d2d01d6eefdd4ed8633a43647fcd1e 329 Pfam PF00106 short chain dehydrogenase 31 224 2.3E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_25920 38d2d01d6eefdd4ed8633a43647fcd1e 329 Gene3D G3DSA:3.40.50.720 19 329 1.5E-68 T 14-10-2018 AMIS_13650 21bdbc14a27f0ee19f94a4f2d2fcd80e 474 Gene3D G3DSA:3.10.20.70 4 106 6.1E-38 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMIS_13650 21bdbc14a27f0ee19f94a4f2d2fcd80e 474 Gene3D G3DSA:3.30.590.10 107 462 2.8E-148 T 14-10-2018 AMIS_13650 21bdbc14a27f0ee19f94a4f2d2fcd80e 474 SUPERFAMILY SSF54368 5 102 5.49E-33 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMIS_13650 21bdbc14a27f0ee19f94a4f2d2fcd80e 474 SMART SM01230 104 383 2.9E-153 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMIS_13650 21bdbc14a27f0ee19f94a4f2d2fcd80e 474 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 7 473 3.3E-202 T 14-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMIS_13650 21bdbc14a27f0ee19f94a4f2d2fcd80e 474 ProSitePatterns PS00180 Glutamine synthetase signature 1. 52 70 - T 14-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AMIS_13650 21bdbc14a27f0ee19f94a4f2d2fcd80e 474 SUPERFAMILY SSF55931 105 473 1.86E-138 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AMIS_13650 21bdbc14a27f0ee19f94a4f2d2fcd80e 474 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 261 276 - T 14-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AMIS_13650 21bdbc14a27f0ee19f94a4f2d2fcd80e 474 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 16 96 4.1E-26 T 14-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AMIS_13650 21bdbc14a27f0ee19f94a4f2d2fcd80e 474 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 390 402 - T 14-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMIS_13650 21bdbc14a27f0ee19f94a4f2d2fcd80e 474 Pfam PF00120 Glutamine synthetase, catalytic domain 105 471 1.7E-132 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMIS_1780 db77bdb72447259b6310a34f478f32d6 204 SUPERFAMILY SSF53597 2 181 5.24E-29 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AMIS_1780 db77bdb72447259b6310a34f478f32d6 204 Gene3D G3DSA:3.40.430.10 1 186 1.4E-40 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AMIS_1780 db77bdb72447259b6310a34f478f32d6 204 Pfam PF01872 RibD C-terminal domain 6 173 1.9E-13 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 AMIS_2960 dcc6cee60d15965f640d51f3e6f40138 510 Pfam PF00361 Proton-conducting membrane transporter 151 446 8.5E-73 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_2960 dcc6cee60d15965f640d51f3e6f40138 510 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 13 498 1.1E-110 T 14-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 AMIS_2960 dcc6cee60d15965f640d51f3e6f40138 510 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 9 499 17.536 T 14-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 AMIS_18450 5354801e48831c66169bf363febea45c 381 Gene3D G3DSA:3.40.640.10 42 274 3.6E-86 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_18450 5354801e48831c66169bf363febea45c 381 Gene3D G3DSA:3.90.1150.10 13 374 3.6E-86 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMIS_18450 5354801e48831c66169bf363febea45c 381 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 213 232 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AMIS_18450 5354801e48831c66169bf363febea45c 381 Pfam PF00266 Aminotransferase class-V 25 373 2.5E-70 T 14-10-2018 IPR000192 Aminotransferase class V domain AMIS_18450 5354801e48831c66169bf363febea45c 381 SUPERFAMILY SSF53383 8 380 1.85E-78 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_29990 5f123d8fca6b6df05ffb0ee5af54443e 444 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 24 415 20.986 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AMIS_29990 5f123d8fca6b6df05ffb0ee5af54443e 444 Gene3D G3DSA:1.20.1530.10 22 414 2.6E-140 T 14-10-2018 IPR023171 Na/H antiporter domain superfamily AMIS_29990 5f123d8fca6b6df05ffb0ee5af54443e 444 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 28 404 8.3E-99 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AMIS_29990 5f123d8fca6b6df05ffb0ee5af54443e 444 Pfam PF06965 Na+/H+ antiporter 1 27 406 1.6E-133 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AMIS_78060 0a75560b199b2ddb6682e49b4abfbc3e 329 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 28 208 1.5E-42 T 14-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AMIS_78060 0a75560b199b2ddb6682e49b4abfbc3e 329 SUPERFAMILY SSF82829 216 319 1.96E-11 T 14-10-2018 AMIS_78060 0a75560b199b2ddb6682e49b4abfbc3e 329 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 15 314 20.548 T 14-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AMIS_78060 0a75560b199b2ddb6682e49b4abfbc3e 329 Pfam PF09179 TilS substrate binding domain 253 320 7.6E-10 T 14-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AMIS_78060 0a75560b199b2ddb6682e49b4abfbc3e 329 Pfam PF01171 PP-loop family 28 204 3.9E-37 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 AMIS_78060 0a75560b199b2ddb6682e49b4abfbc3e 329 Gene3D G3DSA:3.40.50.620 20 239 9.7E-62 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMIS_78060 0a75560b199b2ddb6682e49b4abfbc3e 329 SUPERFAMILY SSF52402 28 239 1.26E-46 T 14-10-2018 AMIS_70440 74d7789250dd30a34828b398b6ac2fc4 732 Gene3D G3DSA:3.40.50.2000 180 336 6.1E-13 T 14-10-2018 AMIS_70440 74d7789250dd30a34828b398b6ac2fc4 732 SUPERFAMILY SSF53756 385 727 8.37E-20 T 14-10-2018 AMIS_70440 74d7789250dd30a34828b398b6ac2fc4 732 Pfam PF13524 Glycosyl transferases group 1 271 344 7.5E-6 T 14-10-2018 AMIS_70440 74d7789250dd30a34828b398b6ac2fc4 732 SUPERFAMILY SSF53756 9 346 1.14E-15 T 14-10-2018 AMIS_70440 74d7789250dd30a34828b398b6ac2fc4 732 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 619 686 8.5E-9 T 14-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 AMIS_70440 74d7789250dd30a34828b398b6ac2fc4 732 Gene3D G3DSA:3.40.50.2000 546 708 6.1E-16 T 14-10-2018 AMIS_38510 f58afb6ea56d120b6660300cc4a13e8a 105 Gene3D G3DSA:2.102.10.10 4 105 9.7E-26 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AMIS_38510 f58afb6ea56d120b6660300cc4a13e8a 105 Pfam PF00355 Rieske [2Fe-2S] domain 10 85 5.5E-15 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AMIS_38510 f58afb6ea56d120b6660300cc4a13e8a 105 SUPERFAMILY SSF50022 7 103 9.69E-28 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AMIS_57270 bbd8eebe04a837f7c01121500925df5c 399 SUPERFAMILY SSF55961 107 336 1.07E-30 T 14-10-2018 AMIS_57270 bbd8eebe04a837f7c01121500925df5c 399 Pfam PF00355 Rieske [2Fe-2S] domain 6 86 8.5E-20 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AMIS_57270 bbd8eebe04a837f7c01121500925df5c 399 Gene3D G3DSA:3.30.530.90 138 339 1.4E-10 T 14-10-2018 AMIS_57270 bbd8eebe04a837f7c01121500925df5c 399 SUPERFAMILY SSF50022 2 115 1.96E-31 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AMIS_57270 bbd8eebe04a837f7c01121500925df5c 399 Gene3D G3DSA:2.102.10.10 2 135 3.7E-38 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AMIS_75180 cb42ff2502da5df47a067704446230dc 527 Pfam PF16192 C-terminal four TMM region of protein-O-mannosyltransferase 332 524 1.3E-19 T 14-10-2018 IPR032421 Protein O-mannosyl-transferase, C-terminal four TM domain KEGG: 00514+2.4.1.109|KEGG: 00515+2.4.1.109|MetaCyc: PWY-7921|MetaCyc: PWY-7922|MetaCyc: PWY-7979|Reactome: R-HSA-5173105 AMIS_75180 cb42ff2502da5df47a067704446230dc 527 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 56 295 1.5E-11 T 14-10-2018 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 Reactome: R-HSA-5173105 AMIS_5950 cb6295a0b64ba90078151c4110aabebd 1296 Gene3D G3DSA:1.10.150.390 1199 1262 6.6E-28 T 14-10-2018 AMIS_5950 cb6295a0b64ba90078151c4110aabebd 1296 Gene3D G3DSA:1.10.274.100 565 724 2.4E-42 T 14-10-2018 AMIS_5950 cb6295a0b64ba90078151c4110aabebd 1296 Gene3D G3DSA:1.10.132.30 725 859 8.1E-51 T 14-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMIS_5950 cb6295a0b64ba90078151c4110aabebd 1296 Gene3D G3DSA:1.10.40.90 449 491 8.9E-24 T 14-10-2018 AMIS_5950 cb6295a0b64ba90078151c4110aabebd 1296 Pfam PF00623 RNA polymerase Rpb1, domain 2 467 560 4.5E-28 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMIS_5950 cb6295a0b64ba90078151c4110aabebd 1296 Pfam PF00623 RNA polymerase Rpb1, domain 2 419 462 4.3E-8 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMIS_5950 cb6295a0b64ba90078151c4110aabebd 1296 Pfam PF04998 RNA polymerase Rpb1, domain 5 835 1198 2.3E-64 T 14-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMIS_5950 cb6295a0b64ba90078151c4110aabebd 1296 SMART SM00663 310 589 8.4E-177 T 14-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMIS_5950 cb6295a0b64ba90078151c4110aabebd 1296 SUPERFAMILY SSF64484 5 1251 0.0 T 14-10-2018 AMIS_5950 cb6295a0b64ba90078151c4110aabebd 1296 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 10 1250 0.0 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMIS_5950 cb6295a0b64ba90078151c4110aabebd 1296 Pfam PF04983 RNA polymerase Rpb1, domain 3 564 728 3.8E-24 T 14-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMIS_5950 cb6295a0b64ba90078151c4110aabebd 1296 Pfam PF04997 RNA polymerase Rpb1, domain 1 7 417 6.0E-81 T 14-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMIS_5950 cb6295a0b64ba90078151c4110aabebd 1296 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 4 1260 17.593 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMIS_5950 cb6295a0b64ba90078151c4110aabebd 1296 Gene3D G3DSA:1.10.1790.20 1018 1197 3.6E-66 T 14-10-2018 AMIS_5950 cb6295a0b64ba90078151c4110aabebd 1296 Gene3D G3DSA:2.40.50.100 1034 1098 3.6E-66 T 14-10-2018 AMIS_5950 cb6295a0b64ba90078151c4110aabebd 1296 Pfam PF05000 RNA polymerase Rpb1, domain 4 760 823 1.8E-10 T 14-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMIS_18970 75715491ebf52ba764eefb603319d476 108 Pfam PF13646 HEAT repeats 21 91 1.2E-6 T 14-10-2018 AMIS_18970 75715491ebf52ba764eefb603319d476 108 SUPERFAMILY SSF48371 31 90 1.19E-5 T 14-10-2018 IPR016024 Armadillo-type fold AMIS_300 da83d56b3e6f934a90beb269260b29fe 385 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 8 119 4.8E-37 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMIS_300 da83d56b3e6f934a90beb269260b29fe 385 Gene3D G3DSA:1.10.540.10 1 121 6.4E-42 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMIS_300 da83d56b3e6f934a90beb269260b29fe 385 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 223 9.3E-22 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMIS_300 da83d56b3e6f934a90beb269260b29fe 385 Gene3D G3DSA:2.40.110.10 122 241 1.9E-35 T 14-10-2018 AMIS_300 da83d56b3e6f934a90beb269260b29fe 385 SUPERFAMILY SSF47203 233 383 4.67E-49 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMIS_300 da83d56b3e6f934a90beb269260b29fe 385 PIRSF PIRSF016578 131 383 1.5E-9 T 14-10-2018 AMIS_300 da83d56b3e6f934a90beb269260b29fe 385 PIRSF PIRSF016578 8 110 0.015 T 14-10-2018 AMIS_300 da83d56b3e6f934a90beb269260b29fe 385 Gene3D G3DSA:1.20.140.10 242 385 8.9E-47 T 14-10-2018 AMIS_300 da83d56b3e6f934a90beb269260b29fe 385 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 342 361 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AMIS_300 da83d56b3e6f934a90beb269260b29fe 385 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 235 383 2.1E-46 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMIS_300 da83d56b3e6f934a90beb269260b29fe 385 SUPERFAMILY SSF56645 2 248 9.69E-81 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMIS_3750 bbb37d8483af666854a729a90df3078b 445 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 348 356 - T 14-10-2018 IPR018120 Glycoside hydrolase family 1, active site AMIS_3750 bbb37d8483af666854a729a90df3078b 445 PRINTS PR00131 Glycosyl hydrolase family 1 signature 348 356 1.0E-19 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMIS_3750 bbb37d8483af666854a729a90df3078b 445 PRINTS PR00131 Glycosyl hydrolase family 1 signature 415 427 1.0E-19 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMIS_3750 bbb37d8483af666854a729a90df3078b 445 PRINTS PR00131 Glycosyl hydrolase family 1 signature 370 381 1.0E-19 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMIS_3750 bbb37d8483af666854a729a90df3078b 445 PRINTS PR00131 Glycosyl hydrolase family 1 signature 272 286 1.0E-19 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMIS_3750 bbb37d8483af666854a729a90df3078b 445 PRINTS PR00131 Glycosyl hydrolase family 1 signature 391 408 1.0E-19 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMIS_3750 bbb37d8483af666854a729a90df3078b 445 Pfam PF00232 Glycosyl hydrolase family 1 3 443 1.6E-122 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMIS_3750 bbb37d8483af666854a729a90df3078b 445 Gene3D G3DSA:3.20.20.80 1 445 9.6E-144 T 14-10-2018 AMIS_3750 bbb37d8483af666854a729a90df3078b 445 SUPERFAMILY SSF51445 4 443 1.14E-133 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_3750 bbb37d8483af666854a729a90df3078b 445 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 9 23 - T 14-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site AMIS_47220 9b635e668a29fb49cc83da419cda2132 318 SUPERFAMILY SSF161098 90 297 4.58E-22 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_47220 9b635e668a29fb49cc83da419cda2132 318 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 312 7.2E-37 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_47220 9b635e668a29fb49cc83da419cda2132 318 Gene3D G3DSA:1.10.3720.10 89 309 3.1E-24 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_17250 53f9961484463b266b79cf5be1aa5ea2 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 1.8E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_17250 53f9961484463b266b79cf5be1aa5ea2 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 1.8E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_17250 53f9961484463b266b79cf5be1aa5ea2 189 SUPERFAMILY SSF48498 74 181 6.89E-17 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_17250 53f9961484463b266b79cf5be1aa5ea2 189 SUPERFAMILY SSF46689 7 61 9.23E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_17250 53f9961484463b266b79cf5be1aa5ea2 189 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 57 1.3E-14 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_17250 53f9961484463b266b79cf5be1aa5ea2 189 Gene3D G3DSA:1.10.357.10 7 183 3.7E-45 T 14-10-2018 AMIS_33460 f38553c9841f7e4dedbcdf1fdc7b6f37 524 Gene3D G3DSA:2.80.10.50 375 523 1.9E-37 T 14-10-2018 AMIS_33460 f38553c9841f7e4dedbcdf1fdc7b6f37 524 SUPERFAMILY SSF88946 5 98 5.81E-21 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_33460 f38553c9841f7e4dedbcdf1fdc7b6f37 524 Pfam PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain 386 516 7.7E-39 T 14-10-2018 IPR007934 Alpha-L-arabinofuranosidase B, arabinose-binding domain GO:0046373|GO:0046556 AMIS_33460 f38553c9841f7e4dedbcdf1fdc7b6f37 524 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 178 9.2E-18 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_33460 f38553c9841f7e4dedbcdf1fdc7b6f37 524 SUPERFAMILY SSF110221 386 520 1.19E-32 T 14-10-2018 IPR036195 Alpha-L-arabinofuranosidase B, arabinose-binding domain superfamily GO:0046373|GO:0046556 AMIS_33460 f38553c9841f7e4dedbcdf1fdc7b6f37 524 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 43 74 - T 14-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_33460 f38553c9841f7e4dedbcdf1fdc7b6f37 524 Pfam PF04542 Sigma-70 region 2 21 88 2.2E-13 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_33460 f38553c9841f7e4dedbcdf1fdc7b6f37 524 Gene3D G3DSA:1.10.1740.10 2 112 1.4E-19 T 14-10-2018 AMIS_53270 2bc919a0d2cbaa4de8995cd303587e5f 312 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 71 298 2.4E-38 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMIS_53270 2bc919a0d2cbaa4de8995cd303587e5f 312 Gene3D G3DSA:3.40.190.10 166 262 1.7E-62 T 14-10-2018 AMIS_53270 2bc919a0d2cbaa4de8995cd303587e5f 312 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 94 107 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site AMIS_53270 2bc919a0d2cbaa4de8995cd303587e5f 312 SMART SM00062 70 300 2.4E-44 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMIS_53270 2bc919a0d2cbaa4de8995cd303587e5f 312 Gene3D G3DSA:3.40.190.10 71 297 1.7E-62 T 14-10-2018 AMIS_53270 2bc919a0d2cbaa4de8995cd303587e5f 312 SUPERFAMILY SSF53850 54 298 3.59E-45 T 14-10-2018 AMIS_66270 301a00911e7eb81ae855b04a5ab81379 386 SUPERFAMILY SSF55874 292 382 1.31E-11 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_66270 301a00911e7eb81ae855b04a5ab81379 386 Pfam PF07730 Histidine kinase 194 259 5.1E-15 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMIS_66270 301a00911e7eb81ae855b04a5ab81379 386 Gene3D G3DSA:3.30.565.10 262 383 2.9E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_16450 b6abd716c15e78bb6248d28b0c0ea778 223 Pfam PF03167 Uracil DNA glycosylase superfamily 63 215 2.0E-22 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMIS_16450 b6abd716c15e78bb6248d28b0c0ea778 223 SMART SM00986 61 216 5.0E-4 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMIS_16450 b6abd716c15e78bb6248d28b0c0ea778 223 SMART SM00987 61 216 5.0E-4 T 14-10-2018 AMIS_16450 b6abd716c15e78bb6248d28b0c0ea778 223 SUPERFAMILY SSF52141 59 220 5.67E-41 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMIS_16450 b6abd716c15e78bb6248d28b0c0ea778 223 Gene3D G3DSA:3.40.470.10 59 223 2.2E-60 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMIS_30370 9fd39979baf5325879580721be5221ee 65 Gene3D G3DSA:3.30.70.20 1 65 1.0E-18 T 14-10-2018 AMIS_30370 9fd39979baf5325879580721be5221ee 65 SUPERFAMILY SSF54862 2 64 2.84E-14 T 14-10-2018 AMIS_30370 9fd39979baf5325879580721be5221ee 65 PRINTS PR00352 3Fe-4S ferredoxin signature 16 26 1.4E-6 T 14-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 AMIS_30370 9fd39979baf5325879580721be5221ee 65 PRINTS PR00352 3Fe-4S ferredoxin signature 48 60 1.4E-6 T 14-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 AMIS_30370 9fd39979baf5325879580721be5221ee 65 PRINTS PR00352 3Fe-4S ferredoxin signature 5 16 1.4E-6 T 14-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 AMIS_30370 9fd39979baf5325879580721be5221ee 65 Pfam PF13370 4Fe-4S single cluster domain of Ferredoxin I 6 61 3.8E-14 T 14-10-2018 AMIS_63900 11d4bd767c0314ee7b4e08c3a54cdfca 703 Gene3D G3DSA:2.60.40.10 1 136 8.9E-49 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_63900 11d4bd767c0314ee7b4e08c3a54cdfca 703 Gene3D G3DSA:2.60.40.1180 592 701 1.1E-17 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta AMIS_63900 11d4bd767c0314ee7b4e08c3a54cdfca 703 SUPERFAMILY SSF51011 592 699 1.22E-23 T 14-10-2018 AMIS_63900 11d4bd767c0314ee7b4e08c3a54cdfca 703 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 6 699 1.7E-303 T 14-10-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 AMIS_63900 11d4bd767c0314ee7b4e08c3a54cdfca 703 Gene3D G3DSA:3.20.20.80 138 580 6.8E-183 T 14-10-2018 AMIS_63900 11d4bd767c0314ee7b4e08c3a54cdfca 703 Pfam PF00128 Alpha amylase, catalytic domain 189 531 4.7E-15 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMIS_63900 11d4bd767c0314ee7b4e08c3a54cdfca 703 SUPERFAMILY SSF81296 5 147 8.96E-46 T 14-10-2018 IPR014756 Immunoglobulin E-set AMIS_63900 11d4bd767c0314ee7b4e08c3a54cdfca 703 SMART SM00642 181 566 7.5E-8 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMIS_63900 11d4bd767c0314ee7b4e08c3a54cdfca 703 SUPERFAMILY SSF51445 133 573 2.88E-130 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_63900 11d4bd767c0314ee7b4e08c3a54cdfca 703 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 10 96 6.0E-21 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 AMIS_69900 b6d902402f40fb8c29b9d928ff4d2735 380 Pfam PF03861 ANTAR domain 176 228 8.1E-12 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 AMIS_69900 b6d902402f40fb8c29b9d928ff4d2735 380 Pfam PF01590 GAF domain 25 155 3.0E-14 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_69900 b6d902402f40fb8c29b9d928ff4d2735 380 SMART SM01012 173 228 3.1E-10 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 AMIS_69900 b6d902402f40fb8c29b9d928ff4d2735 380 SUPERFAMILY SSF55874 277 365 1.31E-9 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_69900 b6d902402f40fb8c29b9d928ff4d2735 380 SUPERFAMILY SSF55781 9 161 5.67E-21 T 14-10-2018 AMIS_69900 b6d902402f40fb8c29b9d928ff4d2735 380 Gene3D G3DSA:3.30.565.10 243 369 2.6E-23 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_69900 b6d902402f40fb8c29b9d928ff4d2735 380 SMART SM00065 25 173 4.0E-6 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_69900 b6d902402f40fb8c29b9d928ff4d2735 380 Gene3D G3DSA:3.30.450.40 3 177 2.6E-25 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_69900 b6d902402f40fb8c29b9d928ff4d2735 380 Pfam PF13581 Histidine kinase-like ATPase domain 252 362 1.2E-9 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_79240 cc4ad54ff6f109cab1314c18bb15107f 356 Pfam PF01032 FecCD transport family 28 347 1.9E-91 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AMIS_79240 cc4ad54ff6f109cab1314c18bb15107f 356 Gene3D G3DSA:1.10.3470.10 15 354 6.3E-101 T 14-10-2018 IPR037294 ABC transporter, BtuC-like AMIS_79240 cc4ad54ff6f109cab1314c18bb15107f 356 SUPERFAMILY SSF81345 15 347 4.84E-80 T 14-10-2018 IPR037294 ABC transporter, BtuC-like AMIS_28490 d87f98a21ccfb0b194a894972d390426 212 Pfam PF08281 Sigma-70, region 4 140 190 1.6E-13 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_28490 d87f98a21ccfb0b194a894972d390426 212 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 38 193 2.7E-26 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_28490 d87f98a21ccfb0b194a894972d390426 212 Gene3D G3DSA:1.10.10.10 106 197 1.0E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_28490 d87f98a21ccfb0b194a894972d390426 212 SUPERFAMILY SSF88659 133 194 1.31E-14 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_28490 d87f98a21ccfb0b194a894972d390426 212 Gene3D G3DSA:1.10.1740.10 24 105 4.2E-26 T 14-10-2018 AMIS_28490 d87f98a21ccfb0b194a894972d390426 212 SUPERFAMILY SSF88946 23 125 1.57E-25 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_28490 d87f98a21ccfb0b194a894972d390426 212 Pfam PF04542 Sigma-70 region 2 43 110 9.4E-19 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_24340 a6ce52c675187de69209f99549c3f0db 325 Gene3D G3DSA:3.40.50.720 3 304 1.5E-118 T 14-10-2018 AMIS_24340 a6ce52c675187de69209f99549c3f0db 325 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 3 319 3.5E-124 T 14-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 AMIS_24340 a6ce52c675187de69209f99549c3f0db 325 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 303 5.9E-79 T 14-10-2018 IPR016040 NAD(P)-binding domain AMIS_24340 a6ce52c675187de69209f99549c3f0db 325 SUPERFAMILY SSF51735 3 320 1.63E-99 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_24340 a6ce52c675187de69209f99549c3f0db 325 Gene3D G3DSA:3.90.25.10 191 312 1.5E-118 T 14-10-2018 AMIS_46100 f7671ace0429bf7eb866e35bc2d87207 654 Pfam PF14520 Helix-hairpin-helix domain 431 490 0.0031 T 14-10-2018 AMIS_46100 f7671ace0429bf7eb866e35bc2d87207 654 Gene3D G3DSA:3.30.470.30 74 238 1.3E-57 T 14-10-2018 AMIS_46100 f7671ace0429bf7eb866e35bc2d87207 654 Pfam PF12826 Helix-hairpin-helix motif 500 552 2.3E-12 T 14-10-2018 AMIS_46100 f7671ace0429bf7eb866e35bc2d87207 654 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 19 649 1.6E-145 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AMIS_46100 f7671ace0429bf7eb866e35bc2d87207 654 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 312 384 7.0E-24 T 14-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 AMIS_46100 f7671ace0429bf7eb866e35bc2d87207 654 Gene3D G3DSA:3.40.50.10190 577 654 5.9E-19 T 14-10-2018 IPR036420 BRCT domain superfamily AMIS_46100 f7671ace0429bf7eb866e35bc2d87207 654 SUPERFAMILY SSF47781 394 571 4.08E-34 T 14-10-2018 IPR010994 RuvA domain 2-like AMIS_46100 f7671ace0429bf7eb866e35bc2d87207 654 Gene3D G3DSA:1.10.150.20 494 573 2.9E-16 T 14-10-2018 AMIS_46100 f7671ace0429bf7eb866e35bc2d87207 654 Hamap MF_01588 DNA ligase [ligA]. 8 653 36.816 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AMIS_46100 f7671ace0429bf7eb866e35bc2d87207 654 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 580 651 8.4E-12 T 14-10-2018 IPR001357 BRCT domain AMIS_46100 f7671ace0429bf7eb866e35bc2d87207 654 SUPERFAMILY SSF52113 580 653 5.09E-15 T 14-10-2018 IPR036420 BRCT domain superfamily AMIS_46100 f7671ace0429bf7eb866e35bc2d87207 654 Gene3D G3DSA:3.30.1490.70 79 306 1.3E-57 T 14-10-2018 AMIS_46100 f7671ace0429bf7eb866e35bc2d87207 654 SUPERFAMILY SSF56091 9 307 2.01E-63 T 14-10-2018 AMIS_46100 f7671ace0429bf7eb866e35bc2d87207 654 Gene3D G3DSA:1.10.150.20 421 492 2.1E-12 T 14-10-2018 AMIS_46100 f7671ace0429bf7eb866e35bc2d87207 654 Gene3D G3DSA:2.40.50.140 309 392 1.3E-24 T 14-10-2018 AMIS_46100 f7671ace0429bf7eb866e35bc2d87207 654 SMART SM00292 579 653 6.3E-7 T 14-10-2018 IPR001357 BRCT domain AMIS_46100 f7671ace0429bf7eb866e35bc2d87207 654 SMART SM00532 6 432 3.7E-93 T 14-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 AMIS_46100 f7671ace0429bf7eb866e35bc2d87207 654 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 9 307 3.3E-54 T 14-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 AMIS_46100 f7671ace0429bf7eb866e35bc2d87207 654 SUPERFAMILY SSF50249 309 383 2.06E-20 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMIS_46100 f7671ace0429bf7eb866e35bc2d87207 654 PIRSF PIRSF001604 1 654 5.6E-156 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AMIS_76370 00079fffbee16505b60a2aec3bd83576 254 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 12 247 2.5E-50 T 14-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 AMIS_76370 00079fffbee16505b60a2aec3bd83576 254 Pfam PF01311 Bacterial export proteins, family 1 11 242 2.1E-59 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AMIS_76370 00079fffbee16505b60a2aec3bd83576 254 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 199 218 3.5E-27 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AMIS_76370 00079fffbee16505b60a2aec3bd83576 254 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 177 199 3.5E-27 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AMIS_76370 00079fffbee16505b60a2aec3bd83576 254 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 19 40 3.5E-27 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AMIS_76370 00079fffbee16505b60a2aec3bd83576 254 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 77 96 3.5E-27 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AMIS_49280 5d468cff7e4c6c42275a88e71a4dcf20 390 SUPERFAMILY SSF51556 3 381 8.16E-94 T 14-10-2018 IPR032466 Metal-dependent hydrolase AMIS_49280 5d468cff7e4c6c42275a88e71a4dcf20 390 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 3 375 6.7E-106 T 14-10-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 AMIS_49280 5d468cff7e4c6c42275a88e71a4dcf20 390 Gene3D G3DSA:3.20.20.140 1 386 5.0E-135 T 14-10-2018 AMIS_38290 a452e01ef7cf9ca39fdefc1302d5d019 686 Gene3D G3DSA:1.20.1640.10 483 636 2.5E-9 T 14-10-2018 AMIS_38290 a452e01ef7cf9ca39fdefc1302d5d019 686 SUPERFAMILY SSF82866 448 648 1.27E-26 T 14-10-2018 AMIS_38290 a452e01ef7cf9ca39fdefc1302d5d019 686 Gene3D G3DSA:1.20.1640.10 147 303 1.5E-12 T 14-10-2018 AMIS_38290 a452e01ef7cf9ca39fdefc1302d5d019 686 Gene3D G3DSA:3.30.70.1440 431 482 2.5E-9 T 14-10-2018 AMIS_38290 a452e01ef7cf9ca39fdefc1302d5d019 686 Pfam PF03176 MMPL family 78 344 2.5E-57 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 AMIS_38290 a452e01ef7cf9ca39fdefc1302d5d019 686 Pfam PF03176 MMPL family 417 649 2.5E-48 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 AMIS_38290 a452e01ef7cf9ca39fdefc1302d5d019 686 SUPERFAMILY SSF82866 83 313 7.85E-35 T 14-10-2018 AMIS_38290 a452e01ef7cf9ca39fdefc1302d5d019 686 Gene3D G3DSA:3.30.70.1440 93 146 1.5E-12 T 14-10-2018 AMIS_71690 08a57188d27e97d8822624510a7c66a9 155 ProSitePatterns PS00934 Glyoxalase I signature 1. 26 47 - T 14-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AMIS_71690 08a57188d27e97d8822624510a7c66a9 155 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 25 138 7.3E-22 T 14-10-2018 AMIS_71690 08a57188d27e97d8822624510a7c66a9 155 TIGRFAM TIGR03081 metmalonyl_epim: methylmalonyl-CoA epimerase 23 153 2.9E-42 T 14-10-2018 IPR017515 Methylmalonyl-CoA epimerase KEGG: 00280+5.1.99.1|KEGG: 00630+5.1.99.1|KEGG: 00640+5.1.99.1|KEGG: 00720+5.1.99.1|MetaCyc: PWY-5741|MetaCyc: PWY-5743|MetaCyc: PWY-5789|MetaCyc: PWY-6728|MetaCyc: PWY-7384|MetaCyc: PWY-7854|Reactome: R-HSA-71032 AMIS_71690 08a57188d27e97d8822624510a7c66a9 155 SUPERFAMILY SSF54593 18 154 7.12E-35 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_71690 08a57188d27e97d8822624510a7c66a9 155 Gene3D G3DSA:3.10.180.10 20 154 3.6E-41 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_75550 e3c50926d0b41fadb73ca9e0d989cddd 300 PIRSF PIRSF016184 1 295 4.9E-81 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AMIS_75550 e3c50926d0b41fadb73ca9e0d989cddd 300 Gene3D G3DSA:3.10.310.10 8 286 1.2E-70 T 14-10-2018 AMIS_75550 e3c50926d0b41fadb73ca9e0d989cddd 300 SUPERFAMILY SSF54506 4 294 2.27E-59 T 14-10-2018 AMIS_75550 e3c50926d0b41fadb73ca9e0d989cddd 300 Pfam PF02567 Phenazine biosynthesis-like protein 9 290 5.4E-45 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AMIS_75550 e3c50926d0b41fadb73ca9e0d989cddd 300 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 7 295 2.3E-52 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AMIS_75550 e3c50926d0b41fadb73ca9e0d989cddd 300 Gene3D G3DSA:3.10.310.10 122 284 1.2E-70 T 14-10-2018 AMIS_6060 f35fab7ebc40d79d24fd36afbaa19ac4 279 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 47.597 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 AMIS_6060 f35fab7ebc40d79d24fd36afbaa19ac4 279 Gene3D G3DSA:4.10.950.10 197 274 3.8E-30 T 14-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_6060 f35fab7ebc40d79d24fd36afbaa19ac4 279 Gene3D G3DSA:2.40.50.140 1 115 1.6E-48 T 14-10-2018 AMIS_6060 f35fab7ebc40d79d24fd36afbaa19ac4 279 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 251 2.5E-53 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 AMIS_6060 f35fab7ebc40d79d24fd36afbaa19ac4 279 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 8.0E-126 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 AMIS_6060 f35fab7ebc40d79d24fd36afbaa19ac4 279 SMART SM01382 125 253 1.3E-86 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 AMIS_6060 f35fab7ebc40d79d24fd36afbaa19ac4 279 Gene3D G3DSA:2.30.30.30 116 196 2.6E-30 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 AMIS_6060 f35fab7ebc40d79d24fd36afbaa19ac4 279 PIRSF PIRSF002158 3 274 3.7E-93 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_6060 f35fab7ebc40d79d24fd36afbaa19ac4 279 SUPERFAMILY SSF50249 2 126 5.14E-50 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMIS_6060 f35fab7ebc40d79d24fd36afbaa19ac4 279 ProSitePatterns PS00467 Ribosomal protein L2 signature. 219 230 - T 14-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_6060 f35fab7ebc40d79d24fd36afbaa19ac4 279 SMART SM01383 42 119 5.1E-43 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_6060 f35fab7ebc40d79d24fd36afbaa19ac4 279 SUPERFAMILY SSF50104 127 271 4.57E-54 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily AMIS_6060 f35fab7ebc40d79d24fd36afbaa19ac4 279 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 119 1.3E-32 T 14-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_76410 14408e413fdf5b151b1033263ec5e9de 322 Pfam PF02154 Flagellar motor switch protein FliM 29 217 3.7E-43 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AMIS_76410 14408e413fdf5b151b1033263ec5e9de 322 PIRSF PIRSF002888 2 320 5.8E-81 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AMIS_76410 14408e413fdf5b151b1033263ec5e9de 322 PRINTS PR00955 Flagellar motor switch protein FliM signature 105 124 3.1E-9 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AMIS_76410 14408e413fdf5b151b1033263ec5e9de 322 PRINTS PR00955 Flagellar motor switch protein FliM signature 200 218 3.1E-9 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AMIS_76410 14408e413fdf5b151b1033263ec5e9de 322 PRINTS PR00955 Flagellar motor switch protein FliM signature 80 96 3.1E-9 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AMIS_76410 14408e413fdf5b151b1033263ec5e9de 322 SUPERFAMILY SSF103039 36 212 1.28E-15 T 14-10-2018 IPR028976 CheC-like superfamily AMIS_76410 14408e413fdf5b151b1033263ec5e9de 322 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 242 305 1.6E-12 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) AMIS_76410 14408e413fdf5b151b1033263ec5e9de 322 Gene3D G3DSA:3.40.1550.10 35 219 1.3E-49 T 14-10-2018 IPR028976 CheC-like superfamily AMIS_76410 14408e413fdf5b151b1033263ec5e9de 322 SUPERFAMILY SSF101801 241 313 5.36E-11 T 14-10-2018 IPR036429 SpoA-like superfamily AMIS_76410 14408e413fdf5b151b1033263ec5e9de 322 Gene3D G3DSA:2.30.330.10 228 305 5.6E-6 T 14-10-2018 IPR036429 SpoA-like superfamily AMIS_79730 7cdee4ab451d8cf2751c0186b7b515f6 407 Pfam PF01757 Acyltransferase family 24 371 1.3E-21 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 AMIS_13210 e088c5e4959800bcb13016dff26e0e5b 157 Gene3D G3DSA:3.40.30.10 1 153 8.4E-47 T 14-10-2018 AMIS_13210 e088c5e4959800bcb13016dff26e0e5b 157 PIRSF PIRSF000239 1 153 3.4E-26 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AMIS_13210 e088c5e4959800bcb13016dff26e0e5b 157 SUPERFAMILY SSF52833 1 152 5.81E-44 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMIS_13210 e088c5e4959800bcb13016dff26e0e5b 157 Pfam PF00578 AhpC/TSA family 5 130 2.4E-35 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AMIS_77670 ae4029e8e6ceefe6be3077bc77b3d2ac 298 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 190 206 1.2E-6 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 AMIS_77670 ae4029e8e6ceefe6be3077bc77b3d2ac 298 SMART SM00525 189 209 1.6E-4 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 AMIS_77670 ae4029e8e6ceefe6be3077bc77b3d2ac 298 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 32 161 8.5E-14 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AMIS_77670 ae4029e8e6ceefe6be3077bc77b3d2ac 298 Gene3D G3DSA:1.10.1670.10 8 208 5.1E-67 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 AMIS_77670 ae4029e8e6ceefe6be3077bc77b3d2ac 298 SUPERFAMILY SSF48150 4 216 6.6E-66 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AMIS_77670 ae4029e8e6ceefe6be3077bc77b3d2ac 298 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 190 206 - T 14-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AMIS_77670 ae4029e8e6ceefe6be3077bc77b3d2ac 298 SMART SM00478 36 188 5.5E-33 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AMIS_77670 ae4029e8e6ceefe6be3077bc77b3d2ac 298 ProSitePatterns PS01155 Endonuclease III family signature. 99 128 - T 14-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 AMIS_77670 ae4029e8e6ceefe6be3077bc77b3d2ac 298 Gene3D G3DSA:1.10.340.30 17 129 5.1E-67 T 14-10-2018 AMIS_77670 ae4029e8e6ceefe6be3077bc77b3d2ac 298 Pfam PF00633 Helix-hairpin-helix motif 96 123 4.6E-6 T 14-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 AMIS_51930 5751275ba1d08cd4f045d240eccd8b86 271 SUPERFAMILY SSF54506 4 268 1.86E-60 T 14-10-2018 AMIS_51930 5751275ba1d08cd4f045d240eccd8b86 271 Pfam PF02567 Phenazine biosynthesis-like protein 9 269 6.2E-64 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AMIS_51930 5751275ba1d08cd4f045d240eccd8b86 271 Gene3D G3DSA:3.10.310.10 111 265 1.5E-71 T 14-10-2018 AMIS_51930 5751275ba1d08cd4f045d240eccd8b86 271 PIRSF PIRSF016184 1 271 3.4E-63 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AMIS_51930 5751275ba1d08cd4f045d240eccd8b86 271 Gene3D G3DSA:3.10.310.10 9 266 1.5E-71 T 14-10-2018 AMIS_51930 5751275ba1d08cd4f045d240eccd8b86 271 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 3 266 5.2E-48 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AMIS_61790 e40d3fd17dcf2e77621a948c4b0ff5a5 173 SUPERFAMILY SSF54593 9 136 6.6E-22 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_61790 e40d3fd17dcf2e77621a948c4b0ff5a5 173 Gene3D G3DSA:3.30.720.110 71 137 1.7E-17 T 14-10-2018 AMIS_58360 f69cb1943fbb41da4a9c3ca2a28ae086 167 PIRSF PIRSF026622 5 161 3.3E-23 T 14-10-2018 IPR015837 Uncharacterised conserved protein UCP026622, CAAX protease-type AMIS_58360 f69cb1943fbb41da4a9c3ca2a28ae086 167 Pfam PF02517 CAAX protease self-immunity 60 147 1.5E-17 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 AMIS_7580 668c1829336c0f6423e1c4aa48b0dca4 193 Pfam PF04977 Septum formation initiator 78 150 1.2E-15 T 14-10-2018 IPR007060 Septum formation initiator FtsL/DivIC AMIS_50100 62206fe3b630b1ad2289edcb2f20abac 318 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 152 272 6.8E-26 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 AMIS_50100 62206fe3b630b1ad2289edcb2f20abac 318 Gene3D G3DSA:3.40.50.2000 150 316 5.1E-38 T 14-10-2018 AMIS_50100 62206fe3b630b1ad2289edcb2f20abac 318 Gene3D G3DSA:3.40.50.2000 1 49 3.1E-5 T 14-10-2018 AMIS_50100 62206fe3b630b1ad2289edcb2f20abac 318 SUPERFAMILY SSF53756 2 313 1.02E-52 T 14-10-2018 AMIS_62990 887ad9794224b4ad211b0c2b80071bfc 472 SUPERFAMILY SSF55874 294 435 7.73E-18 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_62990 887ad9794224b4ad211b0c2b80071bfc 472 Gene3D G3DSA:1.10.287.130 167 288 3.9E-20 T 14-10-2018 AMIS_62990 887ad9794224b4ad211b0c2b80071bfc 472 Pfam PF00512 His Kinase A (phospho-acceptor) domain 217 282 6.0E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_62990 887ad9794224b4ad211b0c2b80071bfc 472 SMART SM00387 336 439 7.2E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_62990 887ad9794224b4ad211b0c2b80071bfc 472 Pfam PF00672 HAMP domain 167 210 7.2E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_62990 887ad9794224b4ad211b0c2b80071bfc 472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 387 1.6E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_62990 887ad9794224b4ad211b0c2b80071bfc 472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 417 1.6E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_62990 887ad9794224b4ad211b0c2b80071bfc 472 SMART SM00304 162 214 3.9E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_62990 887ad9794224b4ad211b0c2b80071bfc 472 Gene3D G3DSA:3.30.565.10 298 442 1.1E-15 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_62990 887ad9794224b4ad211b0c2b80071bfc 472 SUPERFAMILY SSF47384 200 284 7.65E-8 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_62990 887ad9794224b4ad211b0c2b80071bfc 472 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 342 433 1.8E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_49750 509ea5321444f4b9ab490107e966dad1 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 2.2E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_49750 509ea5321444f4b9ab490107e966dad1 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 2.2E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_49750 509ea5321444f4b9ab490107e966dad1 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 2.2E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_49750 509ea5321444f4b9ab490107e966dad1 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 2.2E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_49750 509ea5321444f4b9ab490107e966dad1 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 2.2E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_49750 509ea5321444f4b9ab490107e966dad1 234 Gene3D G3DSA:3.40.50.720 2 233 3.1E-67 T 14-10-2018 AMIS_49750 509ea5321444f4b9ab490107e966dad1 234 Pfam PF00106 short chain dehydrogenase 3 198 3.1E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_49750 509ea5321444f4b9ab490107e966dad1 234 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMIS_49750 509ea5321444f4b9ab490107e966dad1 234 SUPERFAMILY SSF51735 4 231 1.55E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_49750 509ea5321444f4b9ab490107e966dad1 234 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 8.7E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_49750 509ea5321444f4b9ab490107e966dad1 234 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 8.7E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_49750 509ea5321444f4b9ab490107e966dad1 234 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 8.7E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_11970 34da611fe777211d5f2cf51c0f42f383 476 Pfam PF00005 ABC transporter 22 166 3.7E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_11970 34da611fe777211d5f2cf51c0f42f383 476 SUPERFAMILY SSF52540 269 463 1.81E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_11970 34da611fe777211d5f2cf51c0f42f383 476 Pfam PF00005 ABC transporter 270 417 1.4E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_11970 34da611fe777211d5f2cf51c0f42f383 476 Gene3D G3DSA:3.40.50.300 259 464 2.4E-51 T 14-10-2018 AMIS_11970 34da611fe777211d5f2cf51c0f42f383 476 SUPERFAMILY SSF52540 5 216 5.67E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_11970 34da611fe777211d5f2cf51c0f42f383 476 Gene3D G3DSA:3.40.50.300 2 236 5.3E-59 T 14-10-2018 AMIS_11970 34da611fe777211d5f2cf51c0f42f383 476 SMART SM00382 30 214 1.9E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_11970 34da611fe777211d5f2cf51c0f42f383 476 SMART SM00382 279 466 1.5E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_11970 34da611fe777211d5f2cf51c0f42f383 476 ProSitePatterns PS00211 ABC transporters family signature. 390 404 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_11970 34da611fe777211d5f2cf51c0f42f383 476 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_7860 e320d7b480ed7159c389f5ac025b61d5 483 SUPERFAMILY SSF55154 5 198 1.44E-38 T 14-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 AMIS_7860 e320d7b480ed7159c389f5ac025b61d5 483 SMART SM01118 4 198 1.1E-16 T 14-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 AMIS_7860 e320d7b480ed7159c389f5ac025b61d5 483 Pfam PF01928 CYTH domain 5 175 5.2E-15 T 14-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 AMIS_7860 e320d7b480ed7159c389f5ac025b61d5 483 Gene3D G3DSA:1.40.20.10 203 481 1.5E-49 T 14-10-2018 IPR038186 CHAD domain superfamily AMIS_7860 e320d7b480ed7159c389f5ac025b61d5 483 Pfam PF05235 CHAD domain 221 437 3.1E-50 T 14-10-2018 IPR007899 CHAD domain AMIS_7860 e320d7b480ed7159c389f5ac025b61d5 483 SMART SM00880 221 471 2.2E-58 T 14-10-2018 IPR007899 CHAD domain AMIS_7860 e320d7b480ed7159c389f5ac025b61d5 483 Gene3D G3DSA:2.40.320.10 4 196 2.6E-14 T 14-10-2018 AMIS_9040 df7ddd8451a4da66274682fa9995bf94 410 Pfam PF00482 Type II secretion system (T2SS), protein F 277 399 2.9E-31 T 14-10-2018 IPR018076 Type II secretion system F domain AMIS_9040 df7ddd8451a4da66274682fa9995bf94 410 Pfam PF00482 Type II secretion system (T2SS), protein F 73 196 8.2E-29 T 14-10-2018 IPR018076 Type II secretion system F domain AMIS_9040 df7ddd8451a4da66274682fa9995bf94 410 PRINTS PR00812 Bacterial general secretion pathway protein F signature 69 81 4.8E-12 T 14-10-2018 IPR003004 GspF/PilC family AMIS_9040 df7ddd8451a4da66274682fa9995bf94 410 PRINTS PR00812 Bacterial general secretion pathway protein F signature 372 386 4.8E-12 T 14-10-2018 IPR003004 GspF/PilC family AMIS_9040 df7ddd8451a4da66274682fa9995bf94 410 PRINTS PR00812 Bacterial general secretion pathway protein F signature 168 196 4.8E-12 T 14-10-2018 IPR003004 GspF/PilC family AMIS_9040 df7ddd8451a4da66274682fa9995bf94 410 PRINTS PR00812 Bacterial general secretion pathway protein F signature 388 407 4.8E-12 T 14-10-2018 IPR003004 GspF/PilC family AMIS_9040 df7ddd8451a4da66274682fa9995bf94 410 Gene3D G3DSA:1.20.81.30 56 172 9.0E-31 T 14-10-2018 AMIS_9040 df7ddd8451a4da66274682fa9995bf94 410 Gene3D G3DSA:1.20.81.30 260 371 1.2E-31 T 14-10-2018 AMIS_61860 3f0ad6ae85bb4eeaa673b76034b47e80 203 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 1 162 6.6E-58 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AMIS_61860 3f0ad6ae85bb4eeaa673b76034b47e80 203 Gene3D G3DSA:3.30.110.10 70 164 1.1E-33 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 AMIS_61860 3f0ad6ae85bb4eeaa673b76034b47e80 203 SUPERFAMILY SSF55200 79 162 9.81E-31 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 AMIS_61860 3f0ad6ae85bb4eeaa673b76034b47e80 203 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 164 27.421 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AMIS_61860 3f0ad6ae85bb4eeaa673b76034b47e80 203 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 78 161 2.8E-33 T 14-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 AMIS_61860 3f0ad6ae85bb4eeaa673b76034b47e80 203 SUPERFAMILY SSF54364 1 72 9.02E-26 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AMIS_61860 3f0ad6ae85bb4eeaa673b76034b47e80 203 Gene3D G3DSA:3.10.20.80 1 69 2.5E-29 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AMIS_61860 3f0ad6ae85bb4eeaa673b76034b47e80 203 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 1 70 3.2E-30 T 14-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AMIS_53580 ca8fd0a667e1b7240c1dc6fa94a3e304 271 Gene3D G3DSA:3.60.20.10 1 240 2.5E-62 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMIS_53580 ca8fd0a667e1b7240c1dc6fa94a3e304 271 Hamap MF_00289_B Proteasome subunit alpha [prcA]. 1 233 45.24 T 14-10-2018 IPR022296 Proteasome, alpha subunit, bacterial GO:0004298|GO:0019773|GO:0051603 AMIS_53580 ca8fd0a667e1b7240c1dc6fa94a3e304 271 Pfam PF00227 Proteasome subunit 25 207 9.0E-29 T 14-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 AMIS_53580 ca8fd0a667e1b7240c1dc6fa94a3e304 271 SUPERFAMILY SSF56235 10 229 2.85E-41 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMIS_53580 ca8fd0a667e1b7240c1dc6fa94a3e304 271 TIGRFAM TIGR03691 20S_bact_alpha: proteasome, alpha subunit 2 229 2.6E-103 T 14-10-2018 IPR022296 Proteasome, alpha subunit, bacterial GO:0004298|GO:0019773|GO:0051603 AMIS_81210 b4edc20e67e05afd80271d5f1b6e28a2 189 Gene3D G3DSA:3.30.300.20 42 124 1.8E-12 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta AMIS_81210 b4edc20e67e05afd80271d5f1b6e28a2 189 Gene3D G3DSA:3.30.1370.50 125 189 6.1E-21 T 14-10-2018 IPR036867 R3H domain superfamily GO:0003676 AMIS_81210 b4edc20e67e05afd80271d5f1b6e28a2 189 SUPERFAMILY SSF82708 143 186 1.86E-7 T 14-10-2018 IPR036867 R3H domain superfamily GO:0003676 AMIS_81210 b4edc20e67e05afd80271d5f1b6e28a2 189 Pfam PF01424 R3H domain 129 186 7.8E-14 T 14-10-2018 IPR001374 R3H domain GO:0003676 AMIS_81210 b4edc20e67e05afd80271d5f1b6e28a2 189 SMART SM00393 109 188 1.4E-19 T 14-10-2018 IPR001374 R3H domain GO:0003676 AMIS_1630 8714337123590aca6813df6b7197075f 304 Gene3D G3DSA:1.10.10.1320 4 93 1.4E-7 T 14-10-2018 AMIS_1630 8714337123590aca6813df6b7197075f 304 Pfam PF13490 Putative zinc-finger 3 37 7.1E-9 T 14-10-2018 IPR027383 Putative zinc-finger AMIS_58620 cab71ad7730a3c1929710a4fa98e052a 147 SUPERFAMILY SSF49452 46 143 4.66E-27 T 14-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 AMIS_58620 cab71ad7730a3c1929710a4fa98e052a 147 Gene3D G3DSA:2.60.40.10 35 145 8.7E-29 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_58620 cab71ad7730a3c1929710a4fa98e052a 147 Pfam PF00686 Starch binding domain 46 139 3.1E-26 T 14-10-2018 IPR002044 Carbohydrate binding module family 20 GO:2001070 AMIS_58620 cab71ad7730a3c1929710a4fa98e052a 147 SMART SM01065 44 142 4.9E-26 T 14-10-2018 IPR002044 Carbohydrate binding module family 20 GO:2001070 AMIS_51820 e747cb8b2fbd9797b83ba9b25361c7a1 154 Pfam PF02577 Bifunctional nuclease 6 128 5.8E-45 T 14-10-2018 IPR003729 Bifunctional nuclease domain GO:0004518 AMIS_51820 e747cb8b2fbd9797b83ba9b25361c7a1 154 SUPERFAMILY SSF103256 2 136 2.09E-45 T 14-10-2018 IPR036104 Bifunctional nuclease superfamily GO:0004518 AMIS_51820 e747cb8b2fbd9797b83ba9b25361c7a1 154 Gene3D G3DSA:3.10.690.10 1 140 6.4E-48 T 14-10-2018 IPR036104 Bifunctional nuclease superfamily GO:0004518 AMIS_14230 de535a3ea5064a039bb9c31edff60965 368 SUPERFAMILY SSF50022 285 367 4.58E-25 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AMIS_14230 de535a3ea5064a039bb9c31edff60965 368 Gene3D G3DSA:2.102.10.10 208 365 4.8E-31 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AMIS_14230 de535a3ea5064a039bb9c31edff60965 368 Pfam PF00355 Rieske [2Fe-2S] domain 285 340 1.0E-8 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AMIS_9450 3539f7a3f805b198056829c93f6200b7 248 Pfam PF12706 Beta-lactamase superfamily domain 30 214 8.1E-22 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMIS_9450 3539f7a3f805b198056829c93f6200b7 248 SMART SM00849 18 196 7.9E-7 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMIS_9450 3539f7a3f805b198056829c93f6200b7 248 SUPERFAMILY SSF56281 1 248 9.57E-54 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMIS_9450 3539f7a3f805b198056829c93f6200b7 248 Gene3D G3DSA:3.60.15.10 1 248 5.5E-72 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMIS_18930 b0e555d641b0e54281ff0b491210f2ca 635 SUPERFAMILY SSF55785 24 132 4.01E-20 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_18930 b0e555d641b0e54281ff0b491210f2ca 635 Pfam PF08448 PAS fold 18 126 1.6E-21 T 14-10-2018 IPR013656 PAS fold-4 AMIS_18930 b0e555d641b0e54281ff0b491210f2ca 635 Pfam PF00072 Response regulator receiver domain 515 626 1.2E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_18930 b0e555d641b0e54281ff0b491210f2ca 635 SUPERFAMILY SSF55785 121 248 8.2E-20 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_18930 b0e555d641b0e54281ff0b491210f2ca 635 SUPERFAMILY SSF47384 262 337 4.71E-10 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_18930 b0e555d641b0e54281ff0b491210f2ca 635 SMART SM00091 136 206 0.0014 T 14-10-2018 IPR000014 PAS domain AMIS_18930 b0e555d641b0e54281ff0b491210f2ca 635 SMART SM00091 11 77 7.7E-9 T 14-10-2018 IPR000014 PAS domain AMIS_18930 b0e555d641b0e54281ff0b491210f2ca 635 Gene3D G3DSA:3.30.565.10 339 493 3.9E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_18930 b0e555d641b0e54281ff0b491210f2ca 635 Gene3D G3DSA:3.30.450.20 133 246 3.0E-24 T 14-10-2018 AMIS_18930 b0e555d641b0e54281ff0b491210f2ca 635 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 132 256 9.9E-12 T 14-10-2018 IPR000014 PAS domain AMIS_18930 b0e555d641b0e54281ff0b491210f2ca 635 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 12 131 2.1E-15 T 14-10-2018 IPR000014 PAS domain AMIS_18930 b0e555d641b0e54281ff0b491210f2ca 635 SMART SM00387 379 492 9.9E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_18930 b0e555d641b0e54281ff0b491210f2ca 635 SMART SM00388 272 338 6.3E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_18930 b0e555d641b0e54281ff0b491210f2ca 635 SUPERFAMILY SSF52172 511 631 3.84E-29 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_18930 b0e555d641b0e54281ff0b491210f2ca 635 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 435 1.6E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_18930 b0e555d641b0e54281ff0b491210f2ca 635 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 449 1.6E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_18930 b0e555d641b0e54281ff0b491210f2ca 635 PRINTS PR00344 Bacterial sensor protein C-terminal signature 476 489 1.6E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_18930 b0e555d641b0e54281ff0b491210f2ca 635 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 470 1.6E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_18930 b0e555d641b0e54281ff0b491210f2ca 635 Gene3D G3DSA:3.40.50.2300 511 635 1.6E-28 T 14-10-2018 AMIS_18930 b0e555d641b0e54281ff0b491210f2ca 635 Gene3D G3DSA:3.30.450.20 9 132 9.7E-27 T 14-10-2018 AMIS_18930 b0e555d641b0e54281ff0b491210f2ca 635 Pfam PF08447 PAS fold 162 244 2.6E-13 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 AMIS_18930 b0e555d641b0e54281ff0b491210f2ca 635 Pfam PF00512 His Kinase A (phospho-acceptor) domain 272 336 1.6E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_18930 b0e555d641b0e54281ff0b491210f2ca 635 SMART SM00086 208 250 4.1E-4 T 14-10-2018 IPR001610 PAC motif AMIS_18930 b0e555d641b0e54281ff0b491210f2ca 635 SUPERFAMILY SSF55874 328 490 1.44E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_18930 b0e555d641b0e54281ff0b491210f2ca 635 Gene3D G3DSA:1.10.287.130 264 336 2.4E-20 T 14-10-2018 AMIS_18930 b0e555d641b0e54281ff0b491210f2ca 635 SMART SM00448 513 626 2.7E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_18930 b0e555d641b0e54281ff0b491210f2ca 635 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 380 490 7.7E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_35090 ce0e03255a36c104c7a92113838f6638 775 Gene3D G3DSA:3.40.50.740 101 579 1.2E-161 T 14-10-2018 AMIS_35090 ce0e03255a36c104c7a92113838f6638 775 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 471 488 - T 14-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AMIS_35090 ce0e03255a36c104c7a92113838f6638 775 Pfam PF00384 Molybdopterin oxidoreductase 96 521 1.7E-62 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_35090 ce0e03255a36c104c7a92113838f6638 775 SUPERFAMILY SSF50692 624 770 1.94E-41 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily AMIS_35090 ce0e03255a36c104c7a92113838f6638 775 Gene3D G3DSA:2.40.40.20 641 771 5.0E-44 T 14-10-2018 AMIS_35090 ce0e03255a36c104c7a92113838f6638 775 Pfam PF01568 Molydopterin dinucleotide binding domain 650 764 1.2E-29 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 AMIS_35090 ce0e03255a36c104c7a92113838f6638 775 SUPERFAMILY SSF53706 40 604 4.84E-156 T 14-10-2018 AMIS_35090 ce0e03255a36c104c7a92113838f6638 775 Gene3D G3DSA:3.40.228.10 175 376 1.2E-161 T 14-10-2018 AMIS_44600 60ab4610a41ef44f447447cef0e1a838 274 SUPERFAMILY SSF46689 225 269 1.03E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_44600 60ab4610a41ef44f447447cef0e1a838 274 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 223 267 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AMIS_44600 60ab4610a41ef44f447447cef0e1a838 274 SMART SM00342 189 271 7.5E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMIS_44600 60ab4610a41ef44f447447cef0e1a838 274 SUPERFAMILY SSF51182 6 196 3.26E-13 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily AMIS_44600 60ab4610a41ef44f447447cef0e1a838 274 Pfam PF12833 Helix-turn-helix domain 195 268 1.3E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMIS_44600 60ab4610a41ef44f447447cef0e1a838 274 Pfam PF02311 AraC-like ligand binding domain 53 100 4.3E-5 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AMIS_44600 60ab4610a41ef44f447447cef0e1a838 274 Gene3D G3DSA:1.10.10.60 174 273 1.8E-20 T 14-10-2018 AMIS_44600 60ab4610a41ef44f447447cef0e1a838 274 Gene3D G3DSA:2.60.120.10 7 117 1.2E-8 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMIS_26580 5c1747ae428a3bd3d346c51b1a39fc33 304 Gene3D G3DSA:3.90.180.10 9 300 1.6E-66 T 14-10-2018 AMIS_26580 5c1747ae428a3bd3d346c51b1a39fc33 304 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 88 5.2E-8 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMIS_26580 5c1747ae428a3bd3d346c51b1a39fc33 304 Pfam PF13602 Zinc-binding dehydrogenase 188 301 5.2E-13 T 14-10-2018 AMIS_26580 5c1747ae428a3bd3d346c51b1a39fc33 304 SUPERFAMILY SSF50129 1 151 3.96E-34 T 14-10-2018 IPR011032 GroES-like superfamily AMIS_26580 5c1747ae428a3bd3d346c51b1a39fc33 304 Gene3D G3DSA:3.40.50.720 131 252 1.6E-66 T 14-10-2018 AMIS_26580 5c1747ae428a3bd3d346c51b1a39fc33 304 SMART SM00829 10 301 5.7E-11 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMIS_26580 5c1747ae428a3bd3d346c51b1a39fc33 304 SUPERFAMILY SSF51735 120 249 2.3E-20 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_71940 84765d722d2541542814b829a7493e59 522 Gene3D G3DSA:3.40.50.300 97 382 2.3E-118 T 14-10-2018 AMIS_71940 84765d722d2541542814b829a7493e59 522 Gene3D G3DSA:1.20.150.20 383 517 2.4E-45 T 14-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMIS_71940 84765d722d2541542814b829a7493e59 522 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 2.1E-44 T 14-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMIS_71940 84765d722d2541542814b829a7493e59 522 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 152 375 2.1E-67 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMIS_71940 84765d722d2541542814b829a7493e59 522 SUPERFAMILY SSF47917 384 511 2.62E-44 T 14-10-2018 AMIS_71940 84765d722d2541542814b829a7493e59 522 SUPERFAMILY SSF52540 99 381 2.08E-95 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_71940 84765d722d2541542814b829a7493e59 522 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMIS_71940 84765d722d2541542814b829a7493e59 522 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 6 511 4.5E-239 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMIS_71940 84765d722d2541542814b829a7493e59 522 SUPERFAMILY SSF50615 15 97 1.18E-22 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMIS_71940 84765d722d2541542814b829a7493e59 522 Gene3D G3DSA:2.40.30.20 4 96 3.5E-26 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMIS_71940 84765d722d2541542814b829a7493e59 522 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 29 95 1.9E-12 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMIS_71940 84765d722d2541542814b829a7493e59 522 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 4 512 48.327 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMIS_290 9e2f33321406ed290991e8de252cfc57 507 SUPERFAMILY SSF52096 235 505 4.73E-79 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMIS_290 9e2f33321406ed290991e8de252cfc57 507 Gene3D G3DSA:3.90.226.10 245 506 1.0E-78 T 14-10-2018 AMIS_290 9e2f33321406ed290991e8de252cfc57 507 Gene3D G3DSA:3.90.226.10 2 244 1.6E-75 T 14-10-2018 AMIS_290 9e2f33321406ed290991e8de252cfc57 507 Pfam PF01039 Carboxyl transferase domain 26 504 4.8E-148 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 AMIS_290 9e2f33321406ed290991e8de252cfc57 507 SUPERFAMILY SSF52096 9 248 3.66E-63 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMIS_55850 1ca463ba4e096d75b63a559153a2f4f2 368 SUPERFAMILY SSF58104 66 260 2.22E-35 T 14-10-2018 AMIS_55850 1ca463ba4e096d75b63a559153a2f4f2 368 SMART SM00283 49 296 5.6E-5 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_55850 1ca463ba4e096d75b63a559153a2f4f2 368 SUPERFAMILY SSF141371 259 350 1.49E-9 T 14-10-2018 AMIS_55850 1ca463ba4e096d75b63a559153a2f4f2 368 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 119 258 1.2E-24 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_55850 1ca463ba4e096d75b63a559153a2f4f2 368 Gene3D G3DSA:1.10.287.950 58 261 2.4E-33 T 14-10-2018 AMIS_55850 1ca463ba4e096d75b63a559153a2f4f2 368 Pfam PF07238 PilZ domain 261 361 6.1E-13 T 14-10-2018 IPR009875 PilZ domain GO:0035438 AMIS_55850 1ca463ba4e096d75b63a559153a2f4f2 368 Gene3D G3DSA:2.40.10.220 262 366 1.1E-11 T 14-10-2018 AMIS_78800 cab761fea93c419fc66e7ea35a13d588 187 Gene3D G3DSA:1.10.357.10 2 187 4.5E-52 T 14-10-2018 AMIS_78800 cab761fea93c419fc66e7ea35a13d588 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 1.7E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_78800 cab761fea93c419fc66e7ea35a13d588 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 1.7E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_78800 cab761fea93c419fc66e7ea35a13d588 187 SUPERFAMILY SSF48498 82 185 1.42E-17 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_78800 cab761fea93c419fc66e7ea35a13d588 187 SUPERFAMILY SSF46689 3 85 2.19E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_78800 cab761fea93c419fc66e7ea35a13d588 187 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 63 7.7E-16 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_7910 a41a9f08de048f058b374f1e036a6247 161 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 15 113 3.1E-4 T 14-10-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system AMIS_17840 bdb8cbc8b877f19b2d0df6753118b0b0 164 Pfam PF06897 Protein of unknown function (DUF1269) 61 158 3.5E-36 T 14-10-2018 IPR009200 Protein of unknown function DUF1269, membrane associated AMIS_36810 a6390226c12f480fff98b36b65648ee8 311 Pfam PF10370 Domain of unknown function (DUF2437) 1 61 1.9E-8 T 14-10-2018 IPR018833 Domain of unknown function DUF2437 AMIS_36810 a6390226c12f480fff98b36b65648ee8 311 SUPERFAMILY SSF56529 64 285 1.57E-56 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AMIS_36810 a6390226c12f480fff98b36b65648ee8 311 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 67 285 7.0E-47 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 AMIS_36810 a6390226c12f480fff98b36b65648ee8 311 Gene3D G3DSA:3.90.850.10 36 285 1.7E-70 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AMIS_9940 044c7cfd42efe19cb7e6a8179486dd95 542 Gene3D G3DSA:1.20.1740.10 37 494 4.3E-23 T 14-10-2018 AMIS_9940 044c7cfd42efe19cb7e6a8179486dd95 542 Pfam PF00324 Amino acid permease 48 494 2.9E-22 T 14-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 AMIS_9940 044c7cfd42efe19cb7e6a8179486dd95 542 PIRSF PIRSF006060 21 498 1.3E-38 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AMIS_48540 39445216517798de84cb819c6bb04c73 652 SUPERFAMILY SSF54106 541 591 1.7E-6 T 14-10-2018 AMIS_48540 39445216517798de84cb819c6bb04c73 652 SMART SM00257 602 651 1.6E-6 T 14-10-2018 IPR018392 LysM domain AMIS_48540 39445216517798de84cb819c6bb04c73 652 SMART SM00257 542 591 3.7E-8 T 14-10-2018 IPR018392 LysM domain AMIS_48540 39445216517798de84cb819c6bb04c73 652 SUPERFAMILY SSF54106 601 651 5.23E-7 T 14-10-2018 AMIS_48540 39445216517798de84cb819c6bb04c73 652 Pfam PF03098 Animal haem peroxidase 189 337 7.4E-11 T 14-10-2018 IPR019791 Haem peroxidase, animal type AMIS_48540 39445216517798de84cb819c6bb04c73 652 Gene3D G3DSA:3.10.350.10 602 649 2.3E-13 T 14-10-2018 IPR036779 LysM domain superfamily AMIS_48540 39445216517798de84cb819c6bb04c73 652 Gene3D G3DSA:3.10.350.10 541 589 3.2E-13 T 14-10-2018 IPR036779 LysM domain superfamily AMIS_48540 39445216517798de84cb819c6bb04c73 652 Gene3D G3DSA:1.10.640.10 53 490 8.7E-15 T 14-10-2018 IPR037120 Haem peroxidase domain superfamily, animal type AMIS_48540 39445216517798de84cb819c6bb04c73 652 Pfam PF01476 LysM domain 603 651 2.6E-12 T 14-10-2018 IPR018392 LysM domain AMIS_48540 39445216517798de84cb819c6bb04c73 652 Pfam PF01476 LysM domain 543 591 1.9E-10 T 14-10-2018 IPR018392 LysM domain AMIS_48540 39445216517798de84cb819c6bb04c73 652 SUPERFAMILY SSF48113 80 505 9.65E-53 T 14-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 AMIS_62660 f3d530efe626032d64843829e0982455 921 Gene3D G3DSA:3.40.1190.10 496 739 1.0E-37 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AMIS_62660 f3d530efe626032d64843829e0982455 921 SUPERFAMILY SSF56059 229 490 4.07E-28 T 14-10-2018 AMIS_62660 f3d530efe626032d64843829e0982455 921 SUPERFAMILY SSF53623 461 750 8.63E-41 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AMIS_62660 f3d530efe626032d64843829e0982455 921 Pfam PF08245 Mur ligase middle domain 503 719 5.8E-22 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AMIS_62660 f3d530efe626032d64843829e0982455 921 Pfam PF08443 RimK-like ATP-grasp domain 228 331 5.0E-7 T 14-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 AMIS_62660 f3d530efe626032d64843829e0982455 921 Gene3D G3DSA:3.30.1490.20 229 316 9.6E-15 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AMIS_62660 f3d530efe626032d64843829e0982455 921 Gene3D G3DSA:3.90.190.20 744 878 2.7E-17 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AMIS_62660 f3d530efe626032d64843829e0982455 921 SMART SM01209 228 345 0.0042 T 14-10-2018 AMIS_62660 f3d530efe626032d64843829e0982455 921 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 501 524 - T 14-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 AMIS_62660 f3d530efe626032d64843829e0982455 921 TIGRFAM TIGR02068 cya_phycin_syn: cyanophycin synthetase 3 876 4.9E-263 T 14-10-2018 IPR011810 Cyanophycin synthetase GO:0005524|GO:0009059|GO:0016874 MetaCyc: PWY-7052 AMIS_62660 f3d530efe626032d64843829e0982455 921 SUPERFAMILY SSF53244 743 871 7.63E-20 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AMIS_62660 f3d530efe626032d64843829e0982455 921 Gene3D G3DSA:3.30.470.20 385 490 2.5E-9 T 14-10-2018 AMIS_62660 f3d530efe626032d64843829e0982455 921 Pfam PF02875 Mur ligase family, glutamate ligase domain 745 826 5.5E-9 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 AMIS_40720 459772ec038740a030cde76a427318e8 393 Pfam PF13823 Alcohol dehydrogenase GroES-associated 1 23 2.2E-12 T 14-10-2018 IPR027399 Alcohol dehydrogenase GroES-associated AMIS_40720 459772ec038740a030cde76a427318e8 393 SUPERFAMILY SSF50129 1 186 8.52E-61 T 14-10-2018 IPR011032 GroES-like superfamily AMIS_40720 459772ec038740a030cde76a427318e8 393 Gene3D G3DSA:3.40.50.720 170 342 4.1E-123 T 14-10-2018 AMIS_40720 459772ec038740a030cde76a427318e8 393 Pfam PF00107 Zinc-binding dehydrogenase 189 258 2.8E-13 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMIS_40720 459772ec038740a030cde76a427318e8 393 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AMIS_40720 459772ec038740a030cde76a427318e8 393 Gene3D G3DSA:3.90.180.10 9 379 4.1E-123 T 14-10-2018 AMIS_40720 459772ec038740a030cde76a427318e8 393 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 143 1.9E-27 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMIS_40720 459772ec038740a030cde76a427318e8 393 SUPERFAMILY SSF51735 156 351 3.45E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_53170 ca59a73f69ec170d55fa404257ec6e34 275 Pfam PF08823 Putative peptidoglycan binding domain 207 271 7.9E-9 T 14-10-2018 IPR014927 Putative peptidoglycan binding AMIS_53170 ca59a73f69ec170d55fa404257ec6e34 275 Gene3D G3DSA:3.60.20.10 1 212 5.5E-72 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMIS_53170 ca59a73f69ec170d55fa404257ec6e34 275 Pfam PF06267 Family of unknown function (DUF1028) 2 197 1.5E-69 T 14-10-2018 IPR010430 Protein of unknown function DUF1028 AMIS_53170 ca59a73f69ec170d55fa404257ec6e34 275 SUPERFAMILY SSF56235 1 220 1.08E-65 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMIS_11750 d088d774635e5907f88378b0b31553bd 378 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 4 353 1.2E-116 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 AMIS_11750 d088d774635e5907f88378b0b31553bd 378 Gene3D G3DSA:2.60.260.20 257 365 5.3E-28 T 14-10-2018 AMIS_11750 d088d774635e5907f88378b0b31553bd 378 Pfam PF00226 DnaJ domain 4 65 9.2E-28 T 14-10-2018 IPR001623 DnaJ domain AMIS_11750 d088d774635e5907f88378b0b31553bd 378 SUPERFAMILY SSF49493 112 265 8.24E-17 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AMIS_11750 d088d774635e5907f88378b0b31553bd 378 SMART SM00271 3 60 1.4E-33 T 14-10-2018 IPR001623 DnaJ domain AMIS_11750 d088d774635e5907f88378b0b31553bd 378 Pfam PF00684 DnaJ central domain 146 210 2.8E-12 T 14-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 AMIS_11750 d088d774635e5907f88378b0b31553bd 378 SUPERFAMILY SSF46565 3 100 1.09E-33 T 14-10-2018 IPR036869 Chaperone J-domain superfamily AMIS_11750 d088d774635e5907f88378b0b31553bd 378 Pfam PF01556 DnaJ C terminal domain 122 336 4.7E-37 T 14-10-2018 IPR002939 Chaperone DnaJ, C-terminal AMIS_11750 d088d774635e5907f88378b0b31553bd 378 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 1 374 37.243 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 AMIS_11750 d088d774635e5907f88378b0b31553bd 378 SUPERFAMILY SSF57938 133 213 4.32E-17 T 14-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily AMIS_11750 d088d774635e5907f88378b0b31553bd 378 PRINTS PR00625 DnaJ domain signature 60 79 7.6E-25 T 14-10-2018 IPR001623 DnaJ domain AMIS_11750 d088d774635e5907f88378b0b31553bd 378 PRINTS PR00625 DnaJ domain signature 40 60 7.6E-25 T 14-10-2018 IPR001623 DnaJ domain AMIS_11750 d088d774635e5907f88378b0b31553bd 378 PRINTS PR00625 DnaJ domain signature 24 39 7.6E-25 T 14-10-2018 IPR001623 DnaJ domain AMIS_11750 d088d774635e5907f88378b0b31553bd 378 PRINTS PR00625 DnaJ domain signature 6 24 7.6E-25 T 14-10-2018 IPR001623 DnaJ domain AMIS_11750 d088d774635e5907f88378b0b31553bd 378 Gene3D G3DSA:2.60.260.20 116 252 8.9E-33 T 14-10-2018 AMIS_11750 d088d774635e5907f88378b0b31553bd 378 SUPERFAMILY SSF49493 262 347 2.22E-20 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AMIS_11750 d088d774635e5907f88378b0b31553bd 378 Gene3D G3DSA:2.10.230.10 146 210 8.9E-33 T 14-10-2018 AMIS_11750 d088d774635e5907f88378b0b31553bd 378 Gene3D G3DSA:1.10.287.110 1 110 4.2E-34 T 14-10-2018 IPR036869 Chaperone J-domain superfamily AMIS_24580 6cb159604510603a9eb26ec18ce20037 319 Gene3D G3DSA:1.10.3720.10 87 310 1.8E-20 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_24580 6cb159604510603a9eb26ec18ce20037 319 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 316 1.5E-36 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_24580 6cb159604510603a9eb26ec18ce20037 319 SUPERFAMILY SSF161098 93 300 3.92E-18 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_21140 473dee1d215eb563b5290d30e7e74212 79 SMART SM00421 15 72 8.6E-23 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_21140 473dee1d215eb563b5290d30e7e74212 79 SUPERFAMILY SSF46894 9 78 1.16E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_21140 473dee1d215eb563b5290d30e7e74212 79 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 32 48 3.0E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_21140 473dee1d215eb563b5290d30e7e74212 79 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 48 60 3.0E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_21140 473dee1d215eb563b5290d30e7e74212 79 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 18 32 3.0E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_21140 473dee1d215eb563b5290d30e7e74212 79 ProSitePatterns PS00622 LuxR-type HTH domain signature. 32 59 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_21140 473dee1d215eb563b5290d30e7e74212 79 Gene3D G3DSA:1.10.10.10 8 79 2.8E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_21140 473dee1d215eb563b5290d30e7e74212 79 Pfam PF00196 Bacterial regulatory proteins, luxR family 17 70 4.2E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_70920 76b5086fff66958ab1dbad62fdbc057e 292 Gene3D G3DSA:3.90.79.10 3 133 1.9E-30 T 14-10-2018 AMIS_70920 76b5086fff66958ab1dbad62fdbc057e 292 SUPERFAMILY SSF55811 6 129 1.62E-21 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMIS_70920 76b5086fff66958ab1dbad62fdbc057e 292 SUPERFAMILY SSF53254 141 272 1.84E-15 T 14-10-2018 IPR029033 Histidine phosphatase superfamily AMIS_70920 76b5086fff66958ab1dbad62fdbc057e 292 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMIS_70920 76b5086fff66958ab1dbad62fdbc057e 292 Gene3D G3DSA:3.40.50.1240 140 284 5.9E-25 T 14-10-2018 IPR029033 Histidine phosphatase superfamily AMIS_70920 76b5086fff66958ab1dbad62fdbc057e 292 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 141 217 3.6E-8 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AMIS_70920 76b5086fff66958ab1dbad62fdbc057e 292 Pfam PF00293 NUDIX domain 6 127 2.1E-13 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMIS_31710 f712a02330881941079be458acfca036 136 Pfam PF13191 AAA ATPase domain 7 131 1.0E-11 T 14-10-2018 AMIS_31710 f712a02330881941079be458acfca036 136 SUPERFAMILY SSF52540 20 132 3.18E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_50310 c202f39ccdc3071cd982d57189e3ad2b 642 Gene3D G3DSA:2.60.120.200 527 641 2.7E-8 T 14-10-2018 AMIS_50310 c202f39ccdc3071cd982d57189e3ad2b 642 SUPERFAMILY SSF49899 533 639 1.39E-9 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily AMIS_50310 c202f39ccdc3071cd982d57189e3ad2b 642 SUPERFAMILY SSF50998 64 361 6.08E-17 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AMIS_50310 c202f39ccdc3071cd982d57189e3ad2b 642 Gene3D G3DSA:2.130.10.10 43 388 1.7E-11 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_50310 c202f39ccdc3071cd982d57189e3ad2b 642 Pfam PF02210 Laminin G domain 561 639 2.4E-7 T 14-10-2018 IPR001791 Laminin G domain AMIS_28140 6d0fb4b11f1015a631927490bf109219 1165 SUPERFAMILY SSF51445 395 597 7.52E-19 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_28140 6d0fb4b11f1015a631927490bf109219 1165 Gene3D G3DSA:3.20.20.80 388 625 2.3E-18 T 14-10-2018 AMIS_28140 6d0fb4b11f1015a631927490bf109219 1165 SUPERFAMILY SSF49785 750 881 1.35E-8 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_28140 6d0fb4b11f1015a631927490bf109219 1165 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 81 238 4.8E-21 T 14-10-2018 AMIS_28140 6d0fb4b11f1015a631927490bf109219 1165 Gene3D G3DSA:2.60.120.260 745 896 3.3E-23 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_28140 6d0fb4b11f1015a631927490bf109219 1165 Gene3D G3DSA:2.60.120.260 1001 1161 7.0E-33 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_28140 6d0fb4b11f1015a631927490bf109219 1165 SUPERFAMILY SSF49899 27 241 1.39E-27 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily AMIS_28140 6d0fb4b11f1015a631927490bf109219 1165 Gene3D G3DSA:2.60.120.200 28 242 7.6E-25 T 14-10-2018 AMIS_28140 6d0fb4b11f1015a631927490bf109219 1165 Pfam PF07532 Bacterial Ig-like domain (group 4) 258 310 1.3E-10 T 14-10-2018 IPR011081 Bacterial Ig-related AMIS_28140 6d0fb4b11f1015a631927490bf109219 1165 SUPERFAMILY SSF49785 1004 1131 5.95E-9 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_77110 122f1a1d6ed733e106d42ed2227cc8b6 942 Gene3D G3DSA:2.60.120.260 430 590 1.6E-17 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_77110 122f1a1d6ed733e106d42ed2227cc8b6 942 SMART SM00382 665 844 1.4E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_77110 122f1a1d6ed733e106d42ed2227cc8b6 942 SUPERFAMILY SSF49785 408 586 4.46E-19 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_77110 122f1a1d6ed733e106d42ed2227cc8b6 942 Pfam PF00005 ABC transporter 657 796 1.0E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_77110 122f1a1d6ed733e106d42ed2227cc8b6 942 ProSitePatterns PS00211 ABC transporters family signature. 769 783 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_77110 122f1a1d6ed733e106d42ed2227cc8b6 942 Pfam PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain 467 578 4.9E-12 T 14-10-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 AMIS_77110 122f1a1d6ed733e106d42ed2227cc8b6 942 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 66 319 1.6E-21 T 14-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 AMIS_77110 122f1a1d6ed733e106d42ed2227cc8b6 942 SUPERFAMILY SSF52540 640 859 1.15E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_77110 122f1a1d6ed733e106d42ed2227cc8b6 942 Gene3D G3DSA:3.40.50.300 630 866 5.8E-57 T 14-10-2018 AMIS_77110 122f1a1d6ed733e106d42ed2227cc8b6 942 SUPERFAMILY SSF53474 66 378 1.09E-49 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_77110 122f1a1d6ed733e106d42ed2227cc8b6 942 SMART SM00939 365 583 8.0E-8 T 14-10-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 AMIS_27140 678e65f8faac15be5b33954d8138f4f3 292 Gene3D G3DSA:3.10.129.10 168 289 6.9E-37 T 14-10-2018 AMIS_27140 678e65f8faac15be5b33954d8138f4f3 292 SUPERFAMILY SSF54637 169 276 2.93E-27 T 14-10-2018 IPR029069 HotDog domain superfamily AMIS_27140 678e65f8faac15be5b33954d8138f4f3 292 Pfam PF01575 MaoC like domain 169 271 5.8E-26 T 14-10-2018 IPR002539 MaoC-like dehydratase domain AMIS_27140 678e65f8faac15be5b33954d8138f4f3 292 Gene3D G3DSA:3.10.129.10 4 165 1.5E-35 T 14-10-2018 AMIS_27140 678e65f8faac15be5b33954d8138f4f3 292 SUPERFAMILY SSF54637 8 163 2.31E-26 T 14-10-2018 IPR029069 HotDog domain superfamily AMIS_27140 678e65f8faac15be5b33954d8138f4f3 292 Pfam PF13452 N-terminal half of MaoC dehydratase 7 130 3.1E-8 T 14-10-2018 IPR039569 N-terminal of MaoC-like dehydratase Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241|Reactome: R-HSA-9033500 AMIS_40710 e3713b0ddb7d2d8ed9b6965123d83347 510 SUPERFAMILY SSF47384 272 351 2.35E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_40710 e3713b0ddb7d2d8ed9b6965123d83347 510 SUPERFAMILY SSF55874 341 507 1.7E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_40710 e3713b0ddb7d2d8ed9b6965123d83347 510 Pfam PF08448 PAS fold 157 272 3.7E-8 T 14-10-2018 IPR013656 PAS fold-4 AMIS_40710 e3713b0ddb7d2d8ed9b6965123d83347 510 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 396 506 5.9E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_40710 e3713b0ddb7d2d8ed9b6965123d83347 510 Gene3D G3DSA:3.30.450.20 148 274 2.5E-12 T 14-10-2018 AMIS_40710 e3713b0ddb7d2d8ed9b6965123d83347 510 SMART SM00388 283 351 2.1E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_40710 e3713b0ddb7d2d8ed9b6965123d83347 510 SUPERFAMILY SSF55785 141 268 7.85E-13 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_40710 e3713b0ddb7d2d8ed9b6965123d83347 510 SMART SM00065 1 150 0.0056 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_40710 e3713b0ddb7d2d8ed9b6965123d83347 510 SUPERFAMILY SSF55781 5 146 1.42E-17 T 14-10-2018 AMIS_40710 e3713b0ddb7d2d8ed9b6965123d83347 510 Pfam PF13185 GAF domain 4 127 2.0E-9 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_40710 e3713b0ddb7d2d8ed9b6965123d83347 510 Gene3D G3DSA:1.10.287.130 275 354 9.7E-15 T 14-10-2018 AMIS_40710 e3713b0ddb7d2d8ed9b6965123d83347 510 Gene3D G3DSA:3.30.450.40 2 147 2.4E-17 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_40710 e3713b0ddb7d2d8ed9b6965123d83347 510 SMART SM00086 228 270 0.0025 T 14-10-2018 IPR001610 PAC motif AMIS_40710 e3713b0ddb7d2d8ed9b6965123d83347 510 Pfam PF00512 His Kinase A (phospho-acceptor) domain 284 351 5.0E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_40710 e3713b0ddb7d2d8ed9b6965123d83347 510 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 275 8.6E-10 T 14-10-2018 IPR000014 PAS domain AMIS_40710 e3713b0ddb7d2d8ed9b6965123d83347 510 PRINTS PR00344 Bacterial sensor protein C-terminal signature 468 486 8.3E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_40710 e3713b0ddb7d2d8ed9b6965123d83347 510 PRINTS PR00344 Bacterial sensor protein C-terminal signature 433 447 8.3E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_40710 e3713b0ddb7d2d8ed9b6965123d83347 510 PRINTS PR00344 Bacterial sensor protein C-terminal signature 451 461 8.3E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_40710 e3713b0ddb7d2d8ed9b6965123d83347 510 PRINTS PR00344 Bacterial sensor protein C-terminal signature 493 506 8.3E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_40710 e3713b0ddb7d2d8ed9b6965123d83347 510 SMART SM00387 396 509 6.6E-34 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_40710 e3713b0ddb7d2d8ed9b6965123d83347 510 Gene3D G3DSA:3.30.565.10 355 508 4.1E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_61330 139bff3c288b4db82af95133ae4fee5f 137 SUPERFAMILY SSF54631 1 125 2.27E-34 T 14-10-2018 AMIS_61330 139bff3c288b4db82af95133ae4fee5f 137 Gene3D G3DSA:3.10.580.10 1 126 3.2E-42 T 14-10-2018 AMIS_61330 139bff3c288b4db82af95133ae4fee5f 137 SMART SM00116 77 124 1.4E-11 T 14-10-2018 IPR000644 CBS domain AMIS_61330 139bff3c288b4db82af95133ae4fee5f 137 SMART SM00116 11 59 8.6E-8 T 14-10-2018 IPR000644 CBS domain AMIS_61330 139bff3c288b4db82af95133ae4fee5f 137 Pfam PF00571 CBS domain 77 124 1.0E-10 T 14-10-2018 IPR000644 CBS domain AMIS_61330 139bff3c288b4db82af95133ae4fee5f 137 Pfam PF00571 CBS domain 4 55 4.2E-13 T 14-10-2018 IPR000644 CBS domain AMIS_32870 5fad511e156614a6a40f2991905127ba 444 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 384 393 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 AMIS_32870 5fad511e156614a6a40f2991905127ba 444 PRINTS PR00465 E-class P450 group IV signature 247 273 1.3E-17 T 14-10-2018 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_32870 5fad511e156614a6a40f2991905127ba 444 PRINTS PR00465 E-class P450 group IV signature 32 55 1.3E-17 T 14-10-2018 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_32870 5fad511e156614a6a40f2991905127ba 444 PRINTS PR00465 E-class P450 group IV signature 391 409 1.3E-17 T 14-10-2018 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_32870 5fad511e156614a6a40f2991905127ba 444 PRINTS PR00465 E-class P450 group IV signature 375 391 1.3E-17 T 14-10-2018 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_32870 5fad511e156614a6a40f2991905127ba 444 PRINTS PR00465 E-class P450 group IV signature 350 368 1.3E-17 T 14-10-2018 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_32870 5fad511e156614a6a40f2991905127ba 444 PRINTS PR00465 E-class P450 group IV signature 301 317 1.3E-17 T 14-10-2018 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_32870 5fad511e156614a6a40f2991905127ba 444 SUPERFAMILY SSF48264 15 439 1.31E-91 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_32870 5fad511e156614a6a40f2991905127ba 444 Pfam PF00067 Cytochrome P450 16 419 1.6E-59 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_32870 5fad511e156614a6a40f2991905127ba 444 Gene3D G3DSA:1.10.630.10 4 442 4.2E-97 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_30110 cbec24a5ffd5e0713893f0076881dd1e 132 SUPERFAMILY SSF46955 6 120 8.42E-28 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily AMIS_30110 cbec24a5ffd5e0713893f0076881dd1e 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 7 18 4.4E-10 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_30110 cbec24a5ffd5e0713893f0076881dd1e 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 42 62 4.4E-10 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_30110 cbec24a5ffd5e0713893f0076881dd1e 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 18 31 4.4E-10 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_30110 cbec24a5ffd5e0713893f0076881dd1e 132 Gene3D G3DSA:1.10.1660.10 2 130 2.8E-29 T 14-10-2018 AMIS_30110 cbec24a5ffd5e0713893f0076881dd1e 132 ProSitePatterns PS00552 MerR-type HTH domain signature. 9 31 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_30110 cbec24a5ffd5e0713893f0076881dd1e 132 SMART SM00422 6 75 9.9E-32 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_30110 cbec24a5ffd5e0713893f0076881dd1e 132 Pfam PF13411 MerR HTH family regulatory protein 6 72 1.8E-18 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_22930 512c12bf42afb905ca5d0aa864be12f1 333 Gene3D G3DSA:3.40.50.2300 165 290 6.9E-70 T 14-10-2018 AMIS_22930 512c12bf42afb905ca5d0aa864be12f1 333 Pfam PF13377 Periplasmic binding protein-like domain 173 328 3.2E-37 T 14-10-2018 AMIS_22930 512c12bf42afb905ca5d0aa864be12f1 333 ProSitePatterns PS00356 LacI-type HTH domain signature. 11 29 - T 14-10-2018 AMIS_22930 512c12bf42afb905ca5d0aa864be12f1 333 Gene3D G3DSA:3.40.50.2300 62 307 6.9E-70 T 14-10-2018 AMIS_22930 512c12bf42afb905ca5d0aa864be12f1 333 SUPERFAMILY SSF47413 8 66 5.63E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_22930 512c12bf42afb905ca5d0aa864be12f1 333 SMART SM00354 8 78 4.9E-30 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_22930 512c12bf42afb905ca5d0aa864be12f1 333 Pfam PF00356 Bacterial regulatory proteins, lacI family 10 55 2.8E-17 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_22930 512c12bf42afb905ca5d0aa864be12f1 333 SUPERFAMILY SSF53822 69 331 3.53E-62 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_22930 512c12bf42afb905ca5d0aa864be12f1 333 Gene3D G3DSA:1.10.260.40 3 61 2.3E-23 T 14-10-2018 AMIS_34860 0bd4a205d8803fb40168679af29da47c 144 SUPERFAMILY SSF55729 7 136 1.83E-24 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_34860 0bd4a205d8803fb40168679af29da47c 144 Pfam PF00583 Acetyltransferase (GNAT) family 30 130 1.5E-15 T 14-10-2018 IPR000182 GNAT domain AMIS_34860 0bd4a205d8803fb40168679af29da47c 144 Gene3D G3DSA:3.40.630.30 7 140 1.1E-29 T 14-10-2018 AMIS_46270 32c849e78b6277b16f657cc2d9298411 438 SUPERFAMILY SSF55424 326 436 9.54E-20 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AMIS_46270 32c849e78b6277b16f657cc2d9298411 438 Gene3D G3DSA:3.50.50.60 143 263 9.9E-85 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_46270 32c849e78b6277b16f657cc2d9298411 438 SUPERFAMILY SSF51905 1 320 1.5E-46 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_46270 32c849e78b6277b16f657cc2d9298411 438 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 310 2.0E-48 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMIS_46270 32c849e78b6277b16f657cc2d9298411 438 Gene3D G3DSA:3.30.390.30 329 438 2.2E-19 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AMIS_46270 32c849e78b6277b16f657cc2d9298411 438 PIRSF PIRSF000350 1 438 3.7E-74 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 AMIS_46270 32c849e78b6277b16f657cc2d9298411 438 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 330 431 7.5E-13 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AMIS_46270 32c849e78b6277b16f657cc2d9298411 438 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 249 265 4.5E-17 T 14-10-2018 AMIS_46270 32c849e78b6277b16f657cc2d9298411 438 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 4.5E-17 T 14-10-2018 AMIS_46270 32c849e78b6277b16f657cc2d9298411 438 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 125 143 4.5E-17 T 14-10-2018 AMIS_46270 32c849e78b6277b16f657cc2d9298411 438 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 165 183 4.5E-17 T 14-10-2018 AMIS_46270 32c849e78b6277b16f657cc2d9298411 438 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 276 298 4.5E-17 T 14-10-2018 AMIS_46270 32c849e78b6277b16f657cc2d9298411 438 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 250 264 3.7E-49 T 14-10-2018 AMIS_46270 32c849e78b6277b16f657cc2d9298411 438 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 385 400 3.7E-49 T 14-10-2018 AMIS_46270 32c849e78b6277b16f657cc2d9298411 438 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 165 190 3.7E-49 T 14-10-2018 AMIS_46270 32c849e78b6277b16f657cc2d9298411 438 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 427 3.7E-49 T 14-10-2018 AMIS_46270 32c849e78b6277b16f657cc2d9298411 438 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 326 347 3.7E-49 T 14-10-2018 AMIS_46270 32c849e78b6277b16f657cc2d9298411 438 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 3.7E-49 T 14-10-2018 AMIS_46270 32c849e78b6277b16f657cc2d9298411 438 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 37 52 3.7E-49 T 14-10-2018 AMIS_46270 32c849e78b6277b16f657cc2d9298411 438 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 291 298 3.7E-49 T 14-10-2018 AMIS_46270 32c849e78b6277b16f657cc2d9298411 438 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 128 137 3.7E-49 T 14-10-2018 AMIS_46270 32c849e78b6277b16f657cc2d9298411 438 Gene3D G3DSA:3.50.50.60 4 318 9.9E-85 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_14280 825bbd261018c814edbdc2cbdf4fe021 589 Pfam PF13328 HD domain 61 206 8.3E-40 T 14-10-2018 IPR003607 HD/PDEase domain AMIS_14280 825bbd261018c814edbdc2cbdf4fe021 589 SUPERFAMILY SSF81301 223 392 5.07E-35 T 14-10-2018 AMIS_14280 825bbd261018c814edbdc2cbdf4fe021 589 SUPERFAMILY SSF81271 418 472 1.5E-11 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AMIS_14280 825bbd261018c814edbdc2cbdf4fe021 589 Gene3D G3DSA:1.10.3210.10 33 222 3.9E-66 T 14-10-2018 AMIS_14280 825bbd261018c814edbdc2cbdf4fe021 589 SMART SM00954 265 374 6.8E-34 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 AMIS_14280 825bbd261018c814edbdc2cbdf4fe021 589 Pfam PF02824 TGS domain 419 472 8.5E-15 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 AMIS_14280 825bbd261018c814edbdc2cbdf4fe021 589 Pfam PF04607 Region found in RelA / SpoT proteins 290 372 2.5E-17 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 AMIS_14280 825bbd261018c814edbdc2cbdf4fe021 589 Gene3D G3DSA:3.30.460.10 224 354 9.0E-31 T 14-10-2018 AMIS_14280 825bbd261018c814edbdc2cbdf4fe021 589 SMART SM00471 74 184 4.1E-13 T 14-10-2018 IPR003607 HD/PDEase domain AMIS_14280 825bbd261018c814edbdc2cbdf4fe021 589 SUPERFAMILY SSF109604 40 221 1.88E-59 T 14-10-2018 AMIS_14280 825bbd261018c814edbdc2cbdf4fe021 589 Gene3D G3DSA:3.10.20.30 408 478 1.1E-17 T 14-10-2018 IPR012675 Beta-grasp domain superfamily AMIS_12340 05b53030fa6304fa941e77d1a3503ab6 394 Gene3D G3DSA:3.30.360.10 139 387 1.0E-76 T 14-10-2018 AMIS_12340 05b53030fa6304fa941e77d1a3503ab6 394 SUPERFAMILY SSF55347 140 318 8.99E-35 T 14-10-2018 AMIS_12340 05b53030fa6304fa941e77d1a3503ab6 394 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 125 1.0E-24 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AMIS_12340 05b53030fa6304fa941e77d1a3503ab6 394 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 146 218 1.5E-9 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 AMIS_12340 05b53030fa6304fa941e77d1a3503ab6 394 Gene3D G3DSA:3.40.50.720 3 138 8.3E-42 T 14-10-2018 AMIS_12340 05b53030fa6304fa941e77d1a3503ab6 394 SUPERFAMILY SSF51735 4 166 3.51E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_35170 0032c1adfb2d49d4f7f8353d6489604f 296 SUPERFAMILY SSF53850 89 295 1.99E-26 T 14-10-2018 AMIS_35170 0032c1adfb2d49d4f7f8353d6489604f 296 Gene3D G3DSA:3.40.190.10 92 279 7.0E-33 T 14-10-2018 AMIS_35170 0032c1adfb2d49d4f7f8353d6489604f 296 SUPERFAMILY SSF46785 1 111 2.89E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_35170 0032c1adfb2d49d4f7f8353d6489604f 296 Gene3D G3DSA:1.10.10.10 1 90 8.1E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_35170 0032c1adfb2d49d4f7f8353d6489604f 296 Pfam PF03466 LysR substrate binding domain 88 295 1.6E-28 T 14-10-2018 IPR005119 LysR, substrate-binding AMIS_35170 0032c1adfb2d49d4f7f8353d6489604f 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 3.4E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_35170 0032c1adfb2d49d4f7f8353d6489604f 296 Gene3D G3DSA:3.40.190.10 170 270 7.0E-33 T 14-10-2018 AMIS_27270 ca0e0ba771aef61acf13ba4712af102d 291 Pfam PF00106 short chain dehydrogenase 12 210 1.6E-48 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_27270 ca0e0ba771aef61acf13ba4712af102d 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 193 210 8.2E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_27270 ca0e0ba771aef61acf13ba4712af102d 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 162 8.2E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_27270 ca0e0ba771aef61acf13ba4712af102d 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 191 8.2E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_27270 ca0e0ba771aef61acf13ba4712af102d 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 99 110 8.2E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_27270 ca0e0ba771aef61acf13ba4712af102d 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 8.2E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_27270 ca0e0ba771aef61acf13ba4712af102d 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 240 260 8.2E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_27270 ca0e0ba771aef61acf13ba4712af102d 291 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 159 187 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMIS_27270 ca0e0ba771aef61acf13ba4712af102d 291 TIGRFAM TIGR03971 SDR_subfam_1: SDR family mycofactocin-dependent oxidoreductase 9 277 9.0E-99 T 14-10-2018 IPR023985 Mycofactocin-dependent oxidoreductase AMIS_27270 ca0e0ba771aef61acf13ba4712af102d 291 Gene3D G3DSA:3.40.50.720 1 277 8.5E-73 T 14-10-2018 AMIS_27270 ca0e0ba771aef61acf13ba4712af102d 291 SUPERFAMILY SSF51735 6 278 1.62E-67 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_27270 ca0e0ba771aef61acf13ba4712af102d 291 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 172 191 1.9E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_27270 ca0e0ba771aef61acf13ba4712af102d 291 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 99 110 1.9E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_27270 ca0e0ba771aef61acf13ba4712af102d 291 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 160 1.9E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_31540 26f24621a39b956cd83e4a23bf44518a 265 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 158 186 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMIS_31540 26f24621a39b956cd83e4a23bf44518a 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 161 2.2E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_31540 26f24621a39b956cd83e4a23bf44518a 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 23 40 2.2E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_31540 26f24621a39b956cd83e4a23bf44518a 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 97 108 2.2E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_31540 26f24621a39b956cd83e4a23bf44518a 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 190 2.2E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_31540 26f24621a39b956cd83e4a23bf44518a 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 192 209 2.2E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_31540 26f24621a39b956cd83e4a23bf44518a 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 225 245 2.2E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_31540 26f24621a39b956cd83e4a23bf44518a 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 159 9.0E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_31540 26f24621a39b956cd83e4a23bf44518a 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 97 108 9.0E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_31540 26f24621a39b956cd83e4a23bf44518a 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 171 190 9.0E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_31540 26f24621a39b956cd83e4a23bf44518a 265 SUPERFAMILY SSF51735 20 263 7.44E-77 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_31540 26f24621a39b956cd83e4a23bf44518a 265 Gene3D G3DSA:3.40.50.720 9 263 6.5E-82 T 14-10-2018 AMIS_31540 26f24621a39b956cd83e4a23bf44518a 265 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 22 202 0.0011 T 14-10-2018 AMIS_31540 26f24621a39b956cd83e4a23bf44518a 265 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 28 262 4.4E-60 T 14-10-2018 AMIS_56660 2b8f2c7ca5bb5d432de19928bc0deb75 532 PRINTS PR01036 Tetracycline resistance protein TetB signature 406 425 1.4E-9 T 14-10-2018 AMIS_56660 2b8f2c7ca5bb5d432de19928bc0deb75 532 PRINTS PR01036 Tetracycline resistance protein TetB signature 144 168 1.4E-9 T 14-10-2018 AMIS_56660 2b8f2c7ca5bb5d432de19928bc0deb75 532 PRINTS PR01036 Tetracycline resistance protein TetB signature 20 44 1.4E-9 T 14-10-2018 AMIS_56660 2b8f2c7ca5bb5d432de19928bc0deb75 532 PRINTS PR01036 Tetracycline resistance protein TetB signature 114 134 1.4E-9 T 14-10-2018 AMIS_56660 2b8f2c7ca5bb5d432de19928bc0deb75 532 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 18 495 1.3E-82 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 AMIS_56660 2b8f2c7ca5bb5d432de19928bc0deb75 532 Gene3D G3DSA:1.20.1250.20 245 507 6.4E-18 T 14-10-2018 AMIS_56660 2b8f2c7ca5bb5d432de19928bc0deb75 532 Pfam PF07690 Major Facilitator Superfamily 22 415 1.5E-54 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_56660 2b8f2c7ca5bb5d432de19928bc0deb75 532 Gene3D G3DSA:1.20.1720.10 17 228 4.7E-47 T 14-10-2018 AMIS_56660 2b8f2c7ca5bb5d432de19928bc0deb75 532 ProSitePatterns PS00216 Sugar transport proteins signature 1. 74 90 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AMIS_56660 2b8f2c7ca5bb5d432de19928bc0deb75 532 SUPERFAMILY SSF103473 7 506 2.35E-70 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_60090 4ddeb16dbf02954f0819a0224839e9ff 812 Gene3D G3DSA:1.10.3810.10 72 283 1.0E-67 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMIS_60090 4ddeb16dbf02954f0819a0224839e9ff 812 Pfam PF00905 Penicillin binding protein transpeptidase domain 430 658 3.0E-18 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AMIS_60090 4ddeb16dbf02954f0819a0224839e9ff 812 Gene3D G3DSA:3.30.10.20 726 787 2.0E-13 T 14-10-2018 AMIS_60090 4ddeb16dbf02954f0819a0224839e9ff 812 Gene3D G3DSA:3.40.710.10 318 723 2.3E-60 T 14-10-2018 AMIS_60090 4ddeb16dbf02954f0819a0224839e9ff 812 SUPERFAMILY SSF56601 252 724 1.07E-59 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMIS_60090 4ddeb16dbf02954f0819a0224839e9ff 812 SUPERFAMILY SSF53955 66 292 9.56E-65 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily AMIS_60090 4ddeb16dbf02954f0819a0224839e9ff 812 Pfam PF00912 Transglycosylase 80 263 1.3E-57 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMIS_48800 d628b808d1594eb3133bbb561c9c38f2 193 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 9 192 3.2E-49 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AMIS_48800 d628b808d1594eb3133bbb561c9c38f2 193 Gene3D G3DSA:3.40.50.1240 2 192 2.0E-56 T 14-10-2018 IPR029033 Histidine phosphatase superfamily AMIS_48800 d628b808d1594eb3133bbb561c9c38f2 193 SMART SM00855 8 153 2.7E-19 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AMIS_48800 d628b808d1594eb3133bbb561c9c38f2 193 PIRSF PIRSF000709 4 182 3.1E-9 T 14-10-2018 AMIS_48800 d628b808d1594eb3133bbb561c9c38f2 193 SUPERFAMILY SSF53254 6 184 1.96E-49 T 14-10-2018 IPR029033 Histidine phosphatase superfamily AMIS_56220 8dc9afedd88e816bdf56f75a72390cb1 527 SUPERFAMILY SSF58104 232 525 1.31E-59 T 14-10-2018 AMIS_56220 8dc9afedd88e816bdf56f75a72390cb1 527 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 333 498 4.0E-31 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_56220 8dc9afedd88e816bdf56f75a72390cb1 527 SMART SM00283 272 526 4.2E-44 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_56220 8dc9afedd88e816bdf56f75a72390cb1 527 Gene3D G3DSA:1.10.287.950 212 527 1.3E-57 T 14-10-2018 AMIS_43170 7f7e46421b74a272410dfc58b528ea9a 254 Gene3D G3DSA:3.40.50.720 4 254 4.0E-72 T 14-10-2018 AMIS_43170 7f7e46421b74a272410dfc58b528ea9a 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 147 175 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMIS_43170 7f7e46421b74a272410dfc58b528ea9a 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 2.1E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_43170 7f7e46421b74a272410dfc58b528ea9a 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 2.1E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_43170 7f7e46421b74a272410dfc58b528ea9a 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 2.1E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_43170 7f7e46421b74a272410dfc58b528ea9a 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 2.1E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_43170 7f7e46421b74a272410dfc58b528ea9a 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 2.1E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_43170 7f7e46421b74a272410dfc58b528ea9a 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.1E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_43170 7f7e46421b74a272410dfc58b528ea9a 254 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 196 0.0061 T 14-10-2018 AMIS_43170 7f7e46421b74a272410dfc58b528ea9a 254 SUPERFAMILY SSF51735 6 249 1.8E-59 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_43170 7f7e46421b74a272410dfc58b528ea9a 254 Pfam PF00106 short chain dehydrogenase 8 203 2.7E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_43170 7f7e46421b74a272410dfc58b528ea9a 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 4.3E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_43170 7f7e46421b74a272410dfc58b528ea9a 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 4.3E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_43170 7f7e46421b74a272410dfc58b528ea9a 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 4.3E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_46740 73e550ce4125f0beb4548c28715a9590 393 Pfam PF01571 Aminomethyltransferase folate-binding domain 22 284 1.9E-81 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain AMIS_46740 73e550ce4125f0beb4548c28715a9590 393 SUPERFAMILY SSF101790 301 390 1.39E-23 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal AMIS_46740 73e550ce4125f0beb4548c28715a9590 393 SUPERFAMILY SSF103025 16 307 9.89E-87 T 14-10-2018 AMIS_46740 73e550ce4125f0beb4548c28715a9590 393 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 18 390 1.4E-98 T 14-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 AMIS_46740 73e550ce4125f0beb4548c28715a9590 393 PIRSF PIRSF006487 6 393 4.3E-88 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 AMIS_46740 73e550ce4125f0beb4548c28715a9590 393 Gene3D G3DSA:3.30.1360.120 10 388 3.4E-122 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 AMIS_46740 73e550ce4125f0beb4548c28715a9590 393 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 292 384 3.5E-21 T 14-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AMIS_46740 73e550ce4125f0beb4548c28715a9590 393 Hamap MF_00259 Aminomethyltransferase [gcvT]. 16 390 39.251 T 14-10-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AMIS_12960 d58e22ddd1138d1017b52f07bc0246b9 314 Gene3D G3DSA:3.40.1190.20 9 306 3.4E-48 T 14-10-2018 IPR029056 Ribokinase-like AMIS_12960 d58e22ddd1138d1017b52f07bc0246b9 314 SUPERFAMILY SSF53613 28 298 9.51E-38 T 14-10-2018 IPR029056 Ribokinase-like AMIS_12960 d58e22ddd1138d1017b52f07bc0246b9 314 Pfam PF00294 pfkB family carbohydrate kinase 23 292 2.4E-28 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB AMIS_12960 d58e22ddd1138d1017b52f07bc0246b9 314 PIRSF PIRSF000535 14 310 9.5E-34 T 14-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 AMIS_80210 9b79b6f8584273e3268c1bcbcb394a1c 286 SUPERFAMILY SSF81624 2 143 3.53E-19 T 14-10-2018 IPR035937 MutM-like, N-terminal AMIS_80210 9b79b6f8584273e3268c1bcbcb394a1c 286 Gene3D G3DSA:1.10.8.50 140 271 6.2E-32 T 14-10-2018 AMIS_80210 9b79b6f8584273e3268c1bcbcb394a1c 286 SUPERFAMILY SSF46946 137 218 9.16E-21 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 AMIS_80210 9b79b6f8584273e3268c1bcbcb394a1c 286 Gene3D G3DSA:3.20.190.10 2 121 2.3E-12 T 14-10-2018 IPR035937 MutM-like, N-terminal AMIS_80210 9b79b6f8584273e3268c1bcbcb394a1c 286 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 2 87 1.6E-11 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AMIS_80210 9b79b6f8584273e3268c1bcbcb394a1c 286 SMART SM01232 138 228 3.3E-21 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AMIS_80210 9b79b6f8584273e3268c1bcbcb394a1c 286 SMART SM00898 2 124 1.0E-17 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AMIS_80210 9b79b6f8584273e3268c1bcbcb394a1c 286 SUPERFAMILY SSF57716 227 271 1.85E-10 T 14-10-2018 AMIS_80210 9b79b6f8584273e3268c1bcbcb394a1c 286 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 138 219 6.6E-14 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AMIS_80210 9b79b6f8584273e3268c1bcbcb394a1c 286 Pfam PF06827 Zinc finger found in FPG and IleRS 243 270 2.8E-7 T 14-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 AMIS_9500 3f0a1b8373f35fd6c7b6bb03202292d9 511 Pfam PF00221 Aromatic amino acid lyase 11 470 9.4E-182 T 14-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 AMIS_9500 3f0a1b8373f35fd6c7b6bb03202292d9 511 Gene3D G3DSA:1.10.275.10 2 197 2.3E-69 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal AMIS_9500 3f0a1b8373f35fd6c7b6bb03202292d9 511 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 138 153 - T 14-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 AMIS_9500 3f0a1b8373f35fd6c7b6bb03202292d9 511 SUPERFAMILY SSF48557 3 497 3.06E-175 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 AMIS_9500 3f0a1b8373f35fd6c7b6bb03202292d9 511 Gene3D G3DSA:1.20.200.10 198 508 2.3E-103 T 14-10-2018 AMIS_9500 3f0a1b8373f35fd6c7b6bb03202292d9 511 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 3 506 7.6E-189 T 14-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AMIS_24660 c9536a50cfdbde3256107ddc477cfd2e 254 SUPERFAMILY SSF50182 124 190 1.54E-6 T 14-10-2018 IPR010920 LSM domain superfamily AMIS_24660 c9536a50cfdbde3256107ddc477cfd2e 254 Pfam PF00924 Mechanosensitive ion channel 83 190 9.1E-15 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AMIS_37680 737e262cd597cba6950a2f2595ba77ec 706 Gene3D G3DSA:3.30.450.20 173 295 1.1E-11 T 14-10-2018 AMIS_37680 737e262cd597cba6950a2f2595ba77ec 706 Pfam PF00512 His Kinase A (phospho-acceptor) domain 481 547 2.6E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_37680 737e262cd597cba6950a2f2595ba77ec 706 SMART SM00065 319 475 2.5E-9 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_37680 737e262cd597cba6950a2f2595ba77ec 706 SMART SM00065 27 174 0.0092 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_37680 737e262cd597cba6950a2f2595ba77ec 706 Pfam PF08448 PAS fold 183 299 2.1E-8 T 14-10-2018 IPR013656 PAS fold-4 AMIS_37680 737e262cd597cba6950a2f2595ba77ec 706 Pfam PF13185 GAF domain 322 462 2.3E-13 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_37680 737e262cd597cba6950a2f2595ba77ec 706 SUPERFAMILY SSF55785 176 291 2.27E-10 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_37680 737e262cd597cba6950a2f2595ba77ec 706 SMART SM00388 480 547 6.3E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_37680 737e262cd597cba6950a2f2595ba77ec 706 Gene3D G3DSA:1.10.287.130 476 551 1.1E-14 T 14-10-2018 AMIS_37680 737e262cd597cba6950a2f2595ba77ec 706 SUPERFAMILY SSF55781 322 478 2.13E-18 T 14-10-2018 AMIS_37680 737e262cd597cba6950a2f2595ba77ec 706 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 591 700 1.9E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_37680 737e262cd597cba6950a2f2595ba77ec 706 Pfam PF01590 GAF domain 33 161 6.0E-8 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_37680 737e262cd597cba6950a2f2595ba77ec 706 SUPERFAMILY SSF55781 33 162 4.58E-18 T 14-10-2018 AMIS_37680 737e262cd597cba6950a2f2595ba77ec 706 SUPERFAMILY SSF47384 468 548 2.75E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_37680 737e262cd597cba6950a2f2595ba77ec 706 Gene3D G3DSA:3.30.565.10 552 700 6.7E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_37680 737e262cd597cba6950a2f2595ba77ec 706 SUPERFAMILY SSF55874 537 701 1.96E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_37680 737e262cd597cba6950a2f2595ba77ec 706 PRINTS PR00344 Bacterial sensor protein C-terminal signature 645 655 7.7E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_37680 737e262cd597cba6950a2f2595ba77ec 706 PRINTS PR00344 Bacterial sensor protein C-terminal signature 662 680 7.7E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_37680 737e262cd597cba6950a2f2595ba77ec 706 PRINTS PR00344 Bacterial sensor protein C-terminal signature 627 641 7.7E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_37680 737e262cd597cba6950a2f2595ba77ec 706 PRINTS PR00344 Bacterial sensor protein C-terminal signature 686 699 7.7E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_37680 737e262cd597cba6950a2f2595ba77ec 706 Gene3D G3DSA:3.30.450.40 296 475 1.4E-21 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_37680 737e262cd597cba6950a2f2595ba77ec 706 Gene3D G3DSA:3.30.450.40 13 165 3.7E-17 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_37680 737e262cd597cba6950a2f2595ba77ec 706 SMART SM00387 590 702 3.0E-34 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_48350 1a377ea8a0225a485cf3f3d37faf64fe 738 Pfam PF02018 Carbohydrate binding domain 33 154 1.6E-16 T 14-10-2018 IPR003305 Carbohydrate-binding, CenC-like GO:0016798 AMIS_48350 1a377ea8a0225a485cf3f3d37faf64fe 738 Gene3D G3DSA:2.60.40.10 181 270 2.1E-23 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_48350 1a377ea8a0225a485cf3f3d37faf64fe 738 SUPERFAMILY SSF49785 31 169 1.45E-31 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_48350 1a377ea8a0225a485cf3f3d37faf64fe 738 ProSitePatterns PS00698 Glycosyl hydrolases family 9 active sites signature 2. 707 725 - T 14-10-2018 IPR033126 Glycosyl hydrolases family 9, Asp/Glu active sites KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AMIS_48350 1a377ea8a0225a485cf3f3d37faf64fe 738 Gene3D G3DSA:2.60.120.260 27 170 2.9E-30 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_48350 1a377ea8a0225a485cf3f3d37faf64fe 738 SUPERFAMILY SSF81296 182 270 3.36E-23 T 14-10-2018 IPR014756 Immunoglobulin E-set AMIS_48350 1a377ea8a0225a485cf3f3d37faf64fe 738 Gene3D G3DSA:1.50.10.10 272 738 3.8E-176 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 AMIS_48350 1a377ea8a0225a485cf3f3d37faf64fe 738 Pfam PF02927 Cellulase N-terminal ig-like domain 181 263 3.8E-25 T 14-10-2018 IPR004197 Cellulase, Ig-like domain GO:0005975|GO:0008810 AMIS_48350 1a377ea8a0225a485cf3f3d37faf64fe 738 SUPERFAMILY SSF48208 273 735 3.27E-120 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AMIS_48350 1a377ea8a0225a485cf3f3d37faf64fe 738 Pfam PF00759 Glycosyl hydrolase family 9 274 730 6.0E-99 T 14-10-2018 IPR001701 Glycoside hydrolase family 9 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AMIS_14580 31eba51b8f3e7048928ac869a49a767a 342 ProSitePatterns PS00433 Phosphofructokinase signature. 265 283 - T 14-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AMIS_14580 31eba51b8f3e7048928ac869a49a767a 342 Gene3D G3DSA:3.40.50.460 140 277 4.0E-113 T 14-10-2018 AMIS_14580 31eba51b8f3e7048928ac869a49a767a 342 PIRSF PIRSF000532 1 339 2.4E-122 T 14-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 AMIS_14580 31eba51b8f3e7048928ac869a49a767a 342 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 158 174 4.2E-73 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AMIS_14580 31eba51b8f3e7048928ac869a49a767a 342 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 138 156 4.2E-73 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AMIS_14580 31eba51b8f3e7048928ac869a49a767a 342 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 176 193 4.2E-73 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AMIS_14580 31eba51b8f3e7048928ac869a49a767a 342 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 211 223 4.2E-73 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AMIS_14580 31eba51b8f3e7048928ac869a49a767a 342 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 120 137 4.2E-73 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AMIS_14580 31eba51b8f3e7048928ac869a49a767a 342 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 5 24 4.2E-73 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AMIS_14580 31eba51b8f3e7048928ac869a49a767a 342 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 93 109 4.2E-73 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AMIS_14580 31eba51b8f3e7048928ac869a49a767a 342 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 261 283 4.2E-73 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AMIS_14580 31eba51b8f3e7048928ac869a49a767a 342 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 31 44 4.2E-73 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AMIS_14580 31eba51b8f3e7048928ac869a49a767a 342 Hamap MF_01976 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 1 341 44.12 T 14-10-2018 IPR012829 Phosphofructokinase, mixed-substrate PFK group III GO:0006096|GO:0047334 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 AMIS_14580 31eba51b8f3e7048928ac869a49a767a 342 TIGRFAM TIGR02483 PFK_mixed: phosphofructokinase 2 320 2.4E-150 T 14-10-2018 IPR012829 Phosphofructokinase, mixed-substrate PFK group III GO:0006096|GO:0047334 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 AMIS_14580 31eba51b8f3e7048928ac869a49a767a 342 Pfam PF00365 Phosphofructokinase 2 296 9.3E-106 T 14-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AMIS_14580 31eba51b8f3e7048928ac869a49a767a 342 SUPERFAMILY SSF53784 1 333 6.15E-121 T 14-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AMIS_14580 31eba51b8f3e7048928ac869a49a767a 342 Gene3D G3DSA:3.40.50.450 3 320 4.0E-113 T 14-10-2018 AMIS_15190 4db019b2727d6bb490fa58b59f1f4b9c 494 SUPERFAMILY SSF63418 6 105 3.01E-21 T 14-10-2018 IPR035911 MurE/MurF, N-terminal AMIS_15190 4db019b2727d6bb490fa58b59f1f4b9c 494 SUPERFAMILY SSF53244 332 491 6.54E-41 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AMIS_15190 4db019b2727d6bb490fa58b59f1f4b9c 494 Pfam PF08245 Mur ligase middle domain 114 311 8.9E-43 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AMIS_15190 4db019b2727d6bb490fa58b59f1f4b9c 494 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 9 490 30.72 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 AMIS_15190 4db019b2727d6bb490fa58b59f1f4b9c 494 Gene3D G3DSA:3.40.1190.10 105 331 9.6E-73 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AMIS_15190 4db019b2727d6bb490fa58b59f1f4b9c 494 SUPERFAMILY SSF53623 105 327 2.35E-61 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AMIS_15190 4db019b2727d6bb490fa58b59f1f4b9c 494 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 23 490 2.7E-133 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 AMIS_15190 4db019b2727d6bb490fa58b59f1f4b9c 494 Pfam PF02875 Mur ligase family, glutamate ligase domain 332 420 2.8E-19 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 AMIS_15190 4db019b2727d6bb490fa58b59f1f4b9c 494 Gene3D G3DSA:3.40.1390.10 2 104 5.2E-32 T 14-10-2018 AMIS_15190 4db019b2727d6bb490fa58b59f1f4b9c 494 Pfam PF01225 Mur ligase family, catalytic domain 26 101 5.9E-10 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AMIS_15190 4db019b2727d6bb490fa58b59f1f4b9c 494 Gene3D G3DSA:3.90.190.20 334 493 5.5E-51 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AMIS_47320 ccb6588ab4326b509f8d62ea4d0f1783 661 SUPERFAMILY SSF55785 137 246 2.09E-6 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_47320 ccb6588ab4326b509f8d62ea4d0f1783 661 SUPERFAMILY SSF47384 420 503 6.87E-15 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_47320 ccb6588ab4326b509f8d62ea4d0f1783 661 SMART SM00091 13 80 3.0E-5 T 14-10-2018 IPR000014 PAS domain AMIS_47320 ccb6588ab4326b509f8d62ea4d0f1783 661 SMART SM00091 136 200 33.0 T 14-10-2018 IPR000014 PAS domain AMIS_47320 ccb6588ab4326b509f8d62ea4d0f1783 661 SMART SM00065 275 431 4.2E-11 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_47320 ccb6588ab4326b509f8d62ea4d0f1783 661 Gene3D G3DSA:3.30.450.40 249 422 9.1E-22 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_47320 ccb6588ab4326b509f8d62ea4d0f1783 661 Gene3D G3DSA:3.30.450.20 4 125 1.2E-13 T 14-10-2018 AMIS_47320 ccb6588ab4326b509f8d62ea4d0f1783 661 Gene3D G3DSA:1.10.287.130 423 503 5.2E-17 T 14-10-2018 AMIS_47320 ccb6588ab4326b509f8d62ea4d0f1783 661 SUPERFAMILY SSF55781 279 432 1.59E-17 T 14-10-2018 AMIS_47320 ccb6588ab4326b509f8d62ea4d0f1783 661 SMART SM00387 548 660 7.2E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_47320 ccb6588ab4326b509f8d62ea4d0f1783 661 Pfam PF08448 PAS fold 19 122 1.6E-6 T 14-10-2018 IPR013656 PAS fold-4 AMIS_47320 ccb6588ab4326b509f8d62ea4d0f1783 661 Pfam PF00512 His Kinase A (phospho-acceptor) domain 436 503 5.6E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_47320 ccb6588ab4326b509f8d62ea4d0f1783 661 PRINTS PR00344 Bacterial sensor protein C-terminal signature 620 638 2.7E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_47320 ccb6588ab4326b509f8d62ea4d0f1783 661 PRINTS PR00344 Bacterial sensor protein C-terminal signature 644 657 2.7E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_47320 ccb6588ab4326b509f8d62ea4d0f1783 661 PRINTS PR00344 Bacterial sensor protein C-terminal signature 585 599 2.7E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_47320 ccb6588ab4326b509f8d62ea4d0f1783 661 PRINTS PR00344 Bacterial sensor protein C-terminal signature 603 613 2.7E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_47320 ccb6588ab4326b509f8d62ea4d0f1783 661 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 548 659 9.6E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_47320 ccb6588ab4326b509f8d62ea4d0f1783 661 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 18 121 2.2E-9 T 14-10-2018 IPR000014 PAS domain AMIS_47320 ccb6588ab4326b509f8d62ea4d0f1783 661 Pfam PF13185 GAF domain 274 420 3.3E-12 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_47320 ccb6588ab4326b509f8d62ea4d0f1783 661 SMART SM00388 436 503 2.3E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_47320 ccb6588ab4326b509f8d62ea4d0f1783 661 SUPERFAMILY SSF55874 492 658 4.71E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_47320 ccb6588ab4326b509f8d62ea4d0f1783 661 SUPERFAMILY SSF55785 17 115 1.62E-14 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_47320 ccb6588ab4326b509f8d62ea4d0f1783 661 Gene3D G3DSA:3.30.450.20 127 248 1.1E-8 T 14-10-2018 AMIS_47320 ccb6588ab4326b509f8d62ea4d0f1783 661 Gene3D G3DSA:3.30.565.10 504 660 3.8E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_11670 f47ea2cebc68842d4629f0157bef8c61 626 Pfam PF00679 Elongation factor G C-terminus 418 504 4.7E-24 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like AMIS_11670 f47ea2cebc68842d4629f0157bef8c61 626 Gene3D G3DSA:3.40.50.300 16 205 6.8E-69 T 14-10-2018 AMIS_11670 f47ea2cebc68842d4629f0157bef8c61 626 Hamap MF_00071 Elongation factor 4 [lepA]. 1 617 283.486 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 AMIS_11670 f47ea2cebc68842d4629f0157bef8c61 626 TIGRFAM TIGR01393 lepA: elongation factor 4 19 614 1.6E-291 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 AMIS_11670 f47ea2cebc68842d4629f0157bef8c61 626 Pfam PF00009 Elongation factor Tu GTP binding domain 19 200 5.5E-52 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_11670 f47ea2cebc68842d4629f0157bef8c61 626 PRINTS PR00315 GTP-binding elongation factor signature 146 155 6.2E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_11670 f47ea2cebc68842d4629f0157bef8c61 626 PRINTS PR00315 GTP-binding elongation factor signature 94 104 6.2E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_11670 f47ea2cebc68842d4629f0157bef8c61 626 PRINTS PR00315 GTP-binding elongation factor signature 65 73 6.2E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_11670 f47ea2cebc68842d4629f0157bef8c61 626 PRINTS PR00315 GTP-binding elongation factor signature 22 35 6.2E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_11670 f47ea2cebc68842d4629f0157bef8c61 626 PRINTS PR00315 GTP-binding elongation factor signature 110 121 6.2E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_11670 f47ea2cebc68842d4629f0157bef8c61 626 Gene3D G3DSA:3.30.70.2570 499 573 4.4E-34 T 14-10-2018 IPR038363 LepA, C-terminal domain superfamily AMIS_11670 f47ea2cebc68842d4629f0157bef8c61 626 Gene3D G3DSA:3.30.70.870 306 387 5.5E-33 T 14-10-2018 AMIS_11670 f47ea2cebc68842d4629f0157bef8c61 626 Pfam PF06421 GTP-binding protein LepA C-terminus 508 612 2.5E-49 T 14-10-2018 IPR013842 GTP-binding protein LepA, C-terminal AMIS_11670 f47ea2cebc68842d4629f0157bef8c61 626 SUPERFAMILY SSF54980 418 513 1.15E-25 T 14-10-2018 IPR035647 EF-G domain III/V-like AMIS_11670 f47ea2cebc68842d4629f0157bef8c61 626 SUPERFAMILY SSF52540 16 233 2.1E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_11670 f47ea2cebc68842d4629f0157bef8c61 626 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 21 196 2.6E-19 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AMIS_11670 f47ea2cebc68842d4629f0157bef8c61 626 SUPERFAMILY SSF50447 202 304 1.39E-18 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AMIS_11670 f47ea2cebc68842d4629f0157bef8c61 626 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site AMIS_11670 f47ea2cebc68842d4629f0157bef8c61 626 Gene3D G3DSA:2.40.30.10 206 305 1.3E-31 T 14-10-2018 AMIS_11670 f47ea2cebc68842d4629f0157bef8c61 626 SUPERFAMILY SSF54980 311 390 3.96E-18 T 14-10-2018 IPR035647 EF-G domain III/V-like AMIS_11670 f47ea2cebc68842d4629f0157bef8c61 626 SMART SM00838 417 505 9.1E-5 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like AMIS_11670 f47ea2cebc68842d4629f0157bef8c61 626 Gene3D G3DSA:3.30.70.3380 388 497 1.5E-40 T 14-10-2018 AMIS_57160 ef6450bc07b15b91b93af62732d88737 339 SUPERFAMILY SSF50475 4 157 4.91E-48 T 14-10-2018 AMIS_57160 ef6450bc07b15b91b93af62732d88737 339 Gene3D G3DSA:2.30.110.10 2 163 4.0E-51 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AMIS_57160 ef6450bc07b15b91b93af62732d88737 339 Pfam PF01613 Flavin reductase like domain 14 159 1.1E-37 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 AMIS_57160 ef6450bc07b15b91b93af62732d88737 339 Gene3D G3DSA:3.20.20.70 188 329 6.3E-9 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_57160 ef6450bc07b15b91b93af62732d88737 339 SMART SM00903 12 158 7.4E-53 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 AMIS_4810 cecd7e8997c5f7adf45cd38f4a760c74 655 SMART SM00710 409 431 1800.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMIS_4810 cecd7e8997c5f7adf45cd38f4a760c74 655 SMART SM00710 385 407 1700.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMIS_4810 cecd7e8997c5f7adf45cd38f4a760c74 655 SMART SM00710 460 484 4000.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMIS_4810 cecd7e8997c5f7adf45cd38f4a760c74 655 SMART SM00710 436 459 1200.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMIS_4810 cecd7e8997c5f7adf45cd38f4a760c74 655 SMART SM00710 280 324 5400.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMIS_4810 cecd7e8997c5f7adf45cd38f4a760c74 655 SMART SM00710 362 383 1700.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMIS_4810 cecd7e8997c5f7adf45cd38f4a760c74 655 SMART SM00710 561 582 8100.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMIS_4810 cecd7e8997c5f7adf45cd38f4a760c74 655 Gene3D G3DSA:2.160.20.10 236 519 3.3E-32 T 14-10-2018 IPR012334 Pectin lyase fold AMIS_4810 cecd7e8997c5f7adf45cd38f4a760c74 655 SUPERFAMILY SSF51126 230 576 5.06E-32 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor AMIS_4810 cecd7e8997c5f7adf45cd38f4a760c74 655 Pfam PF12708 Pectate lyase superfamily protein 237 466 2.5E-16 T 14-10-2018 IPR024535 Pectate lyase superfamily protein AMIS_36700 38486d3b2ab47afaa7762a9abfd11258 372 SUPERFAMILY SSF53474 10 252 4.72E-41 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_36700 38486d3b2ab47afaa7762a9abfd11258 372 SUPERFAMILY SSF69118 256 372 2.49E-34 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AMIS_36700 38486d3b2ab47afaa7762a9abfd11258 372 TIGRFAM TIGR02425 decarb_PcaC: 4-carboxymuconolactone decarboxylase 257 372 8.0E-50 T 14-10-2018 IPR012788 4-carboxymuconolactone decarboxylase KEGG: 00362+4.1.1.44 AMIS_36700 38486d3b2ab47afaa7762a9abfd11258 372 Gene3D G3DSA:3.40.50.1820 2 253 6.2E-49 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_36700 38486d3b2ab47afaa7762a9abfd11258 372 Pfam PF02627 Carboxymuconolactone decarboxylase family 285 367 1.0E-23 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AMIS_36700 38486d3b2ab47afaa7762a9abfd11258 372 Gene3D G3DSA:1.20.1290.10 255 372 7.6E-38 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AMIS_36700 38486d3b2ab47afaa7762a9abfd11258 372 PRINTS PR00111 Alpha/beta hydrolase fold signature 40 55 5.3E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_36700 38486d3b2ab47afaa7762a9abfd11258 372 PRINTS PR00111 Alpha/beta hydrolase fold signature 99 112 5.3E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_36700 38486d3b2ab47afaa7762a9abfd11258 372 PRINTS PR00111 Alpha/beta hydrolase fold signature 85 98 5.3E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_36700 38486d3b2ab47afaa7762a9abfd11258 372 PRINTS PR00111 Alpha/beta hydrolase fold signature 198 212 5.3E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_36700 38486d3b2ab47afaa7762a9abfd11258 372 Pfam PF00561 alpha/beta hydrolase fold 34 126 3.8E-12 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_50060 1b2fa13af66ac0c0124a9d59a2daa1af 1307 SUPERFAMILY SSF52540 372 637 4.73E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_50060 1b2fa13af66ac0c0124a9d59a2daa1af 1307 Gene3D G3DSA:3.40.50.300 579 658 1.6E-15 T 14-10-2018 AMIS_50060 1b2fa13af66ac0c0124a9d59a2daa1af 1307 Pfam PF00005 ABC transporter 389 508 4.0E-14 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_50060 1b2fa13af66ac0c0124a9d59a2daa1af 1307 Gene3D G3DSA:3.40.50.300 368 528 1.5E-23 T 14-10-2018 AMIS_50060 1b2fa13af66ac0c0124a9d59a2daa1af 1307 SUPERFAMILY SSF52540 1100 1300 2.02E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_50060 1b2fa13af66ac0c0124a9d59a2daa1af 1307 SUPERFAMILY SSF90123 769 1062 4.45E-13 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMIS_50060 1b2fa13af66ac0c0124a9d59a2daa1af 1307 SMART SM00382 393 640 6.5E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_50060 1b2fa13af66ac0c0124a9d59a2daa1af 1307 SMART SM00382 1129 1303 3.0E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_50060 1b2fa13af66ac0c0124a9d59a2daa1af 1307 Pfam PF00005 ABC transporter 1120 1256 8.1E-20 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_50060 1b2fa13af66ac0c0124a9d59a2daa1af 1307 Gene3D G3DSA:1.20.1560.10 759 1062 5.4E-6 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMIS_50060 1b2fa13af66ac0c0124a9d59a2daa1af 1307 Gene3D G3DSA:1.20.1560.10 11 327 4.8E-41 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMIS_50060 1b2fa13af66ac0c0124a9d59a2daa1af 1307 Gene3D G3DSA:3.40.50.300 1094 1306 5.4E-50 T 14-10-2018 AMIS_50060 1b2fa13af66ac0c0124a9d59a2daa1af 1307 ProSitePatterns PS00211 ABC transporters family signature. 484 498 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_50060 1b2fa13af66ac0c0124a9d59a2daa1af 1307 SUPERFAMILY SSF90123 23 310 9.55E-47 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMIS_50060 1b2fa13af66ac0c0124a9d59a2daa1af 1307 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 769 1286 6.0E-113 T 14-10-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0016021|GO:0034775|GO:0042626|GO:0045454 AMIS_50060 1b2fa13af66ac0c0124a9d59a2daa1af 1307 Pfam PF00664 ABC transporter transmembrane region 71 285 2.0E-24 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AMIS_14080 00ec8129b78ece39702fb43e688a8e5e 392 Gene3D G3DSA:3.40.50.10800 133 389 2.2E-79 T 14-10-2018 AMIS_14080 00ec8129b78ece39702fb43e688a8e5e 392 Hamap MF_00569 Quinolinate synthase A [nadA]. 43 391 54.574 T 14-10-2018 IPR023515 Quinolinate synthase A, type 3 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AMIS_14080 00ec8129b78ece39702fb43e688a8e5e 392 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 59 391 5.0E-99 T 14-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AMIS_14080 00ec8129b78ece39702fb43e688a8e5e 392 Gene3D G3DSA:3.40.50.10800 254 342 2.2E-79 T 14-10-2018 AMIS_14080 00ec8129b78ece39702fb43e688a8e5e 392 Pfam PF02445 Quinolinate synthetase A protein 54 390 6.6E-106 T 14-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AMIS_14080 00ec8129b78ece39702fb43e688a8e5e 392 SUPERFAMILY SSF142754 53 391 3.79E-94 T 14-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AMIS_14080 00ec8129b78ece39702fb43e688a8e5e 392 Gene3D G3DSA:3.40.50.10800 61 372 2.2E-79 T 14-10-2018 AMIS_79690 c295038ff8d9966e8264684213692e1a 267 SMART SM00422 2 72 1.2E-14 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_79690 c295038ff8d9966e8264684213692e1a 267 SUPERFAMILY SSF46955 2 99 6.96E-22 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily AMIS_79690 c295038ff8d9966e8264684213692e1a 267 Pfam PF13411 MerR HTH family regulatory protein 3 71 4.6E-15 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_79690 c295038ff8d9966e8264684213692e1a 267 Gene3D G3DSA:1.10.1660.10 2 110 1.8E-22 T 14-10-2018 AMIS_15180 eb251cec1a34521eb51378fbdb503faa 690 Pfam PF00905 Penicillin binding protein transpeptidase domain 362 667 2.5E-66 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AMIS_15180 eb251cec1a34521eb51378fbdb503faa 690 Gene3D G3DSA:3.40.710.10 394 592 7.8E-90 T 14-10-2018 AMIS_15180 eb251cec1a34521eb51378fbdb503faa 690 SUPERFAMILY SSF56601 284 676 5.11E-82 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMIS_15180 eb251cec1a34521eb51378fbdb503faa 690 Gene3D G3DSA:3.30.450.330 337 671 7.8E-90 T 14-10-2018 AMIS_15180 eb251cec1a34521eb51378fbdb503faa 690 Pfam PF03717 Penicillin-binding Protein dimerisation domain 162 309 5.1E-18 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AMIS_15180 eb251cec1a34521eb51378fbdb503faa 690 SUPERFAMILY SSF56519 158 335 1.96E-36 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 AMIS_15180 eb251cec1a34521eb51378fbdb503faa 690 Gene3D G3DSA:3.90.1310.30 155 335 5.1E-40 T 14-10-2018 AMIS_1830 0e827d63acc79a40f085ff215554d2d2 516 SUPERFAMILY SSF51126 303 480 2.79E-53 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor AMIS_1830 0e827d63acc79a40f085ff215554d2d2 516 Gene3D G3DSA:2.160.20.10 302 516 3.5E-74 T 14-10-2018 IPR012334 Pectin lyase fold AMIS_1830 0e827d63acc79a40f085ff215554d2d2 516 Gene3D G3DSA:2.60.120.560 48 210 2.2E-30 T 14-10-2018 AMIS_1830 0e827d63acc79a40f085ff215554d2d2 516 Pfam PF03211 Pectate lyase 291 489 2.2E-81 T 14-10-2018 IPR004898 Pectate lyase PlyH/PlyE-like GO:0005576|GO:0030570 KEGG: 00040+4.2.2.2 AMIS_9570 1e13d1bf56722784df1242452d10944a 271 Pfam PF03473 MOSC domain 135 265 7.3E-29 T 14-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 AMIS_9570 1e13d1bf56722784df1242452d10944a 271 SUPERFAMILY SSF50800 2 269 1.36E-20 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily AMIS_9570 1e13d1bf56722784df1242452d10944a 271 Pfam PF03476 MOSC N-terminal beta barrel domain 2 113 1.2E-18 T 14-10-2018 IPR005303 MOSC, N-terminal beta barrel KEGG: 00790+2.8.1.9|MetaCyc: PWY-5963 AMIS_9570 1e13d1bf56722784df1242452d10944a 271 SUPERFAMILY SSF141673 3 126 6.41E-24 T 14-10-2018 AMIS_700 060247b5652d8b8c01bddf405261169c 201 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 1 190 8.0E-52 T 14-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D AMIS_700 060247b5652d8b8c01bddf405261169c 201 Gene3D G3DSA:3.30.1360.40 1 73 2.5E-12 T 14-10-2018 AMIS_700 060247b5652d8b8c01bddf405261169c 201 Gene3D G3DSA:2.40.100.10 74 200 4.4E-45 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily AMIS_700 060247b5652d8b8c01bddf405261169c 201 SMART SM00796 1 190 2.7E-54 T 14-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D AMIS_700 060247b5652d8b8c01bddf405261169c 201 SUPERFAMILY SSF50891 79 198 4.93E-34 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily AMIS_5180 da0bbffaf1f0ac34d98fad543854563d 398 Gene3D G3DSA:3.40.50.2300 9 156 2.4E-19 T 14-10-2018 AMIS_5180 da0bbffaf1f0ac34d98fad543854563d 398 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 202 394 2.8E-33 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_5180 da0bbffaf1f0ac34d98fad543854563d 398 Gene3D G3DSA:3.60.40.10 170 395 2.2E-38 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_5180 da0bbffaf1f0ac34d98fad543854563d 398 SMART SM00448 19 130 1.0E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_5180 da0bbffaf1f0ac34d98fad543854563d 398 SUPERFAMILY SSF81606 189 356 1.99E-5 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_5180 da0bbffaf1f0ac34d98fad543854563d 398 Pfam PF00072 Response regulator receiver domain 21 120 1.7E-11 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_5180 da0bbffaf1f0ac34d98fad543854563d 398 SUPERFAMILY SSF52172 17 182 5.12E-23 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_5180 da0bbffaf1f0ac34d98fad543854563d 398 SMART SM00331 172 394 1.8E-18 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_70450 ed6aabd8b97526d6bcbc31b6376124b8 834 Pfam PF00535 Glycosyl transferase family 2 205 321 4.0E-24 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AMIS_70450 ed6aabd8b97526d6bcbc31b6376124b8 834 SUPERFAMILY SSF53448 202 381 1.31E-33 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_70450 ed6aabd8b97526d6bcbc31b6376124b8 834 Gene3D G3DSA:3.90.550.10 186 400 7.6E-31 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_51400 74e3497a735766c98b3094cfc3cb23b7 178 Pfam PF08281 Sigma-70, region 4 105 152 3.1E-8 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_51400 74e3497a735766c98b3094cfc3cb23b7 178 Pfam PF04542 Sigma-70 region 2 10 77 7.6E-6 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_51400 74e3497a735766c98b3094cfc3cb23b7 178 SUPERFAMILY SSF88659 105 157 1.2E-9 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_51400 74e3497a735766c98b3094cfc3cb23b7 178 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 4 156 4.1E-12 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_51400 74e3497a735766c98b3094cfc3cb23b7 178 Gene3D G3DSA:1.10.10.10 104 158 9.1E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_51400 74e3497a735766c98b3094cfc3cb23b7 178 Gene3D G3DSA:1.10.1740.10 1 73 9.2E-7 T 14-10-2018 AMIS_51400 74e3497a735766c98b3094cfc3cb23b7 178 SUPERFAMILY SSF88946 7 89 2.83E-9 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_45510 84ac27fd05cfcf8dc0a98480ed837ac6 434 PIRSF PIRSF015578 1 385 2.4E-77 T 14-10-2018 IPR002587 Myo-inositol-1-phosphate synthase GO:0004512|GO:0006021|GO:0008654 KEGG: 00521+5.5.1.4|KEGG: 00562+5.5.1.4|MetaCyc: PWY-2301|MetaCyc: PWY-4661|MetaCyc: PWY-6372|MetaCyc: PWY-6580|MetaCyc: PWY-6664|Reactome: R-HSA-1855183 AMIS_45510 84ac27fd05cfcf8dc0a98480ed837ac6 434 SUPERFAMILY SSF55347 213 317 1.28E-27 T 14-10-2018 AMIS_45510 84ac27fd05cfcf8dc0a98480ed837ac6 434 Gene3D G3DSA:3.30.360.10 214 314 3.1E-117 T 14-10-2018 AMIS_45510 84ac27fd05cfcf8dc0a98480ed837ac6 434 Gene3D G3DSA:3.40.50.720 6 366 3.1E-117 T 14-10-2018 AMIS_45510 84ac27fd05cfcf8dc0a98480ed837ac6 434 Pfam PF07994 Myo-inositol-1-phosphate synthase 3 372 5.7E-40 T 14-10-2018 IPR002587 Myo-inositol-1-phosphate synthase GO:0004512|GO:0006021|GO:0008654 KEGG: 00521+5.5.1.4|KEGG: 00562+5.5.1.4|MetaCyc: PWY-2301|MetaCyc: PWY-4661|MetaCyc: PWY-6372|MetaCyc: PWY-6580|MetaCyc: PWY-6664|Reactome: R-HSA-1855183 AMIS_45510 84ac27fd05cfcf8dc0a98480ed837ac6 434 SUPERFAMILY SSF51735 3 373 6.38E-58 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_45510 84ac27fd05cfcf8dc0a98480ed837ac6 434 Pfam PF01658 Myo-inositol-1-phosphate synthase 214 318 1.3E-25 T 14-10-2018 IPR013021 Myo-inositol-1-phosphate synthase, GAPDH-like KEGG: 00521+5.5.1.4|KEGG: 00562+5.5.1.4|MetaCyc: PWY-2301|MetaCyc: PWY-4661|MetaCyc: PWY-6372|MetaCyc: PWY-6580|MetaCyc: PWY-6664|Reactome: R-HSA-1855183 AMIS_50750 218e723ffd92c35c65e3badb99584a7f 201 Gene3D G3DSA:1.10.10.60 7 57 1.3E-27 T 14-10-2018 AMIS_50750 218e723ffd92c35c65e3badb99584a7f 201 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 63 3.4E-17 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_50750 218e723ffd92c35c65e3badb99584a7f 201 Gene3D G3DSA:1.10.357.10 58 200 2.4E-34 T 14-10-2018 AMIS_50750 218e723ffd92c35c65e3badb99584a7f 201 SUPERFAMILY SSF46689 7 64 4.09E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_50750 218e723ffd92c35c65e3badb99584a7f 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 2.2E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_50750 218e723ffd92c35c65e3badb99584a7f 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 2.2E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_4800 0a416b730deacb0def76f566f0f7bc14 315 SUPERFAMILY SSF47413 5 57 8.84E-9 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_4800 0a416b730deacb0def76f566f0f7bc14 315 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 47 2.6E-9 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_4800 0a416b730deacb0def76f566f0f7bc14 315 Pfam PF13407 Periplasmic binding protein domain 114 271 1.0E-13 T 14-10-2018 IPR025997 Periplasmic binding protein AMIS_4800 0a416b730deacb0def76f566f0f7bc14 315 Gene3D G3DSA:1.10.260.40 1 59 1.7E-11 T 14-10-2018 AMIS_4800 0a416b730deacb0def76f566f0f7bc14 315 Gene3D G3DSA:3.40.50.2300 100 272 8.4E-19 T 14-10-2018 AMIS_4800 0a416b730deacb0def76f566f0f7bc14 315 SMART SM00354 4 68 4.5E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_4800 0a416b730deacb0def76f566f0f7bc14 315 SUPERFAMILY SSF53822 63 274 5.65E-17 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_4800 0a416b730deacb0def76f566f0f7bc14 315 Gene3D G3DSA:3.40.50.2300 153 270 8.4E-19 T 14-10-2018 AMIS_43810 a5865802a5ff1440a0bbd6ca4dd9dc86 208 Gene3D G3DSA:3.60.15.10 1 184 1.8E-26 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMIS_43810 a5865802a5ff1440a0bbd6ca4dd9dc86 208 SMART SM00849 7 173 0.0072 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMIS_43810 a5865802a5ff1440a0bbd6ca4dd9dc86 208 SUPERFAMILY SSF56281 7 175 1.05E-19 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMIS_43810 a5865802a5ff1440a0bbd6ca4dd9dc86 208 Pfam PF13483 Beta-lactamase superfamily domain 6 173 1.5E-15 T 14-10-2018 AMIS_80760 c4447e8c5f3edea08c240ec1b2df832b 453 Pfam PF09594 Glycosyltransferase family 87 74 340 2.2E-33 T 14-10-2018 IPR018584 Glycosyltransferase family 87 GO:0016758 AMIS_27050 16622056b56200d08b7f61cd335ff61a 376 SUPERFAMILY SSF50129 325 373 1.27E-8 T 14-10-2018 IPR011032 GroES-like superfamily AMIS_27050 16622056b56200d08b7f61cd335ff61a 376 Gene3D G3DSA:3.90.180.10 7 371 9.0E-116 T 14-10-2018 AMIS_27050 16622056b56200d08b7f61cd335ff61a 376 SUPERFAMILY SSF50129 1 197 1.26E-57 T 14-10-2018 IPR011032 GroES-like superfamily AMIS_27050 16622056b56200d08b7f61cd335ff61a 376 SUPERFAMILY SSF51735 163 339 1.78E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_27050 16622056b56200d08b7f61cd335ff61a 376 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 158 5.8E-28 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMIS_27050 16622056b56200d08b7f61cd335ff61a 376 Pfam PF00107 Zinc-binding dehydrogenase 201 330 1.2E-18 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMIS_27050 16622056b56200d08b7f61cd335ff61a 376 Gene3D G3DSA:3.40.50.720 178 317 9.0E-116 T 14-10-2018 AMIS_27050 16622056b56200d08b7f61cd335ff61a 376 SMART SM00829 12 373 2.5E-4 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMIS_27050 16622056b56200d08b7f61cd335ff61a 376 TIGRFAM TIGR03989 Rxyl_3153: NDMA-dependent alcohol dehydrogenase, Rxyl_3153 family 2 374 8.6E-154 T 14-10-2018 IPR023921 Alcohol dehydrogenase, zinc-type, actinomycetes KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 AMIS_27050 16622056b56200d08b7f61cd335ff61a 376 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 60 74 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AMIS_77340 8c933f77e1d3d60128a587dfbc5bc136 471 Gene3D G3DSA:3.40.50.620 1 310 2.3E-113 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMIS_77340 8c933f77e1d3d60128a587dfbc5bc136 471 SMART SM00840 346 407 1.1E-15 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 AMIS_77340 8c933f77e1d3d60128a587dfbc5bc136 471 SUPERFAMILY SSF47323 322 467 1.83E-33 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMIS_77340 8c933f77e1d3d60128a587dfbc5bc136 471 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 3 468 34.996 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 AMIS_77340 8c933f77e1d3d60128a587dfbc5bc136 471 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 17 317 3.4E-106 T 14-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 AMIS_77340 8c933f77e1d3d60128a587dfbc5bc136 471 Pfam PF09190 DALR domain 346 399 1.1E-11 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 AMIS_77340 8c933f77e1d3d60128a587dfbc5bc136 471 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 227 248 1.5E-26 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AMIS_77340 8c933f77e1d3d60128a587dfbc5bc136 471 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 196 214 1.5E-26 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AMIS_77340 8c933f77e1d3d60128a587dfbc5bc136 471 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 26 37 1.5E-26 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AMIS_77340 8c933f77e1d3d60128a587dfbc5bc136 471 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 62 71 1.5E-26 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AMIS_77340 8c933f77e1d3d60128a587dfbc5bc136 471 SUPERFAMILY SSF52374 3 316 1.89E-77 T 14-10-2018 AMIS_77340 8c933f77e1d3d60128a587dfbc5bc136 471 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 3 466 4.3E-128 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 AMIS_77340 8c933f77e1d3d60128a587dfbc5bc136 471 Gene3D G3DSA:1.20.120.640 311 467 4.3E-35 T 14-10-2018 AMIS_12080 66a464d839d37e400edbfd86b3cd461d 113 SUPERFAMILY SSF54909 2 66 8.67E-14 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel AMIS_12080 66a464d839d37e400edbfd86b3cd461d 113 Pfam PF03992 Antibiotic biosynthesis monooxygenase 2 66 6.4E-10 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain AMIS_12080 66a464d839d37e400edbfd86b3cd461d 113 Gene3D G3DSA:3.30.70.100 1 105 1.6E-18 T 14-10-2018 AMIS_12270 4a5fd0b571bd4a153799487db12cc173 249 PIRSF PIRSF006648 6 248 1.6E-17 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AMIS_12270 4a5fd0b571bd4a153799487db12cc173 249 Pfam PF01061 ABC-2 type transporter 8 210 3.5E-17 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 AMIS_12270 4a5fd0b571bd4a153799487db12cc173 249 PRINTS PR00164 ABC-2 type transport system membrane protein signature 96 121 9.6E-13 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AMIS_12270 4a5fd0b571bd4a153799487db12cc173 249 PRINTS PR00164 ABC-2 type transport system membrane protein signature 133 157 9.6E-13 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AMIS_12270 4a5fd0b571bd4a153799487db12cc173 249 PRINTS PR00164 ABC-2 type transport system membrane protein signature 170 189 9.6E-13 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AMIS_12270 4a5fd0b571bd4a153799487db12cc173 249 PRINTS PR00164 ABC-2 type transport system membrane protein signature 190 209 9.6E-13 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AMIS_12270 4a5fd0b571bd4a153799487db12cc173 249 PRINTS PR00164 ABC-2 type transport system membrane protein signature 51 73 9.6E-13 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AMIS_12270 4a5fd0b571bd4a153799487db12cc173 249 PRINTS PR00164 ABC-2 type transport system membrane protein signature 20 41 9.6E-13 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AMIS_48100 4fc83c43e2e7feeab79c85194b1d47d5 568 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 373 539 4.2E-32 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_48100 4fc83c43e2e7feeab79c85194b1d47d5 568 SMART SM00283 313 567 1.4E-47 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_48100 4fc83c43e2e7feeab79c85194b1d47d5 568 Pfam PF12729 Four helix bundle sensory module for signal transduction 46 225 9.4E-17 T 14-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain AMIS_48100 4fc83c43e2e7feeab79c85194b1d47d5 568 Gene3D G3DSA:1.10.287.950 253 568 4.7E-63 T 14-10-2018 AMIS_48100 4fc83c43e2e7feeab79c85194b1d47d5 568 SMART SM00304 253 305 7.0E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_48100 4fc83c43e2e7feeab79c85194b1d47d5 568 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 440 469 3.7E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_48100 4fc83c43e2e7feeab79c85194b1d47d5 568 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 411 438 3.7E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_48100 4fc83c43e2e7feeab79c85194b1d47d5 568 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 488 517 3.7E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_48100 4fc83c43e2e7feeab79c85194b1d47d5 568 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 334 363 3.7E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_48100 4fc83c43e2e7feeab79c85194b1d47d5 568 SUPERFAMILY SSF58104 273 566 1.96E-62 T 14-10-2018 AMIS_52680 9df2be9a8c8c030208b4f8a660a52f2d 580 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 273 293 9.2E-15 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_52680 9df2be9a8c8c030208b4f8a660a52f2d 580 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 485 514 9.2E-15 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_52680 9df2be9a8c8c030208b4f8a660a52f2d 580 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 456 483 9.2E-15 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_52680 9df2be9a8c8c030208b4f8a660a52f2d 580 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 423 567 1.7E-23 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_52680 9df2be9a8c8c030208b4f8a660a52f2d 580 Gene3D G3DSA:1.10.287.950 299 576 5.3E-37 T 14-10-2018 AMIS_52680 9df2be9a8c8c030208b4f8a660a52f2d 580 SMART SM00283 328 579 2.2E-4 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_52680 9df2be9a8c8c030208b4f8a660a52f2d 580 SMART SM00304 302 352 0.0069 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_52680 9df2be9a8c8c030208b4f8a660a52f2d 580 SUPERFAMILY SSF58104 320 571 2.62E-36 T 14-10-2018 AMIS_52680 9df2be9a8c8c030208b4f8a660a52f2d 580 Pfam PF05228 CHASE4 domain 58 206 1.0E-11 T 14-10-2018 IPR007892 CHASE4 AMIS_73390 5ecd33dc7caab0a374e5bf616cc6bb1a 435 Gene3D G3DSA:3.30.830.10 9 231 2.7E-58 T 14-10-2018 AMIS_73390 5ecd33dc7caab0a374e5bf616cc6bb1a 435 SUPERFAMILY SSF63411 10 229 1.93E-48 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMIS_73390 5ecd33dc7caab0a374e5bf616cc6bb1a 435 SUPERFAMILY SSF63411 242 419 5.33E-20 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMIS_73390 5ecd33dc7caab0a374e5bf616cc6bb1a 435 Pfam PF05193 Peptidase M16 inactive domain 180 364 6.5E-22 T 14-10-2018 IPR007863 Peptidase M16, C-terminal AMIS_73390 5ecd33dc7caab0a374e5bf616cc6bb1a 435 Gene3D G3DSA:3.30.830.10 235 431 1.4E-28 T 14-10-2018 AMIS_73390 5ecd33dc7caab0a374e5bf616cc6bb1a 435 Pfam PF00675 Insulinase (Peptidase family M16) 24 141 2.3E-18 T 14-10-2018 IPR011765 Peptidase M16, N-terminal AMIS_52230 04a8c1f8d0518c14a8c33b695e1c53fa 494 Gene3D G3DSA:3.40.50.10940 1 171 9.1E-77 T 14-10-2018 IPR038583 L-arabinose isomerase, N-terminal domain superfamily KEGG: 00040+5.3.1.4 AMIS_52230 04a8c1f8d0518c14a8c33b695e1c53fa 494 PIRSF PIRSF001478 1 492 2.0E-226 T 14-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 AMIS_52230 04a8c1f8d0518c14a8c33b695e1c53fa 494 Pfam PF11762 L-arabinose isomerase C-terminal domain 355 468 5.9E-49 T 14-10-2018 IPR024664 L-arabinose isomerase, C-terminal KEGG: 00040+5.3.1.4 AMIS_52230 04a8c1f8d0518c14a8c33b695e1c53fa 494 ProDom PD018364 ISOMERASE L-ARABINOSE ARABINOSE METABOLISM CARBOHYDRATE CATABOLISM ARAA 5 297 5.0E-111 T 14-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 AMIS_52230 04a8c1f8d0518c14a8c33b695e1c53fa 494 SUPERFAMILY SSF50443 322 490 2.88E-68 T 14-10-2018 IPR004216 L-fucose/L-arabinose isomerase, C-terminal AMIS_52230 04a8c1f8d0518c14a8c33b695e1c53fa 494 Hamap MF_00519 L-arabinose isomerase [araA]. 1 469 62.213 T 14-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 AMIS_52230 04a8c1f8d0518c14a8c33b695e1c53fa 494 SUPERFAMILY SSF53743 2 318 2.88E-112 T 14-10-2018 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily GO:0005737|GO:0005996|GO:0016861 AMIS_52230 04a8c1f8d0518c14a8c33b695e1c53fa 494 Pfam PF02610 L-arabinose isomerase 2 352 5.2E-169 T 14-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 AMIS_24870 f2ba4d1502d0f388d030a1fbcfca44ff 346 Gene3D G3DSA:3.40.50.300 14 234 1.9E-66 T 14-10-2018 AMIS_24870 f2ba4d1502d0f388d030a1fbcfca44ff 346 Gene3D G3DSA:2.40.50.100 268 338 1.3E-11 T 14-10-2018 AMIS_24870 f2ba4d1502d0f388d030a1fbcfca44ff 346 SMART SM00382 25 208 2.4E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_24870 f2ba4d1502d0f388d030a1fbcfca44ff 346 SUPERFAMILY SSF50331 238 342 3.89E-17 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal AMIS_24870 f2ba4d1502d0f388d030a1fbcfca44ff 346 Pfam PF00005 ABC transporter 18 158 1.2E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_24870 f2ba4d1502d0f388d030a1fbcfca44ff 346 Pfam PF03459 TOBE domain 282 340 2.2E-10 T 14-10-2018 IPR005116 Transport-associated OB, type 1 AMIS_24870 f2ba4d1502d0f388d030a1fbcfca44ff 346 Gene3D G3DSA:2.40.50.140 241 339 1.3E-11 T 14-10-2018 AMIS_24870 f2ba4d1502d0f388d030a1fbcfca44ff 346 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_24870 f2ba4d1502d0f388d030a1fbcfca44ff 346 SUPERFAMILY SSF52540 12 233 2.08E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_81120 f86f8eb94cb0c14f3001c269ba64003a 105 SUPERFAMILY SSF52833 2 105 3.22E-34 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMIS_81120 f86f8eb94cb0c14f3001c269ba64003a 105 Pfam PF00085 Thioredoxin 1 102 2.3E-30 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 AMIS_81120 f86f8eb94cb0c14f3001c269ba64003a 105 Gene3D G3DSA:3.40.30.10 1 105 3.3E-32 T 14-10-2018 AMIS_81120 f86f8eb94cb0c14f3001c269ba64003a 105 PIRSF PIRSF000077 1 105 2.5E-37 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AMIS_81120 f86f8eb94cb0c14f3001c269ba64003a 105 PRINTS PR00421 Thioredoxin family signature 20 28 4.5E-7 T 14-10-2018 AMIS_81120 f86f8eb94cb0c14f3001c269ba64003a 105 PRINTS PR00421 Thioredoxin family signature 69 80 4.5E-7 T 14-10-2018 AMIS_81120 f86f8eb94cb0c14f3001c269ba64003a 105 PRINTS PR00421 Thioredoxin family signature 28 37 4.5E-7 T 14-10-2018 AMIS_81120 f86f8eb94cb0c14f3001c269ba64003a 105 ProSitePatterns PS00194 Thioredoxin family active site. 21 39 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AMIS_81120 f86f8eb94cb0c14f3001c269ba64003a 105 TIGRFAM TIGR01068 thioredoxin: thioredoxin 5 103 4.9E-35 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AMIS_50690 ef56932db69ff82bc510a2ed6cef4193 576 Pfam PF00664 ABC transporter transmembrane region 8 274 1.0E-29 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AMIS_50690 ef56932db69ff82bc510a2ed6cef4193 576 SUPERFAMILY SSF90123 2 304 6.67E-53 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMIS_50690 ef56932db69ff82bc510a2ed6cef4193 576 Gene3D G3DSA:3.40.50.300 321 562 3.0E-75 T 14-10-2018 AMIS_50690 ef56932db69ff82bc510a2ed6cef4193 576 ProSitePatterns PS00211 ABC transporters family signature. 460 474 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_50690 ef56932db69ff82bc510a2ed6cef4193 576 Pfam PF00005 ABC transporter 343 488 3.3E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_50690 ef56932db69ff82bc510a2ed6cef4193 576 SUPERFAMILY SSF52540 322 556 2.56E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_50690 ef56932db69ff82bc510a2ed6cef4193 576 Gene3D G3DSA:1.20.1560.10 1 307 2.5E-55 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMIS_50690 ef56932db69ff82bc510a2ed6cef4193 576 SMART SM00382 350 534 9.0E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_36570 349b570232d1f58630e382cbd857dd91 670 TIGRFAM TIGR03296 M6dom_TIGR03296: M6 family metalloprotease domain 111 421 8.9E-39 T 14-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 AMIS_70640 2ca113ba1c063858364e38522006bfc8 281 SMART SM01232 136 228 5.1E-41 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AMIS_70640 2ca113ba1c063858364e38522006bfc8 281 Gene3D G3DSA:3.20.190.10 2 129 7.8E-40 T 14-10-2018 IPR035937 MutM-like, N-terminal AMIS_70640 2ca113ba1c063858364e38522006bfc8 281 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 276 1.1E-90 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 AMIS_70640 2ca113ba1c063858364e38522006bfc8 281 SUPERFAMILY SSF46946 136 225 1.09E-26 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 AMIS_70640 2ca113ba1c063858364e38522006bfc8 281 Gene3D G3DSA:1.10.8.50 138 278 9.0E-45 T 14-10-2018 AMIS_70640 2ca113ba1c063858364e38522006bfc8 281 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 2 119 6.8E-35 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AMIS_70640 2ca113ba1c063858364e38522006bfc8 281 SUPERFAMILY SSF57716 228 277 2.08E-16 T 14-10-2018 AMIS_70640 2ca113ba1c063858364e38522006bfc8 281 SUPERFAMILY SSF81624 2 145 3.53E-37 T 14-10-2018 IPR035937 MutM-like, N-terminal AMIS_70640 2ca113ba1c063858364e38522006bfc8 281 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 136 223 1.2E-23 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AMIS_70640 2ca113ba1c063858364e38522006bfc8 281 SMART SM00898 2 121 1.7E-52 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AMIS_70640 2ca113ba1c063858364e38522006bfc8 281 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 277 41.561 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 AMIS_70640 2ca113ba1c063858364e38522006bfc8 281 Pfam PF06827 Zinc finger found in FPG and IleRS 250 278 1.7E-10 T 14-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 AMIS_54620 3c3babe9337ab4a11c46782cdb0515c0 809 SMART SM00316 646 717 4.7E-26 T 14-10-2018 IPR022967 RNA-binding domain, S1 AMIS_54620 3c3babe9337ab4a11c46782cdb0515c0 809 Gene3D G3DSA:1.10.3500.10 112 495 2.8E-150 T 14-10-2018 IPR023323 Tex-like domain superfamily AMIS_54620 3c3babe9337ab4a11c46782cdb0515c0 809 Gene3D G3DSA:1.10.150.310 496 627 2.0E-48 T 14-10-2018 AMIS_54620 3c3babe9337ab4a11c46782cdb0515c0 809 Pfam PF16921 Tex protein YqgF-like domain 323 448 2.1E-52 T 14-10-2018 IPR032639 Tex protein, YqgF-like domain AMIS_54620 3c3babe9337ab4a11c46782cdb0515c0 809 SMART SM00732 322 421 4.4E-40 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 AMIS_54620 3c3babe9337ab4a11c46782cdb0515c0 809 Gene3D G3DSA:2.40.50.140 628 722 4.2E-29 T 14-10-2018 AMIS_54620 3c3babe9337ab4a11c46782cdb0515c0 809 SUPERFAMILY SSF47781 467 555 4.11E-26 T 14-10-2018 IPR010994 RuvA domain 2-like AMIS_54620 3c3babe9337ab4a11c46782cdb0515c0 809 Pfam PF12836 Helix-hairpin-helix motif 488 552 5.9E-27 T 14-10-2018 AMIS_54620 3c3babe9337ab4a11c46782cdb0515c0 809 SUPERFAMILY SSF50249 635 719 1.42E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMIS_54620 3c3babe9337ab4a11c46782cdb0515c0 809 Gene3D G3DSA:3.30.420.140 321 448 2.8E-150 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 AMIS_54620 3c3babe9337ab4a11c46782cdb0515c0 809 Pfam PF00575 S1 RNA binding domain 647 717 2.4E-20 T 14-10-2018 IPR003029 S1 domain GO:0003676 AMIS_54620 3c3babe9337ab4a11c46782cdb0515c0 809 SUPERFAMILY SSF47781 557 628 2.05E-19 T 14-10-2018 IPR010994 RuvA domain 2-like AMIS_54620 3c3babe9337ab4a11c46782cdb0515c0 809 Pfam PF09371 Tex-like protein N-terminal domain 9 193 1.5E-67 T 14-10-2018 IPR018974 Tex-like protein, N-terminal AMIS_54620 3c3babe9337ab4a11c46782cdb0515c0 809 Gene3D G3DSA:1.10.10.650 2 109 1.2E-38 T 14-10-2018 IPR023319 Tex-like protein, HTH domain superfamily AMIS_54620 3c3babe9337ab4a11c46782cdb0515c0 809 SUPERFAMILY SSF158832 3 317 5.89E-116 T 14-10-2018 AMIS_54620 3c3babe9337ab4a11c46782cdb0515c0 809 SUPERFAMILY SSF53098 318 466 5.16E-51 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily AMIS_51330 84707540dbd6e2fe6a672297eadc8714 634 SUPERFAMILY SSF55486 427 517 4.81E-9 T 14-10-2018 AMIS_51330 84707540dbd6e2fe6a672297eadc8714 634 Gene3D G3DSA:3.40.390.10 403 537 1.1E-7 T 14-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 AMIS_62290 c4b7af83f04a2edffb99574d7350a07c 290 SUPERFAMILY SSF51735 108 283 2.76E-24 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_62290 c4b7af83f04a2edffb99574d7350a07c 290 SUPERFAMILY SSF53223 6 107 4.14E-25 T 14-10-2018 AMIS_62290 c4b7af83f04a2edffb99574d7350a07c 290 Gene3D G3DSA:3.40.50.720 108 259 1.9E-71 T 14-10-2018 AMIS_62290 c4b7af83f04a2edffb99574d7350a07c 290 Gene3D G3DSA:3.40.50.10860 11 272 1.9E-71 T 14-10-2018 AMIS_62290 c4b7af83f04a2edffb99574d7350a07c 290 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 12 94 2.7E-20 T 14-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AMIS_52820 836e48aeb494c2852ee223237107fb11 335 SUPERFAMILY SSF52540 3 275 1.18E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_52820 836e48aeb494c2852ee223237107fb11 335 Pfam PF13469 Sulfotransferase family 6 213 3.2E-42 T 14-10-2018 AMIS_52820 836e48aeb494c2852ee223237107fb11 335 Gene3D G3DSA:3.40.50.300 1 287 2.0E-63 T 14-10-2018 AMIS_79190 6faf55f231ef021e7eb40d480fd64007 217 Gene3D G3DSA:1.20.910.10 1 213 6.5E-63 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AMIS_79190 6faf55f231ef021e7eb40d480fd64007 217 SUPERFAMILY SSF48613 2 207 1.48E-55 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AMIS_79190 6faf55f231ef021e7eb40d480fd64007 217 Pfam PF01126 Heme oxygenase 3 203 2.7E-53 T 14-10-2018 IPR016053 Haem oxygenase-like GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|MetaCyc: PWY-5874|Reactome: R-HSA-189483|Reactome: R-HSA-917937 AMIS_79190 6faf55f231ef021e7eb40d480fd64007 217 PRINTS PR00088 Haem oxygenase signature 38 63 1.3E-27 T 14-10-2018 IPR002051 Haem oxygenase GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|MetaCyc: PWY-5874|Reactome: R-HSA-189483|Reactome: R-HSA-917937 AMIS_79190 6faf55f231ef021e7eb40d480fd64007 217 PRINTS PR00088 Haem oxygenase signature 116 137 1.3E-27 T 14-10-2018 IPR002051 Haem oxygenase GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|MetaCyc: PWY-5874|Reactome: R-HSA-189483|Reactome: R-HSA-917937 AMIS_79190 6faf55f231ef021e7eb40d480fd64007 217 PRINTS PR00088 Haem oxygenase signature 3 28 1.3E-27 T 14-10-2018 IPR002051 Haem oxygenase GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|MetaCyc: PWY-5874|Reactome: R-HSA-189483|Reactome: R-HSA-917937 AMIS_79190 6faf55f231ef021e7eb40d480fd64007 217 PRINTS PR00088 Haem oxygenase signature 63 88 1.3E-27 T 14-10-2018 IPR002051 Haem oxygenase GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|MetaCyc: PWY-5874|Reactome: R-HSA-189483|Reactome: R-HSA-917937 AMIS_79190 6faf55f231ef021e7eb40d480fd64007 217 PRINTS PR00088 Haem oxygenase signature 158 179 1.3E-27 T 14-10-2018 IPR002051 Haem oxygenase GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|MetaCyc: PWY-5874|Reactome: R-HSA-189483|Reactome: R-HSA-917937 AMIS_79190 6faf55f231ef021e7eb40d480fd64007 217 PRINTS PR00088 Haem oxygenase signature 190 208 1.3E-27 T 14-10-2018 IPR002051 Haem oxygenase GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|MetaCyc: PWY-5874|Reactome: R-HSA-189483|Reactome: R-HSA-917937 AMIS_79190 6faf55f231ef021e7eb40d480fd64007 217 PIRSF PIRSF000343 1 215 4.5E-58 T 14-10-2018 IPR002051 Haem oxygenase GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|MetaCyc: PWY-5874|Reactome: R-HSA-189483|Reactome: R-HSA-917937 AMIS_70940 5cc3ec5949c48ac4c00adeac3e3677dd 259 Gene3D G3DSA:4.10.520.10 1 98 7.2E-28 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AMIS_70940 5cc3ec5949c48ac4c00adeac3e3677dd 259 Pfam PF00216 Bacterial DNA-binding protein 1 88 1.4E-24 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AMIS_70940 5cc3ec5949c48ac4c00adeac3e3677dd 259 SUPERFAMILY SSF47729 1 90 3.53E-24 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AMIS_70940 5cc3ec5949c48ac4c00adeac3e3677dd 259 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 45 64 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AMIS_70940 5cc3ec5949c48ac4c00adeac3e3677dd 259 SMART SM00411 1 89 3.1E-35 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AMIS_70940 5cc3ec5949c48ac4c00adeac3e3677dd 259 PRINTS PR01727 Prokaryotic integration host factor signature 39 54 2.6E-13 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AMIS_70940 5cc3ec5949c48ac4c00adeac3e3677dd 259 PRINTS PR01727 Prokaryotic integration host factor signature 73 87 2.6E-13 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AMIS_70940 5cc3ec5949c48ac4c00adeac3e3677dd 259 PRINTS PR01727 Prokaryotic integration host factor signature 57 70 2.6E-13 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AMIS_29680 d7a265ab075721e57b7050f24de033fd 226 Pfam PF07729 FCD domain 92 206 3.5E-18 T 14-10-2018 IPR011711 GntR, C-terminal AMIS_29680 d7a265ab075721e57b7050f24de033fd 226 Gene3D G3DSA:1.20.120.530 83 209 1.8E-18 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AMIS_29680 d7a265ab075721e57b7050f24de033fd 226 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 7.7E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_29680 d7a265ab075721e57b7050f24de033fd 226 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 7.7E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_29680 d7a265ab075721e57b7050f24de033fd 226 SMART SM00345 19 77 1.7E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_29680 d7a265ab075721e57b7050f24de033fd 226 SMART SM00895 87 210 1.5E-9 T 14-10-2018 IPR011711 GntR, C-terminal AMIS_29680 d7a265ab075721e57b7050f24de033fd 226 Gene3D G3DSA:1.10.10.10 12 78 9.5E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_29680 d7a265ab075721e57b7050f24de033fd 226 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 48 67 9.9E-6 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMIS_29680 d7a265ab075721e57b7050f24de033fd 226 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 37 48 9.9E-6 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMIS_29680 d7a265ab075721e57b7050f24de033fd 226 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 77 6.4E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_29680 d7a265ab075721e57b7050f24de033fd 226 SUPERFAMILY SSF48008 95 207 6.02E-16 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AMIS_29680 d7a265ab075721e57b7050f24de033fd 226 SUPERFAMILY SSF46785 11 81 5.6E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_50900 e9e3628d09a4a3083918d57eb90d50b2 475 Gene3D G3DSA:3.40.50.2000 419 456 9.2E-7 T 14-10-2018 AMIS_50900 e9e3628d09a4a3083918d57eb90d50b2 475 SUPERFAMILY SSF53756 228 473 9.16E-44 T 14-10-2018 AMIS_50900 e9e3628d09a4a3083918d57eb90d50b2 475 Gene3D G3DSA:3.40.50.2000 236 351 5.6E-28 T 14-10-2018 AMIS_50900 e9e3628d09a4a3083918d57eb90d50b2 475 Pfam PF13692 Glycosyl transferases group 1 249 353 2.4E-20 T 14-10-2018 AMIS_50900 e9e3628d09a4a3083918d57eb90d50b2 475 Gene3D G3DSA:3.40.50.2000 220 235 5.6E-28 T 14-10-2018 AMIS_50900 e9e3628d09a4a3083918d57eb90d50b2 475 Gene3D G3DSA:3.40.50.2000 457 471 9.2E-7 T 14-10-2018 AMIS_24220 70e4e376c8d633e04338cff37fa70ec7 351 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 317 329 1.9E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_24220 70e4e376c8d633e04338cff37fa70ec7 351 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 301 317 1.9E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_24220 70e4e376c8d633e04338cff37fa70ec7 351 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 287 301 1.9E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_24220 70e4e376c8d633e04338cff37fa70ec7 351 Gene3D G3DSA:3.40.50.1820 10 275 4.6E-37 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_24220 70e4e376c8d633e04338cff37fa70ec7 351 Pfam PF00561 alpha/beta hydrolase fold 57 151 9.6E-11 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_24220 70e4e376c8d633e04338cff37fa70ec7 351 PRINTS PR00111 Alpha/beta hydrolase fold signature 219 233 1.2E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_24220 70e4e376c8d633e04338cff37fa70ec7 351 PRINTS PR00111 Alpha/beta hydrolase fold signature 121 134 1.2E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_24220 70e4e376c8d633e04338cff37fa70ec7 351 PRINTS PR00111 Alpha/beta hydrolase fold signature 61 76 1.2E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_24220 70e4e376c8d633e04338cff37fa70ec7 351 Pfam PF00196 Bacterial regulatory proteins, luxR family 287 341 8.6E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_24220 70e4e376c8d633e04338cff37fa70ec7 351 SUPERFAMILY SSF46894 281 343 1.63E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_24220 70e4e376c8d633e04338cff37fa70ec7 351 ProSitePatterns PS00622 LuxR-type HTH domain signature. 301 328 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_24220 70e4e376c8d633e04338cff37fa70ec7 351 SMART SM00421 284 341 3.0E-24 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_24220 70e4e376c8d633e04338cff37fa70ec7 351 Gene3D G3DSA:1.10.10.10 277 350 1.7E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_24220 70e4e376c8d633e04338cff37fa70ec7 351 SUPERFAMILY SSF53474 12 273 7.0E-36 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_29230 e651ecb97cd98f9845d879b59312212b 317 SUPERFAMILY SSF81345 2 312 3.01E-67 T 14-10-2018 IPR037294 ABC transporter, BtuC-like AMIS_29230 e651ecb97cd98f9845d879b59312212b 317 Gene3D G3DSA:1.10.3470.10 1 316 1.6E-81 T 14-10-2018 IPR037294 ABC transporter, BtuC-like AMIS_29230 e651ecb97cd98f9845d879b59312212b 317 Pfam PF01032 FecCD transport family 2 311 2.6E-80 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AMIS_9810 b047fc34292a946cedf4868bb8844185 311 Gene3D G3DSA:1.25.40.10 9 185 4.1E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_9810 b047fc34292a946cedf4868bb8844185 311 SUPERFAMILY SSF103642 289 308 1.8E-6 T 14-10-2018 AMIS_9810 b047fc34292a946cedf4868bb8844185 311 Pfam PF02810 SEC-C motif 290 308 4.7E-9 T 14-10-2018 IPR004027 SEC-C motif AMIS_9810 b047fc34292a946cedf4868bb8844185 311 Gene3D G3DSA:3.10.450.50 265 308 7.7E-7 T 14-10-2018 AMIS_9810 b047fc34292a946cedf4868bb8844185 311 SUPERFAMILY SSF48452 37 145 1.99E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_47160 c8a8fcfe58f97a7922f04e199d846bbb 347 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 14-10-2018 AMIS_47160 c8a8fcfe58f97a7922f04e199d846bbb 347 SUPERFAMILY SSF53822 63 343 8.88E-62 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_47160 c8a8fcfe58f97a7922f04e199d846bbb 347 SUPERFAMILY SSF47413 3 60 2.51E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_47160 c8a8fcfe58f97a7922f04e199d846bbb 347 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 1.7E-14 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_47160 c8a8fcfe58f97a7922f04e199d846bbb 347 SMART SM00354 2 72 1.0E-24 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_47160 c8a8fcfe58f97a7922f04e199d846bbb 347 Gene3D G3DSA:3.40.50.2300 61 312 5.2E-74 T 14-10-2018 AMIS_47160 c8a8fcfe58f97a7922f04e199d846bbb 347 Pfam PF13377 Periplasmic binding protein-like domain 168 340 2.5E-33 T 14-10-2018 AMIS_47160 c8a8fcfe58f97a7922f04e199d846bbb 347 Gene3D G3DSA:1.10.260.40 1 60 2.3E-20 T 14-10-2018 AMIS_47160 c8a8fcfe58f97a7922f04e199d846bbb 347 Gene3D G3DSA:3.40.50.2300 159 293 5.2E-74 T 14-10-2018 AMIS_7240 3a63e3836393489dae1950eeda9e4357 405 TIGRFAM TIGR00127 nadp_idh_euk: isocitrate dehydrogenase, NADP-dependent 3 404 4.6E-208 T 14-10-2018 IPR004790 Isocitrate dehydrogenase NADP-dependent GO:0004450|GO:0006102|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 AMIS_7240 3a63e3836393489dae1950eeda9e4357 405 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 270 289 - T 14-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 AMIS_7240 3a63e3836393489dae1950eeda9e4357 405 Gene3D G3DSA:3.40.718.10 1 405 8.6E-216 T 14-10-2018 AMIS_7240 3a63e3836393489dae1950eeda9e4357 405 SUPERFAMILY SSF53659 1 403 1.77E-152 T 14-10-2018 AMIS_7240 3a63e3836393489dae1950eeda9e4357 405 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 394 3.7E-70 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AMIS_7240 3a63e3836393489dae1950eeda9e4357 405 SMART SM01329 9 395 1.5E-133 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AMIS_7240 3a63e3836393489dae1950eeda9e4357 405 PIRSF PIRSF000108 1 405 2.5E-222 T 14-10-2018 IPR004790 Isocitrate dehydrogenase NADP-dependent GO:0004450|GO:0006102|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 AMIS_56240 33701fcd4603978cf2a9119f993b90d7 330 TIGRFAM TIGR02363 dhaK1: dihydroxyacetone kinase, DhaK subunit 1 324 1.6E-141 T 14-10-2018 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 KEGG: 00561+2.7.1.121 AMIS_56240 33701fcd4603978cf2a9119f993b90d7 330 Pfam PF02733 Dak1 domain 18 324 4.5E-128 T 14-10-2018 IPR004006 DhaK domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 AMIS_56240 33701fcd4603978cf2a9119f993b90d7 330 Gene3D G3DSA:3.40.50.10440 11 183 5.9E-67 T 14-10-2018 AMIS_56240 33701fcd4603978cf2a9119f993b90d7 330 SUPERFAMILY SSF82549 10 329 1.2E-116 T 14-10-2018 AMIS_56240 33701fcd4603978cf2a9119f993b90d7 330 Gene3D G3DSA:3.30.1180.20 184 330 3.3E-48 T 14-10-2018 AMIS_44860 8f578e1121e33c7044bc333263424d7b 291 SUPERFAMILY SSF51197 13 287 1.05E-83 T 14-10-2018 AMIS_44860 8f578e1121e33c7044bc333263424d7b 291 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 15 280 8.2E-58 T 14-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 AMIS_44860 8f578e1121e33c7044bc333263424d7b 291 Gene3D G3DSA:3.60.130.10 7 291 7.8E-89 T 14-10-2018 AMIS_77630 2d49df07548d2f0703e694c1993fb09f 169 Gene3D G3DSA:3.90.1140.10 7 159 4.8E-8 T 14-10-2018 AMIS_77630 2d49df07548d2f0703e694c1993fb09f 169 Pfam PF13563 2'-5' RNA ligase superfamily 35 161 8.6E-10 T 14-10-2018 AMIS_77630 2d49df07548d2f0703e694c1993fb09f 169 SUPERFAMILY SSF55144 4 142 1.65E-11 T 14-10-2018 IPR009097 Cyclic phosphodiesterase AMIS_32600 6389d3e67afcc90797837ffbb22c6914 385 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 130 221 1.4E-24 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMIS_32600 6389d3e67afcc90797837ffbb22c6914 385 Gene3D G3DSA:1.10.540.10 1 128 5.3E-31 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMIS_32600 6389d3e67afcc90797837ffbb22c6914 385 Gene3D G3DSA:1.20.140.10 239 384 4.6E-43 T 14-10-2018 AMIS_32600 6389d3e67afcc90797837ffbb22c6914 385 SUPERFAMILY SSF47203 231 382 7.09E-47 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMIS_32600 6389d3e67afcc90797837ffbb22c6914 385 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 340 359 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AMIS_32600 6389d3e67afcc90797837ffbb22c6914 385 SUPERFAMILY SSF56645 3 244 2.62E-75 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMIS_32600 6389d3e67afcc90797837ffbb22c6914 385 Gene3D G3DSA:2.40.110.10 129 238 2.7E-38 T 14-10-2018 AMIS_32600 6389d3e67afcc90797837ffbb22c6914 385 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 233 381 8.2E-42 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMIS_32600 6389d3e67afcc90797837ffbb22c6914 385 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 13 126 2.7E-29 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMIS_75000 de62857342b4a828cef5432bb5b61d06 199 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 23 36 - T 14-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 AMIS_75000 de62857342b4a828cef5432bb5b61d06 199 Gene3D G3DSA:3.40.50.1470 8 199 2.4E-66 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 AMIS_75000 de62857342b4a828cef5432bb5b61d06 199 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 10 190 33.647 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AMIS_75000 de62857342b4a828cef5432bb5b61d06 199 SUPERFAMILY SSF53178 10 197 2.35E-64 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 AMIS_75000 de62857342b4a828cef5432bb5b61d06 199 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 12 197 5.9E-56 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AMIS_75000 de62857342b4a828cef5432bb5b61d06 199 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 119 129 - T 14-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 AMIS_75000 de62857342b4a828cef5432bb5b61d06 199 Pfam PF01195 Peptidyl-tRNA hydrolase 12 196 1.1E-55 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AMIS_36990 c952ae26b5e07a158db2a2d6dbe69537 791 SUPERFAMILY SSF52540 14 449 4.72E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_36990 c952ae26b5e07a158db2a2d6dbe69537 791 Gene3D G3DSA:1.10.8.280 181 289 5.4E-151 T 14-10-2018 AMIS_36990 c952ae26b5e07a158db2a2d6dbe69537 791 Pfam PF00005 ABC transporter 498 705 4.5E-11 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_36990 c952ae26b5e07a158db2a2d6dbe69537 791 Gene3D G3DSA:3.40.50.300 15 468 5.4E-151 T 14-10-2018 AMIS_36990 c952ae26b5e07a158db2a2d6dbe69537 791 Gene3D G3DSA:1.20.1580.10 574 612 1.2E-101 T 14-10-2018 AMIS_36990 c952ae26b5e07a158db2a2d6dbe69537 791 Gene3D G3DSA:3.40.50.300 492 781 1.2E-101 T 14-10-2018 AMIS_36990 c952ae26b5e07a158db2a2d6dbe69537 791 Gene3D G3DSA:1.20.1580.10 101 367 5.4E-151 T 14-10-2018 AMIS_36990 c952ae26b5e07a158db2a2d6dbe69537 791 SUPERFAMILY SSF52540 490 758 4.97E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_27130 93241e782411b16bb337fa416a13cea8 705 Gene3D G3DSA:3.30.470.20 496 702 3.6E-63 T 14-10-2018 AMIS_27130 93241e782411b16bb337fa416a13cea8 705 Gene3D G3DSA:3.40.50.261 299 445 2.2E-22 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AMIS_27130 93241e782411b16bb337fa416a13cea8 705 SUPERFAMILY SSF51735 9 132 7.43E-29 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_27130 93241e782411b16bb337fa416a13cea8 705 Pfam PF13549 ATP-grasp domain 494 702 2.3E-54 T 14-10-2018 AMIS_27130 93241e782411b16bb337fa416a13cea8 705 Pfam PF13380 CoA binding domain 13 135 2.1E-14 T 14-10-2018 IPR003781 CoA-binding GO:0048037 AMIS_27130 93241e782411b16bb337fa416a13cea8 705 SUPERFAMILY SSF56059 496 703 5.66E-37 T 14-10-2018 AMIS_27130 93241e782411b16bb337fa416a13cea8 705 Gene3D G3DSA:3.30.1490.20 513 587 3.6E-63 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AMIS_27130 93241e782411b16bb337fa416a13cea8 705 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 156 293 4.8E-46 T 14-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain AMIS_27130 93241e782411b16bb337fa416a13cea8 705 Gene3D G3DSA:3.40.50.261 135 297 6.6E-48 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AMIS_27130 93241e782411b16bb337fa416a13cea8 705 SMART SM00881 9 103 6.5E-28 T 14-10-2018 IPR003781 CoA-binding GO:0048037 AMIS_27130 93241e782411b16bb337fa416a13cea8 705 SUPERFAMILY SSF52210 136 296 1.57E-37 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AMIS_27130 93241e782411b16bb337fa416a13cea8 705 Gene3D G3DSA:3.40.50.720 4 132 8.0E-35 T 14-10-2018 AMIS_27130 93241e782411b16bb337fa416a13cea8 705 SUPERFAMILY SSF52210 301 511 1.01E-19 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AMIS_79290 4a8650bcc1c5086586fce41ddcfda9f4 755 Pfam PF00732 GMC oxidoreductase 15 282 7.5E-10 T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AMIS_79290 4a8650bcc1c5086586fce41ddcfda9f4 755 Pfam PF05199 GMC oxidoreductase 467 524 1.5E-18 T 14-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 AMIS_79290 4a8650bcc1c5086586fce41ddcfda9f4 755 SUPERFAMILY SSF51905 13 531 8.61E-51 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_6910 d27a16364f0feaf6d1dc05e3ff0f80cf 495 SMART SM01240 11 481 0.0 T 14-10-2018 AMIS_6910 d27a16364f0feaf6d1dc05e3ff0f80cf 495 PIRSF PIRSF000130 2 495 2.2E-203 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 AMIS_6910 d27a16364f0feaf6d1dc05e3ff0f80cf 495 SUPERFAMILY SSF54631 67 206 1.25E-29 T 14-10-2018 AMIS_6910 d27a16364f0feaf6d1dc05e3ff0f80cf 495 Pfam PF00571 CBS domain 153 205 4.5E-5 T 14-10-2018 IPR000644 CBS domain AMIS_6910 d27a16364f0feaf6d1dc05e3ff0f80cf 495 Pfam PF00571 CBS domain 97 143 3.3E-8 T 14-10-2018 IPR000644 CBS domain AMIS_6910 d27a16364f0feaf6d1dc05e3ff0f80cf 495 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 12 481 1.9E-157 T 14-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 AMIS_6910 d27a16364f0feaf6d1dc05e3ff0f80cf 495 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 12 494 83.852 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 AMIS_6910 d27a16364f0feaf6d1dc05e3ff0f80cf 495 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 12 463 1.5E-186 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 AMIS_6910 d27a16364f0feaf6d1dc05e3ff0f80cf 495 Gene3D G3DSA:3.20.20.70 3 494 2.8E-210 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_6910 d27a16364f0feaf6d1dc05e3ff0f80cf 495 SMART SM00116 100 148 1.1E-9 T 14-10-2018 IPR000644 CBS domain AMIS_6910 d27a16364f0feaf6d1dc05e3ff0f80cf 495 SMART SM00116 161 209 7.6E-4 T 14-10-2018 IPR000644 CBS domain AMIS_6910 d27a16364f0feaf6d1dc05e3ff0f80cf 495 SUPERFAMILY SSF51412 8 485 1.57E-119 T 14-10-2018 AMIS_8480 4aa41dd5ac38168b969f5769584213e3 645 Gene3D G3DSA:3.30.300.30 513 638 3.0E-11 T 14-10-2018 AMIS_8480 4aa41dd5ac38168b969f5769584213e3 645 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 40 95 2.4E-13 T 14-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 AMIS_8480 4aa41dd5ac38168b969f5769584213e3 645 ProSitePatterns PS00455 Putative AMP-binding domain signature. 263 274 - T 14-10-2018 IPR020845 AMP-binding, conserved site AMIS_8480 4aa41dd5ac38168b969f5769584213e3 645 TIGRFAM TIGR01217 ac_ac_CoA_syn: acetoacetate-CoA ligase 7 644 6.7E-239 T 14-10-2018 IPR005914 Acetoacetyl-CoA synthase GO:0006629|GO:0030729 KEGG: 00280+6.2.1.16|KEGG: 00650+6.2.1.16|Reactome: R-HSA-77111 AMIS_8480 4aa41dd5ac38168b969f5769584213e3 645 Gene3D G3DSA:3.40.50.12780 76 510 1.4E-61 T 14-10-2018 AMIS_8480 4aa41dd5ac38168b969f5769584213e3 645 Pfam PF00501 AMP-binding enzyme 108 515 1.3E-49 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMIS_8480 4aa41dd5ac38168b969f5769584213e3 645 Pfam PF13193 AMP-binding enzyme C-terminal domain 528 604 3.3E-5 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AMIS_8480 4aa41dd5ac38168b969f5769584213e3 645 SUPERFAMILY SSF56801 39 619 2.62E-119 T 14-10-2018 AMIS_36200 8937f6c59cef29ef49461ebad6b5e1ba 366 Gene3D G3DSA:3.20.20.120 116 345 3.8E-123 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AMIS_36200 8937f6c59cef29ef49461ebad6b5e1ba 366 TIGRFAM TIGR01928 menC_lowGC/arch: o-succinylbenzoate synthase 8 331 4.8E-92 T 14-10-2018 IPR010197 o-Succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 AMIS_36200 8937f6c59cef29ef49461ebad6b5e1ba 366 Pfam PF13378 Enolase C-terminal domain-like 144 351 1.5E-45 T 14-10-2018 IPR029065 Enolase C-terminal domain-like AMIS_36200 8937f6c59cef29ef49461ebad6b5e1ba 366 SUPERFAMILY SSF51604 114 362 2.23E-63 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AMIS_36200 8937f6c59cef29ef49461ebad6b5e1ba 366 SMART SM00922 141 233 4.0E-20 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AMIS_36200 8937f6c59cef29ef49461ebad6b5e1ba 366 SUPERFAMILY SSF54826 2 124 3.54E-28 T 14-10-2018 AMIS_36200 8937f6c59cef29ef49461ebad6b5e1ba 366 Hamap MF_01933 o-succinylbenzoate synthase [menC]. 2 363 37.758 T 14-10-2018 IPR010197 o-Succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 AMIS_36200 8937f6c59cef29ef49461ebad6b5e1ba 366 Gene3D G3DSA:3.30.390.10 10 353 3.8E-123 T 14-10-2018 IPR029017 Enolase-like, N-terminal AMIS_36200 8937f6c59cef29ef49461ebad6b5e1ba 366 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 16 123 2.9E-8 T 14-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AMIS_70250 351042aa58d9980fa1dc2fe7ed201bb0 189 Pfam PF05239 PRC-barrel domain 114 187 5.4E-6 T 14-10-2018 IPR027275 PRC-barrel domain AMIS_70250 351042aa58d9980fa1dc2fe7ed201bb0 189 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 66 186 4.2E-27 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 AMIS_70250 351042aa58d9980fa1dc2fe7ed201bb0 189 SUPERFAMILY SSF50346 116 186 7.06E-15 T 14-10-2018 IPR011033 PRC-barrel-like superfamily AMIS_70250 351042aa58d9980fa1dc2fe7ed201bb0 189 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 2 186 22.829 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 AMIS_70250 351042aa58d9980fa1dc2fe7ed201bb0 189 SUPERFAMILY SSF50447 3 107 7.77E-17 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AMIS_70250 351042aa58d9980fa1dc2fe7ed201bb0 189 Pfam PF01782 RimM N-terminal domain 4 105 2.1E-23 T 14-10-2018 IPR002676 RimM, N-terminal GO:0006364 AMIS_70250 351042aa58d9980fa1dc2fe7ed201bb0 189 Gene3D G3DSA:2.30.30.240 112 189 9.9E-12 T 14-10-2018 AMIS_70250 351042aa58d9980fa1dc2fe7ed201bb0 189 Gene3D G3DSA:2.40.30.60 2 109 7.5E-22 T 14-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 AMIS_9050 20d092eac1818335d8806d9978746e0b 372 SUPERFAMILY SSF52540 20 357 1.02E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_9050 20d092eac1818335d8806d9978746e0b 372 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 213 227 - T 14-10-2018 IPR001482 Type II/IV secretion system protein AMIS_9050 20d092eac1818335d8806d9978746e0b 372 Gene3D G3DSA:3.40.50.300 121 371 1.5E-97 T 14-10-2018 AMIS_9050 20d092eac1818335d8806d9978746e0b 372 Gene3D G3DSA:3.30.450.90 12 120 2.8E-30 T 14-10-2018 AMIS_9050 20d092eac1818335d8806d9978746e0b 372 SMART SM00382 142 267 7.6E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_9050 20d092eac1818335d8806d9978746e0b 372 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 22 364 1.5E-143 T 14-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 AMIS_9050 20d092eac1818335d8806d9978746e0b 372 Pfam PF00437 Type II/IV secretion system protein 132 281 1.4E-40 T 14-10-2018 IPR001482 Type II/IV secretion system protein AMIS_34150 035c48deedb1f4be00ab83cb962bdace 752 Gene3D G3DSA:3.20.20.450 480 739 5.5E-88 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_34150 035c48deedb1f4be00ab83cb962bdace 752 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 317 468 3.9E-28 T 14-10-2018 IPR000160 GGDEF domain AMIS_34150 035c48deedb1f4be00ab83cb962bdace 752 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 190 314 2.2E-8 T 14-10-2018 IPR000014 PAS domain AMIS_34150 035c48deedb1f4be00ab83cb962bdace 752 SMART SM00052 479 726 1.8E-95 T 14-10-2018 IPR001633 EAL domain AMIS_34150 035c48deedb1f4be00ab83cb962bdace 752 Gene3D G3DSA:3.30.450.20 179 305 1.5E-12 T 14-10-2018 AMIS_34150 035c48deedb1f4be00ab83cb962bdace 752 Gene3D G3DSA:3.30.70.270 306 471 2.7E-42 T 14-10-2018 AMIS_34150 035c48deedb1f4be00ab83cb962bdace 752 Pfam PF08448 PAS fold 199 308 1.1E-7 T 14-10-2018 IPR013656 PAS fold-4 AMIS_34150 035c48deedb1f4be00ab83cb962bdace 752 SMART SM00086 265 307 3.6E-4 T 14-10-2018 IPR001610 PAC motif AMIS_34150 035c48deedb1f4be00ab83cb962bdace 752 Pfam PF00563 EAL domain 485 721 1.1E-66 T 14-10-2018 IPR001633 EAL domain AMIS_34150 035c48deedb1f4be00ab83cb962bdace 752 SUPERFAMILY SSF141868 487 732 3.27E-79 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_34150 035c48deedb1f4be00ab83cb962bdace 752 SMART SM00267 307 469 1.8E-49 T 14-10-2018 IPR000160 GGDEF domain AMIS_34150 035c48deedb1f4be00ab83cb962bdace 752 Pfam PF00990 Diguanylate cyclase, GGDEF domain 319 465 8.2E-32 T 14-10-2018 IPR000160 GGDEF domain AMIS_34150 035c48deedb1f4be00ab83cb962bdace 752 SUPERFAMILY SSF55785 182 305 1.54E-14 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_34150 035c48deedb1f4be00ab83cb962bdace 752 SUPERFAMILY SSF55073 323 471 6.75E-35 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_54220 87658119da1588f9e2935f77570e0eb8 612 Gene3D G3DSA:3.30.450.20 294 422 3.4E-13 T 14-10-2018 AMIS_54220 87658119da1588f9e2935f77570e0eb8 612 Pfam PF03705 CheR methyltransferase, all-alpha domain 8 58 1.3E-16 T 14-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AMIS_54220 87658119da1588f9e2935f77570e0eb8 612 Pfam PF01739 CheR methyltransferase, SAM binding domain 71 261 4.2E-52 T 14-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal AMIS_54220 87658119da1588f9e2935f77570e0eb8 612 SMART SM00138 5 266 2.6E-81 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMIS_54220 87658119da1588f9e2935f77570e0eb8 612 Pfam PF08448 PAS fold 301 410 4.3E-6 T 14-10-2018 IPR013656 PAS fold-4 AMIS_54220 87658119da1588f9e2935f77570e0eb8 612 PRINTS PR00996 Glutamate methyltransferase family signature 140 156 7.5E-30 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMIS_54220 87658119da1588f9e2935f77570e0eb8 612 PRINTS PR00996 Glutamate methyltransferase family signature 27 40 7.5E-30 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMIS_54220 87658119da1588f9e2935f77570e0eb8 612 PRINTS PR00996 Glutamate methyltransferase family signature 64 76 7.5E-30 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMIS_54220 87658119da1588f9e2935f77570e0eb8 612 PRINTS PR00996 Glutamate methyltransferase family signature 206 220 7.5E-30 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMIS_54220 87658119da1588f9e2935f77570e0eb8 612 PRINTS PR00996 Glutamate methyltransferase family signature 104 124 7.5E-30 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMIS_54220 87658119da1588f9e2935f77570e0eb8 612 PRINTS PR00996 Glutamate methyltransferase family signature 225 248 7.5E-30 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMIS_54220 87658119da1588f9e2935f77570e0eb8 612 Gene3D G3DSA:3.40.50.150 70 268 3.9E-58 T 14-10-2018 AMIS_54220 87658119da1588f9e2935f77570e0eb8 612 SUPERFAMILY SSF53335 71 265 1.88E-43 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_54220 87658119da1588f9e2935f77570e0eb8 612 Pfam PF13188 PAS domain 498 543 2.0E-7 T 14-10-2018 IPR000014 PAS domain AMIS_54220 87658119da1588f9e2935f77570e0eb8 612 SMART SM00091 497 563 0.0013 T 14-10-2018 IPR000014 PAS domain AMIS_54220 87658119da1588f9e2935f77570e0eb8 612 SMART SM00091 295 360 28.0 T 14-10-2018 IPR000014 PAS domain AMIS_54220 87658119da1588f9e2935f77570e0eb8 612 SUPERFAMILY SSF55785 297 406 1.48E-9 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_54220 87658119da1588f9e2935f77570e0eb8 612 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 498 596 2.5E-8 T 14-10-2018 IPR000014 PAS domain AMIS_54220 87658119da1588f9e2935f77570e0eb8 612 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 295 413 8.6E-8 T 14-10-2018 IPR000014 PAS domain AMIS_54220 87658119da1588f9e2935f77570e0eb8 612 Gene3D G3DSA:3.30.450.20 449 610 7.8E-13 T 14-10-2018 AMIS_54220 87658119da1588f9e2935f77570e0eb8 612 SUPERFAMILY SSF47757 5 73 1.83E-13 T 14-10-2018 AMIS_54220 87658119da1588f9e2935f77570e0eb8 612 SUPERFAMILY SSF55785 485 600 3.14E-15 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_22000 3e7b89104c5097da40fb743009fde527 566 SUPERFAMILY SSF56645 12 231 9.42E-27 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMIS_22000 3e7b89104c5097da40fb743009fde527 566 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 238 385 8.4E-18 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMIS_22000 3e7b89104c5097da40fb743009fde527 566 SUPERFAMILY SSF47203 237 394 1.26E-26 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMIS_22000 3e7b89104c5097da40fb743009fde527 566 Gene3D G3DSA:2.40.110.10 129 240 2.2E-10 T 14-10-2018 AMIS_22000 3e7b89104c5097da40fb743009fde527 566 Gene3D G3DSA:1.20.140.10 241 393 5.8E-21 T 14-10-2018 AMIS_13090 009feb41e9c922af2a652f7b575a3d7b 316 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 225 314 2.3E-28 T 14-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AMIS_13090 009feb41e9c922af2a652f7b575a3d7b 316 SUPERFAMILY SSF53901 5 315 3.89E-63 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_13090 009feb41e9c922af2a652f7b575a3d7b 316 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 5 314 2.7E-93 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AMIS_13090 009feb41e9c922af2a652f7b575a3d7b 316 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 3 315 58.592 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AMIS_13090 009feb41e9c922af2a652f7b575a3d7b 316 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 107 183 2.7E-27 T 14-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AMIS_13090 009feb41e9c922af2a652f7b575a3d7b 316 Gene3D G3DSA:3.40.47.10 2 316 4.7E-102 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_13490 693202b423c4c6d4e6491e1751cd9313 599 Pfam PF00795 Carbon-nitrogen hydrolase 5 266 1.1E-28 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 AMIS_13490 693202b423c4c6d4e6491e1751cd9313 599 SUPERFAMILY SSF56317 1 262 1.23E-60 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AMIS_13490 693202b423c4c6d4e6491e1751cd9313 599 Gene3D G3DSA:3.40.50.620 319 596 2.4E-111 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMIS_13490 693202b423c4c6d4e6491e1751cd9313 599 SUPERFAMILY SSF52402 315 576 3.96E-76 T 14-10-2018 AMIS_13490 693202b423c4c6d4e6491e1751cd9313 599 PIRSF PIRSF006630 1 596 1.4E-203 T 14-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 AMIS_13490 693202b423c4c6d4e6491e1751cd9313 599 Hamap MF_02090 Glutamine-dependent NAD(+) synthetase [nadE]. 4 594 29.52 T 14-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 AMIS_13490 693202b423c4c6d4e6491e1751cd9313 599 TIGRFAM TIGR00552 nadE: NAD+ synthetase 329 571 1.1E-58 T 14-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 AMIS_13490 693202b423c4c6d4e6491e1751cd9313 599 Gene3D G3DSA:3.60.110.10 2 295 5.0E-101 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AMIS_13490 693202b423c4c6d4e6491e1751cd9313 599 ProSitePatterns PS00920 Nitrilases / cyanide hydratase signature 1. 36 51 - T 14-10-2018 IPR000132 Nitrilase/cyanide hydratase, conserved site GO:0016810 AMIS_13490 693202b423c4c6d4e6491e1751cd9313 599 Pfam PF02540 NAD synthase 322 568 4.2E-69 T 14-10-2018 IPR022310 NAD/GMP synthase AMIS_37750 5868450fbfca324f034b107f098fb2e2 439 SUPERFAMILY SSF53850 20 437 1.89E-68 T 14-10-2018 AMIS_37750 5868450fbfca324f034b107f098fb2e2 439 Gene3D G3DSA:3.40.190.10 155 428 1.4E-115 T 14-10-2018 AMIS_37750 5868450fbfca324f034b107f098fb2e2 439 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 1 24 5.3E-5 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AMIS_37750 5868450fbfca324f034b107f098fb2e2 439 Gene3D G3DSA:3.40.190.10 69 398 1.4E-115 T 14-10-2018 AMIS_37750 5868450fbfca324f034b107f098fb2e2 439 Pfam PF01547 Bacterial extracellular solute-binding protein 51 355 3.8E-35 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein AMIS_57650 d60fd51812d26b161e8009ac9b578cd0 456 Gene3D G3DSA:3.40.190.10 77 376 2.1E-109 T 14-10-2018 AMIS_57650 d60fd51812d26b161e8009ac9b578cd0 456 SUPERFAMILY SSF53850 63 442 7.41E-68 T 14-10-2018 AMIS_57650 d60fd51812d26b161e8009ac9b578cd0 456 Gene3D G3DSA:3.40.190.10 171 437 2.1E-109 T 14-10-2018 AMIS_57650 d60fd51812d26b161e8009ac9b578cd0 456 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 167 184 - T 14-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 AMIS_57650 d60fd51812d26b161e8009ac9b578cd0 456 Pfam PF01547 Bacterial extracellular solute-binding protein 71 356 6.1E-36 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein AMIS_35240 5513b66bca6bf1c5882dfefe5857b46b 59 Pfam PF14013 MT0933-like antitoxin protein 4 51 1.9E-18 T 14-10-2018 IPR028037 Antitoxin Rv0909/MT0933 AMIS_16440 d432e1962b6f9f5869803ce1aeb53f07 642 SMART SM00382 407 599 2.4E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_16440 d432e1962b6f9f5869803ce1aeb53f07 642 Gene3D G3DSA:1.20.1560.10 9 348 2.2E-79 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMIS_16440 d432e1962b6f9f5869803ce1aeb53f07 642 ProSitePatterns PS00211 ABC transporters family signature. 519 533 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_16440 d432e1962b6f9f5869803ce1aeb53f07 642 Gene3D G3DSA:3.40.50.300 355 620 2.4E-87 T 14-10-2018 AMIS_16440 d432e1962b6f9f5869803ce1aeb53f07 642 Pfam PF00664 ABC transporter transmembrane region 43 317 1.2E-42 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AMIS_16440 d432e1962b6f9f5869803ce1aeb53f07 642 SUPERFAMILY SSF90123 29 351 7.98E-73 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMIS_16440 d432e1962b6f9f5869803ce1aeb53f07 642 SUPERFAMILY SSF52540 353 618 1.7E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_16440 d432e1962b6f9f5869803ce1aeb53f07 642 Pfam PF00005 ABC transporter 398 547 8.7E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_57540 4a82a169d5e9e3949af2e1239d6d9ad9 535 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 479 495 - T 14-10-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 AMIS_57540 4a82a169d5e9e3949af2e1239d6d9ad9 535 Pfam PF00939 Sodium:sulfate symporter transmembrane region 50 524 2.7E-72 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AMIS_57540 4a82a169d5e9e3949af2e1239d6d9ad9 535 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 64 525 1.4E-78 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AMIS_11800 8f0ad96c764792323d6b6126f0258973 465 Gene3D G3DSA:3.40.710.10 5 305 1.4E-63 T 14-10-2018 AMIS_11800 8f0ad96c764792323d6b6126f0258973 465 SUPERFAMILY SSF56601 8 303 4.67E-61 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMIS_11800 8f0ad96c764792323d6b6126f0258973 465 Pfam PF00144 Beta-lactamase 10 301 1.1E-50 T 14-10-2018 IPR001466 Beta-lactamase-related AMIS_79000 42fe1be30cac39599f822a932e53eb0d 277 SMART SM00495 230 277 2.9E-5 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AMIS_79000 42fe1be30cac39599f822a932e53eb0d 277 Gene3D G3DSA:2.10.10.20 233 275 2.2E-17 T 14-10-2018 AMIS_79000 42fe1be30cac39599f822a932e53eb0d 277 SUPERFAMILY SSF81296 29 170 6.3E-34 T 14-10-2018 IPR014756 Immunoglobulin E-set AMIS_79000 42fe1be30cac39599f822a932e53eb0d 277 SUPERFAMILY SSF51055 232 274 3.79E-11 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AMIS_79000 42fe1be30cac39599f822a932e53eb0d 277 Gene3D G3DSA:2.70.50.50 29 170 1.3E-47 T 14-10-2018 AMIS_79000 42fe1be30cac39599f822a932e53eb0d 277 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 29 167 1.0E-15 T 14-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal AMIS_69210 2dc2f46467a0e5173f504d51ebae2f36 264 SUPERFAMILY SSF57716 220 259 6.84E-12 T 14-10-2018 AMIS_69210 2dc2f46467a0e5173f504d51ebae2f36 264 SMART SM00898 2 113 4.7E-15 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AMIS_69210 2dc2f46467a0e5173f504d51ebae2f36 264 Pfam PF06827 Zinc finger found in FPG and IleRS 232 259 1.0E-10 T 14-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 AMIS_69210 2dc2f46467a0e5173f504d51ebae2f36 264 SUPERFAMILY SSF46946 126 191 8.75E-18 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 AMIS_69210 2dc2f46467a0e5173f504d51ebae2f36 264 Gene3D G3DSA:1.10.8.50 128 259 2.3E-33 T 14-10-2018 AMIS_69210 2dc2f46467a0e5173f504d51ebae2f36 264 SUPERFAMILY SSF81624 2 128 1.83E-21 T 14-10-2018 IPR035937 MutM-like, N-terminal AMIS_69210 2dc2f46467a0e5173f504d51ebae2f36 264 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 100 7.6E-9 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AMIS_69210 2dc2f46467a0e5173f504d51ebae2f36 264 ProSitePatterns PS01242 Zinc finger FPG-type signature. 234 258 - T 14-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 AMIS_69210 2dc2f46467a0e5173f504d51ebae2f36 264 Gene3D G3DSA:3.20.190.10 2 127 3.8E-26 T 14-10-2018 IPR035937 MutM-like, N-terminal AMIS_69210 2dc2f46467a0e5173f504d51ebae2f36 264 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 127 189 5.5E-9 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AMIS_69210 2dc2f46467a0e5173f504d51ebae2f36 264 SMART SM01232 127 215 5.0E-18 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AMIS_21920 a6a9d4a1c2433c5856b803d8de074683 318 SUPERFAMILY SSF51679 2 318 8.51E-56 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_21920 a6a9d4a1c2433c5856b803d8de074683 318 TIGRFAM TIGR03885 flavin_revert: probable non-F420 flavinoid oxidoreductase 5 317 1.9E-144 T 14-10-2018 IPR023907 Non-F420 flavinoid oxidoreductase AMIS_21920 a6a9d4a1c2433c5856b803d8de074683 318 Gene3D G3DSA:3.20.20.30 1 318 3.2E-59 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_21920 a6a9d4a1c2433c5856b803d8de074683 318 Pfam PF00296 Luciferase-like monooxygenase 8 291 1.1E-44 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMIS_21920 a6a9d4a1c2433c5856b803d8de074683 318 TIGRFAM TIGR03557 F420_G6P_family: F420-dependent oxidoreductase, G6PDH family 5 318 8.8E-81 T 14-10-2018 IPR019945 F420-dependent glucose-6-phosphate dehydrogenase-related AMIS_65080 a2535f4f08e3e12d66b6fbade324d432 395 Pfam PF13795 HupE / UreJ protein 202 364 9.7E-38 T 14-10-2018 IPR032809 Putative HupE/UreJ protein AMIS_39970 7d7744ecf642e69ab323669f95719183 183 SUPERFAMILY SSF46785 1 178 3.01E-35 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_39970 7d7744ecf642e69ab323669f95719183 183 Pfam PF03551 Transcriptional regulator PadR-like family 5 78 1.9E-13 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal AMIS_39970 7d7744ecf642e69ab323669f95719183 183 Pfam PF10400 Virulence activator alpha C-term 90 177 2.1E-18 T 14-10-2018 IPR018309 Transcription regulator PadR, C-terminal AMIS_39970 7d7744ecf642e69ab323669f95719183 183 Gene3D G3DSA:1.10.10.10 1 85 4.5E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_76610 fc6f21f13afccae83598afd96eab1104 241 Pfam PF07398 MDMPI C-terminal domain 138 236 2.5E-8 T 14-10-2018 IPR010872 MDMPI C-terminal AMIS_62130 cf25224d770ee6247ce24ac05823ab04 342 Gene3D G3DSA:3.20.20.70 3 331 2.5E-122 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_62130 cf25224d770ee6247ce24ac05823ab04 342 PIRSF PIRSF000164 20 341 9.6E-94 T 14-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 AMIS_62130 cf25224d770ee6247ce24ac05823ab04 342 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 289 309 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 AMIS_62130 cf25224d770ee6247ce24ac05823ab04 342 SUPERFAMILY SSF51395 9 332 1.21E-91 T 14-10-2018 AMIS_62130 cf25224d770ee6247ce24ac05823ab04 342 Pfam PF01180 Dihydroorotate dehydrogenase 52 331 4.8E-85 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 AMIS_62130 cf25224d770ee6247ce24ac05823ab04 342 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 4 333 46.591 T 14-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AMIS_62130 cf25224d770ee6247ce24ac05823ab04 342 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 19 332 8.1E-113 T 14-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AMIS_62130 cf25224d770ee6247ce24ac05823ab04 342 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 85 104 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 AMIS_150 72bbacf3e6e1aefb8b223d3e3ee92944 187 SUPERFAMILY SSF55826 34 180 1.24E-24 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 AMIS_150 72bbacf3e6e1aefb8b223d3e3ee92944 187 Gene3D G3DSA:3.90.960.10 38 181 2.9E-24 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 AMIS_150 72bbacf3e6e1aefb8b223d3e3ee92944 187 Pfam PF04073 Aminoacyl-tRNA editing domain 49 168 6.6E-17 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AMIS_22910 e14d38c0a4c4b3e22eece6dfd2abe677 345 Pfam PF00005 ABC transporter 22 164 1.7E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_22910 e14d38c0a4c4b3e22eece6dfd2abe677 345 Gene3D G3DSA:2.40.50.140 288 332 4.5E-7 T 14-10-2018 AMIS_22910 e14d38c0a4c4b3e22eece6dfd2abe677 345 Pfam PF08402 TOBE domain 276 340 3.3E-10 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 AMIS_22910 e14d38c0a4c4b3e22eece6dfd2abe677 345 SMART SM00382 31 214 4.0E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_22910 e14d38c0a4c4b3e22eece6dfd2abe677 345 SUPERFAMILY SSF52540 7 244 2.48E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_22910 e14d38c0a4c4b3e22eece6dfd2abe677 345 SUPERFAMILY SSF50331 241 341 1.19E-12 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal AMIS_22910 e14d38c0a4c4b3e22eece6dfd2abe677 345 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_22910 e14d38c0a4c4b3e22eece6dfd2abe677 345 Gene3D G3DSA:3.40.50.300 1 240 3.1E-75 T 14-10-2018 AMIS_22910 e14d38c0a4c4b3e22eece6dfd2abe677 345 Gene3D G3DSA:2.40.50.100 241 336 4.5E-7 T 14-10-2018 AMIS_910 f301b8d2bb071e310e5cd16f1d438229 862 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 23 68 1.5E-7 T 14-10-2018 IPR004176 Clp, N-terminal AMIS_910 f301b8d2bb071e310e5cd16f1d438229 862 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 95 146 3.3E-10 T 14-10-2018 IPR004176 Clp, N-terminal AMIS_910 f301b8d2bb071e310e5cd16f1d438229 862 Pfam PF07724 AAA domain (Cdc48 subfamily) 600 761 1.0E-50 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMIS_910 f301b8d2bb071e310e5cd16f1d438229 862 Gene3D G3DSA:1.10.1780.10 2 149 4.2E-31 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AMIS_910 f301b8d2bb071e310e5cd16f1d438229 862 SMART SM00382 601 749 1.0E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_910 f301b8d2bb071e310e5cd16f1d438229 862 SMART SM00382 200 346 3.6E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_910 f301b8d2bb071e310e5cd16f1d438229 862 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 205 318 8.7E-11 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMIS_910 f301b8d2bb071e310e5cd16f1d438229 862 Gene3D G3DSA:1.10.8.60 767 861 6.0E-27 T 14-10-2018 AMIS_910 f301b8d2bb071e310e5cd16f1d438229 862 Gene3D G3DSA:3.40.50.300 554 765 3.8E-84 T 14-10-2018 AMIS_910 f301b8d2bb071e310e5cd16f1d438229 862 Gene3D G3DSA:3.40.50.300 150 344 3.2E-72 T 14-10-2018 AMIS_910 f301b8d2bb071e310e5cd16f1d438229 862 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 605 623 3.0E-41 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 AMIS_910 f301b8d2bb071e310e5cd16f1d438229 862 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 650 668 3.0E-41 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 AMIS_910 f301b8d2bb071e310e5cd16f1d438229 862 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 679 697 3.0E-41 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 AMIS_910 f301b8d2bb071e310e5cd16f1d438229 862 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 712 726 3.0E-41 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 AMIS_910 f301b8d2bb071e310e5cd16f1d438229 862 SUPERFAMILY SSF81923 4 157 1.8E-30 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AMIS_910 f301b8d2bb071e310e5cd16f1d438229 862 SUPERFAMILY SSF52540 550 850 7.4E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_910 f301b8d2bb071e310e5cd16f1d438229 862 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 635 653 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 AMIS_910 f301b8d2bb071e310e5cd16f1d438229 862 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 296 308 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 AMIS_910 f301b8d2bb071e310e5cd16f1d438229 862 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 767 846 2.3E-25 T 14-10-2018 IPR019489 Clp ATPase, C-terminal AMIS_910 f301b8d2bb071e310e5cd16f1d438229 862 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 852 0.0 T 14-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 AMIS_910 f301b8d2bb071e310e5cd16f1d438229 862 SMART SM01086 767 858 3.9E-34 T 14-10-2018 IPR019489 Clp ATPase, C-terminal AMIS_910 f301b8d2bb071e310e5cd16f1d438229 862 Gene3D G3DSA:3.40.50.300 345 548 1.3E-67 T 14-10-2018 AMIS_910 f301b8d2bb071e310e5cd16f1d438229 862 SUPERFAMILY SSF52540 160 549 3.43E-93 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_65450 c982b9c1a8da04e335df3b96c691ad83 258 SMART SM00849 10 206 8.9E-5 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMIS_65450 c982b9c1a8da04e335df3b96c691ad83 258 Gene3D G3DSA:3.60.15.10 1 254 4.1E-53 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMIS_65450 c982b9c1a8da04e335df3b96c691ad83 258 Pfam PF12706 Beta-lactamase superfamily domain 23 207 4.6E-30 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMIS_65450 c982b9c1a8da04e335df3b96c691ad83 258 SUPERFAMILY SSF56281 6 214 3.14E-28 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMIS_17800 908a03c3a15d44d455a2a36836bda6ed 164 Pfam PF06897 Protein of unknown function (DUF1269) 61 159 9.0E-27 T 14-10-2018 IPR009200 Protein of unknown function DUF1269, membrane associated AMIS_69120 7140d47f48f0cb7b52d6a7ac08f36eab 218 Pfam PF03167 Uracil DNA glycosylase superfamily 45 212 3.5E-37 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMIS_69120 7140d47f48f0cb7b52d6a7ac08f36eab 218 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 31 203 1.8E-37 T 14-10-2018 IPR005273 Uracil-DNA glycosylase family 4 AMIS_69120 7140d47f48f0cb7b52d6a7ac08f36eab 218 TIGRFAM TIGR03914 UDG_fam_dom: uracil-DNA glycosylase family domain 15 214 1.5E-72 T 14-10-2018 IPR005273 Uracil-DNA glycosylase family 4 AMIS_69120 7140d47f48f0cb7b52d6a7ac08f36eab 218 SUPERFAMILY SSF52141 21 215 4.25E-49 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMIS_69120 7140d47f48f0cb7b52d6a7ac08f36eab 218 Gene3D G3DSA:3.40.470.10 11 218 1.9E-54 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMIS_69120 7140d47f48f0cb7b52d6a7ac08f36eab 218 SMART SM00986 45 213 1.5E-33 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMIS_69120 7140d47f48f0cb7b52d6a7ac08f36eab 218 SMART SM00987 45 213 1.5E-33 T 14-10-2018 AMIS_33720 76c1636c01349d65ad8a2f311b4f97f7 153 SUPERFAMILY SSF54909 74 149 1.34E-14 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel AMIS_33720 76c1636c01349d65ad8a2f311b4f97f7 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 38 57 3.7E-10 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMIS_33720 76c1636c01349d65ad8a2f311b4f97f7 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 27 38 3.7E-10 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMIS_33720 76c1636c01349d65ad8a2f311b4f97f7 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 11 27 3.7E-10 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMIS_33720 76c1636c01349d65ad8a2f311b4f97f7 153 Gene3D G3DSA:1.10.10.10 4 64 2.3E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_33720 76c1636c01349d65ad8a2f311b4f97f7 153 SMART SM00344 11 117 7.7E-35 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AMIS_33720 76c1636c01349d65ad8a2f311b4f97f7 153 SUPERFAMILY SSF46785 10 70 5.75E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_33720 76c1636c01349d65ad8a2f311b4f97f7 153 Pfam PF13412 Winged helix-turn-helix DNA-binding 11 58 7.2E-15 T 14-10-2018 AMIS_33720 76c1636c01349d65ad8a2f311b4f97f7 153 Gene3D G3DSA:3.30.70.920 65 151 7.8E-18 T 14-10-2018 AMIS_33720 76c1636c01349d65ad8a2f311b4f97f7 153 Pfam PF01037 Lrp/AsnC ligand binding domain 80 147 8.6E-13 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMIS_61460 e6c9fdc82a2aef262b02929fff99e715 418 Pfam PF13416 Bacterial extracellular solute-binding protein 60 360 2.0E-41 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein AMIS_61460 e6c9fdc82a2aef262b02929fff99e715 418 SUPERFAMILY SSF53850 38 412 1.43E-65 T 14-10-2018 AMIS_61460 e6c9fdc82a2aef262b02929fff99e715 418 Gene3D G3DSA:3.40.190.10 55 377 1.0E-95 T 14-10-2018 AMIS_61460 e6c9fdc82a2aef262b02929fff99e715 418 PRINTS PR00181 Maltose binding protein signature 319 340 1.5E-10 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 AMIS_61460 e6c9fdc82a2aef262b02929fff99e715 418 PRINTS PR00181 Maltose binding protein signature 141 160 1.5E-10 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 AMIS_61460 e6c9fdc82a2aef262b02929fff99e715 418 PRINTS PR00181 Maltose binding protein signature 162 181 1.5E-10 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 AMIS_61460 e6c9fdc82a2aef262b02929fff99e715 418 PRINTS PR00181 Maltose binding protein signature 81 99 1.5E-10 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 AMIS_61460 e6c9fdc82a2aef262b02929fff99e715 418 PRINTS PR00181 Maltose binding protein signature 377 396 1.5E-10 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 AMIS_61460 e6c9fdc82a2aef262b02929fff99e715 418 Gene3D G3DSA:3.40.190.10 150 408 1.0E-95 T 14-10-2018 AMIS_57490 b294bff4a505d884abb08c7544c3440a 302 Pfam PF00682 HMGL-like 1 268 1.0E-32 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 AMIS_57490 b294bff4a505d884abb08c7544c3440a 302 SUPERFAMILY SSF51569 1 283 2.56E-55 T 14-10-2018 AMIS_57490 b294bff4a505d884abb08c7544c3440a 302 Gene3D G3DSA:3.20.20.70 1 285 3.9E-101 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_46350 9637220ce71f922017c525d5ffde6ec6 420 SUPERFAMILY SSF52266 122 333 1.38E-31 T 14-10-2018 AMIS_46350 9637220ce71f922017c525d5ffde6ec6 420 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 126 314 7.5E-18 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain AMIS_46350 9637220ce71f922017c525d5ffde6ec6 420 Gene3D G3DSA:3.40.50.1110 120 334 5.2E-34 T 14-10-2018 IPR036514 SGNH hydrolase superfamily AMIS_40030 9f120f4c5bd7fd55eb4525bd437054a5 937 SUPERFAMILY SSF46548 533 623 9.42E-8 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AMIS_40030 9f120f4c5bd7fd55eb4525bd437054a5 937 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 605 616 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMIS_40030 9f120f4c5bd7fd55eb4525bd437054a5 937 Gene3D G3DSA:3.30.465.40 24 208 9.0E-46 T 14-10-2018 AMIS_40030 9f120f4c5bd7fd55eb4525bd437054a5 937 Pfam PF01565 FAD binding domain 46 183 1.5E-39 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AMIS_40030 9f120f4c5bd7fd55eb4525bd437054a5 937 Gene3D G3DSA:1.10.45.10 467 507 4.8E-7 T 14-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AMIS_40030 9f120f4c5bd7fd55eb4525bd437054a5 937 Pfam PF13183 4Fe-4S dicluster domain 542 619 7.6E-9 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMIS_40030 9f120f4c5bd7fd55eb4525bd437054a5 937 Pfam PF02754 Cysteine-rich domain 719 794 1.6E-5 T 14-10-2018 IPR004017 Cysteine-rich domain AMIS_40030 9f120f4c5bd7fd55eb4525bd437054a5 937 SUPERFAMILY SSF55103 266 510 3.76E-53 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AMIS_40030 9f120f4c5bd7fd55eb4525bd437054a5 937 Gene3D G3DSA:3.30.70.2740 388 466 5.4E-7 T 14-10-2018 AMIS_40030 9f120f4c5bd7fd55eb4525bd437054a5 937 Pfam PF02913 FAD linked oxidases, C-terminal domain 265 504 6.3E-50 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 AMIS_40030 9f120f4c5bd7fd55eb4525bd437054a5 937 SUPERFAMILY SSF56176 25 260 3.23E-54 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AMIS_9650 174afc4ff3244462c9ad7bb8612050fa 246 SUPERFAMILY SSF52833 62 229 9.18E-28 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMIS_9650 174afc4ff3244462c9ad7bb8612050fa 246 Pfam PF13462 Thioredoxin 78 230 6.5E-24 T 14-10-2018 IPR012336 Thioredoxin-like fold AMIS_9650 174afc4ff3244462c9ad7bb8612050fa 246 Gene3D G3DSA:3.40.30.10 49 246 5.7E-51 T 14-10-2018 AMIS_33550 4973ce54e2a7336d06ab1c71acd8b8e3 203 Gene3D G3DSA:3.40.50.850 1 203 7.4E-53 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AMIS_33550 4973ce54e2a7336d06ab1c71acd8b8e3 203 Pfam PF00857 Isochorismatase family 7 178 8.4E-33 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 AMIS_33550 4973ce54e2a7336d06ab1c71acd8b8e3 203 SUPERFAMILY SSF52499 4 184 1.57E-44 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AMIS_52160 162262f70aeda1eef247f67a549a70c5 140 Gene3D G3DSA:3.30.750.24 22 136 9.1E-32 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_52160 162262f70aeda1eef247f67a549a70c5 140 SUPERFAMILY SSF52091 32 134 2.35E-24 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_52160 162262f70aeda1eef247f67a549a70c5 140 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 26 128 1.0E-18 T 14-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 AMIS_52160 162262f70aeda1eef247f67a549a70c5 140 Pfam PF13466 STAS domain 40 119 7.2E-18 T 14-10-2018 IPR002645 STAS domain AMIS_2770 47b004df69fc48870c30188b3d9b0098 78 Gene3D G3DSA:1.10.260.40 12 78 1.2E-6 T 14-10-2018 AMIS_2770 47b004df69fc48870c30188b3d9b0098 78 SUPERFAMILY SSF47413 14 75 2.03E-7 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_73300 f6a8709883f31a2cdd91350bef513abe 374 SUPERFAMILY SSF69572 135 278 1.92E-7 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 AMIS_73300 f6a8709883f31a2cdd91350bef513abe 374 Gene3D G3DSA:3.40.50.720 178 352 3.9E-16 T 14-10-2018 AMIS_73790 6d741b1fab5108146e4eadce6eca2c1a 239 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_73790 6d741b1fab5108146e4eadce6eca2c1a 239 Pfam PF00005 ABC transporter 21 166 2.4E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_73790 6d741b1fab5108146e4eadce6eca2c1a 239 Gene3D G3DSA:3.40.50.300 1 239 3.9E-64 T 14-10-2018 AMIS_73790 6d741b1fab5108146e4eadce6eca2c1a 239 SUPERFAMILY SSF52540 5 237 1.49E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_73790 6d741b1fab5108146e4eadce6eca2c1a 239 SMART SM00382 30 216 2.5E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_72240 509190b2ba79b4cc82d049e74ce92fc5 461 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 43 459 8.7E-140 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMIS_72240 509190b2ba79b4cc82d049e74ce92fc5 461 PRINTS PR01181 Diaminopimelate decarboxylase signature 344 362 1.3E-25 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMIS_72240 509190b2ba79b4cc82d049e74ce92fc5 461 PRINTS PR01181 Diaminopimelate decarboxylase signature 198 207 1.3E-25 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMIS_72240 509190b2ba79b4cc82d049e74ce92fc5 461 PRINTS PR01181 Diaminopimelate decarboxylase signature 109 126 1.3E-25 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMIS_72240 509190b2ba79b4cc82d049e74ce92fc5 461 PRINTS PR01181 Diaminopimelate decarboxylase signature 427 449 1.3E-25 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMIS_72240 509190b2ba79b4cc82d049e74ce92fc5 461 SUPERFAMILY SSF50621 300 460 3.98E-50 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AMIS_72240 509190b2ba79b4cc82d049e74ce92fc5 461 SUPERFAMILY SSF51419 62 327 3.76E-74 T 14-10-2018 IPR029066 PLP-binding barrel AMIS_72240 509190b2ba79b4cc82d049e74ce92fc5 461 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 51 460 38.476 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMIS_72240 509190b2ba79b4cc82d049e74ce92fc5 461 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 263 278 - T 14-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site AMIS_72240 509190b2ba79b4cc82d049e74ce92fc5 461 Gene3D G3DSA:2.40.37.10 49 456 1.8E-163 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AMIS_72240 509190b2ba79b4cc82d049e74ce92fc5 461 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 327 417 1.2E-14 T 14-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 AMIS_72240 509190b2ba79b4cc82d049e74ce92fc5 461 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 91 109 - T 14-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site AMIS_72240 509190b2ba79b4cc82d049e74ce92fc5 461 Gene3D G3DSA:3.20.20.10 70 325 1.8E-163 T 14-10-2018 IPR029066 PLP-binding barrel AMIS_72240 509190b2ba79b4cc82d049e74ce92fc5 461 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 111 123 1.8E-14 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AMIS_72240 509190b2ba79b4cc82d049e74ce92fc5 461 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 226 239 1.8E-14 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AMIS_72240 509190b2ba79b4cc82d049e74ce92fc5 461 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 315 334 1.8E-14 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AMIS_72240 509190b2ba79b4cc82d049e74ce92fc5 461 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 417 430 1.8E-14 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AMIS_72240 509190b2ba79b4cc82d049e74ce92fc5 461 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 91 109 1.8E-14 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AMIS_72240 509190b2ba79b4cc82d049e74ce92fc5 461 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 71 325 1.0E-59 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 AMIS_1770 90b908de856c11236f025ba912d7dbae 366 Gene3D G3DSA:3.30.465.40 9 205 2.0E-27 T 14-10-2018 AMIS_1770 90b908de856c11236f025ba912d7dbae 366 Pfam PF01565 FAD binding domain 24 154 2.3E-20 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AMIS_1770 90b908de856c11236f025ba912d7dbae 366 SUPERFAMILY SSF56176 14 183 1.87E-22 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AMIS_38120 d89a1e0807de8f42746922ff9cb2a6c3 307 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 283 4.8E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_38120 d89a1e0807de8f42746922ff9cb2a6c3 307 SUPERFAMILY SSF161098 69 277 4.47E-38 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_38120 d89a1e0807de8f42746922ff9cb2a6c3 307 Gene3D G3DSA:1.10.3720.10 56 291 1.1E-48 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_38120 d89a1e0807de8f42746922ff9cb2a6c3 307 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 68 127 3.1E-14 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 AMIS_64150 21e074b21de3848f3b327d9a19ee3f6f 340 TIGRFAM TIGR03554 F420_G6P_DH: glucose-6-phosphate dehydrogenase (coenzyme-F420) 2 329 1.4E-140 T 14-10-2018 IPR019944 F420-dependent glucose-6-phosphate dehydrogenase AMIS_64150 21e074b21de3848f3b327d9a19ee3f6f 340 Pfam PF00296 Luciferase-like monooxygenase 4 303 1.9E-65 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMIS_64150 21e074b21de3848f3b327d9a19ee3f6f 340 Gene3D G3DSA:3.20.20.30 1 330 8.1E-98 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_64150 21e074b21de3848f3b327d9a19ee3f6f 340 SUPERFAMILY SSF51679 1 329 1.31E-74 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_64150 21e074b21de3848f3b327d9a19ee3f6f 340 TIGRFAM TIGR03557 F420_G6P_family: F420-dependent oxidoreductase, G6PDH family 4 329 2.1E-78 T 14-10-2018 IPR019945 F420-dependent glucose-6-phosphate dehydrogenase-related AMIS_79890 74025acfc5919d1d055e17eb22a18276 306 Gene3D G3DSA:3.40.50.720 2 302 3.6E-38 T 14-10-2018 AMIS_79890 74025acfc5919d1d055e17eb22a18276 306 Pfam PF00106 short chain dehydrogenase 4 141 3.4E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_79890 74025acfc5919d1d055e17eb22a18276 306 SUPERFAMILY SSF51735 3 271 6.45E-28 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_64870 40f49bc774eb673eb1ec56e89d7a2646 655 Pfam PF08532 Beta-galactosidase trimerisation domain 395 591 1.5E-61 T 14-10-2018 IPR013738 Beta-galactosidase trimerisation GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AMIS_64870 40f49bc774eb673eb1ec56e89d7a2646 655 Pfam PF08533 Beta-galactosidase C-terminal domain 601 636 1.5E-5 T 14-10-2018 IPR013739 Beta-galactosidase C-terminal GO:0004565|GO:0006012 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AMIS_64870 40f49bc774eb673eb1ec56e89d7a2646 655 SUPERFAMILY SSF52317 392 591 1.98E-58 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_64870 40f49bc774eb673eb1ec56e89d7a2646 655 Gene3D G3DSA:2.60.40.1180 600 651 3.9E-9 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta AMIS_64870 40f49bc774eb673eb1ec56e89d7a2646 655 Pfam PF02449 Beta-galactosidase 13 383 3.5E-142 T 14-10-2018 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AMIS_64870 40f49bc774eb673eb1ec56e89d7a2646 655 Gene3D G3DSA:3.40.50.880 391 595 5.9E-65 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_64870 40f49bc774eb673eb1ec56e89d7a2646 655 PIRSF PIRSF001084 1 653 1.3E-244 T 14-10-2018 IPR003476 Glycoside hydrolase, family 42 GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AMIS_64870 40f49bc774eb673eb1ec56e89d7a2646 655 SUPERFAMILY SSF51445 8 365 1.63E-110 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_64870 40f49bc774eb673eb1ec56e89d7a2646 655 Gene3D G3DSA:3.20.20.80 1 389 1.9E-134 T 14-10-2018 AMIS_52260 b3ab88d79b492dcce5826c62c06fb235 134 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 10 91 1.3E-10 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AMIS_52260 b3ab88d79b492dcce5826c62c06fb235 134 TIGRFAM TIGR03618 Rv1155_F420: PPOX class probable F420-dependent enzyme 13 127 2.4E-25 T 14-10-2018 IPR019920 F420-binding domain, putative AMIS_52260 b3ab88d79b492dcce5826c62c06fb235 134 Gene3D G3DSA:2.30.110.10 8 133 8.4E-41 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AMIS_52260 b3ab88d79b492dcce5826c62c06fb235 134 SUPERFAMILY SSF50475 12 127 3.93E-29 T 14-10-2018 AMIS_15200 7cd3fabe9b1c8323ba30e3c9192be2e9 458 SUPERFAMILY SSF63418 1 97 7.32E-21 T 14-10-2018 IPR035911 MurE/MurF, N-terminal AMIS_15200 7cd3fabe9b1c8323ba30e3c9192be2e9 458 Gene3D G3DSA:3.40.1390.10 1 81 3.7E-20 T 14-10-2018 AMIS_15200 7cd3fabe9b1c8323ba30e3c9192be2e9 458 Gene3D G3DSA:3.90.190.20 313 452 5.3E-34 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AMIS_15200 7cd3fabe9b1c8323ba30e3c9192be2e9 458 SUPERFAMILY SSF53244 316 441 3.27E-31 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AMIS_15200 7cd3fabe9b1c8323ba30e3c9192be2e9 458 SUPERFAMILY SSF53623 102 309 9.03E-51 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AMIS_15200 7cd3fabe9b1c8323ba30e3c9192be2e9 458 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 33 440 2.1E-119 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMIS_15200 7cd3fabe9b1c8323ba30e3c9192be2e9 458 Gene3D G3DSA:3.40.1190.10 82 310 3.7E-68 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AMIS_15200 7cd3fabe9b1c8323ba30e3c9192be2e9 458 Pfam PF02875 Mur ligase family, glutamate ligase domain 316 398 3.0E-19 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 AMIS_15200 7cd3fabe9b1c8323ba30e3c9192be2e9 458 Pfam PF01225 Mur ligase family, catalytic domain 29 74 1.4E-6 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AMIS_15200 7cd3fabe9b1c8323ba30e3c9192be2e9 458 Pfam PF08245 Mur ligase middle domain 108 293 8.4E-42 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AMIS_15200 7cd3fabe9b1c8323ba30e3c9192be2e9 458 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 451 30.865 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMIS_21660 f0ba2cce128bf50de75fa3a34023af52 373 PIRSF PIRSF000429 1 373 1.8E-113 T 14-10-2018 IPR002155 Thiolase GO:0016747 AMIS_21660 f0ba2cce128bf50de75fa3a34023af52 373 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 371 9.1E-119 T 14-10-2018 IPR002155 Thiolase GO:0016747 AMIS_21660 f0ba2cce128bf50de75fa3a34023af52 373 ProSitePatterns PS00737 Thiolases signature 2. 319 335 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 AMIS_21660 f0ba2cce128bf50de75fa3a34023af52 373 Pfam PF02803 Thiolase, C-terminal domain 251 372 1.2E-42 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 AMIS_21660 f0ba2cce128bf50de75fa3a34023af52 373 Gene3D G3DSA:3.40.47.10 126 370 9.6E-130 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_21660 f0ba2cce128bf50de75fa3a34023af52 373 SUPERFAMILY SSF53901 251 372 4.48E-41 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_21660 f0ba2cce128bf50de75fa3a34023af52 373 Pfam PF00108 Thiolase, N-terminal domain 5 242 5.5E-53 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 AMIS_21660 f0ba2cce128bf50de75fa3a34023af52 373 SUPERFAMILY SSF53901 2 250 3.26E-62 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_21660 f0ba2cce128bf50de75fa3a34023af52 373 Gene3D G3DSA:3.40.47.10 6 256 9.6E-130 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_52510 12264ea4c6403521088ea548896d37c8 234 SUPERFAMILY SSF46894 160 233 2.14E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_52510 12264ea4c6403521088ea548896d37c8 234 Gene3D G3DSA:3.40.50.12740 24 233 5.0E-65 T 14-10-2018 AMIS_52510 12264ea4c6403521088ea548896d37c8 234 SUPERFAMILY SSF52172 23 154 3.13E-31 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_52510 12264ea4c6403521088ea548896d37c8 234 SMART SM00421 170 227 7.8E-24 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_52510 12264ea4c6403521088ea548896d37c8 234 ProSitePatterns PS00622 LuxR-type HTH domain signature. 187 214 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_52510 12264ea4c6403521088ea548896d37c8 234 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 187 3.3E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_52510 12264ea4c6403521088ea548896d37c8 234 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 203 215 3.3E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_52510 12264ea4c6403521088ea548896d37c8 234 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 187 203 3.3E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_52510 12264ea4c6403521088ea548896d37c8 234 Pfam PF00196 Bacterial regulatory proteins, luxR family 173 227 2.7E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_52510 12264ea4c6403521088ea548896d37c8 234 Pfam PF00072 Response regulator receiver domain 26 140 4.2E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_52510 12264ea4c6403521088ea548896d37c8 234 SMART SM00448 24 139 7.0E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_31370 6a85443f19ee78edfa8470bd9c79d42b 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 1.5E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_31370 6a85443f19ee78edfa8470bd9c79d42b 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 1.5E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_31370 6a85443f19ee78edfa8470bd9c79d42b 198 Gene3D G3DSA:1.10.357.10 60 195 5.3E-25 T 14-10-2018 AMIS_31370 6a85443f19ee78edfa8470bd9c79d42b 198 Gene3D G3DSA:1.10.10.60 5 59 2.8E-16 T 14-10-2018 AMIS_31370 6a85443f19ee78edfa8470bd9c79d42b 198 SUPERFAMILY SSF46689 8 86 3.21E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_31370 6a85443f19ee78edfa8470bd9c79d42b 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 63 7.6E-15 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_14950 fd7371faebab0dcf2c1bf6291af7a19d 156 Pfam PF04073 Aminoacyl-tRNA editing domain 28 146 5.9E-29 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AMIS_14950 fd7371faebab0dcf2c1bf6291af7a19d 156 SUPERFAMILY SSF55826 8 155 1.24E-36 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 AMIS_14950 fd7371faebab0dcf2c1bf6291af7a19d 156 Gene3D G3DSA:3.90.960.10 3 156 4.9E-43 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 AMIS_35390 e516e45d0e785c39423ec162932878a2 532 PRINTS PR00344 Bacterial sensor protein C-terminal signature 476 494 2.9E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_35390 e516e45d0e785c39423ec162932878a2 532 PRINTS PR00344 Bacterial sensor protein C-terminal signature 442 456 2.9E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_35390 e516e45d0e785c39423ec162932878a2 532 PRINTS PR00344 Bacterial sensor protein C-terminal signature 460 470 2.9E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_35390 e516e45d0e785c39423ec162932878a2 532 PRINTS PR00344 Bacterial sensor protein C-terminal signature 500 513 2.9E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_35390 e516e45d0e785c39423ec162932878a2 532 Pfam PF00512 His Kinase A (phospho-acceptor) domain 295 360 7.6E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_35390 e516e45d0e785c39423ec162932878a2 532 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 406 514 3.6E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_35390 e516e45d0e785c39423ec162932878a2 532 Pfam PF17158 Membrane-associated sensor, integral membrane domain 40 264 1.7E-14 T 14-10-2018 IPR033424 Membrane-associated sensor domain AMIS_35390 e516e45d0e785c39423ec162932878a2 532 SMART SM00387 405 516 1.0E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_35390 e516e45d0e785c39423ec162932878a2 532 Gene3D G3DSA:3.30.565.10 369 520 2.4E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_35390 e516e45d0e785c39423ec162932878a2 532 SUPERFAMILY SSF47384 279 363 2.55E-12 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_35390 e516e45d0e785c39423ec162932878a2 532 SUPERFAMILY SSF55874 353 516 1.57E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_35390 e516e45d0e785c39423ec162932878a2 532 SMART SM00388 294 362 7.3E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_35390 e516e45d0e785c39423ec162932878a2 532 Gene3D G3DSA:1.10.287.130 258 360 8.7E-11 T 14-10-2018 AMIS_50870 147760a49d26ec95b9e5f5c3959211da 250 Pfam PF01066 CDP-alcohol phosphatidyltransferase 66 134 1.5E-9 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AMIS_50870 147760a49d26ec95b9e5f5c3959211da 250 Gene3D G3DSA:1.20.120.1760 54 229 1.3E-7 T 14-10-2018 AMIS_50870 147760a49d26ec95b9e5f5c3959211da 250 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 112 134 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AMIS_23610 fba0fd500228e8cef29c3127c7fd9933 336 Pfam PF00892 EamA-like transporter family 2 138 5.9E-18 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMIS_23610 fba0fd500228e8cef29c3127c7fd9933 336 Pfam PF00892 EamA-like transporter family 149 282 2.3E-21 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMIS_23610 fba0fd500228e8cef29c3127c7fd9933 336 SUPERFAMILY SSF103481 37 140 7.06E-13 T 14-10-2018 AMIS_23610 fba0fd500228e8cef29c3127c7fd9933 336 SUPERFAMILY SSF103481 210 286 4.58E-14 T 14-10-2018 AMIS_35030 97fe6e40259259a114781fffc83f7f1e 209 Pfam PF01144 Coenzyme A transferase 6 199 7.9E-36 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 AMIS_35030 97fe6e40259259a114781fffc83f7f1e 209 SUPERFAMILY SSF100950 2 208 5.12E-71 T 14-10-2018 IPR037171 NagB/RpiA transferase-like AMIS_35030 97fe6e40259259a114781fffc83f7f1e 209 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 2 207 9.1E-96 T 14-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 AMIS_35030 97fe6e40259259a114781fffc83f7f1e 209 Gene3D G3DSA:3.40.1080.10 2 209 1.4E-96 T 14-10-2018 AMIS_35030 97fe6e40259259a114781fffc83f7f1e 209 SMART SM00882 5 201 3.7E-75 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 AMIS_35030 97fe6e40259259a114781fffc83f7f1e 209 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 43 51 - T 14-10-2018 IPR004164 Coenzyme A transferase active site GO:0008410 Reactome: R-HSA-77108 AMIS_4900 8c95c81c5de93511df4ac5f95d6197e3 133 SUPERFAMILY SSF50331 10 126 9.92E-17 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal AMIS_4900 8c95c81c5de93511df4ac5f95d6197e3 133 Pfam PF03459 TOBE domain 64 124 2.4E-10 T 14-10-2018 IPR005116 Transport-associated OB, type 1 AMIS_4900 8c95c81c5de93511df4ac5f95d6197e3 133 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 6 39 3.6E-10 T 14-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 AMIS_4900 8c95c81c5de93511df4ac5f95d6197e3 133 Pfam PF12728 Helix-turn-helix domain 6 53 2.0E-10 T 14-10-2018 AMIS_4900 8c95c81c5de93511df4ac5f95d6197e3 133 Gene3D G3DSA:2.40.50.100 63 126 7.6E-16 T 14-10-2018 AMIS_4900 8c95c81c5de93511df4ac5f95d6197e3 133 Gene3D G3DSA:1.10.1660.10 3 53 3.0E-12 T 14-10-2018 AMIS_61580 be51571b9fd7be41b073b231330a74e4 333 Gene3D G3DSA:3.40.50.720 5 319 9.6E-109 T 14-10-2018 AMIS_61580 be51571b9fd7be41b073b231330a74e4 333 SUPERFAMILY SSF55347 145 301 4.06E-42 T 14-10-2018 AMIS_61580 be51571b9fd7be41b073b231330a74e4 333 SUPERFAMILY SSF51735 1 163 1.6E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_61580 be51571b9fd7be41b073b231330a74e4 333 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 154 302 2.3E-16 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AMIS_61580 be51571b9fd7be41b073b231330a74e4 333 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 128 1.5E-28 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AMIS_61580 be51571b9fd7be41b073b231330a74e4 333 Gene3D G3DSA:3.30.360.10 149 306 9.6E-109 T 14-10-2018 AMIS_61580 be51571b9fd7be41b073b231330a74e4 333 SMART SM00859 4 135 5.6E-44 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AMIS_61580 be51571b9fd7be41b073b231330a74e4 333 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 3 327 38.138 T 14-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AMIS_61580 be51571b9fd7be41b073b231330a74e4 333 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 333 1.8E-108 T 14-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AMIS_46730 e26b1de9a2f1d793481973ee409b7f16 123 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 2 118 2.5E-42 T 14-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 AMIS_46730 e26b1de9a2f1d793481973ee409b7f16 123 Pfam PF01597 Glycine cleavage H-protein 6 109 1.1E-39 T 14-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate AMIS_46730 e26b1de9a2f1d793481973ee409b7f16 123 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 3 120 35.983 T 14-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 AMIS_46730 e26b1de9a2f1d793481973ee409b7f16 123 Gene3D G3DSA:2.40.50.100 1 119 4.3E-44 T 14-10-2018 AMIS_46730 e26b1de9a2f1d793481973ee409b7f16 123 SUPERFAMILY SSF51230 2 119 6.67E-37 T 14-10-2018 IPR011053 Single hybrid motif AMIS_51660 7ddf49f4cd4b13e61fc9dc852eaf2f79 372 TIGRFAM TIGR03451 mycoS_dep_FDH: S-(hydroxymethyl)mycothiol dehydrogenase 4 372 5.0E-192 T 14-10-2018 IPR017816 S-(hydroxymethyl)mycothiol dehydrogenase MetaCyc: PWY-7908 AMIS_51660 7ddf49f4cd4b13e61fc9dc852eaf2f79 372 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 147 3.0E-27 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMIS_51660 7ddf49f4cd4b13e61fc9dc852eaf2f79 372 SUPERFAMILY SSF51735 154 331 1.69E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_51660 7ddf49f4cd4b13e61fc9dc852eaf2f79 372 Pfam PF00107 Zinc-binding dehydrogenase 189 321 4.7E-26 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMIS_51660 7ddf49f4cd4b13e61fc9dc852eaf2f79 372 SUPERFAMILY SSF50129 2 185 1.49E-54 T 14-10-2018 IPR011032 GroES-like superfamily AMIS_51660 7ddf49f4cd4b13e61fc9dc852eaf2f79 372 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AMIS_51660 7ddf49f4cd4b13e61fc9dc852eaf2f79 372 Gene3D G3DSA:3.90.180.10 9 355 1.5E-109 T 14-10-2018 AMIS_51660 7ddf49f4cd4b13e61fc9dc852eaf2f79 372 Gene3D G3DSA:3.40.50.720 166 309 1.5E-109 T 14-10-2018 AMIS_41300 21d846bcdbca533c6062f51a4f3f3ed2 203 SUPERFAMILY SSF52172 1 129 2.28E-30 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_41300 21d846bcdbca533c6062f51a4f3f3ed2 203 SMART SM00421 138 195 6.9E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_41300 21d846bcdbca533c6062f51a4f3f3ed2 203 SUPERFAMILY SSF46894 130 201 3.03E-18 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_41300 21d846bcdbca533c6062f51a4f3f3ed2 203 Pfam PF00072 Response regulator receiver domain 5 115 3.2E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_41300 21d846bcdbca533c6062f51a4f3f3ed2 203 Gene3D G3DSA:3.40.50.12740 2 201 6.7E-57 T 14-10-2018 AMIS_41300 21d846bcdbca533c6062f51a4f3f3ed2 203 SMART SM00448 2 115 1.2E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_41300 21d846bcdbca533c6062f51a4f3f3ed2 203 Pfam PF00196 Bacterial regulatory proteins, luxR family 140 195 5.6E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_41300 21d846bcdbca533c6062f51a4f3f3ed2 203 ProSitePatterns PS00622 LuxR-type HTH domain signature. 155 182 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_41300 21d846bcdbca533c6062f51a4f3f3ed2 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 183 1.4E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_41300 21d846bcdbca533c6062f51a4f3f3ed2 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 171 1.4E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_41300 21d846bcdbca533c6062f51a4f3f3ed2 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 141 155 1.4E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_49370 2f34c4d661aff5391757ad02c5939771 873 Pfam PF08487 Vault protein inter-alpha-trypsin domain 39 145 4.6E-32 T 14-10-2018 IPR013694 VIT domain AMIS_49370 2f34c4d661aff5391757ad02c5939771 873 Gene3D G3DSA:3.40.50.410 296 471 2.7E-32 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMIS_49370 2f34c4d661aff5391757ad02c5939771 873 SUPERFAMILY SSF53300 295 471 8.74E-26 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMIS_49370 2f34c4d661aff5391757ad02c5939771 873 Pfam PF13768 von Willebrand factor type A domain 296 452 7.6E-15 T 14-10-2018 IPR002035 von Willebrand factor, type A AMIS_49370 2f34c4d661aff5391757ad02c5939771 873 SMART SM00327 295 469 2.6E-17 T 14-10-2018 IPR002035 von Willebrand factor, type A AMIS_49370 2f34c4d661aff5391757ad02c5939771 873 SMART SM00609 20 148 1.7E-8 T 14-10-2018 IPR013694 VIT domain AMIS_61470 a72ded8c267a2353c443a33ff34acc08 269 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 14-10-2018 AMIS_61470 a72ded8c267a2353c443a33ff34acc08 269 SUPERFAMILY SSF47413 2 48 2.43E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_61470 a72ded8c267a2353c443a33ff34acc08 269 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 47 4.1E-14 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_61470 a72ded8c267a2353c443a33ff34acc08 269 Gene3D G3DSA:3.40.50.2300 163 261 1.2E-48 T 14-10-2018 AMIS_61470 a72ded8c267a2353c443a33ff34acc08 269 SUPERFAMILY SSF53822 59 265 2.57E-44 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_61470 a72ded8c267a2353c443a33ff34acc08 269 Gene3D G3DSA:3.40.50.2300 59 162 1.2E-48 T 14-10-2018 AMIS_61470 a72ded8c267a2353c443a33ff34acc08 269 Gene3D G3DSA:1.10.260.40 1 57 2.7E-16 T 14-10-2018 AMIS_61470 a72ded8c267a2353c443a33ff34acc08 269 SMART SM00354 2 69 1.3E-22 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_61470 a72ded8c267a2353c443a33ff34acc08 269 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 60 260 9.3E-16 T 14-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain AMIS_46200 702c6084313be8508eb75c741dda6ca7 180 SUPERFAMILY SSF55729 2 151 1.04E-32 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_46200 702c6084313be8508eb75c741dda6ca7 180 Gene3D G3DSA:3.40.630.30 1 155 1.5E-35 T 14-10-2018 AMIS_46200 702c6084313be8508eb75c741dda6ca7 180 Pfam PF13302 Acetyltransferase (GNAT) domain 8 145 2.8E-26 T 14-10-2018 IPR000182 GNAT domain AMIS_7330 daee43f7102a8c22e2d18760b5d808ae 237 SUPERFAMILY SSF53335 6 198 8.06E-16 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_7330 daee43f7102a8c22e2d18760b5d808ae 237 Pfam PF13489 Methyltransferase domain 47 191 1.6E-6 T 14-10-2018 AMIS_7330 daee43f7102a8c22e2d18760b5d808ae 237 Gene3D G3DSA:3.40.50.150 6 200 2.1E-15 T 14-10-2018 AMIS_5620 9407f78c64e3be0554308445bf050e3f 209 SUPERFAMILY SSF143243 40 169 1.57E-38 T 14-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_5620 9407f78c64e3be0554308445bf050e3f 209 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 95 150 1.0E-8 T 14-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_5620 9407f78c64e3be0554308445bf050e3f 209 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 122 143 - T 14-10-2018 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_5620 9407f78c64e3be0554308445bf050e3f 209 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 44 161 6.7E-36 T 14-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_5620 9407f78c64e3be0554308445bf050e3f 209 Gene3D G3DSA:3.30.460.80 8 140 5.3E-26 T 14-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_31380 22b84dcd84613661d861fe4942e3e508 1209 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 700 714 - T 14-10-2018 IPR019775 WD40 repeat, conserved site AMIS_31380 22b84dcd84613661d861fe4942e3e508 1209 SUPERFAMILY SSF52540 110 324 1.13E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_31380 22b84dcd84613661d861fe4942e3e508 1209 SMART SM00320 1136 1174 7.7E-7 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_31380 22b84dcd84613661d861fe4942e3e508 1209 SMART SM00320 586 625 5.4E-5 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_31380 22b84dcd84613661d861fe4942e3e508 1209 SMART SM00320 1093 1133 5.6E-8 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_31380 22b84dcd84613661d861fe4942e3e508 1209 SMART SM00320 882 921 5.9E-6 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_31380 22b84dcd84613661d861fe4942e3e508 1209 SMART SM00320 1052 1090 4.1E-5 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_31380 22b84dcd84613661d861fe4942e3e508 1209 SMART SM00320 755 794 4.1E-10 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_31380 22b84dcd84613661d861fe4942e3e508 1209 SMART SM00320 923 963 1.3E-4 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_31380 22b84dcd84613661d861fe4942e3e508 1209 SMART SM00320 715 752 0.0038 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_31380 22b84dcd84613661d861fe4942e3e508 1209 SMART SM00320 840 879 1.6E-10 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_31380 22b84dcd84613661d861fe4942e3e508 1209 SMART SM00320 797 837 0.061 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_31380 22b84dcd84613661d861fe4942e3e508 1209 SMART SM00320 966 1005 1.9E-9 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_31380 22b84dcd84613661d861fe4942e3e508 1209 SMART SM00320 676 713 8.1E-5 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_31380 22b84dcd84613661d861fe4942e3e508 1209 SMART SM00320 632 671 14.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_31380 22b84dcd84613661d861fe4942e3e508 1209 SMART SM00320 1007 1046 7.5E-7 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_31380 22b84dcd84613661d861fe4942e3e508 1209 Gene3D G3DSA:2.130.10.10 1009 1097 1.3E-20 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_31380 22b84dcd84613661d861fe4942e3e508 1209 Gene3D G3DSA:2.130.10.10 1098 1183 1.1E-23 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_31380 22b84dcd84613661d861fe4942e3e508 1209 Gene3D G3DSA:2.130.10.10 746 924 2.1E-52 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_31380 22b84dcd84613661d861fe4942e3e508 1209 SUPERFAMILY SSF50960 1051 1179 5.23E-32 T 14-10-2018 AMIS_31380 22b84dcd84613661d861fe4942e3e508 1209 SUPERFAMILY SSF50978 758 1089 1.79E-78 T 14-10-2018 IPR036322 WD40-repeat-containing domain superfamily GO:0005515 AMIS_31380 22b84dcd84613661d861fe4942e3e508 1209 Gene3D G3DSA:2.130.10.10 925 1008 9.7E-28 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_31380 22b84dcd84613661d861fe4942e3e508 1209 SUPERFAMILY SSF50998 586 841 7.22E-51 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AMIS_31380 22b84dcd84613661d861fe4942e3e508 1209 Pfam PF00400 WD domain, G-beta repeat 803 837 0.0036 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_31380 22b84dcd84613661d861fe4942e3e508 1209 Pfam PF00400 WD domain, G-beta repeat 683 713 5.3E-6 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_31380 22b84dcd84613661d861fe4942e3e508 1209 Pfam PF00400 WD domain, G-beta repeat 846 879 6.5E-8 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_31380 22b84dcd84613661d861fe4942e3e508 1209 Pfam PF00400 WD domain, G-beta repeat 594 624 1.2E-5 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_31380 22b84dcd84613661d861fe4942e3e508 1209 Pfam PF00400 WD domain, G-beta repeat 973 1005 2.6E-6 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_31380 22b84dcd84613661d861fe4942e3e508 1209 Pfam PF00400 WD domain, G-beta repeat 888 920 4.3E-5 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_31380 22b84dcd84613661d861fe4942e3e508 1209 Pfam PF00400 WD domain, G-beta repeat 760 793 3.5E-9 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_31380 22b84dcd84613661d861fe4942e3e508 1209 Pfam PF00400 WD domain, G-beta repeat 1009 1044 2.3E-4 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_31380 22b84dcd84613661d861fe4942e3e508 1209 Pfam PF00400 WD domain, G-beta repeat 729 752 0.13 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_31380 22b84dcd84613661d861fe4942e3e508 1209 Pfam PF00400 WD domain, G-beta repeat 1137 1173 3.9E-5 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_31380 22b84dcd84613661d861fe4942e3e508 1209 Pfam PF00400 WD domain, G-beta repeat 1065 1089 1.1E-4 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_31380 22b84dcd84613661d861fe4942e3e508 1209 Pfam PF00400 WD domain, G-beta repeat 1099 1132 5.4E-5 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_31380 22b84dcd84613661d861fe4942e3e508 1209 Pfam PF00400 WD domain, G-beta repeat 930 963 9.9E-6 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_31380 22b84dcd84613661d861fe4942e3e508 1209 PRINTS PR00320 G protein beta WD-40 repeat signature 992 1006 5.7E-5 T 14-10-2018 IPR020472 G-protein beta WD-40 repeat AMIS_31380 22b84dcd84613661d861fe4942e3e508 1209 PRINTS PR00320 G protein beta WD-40 repeat signature 866 880 5.7E-5 T 14-10-2018 IPR020472 G-protein beta WD-40 repeat AMIS_31380 22b84dcd84613661d861fe4942e3e508 1209 PRINTS PR00320 G protein beta WD-40 repeat signature 950 964 5.7E-5 T 14-10-2018 IPR020472 G-protein beta WD-40 repeat AMIS_31380 22b84dcd84613661d861fe4942e3e508 1209 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 950 964 - T 14-10-2018 IPR019775 WD40 repeat, conserved site AMIS_31380 22b84dcd84613661d861fe4942e3e508 1209 Gene3D G3DSA:2.130.10.10 569 745 2.2E-32 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_31380 22b84dcd84613661d861fe4942e3e508 1209 Gene3D G3DSA:3.40.50.300 105 168 2.4E-5 T 14-10-2018 AMIS_6070 3910da3866c5d3ebab8c870b29c726fa 93 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 92 7.6E-47 T 14-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 AMIS_6070 3910da3866c5d3ebab8c870b29c726fa 93 Gene3D G3DSA:3.30.860.10 1 93 5.5E-40 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_6070 3910da3866c5d3ebab8c870b29c726fa 93 PIRSF PIRSF002144 1 93 7.0E-32 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_6070 3910da3866c5d3ebab8c870b29c726fa 93 Pfam PF00203 Ribosomal protein S19 3 83 5.6E-36 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_6070 3910da3866c5d3ebab8c870b29c726fa 93 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 14-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_6070 3910da3866c5d3ebab8c870b29c726fa 93 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 3.0E-23 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_6070 3910da3866c5d3ebab8c870b29c726fa 93 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 3.0E-23 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_6070 3910da3866c5d3ebab8c870b29c726fa 93 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 3.0E-23 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_6070 3910da3866c5d3ebab8c870b29c726fa 93 SUPERFAMILY SSF54570 3 85 2.88E-35 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_6070 3910da3866c5d3ebab8c870b29c726fa 93 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.341 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_68290 b6dab7aff392e0a16ad8baad14fe20c4 477 Gene3D G3DSA:3.90.660.20 41 423 4.8E-109 T 14-10-2018 AMIS_68290 b6dab7aff392e0a16ad8baad14fe20c4 477 Pfam PF01593 Flavin containing amine oxidoreductase 15 470 4.2E-42 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 AMIS_68290 b6dab7aff392e0a16ad8baad14fe20c4 477 SUPERFAMILY SSF54373 306 424 4.32E-20 T 14-10-2018 AMIS_68290 b6dab7aff392e0a16ad8baad14fe20c4 477 Gene3D G3DSA:1.10.3110.10 112 201 4.8E-109 T 14-10-2018 AMIS_68290 b6dab7aff392e0a16ad8baad14fe20c4 477 TIGRFAM TIGR00562 proto_IX_ox: protoporphyrinogen oxidase 5 475 2.3E-53 T 14-10-2018 IPR004572 Protoporphyrinogen oxidase GO:0004729|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.4|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AMIS_68290 b6dab7aff392e0a16ad8baad14fe20c4 477 SUPERFAMILY SSF51905 6 470 6.73E-47 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_68290 b6dab7aff392e0a16ad8baad14fe20c4 477 Gene3D G3DSA:3.50.50.60 9 463 4.8E-109 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_33950 61f512fd2f4607b6c9d52baaccd2ebdb 572 SUPERFAMILY SSF51445 90 313 1.05E-30 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_33950 61f512fd2f4607b6c9d52baaccd2ebdb 572 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 425 488 1.2E-8 T 14-10-2018 AMIS_33950 61f512fd2f4607b6c9d52baaccd2ebdb 572 Pfam PF08924 Domain of unknown function (DUF1906) 103 237 8.1E-36 T 14-10-2018 IPR015020 Protein of unknown function DUF1906 AMIS_33950 61f512fd2f4607b6c9d52baaccd2ebdb 572 SUPERFAMILY SSF69318 316 559 4.32E-31 T 14-10-2018 AMIS_33950 61f512fd2f4607b6c9d52baaccd2ebdb 572 Gene3D G3DSA:2.130.10.130 418 552 1.6E-10 T 14-10-2018 IPR028994 Integrin alpha, N-terminal Reactome: R-HSA-216083 AMIS_33950 61f512fd2f4607b6c9d52baaccd2ebdb 572 Gene3D G3DSA:3.20.20.80 92 313 6.2E-30 T 14-10-2018 AMIS_18510 d7a369f9c48a87eb6d4316eafee3f9d1 120 Pfam PF04237 YjbR 12 108 3.8E-7 T 14-10-2018 IPR007351 Uncharacterised protein YjbR AMIS_11500 8c1abc746c8101195d86f825dd99e2bb 500 Gene3D G3DSA:3.30.565.10 214 367 1.5E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_11500 8c1abc746c8101195d86f825dd99e2bb 500 SUPERFAMILY SSF55785 17 125 6.11E-20 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_11500 8c1abc746c8101195d86f825dd99e2bb 500 SMART SM00086 79 119 0.0081 T 14-10-2018 IPR001610 PAC motif AMIS_11500 8c1abc746c8101195d86f825dd99e2bb 500 SMART SM00387 254 362 1.2E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_11500 8c1abc746c8101195d86f825dd99e2bb 500 SUPERFAMILY SSF47384 132 211 1.94E-7 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_11500 8c1abc746c8101195d86f825dd99e2bb 500 SMART SM00448 381 494 5.9E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_11500 8c1abc746c8101195d86f825dd99e2bb 500 SUPERFAMILY SSF52172 380 499 1.71E-26 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_11500 8c1abc746c8101195d86f825dd99e2bb 500 SMART SM00091 6 70 2.2E-6 T 14-10-2018 IPR000014 PAS domain AMIS_11500 8c1abc746c8101195d86f825dd99e2bb 500 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 255 360 2.7E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_11500 8c1abc746c8101195d86f825dd99e2bb 500 Gene3D G3DSA:3.40.50.2300 379 500 1.1E-23 T 14-10-2018 AMIS_11500 8c1abc746c8101195d86f825dd99e2bb 500 Pfam PF00989 PAS fold 11 116 2.3E-11 T 14-10-2018 IPR013767 PAS fold GO:0006355 AMIS_11500 8c1abc746c8101195d86f825dd99e2bb 500 Gene3D G3DSA:1.10.287.130 141 211 2.5E-17 T 14-10-2018 AMIS_11500 8c1abc746c8101195d86f825dd99e2bb 500 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 11 125 7.7E-18 T 14-10-2018 IPR000014 PAS domain AMIS_11500 8c1abc746c8101195d86f825dd99e2bb 500 PRINTS PR00344 Bacterial sensor protein C-terminal signature 309 319 4.7E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_11500 8c1abc746c8101195d86f825dd99e2bb 500 PRINTS PR00344 Bacterial sensor protein C-terminal signature 322 340 4.7E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_11500 8c1abc746c8101195d86f825dd99e2bb 500 PRINTS PR00344 Bacterial sensor protein C-terminal signature 291 305 4.7E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_11500 8c1abc746c8101195d86f825dd99e2bb 500 PRINTS PR00344 Bacterial sensor protein C-terminal signature 346 359 4.7E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_11500 8c1abc746c8101195d86f825dd99e2bb 500 Pfam PF00072 Response regulator receiver domain 384 495 1.7E-16 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_11500 8c1abc746c8101195d86f825dd99e2bb 500 SUPERFAMILY SSF55874 203 360 1.44E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_11500 8c1abc746c8101195d86f825dd99e2bb 500 Gene3D G3DSA:3.30.450.20 3 140 8.2E-25 T 14-10-2018 AMIS_61050 8583012d2f62459a1dbed23c1ee80c69 316 SUPERFAMILY SSF48452 74 178 2.44E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_61050 8583012d2f62459a1dbed23c1ee80c69 316 Gene3D G3DSA:1.25.40.10 6 221 2.4E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_240 7fe60d61ab8631a282649a96d1218d27 201 Gene3D G3DSA:1.10.10.60 19 60 7.3E-21 T 14-10-2018 AMIS_240 7fe60d61ab8631a282649a96d1218d27 201 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 70 2.8E-17 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_240 7fe60d61ab8631a282649a96d1218d27 201 Gene3D G3DSA:1.10.357.10 62 200 7.7E-34 T 14-10-2018 AMIS_240 7fe60d61ab8631a282649a96d1218d27 201 ProSitePatterns PS01081 TetR-type HTH domain signature. 36 67 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMIS_240 7fe60d61ab8631a282649a96d1218d27 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 45 68 5.1E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_240 7fe60d61ab8631a282649a96d1218d27 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 24 37 5.1E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_240 7fe60d61ab8631a282649a96d1218d27 201 SUPERFAMILY SSF46689 10 89 1.85E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_240 7fe60d61ab8631a282649a96d1218d27 201 SUPERFAMILY SSF48498 92 198 6.92E-9 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_24060 4863eb15a02b96c7654c00ae2faebcff 325 SUPERFAMILY SSF46785 2 59 1.71E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_24060 4863eb15a02b96c7654c00ae2faebcff 325 Pfam PF13280 WYL domain 140 318 6.3E-44 T 14-10-2018 IPR026881 WYL domain AMIS_24060 4863eb15a02b96c7654c00ae2faebcff 325 Pfam PF08279 HTH domain 5 60 5.4E-16 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 AMIS_24060 4863eb15a02b96c7654c00ae2faebcff 325 PIRSF PIRSF016838 68 324 1.3E-13 T 14-10-2018 IPR028349 Protein PafC AMIS_24060 4863eb15a02b96c7654c00ae2faebcff 325 PIRSF PIRSF016838 1 58 8.5E-4 T 14-10-2018 IPR028349 Protein PafC AMIS_24060 4863eb15a02b96c7654c00ae2faebcff 325 Gene3D G3DSA:1.10.10.10 1 64 2.1E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_51650 2b6839512f49f2ab3f84b5d813398e94 203 SMART SM00849 24 189 4.2E-36 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMIS_51650 2b6839512f49f2ab3f84b5d813398e94 203 SUPERFAMILY SSF56281 21 199 5.15E-45 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMIS_51650 2b6839512f49f2ab3f84b5d813398e94 203 Pfam PF00753 Metallo-beta-lactamase superfamily 24 189 1.1E-24 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMIS_51650 2b6839512f49f2ab3f84b5d813398e94 203 Gene3D G3DSA:3.60.15.10 19 203 1.9E-48 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMIS_6740 5f6f5b615ae837ab0479a6498063ced7 561 Pfam PF00005 ABC transporter 438 488 3.3E-7 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_6740 5f6f5b615ae837ab0479a6498063ced7 561 SUPERFAMILY SSF52540 353 555 3.01E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_6740 5f6f5b615ae837ab0479a6498063ced7 561 Pfam PF00664 ABC transporter transmembrane region 35 301 1.1E-18 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AMIS_6740 5f6f5b615ae837ab0479a6498063ced7 561 Gene3D G3DSA:3.40.50.300 352 561 7.4E-40 T 14-10-2018 AMIS_6740 5f6f5b615ae837ab0479a6498063ced7 561 ProSitePatterns PS00211 ABC transporters family signature. 460 474 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_6740 5f6f5b615ae837ab0479a6498063ced7 561 SUPERFAMILY SSF90123 19 334 1.31E-51 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMIS_6740 5f6f5b615ae837ab0479a6498063ced7 561 Gene3D G3DSA:1.20.1560.10 6 334 9.5E-50 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMIS_30030 cdaa596cea6fc7c86725fc0558981825 447 SUPERFAMILY SSF158472 181 230 3.79E-8 T 14-10-2018 AMIS_30030 cdaa596cea6fc7c86725fc0558981825 447 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 340 443 2.9E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_30030 cdaa596cea6fc7c86725fc0558981825 447 SUPERFAMILY SSF47384 217 299 4.71E-15 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_30030 cdaa596cea6fc7c86725fc0558981825 447 SMART SM00304 181 233 4.6E-13 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_30030 cdaa596cea6fc7c86725fc0558981825 447 SMART SM00387 339 446 5.2E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_30030 cdaa596cea6fc7c86725fc0558981825 447 Pfam PF00512 His Kinase A (phospho-acceptor) domain 236 300 2.0E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_30030 cdaa596cea6fc7c86725fc0558981825 447 Gene3D G3DSA:1.10.287.130 185 302 1.4E-28 T 14-10-2018 AMIS_30030 cdaa596cea6fc7c86725fc0558981825 447 SMART SM00388 234 301 3.8E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_30030 cdaa596cea6fc7c86725fc0558981825 447 Gene3D G3DSA:3.30.565.10 304 447 1.5E-24 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_30030 cdaa596cea6fc7c86725fc0558981825 447 Pfam PF00672 HAMP domain 181 229 5.4E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_30030 cdaa596cea6fc7c86725fc0558981825 447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 430 443 1.9E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_30030 cdaa596cea6fc7c86725fc0558981825 447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 370 384 1.9E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_30030 cdaa596cea6fc7c86725fc0558981825 447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 424 1.9E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_30030 cdaa596cea6fc7c86725fc0558981825 447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 398 1.9E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_30030 cdaa596cea6fc7c86725fc0558981825 447 SUPERFAMILY SSF55874 290 443 2.36E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_6330 08a8ee41a39833f7ac33f61add41b2bd 193 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 25.942 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_6330 08a8ee41a39833f7ac33f61add41b2bd 193 Gene3D G3DSA:3.90.1030.10 1 116 3.7E-43 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_6330 08a8ee41a39833f7ac33f61add41b2bd 193 Pfam PF01196 Ribosomal protein L17 21 116 3.6E-36 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_6330 08a8ee41a39833f7ac33f61add41b2bd 193 TIGRFAM TIGR00059 L17: ribosomal protein bL17 9 117 1.7E-39 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_6330 08a8ee41a39833f7ac33f61add41b2bd 193 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_6330 08a8ee41a39833f7ac33f61add41b2bd 193 SUPERFAMILY SSF64263 1 117 3.01E-45 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_46300 10b0e1815ec853fc951da242820d27dc 239 SUPERFAMILY SSF51735 2 236 1.39E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_46300 10b0e1815ec853fc951da242820d27dc 239 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 234 3.6E-28 T 14-10-2018 AMIS_46300 10b0e1815ec853fc951da242820d27dc 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.7E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_46300 10b0e1815ec853fc951da242820d27dc 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 2.7E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_46300 10b0e1815ec853fc951da242820d27dc 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 181 2.7E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_46300 10b0e1815ec853fc951da242820d27dc 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 221 2.7E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_46300 10b0e1815ec853fc951da242820d27dc 239 Gene3D G3DSA:3.40.50.720 1 238 2.4E-42 T 14-10-2018 AMIS_54430 130050d0b8d19ac5597f47db248baad0 1309 Gene3D G3DSA:3.40.50.300 47 258 1.6E-74 T 14-10-2018 AMIS_54430 130050d0b8d19ac5597f47db248baad0 1309 SUPERFAMILY SSF52540 75 606 9.35E-109 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_54430 130050d0b8d19ac5597f47db248baad0 1309 Gene3D G3DSA:3.40.50.300 259 434 6.7E-55 T 14-10-2018 AMIS_54430 130050d0b8d19ac5597f47db248baad0 1309 Pfam PF04408 Helicase associated domain (HA2) 478 562 4.0E-19 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 AMIS_54430 130050d0b8d19ac5597f47db248baad0 1309 Pfam PF00270 DEAD/DEAH box helicase 90 234 1.1E-6 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMIS_54430 130050d0b8d19ac5597f47db248baad0 1309 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 631 708 6.8E-20 T 14-10-2018 IPR011709 Domain of unknown function DUF1605 AMIS_54430 130050d0b8d19ac5597f47db248baad0 1309 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 16 1305 0.0 T 14-10-2018 IPR010222 RNA helicase HrpA GO:0004004 AMIS_54430 130050d0b8d19ac5597f47db248baad0 1309 Pfam PF11898 Domain of unknown function (DUF3418) 721 1305 8.4E-220 T 14-10-2018 IPR024590 RNA helicase HrpA, C-terminal AMIS_54430 130050d0b8d19ac5597f47db248baad0 1309 SMART SM00487 76 265 2.4E-27 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMIS_54430 130050d0b8d19ac5597f47db248baad0 1309 SMART SM00847 476 565 1.7E-38 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 AMIS_54430 130050d0b8d19ac5597f47db248baad0 1309 SMART SM00382 93 396 1.4E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_54430 130050d0b8d19ac5597f47db248baad0 1309 Pfam PF00271 Helicase conserved C-terminal domain 300 415 1.5E-11 T 14-10-2018 IPR001650 Helicase, C-terminal AMIS_54430 130050d0b8d19ac5597f47db248baad0 1309 SMART SM00490 316 416 3.5E-16 T 14-10-2018 IPR001650 Helicase, C-terminal AMIS_54430 130050d0b8d19ac5597f47db248baad0 1309 Gene3D G3DSA:1.20.120.1080 461 558 3.2E-20 T 14-10-2018 AMIS_8180 67be1b5ff672e7623829ec58d1a83b11 320 Gene3D G3DSA:3.10.20.30 225 320 6.5E-25 T 14-10-2018 IPR012675 Beta-grasp domain superfamily AMIS_8180 67be1b5ff672e7623829ec58d1a83b11 320 SUPERFAMILY SSF54292 212 318 2.62E-26 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AMIS_8180 67be1b5ff672e7623829ec58d1a83b11 320 Gene3D G3DSA:2.40.30.10 5 106 5.2E-28 T 14-10-2018 AMIS_8180 67be1b5ff672e7623829ec58d1a83b11 320 PRINTS PR00409 Phthalate dioxygenase reductase family signature 35 45 9.3E-28 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AMIS_8180 67be1b5ff672e7623829ec58d1a83b11 320 PRINTS PR00409 Phthalate dioxygenase reductase family signature 116 135 9.3E-28 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AMIS_8180 67be1b5ff672e7623829ec58d1a83b11 320 PRINTS PR00409 Phthalate dioxygenase reductase family signature 191 199 9.3E-28 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AMIS_8180 67be1b5ff672e7623829ec58d1a83b11 320 PRINTS PR00409 Phthalate dioxygenase reductase family signature 57 71 9.3E-28 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AMIS_8180 67be1b5ff672e7623829ec58d1a83b11 320 PRINTS PR00409 Phthalate dioxygenase reductase family signature 45 57 9.3E-28 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AMIS_8180 67be1b5ff672e7623829ec58d1a83b11 320 PRINTS PR00409 Phthalate dioxygenase reductase family signature 81 95 9.3E-28 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AMIS_8180 67be1b5ff672e7623829ec58d1a83b11 320 SUPERFAMILY SSF52343 103 225 1.83E-24 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMIS_8180 67be1b5ff672e7623829ec58d1a83b11 320 SUPERFAMILY SSF63380 7 105 4.3E-27 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AMIS_8180 67be1b5ff672e7623829ec58d1a83b11 320 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 242 310 2.4E-10 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AMIS_8180 67be1b5ff672e7623829ec58d1a83b11 320 Gene3D G3DSA:3.40.50.80 110 221 8.6E-21 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMIS_8180 67be1b5ff672e7623829ec58d1a83b11 320 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 269 277 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AMIS_70180 fa49164727bfbe66cfa3e2d68f9efdd9 107 Pfam PF10611 Protein of unknown function (DUF2469) 1 100 2.7E-53 T 14-10-2018 IPR019592 Protein of unknown function DUF2469 AMIS_22470 d26b04153ffca9e84fd72bfeb90ef307 250 SUPERFAMILY SSF54001 2 242 5.89E-66 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily AMIS_22470 d26b04153ffca9e84fd72bfeb90ef307 250 Gene3D G3DSA:3.30.2140.10 10 238 3.1E-73 T 14-10-2018 AMIS_22470 d26b04153ffca9e84fd72bfeb90ef307 250 PRINTS PR01543 Arylamine N-acetyltransferase signature 41 64 1.7E-10 T 14-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 AMIS_22470 d26b04153ffca9e84fd72bfeb90ef307 250 PRINTS PR01543 Arylamine N-acetyltransferase signature 17 40 1.7E-10 T 14-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 AMIS_22470 d26b04153ffca9e84fd72bfeb90ef307 250 PRINTS PR01543 Arylamine N-acetyltransferase signature 65 87 1.7E-10 T 14-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 AMIS_22470 d26b04153ffca9e84fd72bfeb90ef307 250 Pfam PF00797 N-acetyltransferase 20 241 1.1E-61 T 14-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 AMIS_22470 d26b04153ffca9e84fd72bfeb90ef307 250 Gene3D G3DSA:2.40.128.150 81 168 3.1E-73 T 14-10-2018 AMIS_9830 f2b80256c90d856af6cc9bf34fa64f85 213 Pfam PF03358 NADPH-dependent FMN reductase 2 133 2.1E-24 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AMIS_9830 f2b80256c90d856af6cc9bf34fa64f85 213 SUPERFAMILY SSF52218 3 170 4.19E-27 T 14-10-2018 IPR029039 Flavoprotein-like superfamily AMIS_9830 f2b80256c90d856af6cc9bf34fa64f85 213 Gene3D G3DSA:3.40.50.360 1 192 1.4E-32 T 14-10-2018 IPR029039 Flavoprotein-like superfamily AMIS_9360 34e61088b872742b300ace3397c0de46 207 Gene3D G3DSA:3.40.630.30 3 164 2.1E-45 T 14-10-2018 AMIS_9360 34e61088b872742b300ace3397c0de46 207 SUPERFAMILY SSF55729 5 161 2.19E-28 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_9360 34e61088b872742b300ace3397c0de46 207 Pfam PF00583 Acetyltransferase (GNAT) family 32 138 7.8E-17 T 14-10-2018 IPR000182 GNAT domain AMIS_850 b0621498e823f866dc41adbcd9b32e90 400 Gene3D G3DSA:2.60.260.20 291 388 6.0E-26 T 14-10-2018 AMIS_850 b0621498e823f866dc41adbcd9b32e90 400 SUPERFAMILY SSF46565 9 113 2.88E-29 T 14-10-2018 IPR036869 Chaperone J-domain superfamily AMIS_850 b0621498e823f866dc41adbcd9b32e90 400 SMART SM00271 9 67 3.6E-28 T 14-10-2018 IPR001623 DnaJ domain AMIS_850 b0621498e823f866dc41adbcd9b32e90 400 Gene3D G3DSA:2.10.230.10 179 245 8.1E-19 T 14-10-2018 AMIS_850 b0621498e823f866dc41adbcd9b32e90 400 Pfam PF01556 DnaJ C terminal domain 154 366 5.6E-35 T 14-10-2018 IPR002939 Chaperone DnaJ, C-terminal AMIS_850 b0621498e823f866dc41adbcd9b32e90 400 ProSitePatterns PS00636 Nt-dnaJ domain signature. 52 71 - T 14-10-2018 IPR018253 DnaJ domain, conserved site AMIS_850 b0621498e823f866dc41adbcd9b32e90 400 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 7 399 37.476 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 AMIS_850 b0621498e823f866dc41adbcd9b32e90 400 Pfam PF00684 DnaJ central domain 181 241 1.4E-12 T 14-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 AMIS_850 b0621498e823f866dc41adbcd9b32e90 400 SUPERFAMILY SSF57938 168 244 1.83E-17 T 14-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily AMIS_850 b0621498e823f866dc41adbcd9b32e90 400 Gene3D G3DSA:1.10.287.110 7 143 2.3E-30 T 14-10-2018 IPR036869 Chaperone J-domain superfamily AMIS_850 b0621498e823f866dc41adbcd9b32e90 400 PRINTS PR00625 DnaJ domain signature 67 86 2.7E-23 T 14-10-2018 IPR001623 DnaJ domain AMIS_850 b0621498e823f866dc41adbcd9b32e90 400 PRINTS PR00625 DnaJ domain signature 47 67 2.7E-23 T 14-10-2018 IPR001623 DnaJ domain AMIS_850 b0621498e823f866dc41adbcd9b32e90 400 PRINTS PR00625 DnaJ domain signature 30 45 2.7E-23 T 14-10-2018 IPR001623 DnaJ domain AMIS_850 b0621498e823f866dc41adbcd9b32e90 400 PRINTS PR00625 DnaJ domain signature 12 30 2.7E-23 T 14-10-2018 IPR001623 DnaJ domain AMIS_850 b0621498e823f866dc41adbcd9b32e90 400 Pfam PF00226 DnaJ domain 10 72 4.7E-26 T 14-10-2018 IPR001623 DnaJ domain AMIS_850 b0621498e823f866dc41adbcd9b32e90 400 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 10 382 1.9E-118 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 AMIS_850 b0621498e823f866dc41adbcd9b32e90 400 SUPERFAMILY SSF49493 147 300 3.79E-17 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AMIS_850 b0621498e823f866dc41adbcd9b32e90 400 SUPERFAMILY SSF49493 293 377 5.1E-20 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AMIS_9540 53c5f0986c0591bad49bc0d40cbf7edd 543 Pfam PF17392 Urocanase C-terminal domain 343 531 2.1E-90 T 14-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AMIS_9540 53c5f0986c0591bad49bc0d40cbf7edd 543 Gene3D G3DSA:3.40.50.10730 134 340 2.4E-240 T 14-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AMIS_9540 53c5f0986c0591bad49bc0d40cbf7edd 543 Pfam PF17391 Urocanase N-terminal domain 4 130 5.6E-58 T 14-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AMIS_9540 53c5f0986c0591bad49bc0d40cbf7edd 543 Pfam PF01175 Urocanase Rossmann-like domain 133 340 1.6E-81 T 14-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AMIS_9540 53c5f0986c0591bad49bc0d40cbf7edd 543 ProSitePatterns PS01233 Urocanase signature. 433 448 - T 14-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AMIS_9540 53c5f0986c0591bad49bc0d40cbf7edd 543 Gene3D G3DSA:3.40.1770.10 13 531 2.4E-240 T 14-10-2018 AMIS_9540 53c5f0986c0591bad49bc0d40cbf7edd 543 TIGRFAM TIGR01228 hutU: urocanate hydratase 3 532 3.6E-265 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AMIS_9540 53c5f0986c0591bad49bc0d40cbf7edd 543 PIRSF PIRSF001423 1 542 1.3E-267 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AMIS_9540 53c5f0986c0591bad49bc0d40cbf7edd 543 Hamap MF_00577 Urocanate hydratase [hutU]. 1 543 47.997 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AMIS_9540 53c5f0986c0591bad49bc0d40cbf7edd 543 SUPERFAMILY SSF111326 3 534 8.11E-240 T 14-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AMIS_16100 7da9fa53c0b6fbe1af7a035fc3be8414 333 Gene3D G3DSA:3.40.50.720 4 329 2.3E-152 T 14-10-2018 AMIS_16100 7da9fa53c0b6fbe1af7a035fc3be8414 333 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 326 4.6E-135 T 14-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_16100 7da9fa53c0b6fbe1af7a035fc3be8414 333 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 151 158 - T 14-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_16100 7da9fa53c0b6fbe1af7a035fc3be8414 333 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 103 1.8E-36 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_16100 7da9fa53c0b6fbe1af7a035fc3be8414 333 PIRSF PIRSF000149 1 332 7.2E-135 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_16100 7da9fa53c0b6fbe1af7a035fc3be8414 333 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 158 314 3.5E-70 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_16100 7da9fa53c0b6fbe1af7a035fc3be8414 333 SUPERFAMILY SSF51735 3 168 3.11E-62 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_16100 7da9fa53c0b6fbe1af7a035fc3be8414 333 SMART SM00846 3 153 7.7E-91 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_16100 7da9fa53c0b6fbe1af7a035fc3be8414 333 Gene3D G3DSA:3.30.360.10 152 316 2.3E-152 T 14-10-2018 AMIS_16100 7da9fa53c0b6fbe1af7a035fc3be8414 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 270 285 4.5E-39 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_16100 7da9fa53c0b6fbe1af7a035fc3be8414 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 147 165 4.5E-39 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_16100 7da9fa53c0b6fbe1af7a035fc3be8414 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 110 123 4.5E-39 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_16100 7da9fa53c0b6fbe1af7a035fc3be8414 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 174 190 4.5E-39 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_16100 7da9fa53c0b6fbe1af7a035fc3be8414 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 230 247 4.5E-39 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_16100 7da9fa53c0b6fbe1af7a035fc3be8414 333 SUPERFAMILY SSF55347 153 315 9.35E-73 T 14-10-2018 AMIS_70870 106486bdd1615cc90ac29c662a1302f3 330 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 4 157 2.1E-49 T 14-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AMIS_70870 106486bdd1615cc90ac29c662a1302f3 330 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 1 321 35.544 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AMIS_70870 106486bdd1615cc90ac29c662a1302f3 330 SUPERFAMILY SSF51735 1 179 4.11E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_70870 106486bdd1615cc90ac29c662a1302f3 330 Gene3D G3DSA:3.40.50.720 1 186 3.8E-61 T 14-10-2018 AMIS_70870 106486bdd1615cc90ac29c662a1302f3 330 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 5 22 3.6E-43 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AMIS_70870 106486bdd1615cc90ac29c662a1302f3 330 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 172 196 3.6E-43 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AMIS_70870 106486bdd1615cc90ac29c662a1302f3 330 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 55 82 3.6E-43 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AMIS_70870 106486bdd1615cc90ac29c662a1302f3 330 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 132 152 3.6E-43 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AMIS_70870 106486bdd1615cc90ac29c662a1302f3 330 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 237 254 3.6E-43 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AMIS_70870 106486bdd1615cc90ac29c662a1302f3 330 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 197 221 3.6E-43 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AMIS_70870 106486bdd1615cc90ac29c662a1302f3 330 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 187 208 - T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AMIS_70870 106486bdd1615cc90ac29c662a1302f3 330 SUPERFAMILY SSF48179 178 330 1.7E-50 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMIS_70870 106486bdd1615cc90ac29c662a1302f3 330 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 179 319 5.7E-47 T 14-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AMIS_70870 106486bdd1615cc90ac29c662a1302f3 330 Gene3D G3DSA:1.10.1040.10 188 330 9.0E-47 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AMIS_70870 106486bdd1615cc90ac29c662a1302f3 330 PIRSF PIRSF000114 1 330 5.3E-98 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AMIS_67630 5f182fda2470b6d3b940d384ac1eb512 582 Pfam PF10081 Alpha/beta-hydrolase family 293 577 4.1E-113 T 14-10-2018 IPR027787 Alpha/beta-hydrolase, catalytic domain AMIS_67630 5f182fda2470b6d3b940d384ac1eb512 582 Pfam PF15420 Alpha/beta-hydrolase family N-terminus 71 276 7.6E-59 T 14-10-2018 IPR027788 Alpha/beta-hydrolase, N-terminal domain AMIS_18220 2e231aaedc92eabeaab454bd4afe0cac 269 SUPERFAMILY SSF63380 13 133 9.07E-8 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AMIS_18220 2e231aaedc92eabeaab454bd4afe0cac 269 Gene3D G3DSA:2.40.30.10 4 138 1.3E-30 T 14-10-2018 AMIS_18220 2e231aaedc92eabeaab454bd4afe0cac 269 Pfam PF04954 Siderophore-interacting protein 147 265 2.8E-33 T 14-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain AMIS_18220 2e231aaedc92eabeaab454bd4afe0cac 269 Pfam PF08021 Siderophore-interacting FAD-binding domain 19 135 2.7E-28 T 14-10-2018 IPR013113 FAD-binding 9, siderophore-interacting AMIS_18220 2e231aaedc92eabeaab454bd4afe0cac 269 Gene3D G3DSA:3.40.50.80 142 269 2.4E-39 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMIS_39600 ca44ffc97926f8d0d7740c30bcf50553 654 SMART SM00387 532 644 5.1E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_39600 ca44ffc97926f8d0d7740c30bcf50553 654 Gene3D G3DSA:3.30.450.20 118 249 7.9E-10 T 14-10-2018 AMIS_39600 ca44ffc97926f8d0d7740c30bcf50553 654 SUPERFAMILY SSF55785 121 237 3.32E-9 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_39600 ca44ffc97926f8d0d7740c30bcf50553 654 Pfam PF08448 PAS fold 137 241 2.2E-6 T 14-10-2018 IPR013656 PAS fold-4 AMIS_39600 ca44ffc97926f8d0d7740c30bcf50553 654 SUPERFAMILY SSF47384 420 496 5.3E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_39600 ca44ffc97926f8d0d7740c30bcf50553 654 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 532 642 1.8E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_39600 ca44ffc97926f8d0d7740c30bcf50553 654 Gene3D G3DSA:3.30.565.10 498 646 2.6E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_39600 ca44ffc97926f8d0d7740c30bcf50553 654 SUPERFAMILY SSF55781 264 421 9.48E-6 T 14-10-2018 AMIS_39600 ca44ffc97926f8d0d7740c30bcf50553 654 SMART SM00388 429 495 1.2E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_39600 ca44ffc97926f8d0d7740c30bcf50553 654 SUPERFAMILY SSF55874 486 644 5.89E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_39600 ca44ffc97926f8d0d7740c30bcf50553 654 PRINTS PR00344 Bacterial sensor protein C-terminal signature 569 583 6.4E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_39600 ca44ffc97926f8d0d7740c30bcf50553 654 PRINTS PR00344 Bacterial sensor protein C-terminal signature 587 597 6.4E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_39600 ca44ffc97926f8d0d7740c30bcf50553 654 PRINTS PR00344 Bacterial sensor protein C-terminal signature 604 622 6.4E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_39600 ca44ffc97926f8d0d7740c30bcf50553 654 PRINTS PR00344 Bacterial sensor protein C-terminal signature 628 641 6.4E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_39600 ca44ffc97926f8d0d7740c30bcf50553 654 Gene3D G3DSA:3.30.450.20 1 108 1.4E-19 T 14-10-2018 AMIS_39600 ca44ffc97926f8d0d7740c30bcf50553 654 Gene3D G3DSA:3.30.450.40 261 424 3.4E-5 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_39600 ca44ffc97926f8d0d7740c30bcf50553 654 Gene3D G3DSA:1.10.287.130 425 497 2.4E-14 T 14-10-2018 AMIS_39600 ca44ffc97926f8d0d7740c30bcf50553 654 Pfam PF00512 His Kinase A (phospho-acceptor) domain 431 494 9.8E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_76520 0a8c952a6c934436d1269fabca2f2492 281 Gene3D G3DSA:3.40.50.150 72 269 2.1E-53 T 14-10-2018 AMIS_76520 0a8c952a6c934436d1269fabca2f2492 281 PRINTS PR00996 Glutamate methyltransferase family signature 27 40 4.1E-36 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMIS_76520 0a8c952a6c934436d1269fabca2f2492 281 PRINTS PR00996 Glutamate methyltransferase family signature 66 78 4.1E-36 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMIS_76520 0a8c952a6c934436d1269fabca2f2492 281 PRINTS PR00996 Glutamate methyltransferase family signature 106 126 4.1E-36 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMIS_76520 0a8c952a6c934436d1269fabca2f2492 281 PRINTS PR00996 Glutamate methyltransferase family signature 226 249 4.1E-36 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMIS_76520 0a8c952a6c934436d1269fabca2f2492 281 PRINTS PR00996 Glutamate methyltransferase family signature 139 155 4.1E-36 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMIS_76520 0a8c952a6c934436d1269fabca2f2492 281 PRINTS PR00996 Glutamate methyltransferase family signature 207 221 4.1E-36 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMIS_76520 0a8c952a6c934436d1269fabca2f2492 281 Pfam PF03705 CheR methyltransferase, all-alpha domain 7 58 2.9E-8 T 14-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AMIS_76520 0a8c952a6c934436d1269fabca2f2492 281 Pfam PF01739 CheR methyltransferase, SAM binding domain 73 259 1.2E-53 T 14-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal AMIS_76520 0a8c952a6c934436d1269fabca2f2492 281 SMART SM00138 5 267 5.4E-85 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMIS_76520 0a8c952a6c934436d1269fabca2f2492 281 SUPERFAMILY SSF47757 2 72 3.27E-13 T 14-10-2018 AMIS_76520 0a8c952a6c934436d1269fabca2f2492 281 Gene3D G3DSA:1.10.155.10 1 71 1.0E-10 T 14-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily AMIS_76520 0a8c952a6c934436d1269fabca2f2492 281 SUPERFAMILY SSF53335 73 258 3.28E-48 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_10050 40f382e863d1a1db745a376d64679961 325 SUPERFAMILY SSF46689 217 267 2.45E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_10050 40f382e863d1a1db745a376d64679961 325 SMART SM00342 234 317 6.2E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMIS_10050 40f382e863d1a1db745a376d64679961 325 Gene3D G3DSA:3.40.50.880 9 211 3.1E-57 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_10050 40f382e863d1a1db745a376d64679961 325 Gene3D G3DSA:1.10.10.60 214 322 3.8E-23 T 14-10-2018 AMIS_10050 40f382e863d1a1db745a376d64679961 325 Pfam PF12833 Helix-turn-helix domain 240 318 4.3E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMIS_10050 40f382e863d1a1db745a376d64679961 325 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 271 313 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AMIS_10050 40f382e863d1a1db745a376d64679961 325 SUPERFAMILY SSF52317 10 199 5.67E-48 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_10050 40f382e863d1a1db745a376d64679961 325 SUPERFAMILY SSF46689 271 320 1.84E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_10050 40f382e863d1a1db745a376d64679961 325 Pfam PF01965 DJ-1/PfpI family 12 178 3.2E-15 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 AMIS_56950 9779fbc05d0e156fd3a22389df921065 447 SUPERFAMILY SSF51905 1 184 8.1E-31 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_56950 9779fbc05d0e156fd3a22389df921065 447 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 332 3.3E-50 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMIS_56950 9779fbc05d0e156fd3a22389df921065 447 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 160 185 6.8E-6 T 14-10-2018 AMIS_56950 9779fbc05d0e156fd3a22389df921065 447 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 6.8E-6 T 14-10-2018 AMIS_56950 9779fbc05d0e156fd3a22389df921065 447 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 304 311 6.8E-6 T 14-10-2018 AMIS_56950 9779fbc05d0e156fd3a22389df921065 447 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 1.5E-9 T 14-10-2018 AMIS_56950 9779fbc05d0e156fd3a22389df921065 447 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 1.5E-9 T 14-10-2018 AMIS_56950 9779fbc05d0e156fd3a22389df921065 447 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 289 311 1.5E-9 T 14-10-2018 AMIS_56950 9779fbc05d0e156fd3a22389df921065 447 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 160 178 1.5E-9 T 14-10-2018 AMIS_56950 9779fbc05d0e156fd3a22389df921065 447 Gene3D G3DSA:3.50.50.100 1 406 2.5E-114 T 14-10-2018 AMIS_56950 9779fbc05d0e156fd3a22389df921065 447 SUPERFAMILY SSF51905 148 346 7.41E-23 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_23480 cd68ca12da8d49d73c290026a82cb85e 267 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 262 1.1E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_23480 cd68ca12da8d49d73c290026a82cb85e 267 Gene3D G3DSA:1.10.3720.10 1 258 1.2E-59 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_23480 cd68ca12da8d49d73c290026a82cb85e 267 SUPERFAMILY SSF161098 2 267 1.2E-66 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_69450 546c57505d07ce9661b8317ab239a8b3 225 Gene3D G3DSA:1.10.10.10 146 224 5.6E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_69450 546c57505d07ce9661b8317ab239a8b3 225 PRINTS PR00103 cAMP-dependent protein kinase signature 48 62 1.0E-5 T 14-10-2018 AMIS_69450 546c57505d07ce9661b8317ab239a8b3 225 PRINTS PR00103 cAMP-dependent protein kinase signature 90 101 1.0E-5 T 14-10-2018 AMIS_69450 546c57505d07ce9661b8317ab239a8b3 225 PRINTS PR00103 cAMP-dependent protein kinase signature 78 87 1.0E-5 T 14-10-2018 AMIS_69450 546c57505d07ce9661b8317ab239a8b3 225 PRINTS PR00103 cAMP-dependent protein kinase signature 33 47 1.0E-5 T 14-10-2018 AMIS_69450 546c57505d07ce9661b8317ab239a8b3 225 Pfam PF13545 Crp-like helix-turn-helix domain 149 220 7.6E-8 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMIS_69450 546c57505d07ce9661b8317ab239a8b3 225 Gene3D G3DSA:2.60.120.10 10 143 1.9E-26 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMIS_69450 546c57505d07ce9661b8317ab239a8b3 225 SUPERFAMILY SSF51206 10 141 1.7E-25 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like AMIS_69450 546c57505d07ce9661b8317ab239a8b3 225 SUPERFAMILY SSF46785 146 222 8.39E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_69450 546c57505d07ce9661b8317ab239a8b3 225 Pfam PF00027 Cyclic nucleotide-binding domain 32 118 1.1E-16 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain AMIS_69450 546c57505d07ce9661b8317ab239a8b3 225 SMART SM00100 12 130 1.8E-14 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain AMIS_46280 026f611d854560a9e8e60f8e48ba6fbd 340 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AMIS_46280 026f611d854560a9e8e60f8e48ba6fbd 340 Pfam PF00107 Zinc-binding dehydrogenase 178 296 8.5E-17 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMIS_46280 026f611d854560a9e8e60f8e48ba6fbd 340 Gene3D G3DSA:3.90.180.10 17 334 2.0E-90 T 14-10-2018 AMIS_46280 026f611d854560a9e8e60f8e48ba6fbd 340 SUPERFAMILY SSF51735 142 306 3.88E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_46280 026f611d854560a9e8e60f8e48ba6fbd 340 Gene3D G3DSA:3.40.50.720 151 287 2.0E-90 T 14-10-2018 AMIS_46280 026f611d854560a9e8e60f8e48ba6fbd 340 SMART SM00829 12 336 1.5E-5 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMIS_46280 026f611d854560a9e8e60f8e48ba6fbd 340 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 136 5.6E-26 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMIS_46280 026f611d854560a9e8e60f8e48ba6fbd 340 SUPERFAMILY SSF50129 3 173 1.03E-43 T 14-10-2018 IPR011032 GroES-like superfamily AMIS_79710 5cba68ac084318d0e8b035d19d0f483a 377 SUPERFAMILY SSF55874 266 372 1.28E-15 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_79710 5cba68ac084318d0e8b035d19d0f483a 377 Pfam PF07730 Histidine kinase 177 241 1.8E-17 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMIS_79710 5cba68ac084318d0e8b035d19d0f483a 377 Gene3D G3DSA:3.30.565.10 249 373 5.7E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_57970 c4ddade616ca4d23248424e37751f6fb 280 TIGRFAM TIGR00861 MIP: MIP family channel proteins 16 247 4.5E-65 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AMIS_57970 c4ddade616ca4d23248424e37751f6fb 280 ProSitePatterns PS00221 MIP family signature. 68 76 - T 14-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 AMIS_57970 c4ddade616ca4d23248424e37751f6fb 280 Pfam PF00230 Major intrinsic protein 11 247 1.0E-53 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AMIS_57970 c4ddade616ca4d23248424e37751f6fb 280 Gene3D G3DSA:1.20.1080.10 6 255 8.6E-83 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AMIS_57970 c4ddade616ca4d23248424e37751f6fb 280 PRINTS PR00783 Major intrinsic protein family signature 12 31 3.0E-49 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AMIS_57970 c4ddade616ca4d23248424e37751f6fb 280 PRINTS PR00783 Major intrinsic protein family signature 87 106 3.0E-49 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AMIS_57970 c4ddade616ca4d23248424e37751f6fb 280 PRINTS PR00783 Major intrinsic protein family signature 148 166 3.0E-49 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AMIS_57970 c4ddade616ca4d23248424e37751f6fb 280 PRINTS PR00783 Major intrinsic protein family signature 50 74 3.0E-49 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AMIS_57970 c4ddade616ca4d23248424e37751f6fb 280 PRINTS PR00783 Major intrinsic protein family signature 181 203 3.0E-49 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AMIS_57970 c4ddade616ca4d23248424e37751f6fb 280 PRINTS PR00783 Major intrinsic protein family signature 230 250 3.0E-49 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AMIS_57970 c4ddade616ca4d23248424e37751f6fb 280 SUPERFAMILY SSF81338 12 251 9.42E-67 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AMIS_76050 45f320bee3458d36431b514c00e1bcba 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 168 4.1E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_76050 45f320bee3458d36431b514c00e1bcba 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 4.1E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_76050 45f320bee3458d36431b514c00e1bcba 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 4.1E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_76050 45f320bee3458d36431b514c00e1bcba 251 SUPERFAMILY SSF51735 4 236 7.97E-62 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_76050 45f320bee3458d36431b514c00e1bcba 251 Gene3D G3DSA:3.40.50.720 4 238 9.7E-64 T 14-10-2018 AMIS_76050 45f320bee3458d36431b514c00e1bcba 251 Pfam PF00106 short chain dehydrogenase 3 185 3.3E-48 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_76050 45f320bee3458d36431b514c00e1bcba 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 7.0E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_76050 45f320bee3458d36431b514c00e1bcba 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 7.0E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_76050 45f320bee3458d36431b514c00e1bcba 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 7.0E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_76050 45f320bee3458d36431b514c00e1bcba 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 7.0E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_76050 45f320bee3458d36431b514c00e1bcba 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 7.0E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_76050 45f320bee3458d36431b514c00e1bcba 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 7.0E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_61900 e86994088ba8c6c3422293a231971ae5 290 SMART SM00062 55 283 1.3E-29 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMIS_61900 e86994088ba8c6c3422293a231971ae5 290 SUPERFAMILY SSF53850 34 280 2.39E-48 T 14-10-2018 AMIS_61900 e86994088ba8c6c3422293a231971ae5 290 Gene3D G3DSA:3.40.190.10 146 242 7.9E-44 T 14-10-2018 AMIS_61900 e86994088ba8c6c3422293a231971ae5 290 Gene3D G3DSA:3.40.190.10 54 273 7.9E-44 T 14-10-2018 AMIS_61900 e86994088ba8c6c3422293a231971ae5 290 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 56 281 2.4E-42 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMIS_61900 e86994088ba8c6c3422293a231971ae5 290 SMART SM00079 55 282 0.0014 T 14-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 AMIS_32300 3569c4ec27e2e716fbe96092f7ba27b5 427 SUPERFAMILY SSF48452 76 424 6.9E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_32300 3569c4ec27e2e716fbe96092f7ba27b5 427 SUPERFAMILY SSF47413 5 68 2.82E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_32300 3569c4ec27e2e716fbe96092f7ba27b5 427 Gene3D G3DSA:1.25.40.10 318 427 1.3E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_32300 3569c4ec27e2e716fbe96092f7ba27b5 427 SUPERFAMILY SSF48452 73 183 2.0E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_32300 3569c4ec27e2e716fbe96092f7ba27b5 427 SMART SM00530 10 64 1.1E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMIS_32300 3569c4ec27e2e716fbe96092f7ba27b5 427 Gene3D G3DSA:1.25.40.10 73 226 1.8E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_32300 3569c4ec27e2e716fbe96092f7ba27b5 427 Gene3D G3DSA:1.10.260.40 3 69 2.4E-14 T 14-10-2018 AMIS_32300 3569c4ec27e2e716fbe96092f7ba27b5 427 Pfam PF01381 Helix-turn-helix 11 63 2.4E-11 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMIS_6360 b4cd2f02771b73d3a4da0f00e5297aa7 201 Pfam PF05175 Methyltransferase small domain 31 194 1.8E-27 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 AMIS_6360 b4cd2f02771b73d3a4da0f00e5297aa7 201 Gene3D G3DSA:3.40.50.150 18 200 3.5E-43 T 14-10-2018 AMIS_6360 b4cd2f02771b73d3a4da0f00e5297aa7 201 SUPERFAMILY SSF53335 20 194 1.84E-26 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_31940 636a32e66d6539ca265c8665c9f03525 159 SUPERFAMILY SSF46785 16 139 1.17E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_31940 636a32e66d6539ca265c8665c9f03525 159 Gene3D G3DSA:1.10.10.10 15 140 8.1E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_31940 636a32e66d6539ca265c8665c9f03525 159 Pfam PF13463 Winged helix DNA-binding domain 36 100 3.7E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_31940 636a32e66d6539ca265c8665c9f03525 159 SMART SM00347 25 127 7.0E-4 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_34230 f2f8eb346b99d276e1128a0fd3eff124 213 Gene3D G3DSA:1.10.10.10 144 212 1.5E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_34230 f2f8eb346b99d276e1128a0fd3eff124 213 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 192 1.8E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_34230 f2f8eb346b99d276e1128a0fd3eff124 213 Pfam PF00072 Response regulator receiver domain 3 97 1.0E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_34230 f2f8eb346b99d276e1128a0fd3eff124 213 SUPERFAMILY SSF46894 138 193 1.84E-14 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_34230 f2f8eb346b99d276e1128a0fd3eff124 213 Gene3D G3DSA:3.40.50.2300 1 143 1.1E-22 T 14-10-2018 AMIS_34230 f2f8eb346b99d276e1128a0fd3eff124 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 1.1E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_34230 f2f8eb346b99d276e1128a0fd3eff124 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 1.1E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_34230 f2f8eb346b99d276e1128a0fd3eff124 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 1.1E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_34230 f2f8eb346b99d276e1128a0fd3eff124 213 SMART SM00448 1 121 2.6E-7 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_34230 f2f8eb346b99d276e1128a0fd3eff124 213 SMART SM00421 145 207 5.9E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_34230 f2f8eb346b99d276e1128a0fd3eff124 213 SUPERFAMILY SSF52172 2 133 7.12E-20 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_10300 75005cce871d25aec223a68f32930ed7 355 Pfam PF13377 Periplasmic binding protein-like domain 170 347 1.5E-32 T 14-10-2018 AMIS_10300 75005cce871d25aec223a68f32930ed7 355 SUPERFAMILY SSF53822 116 351 1.78E-41 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_10300 75005cce871d25aec223a68f32930ed7 355 Gene3D G3DSA:3.40.50.2300 58 320 7.1E-53 T 14-10-2018 AMIS_10300 75005cce871d25aec223a68f32930ed7 355 Gene3D G3DSA:1.10.260.40 1 57 2.2E-17 T 14-10-2018 AMIS_10300 75005cce871d25aec223a68f32930ed7 355 Gene3D G3DSA:3.40.50.2300 162 303 7.1E-53 T 14-10-2018 AMIS_10300 75005cce871d25aec223a68f32930ed7 355 SUPERFAMILY SSF47413 2 62 1.31E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_10300 75005cce871d25aec223a68f32930ed7 355 SMART SM00354 3 74 3.6E-15 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_10300 75005cce871d25aec223a68f32930ed7 355 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 48 2.4E-10 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_8970 38ccac49befde67d117bc773f49100c4 199 SUPERFAMILY SSF143456 14 191 1.13E-45 T 14-10-2018 AMIS_8970 38ccac49befde67d117bc773f49100c4 199 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 16 196 24.574 T 14-10-2018 IPR003774 Protein of unknown function UPF0301 AMIS_8970 38ccac49befde67d117bc773f49100c4 199 Pfam PF02622 Uncharacterized ACR, COG1678 27 183 2.2E-37 T 14-10-2018 IPR003774 Protein of unknown function UPF0301 AMIS_8970 38ccac49befde67d117bc773f49100c4 199 Gene3D G3DSA:3.40.1740.10 10 188 3.6E-59 T 14-10-2018 AMIS_14440 52d4d41f9a02b1c048ebee98f4084e74 448 PIRSF PIRSF000332 10 445 1.4E-69 T 14-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 AMIS_14440 52d4d41f9a02b1c048ebee98f4084e74 448 Pfam PF00743 Flavin-binding monooxygenase-like 13 438 7.7E-61 T 14-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 AMIS_14440 52d4d41f9a02b1c048ebee98f4084e74 448 SUPERFAMILY SSF51905 14 261 2.22E-51 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_14440 52d4d41f9a02b1c048ebee98f4084e74 448 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 358 375 2.2E-33 T 14-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 AMIS_14440 52d4d41f9a02b1c048ebee98f4084e74 448 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 198 213 2.2E-33 T 14-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 AMIS_14440 52d4d41f9a02b1c048ebee98f4084e74 448 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 311 338 2.2E-33 T 14-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 AMIS_14440 52d4d41f9a02b1c048ebee98f4084e74 448 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 60 78 2.2E-33 T 14-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 AMIS_14440 52d4d41f9a02b1c048ebee98f4084e74 448 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 171 185 2.2E-33 T 14-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 AMIS_14440 52d4d41f9a02b1c048ebee98f4084e74 448 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 12 28 2.2E-33 T 14-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 AMIS_14440 52d4d41f9a02b1c048ebee98f4084e74 448 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 125 141 2.2E-33 T 14-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 AMIS_14440 52d4d41f9a02b1c048ebee98f4084e74 448 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 84 99 2.2E-33 T 14-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 AMIS_14440 52d4d41f9a02b1c048ebee98f4084e74 448 Gene3D G3DSA:3.50.50.60 12 398 2.5E-85 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_14440 52d4d41f9a02b1c048ebee98f4084e74 448 SUPERFAMILY SSF51905 186 386 4.46E-11 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_37300 316a5650d7aa8411600a1d0672e59ef2 750 Gene3D G3DSA:2.60.40.1180 611 658 7.6E-19 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta AMIS_37300 316a5650d7aa8411600a1d0672e59ef2 750 Gene3D G3DSA:2.60.40.1760 1 239 2.5E-71 T 14-10-2018 AMIS_37300 316a5650d7aa8411600a1d0672e59ef2 750 SUPERFAMILY SSF74650 1 241 1.98E-55 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 AMIS_37300 316a5650d7aa8411600a1d0672e59ef2 750 Gene3D G3DSA:2.60.40.1180 660 745 4.3E-13 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta AMIS_37300 316a5650d7aa8411600a1d0672e59ef2 750 Gene3D G3DSA:3.20.20.80 240 610 5.4E-152 T 14-10-2018 AMIS_37300 316a5650d7aa8411600a1d0672e59ef2 750 SUPERFAMILY SSF51011 580 658 4.6E-21 T 14-10-2018 AMIS_37300 316a5650d7aa8411600a1d0672e59ef2 750 SUPERFAMILY SSF51445 243 579 4.14E-90 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_37300 316a5650d7aa8411600a1d0672e59ef2 750 SUPERFAMILY SSF117125 660 730 1.24E-13 T 14-10-2018 AMIS_37300 316a5650d7aa8411600a1d0672e59ef2 750 Pfam PF13802 Galactose mutarotase-like 153 212 6.6E-16 T 14-10-2018 IPR025887 Glycoside hydrolase family 31, N-terminal domain AMIS_37300 316a5650d7aa8411600a1d0672e59ef2 750 Pfam PF01055 Glycosyl hydrolases family 31 235 663 7.1E-121 T 14-10-2018 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 AMIS_40680 9923f2682dfee1fe55229806bb9c07b8 1685 Pfam PF04616 Glycosyl hydrolases family 43 1036 1315 1.6E-68 T 14-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 AMIS_40680 9923f2682dfee1fe55229806bb9c07b8 1685 Pfam PF04616 Glycosyl hydrolases family 43 462 662 4.8E-9 T 14-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 AMIS_40680 9923f2682dfee1fe55229806bb9c07b8 1685 SUPERFAMILY SSF75005 461 719 3.85E-29 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMIS_40680 9923f2682dfee1fe55229806bb9c07b8 1685 Gene3D G3DSA:2.115.10.20 1034 1323 4.7E-91 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMIS_40680 9923f2682dfee1fe55229806bb9c07b8 1685 SMART SM00560 801 942 1.3E-5 T 14-10-2018 IPR006558 LamG-like jellyroll fold AMIS_40680 9923f2682dfee1fe55229806bb9c07b8 1685 SMART SM00560 78 222 0.0028 T 14-10-2018 IPR006558 LamG-like jellyroll fold AMIS_40680 9923f2682dfee1fe55229806bb9c07b8 1685 SMART SM00089 1411 1502 3.2E-4 T 14-10-2018 IPR022409 PKD/Chitinase domain AMIS_40680 9923f2682dfee1fe55229806bb9c07b8 1685 Gene3D G3DSA:2.60.120.200 738 948 7.8E-36 T 14-10-2018 AMIS_40680 9923f2682dfee1fe55229806bb9c07b8 1685 Gene3D G3DSA:2.60.40.2340 950 1033 1.2E-16 T 14-10-2018 AMIS_40680 9923f2682dfee1fe55229806bb9c07b8 1685 Gene3D G3DSA:2.60.40.10 1421 1503 4.5E-9 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_40680 9923f2682dfee1fe55229806bb9c07b8 1685 SUPERFAMILY SSF49899 735 950 1.5E-35 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily AMIS_40680 9923f2682dfee1fe55229806bb9c07b8 1685 SUPERFAMILY SSF49899 12 228 1.78E-27 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily AMIS_40680 9923f2682dfee1fe55229806bb9c07b8 1685 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 61 223 2.4E-20 T 14-10-2018 AMIS_40680 9923f2682dfee1fe55229806bb9c07b8 1685 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 787 944 2.0E-26 T 14-10-2018 AMIS_40680 9923f2682dfee1fe55229806bb9c07b8 1685 Gene3D G3DSA:2.115.10.20 446 725 4.8E-26 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMIS_40680 9923f2682dfee1fe55229806bb9c07b8 1685 SUPERFAMILY SSF49299 1377 1503 2.75E-9 T 14-10-2018 IPR035986 PKD domain superfamily AMIS_40680 9923f2682dfee1fe55229806bb9c07b8 1685 SUPERFAMILY SSF75005 1037 1329 1.96E-72 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMIS_40680 9923f2682dfee1fe55229806bb9c07b8 1685 Gene3D G3DSA:2.60.120.200 19 229 5.5E-30 T 14-10-2018 AMIS_42300 4a16b7f6842e90e8f5b2c3ebe48d7eb1 220 SUPERFAMILY SSF52172 4 188 1.19E-37 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_42300 4a16b7f6842e90e8f5b2c3ebe48d7eb1 220 SMART SM00421 154 211 5.6E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_42300 4a16b7f6842e90e8f5b2c3ebe48d7eb1 220 Pfam PF00196 Bacterial regulatory proteins, luxR family 156 211 3.2E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_42300 4a16b7f6842e90e8f5b2c3ebe48d7eb1 220 Pfam PF00072 Response regulator receiver domain 8 122 3.2E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_42300 4a16b7f6842e90e8f5b2c3ebe48d7eb1 220 SMART SM00448 6 121 5.2E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_42300 4a16b7f6842e90e8f5b2c3ebe48d7eb1 220 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 187 199 9.8E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_42300 4a16b7f6842e90e8f5b2c3ebe48d7eb1 220 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 171 9.8E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_42300 4a16b7f6842e90e8f5b2c3ebe48d7eb1 220 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 187 9.8E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_42300 4a16b7f6842e90e8f5b2c3ebe48d7eb1 220 Gene3D G3DSA:3.40.50.12740 6 217 1.0E-69 T 14-10-2018 AMIS_53630 88594de367d1ee5d57dc3609e322e24a 593 Gene3D G3DSA:1.10.8.60 423 472 9.4E-63 T 14-10-2018 AMIS_53630 88594de367d1ee5d57dc3609e322e24a 593 Gene3D G3DSA:2.40.50.140 93 152 1.2E-28 T 14-10-2018 AMIS_53630 88594de367d1ee5d57dc3609e322e24a 593 TIGRFAM TIGR03689 pup_AAA: proteasome ATPase 52 570 4.7E-251 T 14-10-2018 IPR022482 Proteasome ATPase GO:0000502|GO:0010498|GO:0016887|GO:0019941 AMIS_53630 88594de367d1ee5d57dc3609e322e24a 593 Hamap MF_02112 Proteasome-associated ATPase [mpa]. 54 571 50.051 T 14-10-2018 IPR022482 Proteasome ATPase GO:0000502|GO:0010498|GO:0016887|GO:0019941 AMIS_53630 88594de367d1ee5d57dc3609e322e24a 593 Gene3D G3DSA:2.40.50.140 153 232 1.5E-20 T 14-10-2018 AMIS_53630 88594de367d1ee5d57dc3609e322e24a 593 Gene3D G3DSA:3.40.50.300 233 422 9.4E-63 T 14-10-2018 AMIS_53630 88594de367d1ee5d57dc3609e322e24a 593 SMART SM00382 270 424 1.4E-20 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_53630 88594de367d1ee5d57dc3609e322e24a 593 ProSitePatterns PS00674 AAA-protein family signature. 392 410 - T 14-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 AMIS_53630 88594de367d1ee5d57dc3609e322e24a 593 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 274 422 1.7E-48 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMIS_53630 88594de367d1ee5d57dc3609e322e24a 593 Pfam PF16450 Proteasomal ATPase OB/ID domain 96 231 2.3E-50 T 14-10-2018 IPR032501 Proteasomal ATPase, OB/ID domain AMIS_53630 88594de367d1ee5d57dc3609e322e24a 593 Gene3D G3DSA:1.20.5.170 42 92 2.5E-15 T 14-10-2018 AMIS_53630 88594de367d1ee5d57dc3609e322e24a 593 SUPERFAMILY SSF52540 232 449 3.36E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_67880 7815e4844961bf5ab54c2beafc54a728 236 Pfam PF03640 Secreted repeat of unknown function 150 192 1.9E-16 T 14-10-2018 IPR005297 Lipoprotein repeat AMIS_67880 7815e4844961bf5ab54c2beafc54a728 236 Pfam PF03640 Secreted repeat of unknown function 90 132 3.7E-13 T 14-10-2018 IPR005297 Lipoprotein repeat AMIS_26080 2784e8111a3e767c84663dab64c5a17b 583 Pfam PF00512 His Kinase A (phospho-acceptor) domain 367 430 4.5E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_26080 2784e8111a3e767c84663dab64c5a17b 583 Pfam PF00672 HAMP domain 319 359 4.1E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_26080 2784e8111a3e767c84663dab64c5a17b 583 SUPERFAMILY SSF55874 419 582 3.27E-48 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_26080 2784e8111a3e767c84663dab64c5a17b 583 Gene3D G3DSA:1.10.287.130 318 425 1.0E-17 T 14-10-2018 AMIS_26080 2784e8111a3e767c84663dab64c5a17b 583 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 474 582 2.0E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_26080 2784e8111a3e767c84663dab64c5a17b 583 PRINTS PR00344 Bacterial sensor protein C-terminal signature 545 563 6.8E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_26080 2784e8111a3e767c84663dab64c5a17b 583 PRINTS PR00344 Bacterial sensor protein C-terminal signature 528 538 6.8E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_26080 2784e8111a3e767c84663dab64c5a17b 583 PRINTS PR00344 Bacterial sensor protein C-terminal signature 510 524 6.8E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_26080 2784e8111a3e767c84663dab64c5a17b 583 PRINTS PR00344 Bacterial sensor protein C-terminal signature 569 582 6.8E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_26080 2784e8111a3e767c84663dab64c5a17b 583 SMART SM00387 473 583 6.7E-39 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_26080 2784e8111a3e767c84663dab64c5a17b 583 SUPERFAMILY SSF47384 349 431 1.06E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_26080 2784e8111a3e767c84663dab64c5a17b 583 SMART SM00388 366 430 1.1E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_26080 2784e8111a3e767c84663dab64c5a17b 583 Gene3D G3DSA:3.30.565.10 429 583 3.0E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_65220 14a12a0dbe53f81d05433352f5b72142 219 SMART SM00421 153 210 4.1E-25 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_65220 14a12a0dbe53f81d05433352f5b72142 219 Gene3D G3DSA:3.40.50.12740 2 216 4.6E-66 T 14-10-2018 AMIS_65220 14a12a0dbe53f81d05433352f5b72142 219 SMART SM00448 2 117 5.8E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_65220 14a12a0dbe53f81d05433352f5b72142 219 ProSitePatterns PS00622 LuxR-type HTH domain signature. 170 197 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_65220 14a12a0dbe53f81d05433352f5b72142 219 SUPERFAMILY SSF52172 1 136 1.15E-33 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_65220 14a12a0dbe53f81d05433352f5b72142 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 186 9.8E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_65220 14a12a0dbe53f81d05433352f5b72142 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 198 9.8E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_65220 14a12a0dbe53f81d05433352f5b72142 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 170 9.8E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_65220 14a12a0dbe53f81d05433352f5b72142 219 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 210 3.5E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_65220 14a12a0dbe53f81d05433352f5b72142 219 SUPERFAMILY SSF46894 137 215 5.78E-22 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_65220 14a12a0dbe53f81d05433352f5b72142 219 Pfam PF00072 Response regulator receiver domain 4 117 4.9E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_80660 6b89632cd19b922b9ebc22212d422aff 292 Gene3D G3DSA:3.30.200.20 15 93 6.5E-21 T 14-10-2018 AMIS_80660 6b89632cd19b922b9ebc22212d422aff 292 Gene3D G3DSA:1.20.1270.240 125 278 5.1E-59 T 14-10-2018 AMIS_80660 6b89632cd19b922b9ebc22212d422aff 292 PIRSF PIRSF006221 11 292 2.1E-55 T 14-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 AMIS_80660 6b89632cd19b922b9ebc22212d422aff 292 SUPERFAMILY SSF56112 24 278 2.92E-35 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMIS_80660 6b89632cd19b922b9ebc22212d422aff 292 Gene3D G3DSA:1.10.510.10 104 254 5.1E-59 T 14-10-2018 AMIS_80660 6b89632cd19b922b9ebc22212d422aff 292 Pfam PF03881 Fructosamine kinase 25 290 2.5E-44 T 14-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 AMIS_53850 5da2f372ba476a278e4c4928f2b514f1 230 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 184 1.1E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_53850 5da2f372ba476a278e4c4928f2b514f1 230 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 200 212 1.1E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_53850 5da2f372ba476a278e4c4928f2b514f1 230 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 200 1.1E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_53850 5da2f372ba476a278e4c4928f2b514f1 230 SMART SM00448 16 129 1.3E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_53850 5da2f372ba476a278e4c4928f2b514f1 230 Pfam PF00072 Response regulator receiver domain 19 130 6.4E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_53850 5da2f372ba476a278e4c4928f2b514f1 230 Pfam PF00196 Bacterial regulatory proteins, luxR family 169 223 7.1E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_53850 5da2f372ba476a278e4c4928f2b514f1 230 SUPERFAMILY SSF52172 15 148 1.07E-33 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_53850 5da2f372ba476a278e4c4928f2b514f1 230 Gene3D G3DSA:3.40.50.12740 16 230 7.7E-62 T 14-10-2018 AMIS_53850 5da2f372ba476a278e4c4928f2b514f1 230 SMART SM00421 167 224 1.7E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_53850 5da2f372ba476a278e4c4928f2b514f1 230 SUPERFAMILY SSF46894 160 229 2.86E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_53850 5da2f372ba476a278e4c4928f2b514f1 230 ProSitePatterns PS00622 LuxR-type HTH domain signature. 184 211 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_41700 2eb37a1f0022b3238df1bead0d0d5fb5 175 Pfam PF13302 Acetyltransferase (GNAT) domain 54 148 4.1E-13 T 14-10-2018 IPR000182 GNAT domain AMIS_41700 2eb37a1f0022b3238df1bead0d0d5fb5 175 Gene3D G3DSA:3.40.630.30 6 159 6.1E-22 T 14-10-2018 AMIS_41700 2eb37a1f0022b3238df1bead0d0d5fb5 175 SUPERFAMILY SSF55729 44 157 1.1E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_29060 5900545ebca44d0df8841e9c34c278ef 225 Gene3D G3DSA:1.10.10.10 130 222 1.6E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_29060 5900545ebca44d0df8841e9c34c278ef 225 Pfam PF08281 Sigma-70, region 4 162 215 3.7E-14 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_29060 5900545ebca44d0df8841e9c34c278ef 225 Pfam PF04542 Sigma-70 region 2 64 131 4.8E-19 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_29060 5900545ebca44d0df8841e9c34c278ef 225 Gene3D G3DSA:1.10.1740.10 46 129 8.7E-34 T 14-10-2018 AMIS_29060 5900545ebca44d0df8841e9c34c278ef 225 SUPERFAMILY SSF88659 156 219 5.67E-15 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_29060 5900545ebca44d0df8841e9c34c278ef 225 SUPERFAMILY SSF88946 47 133 5.49E-24 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_29060 5900545ebca44d0df8841e9c34c278ef 225 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 60 219 3.7E-22 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_39320 5445af69076ca779d78c885e6e295f62 848 Gene3D G3DSA:1.10.10.10 789 847 2.1E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_39320 5445af69076ca779d78c885e6e295f62 848 ProSitePatterns PS00622 LuxR-type HTH domain signature. 806 833 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_39320 5445af69076ca779d78c885e6e295f62 848 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 806 822 9.4E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_39320 5445af69076ca779d78c885e6e295f62 848 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 792 806 9.4E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_39320 5445af69076ca779d78c885e6e295f62 848 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 822 834 9.4E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_39320 5445af69076ca779d78c885e6e295f62 848 Gene3D G3DSA:1.25.40.10 489 788 1.0E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_39320 5445af69076ca779d78c885e6e295f62 848 SUPERFAMILY SSF52540 12 211 2.18E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_39320 5445af69076ca779d78c885e6e295f62 848 Pfam PF00196 Bacterial regulatory proteins, luxR family 791 842 2.7E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_39320 5445af69076ca779d78c885e6e295f62 848 SMART SM00421 789 846 2.1E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_39320 5445af69076ca779d78c885e6e295f62 848 SUPERFAMILY SSF46894 784 843 6.46E-16 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_79210 2b850ad6acfe2bd3721cc6cda26e81ed 393 Pfam PF04213 Htaa 40 198 1.5E-39 T 14-10-2018 IPR007331 Htaa AMIS_79210 2b850ad6acfe2bd3721cc6cda26e81ed 393 Pfam PF13731 WxL domain surface cell wall-binding 199 392 1.3E-9 T 14-10-2018 IPR027994 WxL domain AMIS_42070 7d40435a755a742d3b2663182e19fa8d 731 Gene3D G3DSA:3.30.70.270 231 410 2.6E-50 T 14-10-2018 AMIS_42070 7d40435a755a742d3b2663182e19fa8d 731 SMART SM00052 408 707 8.8E-102 T 14-10-2018 IPR001633 EAL domain AMIS_42070 7d40435a755a742d3b2663182e19fa8d 731 Pfam PF13426 PAS domain 122 225 5.5E-16 T 14-10-2018 IPR000014 PAS domain AMIS_42070 7d40435a755a742d3b2663182e19fa8d 731 SUPERFAMILY SSF141868 650 715 1.7E-16 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_42070 7d40435a755a742d3b2663182e19fa8d 731 SUPERFAMILY SSF55785 100 224 3.87E-29 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_42070 7d40435a755a742d3b2663182e19fa8d 731 Gene3D G3DSA:3.30.450.20 98 224 8.0E-29 T 14-10-2018 AMIS_42070 7d40435a755a742d3b2663182e19fa8d 731 SUPERFAMILY SSF141868 416 594 5.62E-57 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_42070 7d40435a755a742d3b2663182e19fa8d 731 Pfam PF00990 Diguanylate cyclase, GGDEF domain 237 393 2.6E-39 T 14-10-2018 IPR000160 GGDEF domain AMIS_42070 7d40435a755a742d3b2663182e19fa8d 731 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 233 397 2.9E-33 T 14-10-2018 IPR000160 GGDEF domain AMIS_42070 7d40435a755a742d3b2663182e19fa8d 731 SMART SM00091 111 177 3.5E-11 T 14-10-2018 IPR000014 PAS domain AMIS_42070 7d40435a755a742d3b2663182e19fa8d 731 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 107 233 9.7E-27 T 14-10-2018 IPR000014 PAS domain AMIS_42070 7d40435a755a742d3b2663182e19fa8d 731 SMART SM00086 184 226 7.2E-10 T 14-10-2018 IPR001610 PAC motif AMIS_42070 7d40435a755a742d3b2663182e19fa8d 731 Pfam PF00563 EAL domain 653 702 3.5E-11 T 14-10-2018 IPR001633 EAL domain AMIS_42070 7d40435a755a742d3b2663182e19fa8d 731 Pfam PF00563 EAL domain 415 594 3.7E-50 T 14-10-2018 IPR001633 EAL domain AMIS_42070 7d40435a755a742d3b2663182e19fa8d 731 SUPERFAMILY SSF55073 242 399 1.96E-40 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_42070 7d40435a755a742d3b2663182e19fa8d 731 SMART SM00267 226 398 2.5E-54 T 14-10-2018 IPR000160 GGDEF domain AMIS_32260 33f37dc197763f759ad3415c130c7752 490 Gene3D G3DSA:3.30.70.2450 175 259 1.2E-114 T 14-10-2018 AMIS_32260 33f37dc197763f759ad3415c130c7752 490 SUPERFAMILY SSF51905 2 362 1.07E-65 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_32260 33f37dc197763f759ad3415c130c7752 490 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 2.9E-45 T 14-10-2018 AMIS_32260 33f37dc197763f759ad3415c130c7752 490 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 303 321 2.9E-45 T 14-10-2018 AMIS_32260 33f37dc197763f759ad3415c130c7752 490 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 321 337 2.9E-45 T 14-10-2018 AMIS_32260 33f37dc197763f759ad3415c130c7752 490 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 146 161 2.9E-45 T 14-10-2018 AMIS_32260 33f37dc197763f759ad3415c130c7752 490 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 270 285 2.9E-45 T 14-10-2018 AMIS_32260 33f37dc197763f759ad3415c130c7752 490 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 285 301 2.9E-45 T 14-10-2018 AMIS_32260 33f37dc197763f759ad3415c130c7752 490 Pfam PF01494 FAD binding domain 1 335 4.0E-87 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 AMIS_32260 33f37dc197763f759ad3415c130c7752 490 Gene3D G3DSA:3.50.50.60 3 334 1.2E-114 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_32260 33f37dc197763f759ad3415c130c7752 490 Gene3D G3DSA:3.40.30.120 378 488 1.0E-25 T 14-10-2018 AMIS_27930 58f5e9173432a8ebbf006f8e07cf2ef9 222 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 57 207 2.6E-30 T 14-10-2018 IPR000160 GGDEF domain AMIS_27930 58f5e9173432a8ebbf006f8e07cf2ef9 222 SMART SM00267 50 214 3.2E-46 T 14-10-2018 IPR000160 GGDEF domain AMIS_27930 58f5e9173432a8ebbf006f8e07cf2ef9 222 Pfam PF00990 Diguanylate cyclase, GGDEF domain 61 207 1.9E-36 T 14-10-2018 IPR000160 GGDEF domain AMIS_27930 58f5e9173432a8ebbf006f8e07cf2ef9 222 SUPERFAMILY SSF55073 66 207 7.46E-39 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_27930 58f5e9173432a8ebbf006f8e07cf2ef9 222 Gene3D G3DSA:3.30.70.270 55 213 4.5E-45 T 14-10-2018 AMIS_71630 805eba08b919b22cd6e34ee9a34762fc 322 ProSitePatterns PS00194 Thioredoxin family active site. 92 110 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AMIS_71630 805eba08b919b22cd6e34ee9a34762fc 322 Gene3D G3DSA:1.25.40.10 237 322 6.8E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_71630 805eba08b919b22cd6e34ee9a34762fc 322 Pfam PF14561 Tetratricopeptide repeat 237 322 4.7E-21 T 14-10-2018 AMIS_71630 805eba08b919b22cd6e34ee9a34762fc 322 Gene3D G3DSA:3.40.30.10 65 177 8.9E-29 T 14-10-2018 AMIS_71630 805eba08b919b22cd6e34ee9a34762fc 322 Pfam PF00085 Thioredoxin 71 173 1.1E-22 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 AMIS_71630 805eba08b919b22cd6e34ee9a34762fc 322 SUPERFAMILY SSF52833 68 175 7.5E-31 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMIS_64330 becd80d56c850fa5b54986c232105295 218 SUPERFAMILY SSF54001 14 211 2.35E-26 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily AMIS_64330 becd80d56c850fa5b54986c232105295 218 Gene3D G3DSA:3.90.1720.10 3 202 4.2E-8 T 14-10-2018 AMIS_74220 0b4e055b582575c2f78612a995324291 390 Pfam PF02646 RmuC family 80 365 4.5E-93 T 14-10-2018 IPR003798 DNA recombination RmuC AMIS_10330 27638004e8ce9e2dc92bdc09498c2822 567 SMART SM00327 365 560 6.1E-11 T 14-10-2018 IPR002035 von Willebrand factor, type A AMIS_10330 27638004e8ce9e2dc92bdc09498c2822 567 Pfam PF00092 von Willebrand factor type A domain 369 556 1.8E-10 T 14-10-2018 IPR002035 von Willebrand factor, type A AMIS_10330 27638004e8ce9e2dc92bdc09498c2822 567 Gene3D G3DSA:3.40.50.410 367 562 3.0E-27 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMIS_10330 27638004e8ce9e2dc92bdc09498c2822 567 SUPERFAMILY SSF53300 367 558 6.2E-21 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMIS_10330 27638004e8ce9e2dc92bdc09498c2822 567 Pfam PF13531 Bacterial extracellular solute-binding protein 28 295 3.2E-23 T 14-10-2018 AMIS_10330 27638004e8ce9e2dc92bdc09498c2822 567 SUPERFAMILY SSF53850 27 308 8.14E-5 T 14-10-2018 AMIS_31890 7ebde627128943bf9c9d910bb8d2b674 292 SUPERFAMILY SSF50494 30 257 3.35E-34 T 14-10-2018 IPR009003 Peptidase S1, PA clan AMIS_31890 7ebde627128943bf9c9d910bb8d2b674 292 Gene3D G3DSA:2.40.10.10 32 106 1.4E-9 T 14-10-2018 AMIS_31890 7ebde627128943bf9c9d910bb8d2b674 292 Gene3D G3DSA:2.40.10.10 126 259 5.0E-12 T 14-10-2018 AMIS_31890 7ebde627128943bf9c9d910bb8d2b674 292 Pfam PF00089 Trypsin 35 253 2.3E-20 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 AMIS_31890 7ebde627128943bf9c9d910bb8d2b674 292 SMART SM00020 31 253 1.8E-14 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 AMIS_31890 7ebde627128943bf9c9d910bb8d2b674 292 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 77 82 - T 14-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 AMIS_31890 7ebde627128943bf9c9d910bb8d2b674 292 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 67 82 6.0E-8 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AMIS_31890 7ebde627128943bf9c9d910bb8d2b674 292 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 124 138 6.0E-8 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AMIS_31890 7ebde627128943bf9c9d910bb8d2b674 292 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 203 215 6.0E-8 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AMIS_27350 c9134a232c6eca60a84ca040ba6c4949 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 1.1E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_27350 c9134a232c6eca60a84ca040ba6c4949 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 1.1E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_27350 c9134a232c6eca60a84ca040ba6c4949 192 Gene3D G3DSA:1.10.357.10 13 190 5.8E-25 T 14-10-2018 AMIS_27350 c9134a232c6eca60a84ca040ba6c4949 192 SUPERFAMILY SSF46689 6 82 3.39E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_27350 c9134a232c6eca60a84ca040ba6c4949 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 65 1.8E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_470 8a05ec27ddb250008e431d6c1aa889fb 600 Gene3D G3DSA:3.30.10.20 439 501 3.2E-9 T 14-10-2018 AMIS_470 8a05ec27ddb250008e431d6c1aa889fb 600 SMART SM00220 12 276 3.1E-66 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMIS_470 8a05ec27ddb250008e431d6c1aa889fb 600 Gene3D G3DSA:3.30.10.20 502 565 2.8E-13 T 14-10-2018 AMIS_470 8a05ec27ddb250008e431d6c1aa889fb 600 Gene3D G3DSA:3.30.10.20 369 431 2.9E-11 T 14-10-2018 AMIS_470 8a05ec27ddb250008e431d6c1aa889fb 600 Pfam PF00069 Protein kinase domain 12 269 5.9E-50 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMIS_470 8a05ec27ddb250008e431d6c1aa889fb 600 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 18 41 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 AMIS_470 8a05ec27ddb250008e431d6c1aa889fb 600 SUPERFAMILY SSF56112 9 289 4.72E-77 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMIS_470 8a05ec27ddb250008e431d6c1aa889fb 600 SMART SM00740 435 500 3.1E-4 T 14-10-2018 IPR005543 PASTA domain AMIS_470 8a05ec27ddb250008e431d6c1aa889fb 600 SMART SM00740 367 430 1.8E-5 T 14-10-2018 IPR005543 PASTA domain AMIS_470 8a05ec27ddb250008e431d6c1aa889fb 600 SMART SM00740 501 567 3.4E-9 T 14-10-2018 IPR005543 PASTA domain AMIS_470 8a05ec27ddb250008e431d6c1aa889fb 600 Pfam PF03793 PASTA domain 371 424 1.4E-10 T 14-10-2018 IPR005543 PASTA domain AMIS_470 8a05ec27ddb250008e431d6c1aa889fb 600 Pfam PF03793 PASTA domain 506 565 8.9E-12 T 14-10-2018 IPR005543 PASTA domain AMIS_470 8a05ec27ddb250008e431d6c1aa889fb 600 Gene3D G3DSA:1.10.510.10 98 285 3.1E-56 T 14-10-2018 AMIS_470 8a05ec27ddb250008e431d6c1aa889fb 600 Gene3D G3DSA:3.30.200.20 1 96 1.5E-33 T 14-10-2018 AMIS_470 8a05ec27ddb250008e431d6c1aa889fb 600 SUPERFAMILY SSF54184 504 564 9.94E-5 T 14-10-2018 AMIS_470 8a05ec27ddb250008e431d6c1aa889fb 600 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 136 148 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 AMIS_61110 9f7ea7cf7e477cb70d98261f504863da 91 PRINTS PR00107 Phosphocarrier protein signature 39 54 2.2E-13 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like AMIS_61110 9f7ea7cf7e477cb70d98261f504863da 91 PRINTS PR00107 Phosphocarrier protein signature 54 71 2.2E-13 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like AMIS_61110 9f7ea7cf7e477cb70d98261f504863da 91 PRINTS PR00107 Phosphocarrier protein signature 13 29 2.2E-13 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like AMIS_61110 9f7ea7cf7e477cb70d98261f504863da 91 Pfam PF00381 PTS HPr component phosphorylation site 3 83 1.9E-25 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like AMIS_61110 9f7ea7cf7e477cb70d98261f504863da 91 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 9.2E-24 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like AMIS_61110 9f7ea7cf7e477cb70d98261f504863da 91 Gene3D G3DSA:3.30.1340.10 1 87 1.5E-24 T 14-10-2018 IPR035895 HPr-like superfamily AMIS_61110 9f7ea7cf7e477cb70d98261f504863da 91 SUPERFAMILY SSF55594 1 87 1.83E-21 T 14-10-2018 IPR035895 HPr-like superfamily AMIS_60230 6216909b0bb64f0823d8ed818a9b113b 2143 SUPERFAMILY SSF52540 76 272 7.42E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_60230 6216909b0bb64f0823d8ed818a9b113b 2143 Pfam PF00270 DEAD/DEAH box helicase 94 252 1.4E-15 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMIS_60230 6216909b0bb64f0823d8ed818a9b113b 2143 SMART SM00490 977 1062 8.4E-16 T 14-10-2018 IPR001650 Helicase, C-terminal AMIS_60230 6216909b0bb64f0823d8ed818a9b113b 2143 Pfam PF09369 Domain of unknown function (DUF1998) 1549 1636 4.7E-9 T 14-10-2018 IPR018973 DEAD/DEAH-box helicase, putative AMIS_60230 6216909b0bb64f0823d8ed818a9b113b 2143 Pfam PF00271 Helicase conserved C-terminal domain 993 1061 3.8E-10 T 14-10-2018 IPR001650 Helicase, C-terminal AMIS_60230 6216909b0bb64f0823d8ed818a9b113b 2143 SUPERFAMILY SSF52540 97 1085 7.36E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_60230 6216909b0bb64f0823d8ed818a9b113b 2143 Gene3D G3DSA:3.40.960.10 1722 1812 2.8E-5 T 14-10-2018 AMIS_60230 6216909b0bb64f0823d8ed818a9b113b 2143 Gene3D G3DSA:3.40.50.300 66 280 1.7E-32 T 14-10-2018 AMIS_60230 6216909b0bb64f0823d8ed818a9b113b 2143 Gene3D G3DSA:3.40.50.300 954 1087 2.2E-20 T 14-10-2018 AMIS_60230 6216909b0bb64f0823d8ed818a9b113b 2143 SMART SM00487 72 294 4.1E-10 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMIS_60000 f0ff66a563677099494bcd07b9e1380d 306 Gene3D G3DSA:3.40.50.2300 139 263 3.5E-54 T 14-10-2018 AMIS_60000 f0ff66a563677099494bcd07b9e1380d 306 Gene3D G3DSA:3.40.50.2300 57 285 3.5E-54 T 14-10-2018 AMIS_60000 f0ff66a563677099494bcd07b9e1380d 306 Pfam PF13377 Periplasmic binding protein-like domain 148 302 1.3E-28 T 14-10-2018 AMIS_60000 f0ff66a563677099494bcd07b9e1380d 306 SUPERFAMILY SSF53822 49 287 1.96E-49 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_75820 f0cd58629b814a8d8a34aa55109d94cd 438 Gene3D G3DSA:3.40.50.720 162 312 1.9E-41 T 14-10-2018 AMIS_75820 f0cd58629b814a8d8a34aa55109d94cd 438 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 174 307 2.5E-31 T 14-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase AMIS_75820 f0cd58629b814a8d8a34aa55109d94cd 438 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 418 27.007 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AMIS_75820 f0cd58629b814a8d8a34aa55109d94cd 438 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 156 1.3E-43 T 14-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AMIS_75820 f0cd58629b814a8d8a34aa55109d94cd 438 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 322 420 1.0E-23 T 14-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AMIS_75820 f0cd58629b814a8d8a34aa55109d94cd 438 SUPERFAMILY SSF69075 320 421 9.94E-19 T 14-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AMIS_75820 f0cd58629b814a8d8a34aa55109d94cd 438 SUPERFAMILY SSF69742 2 158 6.02E-43 T 14-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AMIS_75820 f0cd58629b814a8d8a34aa55109d94cd 438 Gene3D G3DSA:3.30.460.30 1 158 2.6E-53 T 14-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AMIS_75820 f0cd58629b814a8d8a34aa55109d94cd 438 PIRSF PIRSF000445 1 433 9.8E-141 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AMIS_75820 f0cd58629b814a8d8a34aa55109d94cd 438 SUPERFAMILY SSF51735 164 306 7.1E-26 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_75820 f0cd58629b814a8d8a34aa55109d94cd 438 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 421 9.3E-129 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AMIS_15940 5a7005f02cdb15d1009fb082149b5140 140 Gene3D G3DSA:1.10.10.250 73 140 7.3E-26 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily AMIS_15940 5a7005f02cdb15d1009fb082149b5140 140 Gene3D G3DSA:3.30.1550.10 4 72 1.4E-12 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily AMIS_15940 5a7005f02cdb15d1009fb082149b5140 140 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 42 73 9.0E-5 T 14-10-2018 AMIS_15940 5a7005f02cdb15d1009fb082149b5140 140 Pfam PF00298 Ribosomal protein L11, RNA binding domain 71 139 1.1E-22 T 14-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 AMIS_15940 5a7005f02cdb15d1009fb082149b5140 140 SUPERFAMILY SSF54747 5 84 2.75E-12 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily AMIS_15940 5a7005f02cdb15d1009fb082149b5140 140 SMART SM00649 10 140 5.0E-46 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 AMIS_15940 5a7005f02cdb15d1009fb082149b5140 140 SUPERFAMILY SSF46906 68 139 5.36E-23 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily AMIS_15940 5a7005f02cdb15d1009fb082149b5140 140 Pfam PF03946 Ribosomal protein L11, N-terminal domain 10 65 1.2E-11 T 14-10-2018 IPR020784 Ribosomal protein L11, N-terminal AMIS_15940 5a7005f02cdb15d1009fb082149b5140 140 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 6 140 22.033 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 AMIS_42160 8392edc1203cbe8bce7a594790442417 370 Pfam PF03595 Voltage-dependent anion channel 27 358 1.7E-65 T 14-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 AMIS_42160 8392edc1203cbe8bce7a594790442417 370 Gene3D G3DSA:1.50.10.150 20 364 3.5E-17 T 14-10-2018 IPR038665 Voltage-dependent anion channel superfamily AMIS_69090 fa5d5bfb00ab005ae998698092841f2e 574 TIGRFAM TIGR00277 HDIG: HDIG domain 386 463 1.9E-21 T 14-10-2018 IPR006675 HDIG domain AMIS_69090 fa5d5bfb00ab005ae998698092841f2e 574 SUPERFAMILY SSF109604 371 502 3.81E-27 T 14-10-2018 AMIS_69090 fa5d5bfb00ab005ae998698092841f2e 574 Pfam PF12072 Domain of unknown function (DUF3552) 81 258 2.8E-24 T 14-10-2018 IPR022711 Ribonuclease Y, N-terminal AMIS_69090 fa5d5bfb00ab005ae998698092841f2e 574 Hamap MF_00335 Ribonuclease Y [rny]. 6 574 24.201 T 14-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 AMIS_69090 fa5d5bfb00ab005ae998698092841f2e 574 SMART SM00322 262 350 0.0012 T 14-10-2018 IPR004087 K Homology domain GO:0003676 AMIS_69090 fa5d5bfb00ab005ae998698092841f2e 574 TIGRFAM TIGR03319 RNase_Y: ribonuclease Y 79 574 1.7E-191 T 14-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 AMIS_69090 fa5d5bfb00ab005ae998698092841f2e 574 SUPERFAMILY SSF54791 262 353 4.03E-13 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 AMIS_69090 fa5d5bfb00ab005ae998698092841f2e 574 Gene3D G3DSA:3.30.1370.10 266 350 7.8E-6 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 AMIS_69090 fa5d5bfb00ab005ae998698092841f2e 574 Pfam PF01966 HD domain 391 481 3.2E-17 T 14-10-2018 IPR006674 HD domain AMIS_69090 fa5d5bfb00ab005ae998698092841f2e 574 SMART SM00471 386 492 2.6E-9 T 14-10-2018 IPR003607 HD/PDEase domain AMIS_69090 fa5d5bfb00ab005ae998698092841f2e 574 Pfam PF00013 KH domain 268 305 4.1E-6 T 14-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 AMIS_69090 fa5d5bfb00ab005ae998698092841f2e 574 Gene3D G3DSA:1.10.3210.10 359 524 8.3E-15 T 14-10-2018 AMIS_28380 c24482a7ab25e3da816694454cf396f7 217 Gene3D G3DSA:1.10.357.10 69 217 1.0E-5 T 14-10-2018 AMIS_28380 c24482a7ab25e3da816694454cf396f7 217 SUPERFAMILY SSF46689 15 77 1.25E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_28380 c24482a7ab25e3da816694454cf396f7 217 Gene3D G3DSA:1.10.10.60 3 68 2.5E-13 T 14-10-2018 AMIS_28380 c24482a7ab25e3da816694454cf396f7 217 Pfam PF00440 Bacterial regulatory proteins, tetR family 27 72 3.9E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_28380 c24482a7ab25e3da816694454cf396f7 217 SUPERFAMILY SSF48498 101 211 8.4E-6 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_55150 67ba500fb090c468974a1fb3368fa43f 431 Gene3D G3DSA:3.40.190.10 43 376 2.2E-105 T 14-10-2018 AMIS_55150 67ba500fb090c468974a1fb3368fa43f 431 Gene3D G3DSA:3.40.190.10 153 422 2.2E-105 T 14-10-2018 AMIS_55150 67ba500fb090c468974a1fb3368fa43f 431 Pfam PF01547 Bacterial extracellular solute-binding protein 56 336 6.7E-17 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein AMIS_55150 67ba500fb090c468974a1fb3368fa43f 431 SUPERFAMILY SSF53850 39 426 2.17E-53 T 14-10-2018 AMIS_55230 7062f515f723d94813b38e15dc55046a 275 Gene3D G3DSA:3.40.190.10 37 271 4.9E-99 T 14-10-2018 AMIS_55230 7062f515f723d94813b38e15dc55046a 275 Gene3D G3DSA:3.40.190.10 120 224 4.9E-99 T 14-10-2018 AMIS_55230 7062f515f723d94813b38e15dc55046a 275 SUPERFAMILY SSF53850 37 275 5.65E-77 T 14-10-2018 AMIS_55230 7062f515f723d94813b38e15dc55046a 275 Pfam PF03180 NLPA lipoprotein 38 274 7.2E-91 T 14-10-2018 IPR004872 Lipoprotein NlpA family AMIS_55230 7062f515f723d94813b38e15dc55046a 275 PIRSF PIRSF002854 2 275 1.7E-105 T 14-10-2018 IPR004872 Lipoprotein NlpA family AMIS_68050 395ed277318a25ea2bec6550df1f5dd9 1009 SMART SM00052 748 996 1.5E-108 T 14-10-2018 IPR001633 EAL domain AMIS_68050 395ed277318a25ea2bec6550df1f5dd9 1009 Pfam PF00563 EAL domain 754 991 1.2E-70 T 14-10-2018 IPR001633 EAL domain AMIS_68050 395ed277318a25ea2bec6550df1f5dd9 1009 Pfam PF08448 PAS fold 464 569 5.0E-7 T 14-10-2018 IPR013656 PAS fold-4 AMIS_68050 395ed277318a25ea2bec6550df1f5dd9 1009 SUPERFAMILY SSF141868 754 1004 7.72E-87 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_68050 395ed277318a25ea2bec6550df1f5dd9 1009 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 574 735 9.3E-40 T 14-10-2018 IPR000160 GGDEF domain AMIS_68050 395ed277318a25ea2bec6550df1f5dd9 1009 SUPERFAMILY SSF55073 583 739 9.42E-47 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_68050 395ed277318a25ea2bec6550df1f5dd9 1009 Gene3D G3DSA:3.30.70.270 576 751 5.8E-56 T 14-10-2018 AMIS_68050 395ed277318a25ea2bec6550df1f5dd9 1009 SMART SM00267 567 738 2.0E-65 T 14-10-2018 IPR000160 GGDEF domain AMIS_68050 395ed277318a25ea2bec6550df1f5dd9 1009 SMART SM00091 456 519 5.1E-6 T 14-10-2018 IPR000014 PAS domain AMIS_68050 395ed277318a25ea2bec6550df1f5dd9 1009 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 452 574 7.8E-12 T 14-10-2018 IPR000014 PAS domain AMIS_68050 395ed277318a25ea2bec6550df1f5dd9 1009 Pfam PF00990 Diguanylate cyclase, GGDEF domain 578 734 3.4E-47 T 14-10-2018 IPR000160 GGDEF domain AMIS_68050 395ed277318a25ea2bec6550df1f5dd9 1009 SUPERFAMILY SSF55785 448 565 1.87E-12 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_68050 395ed277318a25ea2bec6550df1f5dd9 1009 Gene3D G3DSA:3.30.450.20 443 575 2.5E-15 T 14-10-2018 AMIS_68050 395ed277318a25ea2bec6550df1f5dd9 1009 Gene3D G3DSA:3.20.20.450 752 1008 9.7E-96 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_77160 c8ecb7db44cab24c52f903d879084dbc 333 Gene3D G3DSA:3.40.50.300 1 264 3.9E-57 T 14-10-2018 AMIS_77160 c8ecb7db44cab24c52f903d879084dbc 333 SMART SM00382 33 212 2.4E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_77160 c8ecb7db44cab24c52f903d879084dbc 333 Pfam PF00005 ABC transporter 24 164 1.6E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_77160 c8ecb7db44cab24c52f903d879084dbc 333 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_77160 c8ecb7db44cab24c52f903d879084dbc 333 SUPERFAMILY SSF52540 3 229 7.14E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_12030 ae4618bb0d1d044d125619dda2e36868 99 Pfam PF01022 Bacterial regulatory protein, arsR family 22 65 2.3E-13 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_12030 ae4618bb0d1d044d125619dda2e36868 99 SUPERFAMILY SSF46785 5 90 5.15E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_12030 ae4618bb0d1d044d125619dda2e36868 99 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 16 31 2.1E-13 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_12030 ae4618bb0d1d044d125619dda2e36868 99 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 63 78 2.1E-13 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_12030 ae4618bb0d1d044d125619dda2e36868 99 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 35 46 2.1E-13 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_12030 ae4618bb0d1d044d125619dda2e36868 99 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 48 63 2.1E-13 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_12030 ae4618bb0d1d044d125619dda2e36868 99 SMART SM00418 14 92 3.6E-26 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_12030 ae4618bb0d1d044d125619dda2e36868 99 Gene3D G3DSA:1.10.10.10 2 99 6.1E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_25840 dfb9d8f48997ccb5f272e578ae3e7d49 339 Pfam PF04892 VanZ like family 48 172 3.7E-19 T 14-10-2018 IPR006976 VanZ-like AMIS_45590 fa7931effb2cf620e0aad607284f105d 247 Pfam PF00005 ABC transporter 23 163 2.6E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_45590 fa7931effb2cf620e0aad607284f105d 247 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_45590 fa7931effb2cf620e0aad607284f105d 247 SMART SM00382 32 212 1.3E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_45590 fa7931effb2cf620e0aad607284f105d 247 Gene3D G3DSA:3.40.50.300 3 235 2.8E-60 T 14-10-2018 AMIS_45590 fa7931effb2cf620e0aad607284f105d 247 SUPERFAMILY SSF52540 8 223 5.43E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_18860 dfaa31b35e97ed01ea9aa9d8dd365fa2 1651 SUPERFAMILY SSF49785 923 999 2.76E-5 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_18860 dfaa31b35e97ed01ea9aa9d8dd365fa2 1651 Pfam PF08241 Methyltransferase domain 1435 1524 2.6E-16 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 AMIS_18860 dfaa31b35e97ed01ea9aa9d8dd365fa2 1651 SUPERFAMILY SSF53335 1420 1613 2.41E-26 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_18860 dfaa31b35e97ed01ea9aa9d8dd365fa2 1651 Gene3D G3DSA:2.60.120.260 702 834 1.3E-6 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_18860 dfaa31b35e97ed01ea9aa9d8dd365fa2 1651 Gene3D G3DSA:2.60.120.260 933 1033 2.4E-9 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_18860 dfaa31b35e97ed01ea9aa9d8dd365fa2 1651 Gene3D G3DSA:3.40.50.150 1414 1599 2.1E-25 T 14-10-2018 AMIS_18860 dfaa31b35e97ed01ea9aa9d8dd365fa2 1651 Pfam PF00754 F5/8 type C domain 719 818 4.3E-7 T 14-10-2018 IPR000421 Coagulation factor 5/8 C-terminal domain AMIS_18860 dfaa31b35e97ed01ea9aa9d8dd365fa2 1651 SUPERFAMILY SSF49785 715 836 7.09E-7 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_18860 dfaa31b35e97ed01ea9aa9d8dd365fa2 1651 Pfam PF11847 Domain of unknown function (DUF3367) 27 679 2.8E-247 T 14-10-2018 IPR021798 Alpha-(1->3)-arabinofuranosyltransferase GO:0016740 KEGG: 00571+2.4.2.47|KEGG: 00572+2.4.2.47|MetaCyc: PWY-6397 AMIS_10000 13b0b9f80f054af22dbfff56a3bfb59a 552 Pfam PF13416 Bacterial extracellular solute-binding protein 112 396 4.1E-19 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein AMIS_10000 13b0b9f80f054af22dbfff56a3bfb59a 552 Gene3D G3DSA:3.40.190.10 121 217 7.7E-6 T 14-10-2018 AMIS_10000 13b0b9f80f054af22dbfff56a3bfb59a 552 Gene3D G3DSA:3.40.190.10 221 453 5.5E-31 T 14-10-2018 AMIS_10000 13b0b9f80f054af22dbfff56a3bfb59a 552 SUPERFAMILY SSF53850 29 547 1.36E-62 T 14-10-2018 AMIS_80970 d947f82321b381d512ee5bcec1e3359f 140 Pfam PF17249 Family of unknown function (DUF5318) 1 124 3.7E-66 T 14-10-2018 IPR035169 Protein of unknown function DUF5318 AMIS_67090 ba216a9149578a0e563b526cb66bd3f8 1072 Gene3D G3DSA:3.40.50.300 471 721 2.6E-30 T 14-10-2018 AMIS_67090 ba216a9149578a0e563b526cb66bd3f8 1072 Gene3D G3DSA:3.90.1570.50 118 273 3.5E-13 T 14-10-2018 AMIS_67090 ba216a9149578a0e563b526cb66bd3f8 1072 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 12 218 4.4E-26 T 14-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 AMIS_67090 ba216a9149578a0e563b526cb66bd3f8 1072 SMART SM00487 272 483 2.4E-14 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMIS_67090 ba216a9149578a0e563b526cb66bd3f8 1072 SUPERFAMILY SSF52540 415 692 8.69E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_67090 ba216a9149578a0e563b526cb66bd3f8 1072 Pfam PF11867 Domain of unknown function (DUF3387) 713 1065 1.1E-97 T 14-10-2018 IPR021810 Protein of unknown function DUF3387 AMIS_67090 ba216a9149578a0e563b526cb66bd3f8 1072 Gene3D G3DSA:3.40.50.300 275 470 1.1E-49 T 14-10-2018 AMIS_67090 ba216a9149578a0e563b526cb66bd3f8 1072 SUPERFAMILY SSF52540 252 483 1.47E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_67090 ba216a9149578a0e563b526cb66bd3f8 1072 Pfam PF04851 Type III restriction enzyme, res subunit 278 452 3.8E-17 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AMIS_67090 ba216a9149578a0e563b526cb66bd3f8 1072 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 18 712 6.8E-135 T 14-10-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 AMIS_8560 fafcb0192409a015b5ac072d5c559b0e 436 Pfam PF04055 Radical SAM superfamily 81 259 9.1E-11 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMIS_8560 fafcb0192409a015b5ac072d5c559b0e 436 TIGRFAM TIGR03550 F420_cofG: 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofG subunit 74 399 6.4E-143 T 14-10-2018 IPR019939 CofG family GO:0009108|GO:0016765|GO:0051539 KEGG: 00680+2.5.1.77 AMIS_8560 fafcb0192409a015b5ac072d5c559b0e 436 Hamap MF_01611 FO synthase subunit 1 [cofG]. 73 401 49.006 T 14-10-2018 IPR019939 CofG family GO:0009108|GO:0016765|GO:0051539 KEGG: 00680+2.5.1.77 AMIS_8560 fafcb0192409a015b5ac072d5c559b0e 436 SUPERFAMILY SSF102114 65 375 1.08E-38 T 14-10-2018 AMIS_8560 fafcb0192409a015b5ac072d5c559b0e 436 Gene3D G3DSA:3.20.20.70 4 331 1.4E-51 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_8560 fafcb0192409a015b5ac072d5c559b0e 436 SMART SM00729 77 310 2.5E-5 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AMIS_11630 82e3bcb8848f0eb01aab5fc32db6f1fd 88 SUPERFAMILY SSF46992 3 86 9.94E-28 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_11630 82e3bcb8848f0eb01aab5fc32db6f1fd 88 Gene3D G3DSA:1.20.58.110 1 87 2.8E-28 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_11630 82e3bcb8848f0eb01aab5fc32db6f1fd 88 TIGRFAM TIGR00029 S20: ribosomal protein bS20 2 86 1.7E-24 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_11630 82e3bcb8848f0eb01aab5fc32db6f1fd 88 Pfam PF01649 Ribosomal protein S20 2 83 4.6E-27 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_11630 82e3bcb8848f0eb01aab5fc32db6f1fd 88 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 16.861 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_11630 82e3bcb8848f0eb01aab5fc32db6f1fd 88 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 12 71 9.0E-20 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_46890 84f74f85a29628d83b22195cf735fc4c 477 Pfam PF14200 Ricin-type beta-trefoil lectin domain-like 378 464 1.8E-20 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_46890 84f74f85a29628d83b22195cf735fc4c 477 SMART SM00458 343 477 6.7E-16 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_46890 84f74f85a29628d83b22195cf735fc4c 477 Gene3D G3DSA:2.115.10.20 27 336 4.3E-81 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMIS_46890 84f74f85a29628d83b22195cf735fc4c 477 Gene3D G3DSA:2.80.10.50 386 426 7.4E-11 T 14-10-2018 AMIS_46890 84f74f85a29628d83b22195cf735fc4c 477 SUPERFAMILY SSF75005 33 339 6.0E-54 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMIS_46890 84f74f85a29628d83b22195cf735fc4c 477 SUPERFAMILY SSF50370 345 476 1.86E-35 T 14-10-2018 IPR035992 Ricin B-like lectins AMIS_46890 84f74f85a29628d83b22195cf735fc4c 477 Pfam PF04616 Glycosyl hydrolases family 43 33 330 2.7E-53 T 14-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 AMIS_46890 84f74f85a29628d83b22195cf735fc4c 477 Gene3D G3DSA:2.80.10.50 337 385 5.7E-8 T 14-10-2018 AMIS_46890 84f74f85a29628d83b22195cf735fc4c 477 Gene3D G3DSA:2.80.10.50 427 477 1.7E-13 T 14-10-2018 AMIS_4740 0747c031e74d92ae25b44d157f41a9c0 295 Gene3D G3DSA:3.40.50.300 1 228 7.4E-53 T 14-10-2018 AMIS_4740 0747c031e74d92ae25b44d157f41a9c0 295 Pfam PF00005 ABC transporter 18 157 5.3E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_4740 0747c031e74d92ae25b44d157f41a9c0 295 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_4740 0747c031e74d92ae25b44d157f41a9c0 295 SMART SM00382 27 214 4.2E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_4740 0747c031e74d92ae25b44d157f41a9c0 295 SUPERFAMILY SSF52540 2 218 4.62E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_16810 0124f4b6b61e90d1cb1cc81fdab8cf4d 149 Gene3D G3DSA:2.40.50.140 84 144 1.6E-19 T 14-10-2018 AMIS_16810 0124f4b6b61e90d1cb1cc81fdab8cf4d 149 Pfam PF01957 NfeD-like C-terminal, partner-binding 5 143 4.0E-21 T 14-10-2018 IPR002810 NfeD-like, C-terminal domain AMIS_16810 0124f4b6b61e90d1cb1cc81fdab8cf4d 149 SUPERFAMILY SSF141322 83 141 1.02E-9 T 14-10-2018 AMIS_70300 99c15e96ee4a8c12b24ee142b18a1f8b 163 SUPERFAMILY SSF88946 3 92 5.1E-17 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_70300 99c15e96ee4a8c12b24ee142b18a1f8b 163 Gene3D G3DSA:1.10.10.10 91 156 2.7E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_70300 99c15e96ee4a8c12b24ee142b18a1f8b 163 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 3 149 5.1E-17 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_70300 99c15e96ee4a8c12b24ee142b18a1f8b 163 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 28 59 - T 14-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_70300 99c15e96ee4a8c12b24ee142b18a1f8b 163 Pfam PF08281 Sigma-70, region 4 97 145 2.2E-13 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_70300 99c15e96ee4a8c12b24ee142b18a1f8b 163 SUPERFAMILY SSF88659 94 151 9.16E-14 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_70300 99c15e96ee4a8c12b24ee142b18a1f8b 163 Gene3D G3DSA:1.10.1740.10 1 74 1.7E-12 T 14-10-2018 AMIS_70300 99c15e96ee4a8c12b24ee142b18a1f8b 163 TIGRFAM TIGR02983 SigE-fam_strep: RNA polymerase sigma-70 factor, sigma-E family 2 152 6.6E-46 T 14-10-2018 IPR014325 RNA polymerase sigma-E factor, actinobacteria GO:0016987 AMIS_70300 99c15e96ee4a8c12b24ee142b18a1f8b 163 Pfam PF04542 Sigma-70 region 2 6 70 2.3E-13 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_60920 0ef85bab28bdd44069050c63eabd2c48 532 PRINTS PR01806 Virulence factor MviN signature 44 63 1.7E-12 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AMIS_60920 0ef85bab28bdd44069050c63eabd2c48 532 PRINTS PR01806 Virulence factor MviN signature 142 166 1.7E-12 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AMIS_60920 0ef85bab28bdd44069050c63eabd2c48 532 PRINTS PR01806 Virulence factor MviN signature 364 383 1.7E-12 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AMIS_60920 0ef85bab28bdd44069050c63eabd2c48 532 PRINTS PR01806 Virulence factor MviN signature 419 436 1.7E-12 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AMIS_60920 0ef85bab28bdd44069050c63eabd2c48 532 PRINTS PR01806 Virulence factor MviN signature 63 79 1.7E-12 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AMIS_60920 0ef85bab28bdd44069050c63eabd2c48 532 PRINTS PR01806 Virulence factor MviN signature 166 187 1.7E-12 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AMIS_60920 0ef85bab28bdd44069050c63eabd2c48 532 Pfam PF03023 MviN-like protein 43 468 3.3E-53 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AMIS_13290 0392d646262fe8c50ab21c46f74d8c34 369 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 169 360 2.5E-54 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AMIS_13290 0392d646262fe8c50ab21c46f74d8c34 369 Gene3D G3DSA:3.30.420.10 3 139 3.6E-40 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMIS_13290 0392d646262fe8c50ab21c46f74d8c34 369 Pfam PF13456 Reverse transcriptase-like 9 131 5.8E-25 T 14-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 AMIS_13290 0392d646262fe8c50ab21c46f74d8c34 369 PIRSF PIRSF036922 1 369 8.7E-137 T 14-10-2018 IPR014636 RNase H, phosphoglycerate mutase domain-containing AMIS_13290 0392d646262fe8c50ab21c46f74d8c34 369 SUPERFAMILY SSF53254 167 368 6.15E-51 T 14-10-2018 IPR029033 Histidine phosphatase superfamily AMIS_13290 0392d646262fe8c50ab21c46f74d8c34 369 SUPERFAMILY SSF53098 5 129 5.31E-29 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily AMIS_13290 0392d646262fe8c50ab21c46f74d8c34 369 SMART SM00855 168 324 6.2E-18 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AMIS_13290 0392d646262fe8c50ab21c46f74d8c34 369 Gene3D G3DSA:3.40.50.1240 166 369 1.5E-54 T 14-10-2018 IPR029033 Histidine phosphatase superfamily AMIS_38110 54cf72ac1fe7307353c4f476fc4b8a6c 248 Pfam PF00005 ABC transporter 14 172 3.7E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_38110 54cf72ac1fe7307353c4f476fc4b8a6c 248 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_38110 54cf72ac1fe7307353c4f476fc4b8a6c 248 SMART SM00382 23 220 3.2E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_38110 54cf72ac1fe7307353c4f476fc4b8a6c 248 Gene3D G3DSA:3.40.50.300 1 248 1.0E-75 T 14-10-2018 AMIS_38110 54cf72ac1fe7307353c4f476fc4b8a6c 248 SUPERFAMILY SSF52540 2 242 8.3E-76 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_38110 54cf72ac1fe7307353c4f476fc4b8a6c 248 PIRSF PIRSF039085 1 248 2.7E-110 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AMIS_40150 1d6dacbebaa6781599c50b78b94fa12c 906 Pfam PF12770 CHAT domain 107 354 4.1E-26 T 14-10-2018 IPR024983 CHAT domain AMIS_40150 1d6dacbebaa6781599c50b78b94fa12c 906 SUPERFAMILY SSF69322 616 893 6.41E-20 T 14-10-2018 AMIS_40150 1d6dacbebaa6781599c50b78b94fa12c 906 Gene3D G3DSA:2.130.10.10 608 895 9.2E-18 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_46130 5c5f23e16b9af65dfd92900e97d46f56 271 PIRSF PIRSF000097 1 268 3.3E-75 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMIS_46130 5c5f23e16b9af65dfd92900e97d46f56 271 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 121 138 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AMIS_46130 5c5f23e16b9af65dfd92900e97d46f56 271 SUPERFAMILY SSF51430 3 262 8.51E-90 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMIS_46130 5c5f23e16b9af65dfd92900e97d46f56 271 Pfam PF00248 Aldo/keto reductase family 20 257 1.7E-44 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain AMIS_46130 5c5f23e16b9af65dfd92900e97d46f56 271 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 37 54 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AMIS_46130 5c5f23e16b9af65dfd92900e97d46f56 271 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 225 240 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AMIS_46130 5c5f23e16b9af65dfd92900e97d46f56 271 Gene3D G3DSA:3.20.20.100 1 271 5.8E-105 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMIS_46130 5c5f23e16b9af65dfd92900e97d46f56 271 PRINTS PR00069 Aldo-keto reductase signature 33 57 1.0E-38 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMIS_46130 5c5f23e16b9af65dfd92900e97d46f56 271 PRINTS PR00069 Aldo-keto reductase signature 192 216 1.0E-38 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMIS_46130 5c5f23e16b9af65dfd92900e97d46f56 271 PRINTS PR00069 Aldo-keto reductase signature 155 184 1.0E-38 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMIS_46130 5c5f23e16b9af65dfd92900e97d46f56 271 PRINTS PR00069 Aldo-keto reductase signature 121 138 1.0E-38 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMIS_46130 5c5f23e16b9af65dfd92900e97d46f56 271 PRINTS PR00069 Aldo-keto reductase signature 89 107 1.0E-38 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMIS_55160 26ec7db4aab10d9e4bbe3ee84c921ecc 326 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 310 2.3E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_55160 26ec7db4aab10d9e4bbe3ee84c921ecc 326 SUPERFAMILY SSF161098 81 309 1.57E-56 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_55160 26ec7db4aab10d9e4bbe3ee84c921ecc 326 SUPERFAMILY SSF160964 33 71 1.14E-5 T 14-10-2018 AMIS_55160 26ec7db4aab10d9e4bbe3ee84c921ecc 326 Gene3D G3DSA:1.10.3720.10 77 317 3.8E-67 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_8540 8d746909ea6c8eb43391162af35fa40a 316 Gene3D G3DSA:3.40.50.10680 7 283 5.8E-93 T 14-10-2018 AMIS_8540 8d746909ea6c8eb43391162af35fa40a 316 Gene3D G3DSA:1.10.8.240 39 127 5.8E-93 T 14-10-2018 AMIS_8540 8d746909ea6c8eb43391162af35fa40a 316 TIGRFAM TIGR01819 F420_cofD: 2-phospho-L-lactate transferase 3 311 8.8E-114 T 14-10-2018 IPR010115 2-phospho-L-lactate transferase GO:0000287|GO:0016780|GO:0051188 KEGG: 00680+2.7.8.28|MetaCyc: PWY-5198 AMIS_8540 8d746909ea6c8eb43391162af35fa40a 316 Pfam PF01933 Uncharacterised protein family UPF0052 3 280 7.2E-62 T 14-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 AMIS_8540 8d746909ea6c8eb43391162af35fa40a 316 SUPERFAMILY SSF142338 3 315 4.84E-76 T 14-10-2018 AMIS_8540 8d746909ea6c8eb43391162af35fa40a 316 Hamap MF_01257 2-phospho-L-lactate transferase [cofD]. 1 316 127.721 T 14-10-2018 IPR010115 2-phospho-L-lactate transferase GO:0000287|GO:0016780|GO:0051188 KEGG: 00680+2.7.8.28|MetaCyc: PWY-5198 AMIS_9070 3ff38271a303fa89bad5aa7c9d2c95a7 318 Pfam PF01965 DJ-1/PfpI family 4 173 1.5E-18 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 AMIS_9070 3ff38271a303fa89bad5aa7c9d2c95a7 318 SUPERFAMILY SSF52317 4 194 4.58E-47 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_9070 3ff38271a303fa89bad5aa7c9d2c95a7 318 SUPERFAMILY SSF46689 216 262 1.08E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_9070 3ff38271a303fa89bad5aa7c9d2c95a7 318 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 218 257 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AMIS_9070 3ff38271a303fa89bad5aa7c9d2c95a7 318 Pfam PF12833 Helix-turn-helix domain 234 312 3.6E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMIS_9070 3ff38271a303fa89bad5aa7c9d2c95a7 318 SMART SM00342 228 311 8.8E-25 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMIS_9070 3ff38271a303fa89bad5aa7c9d2c95a7 318 SUPERFAMILY SSF46689 264 315 2.46E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_9070 3ff38271a303fa89bad5aa7c9d2c95a7 318 Gene3D G3DSA:3.40.50.880 2 206 1.1E-55 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_9070 3ff38271a303fa89bad5aa7c9d2c95a7 318 Gene3D G3DSA:1.10.10.60 214 317 6.8E-25 T 14-10-2018 AMIS_31740 22ea57afb7c1f5e60b7cc9c35d0db75d 283 Pfam PF12697 Alpha/beta hydrolase family 53 275 1.4E-17 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_31740 22ea57afb7c1f5e60b7cc9c35d0db75d 283 Gene3D G3DSA:3.40.50.1820 45 283 3.5E-43 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_31740 22ea57afb7c1f5e60b7cc9c35d0db75d 283 SUPERFAMILY SSF53474 50 279 1.49E-29 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_51890 2f67aeefcca7cb7d42603e9c37f7ffa8 210 PIRSF PIRSF000847 14 202 7.3E-47 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 AMIS_51890 2f67aeefcca7cb7d42603e9c37f7ffa8 210 Gene3D G3DSA:1.20.120.1760 9 195 1.0E-9 T 14-10-2018 AMIS_51890 2f67aeefcca7cb7d42603e9c37f7ffa8 210 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 61 83 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AMIS_51890 2f67aeefcca7cb7d42603e9c37f7ffa8 210 Pfam PF01066 CDP-alcohol phosphatidyltransferase 19 83 7.8E-16 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AMIS_33590 f0b9416e7c030554b63a24ac12f20ca6 238 Pfam PF00756 Putative esterase 32 170 3.3E-11 T 14-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 AMIS_33590 f0b9416e7c030554b63a24ac12f20ca6 238 SUPERFAMILY SSF53474 23 237 2.45E-26 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_33590 f0b9416e7c030554b63a24ac12f20ca6 238 Gene3D G3DSA:3.40.50.1820 15 236 7.1E-28 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_8280 c114c9bdb313335c7e41c2afd2bfc72e 341 SMART SM00354 3 73 9.6E-26 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_8280 c114c9bdb313335c7e41c2afd2bfc72e 341 Gene3D G3DSA:1.10.260.40 1 58 2.2E-20 T 14-10-2018 AMIS_8280 c114c9bdb313335c7e41c2afd2bfc72e 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 5 15 9.0E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_8280 c114c9bdb313335c7e41c2afd2bfc72e 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 15 25 9.0E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_8280 c114c9bdb313335c7e41c2afd2bfc72e 341 Pfam PF13377 Periplasmic binding protein-like domain 171 328 1.2E-37 T 14-10-2018 AMIS_8280 c114c9bdb313335c7e41c2afd2bfc72e 341 SUPERFAMILY SSF47413 3 61 1.41E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_8280 c114c9bdb313335c7e41c2afd2bfc72e 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 50 1.1E-15 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_8280 c114c9bdb313335c7e41c2afd2bfc72e 341 Gene3D G3DSA:3.40.50.2300 64 320 1.6E-66 T 14-10-2018 AMIS_8280 c114c9bdb313335c7e41c2afd2bfc72e 341 Gene3D G3DSA:3.40.50.2300 163 325 1.6E-66 T 14-10-2018 AMIS_8280 c114c9bdb313335c7e41c2afd2bfc72e 341 SUPERFAMILY SSF53822 63 329 2.75E-59 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_5360 c1ea3f00a3b362b312c7cae99d889a29 622 SMART SM00490 280 361 7.2E-35 T 14-10-2018 IPR001650 Helicase, C-terminal AMIS_5360 c1ea3f00a3b362b312c7cae99d889a29 622 Pfam PF00271 Helicase conserved C-terminal domain 253 361 1.8E-29 T 14-10-2018 IPR001650 Helicase, C-terminal AMIS_5360 c1ea3f00a3b362b312c7cae99d889a29 622 SUPERFAMILY SSF52540 94 379 1.33E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_5360 c1ea3f00a3b362b312c7cae99d889a29 622 Pfam PF00270 DEAD/DEAH box helicase 47 212 8.9E-48 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMIS_5360 c1ea3f00a3b362b312c7cae99d889a29 622 Gene3D G3DSA:3.40.50.300 2 230 6.9E-72 T 14-10-2018 AMIS_5360 c1ea3f00a3b362b312c7cae99d889a29 622 Gene3D G3DSA:3.40.50.300 240 401 1.4E-47 T 14-10-2018 AMIS_5360 c1ea3f00a3b362b312c7cae99d889a29 622 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 173 181 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AMIS_5360 c1ea3f00a3b362b312c7cae99d889a29 622 SMART SM00487 41 244 4.2E-54 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMIS_24150 33b0a9d2eaf27a8b49fb7e738a316e6c 245 SMART SM00100 28 146 7.8E-12 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain AMIS_24150 33b0a9d2eaf27a8b49fb7e738a316e6c 245 Gene3D G3DSA:2.60.120.10 26 161 5.7E-24 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMIS_24150 33b0a9d2eaf27a8b49fb7e738a316e6c 245 Pfam PF13545 Crp-like helix-turn-helix domain 167 240 1.6E-13 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMIS_24150 33b0a9d2eaf27a8b49fb7e738a316e6c 245 Pfam PF00027 Cyclic nucleotide-binding domain 48 133 6.5E-12 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain AMIS_24150 33b0a9d2eaf27a8b49fb7e738a316e6c 245 SMART SM00419 185 233 0.004 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMIS_24150 33b0a9d2eaf27a8b49fb7e738a316e6c 245 Gene3D G3DSA:1.10.10.10 162 245 2.5E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_24150 33b0a9d2eaf27a8b49fb7e738a316e6c 245 SUPERFAMILY SSF46785 164 242 1.51E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_24150 33b0a9d2eaf27a8b49fb7e738a316e6c 245 SUPERFAMILY SSF51206 32 159 3.8E-21 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like AMIS_170 d7d064393c589b9be66a526f47320482 144 SUPERFAMILY SSF82649 3 137 9.94E-25 T 14-10-2018 AMIS_170 d7d064393c589b9be66a526f47320482 144 Pfam PF02657 Fe-S metabolism associated domain 14 136 9.4E-24 T 14-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like AMIS_170 d7d064393c589b9be66a526f47320482 144 Gene3D G3DSA:3.90.1010.10 3 142 5.4E-46 T 14-10-2018 AMIS_70070 228542bd6ee6d73b9260715088545824 276 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AMIS_70070 228542bd6ee6d73b9260715088545824 276 SUPERFAMILY SSF54713 58 141 1.83E-13 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 AMIS_70070 228542bd6ee6d73b9260715088545824 276 SUPERFAMILY SSF46934 5 55 5.83E-16 T 14-10-2018 IPR009060 UBA-like superfamily GO:0005515 AMIS_70070 228542bd6ee6d73b9260715088545824 276 Gene3D G3DSA:3.30.479.20 159 274 3.5E-37 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 AMIS_70070 228542bd6ee6d73b9260715088545824 276 Gene3D G3DSA:1.10.8.10 1 56 1.2E-24 T 14-10-2018 AMIS_70070 228542bd6ee6d73b9260715088545824 276 Gene3D G3DSA:1.10.286.20 194 240 3.5E-37 T 14-10-2018 AMIS_70070 228542bd6ee6d73b9260715088545824 276 Pfam PF00889 Elongation factor TS 68 275 3.2E-63 T 14-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 AMIS_70070 228542bd6ee6d73b9260715088545824 276 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 274 7.4E-78 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AMIS_70070 228542bd6ee6d73b9260715088545824 276 Gene3D G3DSA:3.30.479.20 57 144 3.0E-16 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 AMIS_70070 228542bd6ee6d73b9260715088545824 276 SUPERFAMILY SSF54713 143 275 1.15E-37 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 AMIS_70070 228542bd6ee6d73b9260715088545824 276 ProSitePatterns PS01127 Elongation factor Ts signature 2. 71 81 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AMIS_70070 228542bd6ee6d73b9260715088545824 276 Hamap MF_00050 Elongation factor Ts [tsf]. 1 276 64.423 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AMIS_37100 fc7ccc16d8a3e4a844768fd7ff663d4f 109 Pfam PF13466 STAS domain 17 95 5.4E-15 T 14-10-2018 IPR002645 STAS domain AMIS_37100 fc7ccc16d8a3e4a844768fd7ff663d4f 109 Gene3D G3DSA:3.30.750.24 3 107 2.1E-21 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_37100 fc7ccc16d8a3e4a844768fd7ff663d4f 109 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 4 100 1.3E-15 T 14-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 AMIS_37100 fc7ccc16d8a3e4a844768fd7ff663d4f 109 SUPERFAMILY SSF52091 7 99 1.88E-17 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_26720 452e476fc31760c8630d9ea2e8e02645 146 SUPERFAMILY SSF46785 10 143 1.27E-26 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_26720 452e476fc31760c8630d9ea2e8e02645 146 Gene3D G3DSA:1.10.10.10 14 146 5.5E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_26720 452e476fc31760c8630d9ea2e8e02645 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 87 2.9E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_26720 452e476fc31760c8630d9ea2e8e02645 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 121 141 2.9E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_26720 452e476fc31760c8630d9ea2e8e02645 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 55 71 2.9E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_26720 452e476fc31760c8630d9ea2e8e02645 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 91 107 2.9E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_26720 452e476fc31760c8630d9ea2e8e02645 146 SMART SM00347 31 131 3.0E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_26720 452e476fc31760c8630d9ea2e8e02645 146 Pfam PF01047 MarR family 40 94 2.3E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_48220 a16df91dfb4e4d4dc0182f3e651754cf 109 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 1 100 5.4E-19 T 14-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 AMIS_48220 a16df91dfb4e4d4dc0182f3e651754cf 109 Gene3D G3DSA:3.30.750.24 1 106 5.1E-31 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_48220 a16df91dfb4e4d4dc0182f3e651754cf 109 Pfam PF13466 STAS domain 10 89 8.8E-17 T 14-10-2018 IPR002645 STAS domain AMIS_48220 a16df91dfb4e4d4dc0182f3e651754cf 109 SUPERFAMILY SSF52091 3 104 1.69E-23 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_36820 61bbd61f2a29a63464315b080d33615b 398 Gene3D G3DSA:3.40.50.1820 125 380 5.9E-57 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_36820 61bbd61f2a29a63464315b080d33615b 398 SUPERFAMILY SSF53474 8 379 1.03E-61 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_36820 61bbd61f2a29a63464315b080d33615b 398 Pfam PF00326 Prolyl oligopeptidase family 173 376 7.2E-9 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AMIS_36820 61bbd61f2a29a63464315b080d33615b 398 Gene3D G3DSA:1.20.1440.110 8 122 3.2E-11 T 14-10-2018 AMIS_73940 f28690e16d1f09091fb3b7360a866245 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 60 6.3E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_73940 f28690e16d1f09091fb3b7360a866245 210 Gene3D G3DSA:1.10.357.10 1 209 4.1E-60 T 14-10-2018 AMIS_73940 f28690e16d1f09091fb3b7360a866245 210 SUPERFAMILY SSF48498 76 206 1.56E-29 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_73940 f28690e16d1f09091fb3b7360a866245 210 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMIS_73940 f28690e16d1f09091fb3b7360a866245 210 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 76 203 2.9E-13 T 14-10-2018 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 AMIS_73940 f28690e16d1f09091fb3b7360a866245 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 2.0E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_73940 f28690e16d1f09091fb3b7360a866245 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 2.0E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_73940 f28690e16d1f09091fb3b7360a866245 210 PRINTS PR00400 Tetracycline repressor protein signature 78 97 3.6E-12 T 14-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 AMIS_73940 f28690e16d1f09091fb3b7360a866245 210 PRINTS PR00400 Tetracycline repressor protein signature 186 200 3.6E-12 T 14-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 AMIS_73940 f28690e16d1f09091fb3b7360a866245 210 PRINTS PR00400 Tetracycline repressor protein signature 26 49 3.6E-12 T 14-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 AMIS_73940 f28690e16d1f09091fb3b7360a866245 210 SUPERFAMILY SSF46689 2 67 4.44E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_67660 a47b38d060a8ba00da25cd7b1ecfd7a2 211 SMART SM00448 1 120 2.5E-12 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_67660 a47b38d060a8ba00da25cd7b1ecfd7a2 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 192 1.7E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_67660 a47b38d060a8ba00da25cd7b1ecfd7a2 211 SMART SM00421 145 207 1.8E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_67660 a47b38d060a8ba00da25cd7b1ecfd7a2 211 Pfam PF00072 Response regulator receiver domain 3 108 8.8E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_67660 a47b38d060a8ba00da25cd7b1ecfd7a2 211 SUPERFAMILY SSF52172 2 136 2.42E-18 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_67660 a47b38d060a8ba00da25cd7b1ecfd7a2 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 5.5E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_67660 a47b38d060a8ba00da25cd7b1ecfd7a2 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 5.5E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_67660 a47b38d060a8ba00da25cd7b1ecfd7a2 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 5.5E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_67660 a47b38d060a8ba00da25cd7b1ecfd7a2 211 SUPERFAMILY SSF46894 139 192 8.5E-15 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_67660 a47b38d060a8ba00da25cd7b1ecfd7a2 211 Gene3D G3DSA:3.40.50.12740 1 206 3.9E-45 T 14-10-2018 AMIS_77410 8a2353c54ca9577be680333b4353c3cf 168 SUPERFAMILY SSF46785 7 68 4.62E-9 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_77410 8a2353c54ca9577be680333b4353c3cf 168 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 24 35 5.3E-7 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMIS_77410 8a2353c54ca9577be680333b4353c3cf 168 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 8 24 5.3E-7 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMIS_77410 8a2353c54ca9577be680333b4353c3cf 168 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 54 5.3E-7 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMIS_77410 8a2353c54ca9577be680333b4353c3cf 168 SUPERFAMILY SSF54909 68 151 4.29E-16 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel AMIS_77410 8a2353c54ca9577be680333b4353c3cf 168 SMART SM00344 8 115 1.8E-27 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AMIS_77410 8a2353c54ca9577be680333b4353c3cf 168 Gene3D G3DSA:3.30.70.920 61 141 3.9E-20 T 14-10-2018 AMIS_77410 8a2353c54ca9577be680333b4353c3cf 168 Pfam PF01037 Lrp/AsnC ligand binding domain 74 144 3.2E-14 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMIS_77410 8a2353c54ca9577be680333b4353c3cf 168 Gene3D G3DSA:1.10.10.10 1 58 8.0E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_77410 8a2353c54ca9577be680333b4353c3cf 168 Pfam PF13404 AsnC-type helix-turn-helix domain 8 48 8.8E-9 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMIS_73810 c3ef4919eafc0d87686890a0d394859b 349 Pfam PF02653 Branched-chain amino acid transport system / permease component 55 322 2.0E-45 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 AMIS_73810 c3ef4919eafc0d87686890a0d394859b 349 Gene3D G3DSA:1.10.3470.10 71 248 2.1E-6 T 14-10-2018 IPR037294 ABC transporter, BtuC-like AMIS_47110 d105fdf362babff14f7370667e43408b 737 SUPERFAMILY SSF48208 308 727 2.11E-53 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AMIS_47110 d105fdf362babff14f7370667e43408b 737 Gene3D G3DSA:1.50.10.10 3 735 2.0E-260 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 AMIS_47110 d105fdf362babff14f7370667e43408b 737 Pfam PF08531 Alpha-L-rhamnosidase N-terminal domain 32 191 7.7E-43 T 14-10-2018 IPR013737 Bacterial alpha-L-rhamnosidase N-terminal AMIS_47110 d105fdf362babff14f7370667e43408b 737 Pfam PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain 213 307 5.7E-30 T 14-10-2018 IPR008902 Alpha-L-rhamnosidase, concanavalin-like domain AMIS_47110 d105fdf362babff14f7370667e43408b 737 Pfam PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain 311 664 4.9E-118 T 14-10-2018 IPR035396 Alpha-L-rhamnosidase, six-hairpin glycosidase domain AMIS_47110 d105fdf362babff14f7370667e43408b 737 PIRSF PIRSF010631 9 734 1.5E-200 T 14-10-2018 IPR016007 Alpha-L-rhamnosidase AMIS_47110 d105fdf362babff14f7370667e43408b 737 Pfam PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain 666 732 7.5E-15 T 14-10-2018 IPR035398 Alpha-L-rhamnosidase C-terminal domain AMIS_73640 4e57d9ed5e73bfc215081b3d5d1d9aac 366 SUPERFAMILY SSF53383 6 364 1.48E-77 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_73640 4e57d9ed5e73bfc215081b3d5d1d9aac 366 Gene3D G3DSA:3.40.640.10 42 269 3.9E-83 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_73640 4e57d9ed5e73bfc215081b3d5d1d9aac 366 TIGRFAM TIGR03539 DapC_actino: succinyldiaminopimelate transaminase 8 362 1.3E-177 T 14-10-2018 IPR019880 4-dedimethylamino-4-oxo-anhydrotetracycline transaminase OxyQ AMIS_73640 4e57d9ed5e73bfc215081b3d5d1d9aac 366 Pfam PF00155 Aminotransferase class I and II 30 362 2.6E-45 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMIS_73640 4e57d9ed5e73bfc215081b3d5d1d9aac 366 Gene3D G3DSA:3.90.1150.10 20 355 3.9E-83 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMIS_73640 4e57d9ed5e73bfc215081b3d5d1d9aac 366 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 220 233 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 AMIS_40530 a894ee090ae382a7f23a0b049f2033fb 294 Pfam PF12697 Alpha/beta hydrolase family 57 280 2.4E-13 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_40530 a894ee090ae382a7f23a0b049f2033fb 294 Gene3D G3DSA:3.40.50.1820 4 288 5.3E-48 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_40530 a894ee090ae382a7f23a0b049f2033fb 294 SUPERFAMILY SSF53474 36 287 6.4E-39 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_27880 1ea42badd606ff60797b5b95fefe00a9 256 SUPERFAMILY SSF46785 5 77 2.35E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_27880 1ea42badd606ff60797b5b95fefe00a9 256 Gene3D G3DSA:1.10.10.10 2 76 7.3E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_27880 1ea42badd606ff60797b5b95fefe00a9 256 Pfam PF09339 IclR helix-turn-helix domain 7 53 2.5E-13 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AMIS_27880 1ea42badd606ff60797b5b95fefe00a9 256 SMART SM00346 5 95 1.1E-20 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AMIS_27880 1ea42badd606ff60797b5b95fefe00a9 256 Pfam PF01614 Bacterial transcriptional regulator 123 247 1.6E-33 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal AMIS_27880 1ea42badd606ff60797b5b95fefe00a9 256 Gene3D G3DSA:3.30.450.40 78 255 1.2E-57 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_27880 1ea42badd606ff60797b5b95fefe00a9 256 SUPERFAMILY SSF55781 70 252 9.16E-51 T 14-10-2018 AMIS_27590 d4c1380ca64effdbfd3409af2984d9d1 322 SUPERFAMILY SSF48317 35 228 1.7E-13 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily AMIS_27590 d4c1380ca64effdbfd3409af2984d9d1 322 Pfam PF01569 PAP2 superfamily 115 225 5.5E-11 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMIS_27590 d4c1380ca64effdbfd3409af2984d9d1 322 Gene3D G3DSA:1.20.144.10 136 234 2.8E-10 T 14-10-2018 AMIS_25050 d11bf3de43d654226c263d209fa141f8 232 SUPERFAMILY SSF53335 4 214 3.98E-37 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_25050 d11bf3de43d654226c263d209fa141f8 232 Pfam PF08241 Methyltransferase domain 51 145 5.3E-19 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 AMIS_25050 d11bf3de43d654226c263d209fa141f8 232 Gene3D G3DSA:3.40.50.150 9 215 5.2E-36 T 14-10-2018 AMIS_23820 84658e6c67807c1e73238cd9160277bd 411 SUPERFAMILY SSF103473 6 391 4.32E-36 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_23820 84658e6c67807c1e73238cd9160277bd 411 Pfam PF05977 Transmembrane secretion effector 4 393 1.8E-25 T 14-10-2018 IPR010290 Transmembrane secretion effector AMIS_23820 84658e6c67807c1e73238cd9160277bd 411 Gene3D G3DSA:1.20.1250.20 2 385 3.3E-26 T 14-10-2018 AMIS_56140 74cc808bbb202ce943f10b0f49e30627 486 Pfam PF00171 Aldehyde dehydrogenase family 18 475 2.0E-144 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AMIS_56140 74cc808bbb202ce943f10b0f49e30627 486 Gene3D G3DSA:3.40.605.10 14 472 6.3E-145 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AMIS_56140 74cc808bbb202ce943f10b0f49e30627 486 Gene3D G3DSA:3.40.309.10 256 443 6.3E-145 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AMIS_56140 74cc808bbb202ce943f10b0f49e30627 486 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 251 258 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AMIS_56140 74cc808bbb202ce943f10b0f49e30627 486 SUPERFAMILY SSF53720 6 481 2.09E-142 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMIS_29130 e79aad4f01474bd3ae4149ca77e85a80 836 Pfam PF02687 FtsX-like permease family 303 397 1.2E-9 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AMIS_69810 f5cd2349c4f99b4379fd01f4161fcf48 428 SUPERFAMILY SSF55874 301 416 5.45E-18 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_69810 f5cd2349c4f99b4379fd01f4161fcf48 428 Pfam PF07730 Histidine kinase 219 284 4.3E-20 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMIS_69810 f5cd2349c4f99b4379fd01f4161fcf48 428 SMART SM00387 326 419 6.8E-5 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_69810 f5cd2349c4f99b4379fd01f4161fcf48 428 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 329 418 3.3E-6 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_69810 f5cd2349c4f99b4379fd01f4161fcf48 428 Gene3D G3DSA:3.30.565.10 287 417 2.4E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_70100 1a6cd4965b0949f04be84dc843b4768a 119 Hamap MF_00048 UPF0102 protein YraN [yraN]. 5 115 22.088 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 AMIS_70100 1a6cd4965b0949f04be84dc843b4768a 119 SUPERFAMILY SSF52980 7 105 1.39E-19 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AMIS_70100 1a6cd4965b0949f04be84dc843b4768a 119 Pfam PF02021 Uncharacterised protein family UPF0102 12 102 2.7E-26 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 AMIS_70100 1a6cd4965b0949f04be84dc843b4768a 119 Gene3D G3DSA:3.40.1350.10 11 119 2.9E-29 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 AMIS_70100 1a6cd4965b0949f04be84dc843b4768a 119 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 5 107 3.1E-22 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 AMIS_38080 16c5c4d88cb605cf04d308b641ac0da8 309 SUPERFAMILY SSF53850 90 293 1.18E-42 T 14-10-2018 AMIS_38080 16c5c4d88cb605cf04d308b641ac0da8 309 Gene3D G3DSA:1.10.10.10 1 91 5.2E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_38080 16c5c4d88cb605cf04d308b641ac0da8 309 Pfam PF03466 LysR substrate binding domain 89 291 2.4E-45 T 14-10-2018 IPR005119 LysR, substrate-binding AMIS_38080 16c5c4d88cb605cf04d308b641ac0da8 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.2E-11 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_38080 16c5c4d88cb605cf04d308b641ac0da8 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.2E-11 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_38080 16c5c4d88cb605cf04d308b641ac0da8 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.2E-11 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_38080 16c5c4d88cb605cf04d308b641ac0da8 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 7.6E-23 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_38080 16c5c4d88cb605cf04d308b641ac0da8 309 SUPERFAMILY SSF46785 2 85 5.55E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_38080 16c5c4d88cb605cf04d308b641ac0da8 309 Gene3D G3DSA:3.40.190.290 92 295 5.2E-49 T 14-10-2018 AMIS_56710 2251ea90dadf2024cec0be345eb0e1ca 269 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 6 262 6.4E-39 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AMIS_56710 2251ea90dadf2024cec0be345eb0e1ca 269 SUPERFAMILY SSF52518 6 265 1.96E-75 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold AMIS_56710 2251ea90dadf2024cec0be345eb0e1ca 269 Gene3D G3DSA:3.40.50.970 4 268 6.5E-90 T 14-10-2018 AMIS_75470 b15d405c108ea15e9c3205387bea1993 139 TIGRFAM TIGR01068 thioredoxin: thioredoxin 7 102 4.3E-29 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AMIS_75470 b15d405c108ea15e9c3205387bea1993 139 PRINTS PR00421 Thioredoxin family signature 29 38 2.6E-6 T 14-10-2018 AMIS_75470 b15d405c108ea15e9c3205387bea1993 139 PRINTS PR00421 Thioredoxin family signature 68 79 2.6E-6 T 14-10-2018 AMIS_75470 b15d405c108ea15e9c3205387bea1993 139 PRINTS PR00421 Thioredoxin family signature 21 29 2.6E-6 T 14-10-2018 AMIS_75470 b15d405c108ea15e9c3205387bea1993 139 SUPERFAMILY SSF52833 4 102 1.65E-32 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMIS_75470 b15d405c108ea15e9c3205387bea1993 139 ProSitePatterns PS00194 Thioredoxin family active site. 22 40 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AMIS_75470 b15d405c108ea15e9c3205387bea1993 139 Gene3D G3DSA:3.40.30.10 1 119 5.4E-30 T 14-10-2018 AMIS_75470 b15d405c108ea15e9c3205387bea1993 139 Pfam PF00085 Thioredoxin 4 102 8.5E-25 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 AMIS_19460 c819122c65d7f7a0f052d259dad75ace 364 SUPERFAMILY SSF51412 2 361 1.83E-50 T 14-10-2018 AMIS_19460 c819122c65d7f7a0f052d259dad75ace 364 Gene3D G3DSA:3.20.20.70 1 362 4.9E-95 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_19460 c819122c65d7f7a0f052d259dad75ace 364 Pfam PF03060 Nitronate monooxygenase 16 351 1.5E-52 T 14-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 AMIS_44890 bb8672e19e811fd0d69a5755f232f573 291 Gene3D G3DSA:1.10.3720.10 89 284 3.5E-31 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_44890 bb8672e19e811fd0d69a5755f232f573 291 SUPERFAMILY SSF161098 92 278 7.85E-36 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_44890 bb8672e19e811fd0d69a5755f232f573 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 280 7.9E-28 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_30890 60b97861d8891adf7608129b38a61af7 1810 Gene3D G3DSA:1.10.287.130 1564 1646 2.2E-16 T 14-10-2018 AMIS_30890 60b97861d8891adf7608129b38a61af7 1810 SUPERFAMILY SSF55785 1423 1548 2.79E-22 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_30890 60b97861d8891adf7608129b38a61af7 1810 SMART SM00091 1435 1501 1.4E-7 T 14-10-2018 IPR000014 PAS domain AMIS_30890 60b97861d8891adf7608129b38a61af7 1810 ProSitePatterns PS00109 Tyrosine protein kinases specific active-site signature. 107 119 - T 14-10-2018 IPR008266 Tyrosine-protein kinase, active site GO:0004672|GO:0006468 AMIS_30890 60b97861d8891adf7608129b38a61af7 1810 Pfam PF13191 AAA ATPase domain 272 456 6.2E-30 T 14-10-2018 AMIS_30890 60b97861d8891adf7608129b38a61af7 1810 SUPERFAMILY SSF52540 270 535 6.59E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_30890 60b97861d8891adf7608129b38a61af7 1810 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1684 1792 1.5E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_30890 60b97861d8891adf7608129b38a61af7 1810 SMART SM00388 1577 1643 5.4E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_30890 60b97861d8891adf7608129b38a61af7 1810 Gene3D G3DSA:3.30.565.10 1651 1796 1.3E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_30890 60b97861d8891adf7608129b38a61af7 1810 SMART SM00086 1508 1550 7.4E-7 T 14-10-2018 IPR001610 PAC motif AMIS_30890 60b97861d8891adf7608129b38a61af7 1810 Gene3D G3DSA:3.30.450.20 1422 1547 5.5E-22 T 14-10-2018 AMIS_30890 60b97861d8891adf7608129b38a61af7 1810 Gene3D G3DSA:3.30.450.40 1240 1416 3.0E-23 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_30890 60b97861d8891adf7608129b38a61af7 1810 SUPERFAMILY SSF56112 33 247 3.74E-35 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMIS_30890 60b97861d8891adf7608129b38a61af7 1810 Gene3D G3DSA:3.40.50.300 268 462 6.3E-6 T 14-10-2018 AMIS_30890 60b97861d8891adf7608129b38a61af7 1810 SUPERFAMILY SSF47384 1563 1644 5.89E-16 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_30890 60b97861d8891adf7608129b38a61af7 1810 SUPERFAMILY SSF55781 1244 1414 3.71E-20 T 14-10-2018 AMIS_30890 60b97861d8891adf7608129b38a61af7 1810 Pfam PF00069 Protein kinase domain 83 246 1.9E-19 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMIS_30890 60b97861d8891adf7608129b38a61af7 1810 SUPERFAMILY SSF55874 1632 1793 3.54E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_30890 60b97861d8891adf7608129b38a61af7 1810 Pfam PF13426 PAS domain 1454 1548 2.4E-12 T 14-10-2018 IPR000014 PAS domain AMIS_30890 60b97861d8891adf7608129b38a61af7 1810 SMART SM00065 1257 1413 3.8E-8 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_30890 60b97861d8891adf7608129b38a61af7 1810 SMART SM00220 7 248 1.3E-12 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMIS_30890 60b97861d8891adf7608129b38a61af7 1810 Pfam PF01590 GAF domain 1314 1403 3.1E-9 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_30890 60b97861d8891adf7608129b38a61af7 1810 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1777 1790 1.7E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_30890 60b97861d8891adf7608129b38a61af7 1810 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1753 1771 1.7E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_30890 60b97861d8891adf7608129b38a61af7 1810 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1719 1733 1.7E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_30890 60b97861d8891adf7608129b38a61af7 1810 SMART SM00387 1682 1793 1.6E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_30890 60b97861d8891adf7608129b38a61af7 1810 Pfam PF00512 His Kinase A (phospho-acceptor) domain 1578 1643 1.0E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_30890 60b97861d8891adf7608129b38a61af7 1810 Gene3D G3DSA:1.10.510.10 79 252 8.8E-36 T 14-10-2018 AMIS_30890 60b97861d8891adf7608129b38a61af7 1810 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 1432 1556 3.9E-20 T 14-10-2018 IPR000014 PAS domain AMIS_32940 8c608685eec623146d6dff8e8aa0596a 465 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 211 228 4.2E-39 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMIS_32940 8c608685eec623146d6dff8e8aa0596a 465 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 159 187 4.2E-39 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMIS_32940 8c608685eec623146d6dff8e8aa0596a 465 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 135 148 4.2E-39 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMIS_32940 8c608685eec623146d6dff8e8aa0596a 465 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 306 332 4.2E-39 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMIS_32940 8c608685eec623146d6dff8e8aa0596a 465 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 229 245 4.2E-39 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMIS_32940 8c608685eec623146d6dff8e8aa0596a 465 Gene3D G3DSA:3.40.50.720 10 413 1.9E-145 T 14-10-2018 AMIS_32940 8c608685eec623146d6dff8e8aa0596a 465 SUPERFAMILY SSF55347 169 458 2.22E-81 T 14-10-2018 AMIS_32940 8c608685eec623146d6dff8e8aa0596a 465 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 182 456 7.3E-81 T 14-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMIS_32940 8c608685eec623146d6dff8e8aa0596a 465 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 7 464 66.983 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMIS_32940 8c608685eec623146d6dff8e8aa0596a 465 SUPERFAMILY SSF51735 8 180 2.36E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_32940 8c608685eec623146d6dff8e8aa0596a 465 PIRSF PIRSF000110 1 462 1.4E-133 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMIS_32940 8c608685eec623146d6dff8e8aa0596a 465 Gene3D G3DSA:3.30.360.10 169 449 1.9E-145 T 14-10-2018 AMIS_32940 8c608685eec623146d6dff8e8aa0596a 465 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 11 174 2.4E-41 T 14-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMIS_32940 8c608685eec623146d6dff8e8aa0596a 465 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 8 456 2.3E-131 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMIS_37880 b3bda1582f68008d042651c0b63d7816 699 Gene3D G3DSA:3.40.50.880 547 692 2.0E-30 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_37880 b3bda1582f68008d042651c0b63d7816 699 Gene3D G3DSA:1.20.1370.20 450 541 1.5E-27 T 14-10-2018 AMIS_37880 b3bda1582f68008d042651c0b63d7816 699 Pfam PF00199 Catalase 37 422 5.6E-165 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AMIS_37880 b3bda1582f68008d042651c0b63d7816 699 PRINTS PR00067 Catalase signature 113 131 6.0E-69 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AMIS_37880 b3bda1582f68008d042651c0b63d7816 699 PRINTS PR00067 Catalase signature 323 350 6.0E-69 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AMIS_37880 b3bda1582f68008d042651c0b63d7816 699 PRINTS PR00067 Catalase signature 50 73 6.0E-69 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AMIS_37880 b3bda1582f68008d042651c0b63d7816 699 PRINTS PR00067 Catalase signature 355 381 6.0E-69 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AMIS_37880 b3bda1582f68008d042651c0b63d7816 699 PRINTS PR00067 Catalase signature 153 171 6.0E-69 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AMIS_37880 b3bda1582f68008d042651c0b63d7816 699 PRINTS PR00067 Catalase signature 134 151 6.0E-69 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AMIS_37880 b3bda1582f68008d042651c0b63d7816 699 Gene3D G3DSA:2.40.180.10 2 449 8.7E-191 T 14-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 AMIS_37880 b3bda1582f68008d042651c0b63d7816 699 PIRSF PIRSF038927 10 691 3.4E-296 T 14-10-2018 IPR024712 Catalase, mono-functional, haem-containing, clade 2 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 AMIS_37880 b3bda1582f68008d042651c0b63d7816 699 SMART SM01060 37 426 2.9E-247 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AMIS_37880 b3bda1582f68008d042651c0b63d7816 699 Pfam PF06628 Catalase-related immune-responsive 457 518 2.2E-20 T 14-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AMIS_37880 b3bda1582f68008d042651c0b63d7816 699 SUPERFAMILY SSF52317 549 686 3.54E-9 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_37880 b3bda1582f68008d042651c0b63d7816 699 ProSitePatterns PS00438 Catalase proximal active site signature. 73 89 - T 14-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AMIS_37880 b3bda1582f68008d042651c0b63d7816 699 SUPERFAMILY SSF56634 32 527 5.1E-201 T 14-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AMIS_37880 b3bda1582f68008d042651c0b63d7816 699 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 368 376 - T 14-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AMIS_6200 35d1780438c71033791b86a06ddfde88 207 SUPERFAMILY SSF54211 108 186 2.38E-25 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMIS_6200 35d1780438c71033791b86a06ddfde88 207 Gene3D G3DSA:3.30.160.20 33 100 3.3E-28 T 14-10-2018 AMIS_6200 35d1780438c71033791b86a06ddfde88 207 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 4 191 34.443 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 AMIS_6200 35d1780438c71033791b86a06ddfde88 207 ProSitePatterns PS00585 Ribosomal protein S5 signature. 56 88 - T 14-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site AMIS_6200 35d1780438c71033791b86a06ddfde88 207 Pfam PF03719 Ribosomal protein S5, C-terminal domain 114 185 1.7E-29 T 14-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 AMIS_6200 35d1780438c71033791b86a06ddfde88 207 Gene3D G3DSA:3.30.230.10 105 194 5.9E-35 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMIS_6200 35d1780438c71033791b86a06ddfde88 207 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 40 191 1.4E-66 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 AMIS_6200 35d1780438c71033791b86a06ddfde88 207 Pfam PF00333 Ribosomal protein S5, N-terminal domain 41 103 5.8E-27 T 14-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 AMIS_6200 35d1780438c71033791b86a06ddfde88 207 SUPERFAMILY SSF54768 38 104 1.15E-21 T 14-10-2018 AMIS_68070 addda7b3adab388731c42ca287fe1547 356 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 236 5.2E-17 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AMIS_68070 addda7b3adab388731c42ca287fe1547 356 Gene3D G3DSA:3.40.50.720 1 321 1.1E-41 T 14-10-2018 AMIS_68070 addda7b3adab388731c42ca287fe1547 356 SUPERFAMILY SSF51735 1 322 1.76E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_57940 a07fdb7aaadafd5b07d418cb8e2b5446 743 SMART SM00632 417 503 7.7E-13 T 14-10-2018 IPR031319 Alpha-amylase, C-terminal domain Reactome: R-HSA-189085 AMIS_57940 a07fdb7aaadafd5b07d418cb8e2b5446 743 SUPERFAMILY SSF51445 43 380 3.98E-68 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_57940 a07fdb7aaadafd5b07d418cb8e2b5446 743 SUPERFAMILY SSF49452 547 640 2.94E-28 T 14-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 AMIS_57940 a07fdb7aaadafd5b07d418cb8e2b5446 743 SMART SM01065 648 740 2.0E-30 T 14-10-2018 IPR002044 Carbohydrate binding module family 20 GO:2001070 AMIS_57940 a07fdb7aaadafd5b07d418cb8e2b5446 743 SMART SM01065 550 642 9.4E-25 T 14-10-2018 IPR002044 Carbohydrate binding module family 20 GO:2001070 AMIS_57940 a07fdb7aaadafd5b07d418cb8e2b5446 743 Gene3D G3DSA:2.60.40.10 644 743 9.5E-33 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_57940 a07fdb7aaadafd5b07d418cb8e2b5446 743 Gene3D G3DSA:2.60.40.10 540 643 2.9E-31 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_57940 a07fdb7aaadafd5b07d418cb8e2b5446 743 PRINTS PR00110 Alpha-amylase signature 124 135 1.6E-16 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 AMIS_57940 a07fdb7aaadafd5b07d418cb8e2b5446 743 PRINTS PR00110 Alpha-amylase signature 261 279 1.6E-16 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 AMIS_57940 a07fdb7aaadafd5b07d418cb8e2b5446 743 PRINTS PR00110 Alpha-amylase signature 227 238 1.6E-16 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 AMIS_57940 a07fdb7aaadafd5b07d418cb8e2b5446 743 PRINTS PR00110 Alpha-amylase signature 92 109 1.6E-16 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 AMIS_57940 a07fdb7aaadafd5b07d418cb8e2b5446 743 PRINTS PR00110 Alpha-amylase signature 316 328 1.6E-16 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 AMIS_57940 a07fdb7aaadafd5b07d418cb8e2b5446 743 Pfam PF00686 Starch binding domain 649 739 2.5E-30 T 14-10-2018 IPR002044 Carbohydrate binding module family 20 GO:2001070 AMIS_57940 a07fdb7aaadafd5b07d418cb8e2b5446 743 Pfam PF00686 Starch binding domain 551 636 8.6E-28 T 14-10-2018 IPR002044 Carbohydrate binding module family 20 GO:2001070 AMIS_57940 a07fdb7aaadafd5b07d418cb8e2b5446 743 Gene3D G3DSA:2.60.40.1180 415 504 1.8E-21 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta AMIS_57940 a07fdb7aaadafd5b07d418cb8e2b5446 743 SUPERFAMILY SSF49452 649 742 5.15E-32 T 14-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 AMIS_57940 a07fdb7aaadafd5b07d418cb8e2b5446 743 Pfam PF00128 Alpha amylase, catalytic domain 101 362 6.4E-18 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMIS_57940 a07fdb7aaadafd5b07d418cb8e2b5446 743 SUPERFAMILY SSF51011 416 503 3.47E-20 T 14-10-2018 AMIS_57940 a07fdb7aaadafd5b07d418cb8e2b5446 743 SMART SM00642 42 408 1.5E-55 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMIS_57940 a07fdb7aaadafd5b07d418cb8e2b5446 743 Gene3D G3DSA:3.20.20.80 34 413 1.7E-118 T 14-10-2018 AMIS_32130 233d383508d670d2908b817c65fa00e0 166 SUPERFAMILY SSF46785 9 69 4.39E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_32130 233d383508d670d2908b817c65fa00e0 166 SUPERFAMILY SSF54909 71 145 2.55E-11 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel AMIS_32130 233d383508d670d2908b817c65fa00e0 166 Gene3D G3DSA:1.10.10.10 2 60 4.9E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_32130 233d383508d670d2908b817c65fa00e0 166 Pfam PF01037 Lrp/AsnC ligand binding domain 91 141 1.8E-9 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMIS_32130 233d383508d670d2908b817c65fa00e0 166 Gene3D G3DSA:3.30.70.920 61 148 3.2E-17 T 14-10-2018 AMIS_32130 233d383508d670d2908b817c65fa00e0 166 SMART SM00344 9 115 5.7E-31 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AMIS_32130 233d383508d670d2908b817c65fa00e0 166 Pfam PF13404 AsnC-type helix-turn-helix domain 9 50 2.2E-17 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMIS_32130 233d383508d670d2908b817c65fa00e0 166 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 9 25 2.6E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMIS_32130 233d383508d670d2908b817c65fa00e0 166 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 25 36 2.6E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMIS_32130 233d383508d670d2908b817c65fa00e0 166 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 36 55 2.6E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMIS_7020 082418a35ec28e6480a839e5ed86a35b 595 Pfam PF04024 PspC domain 140 195 1.7E-13 T 14-10-2018 IPR007168 Phage shock protein, PspC, N-terminal AMIS_22800 7b0b104bb4bf507fb499fa7b133acc50 247 SUPERFAMILY SSF46785 6 82 3.43E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_22800 7b0b104bb4bf507fb499fa7b133acc50 247 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 4.8E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_22800 7b0b104bb4bf507fb499fa7b133acc50 247 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 4.8E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_22800 7b0b104bb4bf507fb499fa7b133acc50 247 Gene3D G3DSA:1.10.10.10 5 83 4.8E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_22800 7b0b104bb4bf507fb499fa7b133acc50 247 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 73 1.0E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_22800 7b0b104bb4bf507fb499fa7b133acc50 247 SMART SM00866 96 239 1.2E-18 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AMIS_22800 7b0b104bb4bf507fb499fa7b133acc50 247 Pfam PF07702 UTRA domain 103 236 1.1E-25 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AMIS_22800 7b0b104bb4bf507fb499fa7b133acc50 247 SMART SM00345 14 73 5.5E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_22800 7b0b104bb4bf507fb499fa7b133acc50 247 SUPERFAMILY SSF64288 61 244 3.57E-35 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AMIS_22800 7b0b104bb4bf507fb499fa7b133acc50 247 Gene3D G3DSA:3.40.1410.10 99 244 2.8E-33 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AMIS_7000 e0019d8b4e901deb51b86ea3d4966f8c 414 TIGRFAM TIGR00164 PS_decarb_rel: phosphatidylserine decarboxylase homolog 235 412 3.7E-45 T 14-10-2018 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 AMIS_7000 e0019d8b4e901deb51b86ea3d4966f8c 414 Pfam PF02666 Phosphatidylserine decarboxylase 247 410 1.2E-22 T 14-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 AMIS_30460 62bff318fb4e10c9f681efadbdda9ad7 247 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 143 233 7.4E-10 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 AMIS_30460 62bff318fb4e10c9f681efadbdda9ad7 247 Gene3D G3DSA:3.30.230.10 89 240 3.7E-22 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMIS_30460 62bff318fb4e10c9f681efadbdda9ad7 247 SUPERFAMILY SSF54211 117 235 2.81E-22 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMIS_58060 00606b8e5ab1807489f189fd97627789 224 SUPERFAMILY SSF51735 3 199 5.83E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_58060 00606b8e5ab1807489f189fd97627789 224 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 3 91 2.7E-19 T 14-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal AMIS_58060 00606b8e5ab1807489f189fd97627789 224 Gene3D G3DSA:3.40.50.720 1 195 4.5E-55 T 14-10-2018 AMIS_39980 11aa19ca91dc03fc76d38f1972d6eb02 270 SUPERFAMILY SSF52096 2 262 1.08E-67 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMIS_39980 11aa19ca91dc03fc76d38f1972d6eb02 270 Gene3D G3DSA:3.90.226.10 1 203 1.9E-64 T 14-10-2018 AMIS_39980 11aa19ca91dc03fc76d38f1972d6eb02 270 Gene3D G3DSA:1.10.12.10 205 261 1.9E-6 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal AMIS_39980 11aa19ca91dc03fc76d38f1972d6eb02 270 Pfam PF00378 Enoyl-CoA hydratase/isomerase 8 223 7.3E-41 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AMIS_39980 11aa19ca91dc03fc76d38f1972d6eb02 270 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 105 125 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 AMIS_3100 6df7e291c5426efa3568ef92e1ff7abf 1097 Gene3D G3DSA:2.60.120.380 937 1029 1.2E-11 T 14-10-2018 AMIS_3100 6df7e291c5426efa3568ef92e1ff7abf 1097 Pfam PF00082 Subtilase family 194 631 2.2E-54 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AMIS_3100 6df7e291c5426efa3568ef92e1ff7abf 1097 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 578 588 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site AMIS_3100 6df7e291c5426efa3568ef92e1ff7abf 1097 Gene3D G3DSA:3.40.50.200 178 269 7.8E-8 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AMIS_3100 6df7e291c5426efa3568ef92e1ff7abf 1097 Gene3D G3DSA:3.40.50.200 335 651 4.0E-63 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AMIS_3100 6df7e291c5426efa3568ef92e1ff7abf 1097 SUPERFAMILY SSF52743 173 643 4.84E-54 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AMIS_3100 6df7e291c5426efa3568ef92e1ff7abf 1097 Gene3D G3DSA:3.30.70.80 74 144 4.4E-5 T 14-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 AMIS_3100 6df7e291c5426efa3568ef92e1ff7abf 1097 PRINTS PR00723 Subtilisin serine protease family (S8) signature 194 213 1.2E-14 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMIS_3100 6df7e291c5426efa3568ef92e1ff7abf 1097 PRINTS PR00723 Subtilisin serine protease family (S8) signature 577 593 1.2E-14 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMIS_3100 6df7e291c5426efa3568ef92e1ff7abf 1097 PRINTS PR00723 Subtilisin serine protease family (S8) signature 379 392 1.2E-14 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMIS_3100 6df7e291c5426efa3568ef92e1ff7abf 1097 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 199 210 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site AMIS_3100 6df7e291c5426efa3568ef92e1ff7abf 1097 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 949 1013 1.3E-8 T 14-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial AMIS_14030 b6adeb2df6217fdb6f33585af301db5c 184 Pfam PF01381 Helix-turn-helix 15 67 3.2E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMIS_14030 b6adeb2df6217fdb6f33585af301db5c 184 SUPERFAMILY SSF51182 62 180 4.13E-21 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily AMIS_14030 b6adeb2df6217fdb6f33585af301db5c 184 Pfam PF07883 Cupin domain 113 180 3.5E-9 T 14-10-2018 IPR013096 Cupin 2, conserved barrel AMIS_14030 b6adeb2df6217fdb6f33585af301db5c 184 Gene3D G3DSA:2.60.120.10 97 184 1.3E-17 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMIS_14030 b6adeb2df6217fdb6f33585af301db5c 184 Gene3D G3DSA:1.10.260.40 1 78 9.0E-17 T 14-10-2018 AMIS_14030 b6adeb2df6217fdb6f33585af301db5c 184 SMART SM00530 14 69 2.6E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMIS_14030 b6adeb2df6217fdb6f33585af301db5c 184 SUPERFAMILY SSF47413 10 75 3.94E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_45600 3d89db6d9a2d0e5c48833b9cc79b8fcf 332 Gene3D G3DSA:3.40.50.1980 44 197 1.7E-53 T 14-10-2018 AMIS_45600 3d89db6d9a2d0e5c48833b9cc79b8fcf 332 Gene3D G3DSA:3.40.50.1980 198 331 6.2E-38 T 14-10-2018 AMIS_45600 3d89db6d9a2d0e5c48833b9cc79b8fcf 332 PRINTS PR00690 Adhesin family signature 74 87 2.0E-27 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 AMIS_45600 3d89db6d9a2d0e5c48833b9cc79b8fcf 332 PRINTS PR00690 Adhesin family signature 43 61 2.0E-27 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 AMIS_45600 3d89db6d9a2d0e5c48833b9cc79b8fcf 332 PRINTS PR00690 Adhesin family signature 267 285 2.0E-27 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 AMIS_45600 3d89db6d9a2d0e5c48833b9cc79b8fcf 332 PRINTS PR00690 Adhesin family signature 212 233 2.0E-27 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 AMIS_45600 3d89db6d9a2d0e5c48833b9cc79b8fcf 332 PRINTS PR00690 Adhesin family signature 87 104 2.0E-27 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 AMIS_45600 3d89db6d9a2d0e5c48833b9cc79b8fcf 332 PRINTS PR00690 Adhesin family signature 296 315 2.0E-27 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 AMIS_45600 3d89db6d9a2d0e5c48833b9cc79b8fcf 332 Pfam PF01297 Zinc-uptake complex component A periplasmic 46 329 8.6E-78 T 14-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 AMIS_45600 3d89db6d9a2d0e5c48833b9cc79b8fcf 332 SUPERFAMILY SSF53807 38 330 2.01E-80 T 14-10-2018 AMIS_45600 3d89db6d9a2d0e5c48833b9cc79b8fcf 332 PRINTS PR00691 Adhesin B signature 263 280 2.9E-18 T 14-10-2018 IPR006129 Adhesin B GO:0007155 AMIS_45600 3d89db6d9a2d0e5c48833b9cc79b8fcf 332 PRINTS PR00691 Adhesin B signature 212 229 2.9E-18 T 14-10-2018 IPR006129 Adhesin B GO:0007155 AMIS_45600 3d89db6d9a2d0e5c48833b9cc79b8fcf 332 PRINTS PR00691 Adhesin B signature 43 64 2.9E-18 T 14-10-2018 IPR006129 Adhesin B GO:0007155 AMIS_45600 3d89db6d9a2d0e5c48833b9cc79b8fcf 332 PRINTS PR00691 Adhesin B signature 68 86 2.9E-18 T 14-10-2018 IPR006129 Adhesin B GO:0007155 AMIS_45600 3d89db6d9a2d0e5c48833b9cc79b8fcf 332 PRINTS PR00691 Adhesin B signature 154 173 2.9E-18 T 14-10-2018 IPR006129 Adhesin B GO:0007155 AMIS_39310 b2c733312715ef10773d4c570e861b86 872 SMART SM00421 813 870 1.8E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_39310 b2c733312715ef10773d4c570e861b86 872 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 830 846 2.5E-5 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_39310 b2c733312715ef10773d4c570e861b86 872 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 816 830 2.5E-5 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_39310 b2c733312715ef10773d4c570e861b86 872 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 846 858 2.5E-5 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_39310 b2c733312715ef10773d4c570e861b86 872 SUPERFAMILY SSF46894 806 867 4.42E-13 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_39310 b2c733312715ef10773d4c570e861b86 872 Gene3D G3DSA:1.10.10.10 825 870 4.0E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_39310 b2c733312715ef10773d4c570e861b86 872 Gene3D G3DSA:1.25.40.10 507 824 9.1E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_39310 b2c733312715ef10773d4c570e861b86 872 Pfam PF00196 Bacterial regulatory proteins, luxR family 815 866 2.7E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_39310 b2c733312715ef10773d4c570e861b86 872 SUPERFAMILY SSF48452 522 656 1.35E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_27060 d395b2a30772a92efb4aa08e5364534d 147 Gene3D G3DSA:3.10.129.10 4 136 5.2E-31 T 14-10-2018 AMIS_27060 d395b2a30772a92efb4aa08e5364534d 147 SUPERFAMILY SSF54637 6 131 1.68E-31 T 14-10-2018 IPR029069 HotDog domain superfamily AMIS_27060 d395b2a30772a92efb4aa08e5364534d 147 Pfam PF03061 Thioesterase superfamily 18 102 2.3E-14 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AMIS_530 31ed749518e8d7d6a436bde66da4bce5 715 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 391 402 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMIS_530 31ed749518e8d7d6a436bde66da4bce5 715 Pfam PF02754 Cysteine-rich domain 600 685 5.5E-16 T 14-10-2018 IPR004017 Cysteine-rich domain AMIS_530 31ed749518e8d7d6a436bde66da4bce5 715 Pfam PF02754 Cysteine-rich domain 472 561 7.2E-17 T 14-10-2018 IPR004017 Cysteine-rich domain AMIS_530 31ed749518e8d7d6a436bde66da4bce5 715 Pfam PF13183 4Fe-4S dicluster domain 297 405 2.8E-13 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMIS_530 31ed749518e8d7d6a436bde66da4bce5 715 SUPERFAMILY SSF46548 283 419 1.74E-21 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AMIS_39610 05206837eb8c8a33c739105172ecb483 358 Pfam PF00296 Luciferase-like monooxygenase 3 325 8.3E-66 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMIS_39610 05206837eb8c8a33c739105172ecb483 358 Gene3D G3DSA:3.20.20.30 1 358 4.1E-87 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_39610 05206837eb8c8a33c739105172ecb483 358 SUPERFAMILY SSF51679 3 351 8.9E-69 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_13400 3493a1435947b6a13c2c3ea1ef91e447 352 SUPERFAMILY SSF51735 1 154 4.9E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_13400 3493a1435947b6a13c2c3ea1ef91e447 352 Gene3D G3DSA:3.40.50.720 5 334 1.2E-97 T 14-10-2018 AMIS_13400 3493a1435947b6a13c2c3ea1ef91e447 352 SUPERFAMILY SSF55347 155 320 4.46E-30 T 14-10-2018 AMIS_13400 3493a1435947b6a13c2c3ea1ef91e447 352 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 160 318 9.8E-25 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_13400 3493a1435947b6a13c2c3ea1ef91e447 352 PIRSF PIRSF000149 1 340 4.8E-77 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_13400 3493a1435947b6a13c2c3ea1ef91e447 352 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 4 103 4.9E-30 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_13400 3493a1435947b6a13c2c3ea1ef91e447 352 Gene3D G3DSA:3.30.360.10 154 321 1.2E-97 T 14-10-2018 AMIS_13400 3493a1435947b6a13c2c3ea1ef91e447 352 SMART SM00846 3 155 1.9E-58 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_13400 3493a1435947b6a13c2c3ea1ef91e447 352 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 149 167 2.2E-10 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_13400 3493a1435947b6a13c2c3ea1ef91e447 352 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 112 125 2.2E-10 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_13400 3493a1435947b6a13c2c3ea1ef91e447 352 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 275 290 2.2E-10 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_50480 e8d58f9788545e61acede85eb2ed1af2 171 Gene3D G3DSA:1.20.120.520 4 159 5.3E-22 T 14-10-2018 AMIS_50480 e8d58f9788545e61acede85eb2ed1af2 171 Pfam PF01814 Hemerythrin HHE cation binding domain 19 147 1.6E-18 T 14-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 AMIS_56050 acd736f7db907d33503fe36a64c2f75c 433 Pfam PF00326 Prolyl oligopeptidase family 115 193 9.0E-7 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AMIS_56050 acd736f7db907d33503fe36a64c2f75c 433 SUPERFAMILY SSF53474 69 396 6.19E-22 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_73000 c61ea4b0b4a7a64f3dbb90d727fc9f37 71 Pfam PF00364 Biotin-requiring enzyme 11 70 3.2E-18 T 14-10-2018 IPR000089 Biotin/lipoyl attachment AMIS_73000 c61ea4b0b4a7a64f3dbb90d727fc9f37 71 Gene3D G3DSA:2.40.50.100 1 70 9.7E-24 T 14-10-2018 AMIS_73000 c61ea4b0b4a7a64f3dbb90d727fc9f37 71 SUPERFAMILY SSF51230 4 70 5.89E-21 T 14-10-2018 IPR011053 Single hybrid motif AMIS_62760 fa7c17e35ee324e262064dc29bedc563 176 Gene3D G3DSA:3.40.50.2020 4 176 3.6E-53 T 14-10-2018 AMIS_62760 fa7c17e35ee324e262064dc29bedc563 176 Pfam PF00156 Phosphoribosyl transferase domain 42 154 1.4E-12 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AMIS_62760 fa7c17e35ee324e262064dc29bedc563 176 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 11 176 32.512 T 14-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 AMIS_62760 fa7c17e35ee324e262064dc29bedc563 176 SUPERFAMILY SSF53271 18 171 3.55E-42 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like AMIS_60510 3568720c7c4e4e780e0fa66b5eb3f5c2 455 Gene3D G3DSA:2.80.10.50 426 455 3.8E-9 T 14-10-2018 AMIS_60510 3568720c7c4e4e780e0fa66b5eb3f5c2 455 Gene3D G3DSA:2.80.10.50 326 425 5.9E-33 T 14-10-2018 AMIS_60510 3568720c7c4e4e780e0fa66b5eb3f5c2 455 SUPERFAMILY SSF50370 326 454 1.44E-40 T 14-10-2018 IPR035992 Ricin B-like lectins AMIS_60510 3568720c7c4e4e780e0fa66b5eb3f5c2 455 SMART SM00636 43 305 2.6E-50 T 14-10-2018 IPR011583 Chitinase II GO:0008061 AMIS_60510 3568720c7c4e4e780e0fa66b5eb3f5c2 455 SUPERFAMILY SSF51445 41 319 1.1E-61 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_60510 3568720c7c4e4e780e0fa66b5eb3f5c2 455 ProSitePatterns PS01095 Chitinases family 18 active site. 144 152 - T 14-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AMIS_60510 3568720c7c4e4e780e0fa66b5eb3f5c2 455 Pfam PF00704 Glycosyl hydrolases family 18 45 305 3.2E-47 T 14-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 AMIS_60510 3568720c7c4e4e780e0fa66b5eb3f5c2 455 Pfam PF00652 Ricin-type beta-trefoil lectin domain 331 452 1.3E-28 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_60510 3568720c7c4e4e780e0fa66b5eb3f5c2 455 Gene3D G3DSA:3.20.20.80 59 308 1.3E-70 T 14-10-2018 AMIS_60510 3568720c7c4e4e780e0fa66b5eb3f5c2 455 SMART SM00458 329 455 4.4E-31 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_60510 3568720c7c4e4e780e0fa66b5eb3f5c2 455 Gene3D G3DSA:3.40.5.30 246 277 1.3E-70 T 14-10-2018 AMIS_28780 106ffaa491dea98e8abe9d5c8ffdf20f 104 Pfam PF00196 Bacterial regulatory proteins, luxR family 41 95 1.4E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_28780 106ffaa491dea98e8abe9d5c8ffdf20f 104 ProSitePatterns PS00622 LuxR-type HTH domain signature. 56 83 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_28780 106ffaa491dea98e8abe9d5c8ffdf20f 104 SUPERFAMILY SSF46894 30 97 2.86E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_28780 106ffaa491dea98e8abe9d5c8ffdf20f 104 SMART SM00421 39 96 2.1E-25 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_28780 106ffaa491dea98e8abe9d5c8ffdf20f 104 Gene3D G3DSA:1.10.10.10 2 103 1.9E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_28780 106ffaa491dea98e8abe9d5c8ffdf20f 104 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 56 72 7.6E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_28780 106ffaa491dea98e8abe9d5c8ffdf20f 104 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 72 84 7.6E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_28780 106ffaa491dea98e8abe9d5c8ffdf20f 104 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 42 56 7.6E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_81050 4204abc9f4f88a0a32991164740e7ea2 476 Gene3D G3DSA:3.30.460.10 21 158 4.3E-36 T 14-10-2018 AMIS_81050 4204abc9f4f88a0a32991164740e7ea2 476 Gene3D G3DSA:1.10.3090.10 159 457 3.7E-41 T 14-10-2018 AMIS_81050 4204abc9f4f88a0a32991164740e7ea2 476 Pfam PF01966 HD domain 262 380 7.6E-13 T 14-10-2018 IPR006674 HD domain AMIS_81050 4204abc9f4f88a0a32991164740e7ea2 476 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 188 246 1.7E-16 T 14-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AMIS_81050 4204abc9f4f88a0a32991164740e7ea2 476 Pfam PF01743 Poly A polymerase head domain 37 160 2.2E-32 T 14-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AMIS_81050 4204abc9f4f88a0a32991164740e7ea2 476 SMART SM00471 258 414 3.9E-5 T 14-10-2018 IPR003607 HD/PDEase domain AMIS_81050 4204abc9f4f88a0a32991164740e7ea2 476 TIGRFAM TIGR00277 HDIG: HDIG domain 259 337 2.5E-12 T 14-10-2018 IPR006675 HDIG domain AMIS_81050 4204abc9f4f88a0a32991164740e7ea2 476 TIGRFAM TIGR02692 tRNA_CCA_actino: CCA tRNA nucleotidyltransferase 9 468 1.3E-219 T 14-10-2018 IPR014065 tRNA adenylyltransferase AMIS_81050 4204abc9f4f88a0a32991164740e7ea2 476 SUPERFAMILY SSF81891 158 468 2.22E-60 T 14-10-2018 AMIS_81050 4204abc9f4f88a0a32991164740e7ea2 476 SUPERFAMILY SSF81301 19 157 1.31E-35 T 14-10-2018 AMIS_74410 e8585a7322646f4d562e9be2b02f044c 186 Pfam PF03703 Bacterial PH domain 78 152 6.5E-19 T 14-10-2018 IPR005182 Domain of unknown function DUF304 AMIS_75230 d18ec7cc858dd5bb33612ea15777e2ad 815 Gene3D G3DSA:3.90.550.10 375 593 3.9E-49 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_75230 d18ec7cc858dd5bb33612ea15777e2ad 815 SUPERFAMILY SSF53448 378 630 1.13E-59 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_75230 d18ec7cc858dd5bb33612ea15777e2ad 815 SUPERFAMILY SSF88713 86 285 2.1E-53 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AMIS_75230 d18ec7cc858dd5bb33612ea15777e2ad 815 Gene3D G3DSA:3.20.20.370 79 293 4.7E-60 T 14-10-2018 AMIS_75230 d18ec7cc858dd5bb33612ea15777e2ad 815 Pfam PF13641 Glycosyltransferase like family 2 383 602 7.0E-42 T 14-10-2018 AMIS_75230 d18ec7cc858dd5bb33612ea15777e2ad 815 Pfam PF01522 Polysaccharide deacetylase 88 208 6.4E-29 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMIS_23990 4f3d8c997c0cd399db3fea59a473967a 304 Gene3D G3DSA:3.40.190.290 92 295 6.6E-15 T 14-10-2018 AMIS_23990 4f3d8c997c0cd399db3fea59a473967a 304 SUPERFAMILY SSF53850 92 297 9.77E-19 T 14-10-2018 AMIS_23990 4f3d8c997c0cd399db3fea59a473967a 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 4.8E-22 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_23990 4f3d8c997c0cd399db3fea59a473967a 304 SUPERFAMILY SSF46785 2 83 2.8E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_23990 4f3d8c997c0cd399db3fea59a473967a 304 Pfam PF03466 LysR substrate binding domain 91 292 4.8E-19 T 14-10-2018 IPR005119 LysR, substrate-binding AMIS_23990 4f3d8c997c0cd399db3fea59a473967a 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 9.5E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_23990 4f3d8c997c0cd399db3fea59a473967a 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 9.5E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_23990 4f3d8c997c0cd399db3fea59a473967a 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 9.5E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_23990 4f3d8c997c0cd399db3fea59a473967a 304 Gene3D G3DSA:1.10.10.10 1 85 2.5E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_11050 8cee860712c157eed26cc84f1c9477ca 854 SUPERFAMILY SSF63737 8 205 4.05E-40 T 14-10-2018 AMIS_11050 8cee860712c157eed26cc84f1c9477ca 854 Pfam PF01433 Peptidase family M1 domain 218 450 6.7E-59 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMIS_11050 8cee860712c157eed26cc84f1c9477ca 854 Gene3D G3DSA:1.10.390.60 209 454 1.1E-70 T 14-10-2018 AMIS_11050 8cee860712c157eed26cc84f1c9477ca 854 TIGRFAM TIGR02412 pepN_strep_liv: aminopeptidase N 8 848 7.3E-294 T 14-10-2018 IPR012778 Peptidase M1, aminopeptidase GO:0004177|GO:0006508 KEGG: 00480+3.4.11.2 AMIS_11050 8cee860712c157eed26cc84f1c9477ca 854 Gene3D G3DSA:2.60.40.1730 14 206 5.7E-30 T 14-10-2018 AMIS_11050 8cee860712c157eed26cc84f1c9477ca 854 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 321 333 9.7E-22 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMIS_11050 8cee860712c157eed26cc84f1c9477ca 854 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 188 203 9.7E-22 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMIS_11050 8cee860712c157eed26cc84f1c9477ca 854 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 140 155 9.7E-22 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMIS_11050 8cee860712c157eed26cc84f1c9477ca 854 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 267 277 9.7E-22 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMIS_11050 8cee860712c157eed26cc84f1c9477ca 854 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 302 317 9.7E-22 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMIS_11050 8cee860712c157eed26cc84f1c9477ca 854 Pfam PF11838 ERAP1-like C-terminal domain 532 842 4.0E-50 T 14-10-2018 IPR024571 ERAP1-like C-terminal domain AMIS_11050 8cee860712c157eed26cc84f1c9477ca 854 SUPERFAMILY SSF55486 212 459 1.04E-68 T 14-10-2018 AMIS_40290 13231a716e330f21bcaa617f8a593455 488 Gene3D G3DSA:3.40.720.10 35 460 1.1E-91 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AMIS_40290 13231a716e330f21bcaa617f8a593455 488 Pfam PF00884 Sulfatase 37 373 3.6E-56 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 AMIS_40290 13231a716e330f21bcaa617f8a593455 488 PIRSF PIRSF036666 23 488 1.1E-86 T 14-10-2018 IPR012251 N-acetylglucosamine-6-sulfatase GO:0008449|GO:0030203 KEGG: 00531+3.1.6.14|Reactome: R-HSA-2022857|Reactome: R-HSA-2206305|Reactome: R-HSA-432720|Reactome: R-HSA-6798695 AMIS_40290 13231a716e330f21bcaa617f8a593455 488 ProSitePatterns PS00523 Sulfatases signature 1. 76 88 - T 14-10-2018 IPR024607 Sulfatase, conserved site AMIS_40290 13231a716e330f21bcaa617f8a593455 488 SUPERFAMILY SSF53649 36 482 2.04E-95 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AMIS_48400 5815d1cc935c69b94c6b57eca716ba90 330 Gene3D G3DSA:1.10.510.10 94 274 6.9E-44 T 14-10-2018 AMIS_48400 5815d1cc935c69b94c6b57eca716ba90 330 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 14 37 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 AMIS_48400 5815d1cc935c69b94c6b57eca716ba90 330 Gene3D G3DSA:3.30.200.20 1 93 9.5E-26 T 14-10-2018 AMIS_48400 5815d1cc935c69b94c6b57eca716ba90 330 SUPERFAMILY SSF56112 5 262 6.97E-68 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMIS_48400 5815d1cc935c69b94c6b57eca716ba90 330 Pfam PF00069 Protein kinase domain 8 259 2.1E-43 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMIS_48400 5815d1cc935c69b94c6b57eca716ba90 330 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 132 144 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 AMIS_48400 5815d1cc935c69b94c6b57eca716ba90 330 PIRSF PIRSF000654 16 266 2.6E-18 T 14-10-2018 AMIS_48400 5815d1cc935c69b94c6b57eca716ba90 330 SMART SM00220 8 270 6.4E-55 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMIS_9670 81c026f520dc48ee7ed1a81e42b04faa 182 Gene3D G3DSA:1.10.1740.10 1 91 7.4E-31 T 14-10-2018 AMIS_9670 81c026f520dc48ee7ed1a81e42b04faa 182 SUPERFAMILY SSF88946 7 113 1.12E-24 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_9670 81c026f520dc48ee7ed1a81e42b04faa 182 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 50 81 - T 14-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_9670 81c026f520dc48ee7ed1a81e42b04faa 182 Pfam PF08281 Sigma-70, region 4 124 172 7.4E-13 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_9670 81c026f520dc48ee7ed1a81e42b04faa 182 Pfam PF04542 Sigma-70 region 2 34 92 1.7E-13 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_9670 81c026f520dc48ee7ed1a81e42b04faa 182 SUPERFAMILY SSF88659 122 174 6.54E-12 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_9670 81c026f520dc48ee7ed1a81e42b04faa 182 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 25 173 2.0E-18 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_9670 81c026f520dc48ee7ed1a81e42b04faa 182 Gene3D G3DSA:1.10.10.10 118 179 7.4E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_39290 45aa0abfcabbea837b782646176c5714 1743 ProSitePatterns PS00622 LuxR-type HTH domain signature. 875 902 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_39290 45aa0abfcabbea837b782646176c5714 1743 Pfam PF13191 AAA ATPase domain 11 168 1.6E-15 T 14-10-2018 AMIS_39290 45aa0abfcabbea837b782646176c5714 1743 SUPERFAMILY SSF52540 11 234 2.05E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_39290 45aa0abfcabbea837b782646176c5714 1743 SUPERFAMILY SSF46894 859 913 4.08E-15 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_39290 45aa0abfcabbea837b782646176c5714 1743 Gene3D G3DSA:1.10.10.10 768 922 2.0E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_39290 45aa0abfcabbea837b782646176c5714 1743 SMART SM00421 858 915 4.3E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_39290 45aa0abfcabbea837b782646176c5714 1743 Pfam PF00196 Bacterial regulatory proteins, luxR family 861 911 1.1E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_39290 45aa0abfcabbea837b782646176c5714 1743 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 891 903 3.9E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_39290 45aa0abfcabbea837b782646176c5714 1743 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 875 891 3.9E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_39290 45aa0abfcabbea837b782646176c5714 1743 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 861 875 3.9E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_18800 c42c2c360cefb0058f02c169b3d3edeb 387 SUPERFAMILY SSF48179 189 264 1.87E-11 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMIS_18800 c42c2c360cefb0058f02c169b3d3edeb 387 Gene3D G3DSA:3.40.50.720 189 382 6.0E-29 T 14-10-2018 AMIS_18800 c42c2c360cefb0058f02c169b3d3edeb 387 Gene3D G3DSA:3.40.50.720 1 186 3.6E-53 T 14-10-2018 AMIS_18800 c42c2c360cefb0058f02c169b3d3edeb 387 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3 169 1.8E-34 T 14-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AMIS_18800 c42c2c360cefb0058f02c169b3d3edeb 387 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 300 372 8.8E-10 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AMIS_18800 c42c2c360cefb0058f02c169b3d3edeb 387 PIRSF PIRSF000124 1 380 2.5E-55 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AMIS_18800 c42c2c360cefb0058f02c169b3d3edeb 387 SUPERFAMILY SSF52413 292 380 1.96E-15 T 14-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 AMIS_18800 c42c2c360cefb0058f02c169b3d3edeb 387 PIRSF PIRSF500136 1 381 2.3E-69 T 14-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 AMIS_18800 c42c2c360cefb0058f02c169b3d3edeb 387 SUPERFAMILY SSF51735 2 183 4.16E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_18800 c42c2c360cefb0058f02c169b3d3edeb 387 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 2 371 6.4E-77 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AMIS_18800 c42c2c360cefb0058f02c169b3d3edeb 387 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 189 264 4.3E-10 T 14-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AMIS_18800 c42c2c360cefb0058f02c169b3d3edeb 387 SMART SM00984 299 383 1.3E-12 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AMIS_4430 1ba40019f6bc995e819f11917df4da7a 338 TIGRFAM TIGR03586 PseI: pseudaminic acid synthase 5 333 2.2E-138 T 14-10-2018 IPR020030 Pseudaminic acid biosynthesis, PseI KEGG: 00520+2.5.1.97|MetaCyc: PWY-6143 AMIS_4430 1ba40019f6bc995e819f11917df4da7a 338 SUPERFAMILY SSF51269 277 338 1.88E-13 T 14-10-2018 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily Reactome: R-HSA-4085001 AMIS_4430 1ba40019f6bc995e819f11917df4da7a 338 Gene3D G3DSA:3.20.20.70 1 286 1.9E-99 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_4430 1ba40019f6bc995e819f11917df4da7a 338 Gene3D G3DSA:3.90.1210.10 287 338 1.8E-13 T 14-10-2018 AMIS_4430 1ba40019f6bc995e819f11917df4da7a 338 SUPERFAMILY SSF51569 3 289 7.94E-84 T 14-10-2018 AMIS_4430 1ba40019f6bc995e819f11917df4da7a 338 SMART SM00858 281 338 5.6E-6 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AMIS_4430 1ba40019f6bc995e819f11917df4da7a 338 Pfam PF08666 SAF domain 282 337 1.3E-7 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AMIS_4430 1ba40019f6bc995e819f11917df4da7a 338 Pfam PF03102 NeuB family 26 265 7.4E-88 T 14-10-2018 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 Reactome: R-HSA-4085001 AMIS_80330 15076d6a909e830633227200a21fcd25 174 SUPERFAMILY SSF50475 26 172 2.88E-20 T 14-10-2018 AMIS_80330 15076d6a909e830633227200a21fcd25 174 SMART SM00903 30 172 9.3E-16 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 AMIS_80330 15076d6a909e830633227200a21fcd25 174 Gene3D G3DSA:2.30.110.10 17 174 6.6E-22 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AMIS_80330 15076d6a909e830633227200a21fcd25 174 Pfam PF01613 Flavin reductase like domain 31 173 6.1E-17 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 AMIS_45870 a46e6e9ccb855a9e2be4f60454572eab 913 Gene3D G3DSA:3.40.50.300 2 142 1.1E-5 T 14-10-2018 AMIS_45870 a46e6e9ccb855a9e2be4f60454572eab 913 SUPERFAMILY SSF52540 3 189 7.11E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_45870 a46e6e9ccb855a9e2be4f60454572eab 913 Pfam PF13191 AAA ATPase domain 3 136 3.6E-14 T 14-10-2018 AMIS_28640 d89d085ba088e8c2e1e8b0a64df42475 246 Gene3D G3DSA:3.40.50.720 2 246 1.6E-30 T 14-10-2018 AMIS_28640 d89d085ba088e8c2e1e8b0a64df42475 246 SUPERFAMILY SSF51735 1 218 9.36E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_28640 d89d085ba088e8c2e1e8b0a64df42475 246 Pfam PF13460 NAD(P)H-binding 7 134 1.0E-9 T 14-10-2018 IPR016040 NAD(P)-binding domain AMIS_55020 3ed3ba5c093613ce26aeb4564ea282a6 338 SUPERFAMILY SSF53822 64 336 3.73E-66 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_55020 3ed3ba5c093613ce26aeb4564ea282a6 338 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 14-10-2018 AMIS_55020 3ed3ba5c093613ce26aeb4564ea282a6 338 SUPERFAMILY SSF47413 2 58 5.63E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_55020 3ed3ba5c093613ce26aeb4564ea282a6 338 Gene3D G3DSA:1.10.260.40 1 61 1.9E-22 T 14-10-2018 AMIS_55020 3ed3ba5c093613ce26aeb4564ea282a6 338 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 2.6E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_55020 3ed3ba5c093613ce26aeb4564ea282a6 338 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 2.6E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_55020 3ed3ba5c093613ce26aeb4564ea282a6 338 SMART SM00354 2 73 3.4E-27 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_55020 3ed3ba5c093613ce26aeb4564ea282a6 338 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 50 4.5E-19 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_55020 3ed3ba5c093613ce26aeb4564ea282a6 338 Gene3D G3DSA:3.40.50.2300 64 311 7.8E-70 T 14-10-2018 AMIS_55020 3ed3ba5c093613ce26aeb4564ea282a6 338 Gene3D G3DSA:3.40.50.2300 168 297 7.8E-70 T 14-10-2018 AMIS_55020 3ed3ba5c093613ce26aeb4564ea282a6 338 Pfam PF13377 Periplasmic binding protein-like domain 180 333 6.2E-34 T 14-10-2018 AMIS_15010 054047a0dc5a47d654ba45557d843f25 577 Pfam PF00817 impB/mucB/samB family 28 152 8.9E-14 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AMIS_15010 054047a0dc5a47d654ba45557d843f25 577 SUPERFAMILY SSF56672 8 226 9.78E-38 T 14-10-2018 AMIS_15010 054047a0dc5a47d654ba45557d843f25 577 Gene3D G3DSA:2.30.40.20 34 72 1.1E-17 T 14-10-2018 AMIS_15010 054047a0dc5a47d654ba45557d843f25 577 Gene3D G3DSA:1.10.150.20 169 219 1.1E-17 T 14-10-2018 AMIS_15010 054047a0dc5a47d654ba45557d843f25 577 Gene3D G3DSA:3.30.70.270 73 225 1.1E-17 T 14-10-2018 AMIS_53880 96cb1ba5f96273075b89161873074222 390 SUPERFAMILY SSF55874 273 390 1.22E-15 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_53880 96cb1ba5f96273075b89161873074222 390 Pfam PF07730 Histidine kinase 189 253 2.6E-14 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMIS_53880 96cb1ba5f96273075b89161873074222 390 Gene3D G3DSA:3.30.565.10 268 390 1.6E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_62970 a261703bff66ff0c9b3c9819a3ea834c 304 Pfam PF03747 ADP-ribosylglycohydrolase 18 285 6.2E-46 T 14-10-2018 IPR005502 ADP-ribosylation/Crystallin J1 AMIS_62970 a261703bff66ff0c9b3c9819a3ea834c 304 SUPERFAMILY SSF101478 17 290 2.88E-49 T 14-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily AMIS_62970 a261703bff66ff0c9b3c9819a3ea834c 304 Gene3D G3DSA:1.10.4080.10 15 295 8.8E-55 T 14-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily AMIS_43700 aef4efbaacef507ae46cd9f8b065094b 1029 PIRSF PIRSF010631 4 1027 5.1E-230 T 14-10-2018 IPR016007 Alpha-L-rhamnosidase AMIS_43700 aef4efbaacef507ae46cd9f8b065094b 1029 SUPERFAMILY SSF48208 612 1011 9.83E-35 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AMIS_43700 aef4efbaacef507ae46cd9f8b065094b 1029 Pfam PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain 944 1016 1.4E-15 T 14-10-2018 IPR035398 Alpha-L-rhamnosidase C-terminal domain AMIS_43700 aef4efbaacef507ae46cd9f8b065094b 1029 Pfam PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain 512 596 6.6E-17 T 14-10-2018 IPR008902 Alpha-L-rhamnosidase, concanavalin-like domain AMIS_43700 aef4efbaacef507ae46cd9f8b065094b 1029 Gene3D G3DSA:1.50.10.10 309 1029 2.9E-205 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 AMIS_43700 aef4efbaacef507ae46cd9f8b065094b 1029 Pfam PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain 611 941 1.1E-79 T 14-10-2018 IPR035396 Alpha-L-rhamnosidase, six-hairpin glycosidase domain AMIS_43700 aef4efbaacef507ae46cd9f8b065094b 1029 Gene3D G3DSA:2.60.40.10 30 132 4.7E-27 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_43700 aef4efbaacef507ae46cd9f8b065094b 1029 Pfam PF08531 Alpha-L-rhamnosidase N-terminal domain 344 481 2.1E-43 T 14-10-2018 IPR013737 Bacterial alpha-L-rhamnosidase N-terminal AMIS_11580 d7cf71ab456484789422b79036a28d95 244 SMART SM00278 191 210 0.013 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AMIS_11580 d7cf71ab456484789422b79036a28d95 244 SMART SM00278 221 240 73.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AMIS_11580 d7cf71ab456484789422b79036a28d95 244 Pfam PF12836 Helix-hairpin-helix motif 181 242 7.9E-20 T 14-10-2018 AMIS_11580 d7cf71ab456484789422b79036a28d95 244 Gene3D G3DSA:3.10.560.10 99 166 3.2E-5 T 14-10-2018 AMIS_11580 d7cf71ab456484789422b79036a28d95 244 Pfam PF10531 SLBB domain 106 156 8.9E-10 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_11580 d7cf71ab456484789422b79036a28d95 244 Gene3D G3DSA:1.10.150.320 173 242 2.5E-19 T 14-10-2018 AMIS_11580 d7cf71ab456484789422b79036a28d95 244 SUPERFAMILY SSF47781 170 244 1.89E-25 T 14-10-2018 IPR010994 RuvA domain 2-like AMIS_47310 56b4f167fe6ed83063905ad13ad558e5 689 PRINTS PR00344 Bacterial sensor protein C-terminal signature 604 618 1.0E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_47310 56b4f167fe6ed83063905ad13ad558e5 689 PRINTS PR00344 Bacterial sensor protein C-terminal signature 637 655 1.0E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_47310 56b4f167fe6ed83063905ad13ad558e5 689 PRINTS PR00344 Bacterial sensor protein C-terminal signature 661 674 1.0E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_47310 56b4f167fe6ed83063905ad13ad558e5 689 SMART SM00091 324 393 0.003 T 14-10-2018 IPR000014 PAS domain AMIS_47310 56b4f167fe6ed83063905ad13ad558e5 689 Gene3D G3DSA:3.30.450.20 312 452 6.7E-13 T 14-10-2018 AMIS_47310 56b4f167fe6ed83063905ad13ad558e5 689 Pfam PF05231 MASE1 12 310 6.6E-9 T 14-10-2018 IPR007895 MASE1 AMIS_47310 56b4f167fe6ed83063905ad13ad558e5 689 SUPERFAMILY SSF55874 517 677 3.41E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_47310 56b4f167fe6ed83063905ad13ad558e5 689 SMART SM00388 449 521 7.3E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_47310 56b4f167fe6ed83063905ad13ad558e5 689 Pfam PF13188 PAS domain 324 366 1.2E-4 T 14-10-2018 IPR000014 PAS domain AMIS_47310 56b4f167fe6ed83063905ad13ad558e5 689 Gene3D G3DSA:3.30.565.10 519 674 2.7E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_47310 56b4f167fe6ed83063905ad13ad558e5 689 SUPERFAMILY SSF47384 434 516 4.32E-9 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_47310 56b4f167fe6ed83063905ad13ad558e5 689 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 566 675 5.2E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_47310 56b4f167fe6ed83063905ad13ad558e5 689 SMART SM00387 565 677 9.1E-35 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_47310 56b4f167fe6ed83063905ad13ad558e5 689 Gene3D G3DSA:1.10.287.130 453 518 2.7E-45 T 14-10-2018 AMIS_47310 56b4f167fe6ed83063905ad13ad558e5 689 Pfam PF00512 His Kinase A (phospho-acceptor) domain 450 518 9.0E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_47310 56b4f167fe6ed83063905ad13ad558e5 689 SUPERFAMILY SSF55785 311 441 1.24E-10 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_66140 7065516b887c587d8a5c4146d724d259 618 Pfam PF00664 ABC transporter transmembrane region 18 287 2.5E-44 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AMIS_66140 7065516b887c587d8a5c4146d724d259 618 ProSitePatterns PS00211 ABC transporters family signature. 477 491 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_66140 7065516b887c587d8a5c4146d724d259 618 Pfam PF00005 ABC transporter 357 503 1.9E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_66140 7065516b887c587d8a5c4146d724d259 618 SUPERFAMILY SSF52540 558 609 1.21E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_66140 7065516b887c587d8a5c4146d724d259 618 SMART SM00382 365 585 1.4E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_66140 7065516b887c587d8a5c4146d724d259 618 Gene3D G3DSA:1.20.1560.10 2 315 8.2E-82 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMIS_66140 7065516b887c587d8a5c4146d724d259 618 SUPERFAMILY SSF52540 330 535 9.02E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_66140 7065516b887c587d8a5c4146d724d259 618 SUPERFAMILY SSF90123 6 314 8.63E-73 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMIS_39580 7c7f031b5b7db91b23f4830f86d03244 508 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 424 507 3.5E-33 T 14-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 AMIS_39580 7c7f031b5b7db91b23f4830f86d03244 508 SUPERFAMILY SSF52283 1 165 9.35E-51 T 14-10-2018 AMIS_39580 7c7f031b5b7db91b23f4830f86d03244 508 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 138 365 1.5E-66 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AMIS_39580 7c7f031b5b7db91b23f4830f86d03244 508 SUPERFAMILY SSF51735 134 314 3.63E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_39580 7c7f031b5b7db91b23f4830f86d03244 508 PIRSF PIRSF000203 1 507 3.5E-224 T 14-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 AMIS_39580 7c7f031b5b7db91b23f4830f86d03244 508 Gene3D G3DSA:3.40.50.720 134 315 1.6E-142 T 14-10-2018 AMIS_39580 7c7f031b5b7db91b23f4830f86d03244 508 Gene3D G3DSA:3.40.50.720 3 362 1.6E-142 T 14-10-2018 AMIS_39580 7c7f031b5b7db91b23f4830f86d03244 508 SMART SM01003 4 134 7.9E-62 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AMIS_39580 7c7f031b5b7db91b23f4830f86d03244 508 SMART SM01002 143 308 4.6E-69 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AMIS_39580 7c7f031b5b7db91b23f4830f86d03244 508 TIGRFAM TIGR00561 pntA: NAD(P)(+) transhydrogenase (AB-specific), alpha subunit 3 507 3.0E-211 T 14-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 AMIS_39580 7c7f031b5b7db91b23f4830f86d03244 508 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 134 1.9E-40 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AMIS_81110 621a0d22fe8de45a28fd996ffbcf6745 319 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 302 2.1E-48 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMIS_81110 621a0d22fe8de45a28fd996ffbcf6745 319 Gene3D G3DSA:3.50.50.60 8 312 3.2E-118 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_81110 621a0d22fe8de45a28fd996ffbcf6745 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 112 130 5.5E-37 T 14-10-2018 AMIS_81110 621a0d22fe8de45a28fd996ffbcf6745 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 5.5E-37 T 14-10-2018 AMIS_81110 621a0d22fe8de45a28fd996ffbcf6745 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 154 172 5.5E-37 T 14-10-2018 AMIS_81110 621a0d22fe8de45a28fd996ffbcf6745 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 239 255 5.5E-37 T 14-10-2018 AMIS_81110 621a0d22fe8de45a28fd996ffbcf6745 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 5.5E-37 T 14-10-2018 AMIS_81110 621a0d22fe8de45a28fd996ffbcf6745 319 Gene3D G3DSA:3.50.50.60 129 252 3.2E-118 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_81110 621a0d22fe8de45a28fd996ffbcf6745 319 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 142 162 - T 14-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 AMIS_81110 621a0d22fe8de45a28fd996ffbcf6745 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 2.1E-79 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMIS_81110 621a0d22fe8de45a28fd996ffbcf6745 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 135 147 2.1E-79 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMIS_81110 621a0d22fe8de45a28fd996ffbcf6745 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 202 218 2.1E-79 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMIS_81110 621a0d22fe8de45a28fd996ffbcf6745 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 150 174 2.1E-79 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMIS_81110 621a0d22fe8de45a28fd996ffbcf6745 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 6 28 2.1E-79 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMIS_81110 621a0d22fe8de45a28fd996ffbcf6745 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 113 121 2.1E-79 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMIS_81110 621a0d22fe8de45a28fd996ffbcf6745 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 241 262 2.1E-79 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMIS_81110 621a0d22fe8de45a28fd996ffbcf6745 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 39 54 2.1E-79 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMIS_81110 621a0d22fe8de45a28fd996ffbcf6745 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 60 70 2.1E-79 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMIS_81110 621a0d22fe8de45a28fd996ffbcf6745 319 SUPERFAMILY SSF51905 6 311 9.37E-57 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_81110 621a0d22fe8de45a28fd996ffbcf6745 319 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 6 313 6.6E-122 T 14-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 AMIS_25530 536b0d1c72cf53f3c59fcf51577b250d 338 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 136 3.0E-23 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMIS_25530 536b0d1c72cf53f3c59fcf51577b250d 338 Pfam PF00107 Zinc-binding dehydrogenase 179 293 1.1E-11 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMIS_25530 536b0d1c72cf53f3c59fcf51577b250d 338 Gene3D G3DSA:3.40.50.720 156 279 9.9E-72 T 14-10-2018 AMIS_25530 536b0d1c72cf53f3c59fcf51577b250d 338 SUPERFAMILY SSF50129 1 177 6.7E-42 T 14-10-2018 IPR011032 GroES-like superfamily AMIS_25530 536b0d1c72cf53f3c59fcf51577b250d 338 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 63 77 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AMIS_25530 536b0d1c72cf53f3c59fcf51577b250d 338 Gene3D G3DSA:3.90.180.10 14 314 9.9E-72 T 14-10-2018 AMIS_25530 536b0d1c72cf53f3c59fcf51577b250d 338 SUPERFAMILY SSF51735 146 302 8.78E-25 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_17900 f35973724055d274511343a3c1fa8a8e 847 Pfam PF00196 Bacterial regulatory proteins, luxR family 786 841 1.5E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_17900 f35973724055d274511343a3c1fa8a8e 847 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 787 801 8.9E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_17900 f35973724055d274511343a3c1fa8a8e 847 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 801 817 8.9E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_17900 f35973724055d274511343a3c1fa8a8e 847 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 817 829 8.9E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_17900 f35973724055d274511343a3c1fa8a8e 847 Gene3D G3DSA:1.10.10.10 783 847 1.0E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_17900 f35973724055d274511343a3c1fa8a8e 847 SMART SM00421 784 841 1.1E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_17900 f35973724055d274511343a3c1fa8a8e 847 Gene3D G3DSA:1.25.40.10 419 765 1.5E-30 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_17900 f35973724055d274511343a3c1fa8a8e 847 SUPERFAMILY SSF46894 780 847 1.29E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_17900 f35973724055d274511343a3c1fa8a8e 847 SUPERFAMILY SSF52540 16 151 1.96E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_17900 f35973724055d274511343a3c1fa8a8e 847 SUPERFAMILY SSF48452 466 585 5.22E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_23380 1998ade991ca2a8397ac8df6825bf91c 219 ProSitePatterns PS00622 LuxR-type HTH domain signature. 168 195 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_23380 1998ade991ca2a8397ac8df6825bf91c 219 Pfam PF00196 Bacterial regulatory proteins, luxR family 154 208 1.0E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_23380 1998ade991ca2a8397ac8df6825bf91c 219 Gene3D G3DSA:3.40.50.12740 2 214 1.0E-69 T 14-10-2018 AMIS_23380 1998ade991ca2a8397ac8df6825bf91c 219 SUPERFAMILY SSF52172 1 134 1.11E-32 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_23380 1998ade991ca2a8397ac8df6825bf91c 219 Pfam PF00072 Response regulator receiver domain 4 116 1.5E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_23380 1998ade991ca2a8397ac8df6825bf91c 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 7.2E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_23380 1998ade991ca2a8397ac8df6825bf91c 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 7.2E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_23380 1998ade991ca2a8397ac8df6825bf91c 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 7.2E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_23380 1998ade991ca2a8397ac8df6825bf91c 219 SUPERFAMILY SSF46894 139 214 3.4E-22 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_23380 1998ade991ca2a8397ac8df6825bf91c 219 SMART SM00448 2 115 5.0E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_23380 1998ade991ca2a8397ac8df6825bf91c 219 SMART SM00421 151 208 8.9E-27 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_23360 99a979ed5d628107795989651756898e 305 Gene3D G3DSA:3.20.20.140 5 230 4.6E-36 T 14-10-2018 AMIS_23360 99a979ed5d628107795989651756898e 305 SMART SM00481 18 84 3.6E-7 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal AMIS_23360 99a979ed5d628107795989651756898e 305 SUPERFAMILY SSF89550 15 229 2.62E-31 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AMIS_7980 02d3d77bdfcc0dce5a7853a57716aaea 148 Gene3D G3DSA:3.30.428.10 1 137 1.6E-30 T 14-10-2018 IPR036265 HIT-like superfamily AMIS_7980 02d3d77bdfcc0dce5a7853a57716aaea 148 PRINTS PR00332 Histidine triad family signature 5 21 1.5E-11 T 14-10-2018 IPR001310 Histidine triad (HIT) protein AMIS_7980 02d3d77bdfcc0dce5a7853a57716aaea 148 PRINTS PR00332 Histidine triad family signature 26 44 1.5E-11 T 14-10-2018 IPR001310 Histidine triad (HIT) protein AMIS_7980 02d3d77bdfcc0dce5a7853a57716aaea 148 PRINTS PR00332 Histidine triad family signature 91 101 1.5E-11 T 14-10-2018 IPR001310 Histidine triad (HIT) protein AMIS_7980 02d3d77bdfcc0dce5a7853a57716aaea 148 SUPERFAMILY SSF54197 3 132 2.13E-32 T 14-10-2018 IPR036265 HIT-like superfamily AMIS_7980 02d3d77bdfcc0dce5a7853a57716aaea 148 Pfam PF01230 HIT domain 14 105 1.3E-17 T 14-10-2018 IPR001310 Histidine triad (HIT) protein AMIS_7980 02d3d77bdfcc0dce5a7853a57716aaea 148 ProSitePatterns PS00892 HIT domain signature. 84 102 - T 14-10-2018 IPR019808 Histidine triad, conserved site AMIS_44410 4ff0dcbde3a5caf930e090f443454b38 401 TIGRFAM TIGR01412 tat_substr_1: Tat-translocated enzyme 2 400 6.7E-151 T 14-10-2018 IPR006313 Deferrochelatase/peroxidase EfeB GO:0004601|GO:0015684|GO:0020037|GO:0033212 AMIS_44410 4ff0dcbde3a5caf930e090f443454b38 401 SUPERFAMILY SSF54909 39 391 1.79E-90 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel AMIS_44410 4ff0dcbde3a5caf930e090f443454b38 401 Pfam PF04261 Dyp-type peroxidase family 44 387 1.8E-107 T 14-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 AMIS_44410 4ff0dcbde3a5caf930e090f443454b38 401 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 44 387 8.7E-97 T 14-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 AMIS_19010 123f98136ff4b4f1807525498420ffb8 142 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 1 142 7.8E-18 T 14-10-2018 IPR019587 Polyketide cyclase/dehydrase AMIS_19010 123f98136ff4b4f1807525498420ffb8 142 Gene3D G3DSA:3.30.530.20 2 142 3.0E-21 T 14-10-2018 IPR023393 START-like domain superfamily AMIS_19010 123f98136ff4b4f1807525498420ffb8 142 SUPERFAMILY SSF55961 1 136 8.94E-22 T 14-10-2018 AMIS_26870 c52d9f5f23fb581b2e9c3e39aca16192 227 Pfam PF00005 ABC transporter 22 170 9.8E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_26870 c52d9f5f23fb581b2e9c3e39aca16192 227 SUPERFAMILY SSF52540 7 219 6.93E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_26870 c52d9f5f23fb581b2e9c3e39aca16192 227 SMART SM00382 31 219 2.1E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_26870 c52d9f5f23fb581b2e9c3e39aca16192 227 Gene3D G3DSA:3.40.50.300 5 223 1.1E-63 T 14-10-2018 AMIS_36450 048f18c184947d17371b4fc74f24291f 227 Pfam PF10708 Protein of unknown function (DUF2510) 12 44 6.4E-12 T 14-10-2018 IPR018929 Domain of unknown function DUF2510 AMIS_67070 a294c9f08a2114fe41ad1280e916e812 538 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 293 305 2.0E-19 T 14-10-2018 AMIS_67070 a294c9f08a2114fe41ad1280e916e812 538 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 193 209 2.0E-19 T 14-10-2018 AMIS_67070 a294c9f08a2114fe41ad1280e916e812 538 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 325 349 2.0E-19 T 14-10-2018 AMIS_67070 a294c9f08a2114fe41ad1280e916e812 538 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 216 230 2.0E-19 T 14-10-2018 AMIS_67070 a294c9f08a2114fe41ad1280e916e812 538 Pfam PF12161 HsdM N-terminal domain 23 156 9.1E-28 T 14-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain AMIS_67070 a294c9f08a2114fe41ad1280e916e812 538 Pfam PF02384 N-6 DNA Methylase 169 497 6.2E-113 T 14-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 AMIS_67070 a294c9f08a2114fe41ad1280e916e812 538 SUPERFAMILY SSF53335 21 536 3.81E-138 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_67070 a294c9f08a2114fe41ad1280e916e812 538 Gene3D G3DSA:3.40.50.150 170 481 7.2E-116 T 14-10-2018 AMIS_67070 a294c9f08a2114fe41ad1280e916e812 538 Gene3D G3DSA:1.20.1260.30 16 159 1.2E-46 T 14-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily AMIS_77700 0751152922cfbab114e14f00df6e107e 118 Pfam PF11774 Lsr2 2 111 2.4E-37 T 14-10-2018 IPR024412 Lsr2 AMIS_77700 0751152922cfbab114e14f00df6e107e 118 Gene3D G3DSA:3.30.60.230 1 59 8.4E-23 T 14-10-2018 AMIS_77700 0751152922cfbab114e14f00df6e107e 118 Gene3D G3DSA:1.20.890.50 80 115 3.6E-14 T 14-10-2018 AMIS_77700 0751152922cfbab114e14f00df6e107e 118 ProDom PD026347 LSR2-LIKE LSR2 ANTIGEN IMMUNE PRECURSOR RESPONSE SIGNAL PLASMID LYSYL GP61 1 110 1.0E-20 T 14-10-2018 IPR024412 Lsr2 AMIS_40090 4a15433fec9fabad21e47e27e4c4168f 280 Pfam PF00561 alpha/beta hydrolase fold 21 256 6.2E-20 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_40090 4a15433fec9fabad21e47e27e4c4168f 280 SUPERFAMILY SSF53474 4 275 4.68E-51 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_40090 4a15433fec9fabad21e47e27e4c4168f 280 Gene3D G3DSA:3.40.50.1820 4 276 4.7E-53 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_40090 4a15433fec9fabad21e47e27e4c4168f 280 PRINTS PR00111 Alpha/beta hydrolase fold signature 46 61 5.6E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_40090 4a15433fec9fabad21e47e27e4c4168f 280 PRINTS PR00111 Alpha/beta hydrolase fold signature 92 105 5.6E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_40090 4a15433fec9fabad21e47e27e4c4168f 280 PRINTS PR00111 Alpha/beta hydrolase fold signature 106 119 5.6E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_40090 4a15433fec9fabad21e47e27e4c4168f 280 PRINTS PR00111 Alpha/beta hydrolase fold signature 220 234 5.6E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_59090 16e4a9edb997082cdbeefbef14d2d636 221 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 8 178 2.4E-14 T 14-10-2018 AMIS_59090 16e4a9edb997082cdbeefbef14d2d636 221 Pfam PF12710 haloacid dehalogenase-like hydrolase 9 176 1.1E-15 T 14-10-2018 AMIS_59090 16e4a9edb997082cdbeefbef14d2d636 221 SUPERFAMILY SSF56784 8 207 1.9E-26 T 14-10-2018 IPR036412 HAD-like superfamily AMIS_59090 16e4a9edb997082cdbeefbef14d2d636 221 Gene3D G3DSA:3.40.50.1000 2 212 2.0E-42 T 14-10-2018 IPR023214 HAD superfamily AMIS_42950 427445a319a93454dea2a8c01cd25732 398 Pfam PF04209 homogentisate 1,2-dioxygenase 116 380 4.9E-18 T 14-10-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 AMIS_42950 427445a319a93454dea2a8c01cd25732 398 Gene3D G3DSA:2.60.120.10 91 183 6.9E-11 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMIS_42950 427445a319a93454dea2a8c01cd25732 398 SUPERFAMILY SSF51182 6 393 1.44E-92 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily AMIS_42950 427445a319a93454dea2a8c01cd25732 398 Gene3D G3DSA:2.60.120.10 278 373 8.8E-9 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMIS_46840 c6515290e35383d173eaf9474b519a44 301 SUPERFAMILY SSF46689 73 136 4.34E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_46840 c6515290e35383d173eaf9474b519a44 301 Gene3D G3DSA:1.10.10.60 76 138 4.7E-25 T 14-10-2018 AMIS_46840 c6515290e35383d173eaf9474b519a44 301 Gene3D G3DSA:1.10.357.10 140 296 3.4E-37 T 14-10-2018 AMIS_46840 c6515290e35383d173eaf9474b519a44 301 SUPERFAMILY SSF46785 3 72 4.44E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_46840 c6515290e35383d173eaf9474b519a44 301 SMART SM00345 9 68 5.3E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_46840 c6515290e35383d173eaf9474b519a44 301 SUPERFAMILY SSF48498 150 297 3.34E-21 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_46840 c6515290e35383d173eaf9474b519a44 301 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 68 7.7E-12 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_46840 c6515290e35383d173eaf9474b519a44 301 Gene3D G3DSA:1.10.10.10 6 75 4.5E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_46840 c6515290e35383d173eaf9474b519a44 301 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 147 293 8.2E-18 T 14-10-2018 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 AMIS_75830 0658dba130884661da4c544ce14118ca 246 SUPERFAMILY SSF46785 23 95 4.08E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_75830 0658dba130884661da4c544ce14118ca 246 SMART SM00881 95 196 3.4E-21 T 14-10-2018 IPR003781 CoA-binding GO:0048037 AMIS_75830 0658dba130884661da4c544ce14118ca 246 Hamap MF_01131 Redox-sensing transcriptional repressor Rex [rex]. 17 225 34.324 T 14-10-2018 IPR022876 Redox-sensing transcriptional repressor Rex GO:0005737|GO:0045892|GO:0051775 AMIS_75830 0658dba130884661da4c544ce14118ca 246 Pfam PF02629 CoA binding domain 97 195 1.1E-20 T 14-10-2018 IPR003781 CoA-binding GO:0048037 AMIS_75830 0658dba130884661da4c544ce14118ca 246 Gene3D G3DSA:1.10.10.10 21 92 6.1E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_75830 0658dba130884661da4c544ce14118ca 246 Pfam PF06971 Putative DNA-binding protein N-terminus 22 69 3.6E-18 T 14-10-2018 IPR009718 Rex DNA-binding, C-terminal domain GO:0005737|GO:0045892|GO:0051775 AMIS_75830 0658dba130884661da4c544ce14118ca 246 SUPERFAMILY SSF51735 98 220 4.8E-28 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_75830 0658dba130884661da4c544ce14118ca 246 Gene3D G3DSA:3.40.50.720 93 224 3.6E-47 T 14-10-2018 AMIS_24550 8b885978e8a768554cd5537747bee1fd 745 Pfam PF00931 NB-ARC domain 117 351 3.6E-11 T 14-10-2018 IPR002182 NB-ARC GO:0043531 Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-6798695|Reactome: R-HSA-6803207|Reactome: R-HSA-8953750 AMIS_24550 8b885978e8a768554cd5537747bee1fd 745 SMART SM00382 114 354 9.8E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_24550 8b885978e8a768554cd5537747bee1fd 745 PRINTS PR00364 Disease resistance protein signature 279 293 4.5E-11 T 14-10-2018 AMIS_24550 8b885978e8a768554cd5537747bee1fd 745 PRINTS PR00364 Disease resistance protein signature 194 208 4.5E-11 T 14-10-2018 AMIS_24550 8b885978e8a768554cd5537747bee1fd 745 PRINTS PR00364 Disease resistance protein signature 117 132 4.5E-11 T 14-10-2018 AMIS_24550 8b885978e8a768554cd5537747bee1fd 745 SUPERFAMILY SSF47413 3 60 6.97E-13 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_24550 8b885978e8a768554cd5537747bee1fd 745 Pfam PF13560 Helix-turn-helix domain 3 65 1.6E-14 T 14-10-2018 AMIS_24550 8b885978e8a768554cd5537747bee1fd 745 SMART SM00530 7 63 2.5E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMIS_24550 8b885978e8a768554cd5537747bee1fd 745 Gene3D G3DSA:1.25.40.10 475 689 6.8E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_24550 8b885978e8a768554cd5537747bee1fd 745 Gene3D G3DSA:1.10.260.40 2 65 3.3E-15 T 14-10-2018 AMIS_24550 8b885978e8a768554cd5537747bee1fd 745 SUPERFAMILY SSF52540 80 346 1.58E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_24550 8b885978e8a768554cd5537747bee1fd 745 Gene3D G3DSA:3.40.50.300 82 237 3.5E-26 T 14-10-2018 AMIS_24550 8b885978e8a768554cd5537747bee1fd 745 SUPERFAMILY SSF48452 544 723 4.17E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_47710 6123d5a7458846d18af7e7a74d0b6292 221 Gene3D G3DSA:3.40.50.12740 5 214 6.2E-71 T 14-10-2018 AMIS_47710 6123d5a7458846d18af7e7a74d0b6292 221 Pfam PF00072 Response regulator receiver domain 6 116 6.6E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_47710 6123d5a7458846d18af7e7a74d0b6292 221 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 208 1.6E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_47710 6123d5a7458846d18af7e7a74d0b6292 221 SUPERFAMILY SSF52172 1 173 1.46E-36 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_47710 6123d5a7458846d18af7e7a74d0b6292 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 3.0E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_47710 6123d5a7458846d18af7e7a74d0b6292 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 3.0E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_47710 6123d5a7458846d18af7e7a74d0b6292 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 3.0E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_47710 6123d5a7458846d18af7e7a74d0b6292 221 SMART SM00421 151 208 1.9E-24 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_47710 6123d5a7458846d18af7e7a74d0b6292 221 SMART SM00448 4 116 1.3E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_23630 2daf2ffae7f4839bbb90ec1731914f1b 188 TIGRFAM TIGR00277 HDIG: HDIG domain 25 98 1.0E-8 T 14-10-2018 IPR006675 HDIG domain AMIS_23630 2daf2ffae7f4839bbb90ec1731914f1b 188 SUPERFAMILY SSF109604 23 135 5.07E-14 T 14-10-2018 AMIS_23630 2daf2ffae7f4839bbb90ec1731914f1b 188 Pfam PF01966 HD domain 25 135 9.4E-11 T 14-10-2018 IPR006674 HD domain AMIS_23630 2daf2ffae7f4839bbb90ec1731914f1b 188 SMART SM00471 21 146 1.1E-4 T 14-10-2018 IPR003607 HD/PDEase domain AMIS_23630 2daf2ffae7f4839bbb90ec1731914f1b 188 Gene3D G3DSA:1.10.3210.10 3 139 1.2E-8 T 14-10-2018 AMIS_67720 6031be66fa51cb32de2081ae7fa4e367 534 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 47 222 9.0E-10 T 14-10-2018 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 Reactome: R-HSA-5173105 AMIS_23340 f2a05b1c171bf43ca02be3b4a318d424 280 Gene3D G3DSA:3.40.710.10 47 279 6.8E-36 T 14-10-2018 AMIS_23340 f2a05b1c171bf43ca02be3b4a318d424 280 Pfam PF13354 Beta-lactamase enzyme family 116 202 2.1E-9 T 14-10-2018 AMIS_23340 f2a05b1c171bf43ca02be3b4a318d424 280 SUPERFAMILY SSF56601 59 278 6.28E-26 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMIS_66560 810713f82c49ca57b4842cb97eae6c0a 212 SUPERFAMILY SSF56214 100 209 9.77E-17 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 AMIS_66560 810713f82c49ca57b4842cb97eae6c0a 212 PRINTS PR01399 Enterobactin synthetase component D signature 67 85 2.0E-24 T 14-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 AMIS_66560 810713f82c49ca57b4842cb97eae6c0a 212 PRINTS PR01399 Enterobactin synthetase component D signature 37 57 2.0E-24 T 14-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 AMIS_66560 810713f82c49ca57b4842cb97eae6c0a 212 PRINTS PR01399 Enterobactin synthetase component D signature 144 160 2.0E-24 T 14-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 AMIS_66560 810713f82c49ca57b4842cb97eae6c0a 212 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 101 178 2.7E-11 T 14-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 AMIS_74810 8b79611740c7bef1b43a5f62401d3f1a 425 Pfam PF00591 Glycosyl transferase family, a/b domain 80 291 5.3E-31 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AMIS_74810 8b79611740c7bef1b43a5f62401d3f1a 425 SUPERFAMILY SSF54680 323 424 2.09E-23 T 14-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AMIS_74810 8b79611740c7bef1b43a5f62401d3f1a 425 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 7 407 1.7E-166 T 14-10-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 AMIS_74810 8b79611740c7bef1b43a5f62401d3f1a 425 Pfam PF02885 Glycosyl transferase family, helical bundle domain 7 69 4.7E-19 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 AMIS_74810 8b79611740c7bef1b43a5f62401d3f1a 425 PIRSF PIRSF000478 3 424 4.2E-150 T 14-10-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AMIS_74810 8b79611740c7bef1b43a5f62401d3f1a 425 Gene3D G3DSA:3.90.1170.30 322 410 3.1E-132 T 14-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AMIS_74810 8b79611740c7bef1b43a5f62401d3f1a 425 SMART SM00941 336 410 3.2E-28 T 14-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AMIS_74810 8b79611740c7bef1b43a5f62401d3f1a 425 SUPERFAMILY SSF52418 72 318 1.57E-80 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 AMIS_74810 8b79611740c7bef1b43a5f62401d3f1a 425 Gene3D G3DSA:3.40.1030.10 81 321 3.1E-132 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 AMIS_74810 8b79611740c7bef1b43a5f62401d3f1a 425 Gene3D G3DSA:1.20.970.10 5 70 1.8E-23 T 14-10-2018 AMIS_74810 8b79611740c7bef1b43a5f62401d3f1a 425 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 113 128 - T 14-10-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AMIS_74810 8b79611740c7bef1b43a5f62401d3f1a 425 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 336 409 4.0E-20 T 14-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AMIS_74810 8b79611740c7bef1b43a5f62401d3f1a 425 SUPERFAMILY SSF47648 6 72 2.88E-21 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 AMIS_73770 d5ce9b85d260e5959fb9024733a93aaa 219 SUPERFAMILY SSF51197 29 214 1.24E-37 T 14-10-2018 AMIS_73770 d5ce9b85d260e5959fb9024733a93aaa 219 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 122 204 3.8E-13 T 14-10-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like AMIS_73770 d5ce9b85d260e5959fb9024733a93aaa 219 Gene3D G3DSA:2.60.120.590 41 217 9.6E-34 T 14-10-2018 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily AMIS_6610 9933039433c4f4ff4233fd8d03ffbab4 627 SUPERFAMILY SSF53697 259 627 1.95E-113 T 14-10-2018 AMIS_6610 9933039433c4f4ff4233fd8d03ffbab4 627 Gene3D G3DSA:3.40.50.10490 461 612 2.9E-141 T 14-10-2018 AMIS_6610 9933039433c4f4ff4233fd8d03ffbab4 627 Pfam PF13522 Glutamine amidotransferase domain 70 201 8.3E-20 T 14-10-2018 AMIS_6610 9933039433c4f4ff4233fd8d03ffbab4 627 Pfam PF01380 SIS domain 476 609 6.0E-22 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AMIS_6610 9933039433c4f4ff4233fd8d03ffbab4 627 Pfam PF01380 SIS domain 304 428 9.0E-35 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AMIS_6610 9933039433c4f4ff4233fd8d03ffbab4 627 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 627 40.706 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 AMIS_6610 9933039433c4f4ff4233fd8d03ffbab4 627 SUPERFAMILY SSF56235 2 244 2.92E-63 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMIS_6610 9933039433c4f4ff4233fd8d03ffbab4 627 Gene3D G3DSA:3.40.50.10490 261 626 2.9E-141 T 14-10-2018 AMIS_6610 9933039433c4f4ff4233fd8d03ffbab4 627 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 627 3.8E-243 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 AMIS_6610 9933039433c4f4ff4233fd8d03ffbab4 627 Gene3D G3DSA:3.60.20.10 2 253 1.5E-71 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMIS_5100 208af24e468af88326ad2b4bd180367e 732 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 99 254 2.8E-30 T 14-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like AMIS_56700 21fa13a3ee1dc7784c0d0adb1be74dd6 252 Pfam PF05711 Macrocin-O-methyltransferase (TylF) 67 214 2.9E-13 T 14-10-2018 IPR008884 Macrocin-O-methyltransferase AMIS_56700 21fa13a3ee1dc7784c0d0adb1be74dd6 252 SUPERFAMILY SSF53335 18 223 1.32E-10 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_56700 21fa13a3ee1dc7784c0d0adb1be74dd6 252 Gene3D G3DSA:3.40.50.150 12 252 4.9E-78 T 14-10-2018 AMIS_36540 8adf0529eb8429200c1e6dc4a4d535f8 387 SUPERFAMILY SSF46689 10 81 2.79E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_36540 8adf0529eb8429200c1e6dc4a4d535f8 387 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 4.6E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_36540 8adf0529eb8429200c1e6dc4a4d535f8 387 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 4.6E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_36540 8adf0529eb8429200c1e6dc4a4d535f8 387 SUPERFAMILY SSF46689 202 282 9.23E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_36540 8adf0529eb8429200c1e6dc4a4d535f8 387 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 64 4.5E-18 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_36540 8adf0529eb8429200c1e6dc4a4d535f8 387 Pfam PF00440 Bacterial regulatory proteins, tetR family 212 258 8.1E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_36540 8adf0529eb8429200c1e6dc4a4d535f8 387 Gene3D G3DSA:1.10.10.60 207 248 2.0E-14 T 14-10-2018 AMIS_36540 8adf0529eb8429200c1e6dc4a4d535f8 387 Gene3D G3DSA:1.10.357.10 60 188 4.8E-17 T 14-10-2018 AMIS_36540 8adf0529eb8429200c1e6dc4a4d535f8 387 Gene3D G3DSA:1.10.357.10 249 387 2.1E-21 T 14-10-2018 AMIS_36540 8adf0529eb8429200c1e6dc4a4d535f8 387 ProSitePatterns PS01081 TetR-type HTH domain signature. 30 60 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMIS_36540 8adf0529eb8429200c1e6dc4a4d535f8 387 Gene3D G3DSA:1.10.10.60 6 59 2.2E-19 T 14-10-2018 AMIS_12660 71f937f43bf5b70c5e104d29f114b4cc 546 SUPERFAMILY SSF53474 303 538 7.55E-38 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_12660 71f937f43bf5b70c5e104d29f114b4cc 546 SUPERFAMILY SSF49785 37 174 5.1E-21 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_12660 71f937f43bf5b70c5e104d29f114b4cc 546 Gene3D G3DSA:3.40.50.1820 302 539 2.3E-56 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_12660 71f937f43bf5b70c5e104d29f114b4cc 546 Pfam PF13364 Beta-galactosidase jelly roll domain 45 160 7.6E-5 T 14-10-2018 IPR025300 Beta-galactosidase jelly roll domain KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024096|Reactome: R-HSA-2206308|Reactome: R-HSA-4085001|Reactome: R-HSA-6798695 AMIS_12660 71f937f43bf5b70c5e104d29f114b4cc 546 Pfam PF00756 Putative esterase 309 533 1.5E-28 T 14-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 AMIS_12660 71f937f43bf5b70c5e104d29f114b4cc 546 Gene3D G3DSA:2.60.120.260 31 184 1.1E-24 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_32760 52b71e427d25bc49459586c07bddcebe 207 SUPERFAMILY SSF46785 9 181 2.04E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_32760 52b71e427d25bc49459586c07bddcebe 207 Pfam PF03551 Transcriptional regulator PadR-like family 13 85 7.5E-9 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal AMIS_32760 52b71e427d25bc49459586c07bddcebe 207 Gene3D G3DSA:1.10.10.10 8 93 2.0E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_16860 addedc7cb594056e6b7774e1779ee373 590 Gene3D G3DSA:1.10.490.10 226 353 1.5E-12 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 AMIS_16860 addedc7cb594056e6b7774e1779ee373 590 SUPERFAMILY SSF52343 463 587 2.36E-27 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMIS_16860 addedc7cb594056e6b7774e1779ee373 590 Gene3D G3DSA:3.40.50.80 458 588 9.3E-25 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMIS_16860 addedc7cb594056e6b7774e1779ee373 590 SUPERFAMILY SSF63380 363 457 3.76E-17 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AMIS_16860 addedc7cb594056e6b7774e1779ee373 590 Pfam PF00175 Oxidoreductase NAD-binding domain 470 570 2.3E-13 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AMIS_16860 addedc7cb594056e6b7774e1779ee373 590 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 469 488 1.6E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMIS_16860 addedc7cb594056e6b7774e1779ee373 590 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 494 503 1.6E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMIS_16860 addedc7cb594056e6b7774e1779ee373 590 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 409 416 1.6E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMIS_16860 addedc7cb594056e6b7774e1779ee373 590 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 391 401 1.6E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMIS_16860 addedc7cb594056e6b7774e1779ee373 590 PRINTS PR00410 Phenol hydroxylase reductase family signature 391 403 1.8E-11 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AMIS_16860 addedc7cb594056e6b7774e1779ee373 590 PRINTS PR00410 Phenol hydroxylase reductase family signature 469 488 1.8E-11 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AMIS_16860 addedc7cb594056e6b7774e1779ee373 590 PRINTS PR00410 Phenol hydroxylase reductase family signature 557 565 1.8E-11 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AMIS_16860 addedc7cb594056e6b7774e1779ee373 590 PRINTS PR00410 Phenol hydroxylase reductase family signature 494 503 1.8E-11 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AMIS_16860 addedc7cb594056e6b7774e1779ee373 590 SUPERFAMILY SSF46458 237 352 3.09E-10 T 14-10-2018 IPR009050 Globin-like superfamily AMIS_16860 addedc7cb594056e6b7774e1779ee373 590 Gene3D G3DSA:2.40.30.10 356 456 5.5E-16 T 14-10-2018 AMIS_79610 b9cec258b4a86678560e7b17f7712a8b 404 Pfam PF07730 Histidine kinase 185 253 6.5E-9 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMIS_79610 b9cec258b4a86678560e7b17f7712a8b 404 Gene3D G3DSA:3.30.565.10 263 392 2.9E-18 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_79610 b9cec258b4a86678560e7b17f7712a8b 404 SUPERFAMILY SSF55874 300 392 6.82E-8 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_12940 10ba2e8330ef5409fb1c646b9332a3da 114 Pfam PF01740 STAS domain 17 101 4.3E-9 T 14-10-2018 IPR002645 STAS domain AMIS_12940 10ba2e8330ef5409fb1c646b9332a3da 114 Gene3D G3DSA:3.30.750.24 4 114 7.9E-20 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_12940 10ba2e8330ef5409fb1c646b9332a3da 114 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 11 101 1.3E-16 T 14-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 AMIS_12940 10ba2e8330ef5409fb1c646b9332a3da 114 SUPERFAMILY SSF52091 10 113 2.16E-17 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_30100 1f447fb086c19dda135ffad6f4410bb8 496 Pfam PF00916 Sulfate permease family 176 368 1.5E-26 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 AMIS_30100 1f447fb086c19dda135ffad6f4410bb8 496 Pfam PF00916 Sulfate permease family 27 157 6.5E-22 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 AMIS_30100 1f447fb086c19dda135ffad6f4410bb8 496 Pfam PF01740 STAS domain 414 486 1.6E-6 T 14-10-2018 IPR002645 STAS domain AMIS_30100 1f447fb086c19dda135ffad6f4410bb8 496 Gene3D G3DSA:3.30.750.24 399 490 2.0E-27 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_30100 1f447fb086c19dda135ffad6f4410bb8 496 SUPERFAMILY SSF52091 408 484 9.03E-13 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_31800 93b28218341419388f65536f6baf03c7 405 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 342 356 - T 14-10-2018 IPR019775 WD40 repeat, conserved site AMIS_31800 93b28218341419388f65536f6baf03c7 405 SMART SM00320 52 87 100.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_31800 93b28218341419388f65536f6baf03c7 405 SMART SM00320 90 129 0.0019 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_31800 93b28218341419388f65536f6baf03c7 405 SMART SM00320 133 172 1.7E-9 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_31800 93b28218341419388f65536f6baf03c7 405 SMART SM00320 359 398 3.4E-7 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_31800 93b28218341419388f65536f6baf03c7 405 SMART SM00320 275 312 0.073 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_31800 93b28218341419388f65536f6baf03c7 405 SMART SM00320 229 268 0.015 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_31800 93b28218341419388f65536f6baf03c7 405 SMART SM00320 175 225 6.0E-8 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_31800 93b28218341419388f65536f6baf03c7 405 SMART SM00320 316 355 3.4E-11 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_31800 93b28218341419388f65536f6baf03c7 405 Gene3D G3DSA:2.130.10.10 52 212 3.9E-45 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_31800 93b28218341419388f65536f6baf03c7 405 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 299 313 - T 14-10-2018 IPR019775 WD40 repeat, conserved site AMIS_31800 93b28218341419388f65536f6baf03c7 405 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 159 173 - T 14-10-2018 IPR019775 WD40 repeat, conserved site AMIS_31800 93b28218341419388f65536f6baf03c7 405 PRINTS PR00320 G protein beta WD-40 repeat signature 159 173 5.5E-7 T 14-10-2018 IPR020472 G-protein beta WD-40 repeat AMIS_31800 93b28218341419388f65536f6baf03c7 405 PRINTS PR00320 G protein beta WD-40 repeat signature 299 313 5.5E-7 T 14-10-2018 IPR020472 G-protein beta WD-40 repeat AMIS_31800 93b28218341419388f65536f6baf03c7 405 PRINTS PR00320 G protein beta WD-40 repeat signature 342 356 5.5E-7 T 14-10-2018 IPR020472 G-protein beta WD-40 repeat AMIS_31800 93b28218341419388f65536f6baf03c7 405 Pfam PF00400 WD domain, G-beta repeat 242 268 0.056 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_31800 93b28218341419388f65536f6baf03c7 405 Pfam PF00400 WD domain, G-beta repeat 322 355 4.2E-10 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_31800 93b28218341419388f65536f6baf03c7 405 Pfam PF00400 WD domain, G-beta repeat 365 397 1.5E-5 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_31800 93b28218341419388f65536f6baf03c7 405 Pfam PF00400 WD domain, G-beta repeat 140 171 1.3E-9 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_31800 93b28218341419388f65536f6baf03c7 405 Pfam PF00400 WD domain, G-beta repeat 96 129 0.0012 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_31800 93b28218341419388f65536f6baf03c7 405 Pfam PF00400 WD domain, G-beta repeat 285 312 0.0081 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_31800 93b28218341419388f65536f6baf03c7 405 Pfam PF00400 WD domain, G-beta repeat 176 224 1.3E-8 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_31800 93b28218341419388f65536f6baf03c7 405 Gene3D G3DSA:2.130.10.10 278 405 1.0E-41 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_31800 93b28218341419388f65536f6baf03c7 405 SUPERFAMILY SSF50978 67 401 7.69E-84 T 14-10-2018 IPR036322 WD40-repeat-containing domain superfamily GO:0005515 AMIS_31800 93b28218341419388f65536f6baf03c7 405 Gene3D G3DSA:2.130.10.10 213 277 3.3E-11 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_64990 6c508a24c906c5419cb55ed0d01733a6 338 Gene3D G3DSA:3.30.460.20 9 131 1.7E-26 T 14-10-2018 AMIS_64990 6c508a24c906c5419cb55ed0d01733a6 338 Pfam PF01544 CorA-like Mg2+ transporter protein 36 334 4.9E-52 T 14-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 AMIS_64990 6c508a24c906c5419cb55ed0d01733a6 338 SUPERFAMILY SSF144083 275 335 7.98E-13 T 14-10-2018 AMIS_64990 6c508a24c906c5419cb55ed0d01733a6 338 SUPERFAMILY SSF143865 10 273 2.35E-46 T 14-10-2018 AMIS_64990 6c508a24c906c5419cb55ed0d01733a6 338 Gene3D G3DSA:1.20.58.340 135 260 3.2E-18 T 14-10-2018 AMIS_64990 6c508a24c906c5419cb55ed0d01733a6 338 Gene3D G3DSA:1.20.58.340 262 338 3.5E-15 T 14-10-2018 AMIS_43980 a3ecc2a60654d79c77b0a49b0ef440fe 306 SMART SM00656 33 242 4.6E-45 T 14-10-2018 IPR002022 Pectate lyase AMIS_43980 a3ecc2a60654d79c77b0a49b0ef440fe 306 SMART SM00710 203 225 580.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMIS_43980 a3ecc2a60654d79c77b0a49b0ef440fe 306 SMART SM00710 125 147 5600.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMIS_43980 a3ecc2a60654d79c77b0a49b0ef440fe 306 SMART SM00710 101 123 3.1 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMIS_43980 a3ecc2a60654d79c77b0a49b0ef440fe 306 Gene3D G3DSA:2.160.20.10 17 306 4.6E-91 T 14-10-2018 IPR012334 Pectin lyase fold AMIS_43980 a3ecc2a60654d79c77b0a49b0ef440fe 306 SUPERFAMILY SSF51126 19 305 2.99E-73 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor AMIS_43980 a3ecc2a60654d79c77b0a49b0ef440fe 306 Pfam PF00544 Pectate lyase 70 236 2.2E-34 T 14-10-2018 IPR002022 Pectate lyase AMIS_46530 8c263eb7fae3405063554e941d9134eb 412 SUPERFAMILY SSF51735 2 226 1.61E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_46530 8c263eb7fae3405063554e941d9134eb 412 SUPERFAMILY SSF48179 233 410 9.52E-28 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMIS_46530 8c263eb7fae3405063554e941d9134eb 412 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 2 148 1.7E-6 T 14-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 AMIS_46530 8c263eb7fae3405063554e941d9134eb 412 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 181 355 1.7E-21 T 14-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 AMIS_46530 8c263eb7fae3405063554e941d9134eb 412 Gene3D G3DSA:3.40.50.720 1 226 2.6E-33 T 14-10-2018 AMIS_46530 8c263eb7fae3405063554e941d9134eb 412 Gene3D G3DSA:1.10.1040.10 232 412 9.7E-34 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AMIS_66160 1eb3ef37b0f9fbd1387c0699a836bcb2 960 SMART SM00237 264 372 0.013 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 AMIS_66160 1eb3ef37b0f9fbd1387c0699a836bcb2 960 SMART SM00237 153 251 9.8E-7 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 AMIS_66160 1eb3ef37b0f9fbd1387c0699a836bcb2 960 SMART SM00237 398 496 0.0043 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 AMIS_66160 1eb3ef37b0f9fbd1387c0699a836bcb2 960 Pfam PF03160 Calx-beta domain 81 130 180.0 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 AMIS_66160 1eb3ef37b0f9fbd1387c0699a836bcb2 960 Pfam PF03160 Calx-beta domain 155 249 1.5E-12 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 AMIS_66160 1eb3ef37b0f9fbd1387c0699a836bcb2 960 Pfam PF03160 Calx-beta domain 265 371 1.1E-4 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 AMIS_66160 1eb3ef37b0f9fbd1387c0699a836bcb2 960 Pfam PF03160 Calx-beta domain 424 495 1.3E-8 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 AMIS_66160 1eb3ef37b0f9fbd1387c0699a836bcb2 960 Pfam PF03160 Calx-beta domain 513 617 0.15 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 AMIS_66160 1eb3ef37b0f9fbd1387c0699a836bcb2 960 SUPERFAMILY SSF141072 284 395 1.57E-11 T 14-10-2018 IPR038081 CalX-like domain superfamily AMIS_66160 1eb3ef37b0f9fbd1387c0699a836bcb2 960 SUPERFAMILY SSF141072 168 274 7.72E-11 T 14-10-2018 IPR038081 CalX-like domain superfamily AMIS_66160 1eb3ef37b0f9fbd1387c0699a836bcb2 960 SUPERFAMILY SSF141072 522 649 6.02E-7 T 14-10-2018 IPR038081 CalX-like domain superfamily AMIS_66160 1eb3ef37b0f9fbd1387c0699a836bcb2 960 SUPERFAMILY SSF141072 417 522 1.03E-17 T 14-10-2018 IPR038081 CalX-like domain superfamily AMIS_66160 1eb3ef37b0f9fbd1387c0699a836bcb2 960 SUPERFAMILY SSF141072 38 163 1.16E-7 T 14-10-2018 IPR038081 CalX-like domain superfamily AMIS_66160 1eb3ef37b0f9fbd1387c0699a836bcb2 960 Gene3D G3DSA:2.60.40.2030 165 286 8.1E-12 T 14-10-2018 IPR038081 CalX-like domain superfamily AMIS_66160 1eb3ef37b0f9fbd1387c0699a836bcb2 960 Gene3D G3DSA:2.60.40.2030 413 523 1.4E-15 T 14-10-2018 IPR038081 CalX-like domain superfamily AMIS_66160 1eb3ef37b0f9fbd1387c0699a836bcb2 960 Gene3D G3DSA:2.60.40.2030 287 393 2.6E-9 T 14-10-2018 IPR038081 CalX-like domain superfamily AMIS_33730 6e27e4cc96988786e32dd9180dbeec60 463 SUPERFAMILY SSF53383 99 448 3.26E-70 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_33730 6e27e4cc96988786e32dd9180dbeec60 463 Gene3D G3DSA:1.10.10.10 15 87 1.4E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_33730 6e27e4cc96988786e32dd9180dbeec60 463 SMART SM00345 24 83 6.5E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_33730 6e27e4cc96988786e32dd9180dbeec60 463 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 83 2.4E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_33730 6e27e4cc96988786e32dd9180dbeec60 463 SUPERFAMILY SSF46785 17 87 1.09E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_33730 6e27e4cc96988786e32dd9180dbeec60 463 Pfam PF00155 Aminotransferase class I and II 233 441 2.1E-12 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMIS_33730 6e27e4cc96988786e32dd9180dbeec60 463 Pfam PF00155 Aminotransferase class I and II 146 219 6.3E-9 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMIS_33730 6e27e4cc96988786e32dd9180dbeec60 463 Gene3D G3DSA:3.40.640.10 102 453 9.4E-67 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_32460 d1b1f5f4780f6429159bd4cd71a04d02 650 SMART SM00710 328 354 540.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMIS_32460 d1b1f5f4780f6429159bd4cd71a04d02 650 SMART SM00710 244 266 250.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMIS_32460 d1b1f5f4780f6429159bd4cd71a04d02 650 SMART SM00710 360 390 850.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMIS_32460 d1b1f5f4780f6429159bd4cd71a04d02 650 Gene3D G3DSA:2.60.40.1180 76 203 2.7E-259 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta AMIS_32460 d1b1f5f4780f6429159bd4cd71a04d02 650 SUPERFAMILY SSF51126 18 440 7.61E-44 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor AMIS_32460 d1b1f5f4780f6429159bd4cd71a04d02 650 Pfam PF13229 Right handed beta helix region 306 429 4.9E-10 T 14-10-2018 IPR039448 Right handed beta helix domain AMIS_32460 d1b1f5f4780f6429159bd4cd71a04d02 650 Gene3D G3DSA:2.160.20.10 4 642 2.7E-259 T 14-10-2018 IPR012334 Pectin lyase fold AMIS_32460 d1b1f5f4780f6429159bd4cd71a04d02 650 Pfam PF07602 Protein of unknown function (DUF1565) 8 47 9.4E-7 T 14-10-2018 IPR011459 Domain of unknown function DUF1565 AMIS_38720 ac2c84659efa759d2e6c6ce7ff1b2ff5 268 Pfam PF00106 short chain dehydrogenase 8 198 1.2E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_38720 ac2c84659efa759d2e6c6ce7ff1b2ff5 268 PIRSF PIRSF000126 1 265 2.6E-50 T 14-10-2018 AMIS_38720 ac2c84659efa759d2e6c6ce7ff1b2ff5 268 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMIS_38720 ac2c84659efa759d2e6c6ce7ff1b2ff5 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.8E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_38720 ac2c84659efa759d2e6c6ce7ff1b2ff5 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 1.8E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_38720 ac2c84659efa759d2e6c6ce7ff1b2ff5 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 1.8E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_38720 ac2c84659efa759d2e6c6ce7ff1b2ff5 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.8E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_38720 ac2c84659efa759d2e6c6ce7ff1b2ff5 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 1.8E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_38720 ac2c84659efa759d2e6c6ce7ff1b2ff5 268 Gene3D G3DSA:3.40.50.720 5 262 8.4E-56 T 14-10-2018 AMIS_38720 ac2c84659efa759d2e6c6ce7ff1b2ff5 268 SUPERFAMILY SSF51735 6 251 3.59E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_25170 59b34b9c0d809b1282600483846d9d24 243 Gene3D G3DSA:1.20.1080.10 175 242 1.2E-5 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AMIS_25170 59b34b9c0d809b1282600483846d9d24 243 Pfam PF00230 Major intrinsic protein 5 171 2.2E-17 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AMIS_25170 59b34b9c0d809b1282600483846d9d24 243 Gene3D G3DSA:1.20.1080.10 2 174 6.4E-24 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AMIS_25170 59b34b9c0d809b1282600483846d9d24 243 PRINTS PR00783 Major intrinsic protein family signature 135 153 3.9E-15 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AMIS_25170 59b34b9c0d809b1282600483846d9d24 243 PRINTS PR00783 Major intrinsic protein family signature 8 27 3.9E-15 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AMIS_25170 59b34b9c0d809b1282600483846d9d24 243 PRINTS PR00783 Major intrinsic protein family signature 50 74 3.9E-15 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AMIS_25170 59b34b9c0d809b1282600483846d9d24 243 SUPERFAMILY SSF81338 5 221 1.39E-32 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AMIS_13020 94f2a12dabb936a84d3eff20b5b31370 202 Gene3D G3DSA:3.40.1050.10 3 202 3.8E-52 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 AMIS_13020 94f2a12dabb936a84d3eff20b5b31370 202 Pfam PF00484 Carbonic anhydrase 52 197 1.8E-30 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMIS_13020 94f2a12dabb936a84d3eff20b5b31370 202 SUPERFAMILY SSF53056 5 201 5.49E-42 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 AMIS_13020 94f2a12dabb936a84d3eff20b5b31370 202 SMART SM00947 44 202 1.3E-28 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMIS_51300 bdf7351d3e688aa9d126def69932eed8 352 SUPERFAMILY SSF52540 49 274 5.32E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_51300 bdf7351d3e688aa9d126def69932eed8 352 Pfam PF00005 ABC transporter 67 221 5.9E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_51300 bdf7351d3e688aa9d126def69932eed8 352 Gene3D G3DSA:3.40.50.300 48 327 1.7E-57 T 14-10-2018 AMIS_51300 bdf7351d3e688aa9d126def69932eed8 352 SMART SM00382 76 270 8.6E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_9060 57b01e22e40f40bc97879efe402a5603 560 Gene3D G3DSA:3.40.50.300 286 560 2.9E-106 T 14-10-2018 AMIS_9060 57b01e22e40f40bc97879efe402a5603 560 SUPERFAMILY SSF52540 164 558 4.51E-100 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_9060 57b01e22e40f40bc97879efe402a5603 560 Gene3D G3DSA:3.30.300.160 70 146 7.2E-11 T 14-10-2018 AMIS_9060 57b01e22e40f40bc97879efe402a5603 560 SUPERFAMILY SSF160246 12 147 7.72E-28 T 14-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily AMIS_9060 57b01e22e40f40bc97879efe402a5603 560 Gene3D G3DSA:3.30.450.90 147 283 5.1E-46 T 14-10-2018 AMIS_9060 57b01e22e40f40bc97879efe402a5603 560 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 378 392 - T 14-10-2018 IPR001482 Type II/IV secretion system protein AMIS_9060 57b01e22e40f40bc97879efe402a5603 560 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 47 150 2.4E-20 T 14-10-2018 IPR007831 General secretory system II, protein E, N-terminal AMIS_9060 57b01e22e40f40bc97879efe402a5603 560 Pfam PF00437 Type II/IV secretion system protein 186 450 4.0E-77 T 14-10-2018 IPR001482 Type II/IV secretion system protein AMIS_9060 57b01e22e40f40bc97879efe402a5603 560 SMART SM00382 311 434 0.0012 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_19150 4db7146515f3115f979107ac53f90496 303 Pfam PF00175 Oxidoreductase NAD-binding domain 101 184 7.3E-5 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AMIS_19150 4db7146515f3115f979107ac53f90496 303 Gene3D G3DSA:3.40.50.80 93 201 4.4E-18 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMIS_19150 4db7146515f3115f979107ac53f90496 303 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 251 259 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AMIS_19150 4db7146515f3115f979107ac53f90496 303 SUPERFAMILY SSF63380 3 90 5.26E-20 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AMIS_19150 4db7146515f3115f979107ac53f90496 303 Pfam PF00970 Oxidoreductase FAD-binding domain 22 90 6.4E-10 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 AMIS_19150 4db7146515f3115f979107ac53f90496 303 SUPERFAMILY SSF52343 81 203 4.85E-25 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMIS_19150 4db7146515f3115f979107ac53f90496 303 Gene3D G3DSA:2.40.30.10 1 88 1.5E-19 T 14-10-2018 AMIS_19150 4db7146515f3115f979107ac53f90496 303 SUPERFAMILY SSF54292 195 296 2.62E-27 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AMIS_19150 4db7146515f3115f979107ac53f90496 303 Gene3D G3DSA:3.10.20.30 202 302 4.0E-28 T 14-10-2018 IPR012675 Beta-grasp domain superfamily AMIS_19150 4db7146515f3115f979107ac53f90496 303 PRINTS PR00410 Phenol hydroxylase reductase family signature 41 48 6.3E-11 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AMIS_19150 4db7146515f3115f979107ac53f90496 303 PRINTS PR00410 Phenol hydroxylase reductase family signature 85 94 6.3E-11 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AMIS_19150 4db7146515f3115f979107ac53f90496 303 PRINTS PR00410 Phenol hydroxylase reductase family signature 26 38 6.3E-11 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AMIS_19150 4db7146515f3115f979107ac53f90496 303 PRINTS PR00410 Phenol hydroxylase reductase family signature 100 119 6.3E-11 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AMIS_19150 4db7146515f3115f979107ac53f90496 303 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 221 293 2.4E-15 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AMIS_6830 6c6c393c75c5a15b95e5eca63a9a89a3 392 Gene3D G3DSA:3.30.420.40 91 378 2.2E-67 T 14-10-2018 AMIS_6830 6c6c393c75c5a15b95e5eca63a9a89a3 392 SUPERFAMILY SSF53067 83 386 1.65E-45 T 14-10-2018 AMIS_6830 6c6c393c75c5a15b95e5eca63a9a89a3 392 Gene3D G3DSA:1.10.10.10 3 76 7.0E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_6830 6c6c393c75c5a15b95e5eca63a9a89a3 392 Pfam PF00480 ROK family 91 381 2.4E-46 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AMIS_6830 6c6c393c75c5a15b95e5eca63a9a89a3 392 Gene3D G3DSA:3.30.420.40 208 368 2.2E-67 T 14-10-2018 AMIS_6830 6c6c393c75c5a15b95e5eca63a9a89a3 392 SUPERFAMILY SSF46785 10 74 3.14E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_76350 e80c9e9e0fbc0a3bb0d78c3080acbbe4 682 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 8 674 3.7E-233 T 14-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 AMIS_76350 e80c9e9e0fbc0a3bb0d78c3080acbbe4 682 Pfam PF00771 FHIPEP family 18 663 5.8E-244 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AMIS_76350 e80c9e9e0fbc0a3bb0d78c3080acbbe4 682 Gene3D G3DSA:1.10.8.540 485 574 2.5E-21 T 14-10-2018 AMIS_76350 e80c9e9e0fbc0a3bb0d78c3080acbbe4 682 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 129 152 - T 14-10-2018 IPR025505 FHIPEP conserved site AMIS_76350 e80c9e9e0fbc0a3bb0d78c3080acbbe4 682 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 124 140 1.1E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AMIS_76350 e80c9e9e0fbc0a3bb0d78c3080acbbe4 682 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 143 161 1.1E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AMIS_76350 e80c9e9e0fbc0a3bb0d78c3080acbbe4 682 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 62 81 1.1E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AMIS_76350 e80c9e9e0fbc0a3bb0d78c3080acbbe4 682 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 25 38 1.1E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AMIS_76350 e80c9e9e0fbc0a3bb0d78c3080acbbe4 682 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 173 190 1.1E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AMIS_76350 e80c9e9e0fbc0a3bb0d78c3080acbbe4 682 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 224 238 1.1E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AMIS_76350 e80c9e9e0fbc0a3bb0d78c3080acbbe4 682 PIRSF PIRSF005419 2 679 6.3E-249 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AMIS_76350 e80c9e9e0fbc0a3bb0d78c3080acbbe4 682 Gene3D G3DSA:3.40.30.60 344 484 4.9E-40 T 14-10-2018 AMIS_76350 e80c9e9e0fbc0a3bb0d78c3080acbbe4 682 Gene3D G3DSA:1.10.490.80 575 674 1.0E-13 T 14-10-2018 AMIS_54080 771da3a24620d01ce72f3b2f2cd04de6 401 SUPERFAMILY SSF51197 14 286 8.1E-50 T 14-10-2018 AMIS_54080 771da3a24620d01ce72f3b2f2cd04de6 401 Pfam PF08007 Cupin superfamily protein 14 293 5.6E-37 T 14-10-2018 IPR003347 JmjC domain AMIS_54080 771da3a24620d01ce72f3b2f2cd04de6 401 SMART SM00558 84 245 1.4E-4 T 14-10-2018 IPR003347 JmjC domain AMIS_54080 771da3a24620d01ce72f3b2f2cd04de6 401 Gene3D G3DSA:2.60.120.650 4 234 5.0E-62 T 14-10-2018 AMIS_58990 e0e8ae74bcc3d6d01e63e1b3c8c831d7 1009 Gene3D G3DSA:1.25.40.10 863 1009 1.8E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_58990 e0e8ae74bcc3d6d01e63e1b3c8c831d7 1009 SUPERFAMILY SSF46894 773 846 3.74E-8 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_58990 e0e8ae74bcc3d6d01e63e1b3c8c831d7 1009 Gene3D G3DSA:1.10.10.10 762 862 5.7E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_58990 e0e8ae74bcc3d6d01e63e1b3c8c831d7 1009 Pfam PF03704 Bacterial transcriptional activator domain 862 997 1.2E-9 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain AMIS_58990 e0e8ae74bcc3d6d01e63e1b3c8c831d7 1009 SMART SM01043 862 1003 1.1E-10 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain AMIS_58990 e0e8ae74bcc3d6d01e63e1b3c8c831d7 1009 SUPERFAMILY SSF48452 859 1001 1.63E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_58990 e0e8ae74bcc3d6d01e63e1b3c8c831d7 1009 SMART SM00862 784 854 3.6E-4 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_28630 9801f0b1ca128a5aac49dabc066a4a4e 537 SUPERFAMILY SSF103473 18 505 2.88E-67 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_28630 9801f0b1ca128a5aac49dabc066a4a4e 537 PRINTS PR01036 Tetracycline resistance protein TetB signature 146 170 7.7E-7 T 14-10-2018 AMIS_28630 9801f0b1ca128a5aac49dabc066a4a4e 537 PRINTS PR01036 Tetracycline resistance protein TetB signature 116 136 7.7E-7 T 14-10-2018 AMIS_28630 9801f0b1ca128a5aac49dabc066a4a4e 537 PRINTS PR01036 Tetracycline resistance protein TetB signature 411 430 7.7E-7 T 14-10-2018 AMIS_28630 9801f0b1ca128a5aac49dabc066a4a4e 537 PRINTS PR01036 Tetracycline resistance protein TetB signature 211 229 7.7E-7 T 14-10-2018 AMIS_28630 9801f0b1ca128a5aac49dabc066a4a4e 537 PRINTS PR01036 Tetracycline resistance protein TetB signature 369 389 7.7E-7 T 14-10-2018 AMIS_28630 9801f0b1ca128a5aac49dabc066a4a4e 537 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 23 493 4.0E-75 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 AMIS_28630 9801f0b1ca128a5aac49dabc066a4a4e 537 Pfam PF07690 Major Facilitator Superfamily 28 420 9.4E-51 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_28630 9801f0b1ca128a5aac49dabc066a4a4e 537 Gene3D G3DSA:1.20.1720.10 24 225 8.6E-49 T 14-10-2018 AMIS_57840 1435447a58ccf2c1ad9a01048c8062fe 350 Pfam PF02625 XdhC and CoxI family 11 78 9.9E-25 T 14-10-2018 IPR003777 XdhC- CoxI AMIS_57840 1435447a58ccf2c1ad9a01048c8062fe 350 Pfam PF02625 XdhC and CoxI family 114 168 2.7E-8 T 14-10-2018 IPR003777 XdhC- CoxI AMIS_57840 1435447a58ccf2c1ad9a01048c8062fe 350 Gene3D G3DSA:3.40.50.720 185 334 1.3E-54 T 14-10-2018 AMIS_57840 1435447a58ccf2c1ad9a01048c8062fe 350 Pfam PF13478 XdhC Rossmann domain 186 328 7.4E-43 T 14-10-2018 IPR027051 XdhC Rossmann domain AMIS_860 a8b7374e86002e77c2f4b51925e8522f 146 Gene3D G3DSA:1.10.1660.10 3 121 1.2E-22 T 14-10-2018 AMIS_860 a8b7374e86002e77c2f4b51925e8522f 146 Pfam PF13411 MerR HTH family regulatory protein 19 83 3.9E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_860 a8b7374e86002e77c2f4b51925e8522f 146 SUPERFAMILY SSF46955 19 122 4.4E-20 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily AMIS_860 a8b7374e86002e77c2f4b51925e8522f 146 SMART SM00422 17 86 2.9E-21 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_57040 13f7786533188228e344cfb3a7c26fb7 389 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 8 119 1.1E-34 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMIS_57040 13f7786533188228e344cfb3a7c26fb7 389 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 125 137 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AMIS_57040 13f7786533188228e344cfb3a7c26fb7 389 Gene3D G3DSA:1.10.540.10 1 120 1.3E-41 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMIS_57040 13f7786533188228e344cfb3a7c26fb7 389 Gene3D G3DSA:1.20.140.10 240 387 2.0E-52 T 14-10-2018 AMIS_57040 13f7786533188228e344cfb3a7c26fb7 389 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 219 2.8E-27 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMIS_57040 13f7786533188228e344cfb3a7c26fb7 389 SUPERFAMILY SSF47203 232 383 3.38E-55 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMIS_57040 13f7786533188228e344cfb3a7c26fb7 389 Gene3D G3DSA:2.40.110.10 123 239 1.7E-40 T 14-10-2018 AMIS_57040 13f7786533188228e344cfb3a7c26fb7 389 SUPERFAMILY SSF56645 2 230 6.28E-81 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMIS_57040 13f7786533188228e344cfb3a7c26fb7 389 PIRSF PIRSF016578 138 387 2.5E-16 T 14-10-2018 AMIS_57040 13f7786533188228e344cfb3a7c26fb7 389 PIRSF PIRSF016578 7 117 9.3E-9 T 14-10-2018 AMIS_57040 13f7786533188228e344cfb3a7c26fb7 389 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 233 382 1.6E-47 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMIS_57040 13f7786533188228e344cfb3a7c26fb7 389 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 340 359 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AMIS_43120 78f997bb7818a447677bda25279ff0f8 765 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 42 217 7.7E-10 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AMIS_43120 78f997bb7818a447677bda25279ff0f8 765 SUPERFAMILY SSF52922 618 764 5.76E-21 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AMIS_43120 78f997bb7818a447677bda25279ff0f8 765 SUPERFAMILY SSF52518 6 365 1.82E-68 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold AMIS_43120 78f997bb7818a447677bda25279ff0f8 765 Gene3D G3DSA:3.40.50.970 387 613 1.4E-73 T 14-10-2018 AMIS_43120 78f997bb7818a447677bda25279ff0f8 765 SMART SM00861 400 605 2.2E-6 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AMIS_43120 78f997bb7818a447677bda25279ff0f8 765 Gene3D G3DSA:3.40.50.970 2 383 2.0E-79 T 14-10-2018 AMIS_43120 78f997bb7818a447677bda25279ff0f8 765 SUPERFAMILY SSF52518 394 602 4.12E-48 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold AMIS_43120 78f997bb7818a447677bda25279ff0f8 765 Gene3D G3DSA:3.40.50.920 625 762 2.0E-18 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AMIS_43120 78f997bb7818a447677bda25279ff0f8 765 PIRSF PIRSF000156 5 765 3.5E-68 T 14-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 AMIS_57600 1b50eed94b734045ceaf5e9e5305ba64 415 Gene3D G3DSA:2.130.10.10 251 414 4.7E-11 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_57600 1b50eed94b734045ceaf5e9e5305ba64 415 Gene3D G3DSA:2.130.10.10 33 226 3.4E-6 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_57600 1b50eed94b734045ceaf5e9e5305ba64 415 SUPERFAMILY SSF50969 56 402 9.42E-16 T 14-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like AMIS_2880 9563409d2fb24c5389c7b5ba25dc2d64 438 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 16 418 1.6E-179 T 14-10-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_2880 9563409d2fb24c5389c7b5ba25dc2d64 438 Gene3D G3DSA:1.20.1440.230 335 432 1.2E-29 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_2880 9563409d2fb24c5389c7b5ba25dc2d64 438 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 339 417 4.5E-30 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_2880 9563409d2fb24c5389c7b5ba25dc2d64 438 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 55 226 3.5E-47 T 14-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_2880 9563409d2fb24c5389c7b5ba25dc2d64 438 Gene3D G3DSA:3.40.50.11540 60 238 1.7E-78 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_2880 9563409d2fb24c5389c7b5ba25dc2d64 438 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 348 359 - T 14-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_2880 9563409d2fb24c5389c7b5ba25dc2d64 438 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 174 189 - T 14-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_2880 9563409d2fb24c5389c7b5ba25dc2d64 438 SUPERFAMILY SSF142019 12 246 1.96E-87 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_2880 9563409d2fb24c5389c7b5ba25dc2d64 438 SUPERFAMILY SSF140490 332 425 5.62E-35 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_2880 9563409d2fb24c5389c7b5ba25dc2d64 438 SUPERFAMILY SSF142984 249 330 9.94E-22 T 14-10-2018 AMIS_2880 9563409d2fb24c5389c7b5ba25dc2d64 438 SMART SM00928 335 380 5.6E-23 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_2880 9563409d2fb24c5389c7b5ba25dc2d64 438 Pfam PF10531 SLBB domain 251 298 7.3E-8 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_2880 9563409d2fb24c5389c7b5ba25dc2d64 438 Gene3D G3DSA:3.10.20.600 239 331 7.7E-28 T 14-10-2018 AMIS_65270 c32674a27ba36d4742a52fe1c9e815b4 2133 Gene3D G3DSA:2.60.40.10 1717 1806 3.3E-9 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_65270 c32674a27ba36d4742a52fe1c9e815b4 2133 TIGRFAM TIGR02913 HAF_rpt: probable extracellular repeat, HAF family 296 332 1.1E-6 T 14-10-2018 IPR014262 Extracellular HAF AMIS_65270 c32674a27ba36d4742a52fe1c9e815b4 2133 SUPERFAMILY SSF49299 1677 1806 6.67E-8 T 14-10-2018 IPR035986 PKD domain superfamily AMIS_65270 c32674a27ba36d4742a52fe1c9e815b4 2133 SMART SM00089 1726 1806 0.13 T 14-10-2018 IPR022409 PKD/Chitinase domain AMIS_65270 c32674a27ba36d4742a52fe1c9e815b4 2133 SMART SM00089 1814 1900 10.0 T 14-10-2018 IPR022409 PKD/Chitinase domain AMIS_65270 c32674a27ba36d4742a52fe1c9e815b4 2133 SMART SM00089 1909 1997 1.1 T 14-10-2018 IPR022409 PKD/Chitinase domain AMIS_65270 c32674a27ba36d4742a52fe1c9e815b4 2133 SUPERFAMILY SSF49299 1899 1997 4.71E-7 T 14-10-2018 IPR035986 PKD domain superfamily AMIS_65270 c32674a27ba36d4742a52fe1c9e815b4 2133 SUPERFAMILY SSF49299 1810 1900 9.42E-7 T 14-10-2018 IPR035986 PKD domain superfamily AMIS_65270 c32674a27ba36d4742a52fe1c9e815b4 2133 Pfam PF01345 Domain of unknown function DUF11 1394 1480 2.1E-6 T 14-10-2018 IPR001434 Domain of unknown function DUF11 AMIS_65270 c32674a27ba36d4742a52fe1c9e815b4 2133 Gene3D G3DSA:2.60.40.10 1516 1615 8.4E-12 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_65270 c32674a27ba36d4742a52fe1c9e815b4 2133 Gene3D G3DSA:2.60.40.10 1898 1994 7.2E-9 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_65270 c32674a27ba36d4742a52fe1c9e815b4 2133 Gene3D G3DSA:2.60.40.10 1807 1897 3.5E-11 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_65270 c32674a27ba36d4742a52fe1c9e815b4 2133 Pfam PF01674 Lipase (class 2) 500 601 4.7E-7 T 14-10-2018 IPR002918 Lipase EstA/Esterase EstB GO:0016787 KEGG: 00561+3.1.1.3|MetaCyc: PWY-6857 AMIS_65270 c32674a27ba36d4742a52fe1c9e815b4 2133 SUPERFAMILY SSF53474 500 736 2.08E-21 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_65270 c32674a27ba36d4742a52fe1c9e815b4 2133 Gene3D G3DSA:3.40.50.1820 497 734 5.7E-31 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_65270 c32674a27ba36d4742a52fe1c9e815b4 2133 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 1398 1435 4.5E-7 T 14-10-2018 IPR001434 Domain of unknown function DUF11 AMIS_36290 4517a80c171184db10213f82e6ba438f 330 SUPERFAMILY SSF46689 4 109 7.35E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_36290 4517a80c171184db10213f82e6ba438f 330 Pfam PF00665 Integrase core domain 131 281 1.6E-40 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AMIS_36290 4517a80c171184db10213f82e6ba438f 330 SUPERFAMILY SSF53098 183 324 5.69E-35 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily AMIS_36290 4517a80c171184db10213f82e6ba438f 330 Gene3D G3DSA:3.30.420.10 175 324 4.4E-30 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMIS_36290 4517a80c171184db10213f82e6ba438f 330 Pfam PF13011 leucine-zipper of insertion element IS481 1 83 1.4E-16 T 14-10-2018 IPR024967 DNA-binding domain, IS481-type AMIS_22430 6b403224d02137d20aeed62742256e41 530 Gene3D G3DSA:3.30.420.40 266 527 6.3E-62 T 14-10-2018 AMIS_22430 6b403224d02137d20aeed62742256e41 530 SUPERFAMILY SSF53067 7 266 1.82E-48 T 14-10-2018 AMIS_22430 6b403224d02137d20aeed62742256e41 530 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 277 459 4.8E-29 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AMIS_22430 6b403224d02137d20aeed62742256e41 530 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 7 264 8.0E-35 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AMIS_22430 6b403224d02137d20aeed62742256e41 530 Gene3D G3DSA:3.30.420.40 2 256 2.2E-63 T 14-10-2018 AMIS_22430 6b403224d02137d20aeed62742256e41 530 PIRSF PIRSF000538 5 527 9.2E-91 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AMIS_22430 6b403224d02137d20aeed62742256e41 530 SUPERFAMILY SSF53067 269 512 4.58E-50 T 14-10-2018 AMIS_66810 2e0fb8f748fd4b7283bcc33990131032 297 PRINTS PR00834 HtrA/DegQ protease family signature 229 246 6.1E-29 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMIS_66810 2e0fb8f748fd4b7283bcc33990131032 297 PRINTS PR00834 HtrA/DegQ protease family signature 131 143 6.1E-29 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMIS_66810 2e0fb8f748fd4b7283bcc33990131032 297 PRINTS PR00834 HtrA/DegQ protease family signature 152 172 6.1E-29 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMIS_66810 2e0fb8f748fd4b7283bcc33990131032 297 PRINTS PR00834 HtrA/DegQ protease family signature 251 268 6.1E-29 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMIS_66810 2e0fb8f748fd4b7283bcc33990131032 297 PRINTS PR00834 HtrA/DegQ protease family signature 192 216 6.1E-29 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMIS_66810 2e0fb8f748fd4b7283bcc33990131032 297 Pfam PF13365 Trypsin-like peptidase domain 122 258 4.7E-25 T 14-10-2018 AMIS_66810 2e0fb8f748fd4b7283bcc33990131032 297 Gene3D G3DSA:2.40.10.10 75 178 2.0E-19 T 14-10-2018 AMIS_66810 2e0fb8f748fd4b7283bcc33990131032 297 SUPERFAMILY SSF50494 89 283 3.81E-44 T 14-10-2018 IPR009003 Peptidase S1, PA clan AMIS_66810 2e0fb8f748fd4b7283bcc33990131032 297 Gene3D G3DSA:2.40.10.10 188 285 2.4E-30 T 14-10-2018 AMIS_71990 9a181f3075556a7b095e11151b774989 78 Pfam PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter 26 74 6.9E-7 T 14-10-2018 IPR032820 Putative F0F1-ATPase subunit, Ca2+/Mg2+ transporter AMIS_15980 f9e2b5d2a35a7f5aa0cfdea74a0ca07f 169 TIGRFAM TIGR02983 SigE-fam_strep: RNA polymerase sigma-70 factor, sigma-E family 5 162 2.5E-47 T 14-10-2018 IPR014325 RNA polymerase sigma-E factor, actinobacteria GO:0016987 AMIS_15980 f9e2b5d2a35a7f5aa0cfdea74a0ca07f 169 Gene3D G3DSA:1.10.10.10 84 163 5.1E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_15980 f9e2b5d2a35a7f5aa0cfdea74a0ca07f 169 Gene3D G3DSA:1.10.1740.10 1 83 2.6E-9 T 14-10-2018 AMIS_15980 f9e2b5d2a35a7f5aa0cfdea74a0ca07f 169 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 9 158 2.6E-21 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_15980 f9e2b5d2a35a7f5aa0cfdea74a0ca07f 169 Pfam PF08281 Sigma-70, region 4 105 156 4.0E-15 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_15980 f9e2b5d2a35a7f5aa0cfdea74a0ca07f 169 Pfam PF04542 Sigma-70 region 2 19 80 1.0E-7 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_15980 f9e2b5d2a35a7f5aa0cfdea74a0ca07f 169 SUPERFAMILY SSF88946 7 94 1.49E-13 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_15980 f9e2b5d2a35a7f5aa0cfdea74a0ca07f 169 SUPERFAMILY SSF88659 102 161 2.99E-15 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_67770 81dc37193d360e3634109e04e5ccf752 368 SUPERFAMILY SSF56281 102 353 3.8E-35 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMIS_67770 81dc37193d360e3634109e04e5ccf752 368 Gene3D G3DSA:3.60.15.10 94 357 2.7E-83 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMIS_67770 81dc37193d360e3634109e04e5ccf752 368 Pfam PF12706 Beta-lactamase superfamily domain 119 315 1.6E-51 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMIS_67770 81dc37193d360e3634109e04e5ccf752 368 PIRSF PIRSF038896 8 365 1.5E-93 T 14-10-2018 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 Reactome: R-HSA-2466712 AMIS_14490 ba576fdd78e476a07e5eb1bd7b2667a1 228 SUPERFAMILY SSF46785 152 226 5.2E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_14490 ba576fdd78e476a07e5eb1bd7b2667a1 228 Gene3D G3DSA:2.60.120.10 8 152 1.2E-35 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMIS_14490 ba576fdd78e476a07e5eb1bd7b2667a1 228 Pfam PF13545 Crp-like helix-turn-helix domain 155 223 5.0E-16 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMIS_14490 ba576fdd78e476a07e5eb1bd7b2667a1 228 Gene3D G3DSA:1.10.10.10 153 225 3.8E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_14490 ba576fdd78e476a07e5eb1bd7b2667a1 228 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 85 102 - T 14-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site AMIS_14490 ba576fdd78e476a07e5eb1bd7b2667a1 228 SMART SM00100 17 135 1.3E-24 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain AMIS_14490 ba576fdd78e476a07e5eb1bd7b2667a1 228 SMART SM00419 169 217 2.0E-7 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMIS_14490 ba576fdd78e476a07e5eb1bd7b2667a1 228 Pfam PF00027 Cyclic nucleotide-binding domain 35 122 9.9E-21 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain AMIS_14490 ba576fdd78e476a07e5eb1bd7b2667a1 228 SUPERFAMILY SSF51206 10 145 9.95E-32 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like AMIS_28220 86d710c0cc457fdd405be522fffef3e2 490 TIGRFAM TIGR03769 P_ac_wall_RPT: actinobacterial surface-anchored protein domain 177 218 8.7E-15 T 14-10-2018 IPR022435 Surface-anchored repeat, actinobacteria AMIS_52880 af7cf2ab6da8babc0d50ecc25a20a771 346 Pfam PF01032 FecCD transport family 37 339 8.7E-82 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AMIS_52880 af7cf2ab6da8babc0d50ecc25a20a771 346 Gene3D G3DSA:1.10.3470.10 23 345 6.3E-89 T 14-10-2018 IPR037294 ABC transporter, BtuC-like AMIS_52880 af7cf2ab6da8babc0d50ecc25a20a771 346 SUPERFAMILY SSF81345 21 339 6.93E-71 T 14-10-2018 IPR037294 ABC transporter, BtuC-like AMIS_42260 16cb4810ed53d9b0f8e6e6456c91af32 95 Gene3D G3DSA:1.10.10.10 2 90 2.5E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_42260 16cb4810ed53d9b0f8e6e6456c91af32 95 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 9 24 1.8E-8 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_42260 16cb4810ed53d9b0f8e6e6456c91af32 95 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 63 78 1.8E-8 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_42260 16cb4810ed53d9b0f8e6e6456c91af32 95 SMART SM00418 7 92 4.2E-15 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_42260 16cb4810ed53d9b0f8e6e6456c91af32 95 Pfam PF12840 Helix-turn-helix domain 6 72 1.1E-18 T 14-10-2018 AMIS_42260 16cb4810ed53d9b0f8e6e6456c91af32 95 SUPERFAMILY SSF46785 6 91 1.93E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_41470 a9619ebcdc6bfb8ed517b725637a70ef 457 Pfam PF11700 Vacuole effluxer Atg22 like 12 447 1.7E-103 T 14-10-2018 IPR024671 Autophagy-related protein 22-like AMIS_41470 a9619ebcdc6bfb8ed517b725637a70ef 457 Gene3D G3DSA:1.20.1250.20 24 235 7.2E-9 T 14-10-2018 AMIS_41470 a9619ebcdc6bfb8ed517b725637a70ef 457 SUPERFAMILY SSF103473 24 443 1.57E-36 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_41470 a9619ebcdc6bfb8ed517b725637a70ef 457 Gene3D G3DSA:1.20.1250.20 253 445 4.3E-17 T 14-10-2018 AMIS_23470 9b075494c10f889e7527eaeba3ad5306 383 SUPERFAMILY SSF51055 319 383 2.16E-6 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AMIS_23470 9b075494c10f889e7527eaeba3ad5306 383 SUPERFAMILY SSF49899 34 265 1.48E-16 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily AMIS_23470 9b075494c10f889e7527eaeba3ad5306 383 Gene3D G3DSA:2.10.10.20 319 383 8.8E-9 T 14-10-2018 AMIS_23470 9b075494c10f889e7527eaeba3ad5306 383 Gene3D G3DSA:2.60.120.200 44 268 3.7E-15 T 14-10-2018 AMIS_67690 d63454471678dd6235cf71d10dd970c1 579 Gene3D G3DSA:3.40.50.1220 183 334 1.8E-40 T 14-10-2018 AMIS_67690 d63454471678dd6235cf71d10dd970c1 579 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 7 170 4.6E-41 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AMIS_67690 d63454471678dd6235cf71d10dd970c1 579 SUPERFAMILY SSF52467 186 345 1.64E-38 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AMIS_67690 d63454471678dd6235cf71d10dd970c1 579 SUPERFAMILY SSF52518 360 544 2.32E-57 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold AMIS_67690 d63454471678dd6235cf71d10dd970c1 579 SUPERFAMILY SSF52518 4 170 3.93E-40 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold AMIS_67690 d63454471678dd6235cf71d10dd970c1 579 Gene3D G3DSA:3.40.50.970 4 180 1.2E-53 T 14-10-2018 AMIS_67690 d63454471678dd6235cf71d10dd970c1 579 Gene3D G3DSA:3.40.50.970 355 576 6.5E-61 T 14-10-2018 AMIS_67690 d63454471678dd6235cf71d10dd970c1 579 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 383 529 7.2E-38 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AMIS_67690 d63454471678dd6235cf71d10dd970c1 579 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 194 321 1.3E-26 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AMIS_67690 d63454471678dd6235cf71d10dd970c1 579 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 420 439 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AMIS_54680 b2b152e6fe305f3e667b0eba903cc93b 168 Pfam PF00578 AhpC/TSA family 34 147 4.7E-13 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AMIS_54680 b2b152e6fe305f3e667b0eba903cc93b 168 ProSitePatterns PS00194 Thioredoxin family active site. 59 77 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AMIS_54680 b2b152e6fe305f3e667b0eba903cc93b 168 Gene3D G3DSA:3.40.30.10 31 165 7.3E-27 T 14-10-2018 AMIS_54680 b2b152e6fe305f3e667b0eba903cc93b 168 SUPERFAMILY SSF52833 34 154 4.07E-26 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMIS_44960 d891fae8c9b1b241dc674114c1328415 1233 Gene3D G3DSA:2.20.140.10 1 72 4.6E-17 T 14-10-2018 IPR036930 WGR domain superfamily AMIS_44960 d891fae8c9b1b241dc674114c1328415 1233 Pfam PF05406 WGR domain 10 67 3.7E-11 T 14-10-2018 IPR008893 WGR domain AMIS_44960 d891fae8c9b1b241dc674114c1328415 1233 Pfam PF13569 Domain of unknown function (DUF4132) 968 1151 2.2E-53 T 14-10-2018 IPR025406 Domain of unknown function DUF4132 AMIS_44960 d891fae8c9b1b241dc674114c1328415 1233 SMART SM00773 1 71 7.5E-8 T 14-10-2018 IPR008893 WGR domain AMIS_44960 d891fae8c9b1b241dc674114c1328415 1233 SUPERFAMILY SSF142921 23 66 1.57E-5 T 14-10-2018 IPR036930 WGR domain superfamily AMIS_68380 0abf0b4e99a9da186d0b8431ea4d4d5b 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 216 3.9E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_68380 0abf0b4e99a9da186d0b8431ea4d4d5b 224 Pfam PF00072 Response regulator receiver domain 3 113 1.0E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_68380 0abf0b4e99a9da186d0b8431ea4d4d5b 224 Gene3D G3DSA:1.10.10.10 123 221 1.0E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_68380 0abf0b4e99a9da186d0b8431ea4d4d5b 224 SMART SM00448 1 112 1.8E-36 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_68380 0abf0b4e99a9da186d0b8431ea4d4d5b 224 SMART SM00862 145 217 2.5E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_68380 0abf0b4e99a9da186d0b8431ea4d4d5b 224 Gene3D G3DSA:3.40.50.2300 1 121 1.1E-35 T 14-10-2018 AMIS_68380 0abf0b4e99a9da186d0b8431ea4d4d5b 224 SUPERFAMILY SSF52172 1 172 1.96E-36 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_26950 5106b9b061a1f63d4ae01f6569b37f35 1110 Pfam PF16995 Transmembrane region of lysyl-tRNA synthetase 14 239 8.7E-52 T 14-10-2018 IPR031553 Lysyl-tRNA synthetase, N-terminal transmembrane region KEGG: 00970+6.1.1.6 AMIS_26950 5106b9b061a1f63d4ae01f6569b37f35 1110 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 259 558 6.9E-90 T 14-10-2018 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal AMIS_26950 5106b9b061a1f63d4ae01f6569b37f35 1110 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 625 1105 33.993 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AMIS_26950 5106b9b061a1f63d4ae01f6569b37f35 1110 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 619 1103 2.3E-140 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AMIS_26950 5106b9b061a1f63d4ae01f6569b37f35 1110 Pfam PF00152 tRNA synthetases class II (D, K and N) 767 1101 1.7E-70 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMIS_26950 5106b9b061a1f63d4ae01f6569b37f35 1110 SUPERFAMILY SSF50249 618 758 1.26E-31 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMIS_26950 5106b9b061a1f63d4ae01f6569b37f35 1110 PRINTS PR00982 Lysyl-tRNA synthetase signature 865 882 1.6E-29 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AMIS_26950 5106b9b061a1f63d4ae01f6569b37f35 1110 PRINTS PR00982 Lysyl-tRNA synthetase signature 802 812 1.6E-29 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AMIS_26950 5106b9b061a1f63d4ae01f6569b37f35 1110 PRINTS PR00982 Lysyl-tRNA synthetase signature 818 834 1.6E-29 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AMIS_26950 5106b9b061a1f63d4ae01f6569b37f35 1110 PRINTS PR00982 Lysyl-tRNA synthetase signature 988 1004 1.6E-29 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AMIS_26950 5106b9b061a1f63d4ae01f6569b37f35 1110 PRINTS PR00982 Lysyl-tRNA synthetase signature 847 860 1.6E-29 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AMIS_26950 5106b9b061a1f63d4ae01f6569b37f35 1110 SUPERFAMILY SSF55681 765 1103 1.41E-99 T 14-10-2018 AMIS_26950 5106b9b061a1f63d4ae01f6569b37f35 1110 Pfam PF01336 OB-fold nucleic acid binding domain 671 748 2.0E-11 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AMIS_26950 5106b9b061a1f63d4ae01f6569b37f35 1110 Gene3D G3DSA:2.40.50.140 620 757 5.1E-34 T 14-10-2018 AMIS_26950 5106b9b061a1f63d4ae01f6569b37f35 1110 Gene3D G3DSA:3.30.930.10 761 1107 1.7E-108 T 14-10-2018 AMIS_18660 6874ee6409e4a99b9188bbe7fdab8784 382 Pfam PF13439 Glycosyltransferase Family 4 14 180 1.5E-23 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AMIS_18660 6874ee6409e4a99b9188bbe7fdab8784 382 Pfam PF00534 Glycosyl transferases group 1 195 345 2.8E-25 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 AMIS_18660 6874ee6409e4a99b9188bbe7fdab8784 382 SUPERFAMILY SSF53756 2 366 1.57E-73 T 14-10-2018 AMIS_18660 6874ee6409e4a99b9188bbe7fdab8784 382 Gene3D G3DSA:3.40.50.2000 196 350 4.0E-33 T 14-10-2018 AMIS_18660 6874ee6409e4a99b9188bbe7fdab8784 382 Gene3D G3DSA:3.40.50.2000 1 195 5.1E-30 T 14-10-2018 AMIS_72670 e5c02caa1dbfbdae78004a425ed4b16d 127 SMART SM00422 1 69 7.0E-26 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_72670 e5c02caa1dbfbdae78004a425ed4b16d 127 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.3E-7 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_72670 e5c02caa1dbfbdae78004a425ed4b16d 127 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 36 56 1.3E-7 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_72670 e5c02caa1dbfbdae78004a425ed4b16d 127 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 1.3E-7 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_72670 e5c02caa1dbfbdae78004a425ed4b16d 127 Gene3D G3DSA:1.10.1660.10 1 125 1.6E-30 T 14-10-2018 AMIS_72670 e5c02caa1dbfbdae78004a425ed4b16d 127 SUPERFAMILY SSF46955 1 114 9.16E-28 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily AMIS_72670 e5c02caa1dbfbdae78004a425ed4b16d 127 Pfam PF13411 MerR HTH family regulatory protein 2 64 2.7E-19 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_61630 94047665ffddde96661b21edd1c9dbd7 748 Gene3D G3DSA:3.40.50.1700 355 631 1.1E-66 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 AMIS_61630 94047665ffddde96661b21edd1c9dbd7 748 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 370 629 5.5E-47 T 14-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 AMIS_61630 94047665ffddde96661b21edd1c9dbd7 748 Pfam PF14310 Fibronectin type III-like domain 666 735 3.1E-16 T 14-10-2018 IPR026891 Fibronectin type III-like domain AMIS_61630 94047665ffddde96661b21edd1c9dbd7 748 SMART SM01217 666 735 1.7E-22 T 14-10-2018 IPR026891 Fibronectin type III-like domain AMIS_61630 94047665ffddde96661b21edd1c9dbd7 748 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 26 331 1.2E-69 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMIS_61630 94047665ffddde96661b21edd1c9dbd7 748 SUPERFAMILY SSF51445 5 369 1.02E-110 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_61630 94047665ffddde96661b21edd1c9dbd7 748 SUPERFAMILY SSF52279 370 631 1.1E-45 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 AMIS_61630 94047665ffddde96661b21edd1c9dbd7 748 PRINTS PR00133 Glycosyl hydrolase family 3 signature 144 160 2.5E-24 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMIS_61630 94047665ffddde96661b21edd1c9dbd7 748 PRINTS PR00133 Glycosyl hydrolase family 3 signature 98 117 2.5E-24 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMIS_61630 94047665ffddde96661b21edd1c9dbd7 748 PRINTS PR00133 Glycosyl hydrolase family 3 signature 74 90 2.5E-24 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMIS_61630 94047665ffddde96661b21edd1c9dbd7 748 PRINTS PR00133 Glycosyl hydrolase family 3 signature 251 269 2.5E-24 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMIS_61630 94047665ffddde96661b21edd1c9dbd7 748 PRINTS PR00133 Glycosyl hydrolase family 3 signature 181 197 2.5E-24 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMIS_61630 94047665ffddde96661b21edd1c9dbd7 748 Gene3D G3DSA:2.60.40.10 633 742 4.7E-23 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_61630 94047665ffddde96661b21edd1c9dbd7 748 Gene3D G3DSA:3.20.20.300 3 351 7.8E-118 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 AMIS_81020 48e2b1dc389e0fa5ecd3adc7ad281f69 344 SUPERFAMILY SSF50969 119 312 3.37E-13 T 14-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like AMIS_81020 48e2b1dc389e0fa5ecd3adc7ad281f69 344 Gene3D G3DSA:2.130.10.10 106 324 8.8E-8 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_39400 4498d66042567158228b9db621d1cee6 735 SUPERFAMILY SSF55073 333 466 2.28E-27 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_39400 4498d66042567158228b9db621d1cee6 735 SUPERFAMILY SSF141868 482 728 3.4E-80 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_39400 4498d66042567158228b9db621d1cee6 735 SMART SM00052 475 722 2.0E-106 T 14-10-2018 IPR001633 EAL domain AMIS_39400 4498d66042567158228b9db621d1cee6 735 Pfam PF00563 EAL domain 481 717 2.8E-69 T 14-10-2018 IPR001633 EAL domain AMIS_39400 4498d66042567158228b9db621d1cee6 735 Pfam PF00990 Diguanylate cyclase, GGDEF domain 328 454 3.4E-22 T 14-10-2018 IPR000160 GGDEF domain AMIS_39400 4498d66042567158228b9db621d1cee6 735 Gene3D G3DSA:3.30.70.270 326 478 7.5E-30 T 14-10-2018 AMIS_39400 4498d66042567158228b9db621d1cee6 735 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 325 413 4.2E-18 T 14-10-2018 IPR000160 GGDEF domain AMIS_39400 4498d66042567158228b9db621d1cee6 735 Gene3D G3DSA:3.20.20.450 479 734 3.9E-91 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_39400 4498d66042567158228b9db621d1cee6 735 SMART SM00267 317 464 8.3E-24 T 14-10-2018 IPR000160 GGDEF domain AMIS_56600 dd640a9d8b5fcbc8cee004787c431cbf 315 Gene3D G3DSA:3.40.50.300 1 315 1.4E-85 T 14-10-2018 AMIS_56600 dd640a9d8b5fcbc8cee004787c431cbf 315 Pfam PF00005 ABC transporter 19 175 3.2E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_56600 dd640a9d8b5fcbc8cee004787c431cbf 315 SMART SM00382 28 225 1.6E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_56600 dd640a9d8b5fcbc8cee004787c431cbf 315 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 225 309 9.1E-17 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMIS_56600 dd640a9d8b5fcbc8cee004787c431cbf 315 SUPERFAMILY SSF52540 3 247 8.61E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_56600 dd640a9d8b5fcbc8cee004787c431cbf 315 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 227 291 2.1E-14 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMIS_77400 f4e18e6c3c46cc3318722d95586596cf 418 SUPERFAMILY SSF50998 94 355 6.67E-7 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AMIS_77400 f4e18e6c3c46cc3318722d95586596cf 418 Pfam PF13360 PQQ-like domain 252 396 2.1E-6 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat AMIS_77400 f4e18e6c3c46cc3318722d95586596cf 418 Gene3D G3DSA:2.130.10.10 26 415 1.4E-9 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_78090 f9c92ae671e2bde29a362e6ca0241665 168 Gene3D G3DSA:3.90.80.10 1 162 3.7E-63 T 14-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AMIS_78090 f9c92ae671e2bde29a362e6ca0241665 168 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 52 58 - T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AMIS_78090 f9c92ae671e2bde29a362e6ca0241665 168 Pfam PF00719 Inorganic pyrophosphatase 5 157 3.7E-51 T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AMIS_78090 f9c92ae671e2bde29a362e6ca0241665 168 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 1 158 31.51 T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AMIS_78090 f9c92ae671e2bde29a362e6ca0241665 168 SUPERFAMILY SSF50324 3 156 3.14E-54 T 14-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AMIS_78400 98c921be628eae1a01fb5c95db9c6203 574 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 254 267 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AMIS_78400 98c921be628eae1a01fb5c95db9c6203 574 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 50 66 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AMIS_78400 98c921be628eae1a01fb5c95db9c6203 574 Pfam PF08502 LeuA allosteric (dimerisation) domain 443 573 4.1E-28 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AMIS_78400 98c921be628eae1a01fb5c95db9c6203 574 Pfam PF00682 HMGL-like 43 324 4.2E-77 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 AMIS_78400 98c921be628eae1a01fb5c95db9c6203 574 SUPERFAMILY SSF51569 32 341 2.56E-99 T 14-10-2018 AMIS_78400 98c921be628eae1a01fb5c95db9c6203 574 SUPERFAMILY SSF110921 477 573 4.18E-33 T 14-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AMIS_78400 98c921be628eae1a01fb5c95db9c6203 574 TIGRFAM TIGR00970 leuA_yeast: 2-isopropylmalate synthase 15 573 6.1E-261 T 14-10-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AMIS_78400 98c921be628eae1a01fb5c95db9c6203 574 Gene3D G3DSA:3.20.20.70 21 397 1.0E-155 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_78400 98c921be628eae1a01fb5c95db9c6203 574 SUPERFAMILY SSF89000 409 458 9.42E-15 T 14-10-2018 AMIS_78400 98c921be628eae1a01fb5c95db9c6203 574 SMART SM00917 443 574 2.6E-32 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AMIS_78400 98c921be628eae1a01fb5c95db9c6203 574 Gene3D G3DSA:3.30.160.270 398 573 1.6E-57 T 14-10-2018 AMIS_78400 98c921be628eae1a01fb5c95db9c6203 574 Hamap MF_00572 2-isopropylmalate synthase [leuA]. 15 574 54.628 T 14-10-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AMIS_2280 76e025114e2c1c0ec28b597088d2d123 573 Pfam PF01935 Domain of unknown function DUF87 259 332 3.4E-8 T 14-10-2018 IPR002789 Helicase HerA, central domain AMIS_2280 76e025114e2c1c0ec28b597088d2d123 573 SUPERFAMILY SSF52540 236 358 1.03E-16 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_2280 76e025114e2c1c0ec28b597088d2d123 573 Gene3D G3DSA:3.40.50.300 223 498 9.4E-18 T 14-10-2018 AMIS_68790 e68255963df99c744f4dd94e791809cd 140 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 139 7.6E-38 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 AMIS_68790 e68255963df99c744f4dd94e791809cd 140 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 140 28.297 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 AMIS_68790 e68255963df99c744f4dd94e791809cd 140 Gene3D G3DSA:3.50.80.10 1 140 5.5E-40 T 14-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily AMIS_68790 e68255963df99c744f4dd94e791809cd 140 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 139 6.5E-46 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 AMIS_68790 e68255963df99c744f4dd94e791809cd 140 SUPERFAMILY SSF69500 1 139 3.4E-42 T 14-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily AMIS_5510 5e0855bd892a0c1d3cbd945a2a6a765a 226 SUPERFAMILY SSF46689 7 87 4.22E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_5510 5e0855bd892a0c1d3cbd945a2a6a765a 226 Gene3D G3DSA:1.10.357.10 2 224 2.2E-69 T 14-10-2018 AMIS_5510 5e0855bd892a0c1d3cbd945a2a6a765a 226 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 63 4.9E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_5510 5e0855bd892a0c1d3cbd945a2a6a765a 226 SUPERFAMILY SSF48498 87 217 5.56E-22 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_38880 6c4110766e184477ac97c6cb13c890bb 679 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 23 121 5.5E-10 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AMIS_38880 6c4110766e184477ac97c6cb13c890bb 679 SMART SM01008 23 124 8.0E-16 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AMIS_38880 6c4110766e184477ac97c6cb13c890bb 679 Gene3D G3DSA:3.30.365.10 172 262 1.3E-61 T 14-10-2018 AMIS_38880 6c4110766e184477ac97c6cb13c890bb 679 Gene3D G3DSA:3.30.365.10 159 367 1.3E-61 T 14-10-2018 AMIS_38880 6c4110766e184477ac97c6cb13c890bb 679 SUPERFAMILY SSF54665 8 124 1.57E-23 T 14-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily AMIS_38880 6c4110766e184477ac97c6cb13c890bb 679 SUPERFAMILY SSF56003 124 676 2.22E-156 T 14-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 AMIS_38880 6c4110766e184477ac97c6cb13c890bb 679 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 530 617 1.7E-22 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMIS_38880 6c4110766e184477ac97c6cb13c890bb 679 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 159 512 7.0E-91 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMIS_38880 6c4110766e184477ac97c6cb13c890bb 679 Gene3D G3DSA:3.30.365.20 516 679 4.9E-51 T 14-10-2018 AMIS_38880 6c4110766e184477ac97c6cb13c890bb 679 Gene3D G3DSA:3.30.365.20 384 515 4.4E-22 T 14-10-2018 AMIS_38880 6c4110766e184477ac97c6cb13c890bb 679 Gene3D G3DSA:3.90.1170.50 2 123 1.7E-16 T 14-10-2018 AMIS_51210 6743479fb82c4dd73c9e555621dc7cd6 429 Pfam PF00553 Cellulose binding domain 333 423 1.1E-20 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 AMIS_51210 6743479fb82c4dd73c9e555621dc7cd6 429 Gene3D G3DSA:2.60.40.290 331 428 7.0E-25 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 AMIS_51210 6743479fb82c4dd73c9e555621dc7cd6 429 Gene3D G3DSA:2.70.50.50 78 276 2.3E-70 T 14-10-2018 AMIS_51210 6743479fb82c4dd73c9e555621dc7cd6 429 SUPERFAMILY SSF81296 78 275 2.94E-43 T 14-10-2018 IPR014756 Immunoglobulin E-set AMIS_51210 6743479fb82c4dd73c9e555621dc7cd6 429 SMART SM00637 333 426 8.3E-25 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 AMIS_51210 6743479fb82c4dd73c9e555621dc7cd6 429 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 78 271 6.4E-42 T 14-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal AMIS_51210 6743479fb82c4dd73c9e555621dc7cd6 429 SUPERFAMILY SSF49384 328 423 5.72E-24 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 AMIS_48330 dcd75252e135db9462890149ab7f1f6b 340 SUPERFAMILY SSF53474 105 333 3.72E-22 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_48330 dcd75252e135db9462890149ab7f1f6b 340 Pfam PF00756 Putative esterase 123 329 2.5E-9 T 14-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 AMIS_48330 dcd75252e135db9462890149ab7f1f6b 340 Gene3D G3DSA:3.40.50.1820 92 336 1.5E-34 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_29400 97ac724c0143f2705085ef042cd132f6 882 SUPERFAMILY SSF46894 818 876 1.84E-16 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_29400 97ac724c0143f2705085ef042cd132f6 882 ProSitePatterns PS00622 LuxR-type HTH domain signature. 840 867 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_29400 97ac724c0143f2705085ef042cd132f6 882 SMART SM00421 823 880 3.8E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_29400 97ac724c0143f2705085ef042cd132f6 882 Pfam PF00196 Bacterial regulatory proteins, luxR family 825 876 1.6E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_29400 97ac724c0143f2705085ef042cd132f6 882 SUPERFAMILY SSF52540 5 217 1.13E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_29400 97ac724c0143f2705085ef042cd132f6 882 Pfam PF13191 AAA ATPase domain 6 154 2.1E-11 T 14-10-2018 AMIS_29400 97ac724c0143f2705085ef042cd132f6 882 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 856 868 1.2E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_29400 97ac724c0143f2705085ef042cd132f6 882 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 840 856 1.2E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_29400 97ac724c0143f2705085ef042cd132f6 882 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 826 840 1.2E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_29400 97ac724c0143f2705085ef042cd132f6 882 Gene3D G3DSA:1.10.10.10 779 881 1.1E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_5690 4f6b894a5446b0d7841ce75beb2127a2 485 Pfam PF00361 Proton-conducting membrane transporter 125 416 5.0E-47 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_5690 4f6b894a5446b0d7841ce75beb2127a2 485 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 6 481 14.382 T 14-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 AMIS_21950 f8b7cdfc53e2cf835503e0998ab9ddb2 115 SUPERFAMILY SSF46785 18 111 6.96E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_21950 f8b7cdfc53e2cf835503e0998ab9ddb2 115 Pfam PF03551 Transcriptional regulator PadR-like family 22 93 8.3E-20 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal AMIS_21950 f8b7cdfc53e2cf835503e0998ab9ddb2 115 Gene3D G3DSA:1.10.10.10 5 114 3.9E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_65930 d73055926d87e85667b2117123b261b0 1110 Gene3D G3DSA:2.160.20.10 730 1110 3.2E-20 T 14-10-2018 IPR012334 Pectin lyase fold AMIS_65930 d73055926d87e85667b2117123b261b0 1110 Gene3D G3DSA:2.60.40.10 323 432 3.2E-19 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_65930 d73055926d87e85667b2117123b261b0 1110 Pfam PF00754 F5/8 type C domain 31 154 5.6E-19 T 14-10-2018 IPR000421 Coagulation factor 5/8 C-terminal domain AMIS_65930 d73055926d87e85667b2117123b261b0 1110 Pfam PF00754 F5/8 type C domain 182 313 4.4E-7 T 14-10-2018 IPR000421 Coagulation factor 5/8 C-terminal domain AMIS_65930 d73055926d87e85667b2117123b261b0 1110 SUPERFAMILY SSF51126 732 1059 4.87E-24 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor AMIS_65930 d73055926d87e85667b2117123b261b0 1110 Pfam PF07705 CARDB 323 427 1.9E-22 T 14-10-2018 IPR011635 CARDB domain AMIS_65930 d73055926d87e85667b2117123b261b0 1110 Pfam PF07705 CARDB 441 545 2.7E-5 T 14-10-2018 IPR011635 CARDB domain AMIS_65930 d73055926d87e85667b2117123b261b0 1110 SMART SM00231 22 160 1.5E-7 T 14-10-2018 IPR000421 Coagulation factor 5/8 C-terminal domain AMIS_65930 d73055926d87e85667b2117123b261b0 1110 SUPERFAMILY SSF49785 23 160 3.83E-28 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_65930 d73055926d87e85667b2117123b261b0 1110 SUPERFAMILY SSF49785 169 319 3.05E-12 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_65930 d73055926d87e85667b2117123b261b0 1110 Gene3D G3DSA:2.60.40.10 433 555 3.1E-9 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_65930 d73055926d87e85667b2117123b261b0 1110 SMART SM00710 1006 1028 530.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMIS_65930 d73055926d87e85667b2117123b261b0 1110 SMART SM00710 856 878 100.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMIS_65930 d73055926d87e85667b2117123b261b0 1110 SMART SM00710 1039 1071 610.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMIS_65930 d73055926d87e85667b2117123b261b0 1110 SMART SM00710 880 902 1300.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMIS_65930 d73055926d87e85667b2117123b261b0 1110 SMART SM00710 935 958 2100.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMIS_65930 d73055926d87e85667b2117123b261b0 1110 Gene3D G3DSA:2.60.120.260 22 164 1.1E-32 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_65930 d73055926d87e85667b2117123b261b0 1110 Gene3D G3DSA:2.60.120.260 173 321 1.0E-15 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_30350 0dbcea72b82fb37836a29e177c3546ce 219 Gene3D G3DSA:1.10.10.10 125 219 2.3E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_30350 0dbcea72b82fb37836a29e177c3546ce 219 Pfam PF00072 Response regulator receiver domain 18 119 1.3E-10 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_30350 0dbcea72b82fb37836a29e177c3546ce 219 SMART SM00862 146 218 2.3E-25 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_30350 0dbcea72b82fb37836a29e177c3546ce 219 SMART SM00448 10 119 3.4E-8 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_30350 0dbcea72b82fb37836a29e177c3546ce 219 SUPERFAMILY SSF46894 127 218 3.4E-24 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_30350 0dbcea72b82fb37836a29e177c3546ce 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 218 5.1E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_30350 0dbcea72b82fb37836a29e177c3546ce 219 Gene3D G3DSA:3.40.50.2300 10 124 1.2E-13 T 14-10-2018 AMIS_30350 0dbcea72b82fb37836a29e177c3546ce 219 SUPERFAMILY SSF52172 11 178 2.99E-19 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_47450 05f8b105add165e6701403e76161ad23 511 Pfam PF03824 High-affinity nickel-transport protein 215 467 8.8E-8 T 14-10-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 AMIS_37780 8c6b6e1bc13d38ee7dfdd7247630de3f 339 Gene3D G3DSA:3.40.50.2300 162 291 2.7E-77 T 14-10-2018 AMIS_37780 8c6b6e1bc13d38ee7dfdd7247630de3f 339 SMART SM00354 5 72 1.3E-14 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_37780 8c6b6e1bc13d38ee7dfdd7247630de3f 339 Gene3D G3DSA:3.40.50.2300 58 307 2.7E-77 T 14-10-2018 AMIS_37780 8c6b6e1bc13d38ee7dfdd7247630de3f 339 Pfam PF13377 Periplasmic binding protein-like domain 170 331 7.4E-44 T 14-10-2018 AMIS_37780 8c6b6e1bc13d38ee7dfdd7247630de3f 339 Gene3D G3DSA:1.10.260.40 1 57 4.3E-17 T 14-10-2018 AMIS_37780 8c6b6e1bc13d38ee7dfdd7247630de3f 339 SUPERFAMILY SSF53822 62 332 5.03E-83 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_37780 8c6b6e1bc13d38ee7dfdd7247630de3f 339 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 51 2.7E-15 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_37780 8c6b6e1bc13d38ee7dfdd7247630de3f 339 SUPERFAMILY SSF47413 4 53 1.21E-13 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_3650 a0a92229f5a6ab8f08e6c69fbd240e90 245 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 2 239 28.943 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AMIS_3650 a0a92229f5a6ab8f08e6c69fbd240e90 245 Pfam PF00290 Tryptophan synthase alpha chain 3 221 6.2E-70 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AMIS_3650 a0a92229f5a6ab8f08e6c69fbd240e90 245 Gene3D G3DSA:3.20.20.70 1 245 2.0E-87 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_3650 a0a92229f5a6ab8f08e6c69fbd240e90 245 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 5 229 7.4E-66 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AMIS_3650 a0a92229f5a6ab8f08e6c69fbd240e90 245 SUPERFAMILY SSF51366 3 225 2.17E-65 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AMIS_3650 a0a92229f5a6ab8f08e6c69fbd240e90 245 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 31 44 - T 14-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AMIS_32980 cb63001cce010be900496b025787a1f8 381 Gene3D G3DSA:1.10.3290.10 15 279 1.5E-50 T 14-10-2018 IPR036597 Fido-like domain superfamily AMIS_32980 cb63001cce010be900496b025787a1f8 381 SUPERFAMILY SSF140931 83 278 2.49E-29 T 14-10-2018 IPR036597 Fido-like domain superfamily AMIS_32980 cb63001cce010be900496b025787a1f8 381 Pfam PF02661 Fic/DOC family 108 209 1.9E-15 T 14-10-2018 IPR003812 Fido domain AMIS_33110 baf7a12b5513929fa19ecc546f78b8b7 156 SUPERFAMILY SSF55961 1 154 9.99E-16 T 14-10-2018 AMIS_33110 baf7a12b5513929fa19ecc546f78b8b7 156 Gene3D G3DSA:3.30.530.20 2 155 2.1E-12 T 14-10-2018 IPR023393 START-like domain superfamily AMIS_33110 baf7a12b5513929fa19ecc546f78b8b7 156 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 1 153 1.4E-7 T 14-10-2018 IPR019587 Polyketide cyclase/dehydrase AMIS_46250 0796925f8c7e03f514b9a909275f2e1d 66 Gene3D G3DSA:3.30.390.30 1 65 9.3E-12 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AMIS_46250 0796925f8c7e03f514b9a909275f2e1d 66 SUPERFAMILY SSF55424 3 59 3.09E-12 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AMIS_46250 0796925f8c7e03f514b9a909275f2e1d 66 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 5 52 1.1E-6 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AMIS_80480 8dc1a8d07e3c75e3e6b975db97e430a8 246 Gene3D G3DSA:3.60.160.10 20 221 2.7E-27 T 14-10-2018 IPR036983 Mitochondrial biogenesis AIM24 superfamily AMIS_80480 8dc1a8d07e3c75e3e6b975db97e430a8 246 SUPERFAMILY SSF51219 24 219 1.46E-46 T 14-10-2018 IPR016031 Tryptophan RNA-binding attenuator protein-like domain superfamily AMIS_80480 8dc1a8d07e3c75e3e6b975db97e430a8 246 Pfam PF01987 Mitochondrial biogenesis AIM24 24 216 4.9E-33 T 14-10-2018 IPR002838 Mitochondrial biogenesis protein AIM24 AMIS_15100 69fa61c9c5ee1bbd8401e8645ba94a60 931 SUPERFAMILY SSF50677 291 490 1.47E-43 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AMIS_15100 69fa61c9c5ee1bbd8401e8645ba94a60 931 Pfam PF09334 tRNA synthetases class I (M) 64 167 1.0E-12 T 14-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMIS_15100 69fa61c9c5ee1bbd8401e8645ba94a60 931 Gene3D G3DSA:3.40.50.620 211 665 1.1E-194 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMIS_15100 69fa61c9c5ee1bbd8401e8645ba94a60 931 SUPERFAMILY SSF52374 22 751 4.06E-111 T 14-10-2018 AMIS_15100 69fa61c9c5ee1bbd8401e8645ba94a60 931 Gene3D G3DSA:3.90.740.10 292 489 1.1E-194 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AMIS_15100 69fa61c9c5ee1bbd8401e8645ba94a60 931 Gene3D G3DSA:3.10.20.590 873 931 6.0E-17 T 14-10-2018 AMIS_15100 69fa61c9c5ee1bbd8401e8645ba94a60 931 Gene3D G3DSA:1.10.730.10 716 865 1.1E-194 T 14-10-2018 AMIS_15100 69fa61c9c5ee1bbd8401e8645ba94a60 931 Gene3D G3DSA:3.10.330.110 666 715 1.1E-194 T 14-10-2018 AMIS_15100 69fa61c9c5ee1bbd8401e8645ba94a60 931 Gene3D G3DSA:3.40.50.620 55 172 5.1E-41 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMIS_15100 69fa61c9c5ee1bbd8401e8645ba94a60 931 Pfam PF08264 Anticodon-binding domain of tRNA 785 894 6.0E-16 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 AMIS_15100 69fa61c9c5ee1bbd8401e8645ba94a60 931 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 16 931 21.297 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AMIS_15100 69fa61c9c5ee1bbd8401e8645ba94a60 931 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 286 479 1.6E-52 T 14-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 AMIS_15100 69fa61c9c5ee1bbd8401e8645ba94a60 931 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 211 931 6.3E-216 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AMIS_15100 69fa61c9c5ee1bbd8401e8645ba94a60 931 PRINTS PR00985 Leucyl-tRNA synthetase signature 623 645 1.6E-55 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AMIS_15100 69fa61c9c5ee1bbd8401e8645ba94a60 931 PRINTS PR00985 Leucyl-tRNA synthetase signature 251 264 1.6E-55 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AMIS_15100 69fa61c9c5ee1bbd8401e8645ba94a60 931 PRINTS PR00985 Leucyl-tRNA synthetase signature 280 299 1.6E-55 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AMIS_15100 69fa61c9c5ee1bbd8401e8645ba94a60 931 PRINTS PR00985 Leucyl-tRNA synthetase signature 575 593 1.6E-55 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AMIS_15100 69fa61c9c5ee1bbd8401e8645ba94a60 931 PRINTS PR00985 Leucyl-tRNA synthetase signature 656 666 1.6E-55 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AMIS_15100 69fa61c9c5ee1bbd8401e8645ba94a60 931 PRINTS PR00985 Leucyl-tRNA synthetase signature 151 168 1.6E-55 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AMIS_15100 69fa61c9c5ee1bbd8401e8645ba94a60 931 PRINTS PR00985 Leucyl-tRNA synthetase signature 218 234 1.6E-55 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AMIS_15100 69fa61c9c5ee1bbd8401e8645ba94a60 931 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 67 77 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMIS_15100 69fa61c9c5ee1bbd8401e8645ba94a60 931 SUPERFAMILY SSF47323 750 931 5.98E-33 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMIS_21270 0f6e6362ab3c7c4e10a9ed072d3df584 186 SUPERFAMILY SSF82771 10 79 4.84E-5 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 AMIS_43830 d71f141c0857ffb4ad12c107239463ef 265 SUPERFAMILY SSF88946 28 114 9.58E-26 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_43830 d71f141c0857ffb4ad12c107239463ef 265 Pfam PF04545 Sigma-70, region 4 209 257 8.3E-18 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 AMIS_43830 d71f141c0857ffb4ad12c107239463ef 265 SUPERFAMILY SSF88659 181 260 5.23E-17 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_43830 d71f141c0857ffb4ad12c107239463ef 265 TIGRFAM TIGR02980 SigBFG: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 40 260 2.5E-83 T 14-10-2018 IPR014322 RNA polymerase sigma-B/F/G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_43830 d71f141c0857ffb4ad12c107239463ef 265 Gene3D G3DSA:1.10.10.10 191 262 1.1E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_43830 d71f141c0857ffb4ad12c107239463ef 265 Pfam PF04539 Sigma-70 region 3 126 192 2.0E-12 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 AMIS_43830 d71f141c0857ffb4ad12c107239463ef 265 Pfam PF04542 Sigma-70 region 2 46 114 2.1E-15 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_43830 d71f141c0857ffb4ad12c107239463ef 265 SUPERFAMILY SSF88659 118 184 5.67E-13 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_43830 d71f141c0857ffb4ad12c107239463ef 265 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 42 260 9.9E-34 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_43830 d71f141c0857ffb4ad12c107239463ef 265 Gene3D G3DSA:1.10.10.10 117 168 3.4E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_43830 d71f141c0857ffb4ad12c107239463ef 265 PRINTS PR00046 Major sigma-70 factor signature 69 82 9.9E-10 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMIS_43830 d71f141c0857ffb4ad12c107239463ef 265 PRINTS PR00046 Major sigma-70 factor signature 213 225 9.9E-10 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMIS_43830 d71f141c0857ffb4ad12c107239463ef 265 PRINTS PR00046 Major sigma-70 factor signature 245 256 9.9E-10 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMIS_43830 d71f141c0857ffb4ad12c107239463ef 265 PRINTS PR00046 Major sigma-70 factor signature 230 245 9.9E-10 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMIS_43830 d71f141c0857ffb4ad12c107239463ef 265 Gene3D G3DSA:1.10.601.10 9 116 6.8E-15 T 14-10-2018 AMIS_42270 40db0378496522ea3da196c766509c90 402 PRINTS PR00409 Phthalate dioxygenase reductase family signature 206 220 5.5E-5 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AMIS_42270 40db0378496522ea3da196c766509c90 402 PRINTS PR00409 Phthalate dioxygenase reductase family signature 269 288 5.5E-5 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AMIS_42270 40db0378496522ea3da196c766509c90 402 SUPERFAMILY SSF63380 155 261 6.81E-24 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AMIS_42270 40db0378496522ea3da196c766509c90 402 SUPERFAMILY SSF52343 262 394 1.96E-28 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMIS_42270 40db0378496522ea3da196c766509c90 402 Pfam PF00970 Oxidoreductase FAD-binding domain 159 259 5.8E-7 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 AMIS_42270 40db0378496522ea3da196c766509c90 402 Gene3D G3DSA:3.40.50.80 263 397 7.4E-25 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMIS_42270 40db0378496522ea3da196c766509c90 402 SUPERFAMILY SSF46458 1 148 4.99E-34 T 14-10-2018 IPR009050 Globin-like superfamily AMIS_42270 40db0378496522ea3da196c766509c90 402 Pfam PF00042 Globin 9 105 8.4E-6 T 14-10-2018 IPR000971 Globin GO:0020037 AMIS_42270 40db0378496522ea3da196c766509c90 402 Gene3D G3DSA:1.10.490.10 1 147 4.6E-50 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 AMIS_42270 40db0378496522ea3da196c766509c90 402 Gene3D G3DSA:2.40.30.10 153 260 1.1E-24 T 14-10-2018 AMIS_42270 40db0378496522ea3da196c766509c90 402 Pfam PF00175 Oxidoreductase NAD-binding domain 272 374 8.7E-6 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AMIS_23240 e760b80cdb05f7ffddb4e6141606f6c3 412 Gene3D G3DSA:1.20.1250.20 1 185 9.9E-15 T 14-10-2018 AMIS_23240 e760b80cdb05f7ffddb4e6141606f6c3 412 Gene3D G3DSA:1.20.1250.20 217 404 1.2E-16 T 14-10-2018 AMIS_23240 e760b80cdb05f7ffddb4e6141606f6c3 412 SUPERFAMILY SSF103473 3 396 6.8E-39 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_23240 e760b80cdb05f7ffddb4e6141606f6c3 412 Pfam PF07690 Major Facilitator Superfamily 5 363 8.3E-20 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_55140 9eca44ffe0b49d9642fec017798554be 341 SUPERFAMILY SSF53822 63 324 9.23E-61 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_55140 9eca44ffe0b49d9642fec017798554be 341 SUPERFAMILY SSF47413 3 60 8.91E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_55140 9eca44ffe0b49d9642fec017798554be 341 Gene3D G3DSA:1.10.260.40 1 60 2.0E-21 T 14-10-2018 AMIS_55140 9eca44ffe0b49d9642fec017798554be 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 3.8E-13 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_55140 9eca44ffe0b49d9642fec017798554be 341 Pfam PF13377 Periplasmic binding protein-like domain 165 320 9.9E-34 T 14-10-2018 AMIS_55140 9eca44ffe0b49d9642fec017798554be 341 Gene3D G3DSA:3.40.50.2300 156 283 2.0E-69 T 14-10-2018 AMIS_55140 9eca44ffe0b49d9642fec017798554be 341 Gene3D G3DSA:3.40.50.2300 63 299 2.0E-69 T 14-10-2018 AMIS_55140 9eca44ffe0b49d9642fec017798554be 341 SMART SM00354 2 72 1.2E-25 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_29520 d213a7ef807a84c0803e618485e9701d 548 SMART SM00304 233 285 1.7E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_29520 d213a7ef807a84c0803e618485e9701d 548 SUPERFAMILY SSF58104 253 546 4.84E-62 T 14-10-2018 AMIS_29520 d213a7ef807a84c0803e618485e9701d 548 Pfam PF00672 HAMP domain 233 282 4.6E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_29520 d213a7ef807a84c0803e618485e9701d 548 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 354 520 8.9E-33 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_29520 d213a7ef807a84c0803e618485e9701d 548 SMART SM00283 293 547 6.9E-43 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_29520 d213a7ef807a84c0803e618485e9701d 548 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 420 449 6.9E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_29520 d213a7ef807a84c0803e618485e9701d 548 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 468 497 6.9E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_29520 d213a7ef807a84c0803e618485e9701d 548 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 391 418 6.9E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_29520 d213a7ef807a84c0803e618485e9701d 548 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 210 230 6.9E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_29520 d213a7ef807a84c0803e618485e9701d 548 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 310 339 6.9E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_29520 d213a7ef807a84c0803e618485e9701d 548 Gene3D G3DSA:1.10.287.950 232 548 1.2E-62 T 14-10-2018 AMIS_74510 1818a42037dc45ad61b94f3ecfc12247 221 SUPERFAMILY SSF52972 23 210 2.35E-56 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AMIS_74510 1818a42037dc45ad61b94f3ecfc12247 221 PIRSF PIRSF006305 19 217 2.2E-44 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 AMIS_74510 1818a42037dc45ad61b94f3ecfc12247 221 Pfam PF02545 Maf-like protein 25 210 7.3E-48 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 AMIS_74510 1818a42037dc45ad61b94f3ecfc12247 221 Hamap MF_00528 Septum formation protein Maf [maf]. 25 215 28.864 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 AMIS_74510 1818a42037dc45ad61b94f3ecfc12247 221 TIGRFAM TIGR00172 maf: septum formation protein Maf 23 208 8.6E-52 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 AMIS_74510 1818a42037dc45ad61b94f3ecfc12247 221 Gene3D G3DSA:3.90.950.10 24 216 1.1E-61 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AMIS_70660 b1873ba2cef463a2cc5cd490122f6293 246 SMART SM00535 24 161 2.9E-53 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 AMIS_70660 b1873ba2cef463a2cc5cd490122f6293 246 Hamap MF_00104 Ribonuclease 3 [rnc]. 13 229 29.177 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 AMIS_70660 b1873ba2cef463a2cc5cd490122f6293 246 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 14 231 4.8E-69 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 AMIS_70660 b1873ba2cef463a2cc5cd490122f6293 246 Gene3D G3DSA:3.30.160.20 166 235 3.8E-22 T 14-10-2018 AMIS_70660 b1873ba2cef463a2cc5cd490122f6293 246 Pfam PF00035 Double-stranded RNA binding motif 167 232 1.7E-14 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain AMIS_70660 b1873ba2cef463a2cc5cd490122f6293 246 Pfam PF14622 Ribonuclease-III-like 23 151 1.1E-36 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 AMIS_70660 b1873ba2cef463a2cc5cd490122f6293 246 SUPERFAMILY SSF69065 5 169 5.76E-46 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 AMIS_70660 b1873ba2cef463a2cc5cd490122f6293 246 SUPERFAMILY SSF54768 121 232 4.56E-26 T 14-10-2018 AMIS_70660 b1873ba2cef463a2cc5cd490122f6293 246 ProSitePatterns PS00517 Ribonuclease III family signature. 46 54 - T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 AMIS_70660 b1873ba2cef463a2cc5cd490122f6293 246 SMART SM00358 167 233 1.0E-19 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain AMIS_70660 b1873ba2cef463a2cc5cd490122f6293 246 Gene3D G3DSA:1.10.1520.10 7 158 4.3E-48 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 AMIS_49610 864a8668bfe9903b5ee00452302946fd 341 Gene3D G3DSA:3.20.10.10 151 323 6.3E-116 T 14-10-2018 AMIS_49610 864a8668bfe9903b5ee00452302946fd 341 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 27 336 1.2E-102 T 14-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 AMIS_49610 864a8668bfe9903b5ee00452302946fd 341 SUPERFAMILY SSF56752 2 336 1.7E-95 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 AMIS_49610 864a8668bfe9903b5ee00452302946fd 341 Pfam PF01063 Amino-transferase class IV 49 296 5.0E-32 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 AMIS_49610 864a8668bfe9903b5ee00452302946fd 341 PIRSF PIRSF006468 1 341 1.1E-106 T 14-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 AMIS_49610 864a8668bfe9903b5ee00452302946fd 341 Gene3D G3DSA:3.30.470.10 3 336 6.3E-116 T 14-10-2018 AMIS_49610 864a8668bfe9903b5ee00452302946fd 341 ProSitePatterns PS00770 Aminotransferases class-IV signature. 213 246 - T 14-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 AMIS_69440 18da2b238d9f6d4210a65847ce7f08aa 264 SUPERFAMILY SSF55073 51 179 9.73E-5 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_76780 5e41f36faddab7d85ecf40f43a8dc8b6 133 PRINTS PR00502 NUDIX hydrolase family signature 29 43 7.1E-9 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AMIS_76780 5e41f36faddab7d85ecf40f43a8dc8b6 133 PRINTS PR00502 NUDIX hydrolase family signature 43 58 7.1E-9 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AMIS_76780 5e41f36faddab7d85ecf40f43a8dc8b6 133 SUPERFAMILY SSF55811 2 125 7.31E-25 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMIS_76780 5e41f36faddab7d85ecf40f43a8dc8b6 133 Gene3D G3DSA:3.90.79.10 1 130 1.9E-24 T 14-10-2018 AMIS_76780 5e41f36faddab7d85ecf40f43a8dc8b6 133 ProSitePatterns PS00893 Nudix box signature. 34 55 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMIS_76780 5e41f36faddab7d85ecf40f43a8dc8b6 133 Pfam PF00293 NUDIX domain 3 123 2.1E-17 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMIS_63290 dd8229d0b662857cd651abf7fb123a5d 249 SMART SM00382 30 217 8.3E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_63290 dd8229d0b662857cd651abf7fb123a5d 249 SUPERFAMILY SSF52540 17 236 2.56E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_63290 dd8229d0b662857cd651abf7fb123a5d 249 Gene3D G3DSA:3.40.50.300 4 239 2.0E-55 T 14-10-2018 AMIS_63290 dd8229d0b662857cd651abf7fb123a5d 249 Pfam PF00005 ABC transporter 22 166 4.0E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_3830 456c9619cdf19ca4e1ace4c585fa176f 148 Pfam PF01047 MarR family 39 97 1.1E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_3830 456c9619cdf19ca4e1ace4c585fa176f 148 SMART SM00347 32 132 8.0E-25 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_3830 456c9619cdf19ca4e1ace4c585fa176f 148 ProSitePatterns PS01117 MarR-type HTH domain signature. 71 105 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site AMIS_3830 456c9619cdf19ca4e1ace4c585fa176f 148 SUPERFAMILY SSF46785 14 144 4.89E-30 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_3830 456c9619cdf19ca4e1ace4c585fa176f 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 122 142 1.2E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_3830 456c9619cdf19ca4e1ace4c585fa176f 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 73 88 1.2E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_3830 456c9619cdf19ca4e1ace4c585fa176f 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 92 108 1.2E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_3830 456c9619cdf19ca4e1ace4c585fa176f 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 56 72 1.2E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_3830 456c9619cdf19ca4e1ace4c585fa176f 148 Gene3D G3DSA:1.10.10.10 14 147 3.3E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_62220 7656dbe3d30869122c74380950cc2c80 139 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 20 138 4.0E-35 T 14-10-2018 AMIS_62220 7656dbe3d30869122c74380950cc2c80 139 Gene3D G3DSA:3.40.50.9100 1 139 2.1E-57 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AMIS_62220 7656dbe3d30869122c74380950cc2c80 139 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 139 59.407 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AMIS_62220 7656dbe3d30869122c74380950cc2c80 139 SUPERFAMILY SSF52304 2 138 1.27E-53 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AMIS_62220 7656dbe3d30869122c74380950cc2c80 139 ProSitePatterns PS01029 Dehydroquinase class II signature. 5 22 - T 14-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AMIS_62220 7656dbe3d30869122c74380950cc2c80 139 Pfam PF01220 Dehydroquinase class II 2 137 1.4E-52 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AMIS_62220 7656dbe3d30869122c74380950cc2c80 139 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 2 138 1.5E-53 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AMIS_62220 7656dbe3d30869122c74380950cc2c80 139 PIRSF PIRSF001399 1 139 1.3E-55 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AMIS_64070 0503a7a53b2f74bf5c431a2c12f54272 597 Gene3D G3DSA:1.10.246.130 286 406 1.8E-23 T 14-10-2018 AMIS_64070 0503a7a53b2f74bf5c431a2c12f54272 597 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 43 582 1.9E-116 T 14-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 AMIS_64070 0503a7a53b2f74bf5c431a2c12f54272 597 Gene3D G3DSA:3.60.20.40 408 591 1.5E-51 T 14-10-2018 AMIS_64070 0503a7a53b2f74bf5c431a2c12f54272 597 Pfam PF01019 Gamma-glutamyltranspeptidase 56 585 2.5E-140 T 14-10-2018 AMIS_64070 0503a7a53b2f74bf5c431a2c12f54272 597 SUPERFAMILY SSF56235 34 590 9.37E-140 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMIS_64070 0503a7a53b2f74bf5c431a2c12f54272 597 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 300 319 4.7E-66 T 14-10-2018 AMIS_64070 0503a7a53b2f74bf5c431a2c12f54272 597 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 270 286 4.7E-66 T 14-10-2018 AMIS_64070 0503a7a53b2f74bf5c431a2c12f54272 597 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 432 450 4.7E-66 T 14-10-2018 AMIS_64070 0503a7a53b2f74bf5c431a2c12f54272 597 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 468 483 4.7E-66 T 14-10-2018 AMIS_64070 0503a7a53b2f74bf5c431a2c12f54272 597 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 408 426 4.7E-66 T 14-10-2018 AMIS_64070 0503a7a53b2f74bf5c431a2c12f54272 597 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 492 509 4.7E-66 T 14-10-2018 AMIS_64070 0503a7a53b2f74bf5c431a2c12f54272 597 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 157 176 4.7E-66 T 14-10-2018 AMIS_64070 0503a7a53b2f74bf5c431a2c12f54272 597 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 63 88 4.7E-66 T 14-10-2018 AMIS_64070 0503a7a53b2f74bf5c431a2c12f54272 597 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 139 157 4.7E-66 T 14-10-2018 AMIS_58390 05c8e1f51deb6def1dc94d5a9c952ef8 245 Pfam PF08241 Methyltransferase domain 46 132 2.7E-7 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 AMIS_58390 05c8e1f51deb6def1dc94d5a9c952ef8 245 SUPERFAMILY SSF53335 29 244 3.2E-20 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_58390 05c8e1f51deb6def1dc94d5a9c952ef8 245 Gene3D G3DSA:3.40.50.150 19 244 2.4E-13 T 14-10-2018 AMIS_66150 6e1cf08a1afed89bff6146f77f2419f8 687 Pfam PF00005 ABC transporter 430 608 2.0E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_66150 6e1cf08a1afed89bff6146f77f2419f8 687 SUPERFAMILY SSF52540 406 676 2.77E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_66150 6e1cf08a1afed89bff6146f77f2419f8 687 SUPERFAMILY SSF90123 36 398 3.92E-87 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMIS_66150 6e1cf08a1afed89bff6146f77f2419f8 687 SMART SM00382 438 654 7.4E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_66150 6e1cf08a1afed89bff6146f77f2419f8 687 ProSitePatterns PS00211 ABC transporters family signature. 580 594 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_66150 6e1cf08a1afed89bff6146f77f2419f8 687 Pfam PF00664 ABC transporter transmembrane region 59 365 1.0E-57 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AMIS_54330 c146ecd8d18af5ff66aa266f6ad68f1b 427 Gene3D G3DSA:1.10.580.10 55 410 1.6E-140 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AMIS_54330 c146ecd8d18af5ff66aa266f6ad68f1b 427 Pfam PF00285 Citrate synthase, C-terminal domain 44 410 1.6E-134 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 AMIS_54330 c146ecd8d18af5ff66aa266f6ad68f1b 427 PIRSF PIRSF001369 35 427 4.0E-155 T 14-10-2018 IPR024176 Citrate synthase, bacterial-type AMIS_54330 c146ecd8d18af5ff66aa266f6ad68f1b 427 Gene3D G3DSA:1.10.230.10 266 375 1.6E-140 T 14-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain AMIS_54330 c146ecd8d18af5ff66aa266f6ad68f1b 427 Gene3D G3DSA:2.20.28.60 2 48 1.4E-12 T 14-10-2018 AMIS_54330 c146ecd8d18af5ff66aa266f6ad68f1b 427 SUPERFAMILY SSF48256 10 427 1.83E-154 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 AMIS_54330 c146ecd8d18af5ff66aa266f6ad68f1b 427 PRINTS PR00143 Citrate synthase signature 239 267 5.2E-54 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 AMIS_54330 c146ecd8d18af5ff66aa266f6ad68f1b 427 PRINTS PR00143 Citrate synthase signature 295 315 5.2E-54 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 AMIS_54330 c146ecd8d18af5ff66aa266f6ad68f1b 427 PRINTS PR00143 Citrate synthase signature 358 374 5.2E-54 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 AMIS_54330 c146ecd8d18af5ff66aa266f6ad68f1b 427 PRINTS PR00143 Citrate synthase signature 378 392 5.2E-54 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 AMIS_54330 c146ecd8d18af5ff66aa266f6ad68f1b 427 PRINTS PR00143 Citrate synthase signature 217 232 5.2E-54 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 AMIS_54330 c146ecd8d18af5ff66aa266f6ad68f1b 427 PRINTS PR00143 Citrate synthase signature 163 176 5.2E-54 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 AMIS_54330 c146ecd8d18af5ff66aa266f6ad68f1b 427 ProSitePatterns PS00480 Citrate synthase signature. 302 314 - T 14-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AMIS_54330 c146ecd8d18af5ff66aa266f6ad68f1b 427 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 13 421 4.6E-175 T 14-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 AMIS_73170 3fae6aba76f297dd3c5621df761c4be0 424 Pfam PF07394 Protein of unknown function (DUF1501) 57 376 1.6E-27 T 14-10-2018 IPR010869 Protein of unknown function DUF1501 AMIS_1150 0bbb7613a88b6127d67c17a197464070 473 Gene3D G3DSA:1.10.40.30 363 439 2.2E-141 T 14-10-2018 AMIS_1150 0bbb7613a88b6127d67c17a197464070 473 SUPERFAMILY SSF48557 6 452 1.57E-82 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 AMIS_1150 0bbb7613a88b6127d67c17a197464070 473 Pfam PF00206 Lyase 37 301 2.9E-21 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal AMIS_1150 0bbb7613a88b6127d67c17a197464070 473 SMART SM00998 365 451 3.4E-20 T 14-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AMIS_1150 0bbb7613a88b6127d67c17a197464070 473 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 7 450 1.6E-125 T 14-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AMIS_1150 0bbb7613a88b6127d67c17a197464070 473 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AMIS_1150 0bbb7613a88b6127d67c17a197464070 473 Pfam PF10397 Adenylosuccinate lyase C-terminus 366 450 1.4E-12 T 14-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AMIS_1150 0bbb7613a88b6127d67c17a197464070 473 Gene3D G3DSA:1.20.200.10 10 448 2.2E-141 T 14-10-2018 AMIS_1150 0bbb7613a88b6127d67c17a197464070 473 Gene3D G3DSA:1.10.275.60 21 230 2.2E-141 T 14-10-2018 AMIS_1150 0bbb7613a88b6127d67c17a197464070 473 PRINTS PR00149 Fumarate lyase superfamily signature 94 112 1.9E-11 T 14-10-2018 IPR000362 Fumarate lyase family AMIS_1150 0bbb7613a88b6127d67c17a197464070 473 PRINTS PR00149 Fumarate lyase superfamily signature 233 260 1.9E-11 T 14-10-2018 IPR000362 Fumarate lyase family AMIS_1150 0bbb7613a88b6127d67c17a197464070 473 PRINTS PR00149 Fumarate lyase superfamily signature 139 157 1.9E-11 T 14-10-2018 IPR000362 Fumarate lyase family AMIS_1150 0bbb7613a88b6127d67c17a197464070 473 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 1.9E-11 T 14-10-2018 IPR000362 Fumarate lyase family AMIS_72550 ba764d9ea3f7af6f7c9fa40ab600ca5c 452 Pfam PF00722 Glycosyl hydrolases family 16 85 297 1.2E-9 T 14-10-2018 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 AMIS_72550 ba764d9ea3f7af6f7c9fa40ab600ca5c 452 SUPERFAMILY SSF49785 317 451 6.46E-34 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_72550 ba764d9ea3f7af6f7c9fa40ab600ca5c 452 Gene3D G3DSA:2.60.120.200 27 304 2.1E-82 T 14-10-2018 AMIS_72550 ba764d9ea3f7af6f7c9fa40ab600ca5c 452 SUPERFAMILY SSF49899 27 303 1.06E-48 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily AMIS_72550 ba764d9ea3f7af6f7c9fa40ab600ca5c 452 SMART SM00606 318 452 3.8E-51 T 14-10-2018 IPR006584 Cellulose binding, type IV GO:0030246 AMIS_72550 ba764d9ea3f7af6f7c9fa40ab600ca5c 452 Pfam PF03422 Carbohydrate binding module (family 6) 326 451 1.6E-37 T 14-10-2018 IPR005084 Carbohydrate binding module family 6 GO:0030246 AMIS_72550 ba764d9ea3f7af6f7c9fa40ab600ca5c 452 Gene3D G3DSA:2.60.120.260 305 452 4.6E-44 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_34790 2723d9c06a99ed55d213843455e3435c 223 SMART SM00421 154 211 8.9E-25 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_34790 2723d9c06a99ed55d213843455e3435c 223 SMART SM00448 4 117 3.6E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_34790 2723d9c06a99ed55d213843455e3435c 223 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 171 1.5E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_34790 2723d9c06a99ed55d213843455e3435c 223 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 187 1.5E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_34790 2723d9c06a99ed55d213843455e3435c 223 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 187 199 1.5E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_34790 2723d9c06a99ed55d213843455e3435c 223 Pfam PF00072 Response regulator receiver domain 6 116 1.3E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_34790 2723d9c06a99ed55d213843455e3435c 223 Pfam PF00196 Bacterial regulatory proteins, luxR family 157 210 2.1E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_34790 2723d9c06a99ed55d213843455e3435c 223 Gene3D G3DSA:3.40.50.12740 4 217 4.1E-71 T 14-10-2018 AMIS_34790 2723d9c06a99ed55d213843455e3435c 223 SUPERFAMILY SSF46894 152 218 6.46E-22 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_34790 2723d9c06a99ed55d213843455e3435c 223 ProSitePatterns PS00622 LuxR-type HTH domain signature. 171 198 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_34790 2723d9c06a99ed55d213843455e3435c 223 SUPERFAMILY SSF52172 4 134 5.98E-35 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_43750 853c3d60b102c8ed31c502d224934133 76 SMART SM00530 9 65 2.5E-16 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMIS_43750 853c3d60b102c8ed31c502d224934133 76 Pfam PF01381 Helix-turn-helix 10 64 2.4E-17 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMIS_43750 853c3d60b102c8ed31c502d224934133 76 SUPERFAMILY SSF47413 4 71 1.3E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_43750 853c3d60b102c8ed31c502d224934133 76 Gene3D G3DSA:1.10.260.40 6 70 1.7E-28 T 14-10-2018 AMIS_75320 b1b6fe3028db1b2cb29ebd8670583750 663 SUPERFAMILY SSF158472 238 289 7.06E-13 T 14-10-2018 AMIS_75320 b1b6fe3028db1b2cb29ebd8670583750 663 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 469 639 8.9E-50 T 14-10-2018 IPR000160 GGDEF domain AMIS_75320 b1b6fe3028db1b2cb29ebd8670583750 663 Gene3D G3DSA:3.30.450.40 293 468 9.6E-24 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_75320 b1b6fe3028db1b2cb29ebd8670583750 663 Gene3D G3DSA:1.20.1480.50 207 292 7.0E-17 T 14-10-2018 AMIS_75320 b1b6fe3028db1b2cb29ebd8670583750 663 SMART SM00267 461 639 2.8E-49 T 14-10-2018 IPR000160 GGDEF domain AMIS_75320 b1b6fe3028db1b2cb29ebd8670583750 663 SMART SM00065 315 469 4.3E-9 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_75320 b1b6fe3028db1b2cb29ebd8670583750 663 SUPERFAMILY SSF55781 306 472 7.85E-21 T 14-10-2018 AMIS_75320 b1b6fe3028db1b2cb29ebd8670583750 663 Pfam PF00672 HAMP domain 238 286 2.8E-16 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_75320 b1b6fe3028db1b2cb29ebd8670583750 663 SMART SM00304 238 290 1.1E-18 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_75320 b1b6fe3028db1b2cb29ebd8670583750 663 Pfam PF00990 Diguanylate cyclase, GGDEF domain 473 634 5.5E-42 T 14-10-2018 IPR000160 GGDEF domain AMIS_75320 b1b6fe3028db1b2cb29ebd8670583750 663 Pfam PF01590 GAF domain 315 459 4.4E-10 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_75320 b1b6fe3028db1b2cb29ebd8670583750 663 SUPERFAMILY SSF55073 477 639 6.04E-47 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_75320 b1b6fe3028db1b2cb29ebd8670583750 663 Gene3D G3DSA:3.30.70.270 469 643 3.0E-56 T 14-10-2018 AMIS_11170 8305c372d279210bdd0b5abe667955ce 229 SMART SM00342 139 221 7.4E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMIS_11170 8305c372d279210bdd0b5abe667955ce 229 Gene3D G3DSA:1.10.10.60 126 226 5.2E-22 T 14-10-2018 AMIS_11170 8305c372d279210bdd0b5abe667955ce 229 SUPERFAMILY SSF46689 176 224 4.93E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_11170 8305c372d279210bdd0b5abe667955ce 229 SUPERFAMILY SSF46689 124 173 6.9E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_11170 8305c372d279210bdd0b5abe667955ce 229 Pfam PF12833 Helix-turn-helix domain 145 222 1.5E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMIS_70410 c8da08fc56359cfbd546eac1bab33ecb 325 Gene3D G3DSA:3.90.550.10 1 225 1.2E-34 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_70410 c8da08fc56359cfbd546eac1bab33ecb 325 Pfam PF00535 Glycosyl transferase family 2 7 142 1.5E-28 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AMIS_70410 c8da08fc56359cfbd546eac1bab33ecb 325 SUPERFAMILY SSF53448 1 178 7.67E-32 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_10370 2f524bc1d58cb29942764e06d3d7eae5 476 Gene3D G3DSA:2.80.10.50 27 80 2.4E-9 T 14-10-2018 AMIS_10370 2f524bc1d58cb29942764e06d3d7eae5 476 SUPERFAMILY SSF51126 187 474 1.05E-70 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor AMIS_10370 2f524bc1d58cb29942764e06d3d7eae5 476 SMART SM00458 40 179 5.7E-13 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_10370 2f524bc1d58cb29942764e06d3d7eae5 476 Pfam PF01095 Pectinesterase 190 468 7.6E-52 T 14-10-2018 IPR000070 Pectinesterase, catalytic GO:0005618|GO:0030599|GO:0042545 KEGG: 00040+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248 AMIS_10370 2f524bc1d58cb29942764e06d3d7eae5 476 Gene3D G3DSA:2.80.10.50 81 134 8.4E-14 T 14-10-2018 AMIS_10370 2f524bc1d58cb29942764e06d3d7eae5 476 Gene3D G3DSA:2.80.10.50 135 187 1.6E-11 T 14-10-2018 AMIS_10370 2f524bc1d58cb29942764e06d3d7eae5 476 ProSitePatterns PS00503 Pectinesterase signature 2. 333 342 - T 14-10-2018 IPR033131 Pectinesterase, Asp active site KEGG: 00040+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248 AMIS_10370 2f524bc1d58cb29942764e06d3d7eae5 476 SUPERFAMILY SSF50370 40 180 7.02E-40 T 14-10-2018 IPR035992 Ricin B-like lectins AMIS_10370 2f524bc1d58cb29942764e06d3d7eae5 476 Pfam PF14200 Ricin-type beta-trefoil lectin domain-like 80 165 1.2E-21 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_10370 2f524bc1d58cb29942764e06d3d7eae5 476 Gene3D G3DSA:2.160.20.10 188 475 1.6E-92 T 14-10-2018 IPR012334 Pectin lyase fold AMIS_26820 8421f413ec1be56495aad6e362825966 579 SUPERFAMILY SSF52540 337 573 8.3E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_26820 8421f413ec1be56495aad6e362825966 579 SUPERFAMILY SSF90123 15 316 1.31E-55 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMIS_26820 8421f413ec1be56495aad6e362825966 579 Pfam PF00005 ABC transporter 367 505 1.7E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_26820 8421f413ec1be56495aad6e362825966 579 SMART SM00382 367 551 1.7E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_26820 8421f413ec1be56495aad6e362825966 579 Pfam PF00664 ABC transporter transmembrane region 27 293 2.4E-32 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AMIS_26820 8421f413ec1be56495aad6e362825966 579 ProSitePatterns PS00211 ABC transporters family signature. 477 491 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_26820 8421f413ec1be56495aad6e362825966 579 Gene3D G3DSA:1.20.1560.10 12 318 1.5E-59 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMIS_26820 8421f413ec1be56495aad6e362825966 579 Gene3D G3DSA:3.40.50.300 331 575 4.9E-75 T 14-10-2018 AMIS_31640 c516325fcf76dd16c55e043720f2f7f3 328 Gene3D G3DSA:3.90.1580.10 33 313 4.2E-112 T 14-10-2018 AMIS_31640 c516325fcf76dd16c55e043720f2f7f3 328 SUPERFAMILY SSF56436 36 307 5.92E-90 T 14-10-2018 IPR016187 C-type lectin fold AMIS_31640 c516325fcf76dd16c55e043720f2f7f3 328 Pfam PF03781 Sulfatase-modifying factor enzyme 1 35 306 1.7E-82 T 14-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 AMIS_24910 367ed05e26e4338edcec57205799df18 939 SMART SM00560 215 350 3.5E-9 T 14-10-2018 IPR006558 LamG-like jellyroll fold AMIS_24910 367ed05e26e4338edcec57205799df18 939 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 199 353 5.8E-33 T 14-10-2018 AMIS_24910 367ed05e26e4338edcec57205799df18 939 SUPERFAMILY SSF49899 174 353 4.94E-37 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily AMIS_24910 367ed05e26e4338edcec57205799df18 939 Gene3D G3DSA:2.60.120.200 198 389 5.9E-36 T 14-10-2018 AMIS_24910 367ed05e26e4338edcec57205799df18 939 Pfam PF07944 Beta-L-arabinofuranosidase, GH127 73 168 2.4E-12 T 14-10-2018 IPR012878 Beta-L-arabinofuranosidase, GH127 AMIS_24910 367ed05e26e4338edcec57205799df18 939 Pfam PF07944 Beta-L-arabinofuranosidase, GH127 397 807 5.6E-93 T 14-10-2018 IPR012878 Beta-L-arabinofuranosidase, GH127 AMIS_24910 367ed05e26e4338edcec57205799df18 939 SUPERFAMILY SSF48208 422 655 8.5E-10 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AMIS_4500 bc1eafc8e32e973a3adb7ffd82bfa5d7 195 Pfam PF01169 Uncharacterized protein family UPF0016 113 183 1.1E-21 T 14-10-2018 IPR001727 Gdt1 family AMIS_4500 bc1eafc8e32e973a3adb7ffd82bfa5d7 195 Pfam PF01169 Uncharacterized protein family UPF0016 11 83 4.6E-22 T 14-10-2018 IPR001727 Gdt1 family AMIS_12110 89bfcc718b1d7c5d8fcc4f440ab28e5c 171 Gene3D G3DSA:3.40.50.720 20 164 1.0E-24 T 14-10-2018 AMIS_12110 89bfcc718b1d7c5d8fcc4f440ab28e5c 171 Pfam PF13478 XdhC Rossmann domain 22 157 1.9E-22 T 14-10-2018 IPR027051 XdhC Rossmann domain AMIS_75240 1206b67261516d9bca1cee9b3807fe4d 414 SUPERFAMILY SSF55874 237 402 1.61E-20 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_75240 1206b67261516d9bca1cee9b3807fe4d 414 Gene3D G3DSA:3.30.450.40 11 168 4.9E-18 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_75240 1206b67261516d9bca1cee9b3807fe4d 414 SMART SM00387 292 401 1.4E-4 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_75240 1206b67261516d9bca1cee9b3807fe4d 414 Pfam PF01590 GAF domain 30 156 6.3E-10 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_75240 1206b67261516d9bca1cee9b3807fe4d 414 Gene3D G3DSA:1.10.287.130 190 243 1.5E-20 T 14-10-2018 AMIS_75240 1206b67261516d9bca1cee9b3807fe4d 414 Gene3D G3DSA:3.30.565.10 248 398 1.5E-20 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_75240 1206b67261516d9bca1cee9b3807fe4d 414 SUPERFAMILY SSF55781 28 162 3.71E-26 T 14-10-2018 AMIS_75240 1206b67261516d9bca1cee9b3807fe4d 414 SMART SM00065 25 167 5.3E-7 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_1810 3f746837e730646b61cf90c95bda3b12 1467 Gene3D G3DSA:3.30.450.40 815 975 2.8E-20 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_1810 3f746837e730646b61cf90c95bda3b12 1467 SUPERFAMILY SSF47384 1028 1110 1.18E-20 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_1810 3f746837e730646b61cf90c95bda3b12 1467 Gene3D G3DSA:3.40.50.12740 1337 1466 8.6E-38 T 14-10-2018 AMIS_1810 3f746837e730646b61cf90c95bda3b12 1467 SMART SM00388 1041 1109 2.6E-21 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_1810 3f746837e730646b61cf90c95bda3b12 1467 Pfam PF00072 Response regulator receiver domain 1340 1451 2.0E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_1810 3f746837e730646b61cf90c95bda3b12 1467 Gene3D G3DSA:3.30.565.10 1110 1281 2.7E-48 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_1810 3f746837e730646b61cf90c95bda3b12 1467 SMART SM00304 12 62 61.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_1810 3f746837e730646b61cf90c95bda3b12 1467 SMART SM00304 476 528 1.4E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_1810 3f746837e730646b61cf90c95bda3b12 1467 SMART SM00304 660 712 1.7E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_1810 3f746837e730646b61cf90c95bda3b12 1467 SMART SM00304 292 344 4.5E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_1810 3f746837e730646b61cf90c95bda3b12 1467 SMART SM00304 752 804 2.6E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_1810 3f746837e730646b61cf90c95bda3b12 1467 SMART SM00304 103 160 0.0055 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_1810 3f746837e730646b61cf90c95bda3b12 1467 SMART SM00304 384 436 3.4E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_1810 3f746837e730646b61cf90c95bda3b12 1467 SMART SM00304 200 252 2.8E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_1810 3f746837e730646b61cf90c95bda3b12 1467 SMART SM00304 568 620 1.0E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_1810 3f746837e730646b61cf90c95bda3b12 1467 SMART SM00065 828 973 7.5E-8 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_1810 3f746837e730646b61cf90c95bda3b12 1467 Gene3D G3DSA:2.60.120.260 657 755 5.6E-12 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_1810 3f746837e730646b61cf90c95bda3b12 1467 Gene3D G3DSA:2.60.120.260 565 656 1.8E-11 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_1810 3f746837e730646b61cf90c95bda3b12 1467 Gene3D G3DSA:2.60.120.260 474 564 2.4E-10 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_1810 3f746837e730646b61cf90c95bda3b12 1467 Gene3D G3DSA:2.60.120.260 286 379 3.0E-11 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_1810 3f746837e730646b61cf90c95bda3b12 1467 Gene3D G3DSA:2.60.120.260 380 473 1.3E-11 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_1810 3f746837e730646b61cf90c95bda3b12 1467 SMART SM00448 1338 1452 4.2E-34 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_1810 3f746837e730646b61cf90c95bda3b12 1467 SUPERFAMILY SSF55874 1098 1279 3.27E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_1810 3f746837e730646b61cf90c95bda3b12 1467 SMART SM00387 1156 1281 7.8E-39 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_1810 3f746837e730646b61cf90c95bda3b12 1467 SUPERFAMILY SSF58104 220 537 2.09E-18 T 14-10-2018 AMIS_1810 3f746837e730646b61cf90c95bda3b12 1467 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1156 1279 3.4E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_1810 3f746837e730646b61cf90c95bda3b12 1467 Pfam PF00512 His Kinase A (phospho-acceptor) domain 1042 1109 2.2E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_1810 3f746837e730646b61cf90c95bda3b12 1467 SUPERFAMILY SSF55781 791 964 2.71E-25 T 14-10-2018 AMIS_1810 3f746837e730646b61cf90c95bda3b12 1467 Gene3D G3DSA:1.10.8.500 203 259 1.6E-8 T 14-10-2018 AMIS_1810 3f746837e730646b61cf90c95bda3b12 1467 Gene3D G3DSA:1.10.8.500 756 814 1.4E-5 T 14-10-2018 AMIS_1810 3f746837e730646b61cf90c95bda3b12 1467 Gene3D G3DSA:1.10.287.130 1027 1109 2.0E-23 T 14-10-2018 AMIS_1810 3f746837e730646b61cf90c95bda3b12 1467 Pfam PF13185 GAF domain 826 963 3.5E-15 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_1810 3f746837e730646b61cf90c95bda3b12 1467 SUPERFAMILY SSF58104 496 719 6.67E-16 T 14-10-2018 AMIS_1810 3f746837e730646b61cf90c95bda3b12 1467 SUPERFAMILY SSF52172 1333 1460 3.27E-36 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_1810 3f746837e730646b61cf90c95bda3b12 1467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1265 1278 8.4E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_1810 3f746837e730646b61cf90c95bda3b12 1467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1206 1220 8.4E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_1810 3f746837e730646b61cf90c95bda3b12 1467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1241 1259 8.4E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_1810 3f746837e730646b61cf90c95bda3b12 1467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1224 1234 8.4E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_75920 0b67ea211f7de090352ccaa9a2ae19a2 70 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 16 63 5.6E-19 T 14-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 AMIS_75920 0b67ea211f7de090352ccaa9a2ae19a2 70 Pfam PF12728 Helix-turn-helix domain 16 64 2.5E-13 T 14-10-2018 AMIS_75920 0b67ea211f7de090352ccaa9a2ae19a2 70 Gene3D G3DSA:1.10.1660.10 14 65 3.3E-10 T 14-10-2018 AMIS_52640 ca5e0179f00d378d819e4d73f7acb837 181 SUPERFAMILY SSF159234 56 164 4.71E-16 T 14-10-2018 IPR035930 FomD-like superfamily AMIS_52640 ca5e0179f00d378d819e4d73f7acb837 181 Pfam PF04167 Protein of unknown function (DUF402) 61 127 8.0E-13 T 14-10-2018 IPR007295 Domain of unknown function DUF402 AMIS_52640 ca5e0179f00d378d819e4d73f7acb837 181 Gene3D G3DSA:2.40.380.10 23 168 6.7E-7 T 14-10-2018 IPR035930 FomD-like superfamily AMIS_46340 7d56364df08174ee90d9cfdaf3f4bf3e 723 SUPERFAMILY SSF63829 112 551 5.89E-7 T 14-10-2018 AMIS_46340 7d56364df08174ee90d9cfdaf3f4bf3e 723 Pfam PF13449 Esterase-like activity of phytase 392 699 5.2E-55 T 14-10-2018 IPR027372 Phytase-like domain AMIS_46340 7d56364df08174ee90d9cfdaf3f4bf3e 723 Pfam PF13449 Esterase-like activity of phytase 55 334 2.9E-58 T 14-10-2018 IPR027372 Phytase-like domain AMIS_46340 7d56364df08174ee90d9cfdaf3f4bf3e 723 SUPERFAMILY SSF50974 8 259 7.59E-10 T 14-10-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 AMIS_35400 ee3466cd547294cda2e9bc59b00467fd 252 Gene3D G3DSA:3.40.50.720 6 252 4.9E-55 T 14-10-2018 AMIS_35400 ee3466cd547294cda2e9bc59b00467fd 252 SUPERFAMILY SSF51735 7 249 1.37E-55 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_35400 ee3466cd547294cda2e9bc59b00467fd 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 2.9E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_35400 ee3466cd547294cda2e9bc59b00467fd 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 2.9E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_35400 ee3466cd547294cda2e9bc59b00467fd 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 2.9E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_35400 ee3466cd547294cda2e9bc59b00467fd 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.9E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_35400 ee3466cd547294cda2e9bc59b00467fd 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 2.9E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_35400 ee3466cd547294cda2e9bc59b00467fd 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 2.9E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_35400 ee3466cd547294cda2e9bc59b00467fd 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 247 4.8E-36 T 14-10-2018 AMIS_420 e45b0a67955a5e62d3fb11cc361bcd5d 160 Gene3D G3DSA:2.60.200.20 55 159 8.8E-26 T 14-10-2018 AMIS_420 e45b0a67955a5e62d3fb11cc361bcd5d 160 Pfam PF00498 FHA domain 88 151 5.1E-14 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 AMIS_420 e45b0a67955a5e62d3fb11cc361bcd5d 160 SUPERFAMILY SSF49879 66 158 4.97E-24 T 14-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 AMIS_420 e45b0a67955a5e62d3fb11cc361bcd5d 160 SMART SM00240 87 137 4.3E-13 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 AMIS_2850 e1d01c1849b34f3b73c7724e23195391 239 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 148 208 1.0E-18 T 14-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_2850 e1d01c1849b34f3b73c7724e23195391 239 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 99 219 7.6E-46 T 14-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_2850 e1d01c1849b34f3b73c7724e23195391 239 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 71 227 29.563 T 14-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_2850 e1d01c1849b34f3b73c7724e23195391 239 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 98 218 3.4E-45 T 14-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_2850 e1d01c1849b34f3b73c7724e23195391 239 SUPERFAMILY SSF143243 77 235 2.62E-50 T 14-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_2850 e1d01c1849b34f3b73c7724e23195391 239 Gene3D G3DSA:3.30.460.80 54 199 5.0E-49 T 14-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_55370 b3df120e22da5be21d3e163aeae454d5 543 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 348 509 1.6E-33 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_55370 b3df120e22da5be21d3e163aeae454d5 543 SUPERFAMILY SSF58104 248 541 2.49E-60 T 14-10-2018 AMIS_55370 b3df120e22da5be21d3e163aeae454d5 543 Gene3D G3DSA:1.10.287.950 228 542 6.3E-64 T 14-10-2018 AMIS_55370 b3df120e22da5be21d3e163aeae454d5 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 415 444 1.2E-25 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_55370 b3df120e22da5be21d3e163aeae454d5 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 22 47 1.2E-25 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_55370 b3df120e22da5be21d3e163aeae454d5 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 309 338 1.2E-25 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_55370 b3df120e22da5be21d3e163aeae454d5 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 78 93 1.2E-25 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_55370 b3df120e22da5be21d3e163aeae454d5 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 463 492 1.2E-25 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_55370 b3df120e22da5be21d3e163aeae454d5 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 386 413 1.2E-25 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_55370 b3df120e22da5be21d3e163aeae454d5 543 SMART SM00283 295 542 5.6E-49 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_55370 b3df120e22da5be21d3e163aeae454d5 543 SMART SM00304 228 280 4.2E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_55370 b3df120e22da5be21d3e163aeae454d5 543 Pfam PF12729 Four helix bundle sensory module for signal transduction 22 201 6.7E-16 T 14-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain AMIS_28330 9f70065df5cf4476fad3f37b9d0bbbc7 677 SUPERFAMILY SSF75005 184 465 1.57E-62 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMIS_28330 9f70065df5cf4476fad3f37b9d0bbbc7 677 Gene3D G3DSA:2.60.120.200 477 673 8.1E-65 T 14-10-2018 AMIS_28330 9f70065df5cf4476fad3f37b9d0bbbc7 677 SUPERFAMILY SSF49899 479 673 5.54E-29 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily AMIS_28330 9f70065df5cf4476fad3f37b9d0bbbc7 677 Pfam PF14200 Ricin-type beta-trefoil lectin domain-like 36 113 3.8E-22 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_28330 9f70065df5cf4476fad3f37b9d0bbbc7 677 Pfam PF14200 Ricin-type beta-trefoil lectin domain-like 119 178 1.9E-12 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_28330 9f70065df5cf4476fad3f37b9d0bbbc7 677 SMART SM00458 37 172 2.2E-10 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_28330 9f70065df5cf4476fad3f37b9d0bbbc7 677 Gene3D G3DSA:2.80.10.50 129 182 4.9E-11 T 14-10-2018 AMIS_28330 9f70065df5cf4476fad3f37b9d0bbbc7 677 Gene3D G3DSA:2.80.10.50 75 128 5.4E-19 T 14-10-2018 AMIS_28330 9f70065df5cf4476fad3f37b9d0bbbc7 677 Gene3D G3DSA:2.115.10.20 183 473 2.8E-67 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMIS_28330 9f70065df5cf4476fad3f37b9d0bbbc7 677 Gene3D G3DSA:2.80.10.50 26 74 1.5E-10 T 14-10-2018 AMIS_28330 9f70065df5cf4476fad3f37b9d0bbbc7 677 Pfam PF04616 Glycosyl hydrolases family 43 184 448 1.0E-36 T 14-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 AMIS_28330 9f70065df5cf4476fad3f37b9d0bbbc7 677 SUPERFAMILY SSF50370 35 172 2.3E-44 T 14-10-2018 IPR035992 Ricin B-like lectins AMIS_49200 d6006b4a985a455a36b8e103f91b60c7 339 ProSitePatterns PS00356 LacI-type HTH domain signature. 11 29 - T 14-10-2018 AMIS_49200 d6006b4a985a455a36b8e103f91b60c7 339 Gene3D G3DSA:1.10.260.40 1 61 4.8E-22 T 14-10-2018 AMIS_49200 d6006b4a985a455a36b8e103f91b60c7 339 SUPERFAMILY SSF53822 68 337 8.44E-59 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_49200 d6006b4a985a455a36b8e103f91b60c7 339 Pfam PF00356 Bacterial regulatory proteins, lacI family 10 55 1.2E-17 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_49200 d6006b4a985a455a36b8e103f91b60c7 339 SUPERFAMILY SSF47413 8 66 1.72E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_49200 d6006b4a985a455a36b8e103f91b60c7 339 Gene3D G3DSA:3.40.50.2300 166 296 1.8E-61 T 14-10-2018 AMIS_49200 d6006b4a985a455a36b8e103f91b60c7 339 SMART SM00354 8 78 3.7E-26 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_49200 d6006b4a985a455a36b8e103f91b60c7 339 Gene3D G3DSA:3.40.50.2300 62 312 1.8E-61 T 14-10-2018 AMIS_49200 d6006b4a985a455a36b8e103f91b60c7 339 Pfam PF13377 Periplasmic binding protein-like domain 174 335 2.5E-30 T 14-10-2018 AMIS_49200 d6006b4a985a455a36b8e103f91b60c7 339 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 20 30 7.5E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_49200 d6006b4a985a455a36b8e103f91b60c7 339 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 10 20 7.5E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_51800 b22852cf6ead1a3dbebfc3a73a2fe5db 745 Gene3D G3DSA:1.10.8.280 145 253 2.9E-155 T 14-10-2018 AMIS_51800 b22852cf6ead1a3dbebfc3a73a2fe5db 745 SUPERFAMILY SSF52540 457 717 7.82E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_51800 b22852cf6ead1a3dbebfc3a73a2fe5db 745 Gene3D G3DSA:1.20.1580.10 538 576 2.8E-97 T 14-10-2018 AMIS_51800 b22852cf6ead1a3dbebfc3a73a2fe5db 745 Gene3D G3DSA:1.20.1580.10 92 331 2.9E-155 T 14-10-2018 AMIS_51800 b22852cf6ead1a3dbebfc3a73a2fe5db 745 SUPERFAMILY SSF52540 8 421 2.12E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_51800 b22852cf6ead1a3dbebfc3a73a2fe5db 745 SMART SM00382 24 408 4.0 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_51800 b22852cf6ead1a3dbebfc3a73a2fe5db 745 SMART SM00382 471 710 0.033 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_51800 b22852cf6ead1a3dbebfc3a73a2fe5db 745 Pfam PF00005 ABC transporter 462 665 9.3E-11 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_51800 b22852cf6ead1a3dbebfc3a73a2fe5db 745 Gene3D G3DSA:3.40.50.300 457 739 2.8E-97 T 14-10-2018 AMIS_51800 b22852cf6ead1a3dbebfc3a73a2fe5db 745 Gene3D G3DSA:3.40.50.300 6 432 2.9E-155 T 14-10-2018 AMIS_37220 4637511b0cb0434e9efb7ccd7489e5cc 247 SMART SM00020 38 238 1.2E-24 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 AMIS_37220 4637511b0cb0434e9efb7ccd7489e5cc 247 Gene3D G3DSA:2.40.10.10 105 243 8.6E-19 T 14-10-2018 AMIS_37220 4637511b0cb0434e9efb7ccd7489e5cc 247 Gene3D G3DSA:2.40.10.10 39 104 2.2E-7 T 14-10-2018 AMIS_37220 4637511b0cb0434e9efb7ccd7489e5cc 247 SUPERFAMILY SSF50494 32 243 1.12E-34 T 14-10-2018 IPR009003 Peptidase S1, PA clan AMIS_37220 4637511b0cb0434e9efb7ccd7489e5cc 247 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 59 74 2.1E-8 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AMIS_37220 4637511b0cb0434e9efb7ccd7489e5cc 247 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 102 116 2.1E-8 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AMIS_37220 4637511b0cb0434e9efb7ccd7489e5cc 247 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 186 198 2.1E-8 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AMIS_37220 4637511b0cb0434e9efb7ccd7489e5cc 247 Pfam PF00089 Trypsin 40 238 4.8E-25 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 AMIS_32630 261bf81619207a3fe70c927ad714c659 183 SUPERFAMILY SSF160379 3 180 6.67E-38 T 14-10-2018 AMIS_32630 261bf81619207a3fe70c927ad714c659 183 Pfam PF08002 Protein of unknown function (DUF1697) 2 139 4.5E-34 T 14-10-2018 IPR012545 Protein of unknown function DUF1697 AMIS_32630 261bf81619207a3fe70c927ad714c659 183 PIRSF PIRSF008502 1 182 1.3E-36 T 14-10-2018 IPR012545 Protein of unknown function DUF1697 AMIS_32630 261bf81619207a3fe70c927ad714c659 183 Gene3D G3DSA:3.30.70.1280 1 91 7.0E-23 T 14-10-2018 AMIS_15380 3f8808151261d32967bba5df58f71989 1177 Gene3D G3DSA:1.10.10.1600 448 535 6.9E-23 T 14-10-2018 AMIS_15380 3f8808151261d32967bba5df58f71989 1177 Pfam PF02811 PHP domain 7 193 2.7E-43 T 14-10-2018 IPR004013 PHP domain GO:0003824 AMIS_15380 3f8808151261d32967bba5df58f71989 1177 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 314 754 2.5E-164 T 14-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMIS_15380 3f8808151261d32967bba5df58f71989 1177 Pfam PF14579 Helix-hairpin-helix motif 828 915 2.1E-25 T 14-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMIS_15380 3f8808151261d32967bba5df58f71989 1177 SUPERFAMILY SSF89550 5 246 1.16E-27 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AMIS_15380 3f8808151261d32967bba5df58f71989 1177 SMART SM00481 6 73 1.2E-32 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal AMIS_15380 3f8808151261d32967bba5df58f71989 1177 Gene3D G3DSA:3.20.20.140 2 292 4.4E-88 T 14-10-2018 AMIS_15380 3f8808151261d32967bba5df58f71989 1177 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 5 1056 0.0 T 14-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMIS_50570 7aa4cb7afce9458e53fa378ed9952116 386 Gene3D G3DSA:3.40.710.30 7 386 1.2E-105 T 14-10-2018 AMIS_50570 7aa4cb7afce9458e53fa378ed9952116 386 Pfam PF00144 Beta-lactamase 24 377 1.0E-59 T 14-10-2018 IPR001466 Beta-lactamase-related AMIS_50570 7aa4cb7afce9458e53fa378ed9952116 386 SUPERFAMILY SSF56601 15 382 1.91E-64 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMIS_53040 a901a73cb275ae08f8eab80c390219ef 245 Pfam PF09359 VTC domain 23 114 3.7E-7 T 14-10-2018 IPR018966 VTC domain AMIS_56260 482b5346e7190d33fa0210a11cd64d34 72 Pfam PF00381 PTS HPr component phosphorylation site 1 69 5.2E-19 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like AMIS_56260 482b5346e7190d33fa0210a11cd64d34 72 PRINTS PR00107 Phosphocarrier protein signature 40 57 1.2E-5 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like AMIS_56260 482b5346e7190d33fa0210a11cd64d34 72 PRINTS PR00107 Phosphocarrier protein signature 25 40 1.2E-5 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like AMIS_56260 482b5346e7190d33fa0210a11cd64d34 72 SUPERFAMILY SSF55594 1 69 6.93E-18 T 14-10-2018 IPR035895 HPr-like superfamily AMIS_56260 482b5346e7190d33fa0210a11cd64d34 72 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 68 1.0E-19 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like AMIS_56260 482b5346e7190d33fa0210a11cd64d34 72 Gene3D G3DSA:3.30.1340.10 1 71 5.2E-20 T 14-10-2018 IPR035895 HPr-like superfamily AMIS_72110 bb76b22c29bd3d9ac3d68d08c57ee676 74 Pfam PF01197 Ribosomal protein L31 1 66 5.4E-32 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_72110 bb76b22c29bd3d9ac3d68d08c57ee676 74 ProSitePatterns PS01143 Ribosomal protein L31 signature. 36 57 - T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_72110 bb76b22c29bd3d9ac3d68d08c57ee676 74 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 69 29.01 T 14-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_72110 bb76b22c29bd3d9ac3d68d08c57ee676 74 SUPERFAMILY SSF143800 1 67 3.18E-25 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_72110 bb76b22c29bd3d9ac3d68d08c57ee676 74 Gene3D G3DSA:2.30.170.50 1 70 1.1E-31 T 14-10-2018 AMIS_72110 bb76b22c29bd3d9ac3d68d08c57ee676 74 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.4E-20 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_72110 bb76b22c29bd3d9ac3d68d08c57ee676 74 PRINTS PR01249 Ribosomal protein L31 signature 47 65 1.4E-20 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_72110 bb76b22c29bd3d9ac3d68d08c57ee676 74 PRINTS PR01249 Ribosomal protein L31 signature 32 47 1.4E-20 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_72110 bb76b22c29bd3d9ac3d68d08c57ee676 74 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 67 8.2E-32 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_26160 949e5eeb4949f4457e3c3277d44c5956 586 SUPERFAMILY SSF47384 361 439 2.35E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_26160 949e5eeb4949f4457e3c3277d44c5956 586 SMART SM00388 374 438 1.1E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_26160 949e5eeb4949f4457e3c3277d44c5956 586 Gene3D G3DSA:1.10.287.130 369 437 8.1E-15 T 14-10-2018 AMIS_26160 949e5eeb4949f4457e3c3277d44c5956 586 SUPERFAMILY SSF55874 427 585 2.88E-48 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_26160 949e5eeb4949f4457e3c3277d44c5956 586 Gene3D G3DSA:3.30.565.10 438 586 4.4E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_26160 949e5eeb4949f4457e3c3277d44c5956 586 SMART SM00387 480 586 5.6E-44 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_26160 949e5eeb4949f4457e3c3277d44c5956 586 PRINTS PR00344 Bacterial sensor protein C-terminal signature 531 541 2.4E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_26160 949e5eeb4949f4457e3c3277d44c5956 586 PRINTS PR00344 Bacterial sensor protein C-terminal signature 572 585 2.4E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_26160 949e5eeb4949f4457e3c3277d44c5956 586 PRINTS PR00344 Bacterial sensor protein C-terminal signature 513 527 2.4E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_26160 949e5eeb4949f4457e3c3277d44c5956 586 PRINTS PR00344 Bacterial sensor protein C-terminal signature 548 566 2.4E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_26160 949e5eeb4949f4457e3c3277d44c5956 586 Pfam PF00512 His Kinase A (phospho-acceptor) domain 375 438 2.7E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_26160 949e5eeb4949f4457e3c3277d44c5956 586 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 481 585 5.1E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_45320 df2ee3a0a9e6e561a17efbbc32067d24 147 Pfam PF10002 Predicted membrane protein (DUF2243) 9 137 1.3E-46 T 14-10-2018 IPR018719 Protein of unknown function DUF2243, membrane AMIS_3680 943d56051408211f7c5a10f97a1b3458 800 Pfam PF13625 Helicase conserved C-terminal domain 505 627 2.7E-40 T 14-10-2018 IPR032830 Helicase XPB/Ssl2, N-terminal domain Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167246|Reactome: R-HSA-427413|Reactome: R-HSA-5696395|Reactome: R-HSA-5696400|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73863|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-77075 AMIS_71490 142aa03a52af3cc4be42141d2b155bd6 719 Gene3D G3DSA:3.90.640.10 210 290 1.8E-95 T 14-10-2018 AMIS_71490 142aa03a52af3cc4be42141d2b155bd6 719 Gene3D G3DSA:3.30.420.40 13 350 1.8E-95 T 14-10-2018 AMIS_71490 142aa03a52af3cc4be42141d2b155bd6 719 Pfam PF00012 Hsp70 protein 89 357 7.5E-36 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMIS_71490 142aa03a52af3cc4be42141d2b155bd6 719 SUPERFAMILY SSF53067 12 162 2.59E-27 T 14-10-2018 AMIS_71490 142aa03a52af3cc4be42141d2b155bd6 719 PRINTS PR00301 70kDa heat shock protein signature 11 24 1.4E-10 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMIS_71490 142aa03a52af3cc4be42141d2b155bd6 719 PRINTS PR00301 70kDa heat shock protein signature 340 360 1.4E-10 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMIS_71490 142aa03a52af3cc4be42141d2b155bd6 719 PRINTS PR00301 70kDa heat shock protein signature 121 141 1.4E-10 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMIS_71490 142aa03a52af3cc4be42141d2b155bd6 719 PRINTS PR00301 70kDa heat shock protein signature 184 194 1.4E-10 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMIS_71490 142aa03a52af3cc4be42141d2b155bd6 719 PRINTS PR00301 70kDa heat shock protein signature 309 325 1.4E-10 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMIS_71490 142aa03a52af3cc4be42141d2b155bd6 719 Gene3D G3DSA:3.30.420.40 171 340 1.8E-95 T 14-10-2018 AMIS_71490 142aa03a52af3cc4be42141d2b155bd6 719 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 312 326 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AMIS_71490 142aa03a52af3cc4be42141d2b155bd6 719 SUPERFAMILY SSF53067 174 356 1.91E-34 T 14-10-2018 AMIS_73070 1acf275b7ca33e544c9f0222c4e7b8a4 363 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 35 343 25.137 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 AMIS_73070 1acf275b7ca33e544c9f0222c4e7b8a4 363 Pfam PF03193 RsgA GTPase 99 278 1.2E-39 T 14-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 AMIS_73070 1acf275b7ca33e544c9f0222c4e7b8a4 363 Gene3D G3DSA:3.40.50.300 107 278 9.7E-38 T 14-10-2018 AMIS_73070 1acf275b7ca33e544c9f0222c4e7b8a4 363 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 73 336 1.2E-39 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 AMIS_73070 1acf275b7ca33e544c9f0222c4e7b8a4 363 SUPERFAMILY SSF52540 119 338 1.07E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_70970 3466cf9c977d685cdb2afa7aafd05d0d 228 SMART SM00346 4 88 2.0E-15 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AMIS_70970 3466cf9c977d685cdb2afa7aafd05d0d 228 SUPERFAMILY SSF55781 75 226 1.37E-34 T 14-10-2018 AMIS_70970 3466cf9c977d685cdb2afa7aafd05d0d 228 Gene3D G3DSA:3.30.450.40 70 228 2.2E-37 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_70970 3466cf9c977d685cdb2afa7aafd05d0d 228 Pfam PF01614 Bacterial transcriptional regulator 120 221 5.4E-17 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal AMIS_70970 3466cf9c977d685cdb2afa7aafd05d0d 228 SUPERFAMILY SSF46785 7 71 3.81E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_70970 3466cf9c977d685cdb2afa7aafd05d0d 228 Pfam PF09339 IclR helix-turn-helix domain 13 53 9.8E-9 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AMIS_70970 3466cf9c977d685cdb2afa7aafd05d0d 228 Gene3D G3DSA:1.10.10.10 3 69 2.3E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_23660 673a38be9921bf1c6e14d79a60eaeeb2 211 SUPERFAMILY SSF46689 9 77 1.08E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_23660 673a38be9921bf1c6e14d79a60eaeeb2 211 Gene3D G3DSA:1.10.357.10 55 198 9.5E-29 T 14-10-2018 AMIS_23660 673a38be9921bf1c6e14d79a60eaeeb2 211 Gene3D G3DSA:1.10.10.60 1 53 1.2E-16 T 14-10-2018 AMIS_23660 673a38be9921bf1c6e14d79a60eaeeb2 211 SUPERFAMILY SSF48498 84 199 4.85E-19 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_23660 673a38be9921bf1c6e14d79a60eaeeb2 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 63 9.2E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_37380 e41bd592f2c15b923080163ebff079e2 230 Gene3D G3DSA:1.10.1760.20 6 212 1.1E-55 T 14-10-2018 AMIS_37380 e41bd592f2c15b923080163ebff079e2 230 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 7 213 3.4E-55 T 14-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 AMIS_75520 378776818be9f37636d7c0632970ae7a 302 Pfam PF00892 EamA-like transporter family 10 140 2.3E-8 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMIS_75520 378776818be9f37636d7c0632970ae7a 302 Pfam PF00892 EamA-like transporter family 155 288 1.0E-16 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMIS_75520 378776818be9f37636d7c0632970ae7a 302 SUPERFAMILY SSF103481 196 291 1.09E-13 T 14-10-2018 AMIS_75520 378776818be9f37636d7c0632970ae7a 302 SUPERFAMILY SSF103481 39 143 9.94E-10 T 14-10-2018 AMIS_35530 357906de4e470544cb89ad18bdc80494 612 SUPERFAMILY SSF52172 485 602 1.57E-26 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_35530 357906de4e470544cb89ad18bdc80494 612 Gene3D G3DSA:1.10.287.130 230 299 2.4E-19 T 14-10-2018 AMIS_35530 357906de4e470544cb89ad18bdc80494 612 Pfam PF00072 Response regulator receiver domain 488 597 3.0E-17 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_35530 357906de4e470544cb89ad18bdc80494 612 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 462 5.2E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_35530 357906de4e470544cb89ad18bdc80494 612 PRINTS PR00344 Bacterial sensor protein C-terminal signature 394 408 5.2E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_35530 357906de4e470544cb89ad18bdc80494 612 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 422 5.2E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_35530 357906de4e470544cb89ad18bdc80494 612 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 443 5.2E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_35530 357906de4e470544cb89ad18bdc80494 612 SUPERFAMILY SSF47384 223 299 1.43E-9 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_35530 357906de4e470544cb89ad18bdc80494 612 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 343 463 5.7E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_35530 357906de4e470544cb89ad18bdc80494 612 Gene3D G3DSA:3.30.565.10 302 470 4.0E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_35530 357906de4e470544cb89ad18bdc80494 612 SMART SM00388 237 301 4.1E-5 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_35530 357906de4e470544cb89ad18bdc80494 612 Gene3D G3DSA:3.40.50.2300 481 604 1.6E-22 T 14-10-2018 AMIS_35530 357906de4e470544cb89ad18bdc80494 612 SUPERFAMILY SSF55874 291 464 1.44E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_35530 357906de4e470544cb89ad18bdc80494 612 SMART SM00387 342 465 2.3E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_35530 357906de4e470544cb89ad18bdc80494 612 SMART SM00448 486 597 1.2E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_5850 5106099b6351c7c88b7097acf5e9fe13 150 Gene3D G3DSA:3.10.129.10 1 150 2.2E-49 T 14-10-2018 AMIS_5850 5106099b6351c7c88b7097acf5e9fe13 150 Pfam PF13452 N-terminal half of MaoC dehydratase 7 137 1.6E-37 T 14-10-2018 IPR039569 N-terminal of MaoC-like dehydratase Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241|Reactome: R-HSA-9033500 AMIS_5850 5106099b6351c7c88b7097acf5e9fe13 150 PIRSF PIRSF018072 1 150 1.8E-58 T 14-10-2018 IPR016709 Uncharacterised protein family UPF0336 AMIS_5850 5106099b6351c7c88b7097acf5e9fe13 150 Hamap MF_00799 UPF0336 protein . 1 148 33.5 T 14-10-2018 IPR016709 Uncharacterised protein family UPF0336 AMIS_5850 5106099b6351c7c88b7097acf5e9fe13 150 SUPERFAMILY SSF54637 8 147 8.15E-40 T 14-10-2018 IPR029069 HotDog domain superfamily AMIS_69930 7b41df3546b7808116cd103fe8f638af 211 Pfam PF03551 Transcriptional regulator PadR-like family 76 144 1.8E-21 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal AMIS_69930 7b41df3546b7808116cd103fe8f638af 211 Gene3D G3DSA:1.10.10.10 66 166 2.4E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_69930 7b41df3546b7808116cd103fe8f638af 211 SUPERFAMILY SSF46785 61 148 1.1E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_53320 776117bb27a2991ad487249f8359484c 210 SUPERFAMILY SSF49879 107 203 1.03E-20 T 14-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 AMIS_53320 776117bb27a2991ad487249f8359484c 210 Pfam PF00498 FHA domain 124 199 1.8E-13 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 AMIS_53320 776117bb27a2991ad487249f8359484c 210 SMART SM00240 123 180 8.0E-7 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 AMIS_53320 776117bb27a2991ad487249f8359484c 210 Gene3D G3DSA:2.60.200.20 101 209 2.2E-19 T 14-10-2018 AMIS_40940 41fcea0ad8e19077715ef0a6d00f158e 139 Pfam PF12840 Helix-turn-helix domain 22 81 4.0E-15 T 14-10-2018 AMIS_40940 41fcea0ad8e19077715ef0a6d00f158e 139 Gene3D G3DSA:1.10.10.10 13 119 2.5E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_40940 41fcea0ad8e19077715ef0a6d00f158e 139 SUPERFAMILY SSF46785 18 113 4.78E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_40940 41fcea0ad8e19077715ef0a6d00f158e 139 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 72 87 3.2E-6 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_40940 41fcea0ad8e19077715ef0a6d00f158e 139 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 25 40 3.2E-6 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_40940 41fcea0ad8e19077715ef0a6d00f158e 139 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 57 72 3.2E-6 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_40940 41fcea0ad8e19077715ef0a6d00f158e 139 SMART SM00418 23 101 8.4E-15 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_77710 47066e74907c4807265f360e31e4ede9 502 SUPERFAMILY SSF50249 14 154 1.87E-34 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMIS_77710 47066e74907c4807265f360e31e4ede9 502 Pfam PF00152 tRNA synthetases class II (D, K and N) 161 499 4.2E-71 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMIS_77710 47066e74907c4807265f360e31e4ede9 502 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 16 501 6.7E-146 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AMIS_77710 47066e74907c4807265f360e31e4ede9 502 Gene3D G3DSA:2.40.50.140 16 154 3.2E-38 T 14-10-2018 AMIS_77710 47066e74907c4807265f360e31e4ede9 502 Pfam PF01336 OB-fold nucleic acid binding domain 67 144 3.9E-11 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AMIS_77710 47066e74907c4807265f360e31e4ede9 502 Gene3D G3DSA:3.30.930.10 160 502 4.5E-112 T 14-10-2018 AMIS_77710 47066e74907c4807265f360e31e4ede9 502 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 21 502 35.862 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AMIS_77710 47066e74907c4807265f360e31e4ede9 502 SUPERFAMILY SSF55681 161 500 3.06E-100 T 14-10-2018 AMIS_77710 47066e74907c4807265f360e31e4ede9 502 PRINTS PR00982 Lysyl-tRNA synthetase signature 243 256 1.3E-32 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AMIS_77710 47066e74907c4807265f360e31e4ede9 502 PRINTS PR00982 Lysyl-tRNA synthetase signature 198 208 1.3E-32 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AMIS_77710 47066e74907c4807265f360e31e4ede9 502 PRINTS PR00982 Lysyl-tRNA synthetase signature 214 230 1.3E-32 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AMIS_77710 47066e74907c4807265f360e31e4ede9 502 PRINTS PR00982 Lysyl-tRNA synthetase signature 385 401 1.3E-32 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AMIS_77710 47066e74907c4807265f360e31e4ede9 502 PRINTS PR00982 Lysyl-tRNA synthetase signature 261 278 1.3E-32 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AMIS_55030 432b94522a5ce8ce2b4a9ad59288cd3d 188 Pfam PF01381 Helix-turn-helix 15 68 1.4E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMIS_55030 432b94522a5ce8ce2b4a9ad59288cd3d 188 Pfam PF07883 Cupin domain 113 176 1.3E-10 T 14-10-2018 IPR013096 Cupin 2, conserved barrel AMIS_55030 432b94522a5ce8ce2b4a9ad59288cd3d 188 Gene3D G3DSA:1.10.260.40 1 76 3.5E-19 T 14-10-2018 AMIS_55030 432b94522a5ce8ce2b4a9ad59288cd3d 188 SUPERFAMILY SSF51182 69 176 7.47E-21 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily AMIS_55030 432b94522a5ce8ce2b4a9ad59288cd3d 188 Gene3D G3DSA:2.60.120.10 77 183 7.4E-13 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMIS_55030 432b94522a5ce8ce2b4a9ad59288cd3d 188 SMART SM00530 14 69 8.2E-15 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMIS_55030 432b94522a5ce8ce2b4a9ad59288cd3d 188 SUPERFAMILY SSF47413 10 75 1.94E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_63430 3acdf6a00553adc07ea33c1ddc267f6e 246 PRINTS PR00164 ABC-2 type transport system membrane protein signature 173 192 6.5E-5 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AMIS_63430 3acdf6a00553adc07ea33c1ddc267f6e 246 PRINTS PR00164 ABC-2 type transport system membrane protein signature 193 212 6.5E-5 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AMIS_63430 3acdf6a00553adc07ea33c1ddc267f6e 246 PRINTS PR00164 ABC-2 type transport system membrane protein signature 136 160 6.5E-5 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AMIS_63430 3acdf6a00553adc07ea33c1ddc267f6e 246 PIRSF PIRSF006648 5 246 3.9E-21 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AMIS_63430 3acdf6a00553adc07ea33c1ddc267f6e 246 Pfam PF01061 ABC-2 type transporter 6 207 3.0E-25 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 AMIS_72170 673edc2a3b7345939cecf0f2c764f56f 314 Pfam PF08544 GHMP kinases C terminal 228 269 8.0E-5 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain AMIS_72170 673edc2a3b7345939cecf0f2c764f56f 314 PRINTS PR00958 Homoserine kinase signature 137 150 5.6E-35 T 14-10-2018 AMIS_72170 673edc2a3b7345939cecf0f2c764f56f 314 PRINTS PR00958 Homoserine kinase signature 100 115 5.6E-35 T 14-10-2018 AMIS_72170 673edc2a3b7345939cecf0f2c764f56f 314 PRINTS PR00958 Homoserine kinase signature 17 32 5.6E-35 T 14-10-2018 AMIS_72170 673edc2a3b7345939cecf0f2c764f56f 314 PRINTS PR00958 Homoserine kinase signature 176 193 5.6E-35 T 14-10-2018 AMIS_72170 673edc2a3b7345939cecf0f2c764f56f 314 PRINTS PR00958 Homoserine kinase signature 253 268 5.6E-35 T 14-10-2018 AMIS_72170 673edc2a3b7345939cecf0f2c764f56f 314 Gene3D G3DSA:3.30.70.890 170 276 8.2E-29 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily AMIS_72170 673edc2a3b7345939cecf0f2c764f56f 314 Gene3D G3DSA:3.30.230.10 9 169 5.3E-48 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMIS_72170 673edc2a3b7345939cecf0f2c764f56f 314 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 93 104 - T 14-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 AMIS_72170 673edc2a3b7345939cecf0f2c764f56f 314 Hamap MF_00384 Homoserine kinase [thrB]. 12 296 27.966 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 AMIS_72170 673edc2a3b7345939cecf0f2c764f56f 314 PIRSF PIRSF000676 6 281 1.6E-76 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 AMIS_72170 673edc2a3b7345939cecf0f2c764f56f 314 Pfam PF00288 GHMP kinases N terminal domain 87 150 3.0E-9 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 AMIS_72170 673edc2a3b7345939cecf0f2c764f56f 314 TIGRFAM TIGR00191 thrB: homoserine kinase 10 270 3.2E-60 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 AMIS_72170 673edc2a3b7345939cecf0f2c764f56f 314 SUPERFAMILY SSF54211 10 159 3.57E-29 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMIS_72170 673edc2a3b7345939cecf0f2c764f56f 314 SUPERFAMILY SSF55060 173 270 6.76E-21 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily AMIS_28430 e267c7c55b9ee85dae30eedae374c2af 286 SUPERFAMILY SSF51735 5 270 2.06E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_28430 e267c7c55b9ee85dae30eedae374c2af 286 Gene3D G3DSA:3.40.50.720 7 285 1.2E-60 T 14-10-2018 AMIS_28430 e267c7c55b9ee85dae30eedae374c2af 286 Pfam PF05368 NmrA-like family 7 214 2.9E-20 T 14-10-2018 IPR008030 NmrA-like domain Reactome: R-HSA-70635 AMIS_41980 b6163f861fa9456a581c52941d99d547 406 Gene3D G3DSA:3.60.120.10 126 406 2.8E-81 T 14-10-2018 IPR005801 ADC synthase GO:0009058 AMIS_41980 b6163f861fa9456a581c52941d99d547 406 Pfam PF00425 chorismate binding enzyme 149 396 2.2E-62 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal AMIS_41980 b6163f861fa9456a581c52941d99d547 406 PRINTS PR00095 Anthranilate synthase component I signature 245 258 6.2E-13 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AMIS_41980 b6163f861fa9456a581c52941d99d547 406 PRINTS PR00095 Anthranilate synthase component I signature 259 272 6.2E-13 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AMIS_41980 b6163f861fa9456a581c52941d99d547 406 PRINTS PR00095 Anthranilate synthase component I signature 353 367 6.2E-13 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AMIS_41980 b6163f861fa9456a581c52941d99d547 406 PRINTS PR00095 Anthranilate synthase component I signature 339 353 6.2E-13 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AMIS_41980 b6163f861fa9456a581c52941d99d547 406 SUPERFAMILY SSF56322 139 404 7.33E-78 T 14-10-2018 IPR005801 ADC synthase GO:0009058 AMIS_66770 0383e8ab5f722bac0d6dad6945c9c77e 404 Gene3D G3DSA:3.40.50.410 80 324 6.7E-43 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMIS_66770 0383e8ab5f722bac0d6dad6945c9c77e 404 SUPERFAMILY SSF53300 84 324 5.12E-27 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMIS_66770 0383e8ab5f722bac0d6dad6945c9c77e 404 Pfam PF07584 Aerotolerance regulator N-terminal 1 72 5.8E-8 T 14-10-2018 IPR024163 Aerotolerance regulator, N-terminal AMIS_66770 0383e8ab5f722bac0d6dad6945c9c77e 404 SMART SM00327 85 266 1.5E-12 T 14-10-2018 IPR002035 von Willebrand factor, type A AMIS_66770 0383e8ab5f722bac0d6dad6945c9c77e 404 Pfam PF13519 von Willebrand factor type A domain 88 213 3.5E-16 T 14-10-2018 IPR002035 von Willebrand factor, type A AMIS_59800 82131f387a26ca86c1957e75713f4f8e 257 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 2 253 6.0E-72 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AMIS_59800 82131f387a26ca86c1957e75713f4f8e 257 SUPERFAMILY SSF55920 2 253 2.49E-67 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like AMIS_59800 82131f387a26ca86c1957e75713f4f8e 257 Hamap MF_01974 Methionine aminopeptidase [map]. 2 254 32.029 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AMIS_59800 82131f387a26ca86c1957e75713f4f8e 257 PRINTS PR00599 Methionine aminopeptidase-1 signature 73 86 1.8E-17 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AMIS_59800 82131f387a26ca86c1957e75713f4f8e 257 PRINTS PR00599 Methionine aminopeptidase-1 signature 196 208 1.8E-17 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AMIS_59800 82131f387a26ca86c1957e75713f4f8e 257 PRINTS PR00599 Methionine aminopeptidase-1 signature 165 177 1.8E-17 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AMIS_59800 82131f387a26ca86c1957e75713f4f8e 257 PRINTS PR00599 Methionine aminopeptidase-1 signature 95 111 1.8E-17 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AMIS_59800 82131f387a26ca86c1957e75713f4f8e 257 Pfam PF00557 Metallopeptidase family M24 17 245 1.1E-38 T 14-10-2018 IPR000994 Peptidase M24 AMIS_59800 82131f387a26ca86c1957e75713f4f8e 257 Gene3D G3DSA:3.90.230.10 1 257 7.9E-75 T 14-10-2018 AMIS_51580 10a34ee17128fc9c0b3acbe5c315cff8 217 Gene3D G3DSA:1.10.10.60 7 69 1.1E-19 T 14-10-2018 AMIS_51580 10a34ee17128fc9c0b3acbe5c315cff8 217 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 58 1.5E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_51580 10a34ee17128fc9c0b3acbe5c315cff8 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 3.4E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_51580 10a34ee17128fc9c0b3acbe5c315cff8 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 3.4E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_51580 10a34ee17128fc9c0b3acbe5c315cff8 217 SUPERFAMILY SSF46689 3 70 1.75E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_51580 10a34ee17128fc9c0b3acbe5c315cff8 217 Gene3D G3DSA:1.10.357.10 72 216 4.1E-34 T 14-10-2018 AMIS_51580 10a34ee17128fc9c0b3acbe5c315cff8 217 SUPERFAMILY SSF48498 76 212 1.22E-20 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_51580 10a34ee17128fc9c0b3acbe5c315cff8 217 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 75 188 4.6E-10 T 14-10-2018 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 AMIS_57820 79377b0e767bd2c8e762b02e4611455d 160 SUPERFAMILY SSF54292 1 78 3.54E-22 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AMIS_57820 79377b0e767bd2c8e762b02e4611455d 160 Gene3D G3DSA:1.10.150.120 74 160 3.6E-30 T 14-10-2018 AMIS_57820 79377b0e767bd2c8e762b02e4611455d 160 SUPERFAMILY SSF47741 84 150 2.36E-30 T 14-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily AMIS_57820 79377b0e767bd2c8e762b02e4611455d 160 Pfam PF01799 [2Fe-2S] binding domain 73 145 5.6E-28 T 14-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AMIS_57820 79377b0e767bd2c8e762b02e4611455d 160 Gene3D G3DSA:3.10.20.30 1 73 3.4E-26 T 14-10-2018 IPR012675 Beta-grasp domain superfamily AMIS_57820 79377b0e767bd2c8e762b02e4611455d 160 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 5 54 3.6E-5 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AMIS_40310 7a4b6c5071fa8764b4a4bdd8a1f61f73 174 Pfam PF03413 Peptidase propeptide and YPEB domain 77 135 8.9E-10 T 14-10-2018 IPR025711 PepSY domain AMIS_40310 7a4b6c5071fa8764b4a4bdd8a1f61f73 174 Gene3D G3DSA:3.10.450.40 70 141 3.1E-13 T 14-10-2018 AMIS_60370 bc3c89c0a49dbad90ff67c72d2aef582 152 Pfam PF12802 MarR family 38 98 3.7E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_60370 bc3c89c0a49dbad90ff67c72d2aef582 152 SUPERFAMILY SSF46785 4 146 6.0E-29 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_60370 bc3c89c0a49dbad90ff67c72d2aef582 152 Gene3D G3DSA:1.10.10.10 6 151 1.7E-38 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_60370 bc3c89c0a49dbad90ff67c72d2aef582 152 SMART SM00347 32 135 3.7E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_60370 bc3c89c0a49dbad90ff67c72d2aef582 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 94 110 2.3E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_60370 bc3c89c0a49dbad90ff67c72d2aef582 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 125 145 2.3E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_60370 bc3c89c0a49dbad90ff67c72d2aef582 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 75 90 2.3E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_60370 bc3c89c0a49dbad90ff67c72d2aef582 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 58 74 2.3E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_8160 2690263f15d70ab5bf9f41b4b0c3fb8e 330 SUPERFAMILY SSF53822 64 327 4.87E-41 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_8160 2690263f15d70ab5bf9f41b4b0c3fb8e 330 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 53 9.4E-15 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_8160 2690263f15d70ab5bf9f41b4b0c3fb8e 330 Pfam PF13377 Periplasmic binding protein-like domain 172 324 6.6E-21 T 14-10-2018 AMIS_8160 2690263f15d70ab5bf9f41b4b0c3fb8e 330 Gene3D G3DSA:1.10.260.40 5 64 2.8E-19 T 14-10-2018 AMIS_8160 2690263f15d70ab5bf9f41b4b0c3fb8e 330 SMART SM00354 6 75 2.2E-20 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_8160 2690263f15d70ab5bf9f41b4b0c3fb8e 330 SUPERFAMILY SSF47413 6 62 9.38E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_8160 2690263f15d70ab5bf9f41b4b0c3fb8e 330 ProSitePatterns PS00356 LacI-type HTH domain signature. 9 27 - T 14-10-2018 AMIS_8160 2690263f15d70ab5bf9f41b4b0c3fb8e 330 Gene3D G3DSA:3.40.50.2300 163 321 1.8E-42 T 14-10-2018 AMIS_8160 2690263f15d70ab5bf9f41b4b0c3fb8e 330 Gene3D G3DSA:3.40.50.2300 76 316 1.8E-42 T 14-10-2018 AMIS_37790 89e465b4e4b7ed41ffadcd4ec43527fc 142 SUPERFAMILY SSF159234 46 126 1.31E-13 T 14-10-2018 IPR035930 FomD-like superfamily AMIS_37790 89e465b4e4b7ed41ffadcd4ec43527fc 142 Gene3D G3DSA:2.40.380.10 48 125 4.0E-23 T 14-10-2018 IPR035930 FomD-like superfamily AMIS_79020 aad8df062c32a30bab85cde9a067893b 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 221 4.2E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_79020 aad8df062c32a30bab85cde9a067893b 228 SMART SM00862 148 224 7.1E-26 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_79020 aad8df062c32a30bab85cde9a067893b 228 Gene3D G3DSA:1.10.10.10 128 228 2.6E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_79020 aad8df062c32a30bab85cde9a067893b 228 Pfam PF00072 Response regulator receiver domain 4 112 6.5E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_79020 aad8df062c32a30bab85cde9a067893b 228 Gene3D G3DSA:3.40.50.2300 1 127 1.2E-32 T 14-10-2018 AMIS_79020 aad8df062c32a30bab85cde9a067893b 228 SUPERFAMILY SSF52172 3 183 6.64E-37 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_79020 aad8df062c32a30bab85cde9a067893b 228 SMART SM00448 2 112 7.4E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_32470 6f5daba7391d4035b444965a37c6b644 268 Gene3D G3DSA:1.10.3720.10 1 259 2.6E-61 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_32470 6f5daba7391d4035b444965a37c6b644 268 SUPERFAMILY SSF161098 5 267 7.59E-68 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_32470 6f5daba7391d4035b444965a37c6b644 268 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 256 1.2E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_55460 5fec791986f31ea47355d7567559b1ad 772 SUPERFAMILY SSF51445 11 361 1.6E-57 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_55460 5fec791986f31ea47355d7567559b1ad 772 PRINTS PR00742 Glycosyl hydrolase family 35 signature 304 319 1.4E-17 T 14-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AMIS_55460 5fec791986f31ea47355d7567559b1ad 772 PRINTS PR00742 Glycosyl hydrolase family 35 signature 150 165 1.4E-17 T 14-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AMIS_55460 5fec791986f31ea47355d7567559b1ad 772 PRINTS PR00742 Glycosyl hydrolase family 35 signature 97 116 1.4E-17 T 14-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AMIS_55460 5fec791986f31ea47355d7567559b1ad 772 PRINTS PR00742 Glycosyl hydrolase family 35 signature 21 38 1.4E-17 T 14-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AMIS_55460 5fec791986f31ea47355d7567559b1ad 772 PRINTS PR00742 Glycosyl hydrolase family 35 signature 42 60 1.4E-17 T 14-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AMIS_55460 5fec791986f31ea47355d7567559b1ad 772 Pfam PF01301 Glycosyl hydrolases family 35 21 363 6.9E-49 T 14-10-2018 IPR031330 Glycoside hydrolase 35, catalytic domain KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AMIS_55460 5fec791986f31ea47355d7567559b1ad 772 Gene3D G3DSA:3.20.20.80 8 370 1.2E-91 T 14-10-2018 AMIS_35410 8d56d588d6a701141f2f95d27585e4d6 143 Gene3D G3DSA:1.10.10.10 8 142 5.4E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_35410 8d56d588d6a701141f2f95d27585e4d6 143 SUPERFAMILY SSF46785 12 142 2.98E-30 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_35410 8d56d588d6a701141f2f95d27585e4d6 143 Pfam PF12802 MarR family 23 91 3.2E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_35410 8d56d588d6a701141f2f95d27585e4d6 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 51 67 2.5E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_35410 8d56d588d6a701141f2f95d27585e4d6 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 68 83 2.5E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_35410 8d56d588d6a701141f2f95d27585e4d6 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 117 137 2.5E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_35410 8d56d588d6a701141f2f95d27585e4d6 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 103 2.5E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_35410 8d56d588d6a701141f2f95d27585e4d6 143 SMART SM00347 26 127 2.6E-18 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_68470 139585f11860e1642fe14cc7afc54e68 221 Pfam PF02080 TrkA-C domain 149 214 9.4E-15 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AMIS_68470 139585f11860e1642fe14cc7afc54e68 221 Pfam PF02254 TrkA-N domain 3 118 1.8E-25 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AMIS_68470 139585f11860e1642fe14cc7afc54e68 221 SUPERFAMILY SSF51735 1 145 1.45E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_68470 139585f11860e1642fe14cc7afc54e68 221 Gene3D G3DSA:3.30.70.1450 136 219 1.2E-19 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AMIS_68470 139585f11860e1642fe14cc7afc54e68 221 Gene3D G3DSA:3.40.50.720 2 133 5.7E-30 T 14-10-2018 AMIS_68470 139585f11860e1642fe14cc7afc54e68 221 SUPERFAMILY SSF116726 133 213 3.4E-15 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AMIS_68470 139585f11860e1642fe14cc7afc54e68 221 PRINTS PR00335 TrkA potassium uptake protein signature 59 69 4.7E-9 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AMIS_68470 139585f11860e1642fe14cc7afc54e68 221 PRINTS PR00335 TrkA potassium uptake protein signature 72 86 4.7E-9 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AMIS_68470 139585f11860e1642fe14cc7afc54e68 221 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 4.7E-9 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AMIS_68470 139585f11860e1642fe14cc7afc54e68 221 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 4.7E-9 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AMIS_74420 fa38dca141a0cf1d8fe698f608339e73 284 Gene3D G3DSA:3.30.930.10 3 233 2.8E-66 T 14-10-2018 AMIS_74420 fa38dca141a0cf1d8fe698f608339e73 284 SUPERFAMILY SSF50037 237 282 7.78E-7 T 14-10-2018 IPR008988 Transcriptional repressor, C-terminal AMIS_74420 fa38dca141a0cf1d8fe698f608339e73 284 Gene3D G3DSA:2.30.30.100 236 284 1.2E-14 T 14-10-2018 AMIS_74420 fa38dca141a0cf1d8fe698f608339e73 284 SUPERFAMILY SSF55681 24 219 5.16E-46 T 14-10-2018 AMIS_74420 fa38dca141a0cf1d8fe698f608339e73 284 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 37 282 9.2E-44 T 14-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AMIS_74420 fa38dca141a0cf1d8fe698f608339e73 284 Pfam PF02237 Biotin protein ligase C terminal domain 235 282 5.4E-8 T 14-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AMIS_74420 fa38dca141a0cf1d8fe698f608339e73 284 Pfam PF03099 Biotin/lipoate A/B protein ligase family 54 167 1.7E-12 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 AMIS_70390 c1ddce2c1707bf8bb7999eabdb237c6b 420 SUPERFAMILY SSF52413 307 414 1.15E-22 T 14-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 AMIS_70390 c1ddce2c1707bf8bb7999eabdb237c6b 420 Gene3D G3DSA:3.40.50.720 199 420 2.3E-63 T 14-10-2018 AMIS_70390 c1ddce2c1707bf8bb7999eabdb237c6b 420 PIRSF PIRSF500136 1 420 4.4E-140 T 14-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 AMIS_70390 c1ddce2c1707bf8bb7999eabdb237c6b 420 Gene3D G3DSA:3.40.50.720 1 197 3.1E-54 T 14-10-2018 AMIS_70390 c1ddce2c1707bf8bb7999eabdb237c6b 420 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 320 412 2.1E-17 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AMIS_70390 c1ddce2c1707bf8bb7999eabdb237c6b 420 SUPERFAMILY SSF51735 5 194 6.62E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_70390 c1ddce2c1707bf8bb7999eabdb237c6b 420 SMART SM00984 319 414 2.9E-24 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AMIS_70390 c1ddce2c1707bf8bb7999eabdb237c6b 420 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 5 408 3.6E-123 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AMIS_70390 c1ddce2c1707bf8bb7999eabdb237c6b 420 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 200 292 6.0E-29 T 14-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AMIS_70390 c1ddce2c1707bf8bb7999eabdb237c6b 420 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 5 181 1.2E-32 T 14-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AMIS_70390 c1ddce2c1707bf8bb7999eabdb237c6b 420 PIRSF PIRSF000124 3 419 9.5E-58 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AMIS_70390 c1ddce2c1707bf8bb7999eabdb237c6b 420 SUPERFAMILY SSF48179 200 298 6.29E-30 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMIS_35890 478c699ab54b4f6f48d9e4822b45c02a 353 Pfam PF02627 Carboxymuconolactone decarboxylase family 47 116 9.1E-8 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AMIS_35890 478c699ab54b4f6f48d9e4822b45c02a 353 SUPERFAMILY SSF69118 5 166 3.89E-20 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AMIS_35890 478c699ab54b4f6f48d9e4822b45c02a 353 Gene3D G3DSA:1.20.1290.10 16 166 6.6E-12 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AMIS_35890 478c699ab54b4f6f48d9e4822b45c02a 353 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 69 110 8.8E-11 T 14-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AMIS_63060 5857aab6a7a3385bea829f1870323ba5 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 14-10-2018 IPR019844 Cold-shock conserved site AMIS_63060 5857aab6a7a3385bea829f1870323ba5 67 PIRSF PIRSF002599 1 67 1.7E-26 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 AMIS_63060 5857aab6a7a3385bea829f1870323ba5 67 PRINTS PR00050 Cold shock protein signature 25 34 1.1E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMIS_63060 5857aab6a7a3385bea829f1870323ba5 67 PRINTS PR00050 Cold shock protein signature 4 19 1.1E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMIS_63060 5857aab6a7a3385bea829f1870323ba5 67 PRINTS PR00050 Cold shock protein signature 40 58 1.1E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMIS_63060 5857aab6a7a3385bea829f1870323ba5 67 Gene3D G3DSA:2.40.50.140 1 65 3.1E-30 T 14-10-2018 AMIS_63060 5857aab6a7a3385bea829f1870323ba5 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 1.4E-31 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMIS_63060 5857aab6a7a3385bea829f1870323ba5 67 SMART SM00357 3 67 3.3E-31 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 AMIS_63060 5857aab6a7a3385bea829f1870323ba5 67 SUPERFAMILY SSF50249 1 66 1.4E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMIS_18290 dd342e3260d672d6d0da5fef1a670b35 834 SUPERFAMILY SSF81653 105 196 5.23E-21 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 AMIS_18290 dd342e3260d672d6d0da5fef1a670b35 834 Gene3D G3DSA:2.70.150.20 93 198 1.2E-22 T 14-10-2018 AMIS_18290 dd342e3260d672d6d0da5fef1a670b35 834 Gene3D G3DSA:3.40.50.1000 429 598 1.6E-41 T 14-10-2018 IPR023214 HAD superfamily AMIS_18290 dd342e3260d672d6d0da5fef1a670b35 834 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 509 626 4.4E-25 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AMIS_18290 dd342e3260d672d6d0da5fef1a670b35 834 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 75 330 1.6E-33 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AMIS_18290 dd342e3260d672d6d0da5fef1a670b35 834 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 301 307 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AMIS_18290 dd342e3260d672d6d0da5fef1a670b35 834 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 441 452 1.4E-27 T 14-10-2018 AMIS_18290 dd342e3260d672d6d0da5fef1a670b35 834 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 564 576 1.4E-27 T 14-10-2018 AMIS_18290 dd342e3260d672d6d0da5fef1a670b35 834 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 150 164 1.4E-27 T 14-10-2018 AMIS_18290 dd342e3260d672d6d0da5fef1a670b35 834 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 463 473 1.4E-27 T 14-10-2018 AMIS_18290 dd342e3260d672d6d0da5fef1a670b35 834 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 299 313 1.4E-27 T 14-10-2018 AMIS_18290 dd342e3260d672d6d0da5fef1a670b35 834 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 541 560 1.4E-27 T 14-10-2018 AMIS_18290 dd342e3260d672d6d0da5fef1a670b35 834 ProSitePatterns PS01229 Hypothetical cof family signature 2. 541 563 - T 14-10-2018 AMIS_18290 dd342e3260d672d6d0da5fef1a670b35 834 SUPERFAMILY SSF56784 297 629 1.18E-39 T 14-10-2018 IPR036412 HAD-like superfamily AMIS_18290 dd342e3260d672d6d0da5fef1a670b35 834 Pfam PF00702 haloacid dehalogenase-like hydrolase 295 554 2.2E-23 T 14-10-2018 AMIS_18290 dd342e3260d672d6d0da5fef1a670b35 834 Gene3D G3DSA:1.20.1110.10 199 355 1.6E-13 T 14-10-2018 AMIS_18290 dd342e3260d672d6d0da5fef1a670b35 834 SUPERFAMILY SSF81665 9 817 1.7E-46 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 AMIS_18290 dd342e3260d672d6d0da5fef1a670b35 834 Pfam PF00122 E1-E2 ATPase 105 279 7.7E-34 T 14-10-2018 AMIS_47880 19bc7d486da200dd132c36be7b61431d 135 SUPERFAMILY SSF54593 1 133 1.17E-27 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_47880 19bc7d486da200dd132c36be7b61431d 135 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 131 2.7E-16 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMIS_47880 19bc7d486da200dd132c36be7b61431d 135 Gene3D G3DSA:3.10.180.10 2 135 2.7E-39 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_510 618634522b2277bb0468de4e04aa9d40 256 Pfam PF05949 Bacterial protein of unknown function (DUF881) 102 253 7.9E-41 T 14-10-2018 IPR010273 Protein of unknown function DUF881 AMIS_510 618634522b2277bb0468de4e04aa9d40 256 Gene3D G3DSA:3.30.70.1880 100 256 4.9E-29 T 14-10-2018 AMIS_3140 a0ad0f4a49c73dec2c5c234dc7ccd363 267 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 194 3.9E-19 T 14-10-2018 AMIS_3140 a0ad0f4a49c73dec2c5c234dc7ccd363 267 Gene3D G3DSA:1.20.1440.100 17 93 4.3E-66 T 14-10-2018 AMIS_3140 a0ad0f4a49c73dec2c5c234dc7ccd363 267 Pfam PF12710 haloacid dehalogenase-like hydrolase 6 192 6.7E-34 T 14-10-2018 AMIS_3140 a0ad0f4a49c73dec2c5c234dc7ccd363 267 Gene3D G3DSA:3.40.50.1000 6 218 4.3E-66 T 14-10-2018 IPR023214 HAD superfamily AMIS_3140 a0ad0f4a49c73dec2c5c234dc7ccd363 267 SUPERFAMILY SSF56784 5 215 3.34E-28 T 14-10-2018 IPR036412 HAD-like superfamily AMIS_3140 a0ad0f4a49c73dec2c5c234dc7ccd363 267 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 5 205 1.3E-57 T 14-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like AMIS_36780 cc85bfc1ea3ec1085a42972c89931d29 309 SUPERFAMILY SSF53850 95 301 6.7E-26 T 14-10-2018 AMIS_36780 cc85bfc1ea3ec1085a42972c89931d29 309 Pfam PF03466 LysR substrate binding domain 100 302 2.4E-9 T 14-10-2018 IPR005119 LysR, substrate-binding AMIS_36780 cc85bfc1ea3ec1085a42972c89931d29 309 SUPERFAMILY SSF46785 6 89 5.17E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_36780 cc85bfc1ea3ec1085a42972c89931d29 309 Gene3D G3DSA:1.10.10.10 2 92 1.8E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_36780 cc85bfc1ea3ec1085a42972c89931d29 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 27 38 1.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_36780 cc85bfc1ea3ec1085a42972c89931d29 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 48 1.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_36780 cc85bfc1ea3ec1085a42972c89931d29 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 48 59 1.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_36780 cc85bfc1ea3ec1085a42972c89931d29 309 Gene3D G3DSA:3.40.190.10 175 273 7.8E-44 T 14-10-2018 AMIS_36780 cc85bfc1ea3ec1085a42972c89931d29 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 69 2.2E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_36780 cc85bfc1ea3ec1085a42972c89931d29 309 Gene3D G3DSA:3.40.190.10 95 298 7.8E-44 T 14-10-2018 AMIS_24760 3d1d07d52ce4891c8edfe596b71a9dfb 312 Gene3D G3DSA:3.90.850.10 92 306 9.8E-45 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AMIS_24760 3d1d07d52ce4891c8edfe596b71a9dfb 312 SUPERFAMILY SSF56529 114 296 5.36E-38 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AMIS_24760 3d1d07d52ce4891c8edfe596b71a9dfb 312 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 114 301 9.8E-39 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 AMIS_79040 f95939f4815aac3bc25fad4b88ceef94 646 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 346 502 2.2E-24 T 14-10-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 AMIS_79040 f95939f4815aac3bc25fad4b88ceef94 646 Gene3D G3DSA:2.60.120.260 553 646 2.2E-10 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_79040 f95939f4815aac3bc25fad4b88ceef94 646 Pfam PF01483 Proprotein convertase P-domain 568 645 2.3E-19 T 14-10-2018 IPR002884 P domain GO:0004252|GO:0006508 AMIS_79040 f95939f4815aac3bc25fad4b88ceef94 646 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 198 332 1.5E-25 T 14-10-2018 IPR013856 Peptidase M4 domain GO:0004222 AMIS_79040 f95939f4815aac3bc25fad4b88ceef94 646 SUPERFAMILY SSF49785 537 646 1.32E-22 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_79040 f95939f4815aac3bc25fad4b88ceef94 646 Gene3D G3DSA:1.10.390.10 341 507 1.6E-29 T 14-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily AMIS_79040 f95939f4815aac3bc25fad4b88ceef94 646 SUPERFAMILY SSF55486 196 502 1.76E-49 T 14-10-2018 AMIS_79040 f95939f4815aac3bc25fad4b88ceef94 646 Gene3D G3DSA:3.10.170.10 196 337 2.0E-22 T 14-10-2018 AMIS_79040 f95939f4815aac3bc25fad4b88ceef94 646 Pfam PF07504 Fungalysin/Thermolysin Propeptide Motif 75 104 1.5E-5 T 14-10-2018 IPR011096 FTP domain AMIS_10430 9fb8dee126a5058a65840db3bcb93acf 239 Gene3D G3DSA:1.10.3210.10 36 222 7.8E-29 T 14-10-2018 AMIS_10430 9fb8dee126a5058a65840db3bcb93acf 239 Pfam PF13328 HD domain 45 158 1.2E-10 T 14-10-2018 IPR003607 HD/PDEase domain AMIS_10430 9fb8dee126a5058a65840db3bcb93acf 239 SUPERFAMILY SSF109604 31 208 5.42E-21 T 14-10-2018 AMIS_55260 bee9afddba945850d7f28b2a80bfbef1 213 Pfam PF00072 Response regulator receiver domain 4 115 1.0E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_55260 bee9afddba945850d7f28b2a80bfbef1 213 SMART SM00421 150 207 1.1E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_55260 bee9afddba945850d7f28b2a80bfbef1 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 1.6E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_55260 bee9afddba945850d7f28b2a80bfbef1 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 1.6E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_55260 bee9afddba945850d7f28b2a80bfbef1 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 1.6E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_55260 bee9afddba945850d7f28b2a80bfbef1 213 SUPERFAMILY SSF46894 147 209 4.08E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_55260 bee9afddba945850d7f28b2a80bfbef1 213 SMART SM00448 2 115 1.8E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_55260 bee9afddba945850d7f28b2a80bfbef1 213 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 206 2.9E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_55260 bee9afddba945850d7f28b2a80bfbef1 213 Gene3D G3DSA:3.40.50.12740 2 211 3.4E-67 T 14-10-2018 AMIS_55260 bee9afddba945850d7f28b2a80bfbef1 213 ProSitePatterns PS00622 LuxR-type HTH domain signature. 167 194 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_55260 bee9afddba945850d7f28b2a80bfbef1 213 SUPERFAMILY SSF52172 2 132 6.12E-35 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_47330 7ef9dacea959ec8a0aebb2da8c7dcc9c 305 Gene3D G3DSA:1.20.1260.130 2 266 7.0E-80 T 14-10-2018 AMIS_47330 7ef9dacea959ec8a0aebb2da8c7dcc9c 305 Pfam PF05067 Manganese containing catalase 1 266 7.3E-93 T 14-10-2018 IPR007760 Manganese catalase AMIS_47330 7ef9dacea959ec8a0aebb2da8c7dcc9c 305 SUPERFAMILY SSF47240 1 266 3.44E-88 T 14-10-2018 IPR009078 Ferritin-like superfamily AMIS_71250 4a0064541c3bb73888b3b25a56cf9a7d 156 SUPERFAMILY SSF55811 7 135 7.99E-30 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMIS_71250 4a0064541c3bb73888b3b25a56cf9a7d 156 Pfam PF00293 NUDIX domain 22 139 5.5E-20 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMIS_71250 4a0064541c3bb73888b3b25a56cf9a7d 156 Gene3D G3DSA:3.90.79.10 1 144 9.3E-38 T 14-10-2018 AMIS_52520 af55ad000c4666f820a2a029368cd185 332 SUPERFAMILY SSF52540 3 275 6.45E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_52520 af55ad000c4666f820a2a029368cd185 332 Gene3D G3DSA:3.40.50.300 1 283 4.5E-65 T 14-10-2018 AMIS_52520 af55ad000c4666f820a2a029368cd185 332 Pfam PF13469 Sulfotransferase family 6 213 4.1E-42 T 14-10-2018 AMIS_31030 50caeed3150584e0430ee74acd970d99 112 SUPERFAMILY SSF159894 6 103 9.42E-10 T 14-10-2018 AMIS_31030 50caeed3150584e0430ee74acd970d99 112 Pfam PF04993 TfoX N-terminal domain 18 102 2.5E-12 T 14-10-2018 IPR007076 TfoX, N-terminal AMIS_31030 50caeed3150584e0430ee74acd970d99 112 Pfam PF04237 YjbR 20 100 5.1E-8 T 14-10-2018 IPR007351 Uncharacterised protein YjbR AMIS_56360 b7a5731ef58319e79b1ca234f234a127 188 Pfam PF01381 Helix-turn-helix 13 67 9.8E-17 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMIS_56360 b7a5731ef58319e79b1ca234f234a127 188 SMART SM00530 12 67 8.5E-19 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMIS_56360 b7a5731ef58319e79b1ca234f234a127 188 Gene3D G3DSA:2.60.120.10 93 174 9.9E-14 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMIS_56360 b7a5731ef58319e79b1ca234f234a127 188 SUPERFAMILY SSF51182 65 174 3.28E-21 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily AMIS_56360 b7a5731ef58319e79b1ca234f234a127 188 SUPERFAMILY SSF47413 5 74 8.58E-19 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_56360 b7a5731ef58319e79b1ca234f234a127 188 Gene3D G3DSA:1.10.260.40 2 75 1.2E-18 T 14-10-2018 AMIS_56360 b7a5731ef58319e79b1ca234f234a127 188 Pfam PF07883 Cupin domain 115 174 2.8E-12 T 14-10-2018 IPR013096 Cupin 2, conserved barrel AMIS_23040 2cb23f039f3d7140e10fff41641f8bc9 170 Pfam PF14232 Domain of unknown function (DUF4334) 93 152 7.2E-28 T 14-10-2018 IPR025568 Domain of unknown function DUF4334 AMIS_23040 2cb23f039f3d7140e10fff41641f8bc9 170 Gene3D G3DSA:2.40.128.580 1 154 1.0E-53 T 14-10-2018 AMIS_23040 2cb23f039f3d7140e10fff41641f8bc9 170 Pfam PF14231 GXWXG protein 24 82 1.0E-24 T 14-10-2018 IPR025951 GXWXG domain AMIS_71270 a2d7a02053108d3d7919da29987ddb2f 326 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 322 5.3E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_71270 a2d7a02053108d3d7919da29987ddb2f 326 SUPERFAMILY SSF161098 79 311 2.49E-57 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_71270 a2d7a02053108d3d7919da29987ddb2f 326 Gene3D G3DSA:1.10.3720.10 74 323 1.5E-65 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_8650 50e672939693a6fab2088acd02c97c54 459 Gene3D G3DSA:3.40.120.10 261 378 3.1E-34 T 14-10-2018 AMIS_8650 50e672939693a6fab2088acd02c97c54 459 Gene3D G3DSA:3.40.120.10 4 148 1.2E-41 T 14-10-2018 AMIS_8650 50e672939693a6fab2088acd02c97c54 459 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 383 457 4.0E-15 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMIS_8650 50e672939693a6fab2088acd02c97c54 459 SUPERFAMILY SSF55957 378 458 5.36E-19 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMIS_8650 50e672939693a6fab2088acd02c97c54 459 SUPERFAMILY SSF53738 6 171 4.32E-32 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMIS_8650 50e672939693a6fab2088acd02c97c54 459 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 244 259 9.0E-22 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMIS_8650 50e672939693a6fab2088acd02c97c54 459 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 215 228 9.0E-22 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMIS_8650 50e672939693a6fab2088acd02c97c54 459 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 176 195 9.0E-22 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMIS_8650 50e672939693a6fab2088acd02c97c54 459 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 96 110 9.0E-22 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMIS_8650 50e672939693a6fab2088acd02c97c54 459 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 272 378 9.0E-24 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMIS_8650 50e672939693a6fab2088acd02c97c54 459 Gene3D G3DSA:3.40.120.10 178 260 2.1E-31 T 14-10-2018 AMIS_8650 50e672939693a6fab2088acd02c97c54 459 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 6 125 4.6E-30 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMIS_8650 50e672939693a6fab2088acd02c97c54 459 SUPERFAMILY SSF53738 270 374 4.32E-29 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMIS_8650 50e672939693a6fab2088acd02c97c54 459 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 160 264 8.8E-24 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMIS_8650 50e672939693a6fab2088acd02c97c54 459 Gene3D G3DSA:3.30.310.50 379 459 6.5E-22 T 14-10-2018 AMIS_8650 50e672939693a6fab2088acd02c97c54 459 SUPERFAMILY SSF53738 159 266 8.24E-28 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMIS_47130 8d7312b6a709d4b9333856433a6fc196 308 SUPERFAMILY SSF161098 70 295 1.16E-56 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_47130 8d7312b6a709d4b9333856433a6fc196 308 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 300 4.2E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_47130 8d7312b6a709d4b9333856433a6fc196 308 Gene3D G3DSA:1.10.3720.10 66 307 3.2E-66 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_38340 5c4cf0f6073b4aeb013ca4132647abd9 242 Gene3D G3DSA:2.60.120.200 2 242 2.9E-20 T 14-10-2018 AMIS_38340 5c4cf0f6073b4aeb013ca4132647abd9 242 SUPERFAMILY SSF49899 5 241 1.81E-13 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily AMIS_76500 036f3e642664de09d646bafbebc890fc 161 Pfam PF13690 Chemotaxis phosphatase CheX 46 129 1.9E-15 T 14-10-2018 IPR028051 Chemotaxis phosphatase CheX-like domain AMIS_76500 036f3e642664de09d646bafbebc890fc 161 SUPERFAMILY SSF103039 42 148 8.63E-14 T 14-10-2018 IPR028976 CheC-like superfamily AMIS_76500 036f3e642664de09d646bafbebc890fc 161 Gene3D G3DSA:3.40.1550.10 11 150 1.7E-15 T 14-10-2018 IPR028976 CheC-like superfamily AMIS_18870 0a1522019e5552fa61a0834d8a3f284a 352 Pfam PF11271 Protein of unknown function (DUF3068) 7 310 7.5E-75 T 14-10-2018 IPR021424 Porin PorA AMIS_48260 1cd7be2aab850eab68f1c010725a17d6 465 Gene3D G3DSA:3.40.50.720 259 450 5.5E-12 T 14-10-2018 AMIS_48260 1cd7be2aab850eab68f1c010725a17d6 465 Gene3D G3DSA:3.40.50.720 126 242 1.4E-17 T 14-10-2018 AMIS_48260 1cd7be2aab850eab68f1c010725a17d6 465 Pfam PF00106 short chain dehydrogenase 139 230 3.0E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_48260 1cd7be2aab850eab68f1c010725a17d6 465 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 226 6.4E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_48260 1cd7be2aab850eab68f1c010725a17d6 465 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 156 6.4E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_48260 1cd7be2aab850eab68f1c010725a17d6 465 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 376 395 6.4E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_48260 1cd7be2aab850eab68f1c010725a17d6 465 SUPERFAMILY SSF51735 134 412 6.18E-27 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_11250 a8543b7ff037d1c8129d8a372a5e2cc3 430 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 415 52.82 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 AMIS_11250 a8543b7ff037d1c8129d8a372a5e2cc3 430 Gene3D G3DSA:1.10.8.60 316 420 6.3E-36 T 14-10-2018 AMIS_11250 a8543b7ff037d1c8129d8a372a5e2cc3 430 SUPERFAMILY SSF52540 58 405 2.36E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_11250 a8543b7ff037d1c8129d8a372a5e2cc3 430 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 9 411 2.1E-196 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 AMIS_11250 a8543b7ff037d1c8129d8a372a5e2cc3 430 SUPERFAMILY SSF57716 11 46 1.38E-11 T 14-10-2018 AMIS_11250 a8543b7ff037d1c8129d8a372a5e2cc3 430 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 317 391 4.3E-15 T 14-10-2018 IPR019489 Clp ATPase, C-terminal AMIS_11250 a8543b7ff037d1c8129d8a372a5e2cc3 430 Pfam PF06689 ClpX C4-type zinc finger 12 48 1.7E-20 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 AMIS_11250 a8543b7ff037d1c8129d8a372a5e2cc3 430 SMART SM01086 317 411 1.9E-30 T 14-10-2018 IPR019489 Clp ATPase, C-terminal AMIS_11250 a8543b7ff037d1c8129d8a372a5e2cc3 430 SMART SM00994 10 49 1.1E-23 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 AMIS_11250 a8543b7ff037d1c8129d8a372a5e2cc3 430 Pfam PF07724 AAA domain (Cdc48 subfamily) 114 311 4.7E-50 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMIS_11250 a8543b7ff037d1c8129d8a372a5e2cc3 430 Gene3D G3DSA:3.40.50.300 54 314 2.2E-105 T 14-10-2018 AMIS_11250 a8543b7ff037d1c8129d8a372a5e2cc3 430 SMART SM00382 113 265 1.1E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_11250 a8543b7ff037d1c8129d8a372a5e2cc3 430 Gene3D G3DSA:3.30.50.30 3 50 5.5E-24 T 14-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily AMIS_64390 86c1858ac9daace768918f98f0e8c265 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 14-10-2018 AMIS_64390 86c1858ac9daace768918f98f0e8c265 334 Gene3D G3DSA:1.10.260.40 1 56 8.7E-21 T 14-10-2018 AMIS_64390 86c1858ac9daace768918f98f0e8c265 334 Pfam PF13377 Periplasmic binding protein-like domain 172 332 7.0E-33 T 14-10-2018 AMIS_64390 86c1858ac9daace768918f98f0e8c265 334 Gene3D G3DSA:3.40.50.2300 163 292 1.6E-68 T 14-10-2018 AMIS_64390 86c1858ac9daace768918f98f0e8c265 334 SMART SM00354 2 72 1.4E-27 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_64390 86c1858ac9daace768918f98f0e8c265 334 Gene3D G3DSA:3.40.50.2300 57 309 1.6E-68 T 14-10-2018 AMIS_64390 86c1858ac9daace768918f98f0e8c265 334 SUPERFAMILY SSF47413 3 60 1.93E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_64390 86c1858ac9daace768918f98f0e8c265 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 3.4E-17 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_64390 86c1858ac9daace768918f98f0e8c265 334 SUPERFAMILY SSF53822 62 333 6.48E-65 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_40120 26e0ddc01a96f618e93aa590c85ec564 511 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 487 8.9E-221 T 14-10-2018 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 AMIS_40120 26e0ddc01a96f618e93aa590c85ec564 511 Pfam PF13247 4Fe-4S dicluster domain 173 268 4.0E-36 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMIS_40120 26e0ddc01a96f618e93aa590c85ec564 511 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 355 435 1.7E-26 T 14-10-2018 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 AMIS_40120 26e0ddc01a96f618e93aa590c85ec564 511 Gene3D G3DSA:1.10.3650.10 355 434 1.7E-21 T 14-10-2018 IPR038262 Nitrate reductase beta, C-terminal domain superfamily KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 AMIS_40120 26e0ddc01a96f618e93aa590c85ec564 511 Gene3D G3DSA:3.30.70.20 1 291 4.8E-95 T 14-10-2018 AMIS_40120 26e0ddc01a96f618e93aa590c85ec564 511 SUPERFAMILY SSF54862 1 467 7.74E-148 T 14-10-2018 AMIS_22090 dd1d03e74069152928167eb8186ec761 577 Gene3D G3DSA:3.40.50.300 336 574 1.9E-65 T 14-10-2018 AMIS_22090 dd1d03e74069152928167eb8186ec761 577 Pfam PF00005 ABC transporter 360 499 8.7E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_22090 dd1d03e74069152928167eb8186ec761 577 Pfam PF00664 ABC transporter transmembrane region 32 299 1.5E-25 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AMIS_22090 dd1d03e74069152928167eb8186ec761 577 SUPERFAMILY SSF52540 335 569 2.72E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_22090 dd1d03e74069152928167eb8186ec761 577 SMART SM00382 369 545 3.3E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_22090 dd1d03e74069152928167eb8186ec761 577 SUPERFAMILY SSF90123 18 326 7.19E-53 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMIS_22090 dd1d03e74069152928167eb8186ec761 577 Gene3D G3DSA:1.20.1560.10 9 328 7.5E-53 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMIS_69260 f87dc63a15aa801b8fc860cf0e77a615 196 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 18 188 1.8E-40 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 AMIS_69260 f87dc63a15aa801b8fc860cf0e77a615 196 Gene3D G3DSA:1.20.120.1760 10 134 7.8E-8 T 14-10-2018 AMIS_69260 f87dc63a15aa801b8fc860cf0e77a615 196 Pfam PF01066 CDP-alcohol phosphatidyltransferase 18 88 1.5E-15 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AMIS_69260 f87dc63a15aa801b8fc860cf0e77a615 196 PIRSF PIRSF000847 14 195 1.9E-43 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 AMIS_69260 f87dc63a15aa801b8fc860cf0e77a615 196 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 66 88 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AMIS_18530 3e08cc37db70cfa6fe3f3f171e129a15 378 SUPERFAMILY SSF53098 36 372 2.2E-18 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily AMIS_18530 3e08cc37db70cfa6fe3f3f171e129a15 378 Pfam PF13546 DDE superfamily endonuclease 19 230 2.6E-54 T 14-10-2018 IPR038721 Transposase IS701-like, DDE domain AMIS_6480 3e08cc37db70cfa6fe3f3f171e129a15 378 SUPERFAMILY SSF53098 36 372 2.2E-18 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily AMIS_6480 3e08cc37db70cfa6fe3f3f171e129a15 378 Pfam PF13546 DDE superfamily endonuclease 19 230 2.6E-54 T 14-10-2018 IPR038721 Transposase IS701-like, DDE domain AMIS_45240 3e08cc37db70cfa6fe3f3f171e129a15 378 SUPERFAMILY SSF53098 36 372 2.2E-18 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily AMIS_45240 3e08cc37db70cfa6fe3f3f171e129a15 378 Pfam PF13546 DDE superfamily endonuclease 19 230 2.6E-54 T 14-10-2018 IPR038721 Transposase IS701-like, DDE domain AMIS_45350 3e08cc37db70cfa6fe3f3f171e129a15 378 SUPERFAMILY SSF53098 36 372 2.2E-18 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily AMIS_45350 3e08cc37db70cfa6fe3f3f171e129a15 378 Pfam PF13546 DDE superfamily endonuclease 19 230 2.6E-54 T 14-10-2018 IPR038721 Transposase IS701-like, DDE domain AMIS_37150 5a1fa6e0ef3383c56ff1bbfdca3aaf59 322 Gene3D G3DSA:3.90.1200.10 132 309 3.3E-21 T 14-10-2018 AMIS_37150 5a1fa6e0ef3383c56ff1bbfdca3aaf59 322 SUPERFAMILY SSF56112 37 307 8.6E-37 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMIS_37150 5a1fa6e0ef3383c56ff1bbfdca3aaf59 322 Pfam PF01636 Phosphotransferase enzyme family 65 285 1.8E-13 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase AMIS_62930 d8f7ae65a58b82f4e6fb10707e50e5ee 193 SUPERFAMILY SSF48498 75 185 4.13E-8 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_62930 d8f7ae65a58b82f4e6fb10707e50e5ee 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 52 9.8E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_62930 d8f7ae65a58b82f4e6fb10707e50e5ee 193 Gene3D G3DSA:1.10.357.10 2 187 3.3E-24 T 14-10-2018 AMIS_62930 d8f7ae65a58b82f4e6fb10707e50e5ee 193 SUPERFAMILY SSF46689 4 73 1.54E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_17060 7eb2fdc3f38972c4f738f83145fce892 465 Pfam PF00990 Diguanylate cyclase, GGDEF domain 305 459 2.1E-43 T 14-10-2018 IPR000160 GGDEF domain AMIS_17060 7eb2fdc3f38972c4f738f83145fce892 465 SUPERFAMILY SSF55073 310 462 1.18E-46 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_17060 7eb2fdc3f38972c4f738f83145fce892 465 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 304 462 8.1E-48 T 14-10-2018 IPR000160 GGDEF domain AMIS_17060 7eb2fdc3f38972c4f738f83145fce892 465 Gene3D G3DSA:3.30.70.270 298 463 6.5E-56 T 14-10-2018 AMIS_17060 7eb2fdc3f38972c4f738f83145fce892 465 SMART SM00267 294 463 2.8E-58 T 14-10-2018 IPR000160 GGDEF domain AMIS_36340 3547fc6b9eac43a06a199fb813e4893b 170 Gene3D G3DSA:1.10.10.10 83 159 1.0E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_36340 3547fc6b9eac43a06a199fb813e4893b 170 SUPERFAMILY SSF88659 99 155 2.62E-14 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_36340 3547fc6b9eac43a06a199fb813e4893b 170 Gene3D G3DSA:1.10.1740.10 1 82 8.4E-7 T 14-10-2018 AMIS_36340 3547fc6b9eac43a06a199fb813e4893b 170 Pfam PF04542 Sigma-70 region 2 8 72 1.6E-7 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_36340 3547fc6b9eac43a06a199fb813e4893b 170 Pfam PF08281 Sigma-70, region 4 101 152 2.1E-14 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_36340 3547fc6b9eac43a06a199fb813e4893b 170 SUPERFAMILY SSF88946 3 92 3.14E-12 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_36340 3547fc6b9eac43a06a199fb813e4893b 170 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 3 154 4.8E-19 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_45180 b4498b5b51f4563b35de04d179c65ff5 95 Gene3D G3DSA:3.30.70.100 4 90 1.3E-5 T 14-10-2018 AMIS_45180 b4498b5b51f4563b35de04d179c65ff5 95 Pfam PF03992 Antibiotic biosynthesis monooxygenase 9 64 4.3E-5 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain AMIS_45180 b4498b5b51f4563b35de04d179c65ff5 95 SUPERFAMILY SSF54909 4 68 2.59E-8 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel AMIS_25800 4b45bcf8db0aa04eba90654499be785c 280 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 197 9.4E-4 T 14-10-2018 AMIS_25800 4b45bcf8db0aa04eba90654499be785c 280 Gene3D G3DSA:3.40.50.720 2 280 8.3E-79 T 14-10-2018 AMIS_25800 4b45bcf8db0aa04eba90654499be785c 280 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 4.3E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_25800 4b45bcf8db0aa04eba90654499be785c 280 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 4.3E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_25800 4b45bcf8db0aa04eba90654499be785c 280 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 4.3E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_25800 4b45bcf8db0aa04eba90654499be785c 280 Pfam PF00106 short chain dehydrogenase 5 191 2.8E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_25800 4b45bcf8db0aa04eba90654499be785c 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 6.8E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_25800 4b45bcf8db0aa04eba90654499be785c 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 6.8E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_25800 4b45bcf8db0aa04eba90654499be785c 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 6.8E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_25800 4b45bcf8db0aa04eba90654499be785c 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 6.8E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_25800 4b45bcf8db0aa04eba90654499be785c 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 6.8E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_25800 4b45bcf8db0aa04eba90654499be785c 280 SUPERFAMILY SSF51735 4 239 1.33E-61 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_35290 74c16b4ec6f0582c5eececdfa001b3ad 405 Pfam PF08281 Sigma-70, region 4 102 153 1.1E-9 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_35290 74c16b4ec6f0582c5eececdfa001b3ad 405 Gene3D G3DSA:1.10.10.10 106 158 2.2E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_35290 74c16b4ec6f0582c5eececdfa001b3ad 405 Gene3D G3DSA:1.10.1740.10 7 97 4.8E-5 T 14-10-2018 AMIS_35290 74c16b4ec6f0582c5eececdfa001b3ad 405 SUPERFAMILY SSF88659 96 155 8.07E-11 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_35290 74c16b4ec6f0582c5eececdfa001b3ad 405 SUPERFAMILY SSF88946 10 93 1.26E-10 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_35290 74c16b4ec6f0582c5eececdfa001b3ad 405 Pfam PF04542 Sigma-70 region 2 10 76 4.6E-7 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_71610 3ad6f6186528f2367073788b944be9dc 634 Pfam PF00905 Penicillin binding protein transpeptidase domain 357 629 2.5E-41 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AMIS_71610 3ad6f6186528f2367073788b944be9dc 634 SUPERFAMILY SSF56601 285 632 3.69E-64 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMIS_71610 3ad6f6186528f2367073788b944be9dc 634 Pfam PF05223 NTF2-like N-terminal transpeptidase domain 27 140 7.2E-8 T 14-10-2018 IPR007887 NTF2-like N-terminal transpeptidase GO:0046677 AMIS_71610 3ad6f6186528f2367073788b944be9dc 634 SUPERFAMILY SSF56519 142 335 9.03E-20 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 AMIS_71610 3ad6f6186528f2367073788b944be9dc 634 Pfam PF03717 Penicillin-binding Protein dimerisation domain 149 308 1.2E-12 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AMIS_71610 3ad6f6186528f2367073788b944be9dc 634 Gene3D G3DSA:3.90.1310.30 140 334 6.0E-15 T 14-10-2018 AMIS_71610 3ad6f6186528f2367073788b944be9dc 634 Gene3D G3DSA:3.40.710.10 335 632 2.1E-66 T 14-10-2018 AMIS_56890 13a8154359144fc17a45e7989daf37eb 269 Gene3D G3DSA:1.10.10.10 4 85 1.8E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_56890 13a8154359144fc17a45e7989daf37eb 269 PIRSF PIRSF020623 1 267 9.4E-51 T 14-10-2018 IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX GO:0006351 AMIS_56890 13a8154359144fc17a45e7989daf37eb 269 SUPERFAMILY SSF46785 28 81 8.09E-7 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_56890 13a8154359144fc17a45e7989daf37eb 269 Gene3D G3DSA:3.30.70.2650 89 171 2.7E-6 T 14-10-2018 AMIS_56890 13a8154359144fc17a45e7989daf37eb 269 Pfam PF08223 PaaX-like protein C-terminal domain 170 254 1.7E-10 T 14-10-2018 IPR013225 PaaX-like, C-terminal AMIS_56890 13a8154359144fc17a45e7989daf37eb 269 Pfam PF07848 PaaX-like protein 6 72 3.6E-12 T 14-10-2018 IPR012906 PaaX-like, N-terminal AMIS_56890 13a8154359144fc17a45e7989daf37eb 269 Gene3D G3DSA:1.20.58.1460 176 260 3.1E-5 T 14-10-2018 AMIS_16470 13c9e33d05a11f89f71e6e1c92461a5b 192 Gene3D G3DSA:1.10.357.10 2 192 1.2E-55 T 14-10-2018 AMIS_16470 13c9e33d05a11f89f71e6e1c92461a5b 192 SUPERFAMILY SSF46689 3 74 8.21E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_16470 13c9e33d05a11f89f71e6e1c92461a5b 192 SUPERFAMILY SSF48498 83 191 2.29E-11 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_16470 13c9e33d05a11f89f71e6e1c92461a5b 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 2.8E-16 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_16470 13c9e33d05a11f89f71e6e1c92461a5b 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 1.3E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_16470 13c9e33d05a11f89f71e6e1c92461a5b 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 1.3E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_23760 6d8754e0a2bbad8729a86982338b3acc 549 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 10 542 4.3E-90 T 14-10-2018 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 AMIS_23760 6d8754e0a2bbad8729a86982338b3acc 549 Pfam PF00999 Sodium/hydrogen exchanger family 14 414 2.0E-50 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AMIS_78780 274a16dbe82aad9a1a13fbfc6968fc41 142 Gene3D G3DSA:3.10.180.10 4 142 2.9E-27 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_78780 274a16dbe82aad9a1a13fbfc6968fc41 142 SUPERFAMILY SSF54593 6 141 8.74E-14 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_13480 d535189246bb05586d699ecda4ca78a4 276 Pfam PF02548 Ketopantoate hydroxymethyltransferase 15 271 1.1E-105 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AMIS_13480 d535189246bb05586d699ecda4ca78a4 276 PIRSF PIRSF000388 10 276 2.0E-108 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AMIS_13480 d535189246bb05586d699ecda4ca78a4 276 SUPERFAMILY SSF51621 15 275 1.61E-99 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AMIS_13480 d535189246bb05586d699ecda4ca78a4 276 Gene3D G3DSA:3.20.20.60 13 276 7.2E-107 T 14-10-2018 AMIS_13480 d535189246bb05586d699ecda4ca78a4 276 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 19 276 1.2E-86 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AMIS_13480 d535189246bb05586d699ecda4ca78a4 276 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 16 276 40.896 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AMIS_56300 c589da0d30018f21534db900ad06689f 410 Gene3D G3DSA:2.40.110.10 124 238 6.3E-32 T 14-10-2018 AMIS_56300 c589da0d30018f21534db900ad06689f 410 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 8 114 7.5E-15 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMIS_56300 c589da0d30018f21534db900ad06689f 410 Gene3D G3DSA:1.10.540.10 1 116 1.6E-19 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMIS_56300 c589da0d30018f21534db900ad06689f 410 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 260 404 4.4E-51 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMIS_56300 c589da0d30018f21534db900ad06689f 410 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 125 222 8.3E-22 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMIS_56300 c589da0d30018f21534db900ad06689f 410 Gene3D G3DSA:1.20.140.10 256 409 1.7E-54 T 14-10-2018 AMIS_56300 c589da0d30018f21534db900ad06689f 410 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 363 382 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AMIS_56300 c589da0d30018f21534db900ad06689f 410 SUPERFAMILY SSF47203 260 406 1.22E-53 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMIS_56300 c589da0d30018f21534db900ad06689f 410 SUPERFAMILY SSF56645 5 232 5.24E-53 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMIS_810 675cab8676a50fef9e160ae927be5d22 550 Pfam PF01926 50S ribosome-binding GTPase 59 175 1.7E-5 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 AMIS_810 675cab8676a50fef9e160ae927be5d22 550 SUPERFAMILY SSF52540 51 253 7.4E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_48850 82daa32362e45be8377222458b2be22c 184 Gene3D G3DSA:3.40.50.850 5 181 2.8E-41 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AMIS_48850 82daa32362e45be8377222458b2be22c 184 Pfam PF00857 Isochorismatase family 10 142 3.5E-33 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 AMIS_48850 82daa32362e45be8377222458b2be22c 184 SUPERFAMILY SSF52499 4 142 1.57E-43 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AMIS_32500 adbb8d2edbb808d5aef1224e839769f5 488 SUPERFAMILY SSF51445 54 347 1.89E-105 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_32500 adbb8d2edbb808d5aef1224e839769f5 488 SMART SM00633 94 345 1.0E-126 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 AMIS_32500 adbb8d2edbb808d5aef1224e839769f5 488 PRINTS PR00134 Glycosyl hydrolase family 10 signature 240 252 4.4E-16 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 AMIS_32500 adbb8d2edbb808d5aef1224e839769f5 488 PRINTS PR00134 Glycosyl hydrolase family 10 signature 210 221 4.4E-16 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 AMIS_32500 adbb8d2edbb808d5aef1224e839769f5 488 PRINTS PR00134 Glycosyl hydrolase family 10 signature 125 137 4.4E-16 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 AMIS_32500 adbb8d2edbb808d5aef1224e839769f5 488 PRINTS PR00134 Glycosyl hydrolase family 10 signature 167 178 4.4E-16 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 AMIS_32500 adbb8d2edbb808d5aef1224e839769f5 488 Pfam PF00652 Ricin-type beta-trefoil lectin domain 366 485 4.1E-28 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_32500 adbb8d2edbb808d5aef1224e839769f5 488 SUPERFAMILY SSF50370 362 486 1.86E-39 T 14-10-2018 IPR035992 Ricin B-like lectins AMIS_32500 adbb8d2edbb808d5aef1224e839769f5 488 SMART SM00458 364 488 8.2E-34 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_32500 adbb8d2edbb808d5aef1224e839769f5 488 Gene3D G3DSA:2.80.10.50 365 458 9.4E-30 T 14-10-2018 AMIS_32500 adbb8d2edbb808d5aef1224e839769f5 488 Gene3D G3DSA:2.80.10.50 459 488 7.9E-8 T 14-10-2018 AMIS_32500 adbb8d2edbb808d5aef1224e839769f5 488 Pfam PF00331 Glycosyl hydrolase family 10 53 343 1.5E-103 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 AMIS_32500 adbb8d2edbb808d5aef1224e839769f5 488 Gene3D G3DSA:3.20.20.80 48 352 1.3E-114 T 14-10-2018 AMIS_46420 a0ab4f4e92dcc397c25348d52db494b2 308 SMART SM00382 33 216 5.7E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_46420 a0ab4f4e92dcc397c25348d52db494b2 308 Gene3D G3DSA:3.40.50.300 1 231 6.8E-63 T 14-10-2018 AMIS_46420 a0ab4f4e92dcc397c25348d52db494b2 308 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_46420 a0ab4f4e92dcc397c25348d52db494b2 308 Pfam PF00005 ABC transporter 26 162 2.5E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_46420 a0ab4f4e92dcc397c25348d52db494b2 308 SUPERFAMILY SSF52540 4 232 2.77E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_74190 a21dd714811481974d0a369c91d58b0e 845 Gene3D G3DSA:3.90.740.10 202 374 1.3E-187 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AMIS_74190 a21dd714811481974d0a369c91d58b0e 845 Pfam PF08264 Anticodon-binding domain of tRNA 656 799 2.7E-26 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 AMIS_74190 a21dd714811481974d0a369c91d58b0e 845 SUPERFAMILY SSF47323 630 836 1.1E-37 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMIS_74190 a21dd714811481974d0a369c91d58b0e 845 PRINTS PR00986 Valyl-tRNA synthetase signature 46 57 9.5E-14 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AMIS_74190 a21dd714811481974d0a369c91d58b0e 845 PRINTS PR00986 Valyl-tRNA synthetase signature 378 391 9.5E-14 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AMIS_74190 a21dd714811481974d0a369c91d58b0e 845 PRINTS PR00986 Valyl-tRNA synthetase signature 529 547 9.5E-14 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AMIS_74190 a21dd714811481974d0a369c91d58b0e 845 PRINTS PR00986 Valyl-tRNA synthetase signature 498 519 9.5E-14 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AMIS_74190 a21dd714811481974d0a369c91d58b0e 845 PRINTS PR00986 Valyl-tRNA synthetase signature 255 272 9.5E-14 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AMIS_74190 a21dd714811481974d0a369c91d58b0e 845 SUPERFAMILY SSF50677 219 363 7.59E-27 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AMIS_74190 a21dd714811481974d0a369c91d58b0e 845 Gene3D G3DSA:3.40.50.620 31 578 1.3E-187 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMIS_74190 a21dd714811481974d0a369c91d58b0e 845 SUPERFAMILY SSF52374 10 621 7.44E-102 T 14-10-2018 AMIS_74190 a21dd714811481974d0a369c91d58b0e 845 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 53 64 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMIS_74190 a21dd714811481974d0a369c91d58b0e 845 Hamap MF_02005 Valine--tRNA ligase [valS]. 11 831 26.677 T 14-10-2018 IPR022874 Valine-tRNA ligase, type 2 GO:0004832 KEGG: 00970+6.1.1.9 AMIS_74190 a21dd714811481974d0a369c91d58b0e 845 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 24 616 1.1E-85 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMIS_74190 a21dd714811481974d0a369c91d58b0e 845 Gene3D G3DSA:1.10.730.10 20 787 1.3E-187 T 14-10-2018 AMIS_35670 ad396b7b3b0987469cc31b429b627f37 784 ProSitePatterns PS00455 Putative AMP-binding domain signature. 448 459 - T 14-10-2018 IPR020845 AMP-binding, conserved site AMIS_35670 ad396b7b3b0987469cc31b429b627f37 784 Gene3D G3DSA:3.40.50.720 22 279 1.5E-54 T 14-10-2018 AMIS_35670 ad396b7b3b0987469cc31b429b627f37 784 Gene3D G3DSA:3.30.300.30 689 783 3.7E-21 T 14-10-2018 AMIS_35670 ad396b7b3b0987469cc31b429b627f37 784 SUPERFAMILY SSF51735 28 262 8.26E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_35670 ad396b7b3b0987469cc31b429b627f37 784 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 106 117 1.5E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_35670 ad396b7b3b0987469cc31b429b627f37 784 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 32 49 1.5E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_35670 ad396b7b3b0987469cc31b429b627f37 784 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 172 1.5E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_35670 ad396b7b3b0987469cc31b429b627f37 784 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 201 1.5E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_35670 ad396b7b3b0987469cc31b429b627f37 784 SUPERFAMILY SSF56801 317 781 1.83E-92 T 14-10-2018 AMIS_35670 ad396b7b3b0987469cc31b429b627f37 784 Pfam PF00106 short chain dehydrogenase 32 223 6.4E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_35670 ad396b7b3b0987469cc31b429b627f37 784 Gene3D G3DSA:3.40.50.12780 304 685 6.8E-58 T 14-10-2018 AMIS_35670 ad396b7b3b0987469cc31b429b627f37 784 Pfam PF13193 AMP-binding enzyme C-terminal domain 706 778 3.6E-11 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AMIS_35670 ad396b7b3b0987469cc31b429b627f37 784 Pfam PF00501 AMP-binding enzyme 320 694 8.7E-39 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMIS_2550 948b004b0192e0f58de8cb8b4c79a75a 430 Gene3D G3DSA:3.40.50.300 12 223 6.5E-27 T 14-10-2018 AMIS_2550 948b004b0192e0f58de8cb8b4c79a75a 430 Gene3D G3DSA:3.30.420.280 225 421 3.4E-28 T 14-10-2018 AMIS_2550 948b004b0192e0f58de8cb8b4c79a75a 430 Pfam PF03237 Terminase-like family 91 233 4.2E-7 T 14-10-2018 IPR004921 Terminase large subunit, T4likevirus-type AMIS_63400 6ce2a5715120089b12540a24b352f77e 165 SUPERFAMILY SSF88659 98 156 4.49E-15 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_63400 6ce2a5715120089b12540a24b352f77e 165 Gene3D G3DSA:1.10.1740.10 1 74 2.2E-11 T 14-10-2018 AMIS_63400 6ce2a5715120089b12540a24b352f77e 165 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 7 152 8.6E-18 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_63400 6ce2a5715120089b12540a24b352f77e 165 Gene3D G3DSA:1.10.10.10 75 161 2.1E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_63400 6ce2a5715120089b12540a24b352f77e 165 Pfam PF08281 Sigma-70, region 4 99 152 8.8E-15 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_63400 6ce2a5715120089b12540a24b352f77e 165 TIGRFAM TIGR02983 SigE-fam_strep: RNA polymerase sigma-70 factor, sigma-E family 3 156 5.3E-43 T 14-10-2018 IPR014325 RNA polymerase sigma-E factor, actinobacteria GO:0016987 AMIS_63400 6ce2a5715120089b12540a24b352f77e 165 Pfam PF04542 Sigma-70 region 2 11 77 7.8E-11 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_63400 6ce2a5715120089b12540a24b352f77e 165 SUPERFAMILY SSF88946 2 88 2.2E-16 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_33870 e335ea346e62de4fc9fce29ff182bd7c 371 Pfam PF00512 His Kinase A (phospho-acceptor) domain 308 370 7.8E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_33870 e335ea346e62de4fc9fce29ff182bd7c 371 Gene3D G3DSA:3.30.450.20 150 276 1.6E-8 T 14-10-2018 AMIS_33870 e335ea346e62de4fc9fce29ff182bd7c 371 SMART SM00388 307 371 2.3E-6 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_33870 e335ea346e62de4fc9fce29ff182bd7c 371 Pfam PF13492 GAF domain 13 134 4.2E-8 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_33870 e335ea346e62de4fc9fce29ff182bd7c 371 SUPERFAMILY SSF55785 150 278 1.94E-5 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_33870 e335ea346e62de4fc9fce29ff182bd7c 371 SUPERFAMILY SSF47384 294 369 3.92E-10 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_33870 e335ea346e62de4fc9fce29ff182bd7c 371 Gene3D G3DSA:1.10.287.130 277 369 6.1E-11 T 14-10-2018 AMIS_33870 e335ea346e62de4fc9fce29ff182bd7c 371 SMART SM00065 5 147 0.0095 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_33870 e335ea346e62de4fc9fce29ff182bd7c 371 Gene3D G3DSA:3.30.450.40 6 149 1.7E-16 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_33870 e335ea346e62de4fc9fce29ff182bd7c 371 SUPERFAMILY SSF55781 9 144 1.5E-20 T 14-10-2018 AMIS_70720 ed2e8d96e5a0a98fc41cc44fc3e09d85 187 Pfam PF03602 Conserved hypothetical protein 95 2 183 8.1E-48 T 14-10-2018 AMIS_70720 ed2e8d96e5a0a98fc41cc44fc3e09d85 187 PIRSF PIRSF004553 1 187 1.1E-51 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 AMIS_70720 ed2e8d96e5a0a98fc41cc44fc3e09d85 187 Gene3D G3DSA:3.40.50.150 1 187 1.2E-54 T 14-10-2018 AMIS_70720 ed2e8d96e5a0a98fc41cc44fc3e09d85 187 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 119 125 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AMIS_70720 ed2e8d96e5a0a98fc41cc44fc3e09d85 187 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 2 184 1.8E-44 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 AMIS_70720 ed2e8d96e5a0a98fc41cc44fc3e09d85 187 SUPERFAMILY SSF53335 2 184 5.09E-43 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_40260 e4c8337dec889420d7dd64d977e304d1 224 SMART SM00345 13 72 4.0E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_40260 e4c8337dec889420d7dd64d977e304d1 224 SUPERFAMILY SSF46785 2 76 3.61E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_40260 e4c8337dec889420d7dd64d977e304d1 224 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 7.7E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_40260 e4c8337dec889420d7dd64d977e304d1 224 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 7.7E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_40260 e4c8337dec889420d7dd64d977e304d1 224 SMART SM00895 92 216 9.1E-21 T 14-10-2018 IPR011711 GntR, C-terminal AMIS_40260 e4c8337dec889420d7dd64d977e304d1 224 Gene3D G3DSA:1.20.120.530 86 224 1.5E-26 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AMIS_40260 e4c8337dec889420d7dd64d977e304d1 224 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 71 6.1E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_40260 e4c8337dec889420d7dd64d977e304d1 224 SUPERFAMILY SSF48008 89 222 7.06E-25 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AMIS_40260 e4c8337dec889420d7dd64d977e304d1 224 Pfam PF07729 FCD domain 93 214 4.1E-21 T 14-10-2018 IPR011711 GntR, C-terminal AMIS_40260 e4c8337dec889420d7dd64d977e304d1 224 Gene3D G3DSA:1.10.10.10 1 72 2.2E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_5990 d5fc611b31cb0a2f2ac88a6824bacf6e 157 Gene3D G3DSA:1.10.455.10 2 157 1.1E-54 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily AMIS_5990 d5fc611b31cb0a2f2ac88a6824bacf6e 157 Pfam PF00177 Ribosomal protein S7p/S5e 1 150 7.3E-57 T 14-10-2018 IPR023798 Ribosomal protein S7 domain AMIS_5990 d5fc611b31cb0a2f2ac88a6824bacf6e 157 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 157 1.3E-61 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 AMIS_5990 d5fc611b31cb0a2f2ac88a6824bacf6e 157 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 157 34.206 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 AMIS_5990 d5fc611b31cb0a2f2ac88a6824bacf6e 157 SUPERFAMILY SSF47973 1 150 1.83E-54 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily AMIS_5990 d5fc611b31cb0a2f2ac88a6824bacf6e 157 PIRSF PIRSF002122 6 157 1.1E-50 T 14-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 AMIS_5990 d5fc611b31cb0a2f2ac88a6824bacf6e 157 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 14-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_47760 ed2b2982e1f8712581a3131d7534fca2 1001 SUPERFAMILY SSF141868 745 989 9.02E-86 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_47760 ed2b2982e1f8712581a3131d7534fca2 1001 Gene3D G3DSA:3.30.450.20 429 560 1.9E-16 T 14-10-2018 AMIS_47760 ed2b2982e1f8712581a3131d7534fca2 1001 SMART SM00091 441 505 1.0E-8 T 14-10-2018 IPR000014 PAS domain AMIS_47760 ed2b2982e1f8712581a3131d7534fca2 1001 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 559 723 4.7E-37 T 14-10-2018 IPR000160 GGDEF domain AMIS_47760 ed2b2982e1f8712581a3131d7534fca2 1001 Gene3D G3DSA:3.20.20.450 742 993 5.4E-96 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_47760 ed2b2982e1f8712581a3131d7534fca2 1001 SUPERFAMILY SSF55785 433 550 4.83E-12 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_47760 ed2b2982e1f8712581a3131d7534fca2 1001 SMART SM00267 552 728 5.6E-52 T 14-10-2018 IPR000160 GGDEF domain AMIS_47760 ed2b2982e1f8712581a3131d7534fca2 1001 Pfam PF08448 PAS fold 450 554 4.4E-9 T 14-10-2018 IPR013656 PAS fold-4 AMIS_47760 ed2b2982e1f8712581a3131d7534fca2 1001 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 437 558 1.6E-10 T 14-10-2018 IPR000014 PAS domain AMIS_47760 ed2b2982e1f8712581a3131d7534fca2 1001 Pfam PF00990 Diguanylate cyclase, GGDEF domain 563 721 1.5E-40 T 14-10-2018 IPR000160 GGDEF domain AMIS_47760 ed2b2982e1f8712581a3131d7534fca2 1001 SUPERFAMILY SSF55073 568 730 1.26E-40 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_47760 ed2b2982e1f8712581a3131d7534fca2 1001 Pfam PF00563 EAL domain 745 981 1.7E-72 T 14-10-2018 IPR001633 EAL domain AMIS_47760 ed2b2982e1f8712581a3131d7534fca2 1001 SMART SM00052 738 986 1.1E-109 T 14-10-2018 IPR001633 EAL domain AMIS_47760 ed2b2982e1f8712581a3131d7534fca2 1001 Gene3D G3DSA:3.30.70.270 561 741 1.4E-50 T 14-10-2018 AMIS_3980 0482f8d6ef23171bc5070d3d35ddb0ef 431 Gene3D G3DSA:3.40.50.300 4 222 3.0E-63 T 14-10-2018 AMIS_3980 0482f8d6ef23171bc5070d3d35ddb0ef 431 Gene3D G3DSA:2.40.50.940 223 292 2.1E-18 T 14-10-2018 AMIS_3980 0482f8d6ef23171bc5070d3d35ddb0ef 431 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_3980 0482f8d6ef23171bc5070d3d35ddb0ef 431 SUPERFAMILY SSF50331 237 426 6.12E-14 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal AMIS_3980 0482f8d6ef23171bc5070d3d35ddb0ef 431 SUPERFAMILY SSF52540 4 244 6.86E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_3980 0482f8d6ef23171bc5070d3d35ddb0ef 431 SMART SM00382 29 212 4.1E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_3980 0482f8d6ef23171bc5070d3d35ddb0ef 431 Gene3D G3DSA:2.40.50.140 293 335 2.1E-18 T 14-10-2018 AMIS_3980 0482f8d6ef23171bc5070d3d35ddb0ef 431 Pfam PF00005 ABC transporter 21 162 3.8E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_52360 79d1812e4d401f44042aa3a3da3bc9f3 433 Pfam PF13437 HlyD family secretion protein 258 351 8.9E-9 T 14-10-2018 AMIS_52360 79d1812e4d401f44042aa3a3da3bc9f3 433 Gene3D G3DSA:2.40.420.20 365 431 1.9E-12 T 14-10-2018 AMIS_52360 79d1812e4d401f44042aa3a3da3bc9f3 433 SUPERFAMILY SSF111369 46 140 8.76E-6 T 14-10-2018 AMIS_52360 79d1812e4d401f44042aa3a3da3bc9f3 433 Pfam PF13533 Biotin-lipoyl like 59 101 1.1E-9 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AMIS_52360 79d1812e4d401f44042aa3a3da3bc9f3 433 Gene3D G3DSA:2.40.30.170 251 364 1.3E-13 T 14-10-2018 AMIS_53250 04ea3ae33a284cd6c6a1f5ef920c555b 515 ProSitePatterns PS00455 Putative AMP-binding domain signature. 174 185 - T 14-10-2018 IPR020845 AMP-binding, conserved site AMIS_53250 04ea3ae33a284cd6c6a1f5ef920c555b 515 SUPERFAMILY SSF56801 7 515 5.36E-156 T 14-10-2018 AMIS_53250 04ea3ae33a284cd6c6a1f5ef920c555b 515 Gene3D G3DSA:3.40.50.12780 1 417 2.3E-120 T 14-10-2018 AMIS_53250 04ea3ae33a284cd6c6a1f5ef920c555b 515 Gene3D G3DSA:3.30.300.310 420 515 2.2E-32 T 14-10-2018 AMIS_53250 04ea3ae33a284cd6c6a1f5ef920c555b 515 Pfam PF13193 AMP-binding enzyme C-terminal domain 433 508 3.0E-21 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AMIS_53250 04ea3ae33a284cd6c6a1f5ef920c555b 515 Pfam PF00501 AMP-binding enzyme 8 424 9.8E-108 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMIS_38010 0b4015fa01349862cd3f816230471eaf 621 Pfam PF00501 AMP-binding enzyme 60 499 3.6E-86 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMIS_38010 0b4015fa01349862cd3f816230471eaf 621 Pfam PF13193 AMP-binding enzyme C-terminal domain 509 583 3.5E-23 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AMIS_38010 0b4015fa01349862cd3f816230471eaf 621 ProSitePatterns PS00455 Putative AMP-binding domain signature. 235 246 - T 14-10-2018 IPR020845 AMP-binding, conserved site AMIS_38010 0b4015fa01349862cd3f816230471eaf 621 SUPERFAMILY SSF56801 3 617 3.92E-160 T 14-10-2018 AMIS_38010 0b4015fa01349862cd3f816230471eaf 621 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 4 58 1.6E-20 T 14-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 AMIS_38010 0b4015fa01349862cd3f816230471eaf 621 Gene3D G3DSA:3.30.300.30 495 618 4.7E-23 T 14-10-2018 AMIS_38010 0b4015fa01349862cd3f816230471eaf 621 Gene3D G3DSA:3.40.50.12780 33 492 4.5E-108 T 14-10-2018 AMIS_21880 7fd02ada90a220b9b9b6f977b58e4259 449 SUPERFAMILY SSF52266 210 439 2.9E-51 T 14-10-2018 AMIS_21880 7fd02ada90a220b9b9b6f977b58e4259 449 Gene3D G3DSA:3.40.50.1110 195 438 2.4E-35 T 14-10-2018 IPR036514 SGNH hydrolase superfamily AMIS_21880 7fd02ada90a220b9b9b6f977b58e4259 449 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 220 429 2.2E-26 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain AMIS_65160 ecba9774fc7dd91d3dadee69ce05a926 486 Gene3D G3DSA:3.40.50.300 234 474 5.7E-49 T 14-10-2018 AMIS_65160 ecba9774fc7dd91d3dadee69ce05a926 486 Gene3D G3DSA:3.40.50.300 1 224 2.5E-41 T 14-10-2018 AMIS_65160 ecba9774fc7dd91d3dadee69ce05a926 486 SUPERFAMILY SSF52540 2 226 1.58E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_65160 ecba9774fc7dd91d3dadee69ce05a926 486 PIRSF PIRSF039117 1 481 8.9E-112 T 14-10-2018 IPR030665 Circadian clock protein kinase KaiC KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 AMIS_65160 ecba9774fc7dd91d3dadee69ce05a926 486 SUPERFAMILY SSF52540 239 464 5.14E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_65160 ecba9774fc7dd91d3dadee69ce05a926 486 Pfam PF06745 KaiC 240 458 6.2E-38 T 14-10-2018 IPR014774 KaiC-like domain AMIS_65160 ecba9774fc7dd91d3dadee69ce05a926 486 Pfam PF06745 KaiC 5 224 4.9E-25 T 14-10-2018 IPR014774 KaiC-like domain AMIS_27840 bee3ed0c047dd3aa1cd013ee72e72327 534 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 406 435 2.9E-19 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_27840 bee3ed0c047dd3aa1cd013ee72e72327 534 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 377 404 2.9E-19 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_27840 bee3ed0c047dd3aa1cd013ee72e72327 534 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 300 329 2.9E-19 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_27840 bee3ed0c047dd3aa1cd013ee72e72327 534 SMART SM00283 293 533 6.4E-46 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_27840 bee3ed0c047dd3aa1cd013ee72e72327 534 SUPERFAMILY SSF58104 244 532 5.23E-59 T 14-10-2018 AMIS_27840 bee3ed0c047dd3aa1cd013ee72e72327 534 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 339 506 1.7E-33 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_27840 bee3ed0c047dd3aa1cd013ee72e72327 534 SMART SM00304 218 271 2.8E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_27840 bee3ed0c047dd3aa1cd013ee72e72327 534 Pfam PF00672 HAMP domain 218 267 9.3E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_27840 bee3ed0c047dd3aa1cd013ee72e72327 534 Gene3D G3DSA:1.10.287.950 218 534 5.5E-64 T 14-10-2018 AMIS_27840 bee3ed0c047dd3aa1cd013ee72e72327 534 Pfam PF12729 Four helix bundle sensory module for signal transduction 13 190 3.8E-14 T 14-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain AMIS_66170 52f8935ef1aebdb2a85170d1f101b3cb 224 SMART SM00448 2 134 1.4E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_66170 52f8935ef1aebdb2a85170d1f101b3cb 224 SMART SM00421 161 218 5.9E-25 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_66170 52f8935ef1aebdb2a85170d1f101b3cb 224 SUPERFAMILY SSF46894 153 224 1.84E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_66170 52f8935ef1aebdb2a85170d1f101b3cb 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 194 206 1.6E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_66170 52f8935ef1aebdb2a85170d1f101b3cb 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 194 1.6E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_66170 52f8935ef1aebdb2a85170d1f101b3cb 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 178 1.6E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_66170 52f8935ef1aebdb2a85170d1f101b3cb 224 Gene3D G3DSA:3.40.50.12740 2 224 5.8E-69 T 14-10-2018 AMIS_66170 52f8935ef1aebdb2a85170d1f101b3cb 224 Pfam PF00196 Bacterial regulatory proteins, luxR family 163 217 3.3E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_66170 52f8935ef1aebdb2a85170d1f101b3cb 224 SUPERFAMILY SSF52172 2 146 1.99E-31 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_66170 52f8935ef1aebdb2a85170d1f101b3cb 224 ProSitePatterns PS00622 LuxR-type HTH domain signature. 178 205 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_66170 52f8935ef1aebdb2a85170d1f101b3cb 224 Pfam PF00072 Response regulator receiver domain 94 134 1.6E-5 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_66170 52f8935ef1aebdb2a85170d1f101b3cb 224 Pfam PF00072 Response regulator receiver domain 4 71 3.0E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_38990 eb0eb8e71f9bccba6e0128d2a054a5ce 660 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 215 224 - T 14-10-2018 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 AMIS_38990 eb0eb8e71f9bccba6e0128d2a054a5ce 660 Pfam PF00553 Cellulose binding domain 566 659 1.0E-22 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 AMIS_38990 eb0eb8e71f9bccba6e0128d2a054a5ce 660 SUPERFAMILY SSF49384 562 658 3.56E-23 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 AMIS_38990 eb0eb8e71f9bccba6e0128d2a054a5ce 660 Gene3D G3DSA:2.60.40.10 468 555 1.1E-22 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_38990 eb0eb8e71f9bccba6e0128d2a054a5ce 660 SUPERFAMILY SSF49265 468 557 7.79E-15 T 14-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 AMIS_38990 eb0eb8e71f9bccba6e0128d2a054a5ce 660 SMART SM00637 566 657 2.6E-31 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 AMIS_38990 eb0eb8e71f9bccba6e0128d2a054a5ce 660 SUPERFAMILY SSF51445 57 434 3.64E-77 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_38990 eb0eb8e71f9bccba6e0128d2a054a5ce 660 Gene3D G3DSA:2.60.40.290 564 660 1.4E-23 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 AMIS_38990 eb0eb8e71f9bccba6e0128d2a054a5ce 660 SMART SM00060 471 544 2.0E-9 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 AMIS_38990 eb0eb8e71f9bccba6e0128d2a054a5ce 660 Gene3D G3DSA:3.20.20.80 54 432 1.3E-108 T 14-10-2018 AMIS_38990 eb0eb8e71f9bccba6e0128d2a054a5ce 660 Pfam PF00041 Fibronectin type III domain 474 542 5.3E-7 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 AMIS_38990 eb0eb8e71f9bccba6e0128d2a054a5ce 660 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 68 406 2.7E-60 T 14-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 AMIS_1200 51dc844e724ea2df206401baf535652f 616 Gene3D G3DSA:2.60.40.1120 183 268 3.3E-11 T 14-10-2018 AMIS_1200 51dc844e724ea2df206401baf535652f 616 SUPERFAMILY SSF49464 183 267 3.3E-9 T 14-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily AMIS_1200 51dc844e724ea2df206401baf535652f 616 Pfam PF13620 Carboxypeptidase regulatory-like domain 183 266 7.6E-11 T 14-10-2018 AMIS_76320 02ad2b519c29174c8be851d6be22162f 688 PRINTS PR01007 Flagellar hook-length control protein signature 574 592 5.1E-6 T 14-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 AMIS_76320 02ad2b519c29174c8be851d6be22162f 688 PRINTS PR01007 Flagellar hook-length control protein signature 607 630 5.1E-6 T 14-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 AMIS_76320 02ad2b519c29174c8be851d6be22162f 688 PRINTS PR01007 Flagellar hook-length control protein signature 525 547 5.1E-6 T 14-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 AMIS_76320 02ad2b519c29174c8be851d6be22162f 688 PRINTS PR01007 Flagellar hook-length control protein signature 285 302 5.1E-6 T 14-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 AMIS_76320 02ad2b519c29174c8be851d6be22162f 688 Pfam PF02120 Flagellar hook-length control protein FliK 565 641 6.8E-13 T 14-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal AMIS_76320 02ad2b519c29174c8be851d6be22162f 688 Gene3D G3DSA:3.30.750.140 540 650 2.3E-11 T 14-10-2018 IPR038610 FliK-like, C-terminal domain superfamily AMIS_42850 180c9e44ec7187d93ed412e5da338d9a 129 Pfam PF12680 SnoaL-like domain 5 96 1.1E-11 T 14-10-2018 IPR037401 SnoaL-like domain AMIS_42850 180c9e44ec7187d93ed412e5da338d9a 129 SUPERFAMILY SSF54427 3 103 1.25E-23 T 14-10-2018 IPR032710 NTF2-like domain superfamily AMIS_42850 180c9e44ec7187d93ed412e5da338d9a 129 Gene3D G3DSA:3.10.450.50 1 122 1.2E-42 T 14-10-2018 AMIS_64040 5ee0c881e6f8c93633af5203f85517f4 708 SUPERFAMILY SSF47384 477 551 1.75E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_64040 5ee0c881e6f8c93633af5203f85517f4 708 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 597 706 3.7E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_64040 5ee0c881e6f8c93633af5203f85517f4 708 Gene3D G3DSA:3.30.450.40 49 184 2.4E-14 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_64040 5ee0c881e6f8c93633af5203f85517f4 708 SUPERFAMILY SSF55781 53 193 5.02E-18 T 14-10-2018 AMIS_64040 5ee0c881e6f8c93633af5203f85517f4 708 SUPERFAMILY SSF55781 311 473 1.85E-14 T 14-10-2018 AMIS_64040 5ee0c881e6f8c93633af5203f85517f4 708 Pfam PF13185 GAF domain 331 469 3.8E-9 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_64040 5ee0c881e6f8c93633af5203f85517f4 708 Gene3D G3DSA:1.10.287.130 475 555 2.5E-16 T 14-10-2018 AMIS_64040 5ee0c881e6f8c93633af5203f85517f4 708 Gene3D G3DSA:3.30.565.10 556 707 7.2E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_64040 5ee0c881e6f8c93633af5203f85517f4 708 SMART SM00065 331 478 0.0097 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_64040 5ee0c881e6f8c93633af5203f85517f4 708 SMART SM00065 47 195 0.0019 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_64040 5ee0c881e6f8c93633af5203f85517f4 708 SUPERFAMILY SSF55874 540 705 5.75E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_64040 5ee0c881e6f8c93633af5203f85517f4 708 Pfam PF01590 GAF domain 54 175 6.8E-5 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_64040 5ee0c881e6f8c93633af5203f85517f4 708 Gene3D G3DSA:3.30.450.40 305 473 6.4E-18 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_64040 5ee0c881e6f8c93633af5203f85517f4 708 SUPERFAMILY SSF55785 185 307 8.9E-12 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_64040 5ee0c881e6f8c93633af5203f85517f4 708 SMART SM00387 596 707 5.4E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_64040 5ee0c881e6f8c93633af5203f85517f4 708 SMART SM00388 483 551 2.8E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_64040 5ee0c881e6f8c93633af5203f85517f4 708 Pfam PF00512 His Kinase A (phospho-acceptor) domain 483 551 5.8E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_64040 5ee0c881e6f8c93633af5203f85517f4 708 Pfam PF08448 PAS fold 201 311 2.6E-8 T 14-10-2018 IPR013656 PAS fold-4 AMIS_64040 5ee0c881e6f8c93633af5203f85517f4 708 Gene3D G3DSA:3.30.450.20 185 304 2.2E-16 T 14-10-2018 AMIS_47870 b7bc19079c9b89556d9bcec4a3a06574 145 SMART SM00342 29 112 4.9E-31 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMIS_47870 b7bc19079c9b89556d9bcec4a3a06574 145 Pfam PF12833 Helix-turn-helix domain 35 114 1.7E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMIS_47870 b7bc19079c9b89556d9bcec4a3a06574 145 Gene3D G3DSA:1.10.10.60 10 119 2.3E-29 T 14-10-2018 AMIS_47870 b7bc19079c9b89556d9bcec4a3a06574 145 SUPERFAMILY SSF46689 65 115 1.61E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_47870 b7bc19079c9b89556d9bcec4a3a06574 145 SUPERFAMILY SSF46689 14 63 1.84E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_19440 83f26f39b66ec302af3096a4bb2328ed 257 Gene3D G3DSA:1.10.12.10 200 257 3.3E-28 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal AMIS_19440 83f26f39b66ec302af3096a4bb2328ed 257 Gene3D G3DSA:3.90.226.10 1 199 2.2E-72 T 14-10-2018 AMIS_19440 83f26f39b66ec302af3096a4bb2328ed 257 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 256 2.9E-58 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AMIS_19440 83f26f39b66ec302af3096a4bb2328ed 257 SUPERFAMILY SSF52096 4 257 3.32E-81 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMIS_10260 da6ca03cfccb640be3d0b29dc83a7693 875 Pfam PF00672 HAMP domain 331 396 3.4E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_10260 da6ca03cfccb640be3d0b29dc83a7693 875 Pfam PF08376 Nitrate and nitrite sensing 57 278 7.0E-25 T 14-10-2018 IPR013587 Nitrate/nitrite sensing protein AMIS_10260 da6ca03cfccb640be3d0b29dc83a7693 875 Gene3D G3DSA:1.10.287.130 422 470 1.1E-12 T 14-10-2018 AMIS_10260 da6ca03cfccb640be3d0b29dc83a7693 875 SMART SM00387 512 622 6.2E-6 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_10260 da6ca03cfccb640be3d0b29dc83a7693 875 SMART SM00304 331 400 0.0022 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_10260 da6ca03cfccb640be3d0b29dc83a7693 875 SUPERFAMILY SSF55874 511 619 1.44E-16 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_10260 da6ca03cfccb640be3d0b29dc83a7693 875 Gene3D G3DSA:3.30.565.10 471 619 1.1E-12 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_26630 a56dcbe30c9e79a8c65cab8bd4f71d74 148 Pfam PF12680 SnoaL-like domain 17 117 1.3E-11 T 14-10-2018 IPR037401 SnoaL-like domain AMIS_26630 a56dcbe30c9e79a8c65cab8bd4f71d74 148 Gene3D G3DSA:3.10.450.50 1 143 2.3E-25 T 14-10-2018 AMIS_26630 a56dcbe30c9e79a8c65cab8bd4f71d74 148 SUPERFAMILY SSF54427 3 132 1.8E-22 T 14-10-2018 IPR032710 NTF2-like domain superfamily AMIS_80530 5897f9b51f8ec6b3995df81c2b4be986 271 Gene3D G3DSA:3.40.50.1000 8 265 1.0E-51 T 14-10-2018 IPR023214 HAD superfamily AMIS_80530 5897f9b51f8ec6b3995df81c2b4be986 271 Pfam PF08282 haloacid dehalogenase-like hydrolase 10 265 1.0E-42 T 14-10-2018 AMIS_80530 5897f9b51f8ec6b3995df81c2b4be986 271 Gene3D G3DSA:3.30.1240.10 88 193 1.0E-51 T 14-10-2018 AMIS_80530 5897f9b51f8ec6b3995df81c2b4be986 271 SUPERFAMILY SSF56784 7 269 9.9E-51 T 14-10-2018 IPR036412 HAD-like superfamily AMIS_80530 5897f9b51f8ec6b3995df81c2b4be986 271 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 9 232 1.3E-17 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 AMIS_28000 4b57b6c7d68a2ce0561192c401d221be 486 Gene3D G3DSA:2.80.10.50 79 169 8.4E-20 T 14-10-2018 AMIS_28000 4b57b6c7d68a2ce0561192c401d221be 486 Pfam PF14200 Ricin-type beta-trefoil lectin domain-like 34 108 7.7E-18 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_28000 4b57b6c7d68a2ce0561192c401d221be 486 Pfam PF14200 Ricin-type beta-trefoil lectin domain-like 116 180 9.7E-12 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_28000 4b57b6c7d68a2ce0561192c401d221be 486 SUPERFAMILY SSF50370 33 170 2.37E-40 T 14-10-2018 IPR035992 Ricin B-like lectins AMIS_28000 4b57b6c7d68a2ce0561192c401d221be 486 Pfam PF04616 Glycosyl hydrolases family 43 178 468 1.7E-56 T 14-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 AMIS_28000 4b57b6c7d68a2ce0561192c401d221be 486 Gene3D G3DSA:2.80.10.50 14 78 6.8E-12 T 14-10-2018 AMIS_28000 4b57b6c7d68a2ce0561192c401d221be 486 SUPERFAMILY SSF75005 177 483 1.31E-57 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMIS_28000 4b57b6c7d68a2ce0561192c401d221be 486 SMART SM00458 35 169 4.2E-10 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_28000 4b57b6c7d68a2ce0561192c401d221be 486 Gene3D G3DSA:2.115.10.20 172 477 5.7E-82 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMIS_70810 c6df2bbf5cf4760635a90ae821a0fec3 77 Pfam PF01037 Lrp/AsnC ligand binding domain 6 74 2.3E-12 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMIS_70810 c6df2bbf5cf4760635a90ae821a0fec3 77 Gene3D G3DSA:3.30.70.920 2 74 8.8E-20 T 14-10-2018 AMIS_70810 c6df2bbf5cf4760635a90ae821a0fec3 77 SUPERFAMILY SSF54909 2 75 8.04E-15 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel AMIS_77230 949cc7f4c3584006c5845b96becd6b7b 406 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 47 190 3.0E-9 T 14-10-2018 AMIS_77230 949cc7f4c3584006c5845b96becd6b7b 406 Pfam PF13224 Domain of unknown function (DUF4032) 226 384 1.1E-62 T 14-10-2018 IPR025111 Domain of unknown function DUF4032 AMIS_77230 949cc7f4c3584006c5845b96becd6b7b 406 SUPERFAMILY SSF56112 31 168 9.35E-7 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMIS_8210 c7b18c81225dc87153ed47d1cc73b696 299 SUPERFAMILY SSF46785 2 84 1.63E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_8210 c7b18c81225dc87153ed47d1cc73b696 299 Gene3D G3DSA:3.40.190.10 170 265 1.9E-42 T 14-10-2018 AMIS_8210 c7b18c81225dc87153ed47d1cc73b696 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 3.5E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_8210 c7b18c81225dc87153ed47d1cc73b696 299 Gene3D G3DSA:1.10.10.10 1 87 1.8E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_8210 c7b18c81225dc87153ed47d1cc73b696 299 SUPERFAMILY SSF53850 89 292 5.61E-26 T 14-10-2018 AMIS_8210 c7b18c81225dc87153ed47d1cc73b696 299 Pfam PF03466 LysR substrate binding domain 95 293 2.7E-13 T 14-10-2018 IPR005119 LysR, substrate-binding AMIS_8210 c7b18c81225dc87153ed47d1cc73b696 299 Gene3D G3DSA:3.40.190.10 89 289 1.9E-42 T 14-10-2018 AMIS_8210 c7b18c81225dc87153ed47d1cc73b696 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 3.6E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_8210 c7b18c81225dc87153ed47d1cc73b696 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 3.6E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_8210 c7b18c81225dc87153ed47d1cc73b696 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 3.6E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_10190 987ba2872ec3a75b37a88fa856d78465 181 Gene3D G3DSA:3.40.630.30 1 180 9.4E-31 T 14-10-2018 AMIS_10190 987ba2872ec3a75b37a88fa856d78465 181 SUPERFAMILY SSF55729 10 176 3.9E-24 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_10190 987ba2872ec3a75b37a88fa856d78465 181 Pfam PF00583 Acetyltransferase (GNAT) family 44 152 5.1E-11 T 14-10-2018 IPR000182 GNAT domain AMIS_69780 9f2aea0e20c4893de26b21a0ad9f27dc 451 SUPERFAMILY SSF54368 13 115 3.27E-16 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMIS_69780 9f2aea0e20c4893de26b21a0ad9f27dc 451 Pfam PF00120 Glutamine synthetase, catalytic domain 118 446 7.1E-96 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMIS_69780 9f2aea0e20c4893de26b21a0ad9f27dc 451 SUPERFAMILY SSF55931 118 449 5.3E-97 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AMIS_69780 9f2aea0e20c4893de26b21a0ad9f27dc 451 Gene3D G3DSA:3.10.20.70 4 117 8.4E-7 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMIS_69780 9f2aea0e20c4893de26b21a0ad9f27dc 451 Gene3D G3DSA:3.30.590.10 119 450 1.1E-93 T 14-10-2018 AMIS_69780 9f2aea0e20c4893de26b21a0ad9f27dc 451 SMART SM01230 116 368 5.0E-93 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMIS_11330 d3fa2f750b46b5c8cf42185daf3fae87 138 PRINTS PR01243 Nucleoside diphosphate kinase signature 72 89 3.7E-39 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMIS_11330 d3fa2f750b46b5c8cf42185daf3fae87 138 PRINTS PR01243 Nucleoside diphosphate kinase signature 52 71 3.7E-39 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMIS_11330 d3fa2f750b46b5c8cf42185daf3fae87 138 PRINTS PR01243 Nucleoside diphosphate kinase signature 93 109 3.7E-39 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMIS_11330 d3fa2f750b46b5c8cf42185daf3fae87 138 PRINTS PR01243 Nucleoside diphosphate kinase signature 8 30 3.7E-39 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMIS_11330 d3fa2f750b46b5c8cf42185daf3fae87 138 PRINTS PR01243 Nucleoside diphosphate kinase signature 116 135 3.7E-39 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMIS_11330 d3fa2f750b46b5c8cf42185daf3fae87 138 Pfam PF00334 Nucleoside diphosphate kinase 6 137 7.3E-50 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMIS_11330 d3fa2f750b46b5c8cf42185daf3fae87 138 SMART SM00562 5 138 8.0E-68 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMIS_11330 d3fa2f750b46b5c8cf42185daf3fae87 138 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 116 124 - T 14-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMIS_11330 d3fa2f750b46b5c8cf42185daf3fae87 138 SUPERFAMILY SSF54919 5 136 3.8E-51 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMIS_11330 d3fa2f750b46b5c8cf42185daf3fae87 138 Gene3D G3DSA:3.30.70.141 1 138 1.5E-53 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMIS_11330 d3fa2f750b46b5c8cf42185daf3fae87 138 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 5 138 31.321 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMIS_8350 0ae123a3ab76c3b749b2f7da6b7c9f70 239 Gene3D G3DSA:3.30.450.40 18 172 3.6E-16 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_8350 0ae123a3ab76c3b749b2f7da6b7c9f70 239 Pfam PF03861 ANTAR domain 184 228 2.0E-7 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 AMIS_8350 0ae123a3ab76c3b749b2f7da6b7c9f70 239 Pfam PF13185 GAF domain 27 149 1.1E-6 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_8350 0ae123a3ab76c3b749b2f7da6b7c9f70 239 PIRSF PIRSF036625 13 239 2.9E-33 T 14-10-2018 IPR012074 GAF-ANTAR transcription anti-termination regulator, putative AMIS_8350 0ae123a3ab76c3b749b2f7da6b7c9f70 239 SMART SM01012 164 228 4.8E-5 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 AMIS_8350 0ae123a3ab76c3b749b2f7da6b7c9f70 239 SUPERFAMILY SSF55781 27 162 1.94E-16 T 14-10-2018 AMIS_5400 b644b38b66ebeede7cabc992901fc88b 319 Pfam PF00561 alpha/beta hydrolase fold 49 297 2.4E-26 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_5400 b644b38b66ebeede7cabc992901fc88b 319 PRINTS PR00111 Alpha/beta hydrolase fold signature 71 86 7.5E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_5400 b644b38b66ebeede7cabc992901fc88b 319 PRINTS PR00111 Alpha/beta hydrolase fold signature 114 127 7.5E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_5400 b644b38b66ebeede7cabc992901fc88b 319 PRINTS PR00111 Alpha/beta hydrolase fold signature 128 141 7.5E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_5400 b644b38b66ebeede7cabc992901fc88b 319 PRINTS PR00412 Epoxide hydrolase signature 287 309 3.0E-6 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_5400 b644b38b66ebeede7cabc992901fc88b 319 PRINTS PR00412 Epoxide hydrolase signature 254 270 3.0E-6 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_5400 b644b38b66ebeede7cabc992901fc88b 319 PRINTS PR00412 Epoxide hydrolase signature 71 86 3.0E-6 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_5400 b644b38b66ebeede7cabc992901fc88b 319 PRINTS PR00412 Epoxide hydrolase signature 128 141 3.0E-6 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_5400 b644b38b66ebeede7cabc992901fc88b 319 Gene3D G3DSA:3.40.50.1820 9 308 1.4E-52 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_5400 b644b38b66ebeede7cabc992901fc88b 319 SUPERFAMILY SSF53474 18 311 1.24E-52 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_75290 77b76f419dc21fb25b1734eaeb3d4e32 211 SUPERFAMILY SSF55729 11 190 2.86E-35 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_75290 77b76f419dc21fb25b1734eaeb3d4e32 211 Pfam PF13302 Acetyltransferase (GNAT) domain 17 166 3.5E-15 T 14-10-2018 IPR000182 GNAT domain AMIS_75290 77b76f419dc21fb25b1734eaeb3d4e32 211 Gene3D G3DSA:3.40.630.30 15 194 2.1E-38 T 14-10-2018 AMIS_43270 d4d876e3a61591ca8a9b36bc9efb62dc 194 Gene3D G3DSA:3.40.33.10 49 193 5.2E-49 T 14-10-2018 IPR035940 CAP superfamily AMIS_43270 d4d876e3a61591ca8a9b36bc9efb62dc 194 Pfam PF00188 Cysteine-rich secretory protein family 79 192 1.5E-23 T 14-10-2018 IPR014044 CAP domain AMIS_43270 d4d876e3a61591ca8a9b36bc9efb62dc 194 SUPERFAMILY SSF55797 71 193 9.42E-28 T 14-10-2018 IPR035940 CAP superfamily AMIS_70480 e453e10f5d80588c1e5d669b0c85702b 812 Gene3D G3DSA:3.90.550.10 188 431 3.2E-32 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_70480 e453e10f5d80588c1e5d669b0c85702b 812 Pfam PF00535 Glycosyl transferase family 2 214 321 1.4E-22 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AMIS_70480 e453e10f5d80588c1e5d669b0c85702b 812 SUPERFAMILY SSF53448 213 422 5.34E-36 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_64440 87de60c37772527e31b8bcaf7b106a21 336 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 239 303 7.6E-17 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMIS_64440 87de60c37772527e31b8bcaf7b106a21 336 Gene3D G3DSA:3.40.50.300 3 333 1.7E-89 T 14-10-2018 AMIS_64440 87de60c37772527e31b8bcaf7b106a21 336 SMART SM00382 34 237 1.1E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_64440 87de60c37772527e31b8bcaf7b106a21 336 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 312 4.9E-21 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMIS_64440 87de60c37772527e31b8bcaf7b106a21 336 Pfam PF00005 ABC transporter 26 187 4.7E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_64440 87de60c37772527e31b8bcaf7b106a21 336 SUPERFAMILY SSF52540 5 257 3.47E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_64440 87de60c37772527e31b8bcaf7b106a21 336 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_18210 e15bf09ff0a4d5ed881f163618674560 265 Gene3D G3DSA:3.40.50.1820 42 252 3.1E-32 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_18210 e15bf09ff0a4d5ed881f163618674560 265 SUPERFAMILY SSF53474 13 251 9.89E-35 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_18210 e15bf09ff0a4d5ed881f163618674560 265 Pfam PF12146 Serine aminopeptidase, S33 73 175 1.3E-9 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 AMIS_31730 bce0cfbad95dfeeb2ee508a2202841f2 275 PRINTS PR00111 Alpha/beta hydrolase fold signature 93 106 2.6E-9 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_31730 bce0cfbad95dfeeb2ee508a2202841f2 275 PRINTS PR00111 Alpha/beta hydrolase fold signature 49 64 2.6E-9 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_31730 bce0cfbad95dfeeb2ee508a2202841f2 275 PRINTS PR00111 Alpha/beta hydrolase fold signature 218 232 2.6E-9 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_31730 bce0cfbad95dfeeb2ee508a2202841f2 275 Pfam PF00561 alpha/beta hydrolase fold 24 255 5.3E-25 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_31730 bce0cfbad95dfeeb2ee508a2202841f2 275 SUPERFAMILY SSF53474 1 273 2.28E-58 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_31730 bce0cfbad95dfeeb2ee508a2202841f2 275 Gene3D G3DSA:3.40.50.1820 2 273 4.2E-73 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_76660 ddf3c5c821f140c365c3e5c45a3f7141 295 Gene3D G3DSA:3.40.50.1820 35 295 1.3E-29 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_76660 ddf3c5c821f140c365c3e5c45a3f7141 295 SUPERFAMILY SSF53474 30 294 6.42E-27 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_47680 3f91b51b45ed14dfb24ce322dc963678 307 SUPERFAMILY SSF55729 40 302 6.36E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_47680 3f91b51b45ed14dfb24ce322dc963678 307 Pfam PF13302 Acetyltransferase (GNAT) domain 157 295 2.1E-7 T 14-10-2018 IPR000182 GNAT domain AMIS_47680 3f91b51b45ed14dfb24ce322dc963678 307 Gene3D G3DSA:3.40.630.30 11 305 2.2E-25 T 14-10-2018 AMIS_19210 5d02091e8280a1cf6dcd514479d448be 181 Pfam PF01613 Flavin reductase like domain 13 155 5.7E-36 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 AMIS_19210 5d02091e8280a1cf6dcd514479d448be 181 SUPERFAMILY SSF50475 3 154 3.09E-49 T 14-10-2018 AMIS_19210 5d02091e8280a1cf6dcd514479d448be 181 Gene3D G3DSA:2.30.110.10 1 170 1.1E-50 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AMIS_19210 5d02091e8280a1cf6dcd514479d448be 181 SMART SM00903 12 155 6.6E-55 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 AMIS_78170 2d2248cd3fda33c8baeec725dd3f8bfd 368 Pfam PF09587 Bacterial capsule synthesis protein PGA_cap 50 286 1.1E-51 T 14-10-2018 IPR019079 Capsule synthesis protein, CapA AMIS_78170 2d2248cd3fda33c8baeec725dd3f8bfd 368 Gene3D G3DSA:3.60.21.10 116 258 2.0E-6 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like AMIS_78170 2d2248cd3fda33c8baeec725dd3f8bfd 368 SMART SM00854 50 289 4.9E-76 T 14-10-2018 IPR019079 Capsule synthesis protein, CapA AMIS_78170 2d2248cd3fda33c8baeec725dd3f8bfd 368 SUPERFAMILY SSF56300 49 311 1.38E-35 T 14-10-2018 AMIS_27740 96177c243fc8c03df713161ae4c6251a 201 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 64 4.0E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_27740 96177c243fc8c03df713161ae4c6251a 201 Pfam PF13305 WHG domain 92 172 8.9E-11 T 14-10-2018 IPR025996 WHG domain AMIS_27740 96177c243fc8c03df713161ae4c6251a 201 SUPERFAMILY SSF48498 89 192 6.45E-12 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_27740 96177c243fc8c03df713161ae4c6251a 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 3.1E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_27740 96177c243fc8c03df713161ae4c6251a 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 3.1E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_27740 96177c243fc8c03df713161ae4c6251a 201 Gene3D G3DSA:1.10.357.10 3 191 5.7E-36 T 14-10-2018 AMIS_27740 96177c243fc8c03df713161ae4c6251a 201 SUPERFAMILY SSF46689 5 86 1.23E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_38780 5ee624dfefea03480bdadfdc3320c9dc 1009 Gene3D G3DSA:3.20.20.80 481 770 1.5E-28 T 14-10-2018 AMIS_38780 5ee624dfefea03480bdadfdc3320c9dc 1009 SUPERFAMILY SSF49785 53 175 2.06E-31 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_38780 5ee624dfefea03480bdadfdc3320c9dc 1009 SUPERFAMILY SSF49785 884 1008 2.34E-26 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_38780 5ee624dfefea03480bdadfdc3320c9dc 1009 Gene3D G3DSA:2.60.120.260 878 1009 3.0E-33 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_38780 5ee624dfefea03480bdadfdc3320c9dc 1009 SUPERFAMILY SSF49899 179 448 4.49E-28 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily AMIS_38780 5ee624dfefea03480bdadfdc3320c9dc 1009 SUPERFAMILY SSF51445 482 766 2.23E-31 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_38780 5ee624dfefea03480bdadfdc3320c9dc 1009 Pfam PF00754 F5/8 type C domain 887 1003 5.1E-22 T 14-10-2018 IPR000421 Coagulation factor 5/8 C-terminal domain AMIS_38780 5ee624dfefea03480bdadfdc3320c9dc 1009 Pfam PF00754 F5/8 type C domain 55 170 1.4E-27 T 14-10-2018 IPR000421 Coagulation factor 5/8 C-terminal domain AMIS_38780 5ee624dfefea03480bdadfdc3320c9dc 1009 Gene3D G3DSA:2.60.120.260 45 175 4.5E-38 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_38780 5ee624dfefea03480bdadfdc3320c9dc 1009 Gene3D G3DSA:2.60.120.200 178 452 2.0E-59 T 14-10-2018 AMIS_38780 5ee624dfefea03480bdadfdc3320c9dc 1009 SMART SM00231 42 176 0.0045 T 14-10-2018 IPR000421 Coagulation factor 5/8 C-terminal domain AMIS_73690 845cc3fd797ef8a77b1d0dc331cdb641 297 Gene3D G3DSA:3.40.50.10320 12 297 3.7E-98 T 14-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 AMIS_73690 845cc3fd797ef8a77b1d0dc331cdb641 297 Hamap MF_01696 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase [mshB]. 16 293 39.82 T 14-10-2018 IPR017810 Mycothiol biosynthesis protein, MshB GO:0035595 AMIS_73690 845cc3fd797ef8a77b1d0dc331cdb641 297 TIGRFAM TIGR03445 mycothiol_MshB: N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase 17 293 5.5E-106 T 14-10-2018 IPR017810 Mycothiol biosynthesis protein, MshB GO:0035595 AMIS_73690 845cc3fd797ef8a77b1d0dc331cdb641 297 Pfam PF02585 GlcNAc-PI de-N-acetylase 17 167 1.8E-25 T 14-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 AMIS_73690 845cc3fd797ef8a77b1d0dc331cdb641 297 SUPERFAMILY SSF102588 14 294 1.2E-67 T 14-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 AMIS_43870 5843a72dbb3d9f98043fefaf0e048930 138 SUPERFAMILY SSF54427 12 125 8.14E-9 T 14-10-2018 IPR032710 NTF2-like domain superfamily AMIS_43870 5843a72dbb3d9f98043fefaf0e048930 138 Gene3D G3DSA:3.10.450.50 11 128 1.0E-9 T 14-10-2018 AMIS_68400 ba94c91ca4020e24fb8ca53fbc2ce867 460 Pfam PF13360 PQQ-like domain 209 312 6.8E-5 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat AMIS_68400 ba94c91ca4020e24fb8ca53fbc2ce867 460 Gene3D G3DSA:2.130.10.10 112 409 2.8E-15 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_68400 ba94c91ca4020e24fb8ca53fbc2ce867 460 SUPERFAMILY SSF50998 74 347 1.57E-10 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AMIS_67570 49a0216e5581ae72478b861e6f5210ae 432 SUPERFAMILY SSF53850 12 428 3.91E-62 T 14-10-2018 AMIS_67570 49a0216e5581ae72478b861e6f5210ae 432 Gene3D G3DSA:3.40.190.10 139 413 6.4E-110 T 14-10-2018 AMIS_67570 49a0216e5581ae72478b861e6f5210ae 432 Pfam PF01547 Bacterial extracellular solute-binding protein 41 321 2.1E-27 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein AMIS_67570 49a0216e5581ae72478b861e6f5210ae 432 Gene3D G3DSA:3.40.190.10 45 353 6.4E-110 T 14-10-2018 AMIS_73700 1a04d902e92403cf126e64e1feb64df5 620 Gene3D G3DSA:2.140.10.30 10 186 3.1E-17 T 14-10-2018 IPR038554 Dipeptidylpeptidase IV, N-terminal domain superfamily AMIS_73700 1a04d902e92403cf126e64e1feb64df5 620 Gene3D G3DSA:2.140.10.30 187 308 5.9E-8 T 14-10-2018 IPR038554 Dipeptidylpeptidase IV, N-terminal domain superfamily AMIS_73700 1a04d902e92403cf126e64e1feb64df5 620 SUPERFAMILY SSF53474 404 577 7.44E-32 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_73700 1a04d902e92403cf126e64e1feb64df5 620 Gene3D G3DSA:3.40.50.1820 399 592 3.2E-34 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_73700 1a04d902e92403cf126e64e1feb64df5 620 Pfam PF00326 Prolyl oligopeptidase family 452 562 2.3E-20 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AMIS_73700 1a04d902e92403cf126e64e1feb64df5 620 SUPERFAMILY SSF82171 39 354 1.88E-15 T 14-10-2018 AMIS_47420 86cf31f6989fa7bae089d70abfbf2f2a 430 Pfam PF07690 Major Facilitator Superfamily 12 331 9.6E-19 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_47420 86cf31f6989fa7bae089d70abfbf2f2a 430 Gene3D G3DSA:1.20.1250.20 5 383 6.2E-24 T 14-10-2018 AMIS_47420 86cf31f6989fa7bae089d70abfbf2f2a 430 SUPERFAMILY SSF103473 7 382 1.7E-26 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_75560 9259dd0efe2987b7aed30c1ec480f056 424 Pfam PF00571 CBS domain 363 403 3.1E-4 T 14-10-2018 IPR000644 CBS domain AMIS_75560 9259dd0efe2987b7aed30c1ec480f056 424 Pfam PF00571 CBS domain 282 344 9.6E-5 T 14-10-2018 IPR000644 CBS domain AMIS_75560 9259dd0efe2987b7aed30c1ec480f056 424 SUPERFAMILY SSF50346 5 87 8.79E-9 T 14-10-2018 IPR011033 PRC-barrel-like superfamily AMIS_75560 9259dd0efe2987b7aed30c1ec480f056 424 SMART SM00924 179 282 4.2E-32 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain AMIS_75560 9259dd0efe2987b7aed30c1ec480f056 424 SUPERFAMILY SSF158791 168 278 8.37E-28 T 14-10-2018 AMIS_75560 9259dd0efe2987b7aed30c1ec480f056 424 Gene3D G3DSA:1.25.60.10 150 277 3.9E-25 T 14-10-2018 IPR038076 MgtE, N-terminal domain superfamily AMIS_75560 9259dd0efe2987b7aed30c1ec480f056 424 Gene3D G3DSA:3.10.580.10 279 406 1.0E-25 T 14-10-2018 AMIS_75560 9259dd0efe2987b7aed30c1ec480f056 424 SUPERFAMILY SSF54631 281 415 3.0E-20 T 14-10-2018 AMIS_75560 9259dd0efe2987b7aed30c1ec480f056 424 Pfam PF03448 MgtE intracellular N domain 179 279 6.2E-25 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain AMIS_10560 6ee72957eb3207f1857f29c6b472af92 172 Pfam PF07098 Protein of unknown function (DUF1360) 62 163 1.9E-38 T 14-10-2018 IPR010773 Mycobacterium phage PG1, Gp7 AMIS_75480 e62e682ec20e199858ca1f378b348c16 715 SMART SM00305 379 424 0.0013 T 14-10-2018 IPR003586 Hint domain C-terminal Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AMIS_75480 e62e682ec20e199858ca1f378b348c16 715 SUPERFAMILY SSF102114 483 614 2.62E-8 T 14-10-2018 AMIS_75480 e62e682ec20e199858ca1f378b348c16 715 SUPERFAMILY SSF51294 85 418 2.88E-18 T 14-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AMIS_75480 e62e682ec20e199858ca1f378b348c16 715 Gene3D G3DSA:3.80.30.30 488 649 2.5E-7 T 14-10-2018 AMIS_75480 e62e682ec20e199858ca1f378b348c16 715 Gene3D G3DSA:2.170.16.10 85 187 1.3E-13 T 14-10-2018 AMIS_75480 e62e682ec20e199858ca1f378b348c16 715 SMART SM00306 83 179 0.0043 T 14-10-2018 IPR003587 Hint domain N-terminal Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AMIS_46390 7faa066042da8a905d5f82c3c3aa33ac 201 SMART SM00448 2 115 2.7E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_46390 7faa066042da8a905d5f82c3c3aa33ac 201 SUPERFAMILY SSF52172 2 130 3.42E-31 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_46390 7faa066042da8a905d5f82c3c3aa33ac 201 Pfam PF00072 Response regulator receiver domain 4 114 2.6E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_46390 7faa066042da8a905d5f82c3c3aa33ac 201 SMART SM00421 138 195 9.0E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_46390 7faa066042da8a905d5f82c3c3aa33ac 201 Pfam PF00196 Bacterial regulatory proteins, luxR family 140 195 1.6E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_46390 7faa066042da8a905d5f82c3c3aa33ac 201 SUPERFAMILY SSF46894 127 201 5.44E-18 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_46390 7faa066042da8a905d5f82c3c3aa33ac 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 183 3.0E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_46390 7faa066042da8a905d5f82c3c3aa33ac 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 141 155 3.0E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_46390 7faa066042da8a905d5f82c3c3aa33ac 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 171 3.0E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_46390 7faa066042da8a905d5f82c3c3aa33ac 201 Gene3D G3DSA:3.40.50.12740 2 201 1.2E-56 T 14-10-2018 AMIS_77610 7ad895b48c8c84ff7a3a2f52775c9fd8 474 SUPERFAMILY SSF52540 77 299 1.31E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_77610 7ad895b48c8c84ff7a3a2f52775c9fd8 474 Pfam PF13481 AAA domain 70 228 1.4E-15 T 14-10-2018 AMIS_77610 7ad895b48c8c84ff7a3a2f52775c9fd8 474 SUPERFAMILY SSF54211 299 462 9.1E-32 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMIS_77610 7ad895b48c8c84ff7a3a2f52775c9fd8 474 SMART SM00382 95 250 4.4E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_77610 7ad895b48c8c84ff7a3a2f52775c9fd8 474 Gene3D G3DSA:3.30.230.10 332 466 4.3E-12 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMIS_77610 7ad895b48c8c84ff7a3a2f52775c9fd8 474 PRINTS PR01874 DNA repair protein radA signature 180 204 1.3E-82 T 14-10-2018 AMIS_77610 7ad895b48c8c84ff7a3a2f52775c9fd8 474 PRINTS PR01874 DNA repair protein radA signature 17 41 1.3E-82 T 14-10-2018 AMIS_77610 7ad895b48c8c84ff7a3a2f52775c9fd8 474 PRINTS PR01874 DNA repair protein radA signature 219 247 1.3E-82 T 14-10-2018 AMIS_77610 7ad895b48c8c84ff7a3a2f52775c9fd8 474 PRINTS PR01874 DNA repair protein radA signature 87 115 1.3E-82 T 14-10-2018 AMIS_77610 7ad895b48c8c84ff7a3a2f52775c9fd8 474 PRINTS PR01874 DNA repair protein radA signature 254 280 1.3E-82 T 14-10-2018 AMIS_77610 7ad895b48c8c84ff7a3a2f52775c9fd8 474 PRINTS PR01874 DNA repair protein radA signature 328 351 1.3E-82 T 14-10-2018 AMIS_77610 7ad895b48c8c84ff7a3a2f52775c9fd8 474 PRINTS PR01874 DNA repair protein radA signature 130 147 1.3E-82 T 14-10-2018 AMIS_77610 7ad895b48c8c84ff7a3a2f52775c9fd8 474 Hamap MF_01498 DNA repair protein RadA [radA]. 28 465 40.523 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 AMIS_77610 7ad895b48c8c84ff7a3a2f52775c9fd8 474 TIGRFAM TIGR00416 sms: DNA repair protein RadA 9 460 3.3E-147 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 AMIS_77610 7ad895b48c8c84ff7a3a2f52775c9fd8 474 Gene3D G3DSA:3.40.50.300 72 285 2.6E-38 T 14-10-2018 AMIS_78570 af923546555e5b2c0a1fb70785db2d7c 113 SUPERFAMILY SSF52091 5 109 2.94E-23 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_78570 af923546555e5b2c0a1fb70785db2d7c 113 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 3 105 2.0E-18 T 14-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 AMIS_78570 af923546555e5b2c0a1fb70785db2d7c 113 Gene3D G3DSA:3.30.750.24 2 112 4.9E-29 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_78570 af923546555e5b2c0a1fb70785db2d7c 113 Pfam PF13466 STAS domain 15 94 2.7E-14 T 14-10-2018 IPR002645 STAS domain AMIS_6010 4a83e0edd775ff077c286d8a069df258 397 Gene3D G3DSA:2.40.30.10 341 395 3.7E-27 T 14-10-2018 AMIS_6010 4a83e0edd775ff077c286d8a069df258 397 SUPERFAMILY SSF50465 305 397 4.89E-36 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AMIS_6010 4a83e0edd775ff077c286d8a069df258 397 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 2.2E-56 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_6010 4a83e0edd775ff077c286d8a069df258 397 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 397 58.917 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AMIS_6010 4a83e0edd775ff077c286d8a069df258 397 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 395 1.8E-219 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AMIS_6010 4a83e0edd775ff077c286d8a069df258 397 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 149 1.1E-12 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AMIS_6010 4a83e0edd775ff077c286d8a069df258 397 SUPERFAMILY SSF52540 6 221 6.54E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_6010 4a83e0edd775ff077c286d8a069df258 397 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 53 68 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site AMIS_6010 4a83e0edd775ff077c286d8a069df258 397 Pfam PF03143 Elongation factor Tu C-terminal domain 302 395 1.0E-32 T 14-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AMIS_6010 4a83e0edd775ff077c286d8a069df258 397 PRINTS PR00315 GTP-binding elongation factor signature 96 107 6.4E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_6010 4a83e0edd775ff077c286d8a069df258 397 PRINTS PR00315 GTP-binding elongation factor signature 60 68 6.4E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_6010 4a83e0edd775ff077c286d8a069df258 397 PRINTS PR00315 GTP-binding elongation factor signature 14 27 6.4E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_6010 4a83e0edd775ff077c286d8a069df258 397 PRINTS PR00315 GTP-binding elongation factor signature 80 90 6.4E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_6010 4a83e0edd775ff077c286d8a069df258 397 PRINTS PR00315 GTP-binding elongation factor signature 133 142 6.4E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_6010 4a83e0edd775ff077c286d8a069df258 397 SUPERFAMILY SSF50447 207 304 1.31E-29 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AMIS_6010 4a83e0edd775ff077c286d8a069df258 397 Gene3D G3DSA:2.40.30.10 208 337 6.0E-53 T 14-10-2018 AMIS_6010 4a83e0edd775ff077c286d8a069df258 397 Pfam PF03144 Elongation factor Tu domain 2 227 296 8.0E-17 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AMIS_6010 4a83e0edd775ff077c286d8a069df258 397 Gene3D G3DSA:3.40.50.300 1 205 1.3E-67 T 14-10-2018 AMIS_51920 5b9499d83a06a12fa6481639a68c3e73 474 SUPERFAMILY SSF52540 51 346 3.19E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_51920 5b9499d83a06a12fa6481639a68c3e73 474 Gene3D G3DSA:3.40.50.300 49 260 1.3E-26 T 14-10-2018 AMIS_46910 fe192c38c2ec838bd8f7c014cbfc237f 159 Gene3D G3DSA:3.90.79.10 5 136 6.6E-24 T 14-10-2018 AMIS_46910 fe192c38c2ec838bd8f7c014cbfc237f 159 SUPERFAMILY SSF55811 11 129 5.96E-24 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMIS_46910 fe192c38c2ec838bd8f7c014cbfc237f 159 Pfam PF00293 NUDIX domain 14 126 7.8E-18 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMIS_46910 fe192c38c2ec838bd8f7c014cbfc237f 159 PRINTS PR00502 NUDIX hydrolase family signature 54 69 1.7E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AMIS_46910 fe192c38c2ec838bd8f7c014cbfc237f 159 PRINTS PR00502 NUDIX hydrolase family signature 40 54 1.7E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AMIS_46910 fe192c38c2ec838bd8f7c014cbfc237f 159 ProSitePatterns PS00893 Nudix box signature. 45 66 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMIS_7070 465080c562f4c23a5529a8609b311c2c 311 SUPERFAMILY SSF161098 103 293 2.75E-24 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_7070 465080c562f4c23a5529a8609b311c2c 311 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 31 70 6.8E-7 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AMIS_7070 465080c562f4c23a5529a8609b311c2c 311 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 124 311 2.5E-24 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_7070 465080c562f4c23a5529a8609b311c2c 311 Gene3D G3DSA:1.10.3720.10 95 311 1.1E-23 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_19110 6a01cb132cdde6fe6595399ef7807c21 287 Gene3D G3DSA:3.40.50.720 4 284 1.3E-119 T 14-10-2018 AMIS_19110 6a01cb132cdde6fe6595399ef7807c21 287 SMART SM00859 3 116 6.9E-5 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AMIS_19110 6a01cb132cdde6fe6595399ef7807c21 287 SUPERFAMILY SSF51735 2 148 7.18E-22 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_19110 6a01cb132cdde6fe6595399ef7807c21 287 Gene3D G3DSA:3.30.360.10 124 265 1.3E-119 T 14-10-2018 AMIS_19110 6a01cb132cdde6fe6595399ef7807c21 287 Pfam PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation 124 265 1.7E-61 T 14-10-2018 IPR015426 Acetaldehyde dehydrogenase, C-terminal GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 AMIS_19110 6a01cb132cdde6fe6595399ef7807c21 287 PIRSF PIRSF015689 1 287 2.7E-121 T 14-10-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 AMIS_19110 6a01cb132cdde6fe6595399ef7807c21 287 Hamap MF_01657 Acetaldehyde dehydrogenase [mhpF]. 1 287 123.735 T 14-10-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 AMIS_19110 6a01cb132cdde6fe6595399ef7807c21 287 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 109 3.1E-8 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AMIS_19110 6a01cb132cdde6fe6595399ef7807c21 287 SUPERFAMILY SSF55347 124 265 2.42E-57 T 14-10-2018 AMIS_19110 6a01cb132cdde6fe6595399ef7807c21 287 TIGRFAM TIGR03215 ac_ald_DH_ac: acetaldehyde dehydrogenase (acetylating) 3 285 9.1E-126 T 14-10-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 AMIS_47100 54c0dcc3617d62463b1601f4e2b87e48 234 Gene3D G3DSA:3.40.50.300 1 219 2.7E-58 T 14-10-2018 AMIS_47100 54c0dcc3617d62463b1601f4e2b87e48 234 Pfam PF00005 ABC transporter 21 155 2.6E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_47100 54c0dcc3617d62463b1601f4e2b87e48 234 SMART SM00382 28 204 7.3E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_47100 54c0dcc3617d62463b1601f4e2b87e48 234 SUPERFAMILY SSF52540 3 215 5.8E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_69750 dd5b2a030b4ea5a9e4d9a811791455ea 240 Pfam PF07722 Peptidase C26 3 211 6.8E-55 T 14-10-2018 IPR011697 Peptidase C26 GO:0016787 Reactome: R-HSA-6798695 AMIS_69750 dd5b2a030b4ea5a9e4d9a811791455ea 240 Gene3D G3DSA:3.40.50.880 1 237 4.6E-66 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_69750 dd5b2a030b4ea5a9e4d9a811791455ea 240 SUPERFAMILY SSF52317 27 227 8.73E-42 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_27190 9cc5d409621cf4d33440c31563b16f80 487 TIGRFAM TIGR03965 mycofact_glyco: mycofactocin system glycosyltransferase 15 471 3.1E-125 T 14-10-2018 IPR023981 Putative mycofactocin biosynthesis glycosyltransferase AMIS_27190 9cc5d409621cf4d33440c31563b16f80 487 SUPERFAMILY SSF53448 88 317 9.85E-42 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_27190 9cc5d409621cf4d33440c31563b16f80 487 Gene3D G3DSA:3.90.550.10 85 294 2.7E-34 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_27190 9cc5d409621cf4d33440c31563b16f80 487 Pfam PF00535 Glycosyl transferase family 2 93 199 6.7E-19 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AMIS_33500 e9f0434a9fc5d35d86fd2ae8c9e12eb4 202 SMART SM00448 2 115 0.0086 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_33500 e9f0434a9fc5d35d86fd2ae8c9e12eb4 202 Pfam PF00196 Bacterial regulatory proteins, luxR family 140 195 2.4E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_33500 e9f0434a9fc5d35d86fd2ae8c9e12eb4 202 Gene3D G3DSA:3.40.50.12740 2 200 5.0E-38 T 14-10-2018 AMIS_33500 e9f0434a9fc5d35d86fd2ae8c9e12eb4 202 SUPERFAMILY SSF52172 2 126 8.68E-14 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_33500 e9f0434a9fc5d35d86fd2ae8c9e12eb4 202 SMART SM00421 138 195 3.5E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_33500 e9f0434a9fc5d35d86fd2ae8c9e12eb4 202 Pfam PF00072 Response regulator receiver domain 4 112 3.0E-8 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_33500 e9f0434a9fc5d35d86fd2ae8c9e12eb4 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 141 155 3.5E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_33500 e9f0434a9fc5d35d86fd2ae8c9e12eb4 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 171 3.5E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_33500 e9f0434a9fc5d35d86fd2ae8c9e12eb4 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 183 3.5E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_33500 e9f0434a9fc5d35d86fd2ae8c9e12eb4 202 SUPERFAMILY SSF46894 129 201 7.14E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_6560 1183295c9ce1bf912110289d7b0779e3 147 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 143 27.992 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AMIS_6560 1183295c9ce1bf912110289d7b0779e3 147 Pfam PF00572 Ribosomal protein L13 14 138 4.2E-56 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AMIS_6560 1183295c9ce1bf912110289d7b0779e3 147 Gene3D G3DSA:3.90.1180.10 1 142 1.1E-61 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 AMIS_6560 1183295c9ce1bf912110289d7b0779e3 147 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 7 141 9.9E-60 T 14-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_6560 1183295c9ce1bf912110289d7b0779e3 147 PIRSF PIRSF002181 2 147 1.4E-46 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AMIS_6560 1183295c9ce1bf912110289d7b0779e3 147 SUPERFAMILY SSF52161 4 144 1.09E-58 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 AMIS_1680 6b39f998014230140020d6fc36b39807 139 Gene3D G3DSA:3.30.750.24 1 120 1.8E-26 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_1680 6b39f998014230140020d6fc36b39807 139 SUPERFAMILY SSF52091 3 112 7.65E-15 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_1680 6b39f998014230140020d6fc36b39807 139 Pfam PF01740 STAS domain 10 96 5.9E-6 T 14-10-2018 IPR002645 STAS domain AMIS_9350 23deeea6fe65304f8ad6edc586a74d49 200 Pfam PF06821 Serine hydrolase 6 181 3.4E-36 T 14-10-2018 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 AMIS_9350 23deeea6fe65304f8ad6edc586a74d49 200 SUPERFAMILY SSF53474 6 184 5.18E-27 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_9350 23deeea6fe65304f8ad6edc586a74d49 200 Gene3D G3DSA:3.40.50.1820 1 188 6.1E-37 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_31600 bb20644fe6a887c1ceb6cc6605827e31 190 SUPERFAMILY SSF50475 6 107 1.35E-11 T 14-10-2018 AMIS_31600 bb20644fe6a887c1ceb6cc6605827e31 190 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 8 99 4.2E-11 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AMIS_31600 bb20644fe6a887c1ceb6cc6605827e31 190 Gene3D G3DSA:2.30.110.10 2 132 9.6E-18 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AMIS_50710 023910451fd194e6dfd92198aebf0243 296 Gene3D G3DSA:3.90.550.10 1 292 3.0E-74 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_50710 023910451fd194e6dfd92198aebf0243 296 Pfam PF00483 Nucleotidyl transferase 2 236 1.6E-56 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AMIS_50710 023910451fd194e6dfd92198aebf0243 296 SUPERFAMILY SSF53448 1 283 3.96E-81 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_50710 023910451fd194e6dfd92198aebf0243 296 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 285 3.1E-125 T 14-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 AMIS_77370 689948ba29869b2c414a4ac36a80abb6 963 Gene3D G3DSA:1.25.40.10 645 748 4.9E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_77370 689948ba29869b2c414a4ac36a80abb6 963 Pfam PF00486 Transcriptional regulatory protein, C terminal 9 58 1.7E-6 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_77370 689948ba29869b2c414a4ac36a80abb6 963 SMART SM00862 8 70 9.6E-5 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_77370 689948ba29869b2c414a4ac36a80abb6 963 Gene3D G3DSA:3.40.50.300 237 351 2.1E-5 T 14-10-2018 AMIS_77370 689948ba29869b2c414a4ac36a80abb6 963 Gene3D G3DSA:1.10.10.10 1 72 5.5E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_77370 689948ba29869b2c414a4ac36a80abb6 963 SUPERFAMILY SSF52540 234 489 5.68E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_77370 689948ba29869b2c414a4ac36a80abb6 963 SMART SM00028 79 112 210.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_77370 689948ba29869b2c414a4ac36a80abb6 963 SMART SM00028 834 867 5.8 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_77370 689948ba29869b2c414a4ac36a80abb6 963 SMART SM00028 710 743 24.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_77370 689948ba29869b2c414a4ac36a80abb6 963 SMART SM00028 672 705 56.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_77370 689948ba29869b2c414a4ac36a80abb6 963 SMART SM00028 874 907 430.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_77370 689948ba29869b2c414a4ac36a80abb6 963 PRINTS PR00364 Disease resistance protein signature 261 276 3.7E-10 T 14-10-2018 AMIS_77370 689948ba29869b2c414a4ac36a80abb6 963 PRINTS PR00364 Disease resistance protein signature 339 353 3.7E-10 T 14-10-2018 AMIS_77370 689948ba29869b2c414a4ac36a80abb6 963 PRINTS PR00364 Disease resistance protein signature 423 437 3.7E-10 T 14-10-2018 AMIS_77370 689948ba29869b2c414a4ac36a80abb6 963 Pfam PF00931 NB-ARC domain 244 493 1.9E-13 T 14-10-2018 IPR002182 NB-ARC GO:0043531 Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-6798695|Reactome: R-HSA-6803207|Reactome: R-HSA-8953750 AMIS_77370 689948ba29869b2c414a4ac36a80abb6 963 SUPERFAMILY SSF46894 6 59 6.8E-10 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_77370 689948ba29869b2c414a4ac36a80abb6 963 Pfam PF03704 Bacterial transcriptional activator domain 77 217 2.6E-38 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain AMIS_77370 689948ba29869b2c414a4ac36a80abb6 963 Gene3D G3DSA:1.25.40.10 749 908 3.2E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_77370 689948ba29869b2c414a4ac36a80abb6 963 Gene3D G3DSA:1.25.40.10 75 236 6.6E-43 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_77370 689948ba29869b2c414a4ac36a80abb6 963 SUPERFAMILY SSF48452 658 907 5.2E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_77370 689948ba29869b2c414a4ac36a80abb6 963 SMART SM01043 77 218 1.7E-43 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain AMIS_77370 689948ba29869b2c414a4ac36a80abb6 963 SUPERFAMILY SSF48452 74 231 1.56E-32 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_11900 0179e3ac2f0bb13c2d596d2b3d736d29 174 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 77 1.8E-13 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AMIS_11900 0179e3ac2f0bb13c2d596d2b3d736d29 174 SUPERFAMILY SSF53254 4 163 3.93E-25 T 14-10-2018 IPR029033 Histidine phosphatase superfamily AMIS_11900 0179e3ac2f0bb13c2d596d2b3d736d29 174 Gene3D G3DSA:3.40.50.1240 2 80 2.7E-15 T 14-10-2018 IPR029033 Histidine phosphatase superfamily AMIS_11900 0179e3ac2f0bb13c2d596d2b3d736d29 174 Gene3D G3DSA:3.40.50.1240 81 164 1.7E-6 T 14-10-2018 IPR029033 Histidine phosphatase superfamily AMIS_43310 1088a8d049be1a078f0f6ba3f8be5e92 334 Pfam PF01497 Periplasmic binding protein 103 306 1.6E-16 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain AMIS_43310 1088a8d049be1a078f0f6ba3f8be5e92 334 Gene3D G3DSA:3.40.50.1980 35 172 1.6E-39 T 14-10-2018 AMIS_43310 1088a8d049be1a078f0f6ba3f8be5e92 334 Gene3D G3DSA:3.40.50.1980 179 328 1.6E-45 T 14-10-2018 AMIS_43310 1088a8d049be1a078f0f6ba3f8be5e92 334 SUPERFAMILY SSF53807 37 313 6.67E-26 T 14-10-2018 AMIS_52950 c7c42f6cda54526b2eded784d8fad965 527 Pfam PF00672 HAMP domain 211 259 4.2E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_52950 c7c42f6cda54526b2eded784d8fad965 527 SMART SM00283 250 525 5.7E-51 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_52950 c7c42f6cda54526b2eded784d8fad965 527 SMART SM00304 211 263 9.8E-14 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_52950 c7c42f6cda54526b2eded784d8fad965 527 SUPERFAMILY SSF58104 231 524 5.23E-62 T 14-10-2018 AMIS_52950 c7c42f6cda54526b2eded784d8fad965 527 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 398 427 9.9E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_52950 c7c42f6cda54526b2eded784d8fad965 527 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 369 396 9.9E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_52950 c7c42f6cda54526b2eded784d8fad965 527 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 14 39 9.9E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_52950 c7c42f6cda54526b2eded784d8fad965 527 Pfam PF12729 Four helix bundle sensory module for signal transduction 13 139 5.0E-10 T 14-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain AMIS_52950 c7c42f6cda54526b2eded784d8fad965 527 Gene3D G3DSA:1.10.287.950 210 526 4.6E-66 T 14-10-2018 AMIS_52950 c7c42f6cda54526b2eded784d8fad965 527 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 344 495 2.5E-32 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_78040 8ab26bd4e6536c191b9bb2c0f8efc8d0 671 ProSitePatterns PS00674 AAA-protein family signature. 311 329 - T 14-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 AMIS_78040 8ab26bd4e6536c191b9bb2c0f8efc8d0 671 SUPERFAMILY SSF140990 423 619 1.57E-70 T 14-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 AMIS_78040 8ab26bd4e6536c191b9bb2c0f8efc8d0 671 Gene3D G3DSA:1.20.58.760 422 619 1.1E-70 T 14-10-2018 AMIS_78040 8ab26bd4e6536c191b9bb2c0f8efc8d0 671 SMART SM00382 204 343 1.3E-23 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_78040 8ab26bd4e6536c191b9bb2c0f8efc8d0 671 SUPERFAMILY SSF52540 162 412 8.91E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_78040 8ab26bd4e6536c191b9bb2c0f8efc8d0 671 Gene3D G3DSA:3.40.50.300 156 342 1.1E-67 T 14-10-2018 AMIS_78040 8ab26bd4e6536c191b9bb2c0f8efc8d0 671 Gene3D G3DSA:1.10.8.60 343 419 7.0E-29 T 14-10-2018 AMIS_78040 8ab26bd4e6536c191b9bb2c0f8efc8d0 671 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 121 611 1.1E-231 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 AMIS_78040 8ab26bd4e6536c191b9bb2c0f8efc8d0 671 Pfam PF01434 Peptidase family M41 405 610 9.5E-80 T 14-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 AMIS_78040 8ab26bd4e6536c191b9bb2c0f8efc8d0 671 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 208 340 2.0E-43 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMIS_78040 8ab26bd4e6536c191b9bb2c0f8efc8d0 671 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 5 645 36.819 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 AMIS_9260 aebf21995510a57689171d5371836b52 566 Gene3D G3DSA:3.20.20.450 318 560 4.3E-76 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_9260 aebf21995510a57689171d5371836b52 566 SUPERFAMILY SSF141868 326 559 4.58E-71 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_9260 aebf21995510a57689171d5371836b52 566 SMART SM00086 92 134 2.2E-4 T 14-10-2018 IPR001610 PAC motif AMIS_9260 aebf21995510a57689171d5371836b52 566 Pfam PF00990 Diguanylate cyclase, GGDEF domain 159 302 6.9E-5 T 14-10-2018 IPR000160 GGDEF domain AMIS_9260 aebf21995510a57689171d5371836b52 566 SUPERFAMILY SSF55073 162 307 6.91E-9 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_9260 aebf21995510a57689171d5371836b52 566 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 29 140 5.6E-8 T 14-10-2018 IPR000014 PAS domain AMIS_9260 aebf21995510a57689171d5371836b52 566 Gene3D G3DSA:3.30.70.270 153 310 2.4E-13 T 14-10-2018 AMIS_9260 aebf21995510a57689171d5371836b52 566 SMART SM00267 144 311 8.8E-4 T 14-10-2018 IPR000160 GGDEF domain AMIS_9260 aebf21995510a57689171d5371836b52 566 SMART SM00052 319 560 4.0E-65 T 14-10-2018 IPR001633 EAL domain AMIS_9260 aebf21995510a57689171d5371836b52 566 Gene3D G3DSA:3.30.450.20 27 130 5.0E-15 T 14-10-2018 AMIS_9260 aebf21995510a57689171d5371836b52 566 SUPERFAMILY SSF55785 30 134 3.14E-13 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_9260 aebf21995510a57689171d5371836b52 566 Pfam PF08447 PAS fold 40 128 3.1E-9 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 AMIS_9260 aebf21995510a57689171d5371836b52 566 Pfam PF00563 EAL domain 326 555 4.3E-62 T 14-10-2018 IPR001633 EAL domain AMIS_39230 aa14cef43e18ab7597f9bf273ebc6700 207 Pfam PF00072 Response regulator receiver domain 2 104 2.0E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_39230 aa14cef43e18ab7597f9bf273ebc6700 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 158 174 7.0E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_39230 aa14cef43e18ab7597f9bf273ebc6700 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 144 158 7.0E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_39230 aa14cef43e18ab7597f9bf273ebc6700 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 174 186 7.0E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_39230 aa14cef43e18ab7597f9bf273ebc6700 207 ProSitePatterns PS00622 LuxR-type HTH domain signature. 158 185 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_39230 aa14cef43e18ab7597f9bf273ebc6700 207 SMART SM00421 141 198 5.0E-25 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_39230 aa14cef43e18ab7597f9bf273ebc6700 207 Gene3D G3DSA:3.40.50.12740 1 204 8.7E-62 T 14-10-2018 AMIS_39230 aa14cef43e18ab7597f9bf273ebc6700 207 Pfam PF00196 Bacterial regulatory proteins, luxR family 144 198 5.8E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_39230 aa14cef43e18ab7597f9bf273ebc6700 207 SUPERFAMILY SSF46894 133 204 2.99E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_39230 aa14cef43e18ab7597f9bf273ebc6700 207 SUPERFAMILY SSF52172 2 123 7.68E-27 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_39230 aa14cef43e18ab7597f9bf273ebc6700 207 SMART SM00448 1 104 1.6E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_65980 22e24f55260e68f63f10179d406663ff 633 Pfam PF00326 Prolyl oligopeptidase family 428 628 1.1E-42 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AMIS_65980 22e24f55260e68f63f10179d406663ff 633 Gene3D G3DSA:2.120.10.30 213 329 3.7E-8 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AMIS_65980 22e24f55260e68f63f10179d406663ff 633 Gene3D G3DSA:2.120.10.30 1 196 5.6E-11 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AMIS_65980 22e24f55260e68f63f10179d406663ff 633 Pfam PF07676 WD40-like Beta Propeller Repeat 281 307 0.021 T 14-10-2018 IPR011659 WD40-like Beta Propeller AMIS_65980 22e24f55260e68f63f10179d406663ff 633 SUPERFAMILY SSF82171 2 318 2.0E-19 T 14-10-2018 AMIS_65980 22e24f55260e68f63f10179d406663ff 633 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 461 480 1.3E-7 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMIS_65980 22e24f55260e68f63f10179d406663ff 633 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 433 457 1.3E-7 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMIS_65980 22e24f55260e68f63f10179d406663ff 633 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 489 509 1.3E-7 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMIS_65980 22e24f55260e68f63f10179d406663ff 633 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 407 425 1.3E-7 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMIS_65980 22e24f55260e68f63f10179d406663ff 633 SUPERFAMILY SSF53474 397 628 3.72E-59 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_78770 05a1c09645af9323808eeb92f824ee6b 289 SUPERFAMILY SSF56219 13 282 1.44E-19 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AMIS_78770 05a1c09645af9323808eeb92f824ee6b 289 Gene3D G3DSA:3.60.10.10 12 287 1.9E-23 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AMIS_78770 05a1c09645af9323808eeb92f824ee6b 289 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 18 278 1.7E-9 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase AMIS_71500 7c908437bff5779c945806d8a31514c7 257 Gene3D G3DSA:1.10.12.10 199 257 1.1E-22 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal AMIS_71500 7c908437bff5779c945806d8a31514c7 257 Gene3D G3DSA:3.90.226.10 1 198 1.5E-70 T 14-10-2018 AMIS_71500 7c908437bff5779c945806d8a31514c7 257 SUPERFAMILY SSF52096 3 257 6.76E-85 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMIS_71500 7c908437bff5779c945806d8a31514c7 257 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 256 2.3E-65 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AMIS_50970 b72e76e7afacf6c5d06d35265828ee51 248 SMART SM00867 45 245 2.4E-43 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AMIS_50970 b72e76e7afacf6c5d06d35265828ee51 248 Pfam PF04264 YceI-like domain 46 244 1.4E-40 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AMIS_50970 b72e76e7afacf6c5d06d35265828ee51 248 SUPERFAMILY SSF101874 43 246 1.13E-37 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily AMIS_16850 90a2826689b0167cd8dfde7a86deddb1 234 Pfam PF00072 Response regulator receiver domain 4 112 9.8E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_16850 90a2826689b0167cd8dfde7a86deddb1 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 1.6E-25 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_16850 90a2826689b0167cd8dfde7a86deddb1 234 SUPERFAMILY SSF52172 3 123 9.11E-37 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_16850 90a2826689b0167cd8dfde7a86deddb1 234 SMART SM00448 2 112 1.5E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_16850 90a2826689b0167cd8dfde7a86deddb1 234 SUPERFAMILY SSF46894 138 232 3.68E-28 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_16850 90a2826689b0167cd8dfde7a86deddb1 234 Gene3D G3DSA:1.10.10.10 129 234 1.4E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_16850 90a2826689b0167cd8dfde7a86deddb1 234 SMART SM00862 157 232 4.1E-27 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_16850 90a2826689b0167cd8dfde7a86deddb1 234 Gene3D G3DSA:3.40.50.2300 2 128 6.3E-35 T 14-10-2018 AMIS_14840 24c3f17a2d39cdbc7f0c50c2fe426a42 247 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 4 120 8.3E-24 T 14-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMIS_14840 24c3f17a2d39cdbc7f0c50c2fe426a42 247 Pfam PF13183 4Fe-4S dicluster domain 156 228 1.3E-10 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMIS_14840 24c3f17a2d39cdbc7f0c50c2fe426a42 247 SUPERFAMILY SSF46548 119 230 3.66E-23 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AMIS_14840 24c3f17a2d39cdbc7f0c50c2fe426a42 247 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 159 170 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMIS_14840 24c3f17a2d39cdbc7f0c50c2fe426a42 247 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AMIS_14840 24c3f17a2d39cdbc7f0c50c2fe426a42 247 Gene3D G3DSA:1.10.1060.10 132 243 1.2E-13 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AMIS_14840 24c3f17a2d39cdbc7f0c50c2fe426a42 247 Gene3D G3DSA:3.10.20.30 1 116 4.4E-25 T 14-10-2018 IPR012675 Beta-grasp domain superfamily AMIS_14840 24c3f17a2d39cdbc7f0c50c2fe426a42 247 SUPERFAMILY SSF54292 2 116 1.66E-20 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AMIS_59870 c32e4cd5c888cb7bdf518004c8a61c6c 301 SUPERFAMILY SSF51569 1 294 1.05E-61 T 14-10-2018 AMIS_59870 c32e4cd5c888cb7bdf518004c8a61c6c 301 Gene3D G3DSA:3.20.20.70 1 299 7.5E-79 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_59870 c32e4cd5c888cb7bdf518004c8a61c6c 301 SMART SM01130 2 295 6.8E-66 T 14-10-2018 IPR002220 DapA-like GO:0016829 AMIS_59870 c32e4cd5c888cb7bdf518004c8a61c6c 301 Pfam PF00701 Dihydrodipicolinate synthetase family 3 293 1.2E-49 T 14-10-2018 IPR002220 DapA-like GO:0016829 AMIS_59870 c32e4cd5c888cb7bdf518004c8a61c6c 301 Hamap MF_00694 Probable 5-dehydro-4-deoxyglucarate dehydratase. 2 296 42.427 T 14-10-2018 IPR017655 5-dehydro-4-deoxyglucarate dehydratase GO:0016052|GO:0047448 KEGG: 00053+4.2.1.41|MetaCyc: PWY-6486|MetaCyc: PWY-6497|MetaCyc: PWY-6499|MetaCyc: PWY-6501 AMIS_59870 c32e4cd5c888cb7bdf518004c8a61c6c 301 PIRSF PIRSF001365 1 297 4.0E-53 T 14-10-2018 IPR002220 DapA-like GO:0016829 AMIS_24440 ecf6783aed4d10fdd6123924f018de3d 365 Pfam PF01494 FAD binding domain 6 308 6.9E-14 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 AMIS_24440 ecf6783aed4d10fdd6123924f018de3d 365 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 145 160 4.0E-9 T 14-10-2018 AMIS_24440 ecf6783aed4d10fdd6123924f018de3d 365 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 4.0E-9 T 14-10-2018 AMIS_24440 ecf6783aed4d10fdd6123924f018de3d 365 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 271 286 4.0E-9 T 14-10-2018 AMIS_24440 ecf6783aed4d10fdd6123924f018de3d 365 Gene3D G3DSA:3.50.50.60 8 329 4.0E-60 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_24440 ecf6783aed4d10fdd6123924f018de3d 365 SUPERFAMILY SSF51905 6 361 8.3E-47 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_24440 ecf6783aed4d10fdd6123924f018de3d 365 Gene3D G3DSA:3.30.9.50 41 261 4.0E-60 T 14-10-2018 AMIS_34690 0fff1ab3712627313358563de24caaf0 391 SUPERFAMILY SSF55781 21 151 1.03E-6 T 14-10-2018 AMIS_34690 0fff1ab3712627313358563de24caaf0 391 Gene3D G3DSA:3.30.450.40 14 147 1.3E-5 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_34690 0fff1ab3712627313358563de24caaf0 391 SUPERFAMILY SSF81606 182 386 1.57E-10 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_34690 0fff1ab3712627313358563de24caaf0 391 Gene3D G3DSA:3.60.40.10 166 390 7.8E-44 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_34690 0fff1ab3712627313358563de24caaf0 391 SMART SM00331 168 386 1.6E-26 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_34690 0fff1ab3712627313358563de24caaf0 391 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 194 386 3.4E-37 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_830 c969dfc9c8c110ae2bb8426482cb76a6 618 Gene3D G3DSA:2.60.34.10 349 476 3.8E-57 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 AMIS_830 c969dfc9c8c110ae2bb8426482cb76a6 618 Pfam PF00012 Hsp70 protein 80 574 7.2E-216 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMIS_830 c969dfc9c8c110ae2bb8426482cb76a6 618 Pfam PF00012 Hsp70 protein 4 78 1.3E-28 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMIS_830 c969dfc9c8c110ae2bb8426482cb76a6 618 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 309 323 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AMIS_830 c969dfc9c8c110ae2bb8426482cb76a6 618 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AMIS_830 c969dfc9c8c110ae2bb8426482cb76a6 618 PRINTS PR00301 70kDa heat shock protein signature 3 16 8.7E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMIS_830 c969dfc9c8c110ae2bb8426482cb76a6 618 PRINTS PR00301 70kDa heat shock protein signature 54 62 8.7E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMIS_830 c969dfc9c8c110ae2bb8426482cb76a6 618 PRINTS PR00301 70kDa heat shock protein signature 441 457 8.7E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMIS_830 c969dfc9c8c110ae2bb8426482cb76a6 618 PRINTS PR00301 70kDa heat shock protein signature 306 322 8.7E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMIS_830 c969dfc9c8c110ae2bb8426482cb76a6 618 PRINTS PR00301 70kDa heat shock protein signature 174 184 8.7E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMIS_830 c969dfc9c8c110ae2bb8426482cb76a6 618 PRINTS PR00301 70kDa heat shock protein signature 31 43 8.7E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMIS_830 c969dfc9c8c110ae2bb8426482cb76a6 618 PRINTS PR00301 70kDa heat shock protein signature 337 357 8.7E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMIS_830 c969dfc9c8c110ae2bb8426482cb76a6 618 PRINTS PR00301 70kDa heat shock protein signature 114 134 8.7E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMIS_830 c969dfc9c8c110ae2bb8426482cb76a6 618 PRINTS PR00301 70kDa heat shock protein signature 360 379 8.7E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMIS_830 c969dfc9c8c110ae2bb8426482cb76a6 618 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 4 574 9.3E-279 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 AMIS_830 c969dfc9c8c110ae2bb8426482cb76a6 618 Gene3D G3DSA:3.30.420.40 5 348 1.3E-144 T 14-10-2018 AMIS_830 c969dfc9c8c110ae2bb8426482cb76a6 618 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 168 181 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AMIS_830 c969dfc9c8c110ae2bb8426482cb76a6 618 Gene3D G3DSA:3.30.420.40 162 337 1.3E-144 T 14-10-2018 AMIS_830 c969dfc9c8c110ae2bb8426482cb76a6 618 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 615 36.119 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 AMIS_830 c969dfc9c8c110ae2bb8426482cb76a6 618 Gene3D G3DSA:1.20.1270.10 479 578 2.7E-28 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 AMIS_830 c969dfc9c8c110ae2bb8426482cb76a6 618 SUPERFAMILY SSF100920 356 512 2.22E-57 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 AMIS_830 c969dfc9c8c110ae2bb8426482cb76a6 618 Gene3D G3DSA:3.90.640.10 200 287 1.3E-144 T 14-10-2018 AMIS_830 c969dfc9c8c110ae2bb8426482cb76a6 618 SUPERFAMILY SSF53067 3 159 5.44E-58 T 14-10-2018 AMIS_830 c969dfc9c8c110ae2bb8426482cb76a6 618 SUPERFAMILY SSF53067 162 354 1.48E-67 T 14-10-2018 AMIS_68130 51cdb660da0efeb35da1cf34da834e3e 355 Pfam PF01068 ATP dependent DNA ligase domain 11 199 1.5E-39 T 14-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 AMIS_68130 51cdb660da0efeb35da1cf34da834e3e 355 Gene3D G3DSA:2.40.50.140 202 338 4.5E-30 T 14-10-2018 AMIS_68130 51cdb660da0efeb35da1cf34da834e3e 355 Pfam PF04679 ATP dependent DNA ligase C terminal region 220 330 1.3E-13 T 14-10-2018 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 AMIS_68130 51cdb660da0efeb35da1cf34da834e3e 355 SUPERFAMILY SSF50249 202 337 2.23E-14 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMIS_68130 51cdb660da0efeb35da1cf34da834e3e 355 SUPERFAMILY SSF56091 6 199 8.15E-45 T 14-10-2018 AMIS_68130 51cdb660da0efeb35da1cf34da834e3e 355 Gene3D G3DSA:3.30.470.30 8 201 1.8E-44 T 14-10-2018 AMIS_55220 c20ca8ee0d32dde8ab8c7aaa3b0bfb83 230 Gene3D G3DSA:2.70.50.50 28 168 1.9E-47 T 14-10-2018 AMIS_55220 c20ca8ee0d32dde8ab8c7aaa3b0bfb83 230 Pfam PF02839 Carbohydrate binding domain 202 224 6.4E-5 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AMIS_55220 c20ca8ee0d32dde8ab8c7aaa3b0bfb83 230 Gene3D G3DSA:2.10.10.20 181 230 1.6E-17 T 14-10-2018 AMIS_55220 c20ca8ee0d32dde8ab8c7aaa3b0bfb83 230 SUPERFAMILY SSF51055 181 230 1.83E-14 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AMIS_55220 c20ca8ee0d32dde8ab8c7aaa3b0bfb83 230 SMART SM00495 185 227 7.8E-12 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AMIS_55220 c20ca8ee0d32dde8ab8c7aaa3b0bfb83 230 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 28 165 4.3E-18 T 14-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal AMIS_55220 c20ca8ee0d32dde8ab8c7aaa3b0bfb83 230 SUPERFAMILY SSF81296 28 168 1.96E-35 T 14-10-2018 IPR014756 Immunoglobulin E-set AMIS_69140 7b50b62a93318d8a6d88a3f5fa8a5e76 416 Gene3D G3DSA:3.40.630.30 214 415 2.9E-51 T 14-10-2018 AMIS_69140 7b50b62a93318d8a6d88a3f5fa8a5e76 416 Pfam PF13302 Acetyltransferase (GNAT) domain 229 368 2.8E-20 T 14-10-2018 IPR000182 GNAT domain AMIS_69140 7b50b62a93318d8a6d88a3f5fa8a5e76 416 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 23 167 4.6E-43 T 14-10-2018 IPR024747 Pyridoxamine 5'-phosphate oxidase-related AMIS_69140 7b50b62a93318d8a6d88a3f5fa8a5e76 416 Gene3D G3DSA:2.30.110.10 5 213 3.3E-62 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AMIS_69140 7b50b62a93318d8a6d88a3f5fa8a5e76 416 SUPERFAMILY SSF50475 4 188 5.89E-50 T 14-10-2018 AMIS_69140 7b50b62a93318d8a6d88a3f5fa8a5e76 416 SUPERFAMILY SSF55729 220 394 5.67E-42 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_58670 5713057cc107ccf45f797411953d405a 538 Gene3D G3DSA:3.50.30.30 118 265 2.4E-79 T 14-10-2018 AMIS_58670 5713057cc107ccf45f797411953d405a 538 SUPERFAMILY SSF53187 266 492 1.07E-64 T 14-10-2018 AMIS_58670 5713057cc107ccf45f797411953d405a 538 SUPERFAMILY SSF52025 125 255 2.49E-14 T 14-10-2018 AMIS_58670 5713057cc107ccf45f797411953d405a 538 Gene3D G3DSA:3.40.630.10 79 481 2.4E-79 T 14-10-2018 AMIS_58670 5713057cc107ccf45f797411953d405a 538 Pfam PF04389 Peptidase family M28 273 487 3.8E-46 T 14-10-2018 IPR007484 Peptidase M28 AMIS_58670 5713057cc107ccf45f797411953d405a 538 Pfam PF02225 PA domain 142 252 5.2E-18 T 14-10-2018 IPR003137 PA domain AMIS_33680 3ad251195db63a04148a31991343d9f5 330 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 157 169 - T 14-10-2018 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263 AMIS_33680 3ad251195db63a04148a31991343d9f5 330 SUPERFAMILY SSF56327 158 326 1.85E-60 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AMIS_33680 3ad251195db63a04148a31991343d9f5 330 Hamap MF_01517 Malate dehydrogenase [mdh]. 3 328 55.241 T 14-10-2018 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 AMIS_33680 3ad251195db63a04148a31991343d9f5 330 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 8 148 7.7E-31 T 14-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 AMIS_33680 3ad251195db63a04148a31991343d9f5 330 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 158 324 1.1E-32 T 14-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 AMIS_33680 3ad251195db63a04148a31991343d9f5 330 Gene3D G3DSA:3.40.50.720 2 156 4.1E-51 T 14-10-2018 AMIS_33680 3ad251195db63a04148a31991343d9f5 330 SUPERFAMILY SSF51735 3 157 4.8E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_33680 3ad251195db63a04148a31991343d9f5 330 PIRSF PIRSF000102 3 328 1.1E-57 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AMIS_33680 3ad251195db63a04148a31991343d9f5 330 TIGRFAM TIGR01759 MalateDH-SF1: malate dehydrogenase 5 324 4.7E-143 T 14-10-2018 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 AMIS_33680 3ad251195db63a04148a31991343d9f5 330 Gene3D G3DSA:3.90.110.10 157 330 2.9E-65 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AMIS_40480 c2012b02f18881412037c88002706d64 979 Pfam PF16095 C-terminal of Roc, COR, domain 440 639 3.7E-55 T 14-10-2018 IPR032171 C-terminal of Roc (COR) domain KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 AMIS_40480 c2012b02f18881412037c88002706d64 979 Gene3D G3DSA:3.80.10.10 12 244 2.3E-42 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily AMIS_40480 c2012b02f18881412037c88002706d64 979 SUPERFAMILY SSF52540 264 448 9.98E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_40480 c2012b02f18881412037c88002706d64 979 Pfam PF08477 Ras of Complex, Roc, domain of DAPkinase 267 384 2.4E-23 T 14-10-2018 AMIS_40480 c2012b02f18881412037c88002706d64 979 SUPERFAMILY SSF52058 18 236 3.16E-34 T 14-10-2018 AMIS_40480 c2012b02f18881412037c88002706d64 979 Gene3D G3DSA:3.40.50.300 269 439 2.1E-52 T 14-10-2018 AMIS_40480 c2012b02f18881412037c88002706d64 979 Gene3D G3DSA:1.10.10.2190 245 492 2.1E-52 T 14-10-2018 AMIS_40480 c2012b02f18881412037c88002706d64 979 SMART SM00369 83 106 0.59 T 14-10-2018 IPR003591 Leucine-rich repeat, typical subtype AMIS_40480 c2012b02f18881412037c88002706d64 979 SMART SM00369 198 221 270.0 T 14-10-2018 IPR003591 Leucine-rich repeat, typical subtype AMIS_40480 c2012b02f18881412037c88002706d64 979 SMART SM00369 37 60 18.0 T 14-10-2018 IPR003591 Leucine-rich repeat, typical subtype AMIS_40480 c2012b02f18881412037c88002706d64 979 SMART SM00175 266 431 0.0068 T 14-10-2018 AMIS_40480 c2012b02f18881412037c88002706d64 979 PRINTS PR00449 Transforming protein P21 ras signature 310 332 2.5E-6 T 14-10-2018 AMIS_40480 c2012b02f18881412037c88002706d64 979 PRINTS PR00449 Transforming protein P21 ras signature 266 287 2.5E-6 T 14-10-2018 AMIS_38560 bfd4ed3803ce5a1f04fa7bedef6e9e58 346 Pfam PF13377 Periplasmic binding protein-like domain 174 341 4.2E-25 T 14-10-2018 AMIS_38560 bfd4ed3803ce5a1f04fa7bedef6e9e58 346 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 47 1.7E-10 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_38560 bfd4ed3803ce5a1f04fa7bedef6e9e58 346 SUPERFAMILY SSF47413 2 59 5.25E-11 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_38560 bfd4ed3803ce5a1f04fa7bedef6e9e58 346 SMART SM00354 2 73 4.4E-11 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_38560 bfd4ed3803ce5a1f04fa7bedef6e9e58 346 Gene3D G3DSA:1.10.260.40 1 57 1.0E-16 T 14-10-2018 AMIS_38560 bfd4ed3803ce5a1f04fa7bedef6e9e58 346 SUPERFAMILY SSF53822 118 345 1.4E-41 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_38560 bfd4ed3803ce5a1f04fa7bedef6e9e58 346 Gene3D G3DSA:3.40.50.2300 58 321 2.2E-48 T 14-10-2018 AMIS_38560 bfd4ed3803ce5a1f04fa7bedef6e9e58 346 Gene3D G3DSA:3.40.50.2300 166 307 2.2E-48 T 14-10-2018 AMIS_53660 a33e303e433e8b35ac303141b7a8a643 317 SUPERFAMILY SSF53335 19 271 4.48E-68 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_53660 a33e303e433e8b35ac303141b7a8a643 317 PIRSF PIRSF017269 14 282 1.2E-83 T 14-10-2018 IPR014816 tRNA (1-methyladenosine) methyltransferase catalytic subunit Gcd14 GO:0016429|GO:0030488|GO:0031515 MetaCyc: PWY-6829 AMIS_53660 a33e303e433e8b35ac303141b7a8a643 317 Gene3D G3DSA:3.40.50.150 82 275 1.1E-56 T 14-10-2018 AMIS_53660 a33e303e433e8b35ac303141b7a8a643 317 Pfam PF14801 tRNA methyltransferase complex GCD14 subunit N-term 17 67 1.0E-29 T 14-10-2018 AMIS_53660 a33e303e433e8b35ac303141b7a8a643 317 Gene3D G3DSA:3.10.330.20 15 80 5.6E-25 T 14-10-2018 AMIS_53660 a33e303e433e8b35ac303141b7a8a643 317 Pfam PF08704 tRNA methyltransferase complex GCD14 subunit 85 248 2.1E-19 T 14-10-2018 IPR014816 tRNA (1-methyladenosine) methyltransferase catalytic subunit Gcd14 GO:0016429|GO:0030488|GO:0031515 MetaCyc: PWY-6829 AMIS_73850 01ddfed1577994599229de41034ceb07 326 SUPERFAMILY SSF56112 5 299 4.9E-59 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMIS_73850 01ddfed1577994599229de41034ceb07 326 Gene3D G3DSA:3.30.200.20 3 98 4.3E-32 T 14-10-2018 AMIS_73850 01ddfed1577994599229de41034ceb07 326 Pfam PF01636 Phosphotransferase enzyme family 20 235 2.8E-46 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase AMIS_73850 01ddfed1577994599229de41034ceb07 326 Gene3D G3DSA:3.90.1200.10 100 325 1.0E-64 T 14-10-2018 AMIS_37690 4bb94665197b2af33826687746e36bd9 425 Gene3D G3DSA:3.50.50.60 29 376 2.0E-57 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_37690 4bb94665197b2af33826687746e36bd9 425 SUPERFAMILY SSF51905 7 293 4.21E-39 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_37690 4bb94665197b2af33826687746e36bd9 425 Gene3D G3DSA:3.30.9.10 124 338 2.0E-57 T 14-10-2018 AMIS_37690 4bb94665197b2af33826687746e36bd9 425 Pfam PF01266 FAD dependent oxidoreductase 29 375 1.6E-46 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AMIS_33890 9df825c4002490891fc5f95a993e19a0 231 SUPERFAMILY SSF55811 15 150 8.67E-32 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMIS_33890 9df825c4002490891fc5f95a993e19a0 231 ProSitePatterns PS00893 Nudix box signature. 50 71 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMIS_33890 9df825c4002490891fc5f95a993e19a0 231 PRINTS PR00502 NUDIX hydrolase family signature 59 74 8.2E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AMIS_33890 9df825c4002490891fc5f95a993e19a0 231 PRINTS PR00502 NUDIX hydrolase family signature 45 59 8.2E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AMIS_33890 9df825c4002490891fc5f95a993e19a0 231 SUPERFAMILY SSF46785 153 225 1.18E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_33890 9df825c4002490891fc5f95a993e19a0 231 Gene3D G3DSA:3.90.79.10 6 141 2.8E-44 T 14-10-2018 AMIS_33890 9df825c4002490891fc5f95a993e19a0 231 Pfam PF00293 NUDIX domain 18 130 2.7E-18 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMIS_33890 9df825c4002490891fc5f95a993e19a0 231 Gene3D G3DSA:1.10.10.10 146 221 5.5E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_40630 fc246365467bfddccae48b7ae8c14c71 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 187 2.8E-4 T 14-10-2018 AMIS_40630 fc246365467bfddccae48b7ae8c14c71 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 6.7E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_40630 fc246365467bfddccae48b7ae8c14c71 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 6.7E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_40630 fc246365467bfddccae48b7ae8c14c71 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 6.7E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_40630 fc246365467bfddccae48b7ae8c14c71 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 243 2.0E-67 T 14-10-2018 AMIS_40630 fc246365467bfddccae48b7ae8c14c71 246 SUPERFAMILY SSF51735 5 245 1.52E-81 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_40630 fc246365467bfddccae48b7ae8c14c71 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 3.0E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_40630 fc246365467bfddccae48b7ae8c14c71 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 3.0E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_40630 fc246365467bfddccae48b7ae8c14c71 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 3.0E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_40630 fc246365467bfddccae48b7ae8c14c71 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 3.0E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_40630 fc246365467bfddccae48b7ae8c14c71 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 3.0E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_40630 fc246365467bfddccae48b7ae8c14c71 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.0E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_40630 fc246365467bfddccae48b7ae8c14c71 246 Gene3D G3DSA:3.40.50.720 1 245 3.3E-85 T 14-10-2018 AMIS_48530 6279886216e8b54ab80475054858f3b9 278 Gene3D G3DSA:3.40.50.1820 4 273 1.1E-43 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_48530 6279886216e8b54ab80475054858f3b9 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 92 105 1.0E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_48530 6279886216e8b54ab80475054858f3b9 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 106 119 1.0E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_48530 6279886216e8b54ab80475054858f3b9 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 49 64 1.0E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_48530 6279886216e8b54ab80475054858f3b9 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 221 235 1.0E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_48530 6279886216e8b54ab80475054858f3b9 278 SUPERFAMILY SSF53474 7 272 1.73E-42 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_48530 6279886216e8b54ab80475054858f3b9 278 Pfam PF00561 alpha/beta hydrolase fold 24 262 6.1E-21 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_8040 5d3b69ff17dbf1eabf98ba9d44b98d2d 293 Pfam PF02585 GlcNAc-PI de-N-acetylase 8 153 6.4E-25 T 14-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 AMIS_8040 5d3b69ff17dbf1eabf98ba9d44b98d2d 293 Hamap MF_01482 Mycothiol S-conjugate amidase [mca]. 8 287 53.49 T 14-10-2018 IPR017811 Mycothiol S-conjugate amidase Mca GO:0010126 AMIS_8040 5d3b69ff17dbf1eabf98ba9d44b98d2d 293 SUPERFAMILY SSF102588 4 287 8.76E-75 T 14-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 AMIS_8040 5d3b69ff17dbf1eabf98ba9d44b98d2d 293 TIGRFAM TIGR03446 mycothiol_Mca: mycothiol conjugate amidase Mca 5 286 2.1E-148 T 14-10-2018 IPR017811 Mycothiol S-conjugate amidase Mca GO:0010126 AMIS_8040 5d3b69ff17dbf1eabf98ba9d44b98d2d 293 Gene3D G3DSA:3.40.50.10320 1 292 1.0E-76 T 14-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 AMIS_28070 1a06bff2955d4e8b57bef3b7a3260fac 401 Gene3D G3DSA:2.130.10.10 22 264 3.0E-9 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_28070 1a06bff2955d4e8b57bef3b7a3260fac 401 SUPERFAMILY SSF50969 56 394 7.53E-18 T 14-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like AMIS_28070 1a06bff2955d4e8b57bef3b7a3260fac 401 Gene3D G3DSA:2.130.10.10 272 401 2.2E-7 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_14670 95034ad8e195ed7467bfa8f3dc391f44 225 Pfam PF04250 Protein of unknown function (DUF429) 7 215 1.7E-43 T 14-10-2018 IPR007362 Protein of unknown function DUF429 AMIS_21960 6683d5843a74e3e39b5b98fc0ff39612 474 SUPERFAMILY SSF69322 127 427 8.63E-6 T 14-10-2018 AMIS_3290 d84909b5dcdc5ba999866c7d8d903fd7 936 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 321 335 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 AMIS_3290 d84909b5dcdc5ba999866c7d8d903fd7 936 SMART SM00493 8 122 5.0E-37 T 14-10-2018 IPR006171 TOPRIM domain AMIS_3290 d84909b5dcdc5ba999866c7d8d903fd7 936 Gene3D G3DSA:1.10.290.10 292 420 7.9E-170 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 AMIS_3290 d84909b5dcdc5ba999866c7d8d903fd7 936 Pfam PF01751 Toprim domain 10 131 1.7E-27 T 14-10-2018 IPR006171 TOPRIM domain AMIS_3290 d84909b5dcdc5ba999866c7d8d903fd7 936 Pfam PF13368 Topoisomerase C-terminal repeat 637 692 1.6E-7 T 14-10-2018 IPR025589 Topoisomerase C-terminal repeat AMIS_3290 d84909b5dcdc5ba999866c7d8d903fd7 936 Pfam PF13368 Topoisomerase C-terminal repeat 823 875 2.4E-20 T 14-10-2018 IPR025589 Topoisomerase C-terminal repeat AMIS_3290 d84909b5dcdc5ba999866c7d8d903fd7 936 Pfam PF13368 Topoisomerase C-terminal repeat 704 757 6.5E-16 T 14-10-2018 IPR025589 Topoisomerase C-terminal repeat AMIS_3290 d84909b5dcdc5ba999866c7d8d903fd7 936 Pfam PF13368 Topoisomerase C-terminal repeat 760 809 1.4E-15 T 14-10-2018 IPR025589 Topoisomerase C-terminal repeat AMIS_3290 d84909b5dcdc5ba999866c7d8d903fd7 936 Hamap MF_00952 DNA topoisomerase 1 [topA]. 8 778 53.072 T 14-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 AMIS_3290 d84909b5dcdc5ba999866c7d8d903fd7 936 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 10 656 7.4E-241 T 14-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 AMIS_3290 d84909b5dcdc5ba999866c7d8d903fd7 936 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 326 335 9.0E-35 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AMIS_3290 d84909b5dcdc5ba999866c7d8d903fd7 936 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 405 421 9.0E-35 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AMIS_3290 d84909b5dcdc5ba999866c7d8d903fd7 936 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 180 198 9.0E-35 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AMIS_3290 d84909b5dcdc5ba999866c7d8d903fd7 936 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 516 530 9.0E-35 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AMIS_3290 d84909b5dcdc5ba999866c7d8d903fd7 936 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 96 109 9.0E-35 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AMIS_3290 d84909b5dcdc5ba999866c7d8d903fd7 936 SUPERFAMILY SSF56712 8 594 3.53E-177 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain AMIS_3290 d84909b5dcdc5ba999866c7d8d903fd7 936 Pfam PF01131 DNA topoisomerase 146 590 2.1E-117 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AMIS_3290 d84909b5dcdc5ba999866c7d8d903fd7 936 Gene3D G3DSA:2.70.20.10 202 500 7.9E-170 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AMIS_3290 d84909b5dcdc5ba999866c7d8d903fd7 936 SMART SM00436 122 210 3.1E-45 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 AMIS_3290 d84909b5dcdc5ba999866c7d8d903fd7 936 Gene3D G3DSA:1.10.460.10 153 593 7.9E-170 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 AMIS_3290 d84909b5dcdc5ba999866c7d8d903fd7 936 SMART SM00437 284 553 1.4E-116 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 AMIS_3290 d84909b5dcdc5ba999866c7d8d903fd7 936 Gene3D G3DSA:3.40.50.140 7 152 6.6E-59 T 14-10-2018 AMIS_45760 bdd706d744de68bc167e6e9850b2b354 154 SUPERFAMILY SSF46955 39 151 4.76E-29 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily AMIS_45760 bdd706d744de68bc167e6e9850b2b354 154 Gene3D G3DSA:1.10.1660.10 38 153 1.1E-28 T 14-10-2018 AMIS_45760 bdd706d744de68bc167e6e9850b2b354 154 Pfam PF13411 MerR HTH family regulatory protein 40 104 2.9E-14 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_45760 bdd706d744de68bc167e6e9850b2b354 154 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 50 63 8.8E-6 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_45760 bdd706d744de68bc167e6e9850b2b354 154 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 39 50 8.8E-6 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_45760 bdd706d744de68bc167e6e9850b2b354 154 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 73 93 8.8E-6 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_45760 bdd706d744de68bc167e6e9850b2b354 154 SMART SM00422 38 106 1.0E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_39130 5ae893cf968c8397de85da4039803cd5 583 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 36 480 4.3E-146 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_39130 5ae893cf968c8397de85da4039803cd5 583 Gene3D G3DSA:1.20.210.10 16 541 3.8E-196 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_39130 5ae893cf968c8397de85da4039803cd5 583 PRINTS PR01165 Cytochrome c oxidase subunit I signature 74 97 2.2E-92 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_39130 5ae893cf968c8397de85da4039803cd5 583 PRINTS PR01165 Cytochrome c oxidase subunit I signature 386 405 2.2E-92 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_39130 5ae893cf968c8397de85da4039803cd5 583 PRINTS PR01165 Cytochrome c oxidase subunit I signature 176 194 2.2E-92 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_39130 5ae893cf968c8397de85da4039803cd5 583 PRINTS PR01165 Cytochrome c oxidase subunit I signature 205 224 2.2E-92 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_39130 5ae893cf968c8397de85da4039803cd5 583 PRINTS PR01165 Cytochrome c oxidase subunit I signature 234 255 2.2E-92 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_39130 5ae893cf968c8397de85da4039803cd5 583 PRINTS PR01165 Cytochrome c oxidase subunit I signature 358 376 2.2E-92 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_39130 5ae893cf968c8397de85da4039803cd5 583 PRINTS PR01165 Cytochrome c oxidase subunit I signature 144 156 2.2E-92 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_39130 5ae893cf968c8397de85da4039803cd5 583 PRINTS PR01165 Cytochrome c oxidase subunit I signature 27 52 2.2E-92 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_39130 5ae893cf968c8397de85da4039803cd5 583 PRINTS PR01165 Cytochrome c oxidase subunit I signature 101 125 2.2E-92 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_39130 5ae893cf968c8397de85da4039803cd5 583 PRINTS PR01165 Cytochrome c oxidase subunit I signature 301 316 2.2E-92 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_39130 5ae893cf968c8397de85da4039803cd5 583 PRINTS PR01165 Cytochrome c oxidase subunit I signature 436 457 2.2E-92 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_39130 5ae893cf968c8397de85da4039803cd5 583 PRINTS PR01165 Cytochrome c oxidase subunit I signature 255 276 2.2E-92 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_39130 5ae893cf968c8397de85da4039803cd5 583 PRINTS PR01165 Cytochrome c oxidase subunit I signature 323 344 2.2E-92 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_39130 5ae893cf968c8397de85da4039803cd5 583 SUPERFAMILY SSF81442 26 535 9.29E-167 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_39130 5ae893cf968c8397de85da4039803cd5 583 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 257 311 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_39130 5ae893cf968c8397de85da4039803cd5 583 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 29 532 1.2E-204 T 14-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 AMIS_78320 1e39c23bc82858f2d0e068f63c5709c8 298 SUPERFAMILY SSF56300 45 288 6.08E-26 T 14-10-2018 AMIS_78320 1e39c23bc82858f2d0e068f63c5709c8 298 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 50 232 5.6E-8 T 14-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 AMIS_78320 1e39c23bc82858f2d0e068f63c5709c8 298 Gene3D G3DSA:3.60.21.10 48 247 3.5E-13 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like AMIS_42930 4500ba64e068b59a995a7effb4797bfd 389 Pfam PF09298 Fumarylacetoacetase N-terminal 9 102 4.5E-19 T 14-10-2018 IPR015377 Fumarylacetoacetase, N-terminal GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 AMIS_42930 4500ba64e068b59a995a7effb4797bfd 389 SUPERFAMILY SSF63433 8 102 9.02E-22 T 14-10-2018 IPR036462 Fumarylacetoacetase, N-terminal domain superfamily GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 AMIS_42930 4500ba64e068b59a995a7effb4797bfd 389 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 108 385 4.7E-56 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 AMIS_42930 4500ba64e068b59a995a7effb4797bfd 389 SUPERFAMILY SSF56529 105 387 1.07E-83 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AMIS_42930 4500ba64e068b59a995a7effb4797bfd 389 TIGRFAM TIGR01266 fum_ac_acetase: fumarylacetoacetase 9 388 2.2E-123 T 14-10-2018 IPR005959 Fumarylacetoacetase GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 AMIS_42930 4500ba64e068b59a995a7effb4797bfd 389 Gene3D G3DSA:3.90.850.10 100 389 2.0E-104 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AMIS_42930 4500ba64e068b59a995a7effb4797bfd 389 Gene3D G3DSA:2.30.30.230 6 99 2.6E-17 T 14-10-2018 IPR036462 Fumarylacetoacetase, N-terminal domain superfamily GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 AMIS_26180 ee3f5ac1984e96c871d939fe96e3634e 225 Gene3D G3DSA:3.40.50.300 3 225 8.7E-69 T 14-10-2018 AMIS_26180 ee3f5ac1984e96c871d939fe96e3634e 225 SMART SM00382 32 218 1.9E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_26180 ee3f5ac1984e96c871d939fe96e3634e 225 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_26180 ee3f5ac1984e96c871d939fe96e3634e 225 SUPERFAMILY SSF52540 5 222 3.22E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_26180 ee3f5ac1984e96c871d939fe96e3634e 225 Pfam PF00005 ABC transporter 23 169 1.7E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_15330 fab19340a547c9d4e361857fe9a7fa01 137 PRINTS PR00618 DksA/TraR zinc finger signature 106 117 1.4E-5 T 14-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria AMIS_15330 fab19340a547c9d4e361857fe9a7fa01 137 PRINTS PR00618 DksA/TraR zinc finger signature 118 130 1.4E-5 T 14-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria AMIS_15330 fab19340a547c9d4e361857fe9a7fa01 137 Gene3D G3DSA:1.20.120.910 4 137 5.3E-32 T 14-10-2018 AMIS_15330 fab19340a547c9d4e361857fe9a7fa01 137 SUPERFAMILY SSF57716 103 136 2.14E-9 T 14-10-2018 AMIS_15330 fab19340a547c9d4e361857fe9a7fa01 137 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 101 136 2.4E-12 T 14-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AMIS_15330 fab19340a547c9d4e361857fe9a7fa01 137 SUPERFAMILY SSF109635 19 101 1.06E-8 T 14-10-2018 IPR037187 DksA, N-terminal domain superfamily AMIS_15330 fab19340a547c9d4e361857fe9a7fa01 137 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 106 130 - T 14-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site AMIS_43950 f6c8bf512ae35206573e112b9e1c4954 287 Pfam PF13560 Helix-turn-helix domain 23 85 3.3E-13 T 14-10-2018 AMIS_43950 f6c8bf512ae35206573e112b9e1c4954 287 SUPERFAMILY SSF47413 27 80 6.29E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_43950 f6c8bf512ae35206573e112b9e1c4954 287 Gene3D G3DSA:1.10.260.40 12 84 1.0E-6 T 14-10-2018 AMIS_43950 f6c8bf512ae35206573e112b9e1c4954 287 Gene3D G3DSA:3.30.450.180 112 284 3.2E-13 T 14-10-2018 AMIS_43950 f6c8bf512ae35206573e112b9e1c4954 287 SMART SM00530 10 82 4.5E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMIS_27890 721faf33ad2166b9bbeaea84842b5ae8 470 Gene3D G3DSA:3.40.190.10 57 464 6.3E-45 T 14-10-2018 AMIS_27890 721faf33ad2166b9bbeaea84842b5ae8 470 Pfam PF01547 Bacterial extracellular solute-binding protein 65 362 6.5E-23 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein AMIS_27890 721faf33ad2166b9bbeaea84842b5ae8 470 SUPERFAMILY SSF53850 61 463 2.03E-41 T 14-10-2018 AMIS_29980 14f48c02179d40cfa5b8ecb9a78ba73c 339 Gene3D G3DSA:3.30.565.10 184 334 2.1E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_29980 14f48c02179d40cfa5b8ecb9a78ba73c 339 Pfam PF00512 His Kinase A (phospho-acceptor) domain 113 179 1.9E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_29980 14f48c02179d40cfa5b8ecb9a78ba73c 339 Gene3D G3DSA:1.10.287.130 104 183 1.2E-19 T 14-10-2018 AMIS_29980 14f48c02179d40cfa5b8ecb9a78ba73c 339 SUPERFAMILY SSF47384 98 179 6.87E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_29980 14f48c02179d40cfa5b8ecb9a78ba73c 339 SMART SM00387 224 336 5.7E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_29980 14f48c02179d40cfa5b8ecb9a78ba73c 339 SMART SM00388 112 179 4.2E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_29980 14f48c02179d40cfa5b8ecb9a78ba73c 339 SUPERFAMILY SSF55874 168 334 3.14E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_29980 14f48c02179d40cfa5b8ecb9a78ba73c 339 PRINTS PR00344 Bacterial sensor protein C-terminal signature 261 275 1.7E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_29980 14f48c02179d40cfa5b8ecb9a78ba73c 339 PRINTS PR00344 Bacterial sensor protein C-terminal signature 320 333 1.7E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_29980 14f48c02179d40cfa5b8ecb9a78ba73c 339 PRINTS PR00344 Bacterial sensor protein C-terminal signature 297 315 1.7E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_29980 14f48c02179d40cfa5b8ecb9a78ba73c 339 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 225 334 3.4E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_66660 a7c78067b2c89b58a726679e557d9ed2 603 Gene3D G3DSA:3.10.180.10 411 595 2.1E-29 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_66660 a7c78067b2c89b58a726679e557d9ed2 603 Gene3D G3DSA:3.10.180.10 274 407 7.9E-17 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_66660 a7c78067b2c89b58a726679e557d9ed2 603 SUPERFAMILY SSF54593 295 588 3.92E-37 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_66660 a7c78067b2c89b58a726679e557d9ed2 603 SUPERFAMILY SSF51658 1 268 7.19E-74 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily AMIS_66660 a7c78067b2c89b58a726679e557d9ed2 603 Pfam PF01261 Xylose isomerase-like TIM barrel 18 217 7.5E-35 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AMIS_66660 a7c78067b2c89b58a726679e557d9ed2 603 Gene3D G3DSA:3.20.20.150 1 269 6.1E-71 T 14-10-2018 AMIS_39460 0b2e11fe4e80d98078754663c05e15b2 480 SUPERFAMILY SSF103473 13 471 2.09E-51 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_39460 0b2e11fe4e80d98078754663c05e15b2 480 Gene3D G3DSA:1.20.1250.20 270 475 1.0E-11 T 14-10-2018 AMIS_39460 0b2e11fe4e80d98078754663c05e15b2 480 Gene3D G3DSA:1.20.1720.10 24 257 3.1E-37 T 14-10-2018 AMIS_39460 0b2e11fe4e80d98078754663c05e15b2 480 Pfam PF07690 Major Facilitator Superfamily 28 421 2.6E-39 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_39460 0b2e11fe4e80d98078754663c05e15b2 480 PRINTS PR01036 Tetracycline resistance protein TetB signature 86 108 8.2E-7 T 14-10-2018 AMIS_39460 0b2e11fe4e80d98078754663c05e15b2 480 PRINTS PR01036 Tetracycline resistance protein TetB signature 411 430 8.2E-7 T 14-10-2018 AMIS_39460 0b2e11fe4e80d98078754663c05e15b2 480 PRINTS PR01036 Tetracycline resistance protein TetB signature 26 50 8.2E-7 T 14-10-2018 AMIS_39460 0b2e11fe4e80d98078754663c05e15b2 480 PRINTS PR01036 Tetracycline resistance protein TetB signature 148 172 8.2E-7 T 14-10-2018 AMIS_7460 362d209dbe154a09d4f21c89748b0d05 931 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 9 931 17.758 T 14-10-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AMIS_7460 362d209dbe154a09d4f21c89748b0d05 931 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 190 206 1.0E-59 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AMIS_7460 362d209dbe154a09d4f21c89748b0d05 931 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 608 637 1.0E-59 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AMIS_7460 362d209dbe154a09d4f21c89748b0d05 931 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 403 423 1.0E-59 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AMIS_7460 362d209dbe154a09d4f21c89748b0d05 931 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 135 148 1.0E-59 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AMIS_7460 362d209dbe154a09d4f21c89748b0d05 931 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 248 263 1.0E-59 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AMIS_7460 362d209dbe154a09d4f21c89748b0d05 931 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 566 586 1.0E-59 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AMIS_7460 362d209dbe154a09d4f21c89748b0d05 931 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 745 771 1.0E-59 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AMIS_7460 362d209dbe154a09d4f21c89748b0d05 931 Pfam PF00311 Phosphoenolpyruvate carboxylase 131 931 1.8E-284 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AMIS_7460 362d209dbe154a09d4f21c89748b0d05 931 Gene3D G3DSA:1.20.1440.90 281 406 1.3E-8 T 14-10-2018 AMIS_7460 362d209dbe154a09d4f21c89748b0d05 931 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 136 147 - T 14-10-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AMIS_7460 362d209dbe154a09d4f21c89748b0d05 931 SUPERFAMILY SSF51621 19 931 1.07E-271 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AMIS_10360 2488dd0c4db3bfc72afc33b20035dfde 466 SUPERFAMILY SSF53067 238 438 4.54E-43 T 14-10-2018 AMIS_10360 2488dd0c4db3bfc72afc33b20035dfde 466 SUPERFAMILY SSF53067 4 236 6.64E-53 T 14-10-2018 AMIS_10360 2488dd0c4db3bfc72afc33b20035dfde 466 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 233 1.3E-44 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AMIS_10360 2488dd0c4db3bfc72afc33b20035dfde 466 PIRSF PIRSF000538 1 459 7.9E-84 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AMIS_10360 2488dd0c4db3bfc72afc33b20035dfde 466 Gene3D G3DSA:3.30.420.40 1 234 2.3E-89 T 14-10-2018 AMIS_10360 2488dd0c4db3bfc72afc33b20035dfde 466 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 242 423 1.4E-26 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AMIS_10360 2488dd0c4db3bfc72afc33b20035dfde 466 TIGRFAM TIGR01312 XylB: xylulokinase 6 435 7.1E-122 T 14-10-2018 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 AMIS_10360 2488dd0c4db3bfc72afc33b20035dfde 466 Gene3D G3DSA:3.30.420.40 235 466 4.5E-71 T 14-10-2018 AMIS_10360 2488dd0c4db3bfc72afc33b20035dfde 466 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 336 357 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AMIS_10360 2488dd0c4db3bfc72afc33b20035dfde 466 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 123 135 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AMIS_6580 c45ad54ea01baba651185ed7f6f28566 450 Gene3D G3DSA:3.40.120.10 259 342 4.4E-64 T 14-10-2018 AMIS_6580 c45ad54ea01baba651185ed7f6f28566 450 SUPERFAMILY SSF53738 160 258 2.55E-27 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMIS_6580 c45ad54ea01baba651185ed7f6f28566 450 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 376 444 1.3E-14 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMIS_6580 c45ad54ea01baba651185ed7f6f28566 450 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 5 445 6.1E-177 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMIS_6580 c45ad54ea01baba651185ed7f6f28566 450 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 97 106 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMIS_6580 c45ad54ea01baba651185ed7f6f28566 450 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 135 2.6E-40 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMIS_6580 c45ad54ea01baba651185ed7f6f28566 450 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 236 251 3.1E-13 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMIS_6580 c45ad54ea01baba651185ed7f6f28566 450 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 96 110 3.1E-13 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMIS_6580 c45ad54ea01baba651185ed7f6f28566 450 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 176 195 3.1E-13 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMIS_6580 c45ad54ea01baba651185ed7f6f28566 450 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 161 256 7.6E-19 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMIS_6580 c45ad54ea01baba651185ed7f6f28566 450 SUPERFAMILY SSF53738 260 367 9.81E-28 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMIS_6580 c45ad54ea01baba651185ed7f6f28566 450 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 1 447 44.154 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMIS_6580 c45ad54ea01baba651185ed7f6f28566 450 SUPERFAMILY SSF55957 360 447 1.7E-23 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMIS_6580 c45ad54ea01baba651185ed7f6f28566 450 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 260 368 9.4E-31 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMIS_6580 c45ad54ea01baba651185ed7f6f28566 450 Gene3D G3DSA:3.30.310.50 373 449 1.8E-25 T 14-10-2018 AMIS_6580 c45ad54ea01baba651185ed7f6f28566 450 Gene3D G3DSA:3.40.120.10 1 141 3.5E-44 T 14-10-2018 AMIS_6580 c45ad54ea01baba651185ed7f6f28566 450 Gene3D G3DSA:3.40.120.10 176 365 4.4E-64 T 14-10-2018 AMIS_6580 c45ad54ea01baba651185ed7f6f28566 450 SUPERFAMILY SSF53738 3 183 1.06E-44 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMIS_19130 b585dc5bd5f3c88bad62c9cd2ffe5c25 514 Gene3D G3DSA:3.90.700.10 295 400 1.1E-30 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMIS_19130 b585dc5bd5f3c88bad62c9cd2ffe5c25 514 Gene3D G3DSA:3.50.50.60 224 294 1.1E-30 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_19130 b585dc5bd5f3c88bad62c9cd2ffe5c25 514 Gene3D G3DSA:3.50.50.60 1 180 6.6E-44 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_19130 b585dc5bd5f3c88bad62c9cd2ffe5c25 514 Gene3D G3DSA:3.50.50.60 415 505 4.8E-8 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_19130 b585dc5bd5f3c88bad62c9cd2ffe5c25 514 Pfam PF00890 FAD binding domain 3 437 2.2E-33 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMIS_19130 b585dc5bd5f3c88bad62c9cd2ffe5c25 514 SUPERFAMILY SSF51905 2 508 5.12E-29 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_19130 b585dc5bd5f3c88bad62c9cd2ffe5c25 514 SUPERFAMILY SSF56425 290 404 1.01E-11 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMIS_19130 b585dc5bd5f3c88bad62c9cd2ffe5c25 514 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 428 443 1.7E-6 T 14-10-2018 AMIS_19130 b585dc5bd5f3c88bad62c9cd2ffe5c25 514 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 1.7E-6 T 14-10-2018 AMIS_25160 a9e0da6ea4cb6170889abb63314b0fa4 133 Gene3D G3DSA:3.40.50.2300 4 133 3.7E-52 T 14-10-2018 AMIS_25160 a9e0da6ea4cb6170889abb63314b0fa4 133 SMART SM00226 6 131 3.2E-50 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I AMIS_25160 a9e0da6ea4cb6170889abb63314b0fa4 133 SUPERFAMILY SSF52788 5 129 2.09E-38 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily AMIS_25160 a9e0da6ea4cb6170889abb63314b0fa4 133 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 8 129 4.9E-23 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I AMIS_43150 d9995b5f499ed0e9adc7f5a98eba82e4 641 Pfam PF13768 von Willebrand factor type A domain 441 617 6.2E-7 T 14-10-2018 IPR002035 von Willebrand factor, type A AMIS_43150 d9995b5f499ed0e9adc7f5a98eba82e4 641 SMART SM00327 439 631 4.6E-18 T 14-10-2018 IPR002035 von Willebrand factor, type A AMIS_43150 d9995b5f499ed0e9adc7f5a98eba82e4 641 Gene3D G3DSA:3.40.50.410 441 636 9.7E-24 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMIS_43150 d9995b5f499ed0e9adc7f5a98eba82e4 641 Pfam PF13531 Bacterial extracellular solute-binding protein 116 405 7.4E-15 T 14-10-2018 AMIS_43150 d9995b5f499ed0e9adc7f5a98eba82e4 641 SUPERFAMILY SSF53300 440 630 1.78E-17 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMIS_74760 247b7fba4edba4c37e30030b0214a836 134 SMART SM00960 8 98 2.0E-30 T 14-10-2018 IPR004942 Roadblock/LAMTOR2 domain AMIS_74760 247b7fba4edba4c37e30030b0214a836 134 Pfam PF03259 Roadblock/LC7 domain 8 98 3.1E-22 T 14-10-2018 IPR004942 Roadblock/LAMTOR2 domain AMIS_74760 247b7fba4edba4c37e30030b0214a836 134 SUPERFAMILY SSF103196 3 127 5.58E-34 T 14-10-2018 AMIS_74760 247b7fba4edba4c37e30030b0214a836 134 Gene3D G3DSA:3.30.450.30 3 129 1.5E-44 T 14-10-2018 AMIS_54550 3a3091128c1e735bbdcf37dc02002e38 654 Gene3D G3DSA:2.60.40.10 4 190 4.0E-54 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_54550 3a3091128c1e735bbdcf37dc02002e38 654 SUPERFAMILY SSF51445 196 557 3.64E-76 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_54550 3a3091128c1e735bbdcf37dc02002e38 654 Pfam PF00128 Alpha amylase, catalytic domain 226 330 1.4E-4 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMIS_54550 3a3091128c1e735bbdcf37dc02002e38 654 Hamap MF_02124 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase [glgE]. 1 653 43.077 T 14-10-2018 IPR026585 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase GO:0016757 KEGG: 00500+2.4.99.16|MetaCyc: PWY-7900 AMIS_54550 3a3091128c1e735bbdcf37dc02002e38 654 Gene3D G3DSA:3.20.20.80 191 562 7.3E-158 T 14-10-2018 AMIS_54550 3a3091128c1e735bbdcf37dc02002e38 654 Gene3D G3DSA:2.60.40.1180 563 654 4.9E-28 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta AMIS_54550 3a3091128c1e735bbdcf37dc02002e38 654 SMART SM00642 196 551 0.0015 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMIS_54550 3a3091128c1e735bbdcf37dc02002e38 654 Gene3D G3DSA:1.20.58.280 93 171 4.0E-54 T 14-10-2018 AMIS_54550 3a3091128c1e735bbdcf37dc02002e38 654 Pfam PF11896 Domain of unknown function (DUF3416) 3 190 1.0E-50 T 14-10-2018 IPR021828 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S GO:0004553 KEGG: 00500+2.4.99.16|MetaCyc: PWY-7900 AMIS_51720 ebda404352d5f869ffc7bd20e22ac8bc 652 SUPERFAMILY SSF52402 240 614 1.13E-76 T 14-10-2018 AMIS_51720 ebda404352d5f869ffc7bd20e22ac8bc 652 Pfam PF13537 Glutamine amidotransferase domain 58 175 9.6E-38 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain AMIS_51720 ebda404352d5f869ffc7bd20e22ac8bc 652 PIRSF PIRSF001589 6 635 1.4E-165 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 AMIS_51720 ebda404352d5f869ffc7bd20e22ac8bc 652 SUPERFAMILY SSF56235 5 231 3.77E-58 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMIS_51720 ebda404352d5f869ffc7bd20e22ac8bc 652 Gene3D G3DSA:3.60.20.10 21 194 6.1E-51 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMIS_51720 ebda404352d5f869ffc7bd20e22ac8bc 652 Pfam PF00733 Asparagine synthase 250 618 1.1E-94 T 14-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 AMIS_51720 ebda404352d5f869ffc7bd20e22ac8bc 652 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 7 556 1.1E-136 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 AMIS_36670 ebf22efc338bd4cdeca1d5b27726a36a 251 Gene3D G3DSA:2.60.130.10 13 247 5.4E-84 T 14-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AMIS_36670 ebf22efc338bd4cdeca1d5b27726a36a 251 SUPERFAMILY SSF49482 28 243 3.27E-69 T 14-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AMIS_36670 ebf22efc338bd4cdeca1d5b27726a36a 251 TIGRFAM TIGR02422 protocat_beta: protocatechuate 3,4-dioxygenase, beta subunit 26 243 9.7E-107 T 14-10-2018 IPR012785 Protocatechuate 3,4-dioxygenase, beta subunit GO:0005506|GO:0018578|GO:0019619|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|MetaCyc: PWY-6041 AMIS_36670 ebf22efc338bd4cdeca1d5b27726a36a 251 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 87 115 - T 14-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 AMIS_36670 ebf22efc338bd4cdeca1d5b27726a36a 251 Pfam PF00775 Dioxygenase 57 235 2.1E-56 T 14-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 AMIS_36670 ebf22efc338bd4cdeca1d5b27726a36a 251 Pfam PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal 20 51 1.3E-11 T 14-10-2018 IPR024756 Protocatechuate 3,4-dioxygenase beta subunit, N-terminal KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|MetaCyc: PWY-6041 AMIS_66820 e2e194fe5f740d2a443646b1e36390a2 684 SUPERFAMILY SSF51445 199 519 3.47E-102 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_66820 e2e194fe5f740d2a443646b1e36390a2 684 ProSitePatterns PS00561 CBM2a (carbohydrate-binding type-2) domain signature. 646 659 - T 14-10-2018 IPR018366 Carbohydrate-binding type-2, conserved site GO:0004553|GO:0005975|GO:0030246 AMIS_66820 e2e194fe5f740d2a443646b1e36390a2 684 SUPERFAMILY SSF49785 39 180 1.28E-34 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_66820 e2e194fe5f740d2a443646b1e36390a2 684 Gene3D G3DSA:2.60.40.290 574 684 9.6E-37 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 AMIS_66820 e2e194fe5f740d2a443646b1e36390a2 684 SMART SM00633 233 520 1.5E-136 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 AMIS_66820 e2e194fe5f740d2a443646b1e36390a2 684 Pfam PF02018 Carbohydrate binding domain 40 167 1.8E-26 T 14-10-2018 IPR003305 Carbohydrate-binding, CenC-like GO:0016798 AMIS_66820 e2e194fe5f740d2a443646b1e36390a2 684 Pfam PF00553 Cellulose binding domain 581 681 1.2E-31 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 AMIS_66820 e2e194fe5f740d2a443646b1e36390a2 684 Gene3D G3DSA:2.60.120.260 32 183 2.6E-40 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_66820 e2e194fe5f740d2a443646b1e36390a2 684 SUPERFAMILY SSF49384 579 683 1.26E-32 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 AMIS_66820 e2e194fe5f740d2a443646b1e36390a2 684 SMART SM00637 581 681 3.8E-45 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 AMIS_66820 e2e194fe5f740d2a443646b1e36390a2 684 PRINTS PR00134 Glycosyl hydrolase family 10 signature 264 276 3.0E-17 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 AMIS_66820 e2e194fe5f740d2a443646b1e36390a2 684 PRINTS PR00134 Glycosyl hydrolase family 10 signature 363 374 3.0E-17 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 AMIS_66820 e2e194fe5f740d2a443646b1e36390a2 684 PRINTS PR00134 Glycosyl hydrolase family 10 signature 317 328 3.0E-17 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 AMIS_66820 e2e194fe5f740d2a443646b1e36390a2 684 PRINTS PR00134 Glycosyl hydrolase family 10 signature 391 403 3.0E-17 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 AMIS_66820 e2e194fe5f740d2a443646b1e36390a2 684 Gene3D G3DSA:3.20.20.80 191 526 1.5E-123 T 14-10-2018 AMIS_66820 e2e194fe5f740d2a443646b1e36390a2 684 Pfam PF00331 Glycosyl hydrolase family 10 199 518 6.1E-106 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 AMIS_39300 7aa70abac3e6f4a4830fb2985b5441cb 923 SMART SM00421 863 920 6.7E-21 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_39300 7aa70abac3e6f4a4830fb2985b5441cb 923 Pfam PF00196 Bacterial regulatory proteins, luxR family 865 918 6.9E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_39300 7aa70abac3e6f4a4830fb2985b5441cb 923 ProSitePatterns PS00622 LuxR-type HTH domain signature. 880 907 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_39300 7aa70abac3e6f4a4830fb2985b5441cb 923 SUPERFAMILY SSF52540 15 239 3.77E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_39300 7aa70abac3e6f4a4830fb2985b5441cb 923 Pfam PF13191 AAA ATPase domain 12 169 4.8E-15 T 14-10-2018 AMIS_39300 7aa70abac3e6f4a4830fb2985b5441cb 923 Gene3D G3DSA:1.10.10.10 812 923 9.4E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_39300 7aa70abac3e6f4a4830fb2985b5441cb 923 SUPERFAMILY SSF46894 863 921 1.67E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_39300 7aa70abac3e6f4a4830fb2985b5441cb 923 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 866 880 3.8E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_39300 7aa70abac3e6f4a4830fb2985b5441cb 923 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 880 896 3.8E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_39300 7aa70abac3e6f4a4830fb2985b5441cb 923 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 896 908 3.8E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_54150 edac23c8e717885f3a76d23347f14e30 763 Gene3D G3DSA:1.10.3060.10 575 724 1.7E-26 T 14-10-2018 AMIS_54150 edac23c8e717885f3a76d23347f14e30 763 SUPERFAMILY SSF52540 55 393 1.36E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_54150 edac23c8e717885f3a76d23347f14e30 763 SMART SM00958 224 336 9.3E-34 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 AMIS_54150 edac23c8e717885f3a76d23347f14e30 763 SUPERFAMILY SSF81886 574 723 3.92E-28 T 14-10-2018 IPR036266 SecA, Wing/Scaffold superfamily AMIS_54150 edac23c8e717885f3a76d23347f14e30 763 SUPERFAMILY SSF81767 223 345 6.8E-31 T 14-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 AMIS_54150 edac23c8e717885f3a76d23347f14e30 763 Pfam PF07517 SecA DEAD-like domain 38 378 6.0E-85 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 AMIS_54150 edac23c8e717885f3a76d23347f14e30 763 Pfam PF01043 SecA preprotein cross-linking domain 234 336 8.5E-23 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 AMIS_54150 edac23c8e717885f3a76d23347f14e30 763 ProSitePatterns PS01312 SecA family signature. 478 493 - T 14-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 AMIS_54150 edac23c8e717885f3a76d23347f14e30 763 Gene3D G3DSA:3.90.1440.10 225 346 4.0E-124 T 14-10-2018 AMIS_54150 edac23c8e717885f3a76d23347f14e30 763 TIGRFAM TIGR04221 SecA2_Mycobac: accessory Sec system translocase SecA2 8 759 0.0 T 14-10-2018 IPR026389 Protein translocase subunit SecA, Actinobacteria-type AMIS_54150 edac23c8e717885f3a76d23347f14e30 763 Gene3D G3DSA:3.40.50.300 49 393 4.0E-124 T 14-10-2018 AMIS_54150 edac23c8e717885f3a76d23347f14e30 763 SMART SM00957 12 380 2.3E-151 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 AMIS_54150 edac23c8e717885f3a76d23347f14e30 763 Hamap MF_01382 Protein translocase subunit SecA [secA]. 10 718 15.375 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMIS_54150 edac23c8e717885f3a76d23347f14e30 763 Gene3D G3DSA:3.40.50.300 500 568 1.5E-21 T 14-10-2018 AMIS_54150 edac23c8e717885f3a76d23347f14e30 763 Gene3D G3DSA:3.40.50.300 395 499 4.2E-35 T 14-10-2018 AMIS_54150 edac23c8e717885f3a76d23347f14e30 763 Pfam PF07516 SecA Wing and Scaffold domain 632 712 5.8E-14 T 14-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 AMIS_54150 edac23c8e717885f3a76d23347f14e30 763 SUPERFAMILY SSF52540 395 559 2.22E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_54150 edac23c8e717885f3a76d23347f14e30 763 PRINTS PR00906 SecA protein signature 96 110 6.0E-41 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMIS_54150 edac23c8e717885f3a76d23347f14e30 763 PRINTS PR00906 SecA protein signature 391 404 6.0E-41 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMIS_54150 edac23c8e717885f3a76d23347f14e30 763 PRINTS PR00906 SecA protein signature 58 82 6.0E-41 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMIS_54150 edac23c8e717885f3a76d23347f14e30 763 PRINTS PR00906 SecA protein signature 166 186 6.0E-41 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMIS_54150 edac23c8e717885f3a76d23347f14e30 763 PRINTS PR00906 SecA protein signature 317 339 6.0E-41 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMIS_54150 edac23c8e717885f3a76d23347f14e30 763 PRINTS PR00906 SecA protein signature 354 371 6.0E-41 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMIS_28270 74ebfa06f87446be9db3a6314d87d302 176 SUPERFAMILY SSF46785 7 169 2.63E-26 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_28270 74ebfa06f87446be9db3a6314d87d302 176 Gene3D G3DSA:1.10.10.10 4 92 1.2E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_28270 74ebfa06f87446be9db3a6314d87d302 176 Pfam PF03551 Transcriptional regulator PadR-like family 10 83 7.0E-10 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal AMIS_54500 9473347b3fb6bc0960a40abcad69b8b5 255 SUPERFAMILY SSF88946 24 104 3.53E-29 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_54500 9473347b3fb6bc0960a40abcad69b8b5 255 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 32 251 4.8E-36 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_54500 9473347b3fb6bc0960a40abcad69b8b5 255 Gene3D G3DSA:1.20.120.1810 5 103 2.1E-20 T 14-10-2018 AMIS_54500 9473347b3fb6bc0960a40abcad69b8b5 255 Pfam PF04545 Sigma-70, region 4 200 249 1.6E-17 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 AMIS_54500 9473347b3fb6bc0960a40abcad69b8b5 255 Pfam PF04539 Sigma-70 region 3 115 182 1.3E-14 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 AMIS_54500 9473347b3fb6bc0960a40abcad69b8b5 255 Gene3D G3DSA:1.10.10.10 182 253 1.1E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_54500 9473347b3fb6bc0960a40abcad69b8b5 255 SUPERFAMILY SSF88659 168 252 1.29E-18 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_54500 9473347b3fb6bc0960a40abcad69b8b5 255 Pfam PF04542 Sigma-70 region 2 36 104 3.3E-19 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_54500 9473347b3fb6bc0960a40abcad69b8b5 255 SUPERFAMILY SSF88659 108 182 7.85E-15 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_54500 9473347b3fb6bc0960a40abcad69b8b5 255 PRINTS PR00046 Major sigma-70 factor signature 236 247 2.6E-11 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMIS_54500 9473347b3fb6bc0960a40abcad69b8b5 255 PRINTS PR00046 Major sigma-70 factor signature 59 72 2.6E-11 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMIS_54500 9473347b3fb6bc0960a40abcad69b8b5 255 PRINTS PR00046 Major sigma-70 factor signature 204 216 2.6E-11 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMIS_54500 9473347b3fb6bc0960a40abcad69b8b5 255 PRINTS PR00046 Major sigma-70 factor signature 221 236 2.6E-11 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMIS_54500 9473347b3fb6bc0960a40abcad69b8b5 255 Gene3D G3DSA:1.10.10.10 105 158 1.9E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_54500 9473347b3fb6bc0960a40abcad69b8b5 255 TIGRFAM TIGR02980 SigBFG: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 30 251 1.3E-86 T 14-10-2018 IPR014322 RNA polymerase sigma-B/F/G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_77850 5cf2fe73a718e35cf56374d0b7bea7b3 172 SUPERFAMILY SSF103473 22 149 1.96E-5 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_77850 5cf2fe73a718e35cf56374d0b7bea7b3 172 Pfam PF11377 Protein of unknown function (DUF3180) 23 156 1.9E-40 T 14-10-2018 IPR021517 Protein of unknown function DUF3180 AMIS_77720 fa93996896e2f35d9d2ab701ebec5f85 252 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 2 247 2.0E-68 T 14-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 AMIS_77720 fa93996896e2f35d9d2ab701ebec5f85 252 Pfam PF03309 Type III pantothenate kinase 2 204 1.4E-65 T 14-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 AMIS_77720 fa93996896e2f35d9d2ab701ebec5f85 252 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 252 32.903 T 14-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 AMIS_77720 fa93996896e2f35d9d2ab701ebec5f85 252 Gene3D G3DSA:3.30.420.40 87 252 1.9E-53 T 14-10-2018 AMIS_77720 fa93996896e2f35d9d2ab701ebec5f85 252 SUPERFAMILY SSF53067 122 251 5.42E-34 T 14-10-2018 AMIS_77720 fa93996896e2f35d9d2ab701ebec5f85 252 Gene3D G3DSA:3.30.420.40 1 85 2.4E-24 T 14-10-2018 AMIS_77720 fa93996896e2f35d9d2ab701ebec5f85 252 SUPERFAMILY SSF53067 2 120 9.23E-32 T 14-10-2018 AMIS_34600 18634ae106acfae13c7849d0a18acaab 166 Gene3D G3DSA:1.10.357.10 1 166 8.3E-49 T 14-10-2018 AMIS_34600 18634ae106acfae13c7849d0a18acaab 166 Pfam PF00440 Bacterial regulatory proteins, tetR family 1 43 3.8E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_34600 18634ae106acfae13c7849d0a18acaab 166 SUPERFAMILY SSF46689 1 69 2.1E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_34600 18634ae106acfae13c7849d0a18acaab 166 SUPERFAMILY SSF48498 87 165 9.23E-9 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_5560 d60e090f81beeef2124102848c131e4b 379 SUPERFAMILY SSF140931 84 276 6.02E-25 T 14-10-2018 IPR036597 Fido-like domain superfamily AMIS_5560 d60e090f81beeef2124102848c131e4b 379 Pfam PF02661 Fic/DOC family 112 209 3.1E-15 T 14-10-2018 IPR003812 Fido domain AMIS_5560 d60e090f81beeef2124102848c131e4b 379 Gene3D G3DSA:1.10.3290.10 15 306 5.4E-39 T 14-10-2018 IPR036597 Fido-like domain superfamily AMIS_72690 6a329f18256fa0b2c2a7e6965b9fa8fa 570 Pfam PF05598 Transposase domain (DUF772) 53 127 9.3E-18 T 14-10-2018 IPR008490 Transposase InsH, N-terminal AMIS_72690 6a329f18256fa0b2c2a7e6965b9fa8fa 570 Pfam PF13751 Transposase DDE domain 424 544 3.5E-27 T 14-10-2018 IPR025668 Transposase DDE domain AMIS_11770 6a329f18256fa0b2c2a7e6965b9fa8fa 570 Pfam PF05598 Transposase domain (DUF772) 53 127 9.3E-18 T 14-10-2018 IPR008490 Transposase InsH, N-terminal AMIS_11770 6a329f18256fa0b2c2a7e6965b9fa8fa 570 Pfam PF13751 Transposase DDE domain 424 544 3.5E-27 T 14-10-2018 IPR025668 Transposase DDE domain AMIS_37130 816f9cb6c38a3417b70e409be6f923ce 372 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 110 314 8.0E-23 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMIS_37130 816f9cb6c38a3417b70e409be6f923ce 372 Pfam PF07497 Rho termination factor, RNA-binding domain 24 74 1.9E-10 T 14-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 AMIS_37130 816f9cb6c38a3417b70e409be6f923ce 372 Gene3D G3DSA:2.40.50.140 2 81 1.5E-11 T 14-10-2018 AMIS_37130 816f9cb6c38a3417b70e409be6f923ce 372 Gene3D G3DSA:3.40.50.300 88 366 2.4E-112 T 14-10-2018 AMIS_37130 816f9cb6c38a3417b70e409be6f923ce 372 SMART SM00382 121 300 3.2E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_37130 816f9cb6c38a3417b70e409be6f923ce 372 SUPERFAMILY SSF52540 90 321 1.04E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_37130 816f9cb6c38a3417b70e409be6f923ce 372 SUPERFAMILY SSF50249 23 75 2.06E-5 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMIS_37130 816f9cb6c38a3417b70e409be6f923ce 372 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 368 141.542 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 AMIS_40510 3db220b495b89cc3c8a88d8731d60904 191 Gene3D G3DSA:3.40.630.30 20 174 5.7E-34 T 14-10-2018 AMIS_40510 3db220b495b89cc3c8a88d8731d60904 191 SUPERFAMILY SSF55729 20 169 4.79E-29 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_40510 3db220b495b89cc3c8a88d8731d60904 191 Pfam PF13302 Acetyltransferase (GNAT) domain 26 165 1.0E-22 T 14-10-2018 IPR000182 GNAT domain AMIS_60130 91e2c5166535f352db352182146e00da 705 SUPERFAMILY SSF81296 7 149 2.8E-46 T 14-10-2018 IPR014756 Immunoglobulin E-set AMIS_60130 91e2c5166535f352db352182146e00da 705 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 12 98 2.2E-18 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 AMIS_60130 91e2c5166535f352db352182146e00da 705 Pfam PF00128 Alpha amylase, catalytic domain 191 279 3.2E-6 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMIS_60130 91e2c5166535f352db352182146e00da 705 Pfam PF00128 Alpha amylase, catalytic domain 314 533 3.8E-5 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMIS_60130 91e2c5166535f352db352182146e00da 705 SUPERFAMILY SSF51011 594 703 6.11E-26 T 14-10-2018 AMIS_60130 91e2c5166535f352db352182146e00da 705 SUPERFAMILY SSF51445 135 578 1.02E-131 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_60130 91e2c5166535f352db352182146e00da 705 Gene3D G3DSA:2.60.40.10 2 138 5.2E-46 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_60130 91e2c5166535f352db352182146e00da 705 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 8 702 0.0 T 14-10-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 AMIS_60130 91e2c5166535f352db352182146e00da 705 Gene3D G3DSA:2.60.40.1180 593 704 6.2E-19 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta AMIS_60130 91e2c5166535f352db352182146e00da 705 SMART SM00642 134 570 9.1E-8 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMIS_60130 91e2c5166535f352db352182146e00da 705 Gene3D G3DSA:3.20.20.80 140 584 7.4E-183 T 14-10-2018 AMIS_74230 c7be31b4257890c91ef8babff49842eb 325 Gene3D G3DSA:3.40.1010.20 102 198 3.3E-106 T 14-10-2018 AMIS_74230 c7be31b4257890c91ef8babff49842eb 325 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 8 287 1.4E-98 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 AMIS_74230 c7be31b4257890c91ef8babff49842eb 325 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 6 289 36.365 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 AMIS_74230 c7be31b4257890c91ef8babff49842eb 325 Pfam PF02401 LytB protein 8 285 1.5E-87 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 AMIS_74230 c7be31b4257890c91ef8babff49842eb 325 Gene3D G3DSA:3.40.1010.20 11 284 3.3E-106 T 14-10-2018 AMIS_74230 c7be31b4257890c91ef8babff49842eb 325 Gene3D G3DSA:3.40.50.11270 17 101 3.3E-106 T 14-10-2018 AMIS_43850 1231f82deb922878b3f65e270d9e81ed 621 SUPERFAMILY SSF103473 26 448 2.22E-40 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_43850 1231f82deb922878b3f65e270d9e81ed 621 PRINTS PR01438 Universal stress protein signature 568 580 1.6E-13 T 14-10-2018 IPR006015 Universal stress protein A AMIS_43850 1231f82deb922878b3f65e270d9e81ed 621 PRINTS PR01438 Universal stress protein signature 586 608 1.6E-13 T 14-10-2018 IPR006015 Universal stress protein A AMIS_43850 1231f82deb922878b3f65e270d9e81ed 621 PRINTS PR01438 Universal stress protein signature 468 486 1.6E-13 T 14-10-2018 IPR006015 Universal stress protein A AMIS_43850 1231f82deb922878b3f65e270d9e81ed 621 Pfam PF00582 Universal stress protein family 468 607 1.0E-21 T 14-10-2018 IPR006016 UspA AMIS_43850 1231f82deb922878b3f65e270d9e81ed 621 Pfam PF07690 Major Facilitator Superfamily 37 407 8.5E-18 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_43850 1231f82deb922878b3f65e270d9e81ed 621 SUPERFAMILY SSF52402 468 608 1.88E-23 T 14-10-2018 AMIS_43850 1231f82deb922878b3f65e270d9e81ed 621 Gene3D G3DSA:3.40.50.620 458 611 4.2E-31 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMIS_43850 1231f82deb922878b3f65e270d9e81ed 621 Gene3D G3DSA:1.20.1250.20 26 446 2.6E-31 T 14-10-2018 AMIS_430 6016fd8395b6df88216d9917f67d5496 469 Pfam PF13672 Protein phosphatase 2C 20 205 1.8E-12 T 14-10-2018 AMIS_430 6016fd8395b6df88216d9917f67d5496 469 SUPERFAMILY SSF81606 4 235 1.44E-63 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_430 6016fd8395b6df88216d9917f67d5496 469 SMART SM00332 2 234 3.0E-27 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_430 6016fd8395b6df88216d9917f67d5496 469 Gene3D G3DSA:3.60.40.10 2 236 8.6E-65 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_430 6016fd8395b6df88216d9917f67d5496 469 SMART SM00331 11 236 2.9E-34 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_51850 092eefdfce2dd232158ddf2d0bf53769 126 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 47 76 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AMIS_51850 092eefdfce2dd232158ddf2d0bf53769 126 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 3 125 37.516 T 14-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 AMIS_51850 092eefdfce2dd232158ddf2d0bf53769 126 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 2 125 2.5E-48 T 14-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 AMIS_51850 092eefdfce2dd232158ddf2d0bf53769 126 Pfam PF01597 Glycine cleavage H-protein 6 125 9.9E-43 T 14-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate AMIS_51850 092eefdfce2dd232158ddf2d0bf53769 126 SUPERFAMILY SSF51230 2 125 7.13E-42 T 14-10-2018 IPR011053 Single hybrid motif AMIS_51850 092eefdfce2dd232158ddf2d0bf53769 126 Gene3D G3DSA:2.40.50.100 1 126 1.4E-47 T 14-10-2018 AMIS_65010 266c1b8d45dc880395a6fcfabc02364e 474 SUPERFAMILY SSF103473 3 460 4.05E-68 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_65010 266c1b8d45dc880395a6fcfabc02364e 474 Pfam PF07690 Major Facilitator Superfamily 11 407 3.7E-48 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_65010 266c1b8d45dc880395a6fcfabc02364e 474 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 8 420 5.5E-80 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 AMIS_65010 266c1b8d45dc880395a6fcfabc02364e 474 Gene3D G3DSA:1.20.1720.10 8 252 1.3E-45 T 14-10-2018 AMIS_65010 266c1b8d45dc880395a6fcfabc02364e 474 Gene3D G3DSA:1.20.1250.20 255 461 1.2E-19 T 14-10-2018 AMIS_31670 590e1cff8cd4962d1d0ebd886f93a2a1 900 SUPERFAMILY SSF52540 3 225 6.97E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_31670 590e1cff8cd4962d1d0ebd886f93a2a1 900 Pfam PF13191 AAA ATPase domain 3 153 2.1E-16 T 14-10-2018 AMIS_31670 590e1cff8cd4962d1d0ebd886f93a2a1 900 Gene3D G3DSA:3.40.50.300 1 172 4.9E-6 T 14-10-2018 AMIS_31670 590e1cff8cd4962d1d0ebd886f93a2a1 900 SMART SM00421 829 886 3.4E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_31670 590e1cff8cd4962d1d0ebd886f93a2a1 900 SUPERFAMILY SSF46894 822 886 1.22E-14 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_31670 590e1cff8cd4962d1d0ebd886f93a2a1 900 Gene3D G3DSA:1.25.40.10 618 808 3.6E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_31670 590e1cff8cd4962d1d0ebd886f93a2a1 900 Pfam PF00196 Bacterial regulatory proteins, luxR family 832 882 1.1E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_31670 590e1cff8cd4962d1d0ebd886f93a2a1 900 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 846 862 8.4E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_31670 590e1cff8cd4962d1d0ebd886f93a2a1 900 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 862 874 8.4E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_31670 590e1cff8cd4962d1d0ebd886f93a2a1 900 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 832 846 8.4E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_31670 590e1cff8cd4962d1d0ebd886f93a2a1 900 Gene3D G3DSA:1.10.10.10 809 886 4.3E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_31670 590e1cff8cd4962d1d0ebd886f93a2a1 900 SUPERFAMILY SSF48452 654 776 3.32E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_80060 b05f3bfceca6bc6c4fe89d3f4bfcbb92 226 Gene3D G3DSA:3.40.50.970 12 226 4.5E-47 T 14-10-2018 AMIS_80060 b05f3bfceca6bc6c4fe89d3f4bfcbb92 226 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 24 207 6.9E-22 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AMIS_80060 b05f3bfceca6bc6c4fe89d3f4bfcbb92 226 SUPERFAMILY SSF52518 24 219 6.53E-44 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold AMIS_1220 74ae6a472ad150afd448c30f5d7b719a 517 PIRSF PIRSF000485 19 474 2.4E-164 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 AMIS_1220 74ae6a472ad150afd448c30f5d7b719a 517 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 23 465 4.1E-160 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 AMIS_1220 74ae6a472ad150afd448c30f5d7b719a 517 SUPERFAMILY SSF53271 259 471 1.97E-67 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like AMIS_1220 74ae6a472ad150afd448c30f5d7b719a 517 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 22 464 46.17 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 AMIS_1220 74ae6a472ad150afd448c30f5d7b719a 517 Pfam PF00156 Phosphoribosyl transferase domain 294 394 2.6E-6 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AMIS_1220 74ae6a472ad150afd448c30f5d7b719a 517 Gene3D G3DSA:3.60.20.10 23 466 2.0E-154 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMIS_1220 74ae6a472ad150afd448c30f5d7b719a 517 SUPERFAMILY SSF56235 23 277 1.63E-66 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMIS_1220 74ae6a472ad150afd448c30f5d7b719a 517 Pfam PF13537 Glutamine amidotransferase domain 105 222 4.1E-18 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain AMIS_1220 74ae6a472ad150afd448c30f5d7b719a 517 Gene3D G3DSA:3.40.50.2020 283 447 2.0E-154 T 14-10-2018 AMIS_27390 9ce335b70a9fbd700d01d5b31636b509 696 Pfam PF03176 MMPL family 32 348 2.5E-36 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 AMIS_27390 9ce335b70a9fbd700d01d5b31636b509 696 Pfam PF03176 MMPL family 442 678 1.8E-32 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 AMIS_27390 9ce335b70a9fbd700d01d5b31636b509 696 SUPERFAMILY SSF82866 445 667 6.67E-24 T 14-10-2018 AMIS_27390 9ce335b70a9fbd700d01d5b31636b509 696 SUPERFAMILY SSF82866 102 320 1.83E-22 T 14-10-2018 AMIS_40110 802a283fcf197bc4e988efb42223236e 1201 Gene3D G3DSA:3.40.50.12440 48 1201 0.0 T 14-10-2018 AMIS_40110 802a283fcf197bc4e988efb42223236e 1201 SMART SM00926 47 109 4.1E-6 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_40110 802a283fcf197bc4e988efb42223236e 1201 Pfam PF01568 Molydopterin dinucleotide binding domain 1055 1163 6.7E-21 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 AMIS_40110 802a283fcf197bc4e988efb42223236e 1201 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 14 1200 0.0 T 14-10-2018 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 AMIS_40110 802a283fcf197bc4e988efb42223236e 1201 SUPERFAMILY SSF50692 1049 1194 4.29E-40 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily AMIS_40110 802a283fcf197bc4e988efb42223236e 1201 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 52 70 - T 14-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 AMIS_40110 802a283fcf197bc4e988efb42223236e 1201 Pfam PF00384 Molybdopterin oxidoreductase 112 806 1.3E-135 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_40110 802a283fcf197bc4e988efb42223236e 1201 SUPERFAMILY SSF53706 11 1035 0.0 T 14-10-2018 AMIS_59630 1baaad1cec6f591fac2dbac10b8d85ef 345 SMART SM00382 31 220 2.7E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_59630 1baaad1cec6f591fac2dbac10b8d85ef 345 Gene3D G3DSA:3.40.50.300 1 239 5.3E-75 T 14-10-2018 AMIS_59630 1baaad1cec6f591fac2dbac10b8d85ef 345 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_59630 1baaad1cec6f591fac2dbac10b8d85ef 345 SUPERFAMILY SSF50331 238 338 2.13E-10 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal AMIS_59630 1baaad1cec6f591fac2dbac10b8d85ef 345 Pfam PF00005 ABC transporter 22 161 3.6E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_59630 1baaad1cec6f591fac2dbac10b8d85ef 345 SUPERFAMILY SSF52540 7 244 9.32E-80 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_36530 9b856a362deac8ab19c479daf6149b31 722 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 296 448 4.4E-27 T 14-10-2018 IPR000160 GGDEF domain AMIS_36530 9b856a362deac8ab19c479daf6149b31 722 Gene3D G3DSA:3.30.70.270 286 451 9.3E-41 T 14-10-2018 AMIS_36530 9b856a362deac8ab19c479daf6149b31 722 Gene3D G3DSA:3.20.20.450 462 713 1.1E-90 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_36530 9b856a362deac8ab19c479daf6149b31 722 SUPERFAMILY SSF141868 467 708 2.35E-82 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_36530 9b856a362deac8ab19c479daf6149b31 722 Pfam PF00990 Diguanylate cyclase, GGDEF domain 300 444 2.8E-31 T 14-10-2018 IPR000160 GGDEF domain AMIS_36530 9b856a362deac8ab19c479daf6149b31 722 SUPERFAMILY SSF55073 305 449 1.02E-34 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_36530 9b856a362deac8ab19c479daf6149b31 722 Pfam PF00563 EAL domain 467 702 5.5E-70 T 14-10-2018 IPR001633 EAL domain AMIS_36530 9b856a362deac8ab19c479daf6149b31 722 SMART SM00052 460 707 9.9E-106 T 14-10-2018 IPR001633 EAL domain AMIS_36530 9b856a362deac8ab19c479daf6149b31 722 SMART SM00267 289 451 4.4E-35 T 14-10-2018 IPR000160 GGDEF domain AMIS_30550 9519c2af1049d4a5eb449abe7ab828d6 83 Gene3D G3DSA:2.30.170.50 1 83 1.7E-21 T 14-10-2018 AMIS_30550 9519c2af1049d4a5eb449abe7ab828d6 83 SUPERFAMILY SSF143800 1 81 2.59E-20 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_30550 9519c2af1049d4a5eb449abe7ab828d6 83 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 81 23.311 T 14-10-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_30550 9519c2af1049d4a5eb449abe7ab828d6 83 PRINTS PR01249 Ribosomal protein L31 signature 45 60 1.9E-15 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_30550 9519c2af1049d4a5eb449abe7ab828d6 83 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.9E-15 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_30550 9519c2af1049d4a5eb449abe7ab828d6 83 PRINTS PR01249 Ribosomal protein L31 signature 60 78 1.9E-15 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_30550 9519c2af1049d4a5eb449abe7ab828d6 83 Pfam PF01197 Ribosomal protein L31 1 79 5.4E-26 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_30550 9519c2af1049d4a5eb449abe7ab828d6 83 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 80 3.2E-17 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_62520 80a984a23805990fb09eceae82077f19 399 SUPERFAMILY SSF51556 46 297 4.4E-51 T 14-10-2018 IPR032466 Metal-dependent hydrolase AMIS_62520 80a984a23805990fb09eceae82077f19 399 SUPERFAMILY SSF51338 5 345 2.08E-13 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMIS_62520 80a984a23805990fb09eceae82077f19 399 Pfam PF01979 Amidohydrolase family 42 317 3.1E-11 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AMIS_62520 80a984a23805990fb09eceae82077f19 399 Gene3D G3DSA:3.20.20.140 46 299 2.4E-103 T 14-10-2018 AMIS_62520 80a984a23805990fb09eceae82077f19 399 Gene3D G3DSA:2.30.40.10 13 344 2.4E-103 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMIS_1720 1947bfff197022f6ebe5149a5b465802 517 SMART SM00331 305 515 9.0E-30 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_1720 1947bfff197022f6ebe5149a5b465802 517 Gene3D G3DSA:3.40.50.12740 10 203 1.5E-37 T 14-10-2018 AMIS_1720 1947bfff197022f6ebe5149a5b465802 517 Pfam PF00072 Response regulator receiver domain 13 124 8.3E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_1720 1947bfff197022f6ebe5149a5b465802 517 SMART SM00448 11 125 3.5E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_1720 1947bfff197022f6ebe5149a5b465802 517 SUPERFAMILY SSF52172 11 156 5.12E-34 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_1720 1947bfff197022f6ebe5149a5b465802 517 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 335 515 1.5E-44 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_1720 1947bfff197022f6ebe5149a5b465802 517 Gene3D G3DSA:3.60.40.10 300 516 6.1E-62 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_1720 1947bfff197022f6ebe5149a5b465802 517 SUPERFAMILY SSF81606 318 514 1.31E-11 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_42410 419032c5d8ee453efc4ee43bd547b664 378 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 151 166 9.5E-12 T 14-10-2018 AMIS_42410 419032c5d8ee453efc4ee43bd547b664 378 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 3 25 9.5E-12 T 14-10-2018 AMIS_42410 419032c5d8ee453efc4ee43bd547b664 378 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 272 287 9.5E-12 T 14-10-2018 AMIS_42410 419032c5d8ee453efc4ee43bd547b664 378 SUPERFAMILY SSF51905 3 361 4.74E-53 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_42410 419032c5d8ee453efc4ee43bd547b664 378 Gene3D G3DSA:3.30.9.50 39 262 1.4E-63 T 14-10-2018 AMIS_42410 419032c5d8ee453efc4ee43bd547b664 378 Pfam PF01494 FAD binding domain 5 167 8.5E-14 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 AMIS_42410 419032c5d8ee453efc4ee43bd547b664 378 Gene3D G3DSA:3.50.50.60 6 332 1.4E-63 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_54450 fb9f660aff664ef2745bcd4008a33634 160 SMART SM00448 38 150 8.3E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_54450 fb9f660aff664ef2745bcd4008a33634 160 Gene3D G3DSA:3.40.50.12740 38 159 1.9E-36 T 14-10-2018 AMIS_54450 fb9f660aff664ef2745bcd4008a33634 160 SUPERFAMILY SSF52172 39 155 3.27E-34 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_54450 fb9f660aff664ef2745bcd4008a33634 160 Pfam PF00072 Response regulator receiver domain 40 150 3.7E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_63130 0d44ec583e305fb630af005b78426c70 95 Pfam PF14542 GCN5-related N-acetyl-transferase 14 91 7.0E-24 T 14-10-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase AMIS_63130 0d44ec583e305fb630af005b78426c70 95 SUPERFAMILY SSF55729 4 92 1.13E-24 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_63130 0d44ec583e305fb630af005b78426c70 95 Gene3D G3DSA:3.40.630.30 4 94 2.5E-24 T 14-10-2018 AMIS_49690 c6cec6f779e08b61b89929a1097e2f58 67 Gene3D G3DSA:3.90.820.10 1 66 1.6E-27 T 14-10-2018 AMIS_49690 c6cec6f779e08b61b89929a1097e2f58 67 Pfam PF03621 MbtH-like protein 3 48 7.7E-19 T 14-10-2018 IPR005153 MbtH-like domain AMIS_49690 c6cec6f779e08b61b89929a1097e2f58 67 SUPERFAMILY SSF160582 3 63 5.89E-23 T 14-10-2018 IPR038020 MbtH-like domain superfamily AMIS_49690 c6cec6f779e08b61b89929a1097e2f58 67 SMART SM00923 1 48 6.4E-16 T 14-10-2018 IPR005153 MbtH-like domain AMIS_59280 53945c0c26f12feca277178e45f26d71 285 Gene3D G3DSA:2.130.10.10 1 285 7.3E-50 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_59280 53945c0c26f12feca277178e45f26d71 285 SUPERFAMILY SSF101898 48 274 2.33E-20 T 14-10-2018 AMIS_11300 b8d1e1f8c66d038632f5f1c5094525e1 442 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 142 157 - T 14-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 AMIS_11300 b8d1e1f8c66d038632f5f1c5094525e1 442 Pfam PF02875 Mur ligase family, glutamate ligase domain 300 375 2.0E-10 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 AMIS_11300 b8d1e1f8c66d038632f5f1c5094525e1 442 Pfam PF08245 Mur ligase middle domain 47 273 2.9E-14 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AMIS_11300 b8d1e1f8c66d038632f5f1c5094525e1 442 Gene3D G3DSA:3.40.1190.10 5 300 1.4E-96 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AMIS_11300 b8d1e1f8c66d038632f5f1c5094525e1 442 SUPERFAMILY SSF53244 301 441 9.16E-27 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AMIS_11300 b8d1e1f8c66d038632f5f1c5094525e1 442 Gene3D G3DSA:3.90.190.20 301 442 2.9E-36 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AMIS_11300 b8d1e1f8c66d038632f5f1c5094525e1 442 TIGRFAM TIGR01499 folC: bifunctional protein FolC 25 440 2.0E-107 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 AMIS_11300 b8d1e1f8c66d038632f5f1c5094525e1 442 SUPERFAMILY SSF53623 13 297 8.24E-88 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AMIS_11300 b8d1e1f8c66d038632f5f1c5094525e1 442 PIRSF PIRSF001563 1 442 2.1E-118 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 AMIS_35010 a5ecfa4a12551f024389c6b217724856 257 Pfam PF01614 Bacterial transcriptional regulator 127 249 2.4E-14 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal AMIS_35010 a5ecfa4a12551f024389c6b217724856 257 SUPERFAMILY SSF55781 70 252 5.69E-37 T 14-10-2018 AMIS_35010 a5ecfa4a12551f024389c6b217724856 257 SMART SM00346 4 95 5.9E-13 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AMIS_35010 a5ecfa4a12551f024389c6b217724856 257 Gene3D G3DSA:3.30.450.40 79 255 4.6E-39 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_35010 a5ecfa4a12551f024389c6b217724856 257 SUPERFAMILY SSF46785 7 79 9.58E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_35010 a5ecfa4a12551f024389c6b217724856 257 Gene3D G3DSA:1.10.10.10 4 67 1.5E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_35010 a5ecfa4a12551f024389c6b217724856 257 Pfam PF09339 IclR helix-turn-helix domain 7 57 5.7E-11 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AMIS_64190 baf45e00d6fcad739fba9ccd474f0aca 152 Pfam PF01047 MarR family 35 91 3.2E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_64190 baf45e00d6fcad739fba9ccd474f0aca 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 50 66 2.8E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_64190 baf45e00d6fcad739fba9ccd474f0aca 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 102 2.8E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_64190 baf45e00d6fcad739fba9ccd474f0aca 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 67 82 2.8E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_64190 baf45e00d6fcad739fba9ccd474f0aca 152 SMART SM00347 26 126 4.5E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_64190 baf45e00d6fcad739fba9ccd474f0aca 152 ProSitePatterns PS01117 MarR-type HTH domain signature. 65 99 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site AMIS_64190 baf45e00d6fcad739fba9ccd474f0aca 152 SUPERFAMILY SSF46785 26 140 4.26E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_64190 baf45e00d6fcad739fba9ccd474f0aca 152 Gene3D G3DSA:1.10.10.10 1 140 2.3E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_9200 5dc22da3d5702f1eb0247b95a65685f1 281 SUPERFAMILY SSF56747 3 186 2.55E-24 T 14-10-2018 AMIS_9200 5dc22da3d5702f1eb0247b95a65685f1 281 SMART SM00943 6 175 2.0E-48 T 14-10-2018 IPR015330 DNA primase/polymerase, bifunctional, N-terminal AMIS_9200 5dc22da3d5702f1eb0247b95a65685f1 281 Pfam PF09250 Bifunctional DNA primase/polymerase, N-terminal 6 165 4.6E-38 T 14-10-2018 IPR015330 DNA primase/polymerase, bifunctional, N-terminal AMIS_23170 104051aa38fcacdfd29a8bf29f153103 159 Pfam PF00582 Universal stress protein family 5 140 2.4E-25 T 14-10-2018 IPR006016 UspA AMIS_23170 104051aa38fcacdfd29a8bf29f153103 159 PRINTS PR01438 Universal stress protein signature 3 21 8.0E-13 T 14-10-2018 IPR006015 Universal stress protein A AMIS_23170 104051aa38fcacdfd29a8bf29f153103 159 PRINTS PR01438 Universal stress protein signature 119 141 8.0E-13 T 14-10-2018 IPR006015 Universal stress protein A AMIS_23170 104051aa38fcacdfd29a8bf29f153103 159 PRINTS PR01438 Universal stress protein signature 101 113 8.0E-13 T 14-10-2018 IPR006015 Universal stress protein A AMIS_23170 104051aa38fcacdfd29a8bf29f153103 159 Gene3D G3DSA:3.40.50.620 1 147 2.2E-36 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMIS_23170 104051aa38fcacdfd29a8bf29f153103 159 SUPERFAMILY SSF52402 5 141 1.51E-29 T 14-10-2018 AMIS_17660 69839e18c8d51f972c2c2e0005d247c0 673 Gene3D G3DSA:3.30.565.10 498 652 3.8E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_17660 69839e18c8d51f972c2c2e0005d247c0 673 SMART SM00388 435 500 3.6E-6 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_17660 69839e18c8d51f972c2c2e0005d247c0 673 SUPERFAMILY SSF55785 294 427 4.0E-8 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_17660 69839e18c8d51f972c2c2e0005d247c0 673 Pfam PF05231 MASE1 12 286 1.2E-8 T 14-10-2018 IPR007895 MASE1 AMIS_17660 69839e18c8d51f972c2c2e0005d247c0 673 Gene3D G3DSA:1.10.287.130 439 497 3.8E-35 T 14-10-2018 AMIS_17660 69839e18c8d51f972c2c2e0005d247c0 673 PRINTS PR00344 Bacterial sensor protein C-terminal signature 614 632 5.0E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_17660 69839e18c8d51f972c2c2e0005d247c0 673 PRINTS PR00344 Bacterial sensor protein C-terminal signature 584 598 5.0E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_17660 69839e18c8d51f972c2c2e0005d247c0 673 PRINTS PR00344 Bacterial sensor protein C-terminal signature 639 652 5.0E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_17660 69839e18c8d51f972c2c2e0005d247c0 673 SUPERFAMILY SSF55874 497 653 5.37E-24 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_17660 69839e18c8d51f972c2c2e0005d247c0 673 SUPERFAMILY SSF47384 424 501 7.65E-10 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_17660 69839e18c8d51f972c2c2e0005d247c0 673 Gene3D G3DSA:3.30.450.20 295 438 1.4E-10 T 14-10-2018 AMIS_17660 69839e18c8d51f972c2c2e0005d247c0 673 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 545 653 1.0E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_17660 69839e18c8d51f972c2c2e0005d247c0 673 SMART SM00387 544 655 1.1E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_17660 69839e18c8d51f972c2c2e0005d247c0 673 Pfam PF00512 His Kinase A (phospho-acceptor) domain 439 495 3.8E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_29710 6b3e4a5756e3319361ba259af10fbaff 167 PRINTS PR00502 NUDIX hydrolase family signature 54 69 1.4E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AMIS_29710 6b3e4a5756e3319361ba259af10fbaff 167 PRINTS PR00502 NUDIX hydrolase family signature 40 54 1.4E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AMIS_29710 6b3e4a5756e3319361ba259af10fbaff 167 Pfam PF00293 NUDIX domain 5 132 7.1E-15 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMIS_29710 6b3e4a5756e3319361ba259af10fbaff 167 ProSitePatterns PS00893 Nudix box signature. 45 66 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMIS_29710 6b3e4a5756e3319361ba259af10fbaff 167 SUPERFAMILY SSF55811 3 135 3.93E-21 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMIS_29710 6b3e4a5756e3319361ba259af10fbaff 167 Gene3D G3DSA:3.90.79.10 4 140 2.9E-22 T 14-10-2018 AMIS_72530 f6c72298daa4b8db117af7dba22e185b 397 Pfam PF00704 Glycosyl hydrolases family 18 153 297 4.5E-7 T 14-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 AMIS_72530 f6c72298daa4b8db117af7dba22e185b 397 SMART SM00495 35 81 1.5E-10 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AMIS_72530 f6c72298daa4b8db117af7dba22e185b 397 SUPERFAMILY SSF51055 23 84 1.33E-12 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AMIS_72530 f6c72298daa4b8db117af7dba22e185b 397 SUPERFAMILY SSF51445 98 372 2.93E-17 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_72530 f6c72298daa4b8db117af7dba22e185b 397 Gene3D G3DSA:3.20.20.80 105 397 2.3E-77 T 14-10-2018 AMIS_72530 f6c72298daa4b8db117af7dba22e185b 397 Gene3D G3DSA:2.10.10.20 32 85 1.0E-15 T 14-10-2018 AMIS_11760 19477fab015a642980af66180955d270 244 Gene3D G3DSA:3.40.1280.10 72 244 2.4E-54 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMIS_11760 19477fab015a642980af66180955d270 244 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 13 241 1.6E-38 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 AMIS_11760 19477fab015a642980af66180955d270 244 SUPERFAMILY SSF88697 5 68 6.96E-13 T 14-10-2018 IPR015947 PUA-like superfamily AMIS_11760 19477fab015a642980af66180955d270 244 SUPERFAMILY SSF75217 75 244 5.67E-42 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases AMIS_11760 19477fab015a642980af66180955d270 244 Pfam PF04452 RNA methyltransferase 18 238 2.6E-60 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 AMIS_11760 19477fab015a642980af66180955d270 244 PIRSF PIRSF015601 2 244 5.8E-48 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 AMIS_11760 19477fab015a642980af66180955d270 244 Gene3D G3DSA:2.40.240.20 1 70 5.9E-22 T 14-10-2018 AMIS_17040 2f220ef215206ac0d19a8cfa82c7f975 225 SMART SM00448 2 117 2.8E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_17040 2f220ef215206ac0d19a8cfa82c7f975 225 Pfam PF00072 Response regulator receiver domain 4 117 3.3E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_17040 2f220ef215206ac0d19a8cfa82c7f975 225 SUPERFAMILY SSF46894 150 219 2.52E-22 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_17040 2f220ef215206ac0d19a8cfa82c7f975 225 Pfam PF00196 Bacterial regulatory proteins, luxR family 157 212 1.9E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_17040 2f220ef215206ac0d19a8cfa82c7f975 225 SUPERFAMILY SSF52172 3 135 1.85E-33 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_17040 2f220ef215206ac0d19a8cfa82c7f975 225 Gene3D G3DSA:3.40.50.12740 2 218 6.3E-69 T 14-10-2018 AMIS_17040 2f220ef215206ac0d19a8cfa82c7f975 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 158 172 1.4E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_17040 2f220ef215206ac0d19a8cfa82c7f975 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 188 1.4E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_17040 2f220ef215206ac0d19a8cfa82c7f975 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 188 200 1.4E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_17040 2f220ef215206ac0d19a8cfa82c7f975 225 SMART SM00421 155 212 1.6E-23 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_42520 cd6e431375d805bfe77dc546cd696cb3 118 SUPERFAMILY SSF54593 2 116 9.76E-17 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_42520 cd6e431375d805bfe77dc546cd696cb3 118 Gene3D G3DSA:3.10.180.10 3 115 6.0E-25 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_76720 d4199709e3d721908443c6b9f9a58359 346 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 218 282 2.5E-20 T 14-10-2018 IPR017703 YgfZ/GcvT conserved site AMIS_76720 d4199709e3d721908443c6b9f9a58359 346 PIRSF PIRSF006487 12 342 2.1E-17 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 AMIS_76720 d4199709e3d721908443c6b9f9a58359 346 Gene3D G3DSA:3.30.1360.120 16 344 2.9E-64 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 AMIS_76720 d4199709e3d721908443c6b9f9a58359 346 Pfam PF01571 Aminomethyltransferase folate-binding domain 17 246 1.0E-28 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain AMIS_76720 d4199709e3d721908443c6b9f9a58359 346 SUPERFAMILY SSF103025 18 271 8.48E-54 T 14-10-2018 AMIS_76720 d4199709e3d721908443c6b9f9a58359 346 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 256 335 8.5E-9 T 14-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AMIS_60520 acd1c284e0561c448f631ae683f3cf83 423 ProSitePatterns PS00132 Zinc carboxypeptidases, zinc-binding region 1 signature. 156 178 - T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 AMIS_60520 acd1c284e0561c448f631ae683f3cf83 423 SMART SM00631 105 396 1.7E-93 T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 AMIS_60520 acd1c284e0561c448f631ae683f3cf83 423 Pfam PF00246 Zinc carboxypeptidase 114 399 1.1E-68 T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 AMIS_60520 acd1c284e0561c448f631ae683f3cf83 423 ProSitePatterns PS00133 Zinc carboxypeptidases, zinc-binding region 2 signature. 300 310 - T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 AMIS_60520 acd1c284e0561c448f631ae683f3cf83 423 Gene3D G3DSA:3.40.630.10 98 423 2.7E-110 T 14-10-2018 AMIS_60520 acd1c284e0561c448f631ae683f3cf83 423 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 297 310 7.2E-13 T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 AMIS_60520 acd1c284e0561c448f631ae683f3cf83 423 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 238 246 7.2E-13 T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 AMIS_60520 acd1c284e0561c448f631ae683f3cf83 423 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 156 170 7.2E-13 T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 AMIS_60520 acd1c284e0561c448f631ae683f3cf83 423 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 131 143 7.2E-13 T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 AMIS_60520 acd1c284e0561c448f631ae683f3cf83 423 SUPERFAMILY SSF53187 103 409 1.46E-84 T 14-10-2018 AMIS_7570 f528c7a05e3dce1cebdbeeffd3e0eebd 427 Hamap MF_00318 Enolase [eno]. 2 409 45.242 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMIS_7570 f528c7a05e3dce1cebdbeeffd3e0eebd 427 SUPERFAMILY SSF51604 139 423 1.83E-126 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AMIS_7570 f528c7a05e3dce1cebdbeeffd3e0eebd 427 Pfam PF03952 Enolase, N-terminal domain 4 134 1.1E-58 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMIS_7570 f528c7a05e3dce1cebdbeeffd3e0eebd 427 Gene3D G3DSA:3.30.390.10 1 126 4.8E-55 T 14-10-2018 IPR029017 Enolase-like, N-terminal AMIS_7570 f528c7a05e3dce1cebdbeeffd3e0eebd 427 Gene3D G3DSA:3.20.20.120 128 424 5.3E-133 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AMIS_7570 f528c7a05e3dce1cebdbeeffd3e0eebd 427 SMART SM01193 4 134 4.8E-91 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMIS_7570 f528c7a05e3dce1cebdbeeffd3e0eebd 427 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 422 1.3E-202 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMIS_7570 f528c7a05e3dce1cebdbeeffd3e0eebd 427 SMART SM01192 139 423 8.1E-214 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMIS_7570 f528c7a05e3dce1cebdbeeffd3e0eebd 427 Pfam PF00113 Enolase, C-terminal TIM barrel domain 140 419 4.6E-128 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMIS_7570 f528c7a05e3dce1cebdbeeffd3e0eebd 427 SUPERFAMILY SSF54826 3 138 4.71E-55 T 14-10-2018 AMIS_7570 f528c7a05e3dce1cebdbeeffd3e0eebd 427 ProSitePatterns PS00164 Enolase signature. 332 345 - T 14-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_7570 f528c7a05e3dce1cebdbeeffd3e0eebd 427 PRINTS PR00148 Enolase signature 309 320 8.4E-49 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMIS_7570 f528c7a05e3dce1cebdbeeffd3e0eebd 427 PRINTS PR00148 Enolase signature 332 346 8.4E-49 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMIS_7570 f528c7a05e3dce1cebdbeeffd3e0eebd 427 PRINTS PR00148 Enolase signature 361 378 8.4E-49 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMIS_7570 f528c7a05e3dce1cebdbeeffd3e0eebd 427 PRINTS PR00148 Enolase signature 37 51 8.4E-49 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMIS_7570 f528c7a05e3dce1cebdbeeffd3e0eebd 427 PRINTS PR00148 Enolase signature 161 174 8.4E-49 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMIS_7570 f528c7a05e3dce1cebdbeeffd3e0eebd 427 PRINTS PR00148 Enolase signature 107 123 8.4E-49 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMIS_7570 f528c7a05e3dce1cebdbeeffd3e0eebd 427 PIRSF PIRSF001400 1 422 3.8E-190 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMIS_45960 7a0d1dc29a96eb110901bd0b5986d3e4 431 Gene3D G3DSA:3.80.30.20 3 325 6.9E-67 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe AMIS_45960 7a0d1dc29a96eb110901bd0b5986d3e4 431 Pfam PF04055 Radical SAM superfamily 43 212 2.2E-16 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMIS_45960 7a0d1dc29a96eb110901bd0b5986d3e4 431 SUPERFAMILY SSF102114 4 416 3.79E-73 T 14-10-2018 AMIS_45960 7a0d1dc29a96eb110901bd0b5986d3e4 431 SMART SM00729 38 256 1.9E-35 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AMIS_14590 bb7dc805748b2911aa8fa1974e216231 270 Gene3D G3DSA:3.40.50.720 1 163 6.1E-46 T 14-10-2018 AMIS_14590 bb7dc805748b2911aa8fa1974e216231 270 PIRSF PIRSF000193 3 268 1.4E-73 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AMIS_14590 bb7dc805748b2911aa8fa1974e216231 270 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 5 98 2.6E-19 T 14-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal AMIS_14590 bb7dc805748b2911aa8fa1974e216231 270 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 161 265 4.6E-39 T 14-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AMIS_14590 bb7dc805748b2911aa8fa1974e216231 270 SUPERFAMILY SSF51735 5 159 8.97E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_14590 bb7dc805748b2911aa8fa1974e216231 270 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 221 243 - T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AMIS_14590 bb7dc805748b2911aa8fa1974e216231 270 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 265 26.698 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AMIS_14590 bb7dc805748b2911aa8fa1974e216231 270 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 265 2.9E-78 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AMIS_14590 bb7dc805748b2911aa8fa1974e216231 270 SUPERFAMILY SSF48179 160 267 9.18E-37 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMIS_14590 bb7dc805748b2911aa8fa1974e216231 270 Gene3D G3DSA:1.10.3730.10 164 269 2.1E-41 T 14-10-2018 AMIS_45850 09f6f0d2c32d6d85dba10c52384dd21e 162 Gene3D G3DSA:3.40.630.30 1 162 6.0E-20 T 14-10-2018 AMIS_45850 09f6f0d2c32d6d85dba10c52384dd21e 162 SUPERFAMILY SSF55729 36 159 1.78E-18 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_45850 09f6f0d2c32d6d85dba10c52384dd21e 162 Pfam PF00583 Acetyltransferase (GNAT) family 56 154 8.8E-10 T 14-10-2018 IPR000182 GNAT domain AMIS_55550 692d7edaa3b09600947dc23c052b5e52 148 Gene3D G3DSA:3.30.530.20 4 148 6.5E-32 T 14-10-2018 IPR023393 START-like domain superfamily AMIS_55550 692d7edaa3b09600947dc23c052b5e52 148 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 14 139 3.5E-15 T 14-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like AMIS_55550 692d7edaa3b09600947dc23c052b5e52 148 SUPERFAMILY SSF55961 4 143 3.52E-28 T 14-10-2018 AMIS_49570 2cee4bbbb8e7a69579c828468c260d2e 222 SUPERFAMILY SSF48498 95 200 1.49E-14 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_49570 2cee4bbbb8e7a69579c828468c260d2e 222 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 51 74 2.1E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_49570 2cee4bbbb8e7a69579c828468c260d2e 222 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 44 2.1E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_49570 2cee4bbbb8e7a69579c828468c260d2e 222 Pfam PF00440 Bacterial regulatory proteins, tetR family 31 76 9.2E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_49570 2cee4bbbb8e7a69579c828468c260d2e 222 Gene3D G3DSA:1.10.357.10 12 205 4.0E-45 T 14-10-2018 AMIS_49570 2cee4bbbb8e7a69579c828468c260d2e 222 SUPERFAMILY SSF46689 19 96 2.79E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_42090 b872b34e043c11fb6c63823380d7a12f 379 Gene3D G3DSA:2.40.110.10 120 231 3.9E-41 T 14-10-2018 AMIS_42090 b872b34e043c11fb6c63823380d7a12f 379 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 215 1.7E-23 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMIS_42090 b872b34e043c11fb6c63823380d7a12f 379 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 373 2.8E-40 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMIS_42090 b872b34e043c11fb6c63823380d7a12f 379 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 334 353 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AMIS_42090 b872b34e043c11fb6c63823380d7a12f 379 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 4 117 3.5E-17 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMIS_42090 b872b34e043c11fb6c63823380d7a12f 379 SUPERFAMILY SSF47203 226 374 7.25E-43 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMIS_42090 b872b34e043c11fb6c63823380d7a12f 379 Gene3D G3DSA:1.10.540.10 2 119 1.9E-26 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMIS_42090 b872b34e043c11fb6c63823380d7a12f 379 Gene3D G3DSA:1.20.140.10 232 376 2.8E-43 T 14-10-2018 AMIS_42090 b872b34e043c11fb6c63823380d7a12f 379 SUPERFAMILY SSF56645 4 235 6.54E-68 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMIS_49490 f357ad2cc9bba7558ae77e5a2acc8173 577 Pfam PF00005 ABC transporter 358 505 2.7E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_49490 f357ad2cc9bba7558ae77e5a2acc8173 577 SUPERFAMILY SSF52540 337 537 2.43E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_49490 f357ad2cc9bba7558ae77e5a2acc8173 577 Gene3D G3DSA:1.20.1560.10 9 319 7.7E-29 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMIS_49490 f357ad2cc9bba7558ae77e5a2acc8173 577 Pfam PF00664 ABC transporter transmembrane region 55 283 9.1E-9 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AMIS_49490 f357ad2cc9bba7558ae77e5a2acc8173 577 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 11 535 4.8E-177 T 14-10-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0016021|GO:0034775|GO:0042626|GO:0045454 AMIS_49490 f357ad2cc9bba7558ae77e5a2acc8173 577 SUPERFAMILY SSF90123 11 321 2.35E-38 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMIS_49490 f357ad2cc9bba7558ae77e5a2acc8173 577 ProSitePatterns PS00211 ABC transporters family signature. 478 492 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_49490 f357ad2cc9bba7558ae77e5a2acc8173 577 Gene3D G3DSA:3.40.50.300 337 545 2.4E-64 T 14-10-2018 AMIS_49490 f357ad2cc9bba7558ae77e5a2acc8173 577 SMART SM00382 366 573 3.0E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_34360 b5537ba002cc9160062c1ee9efa86d2d 433 SUPERFAMILY SSF103473 43 428 1.44E-30 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_34360 b5537ba002cc9160062c1ee9efa86d2d 433 Pfam PF07690 Major Facilitator Superfamily 51 375 1.4E-15 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_34360 b5537ba002cc9160062c1ee9efa86d2d 433 Gene3D G3DSA:1.20.1250.20 42 424 9.5E-23 T 14-10-2018 AMIS_4700 cd6c08f0e9dc2a819dbd42ce0de47da3 299 Gene3D G3DSA:3.40.50.720 10 204 5.9E-55 T 14-10-2018 AMIS_4700 cd6c08f0e9dc2a819dbd42ce0de47da3 299 Gene3D G3DSA:3.90.25.10 148 264 5.9E-55 T 14-10-2018 AMIS_4700 cd6c08f0e9dc2a819dbd42ce0de47da3 299 Pfam PF13460 NAD(P)H-binding 12 153 2.9E-17 T 14-10-2018 IPR016040 NAD(P)-binding domain AMIS_4700 cd6c08f0e9dc2a819dbd42ce0de47da3 299 SUPERFAMILY SSF51735 7 253 9.19E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_79010 59480e8f135c6b2f41ac3894c8e87947 439 Gene3D G3DSA:1.10.287.130 173 279 4.1E-18 T 14-10-2018 AMIS_79010 59480e8f135c6b2f41ac3894c8e87947 439 Gene3D G3DSA:3.30.565.10 284 422 1.6E-11 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_79010 59480e8f135c6b2f41ac3894c8e87947 439 SUPERFAMILY SSF55874 286 420 3.01E-14 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_79010 59480e8f135c6b2f41ac3894c8e87947 439 SMART SM00388 222 280 0.0016 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_79010 59480e8f135c6b2f41ac3894c8e87947 439 SMART SM00304 169 221 6.0E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_79010 59480e8f135c6b2f41ac3894c8e87947 439 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 333 420 1.8E-5 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_79010 59480e8f135c6b2f41ac3894c8e87947 439 Pfam PF00672 HAMP domain 171 218 3.5E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_79010 59480e8f135c6b2f41ac3894c8e87947 439 SMART SM00387 325 424 2.8E-5 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_79010 59480e8f135c6b2f41ac3894c8e87947 439 SUPERFAMILY SSF47384 207 269 4.32E-8 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_60400 5fd8bec80fa48c4745643d287fb7b491 394 Gene3D G3DSA:1.20.1250.20 201 382 2.5E-14 T 14-10-2018 AMIS_60400 5fd8bec80fa48c4745643d287fb7b491 394 Pfam PF07690 Major Facilitator Superfamily 12 320 1.9E-31 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_60400 5fd8bec80fa48c4745643d287fb7b491 394 SUPERFAMILY SSF103473 5 383 1.57E-51 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_60400 5fd8bec80fa48c4745643d287fb7b491 394 Gene3D G3DSA:1.20.1250.20 2 191 7.5E-26 T 14-10-2018 AMIS_53730 135ad44f48fb5005c8c8ad831d865f98 325 Gene3D G3DSA:3.20.20.100 1 324 3.7E-114 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMIS_53730 135ad44f48fb5005c8c8ad831d865f98 325 Pfam PF00248 Aldo/keto reductase family 14 309 2.3E-73 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain AMIS_53730 135ad44f48fb5005c8c8ad831d865f98 325 SUPERFAMILY SSF51430 6 311 1.83E-97 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMIS_5050 f89b634cc97493db2b15ba0fa26c109b 412 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 89 289 2.5E-27 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 AMIS_5050 f89b634cc97493db2b15ba0fa26c109b 412 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 154 171 1.8E-10 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AMIS_5050 f89b634cc97493db2b15ba0fa26c109b 412 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 181 194 1.8E-10 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AMIS_5050 f89b634cc97493db2b15ba0fa26c109b 412 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 94 105 1.8E-10 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AMIS_5050 f89b634cc97493db2b15ba0fa26c109b 412 SUPERFAMILY SSF56601 20 307 4.55E-37 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMIS_5050 f89b634cc97493db2b15ba0fa26c109b 412 Gene3D G3DSA:3.40.710.10 80 342 4.5E-54 T 14-10-2018 AMIS_37900 7da62f9da40a3f4127e20c087e70ae38 335 TIGRFAM TIGR03617 F420_MSMEG_2256: probable F420-dependent oxidoreductase, MSMEG_2256 family 22 334 5.2E-128 T 14-10-2018 IPR019919 Luciferase-like, F420-dependent oxidoreductase, MSMEG2256, predicted AMIS_37900 7da62f9da40a3f4127e20c087e70ae38 335 SUPERFAMILY SSF51679 9 323 1.22E-53 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_37900 7da62f9da40a3f4127e20c087e70ae38 335 Gene3D G3DSA:3.20.20.30 7 333 1.1E-61 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_37900 7da62f9da40a3f4127e20c087e70ae38 335 Pfam PF00296 Luciferase-like monooxygenase 12 311 2.2E-55 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMIS_46650 a6281f3ded491eda88e45fe0a3997d20 1014 SUPERFAMILY SSF49785 873 1011 7.8E-31 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_46650 a6281f3ded491eda88e45fe0a3997d20 1014 SUPERFAMILY SSF49299 433 537 1.29E-14 T 14-10-2018 IPR035986 PKD domain superfamily AMIS_46650 a6281f3ded491eda88e45fe0a3997d20 1014 Pfam PF07995 Glucose / Sorbosone dehydrogenase 220 432 1.9E-15 T 14-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase AMIS_46650 a6281f3ded491eda88e45fe0a3997d20 1014 Pfam PF07995 Glucose / Sorbosone dehydrogenase 25 181 5.8E-18 T 14-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase AMIS_46650 a6281f3ded491eda88e45fe0a3997d20 1014 Gene3D G3DSA:2.120.10.30 6 444 7.6E-71 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AMIS_46650 a6281f3ded491eda88e45fe0a3997d20 1014 Gene3D G3DSA:2.60.120.260 725 867 1.1E-41 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_46650 a6281f3ded491eda88e45fe0a3997d20 1014 Pfam PF00754 F5/8 type C domain 884 1009 2.7E-19 T 14-10-2018 IPR000421 Coagulation factor 5/8 C-terminal domain AMIS_46650 a6281f3ded491eda88e45fe0a3997d20 1014 Pfam PF00754 F5/8 type C domain 743 863 5.0E-23 T 14-10-2018 IPR000421 Coagulation factor 5/8 C-terminal domain AMIS_46650 a6281f3ded491eda88e45fe0a3997d20 1014 Gene3D G3DSA:2.60.40.10 445 539 4.6E-19 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_46650 a6281f3ded491eda88e45fe0a3997d20 1014 SUPERFAMILY SSF50952 6 312 4.58E-27 T 14-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 AMIS_46650 a6281f3ded491eda88e45fe0a3997d20 1014 Pfam PF00801 PKD domain 456 528 4.7E-6 T 14-10-2018 IPR000601 PKD domain AMIS_46650 a6281f3ded491eda88e45fe0a3997d20 1014 SUPERFAMILY SSF49785 738 865 6.45E-34 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_46650 a6281f3ded491eda88e45fe0a3997d20 1014 Gene3D G3DSA:2.60.120.260 872 1013 1.2E-37 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_46650 a6281f3ded491eda88e45fe0a3997d20 1014 SMART SM00089 452 539 1.9E-11 T 14-10-2018 IPR022409 PKD/Chitinase domain AMIS_18960 c871ee1b734bda4d55e9ccfa8a1a1584 131 SUPERFAMILY SSF54593 9 125 1.83E-11 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_18960 c871ee1b734bda4d55e9ccfa8a1a1584 131 Gene3D G3DSA:3.10.180.10 3 130 1.3E-27 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_15680 c8d1cf2a73110419de46dd42e472c75d 371 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 7 267 1.9E-43 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 AMIS_15680 c8d1cf2a73110419de46dd42e472c75d 371 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 8 274 15.374 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 AMIS_15680 c8d1cf2a73110419de46dd42e472c75d 371 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 140 152 - T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 AMIS_15680 c8d1cf2a73110419de46dd42e472c75d 371 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 268 5.0E-63 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 AMIS_66680 4c1630c449814105c25aef07a60f8e7c 270 Pfam PF00899 ThiF family 119 162 2.3E-5 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AMIS_66680 4c1630c449814105c25aef07a60f8e7c 270 SUPERFAMILY SSF51735 101 262 5.71E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_66680 4c1630c449814105c25aef07a60f8e7c 270 Gene3D G3DSA:3.40.50.720 99 232 5.3E-76 T 14-10-2018 AMIS_66680 4c1630c449814105c25aef07a60f8e7c 270 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 3 265 27.228 T 14-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AMIS_66680 4c1630c449814105c25aef07a60f8e7c 270 Gene3D G3DSA:3.40.50.10860 8 254 5.3E-76 T 14-10-2018 AMIS_66680 4c1630c449814105c25aef07a60f8e7c 270 SUPERFAMILY SSF53223 5 100 6.33E-28 T 14-10-2018 AMIS_66680 4c1630c449814105c25aef07a60f8e7c 270 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 8 88 3.4E-24 T 14-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AMIS_60340 53e9700ea04299c19bf3dd85882fd4d4 414 Gene3D G3DSA:1.20.1250.20 6 194 1.3E-12 T 14-10-2018 AMIS_60340 53e9700ea04299c19bf3dd85882fd4d4 414 Pfam PF07690 Major Facilitator Superfamily 29 333 6.1E-12 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_60340 53e9700ea04299c19bf3dd85882fd4d4 414 SUPERFAMILY SSF103473 7 403 5.1E-32 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_60340 53e9700ea04299c19bf3dd85882fd4d4 414 Gene3D G3DSA:1.20.1250.20 212 400 2.5E-13 T 14-10-2018 AMIS_11490 68e5bcd32a78ffd6f10008b1f2bc52e3 834 Pfam PF01433 Peptidase family M1 domain 202 438 4.1E-57 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMIS_11490 68e5bcd32a78ffd6f10008b1f2bc52e3 834 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 308 320 3.0E-21 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMIS_11490 68e5bcd32a78ffd6f10008b1f2bc52e3 834 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 289 304 3.0E-21 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMIS_11490 68e5bcd32a78ffd6f10008b1f2bc52e3 834 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 174 189 3.0E-21 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMIS_11490 68e5bcd32a78ffd6f10008b1f2bc52e3 834 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 255 265 3.0E-21 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMIS_11490 68e5bcd32a78ffd6f10008b1f2bc52e3 834 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 131 146 3.0E-21 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMIS_11490 68e5bcd32a78ffd6f10008b1f2bc52e3 834 SUPERFAMILY SSF63737 6 190 3.66E-31 T 14-10-2018 AMIS_11490 68e5bcd32a78ffd6f10008b1f2bc52e3 834 TIGRFAM TIGR02412 pepN_strep_liv: aminopeptidase N 7 833 3.8E-270 T 14-10-2018 IPR012778 Peptidase M1, aminopeptidase GO:0004177|GO:0006508 KEGG: 00480+3.4.11.2 AMIS_11490 68e5bcd32a78ffd6f10008b1f2bc52e3 834 Gene3D G3DSA:1.10.390.60 193 442 2.4E-67 T 14-10-2018 AMIS_11490 68e5bcd32a78ffd6f10008b1f2bc52e3 834 Gene3D G3DSA:2.60.40.1730 19 192 8.1E-17 T 14-10-2018 AMIS_11490 68e5bcd32a78ffd6f10008b1f2bc52e3 834 SUPERFAMILY SSF55486 198 448 1.08E-67 T 14-10-2018 AMIS_11490 68e5bcd32a78ffd6f10008b1f2bc52e3 834 Pfam PF11838 ERAP1-like C-terminal domain 521 828 3.1E-40 T 14-10-2018 IPR024571 ERAP1-like C-terminal domain AMIS_61920 fd95580e879a9709ed93321734d3b807 246 Pfam PF00005 ABC transporter 18 166 2.9E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_61920 fd95580e879a9709ed93321734d3b807 246 SUPERFAMILY SSF52540 3 236 2.47E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_61920 fd95580e879a9709ed93321734d3b807 246 PIRSF PIRSF039085 1 242 8.6E-102 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AMIS_61920 fd95580e879a9709ed93321734d3b807 246 SMART SM00382 27 214 2.9E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_61920 fd95580e879a9709ed93321734d3b807 246 Gene3D G3DSA:3.40.50.300 2 241 2.3E-77 T 14-10-2018 AMIS_61920 fd95580e879a9709ed93321734d3b807 246 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_14850 b9545420e3ae29296842a79220da405f 648 Pfam PF02910 Fumarate reductase flavoprotein C-term 513 647 1.7E-36 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMIS_14850 b9545420e3ae29296842a79220da405f 648 Gene3D G3DSA:3.50.50.60 47 461 2.1E-101 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_14850 b9545420e3ae29296842a79220da405f 648 Pfam PF00890 FAD binding domain 47 452 8.6E-58 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMIS_14850 b9545420e3ae29296842a79220da405f 648 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 416 438 1.4E-5 T 14-10-2018 AMIS_14850 b9545420e3ae29296842a79220da405f 648 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 47 66 1.4E-5 T 14-10-2018 AMIS_14850 b9545420e3ae29296842a79220da405f 648 SUPERFAMILY SSF51905 44 468 7.87E-44 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_14850 b9545420e3ae29296842a79220da405f 648 Gene3D G3DSA:1.20.58.100 485 599 1.0E-23 T 14-10-2018 AMIS_14850 b9545420e3ae29296842a79220da405f 648 Gene3D G3DSA:3.90.700.10 303 427 2.1E-101 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMIS_14850 b9545420e3ae29296842a79220da405f 648 SUPERFAMILY SSF46977 504 647 1.83E-39 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMIS_14850 b9545420e3ae29296842a79220da405f 648 SUPERFAMILY SSF56425 272 414 4.19E-35 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMIS_14850 b9545420e3ae29296842a79220da405f 648 TIGRFAM TIGR01811 sdhA_Bsu: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 47 647 3.3E-303 T 14-10-2018 IPR011280 Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 AMIS_24590 762f1e1d5199345f0a0f95bf2ad70150 638 Pfam PF00005 ABC transporter 344 492 1.9E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_24590 762f1e1d5199345f0a0f95bf2ad70150 638 SMART SM00382 352 550 2.6E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_24590 762f1e1d5199345f0a0f95bf2ad70150 638 SUPERFAMILY SSF161098 67 264 2.88E-19 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_24590 762f1e1d5199345f0a0f95bf2ad70150 638 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 544 608 3.2E-17 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMIS_24590 762f1e1d5199345f0a0f95bf2ad70150 638 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 266 1.5E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_24590 762f1e1d5199345f0a0f95bf2ad70150 638 Gene3D G3DSA:3.40.50.300 321 635 3.9E-93 T 14-10-2018 AMIS_24590 762f1e1d5199345f0a0f95bf2ad70150 638 ProSitePatterns PS00211 ABC transporters family signature. 465 479 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_24590 762f1e1d5199345f0a0f95bf2ad70150 638 Gene3D G3DSA:1.10.3720.10 63 270 8.4E-18 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_24590 762f1e1d5199345f0a0f95bf2ad70150 638 SUPERFAMILY SSF52540 352 619 1.25E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_24590 762f1e1d5199345f0a0f95bf2ad70150 638 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 542 626 1.6E-21 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMIS_75020 0e8da02d3475beee78692b41be866df2 326 Pfam PF14572 Phosphoribosyl synthetase-associated domain 216 322 4.2E-25 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AMIS_75020 0e8da02d3475beee78692b41be866df2 326 Gene3D G3DSA:3.40.50.2020 15 310 1.5E-107 T 14-10-2018 AMIS_75020 0e8da02d3475beee78692b41be866df2 326 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 13 322 1.2E-111 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AMIS_75020 0e8da02d3475beee78692b41be866df2 326 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 12 128 1.3E-41 T 14-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AMIS_75020 0e8da02d3475beee78692b41be866df2 326 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 12 323 44.164 T 14-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 AMIS_75020 0e8da02d3475beee78692b41be866df2 326 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 136 151 - T 14-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 AMIS_75020 0e8da02d3475beee78692b41be866df2 326 Gene3D G3DSA:3.40.50.2020 155 299 1.5E-107 T 14-10-2018 AMIS_75020 0e8da02d3475beee78692b41be866df2 326 SMART SM01400 12 128 5.8E-63 T 14-10-2018 AMIS_75020 0e8da02d3475beee78692b41be866df2 326 SUPERFAMILY SSF53271 77 314 2.14E-59 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like AMIS_50490 88462607c5635995653e34e2fdda023f 381 Gene3D G3DSA:1.10.540.10 2 113 1.6E-21 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMIS_50490 88462607c5635995653e34e2fdda023f 381 Gene3D G3DSA:2.40.110.10 114 205 4.0E-26 T 14-10-2018 AMIS_50490 88462607c5635995653e34e2fdda023f 381 PIRSF PIRSF016578 2 381 1.9E-122 T 14-10-2018 AMIS_50490 88462607c5635995653e34e2fdda023f 381 Gene3D G3DSA:1.20.140.10 215 381 1.1E-32 T 14-10-2018 AMIS_50490 88462607c5635995653e34e2fdda023f 381 SUPERFAMILY SSF56645 12 202 2.49E-31 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMIS_50490 88462607c5635995653e34e2fdda023f 381 SUPERFAMILY SSF47203 235 358 1.56E-14 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMIS_50490 88462607c5635995653e34e2fdda023f 381 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 235 364 1.7E-31 T 14-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain AMIS_18030 e6fbdfdc9e39a363929a88ff165683fe 259 PIRSF PIRSF028756 1 250 4.2E-94 T 14-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 AMIS_18030 e6fbdfdc9e39a363929a88ff165683fe 259 SUPERFAMILY SSF52540 30 211 5.65E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_18030 e6fbdfdc9e39a363929a88ff165683fe 259 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 6 227 3.5E-96 T 14-10-2018 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 KEGG: 00190+2.7.4.1 AMIS_18030 e6fbdfdc9e39a363929a88ff165683fe 259 Gene3D G3DSA:3.40.50.300 2 246 6.8E-84 T 14-10-2018 AMIS_18030 e6fbdfdc9e39a363929a88ff165683fe 259 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 6 226 3.7E-88 T 14-10-2018 IPR022488 Polyphosphate kinase-2-related AMIS_18880 782e7ff27dac7eba30221043a927b068 1315 PRINTS PR00369 Flavodoxin signature 906 925 2.2E-11 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AMIS_18880 782e7ff27dac7eba30221043a927b068 1315 PRINTS PR00369 Flavodoxin signature 850 861 2.2E-11 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AMIS_18880 782e7ff27dac7eba30221043a927b068 1315 PRINTS PR00369 Flavodoxin signature 882 892 2.2E-11 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AMIS_18880 782e7ff27dac7eba30221043a927b068 1315 PRINTS PR00369 Flavodoxin signature 802 815 2.2E-11 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AMIS_18880 782e7ff27dac7eba30221043a927b068 1315 Gene3D G3DSA:2.40.30.10 952 1155 3.3E-62 T 14-10-2018 AMIS_18880 782e7ff27dac7eba30221043a927b068 1315 Gene3D G3DSA:3.40.50.80 1161 1315 3.1E-56 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMIS_18880 782e7ff27dac7eba30221043a927b068 1315 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 622 649 - T 14-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AMIS_18880 782e7ff27dac7eba30221043a927b068 1315 SUPERFAMILY SSF52343 1160 1315 3.27E-50 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMIS_18880 782e7ff27dac7eba30221043a927b068 1315 SUPERFAMILY SSF63380 951 1162 1.49E-54 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AMIS_18880 782e7ff27dac7eba30221043a927b068 1315 Gene3D G3DSA:2.20.25.90 1 63 3.6E-17 T 14-10-2018 AMIS_18880 782e7ff27dac7eba30221043a927b068 1315 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 988 998 3.5E-26 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMIS_18880 782e7ff27dac7eba30221043a927b068 1315 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 1210 1221 3.5E-26 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMIS_18880 782e7ff27dac7eba30221043a927b068 1315 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 1172 1191 3.5E-26 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMIS_18880 782e7ff27dac7eba30221043a927b068 1315 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 1197 1206 3.5E-26 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMIS_18880 782e7ff27dac7eba30221043a927b068 1315 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 1241 1257 3.5E-26 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMIS_18880 782e7ff27dac7eba30221043a927b068 1315 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 1107 1114 3.5E-26 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMIS_18880 782e7ff27dac7eba30221043a927b068 1315 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 1264 1272 3.5E-26 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMIS_18880 782e7ff27dac7eba30221043a927b068 1315 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 1136 1145 3.5E-26 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMIS_18880 782e7ff27dac7eba30221043a927b068 1315 Pfam PF00667 FAD binding domain 953 1140 3.5E-22 T 14-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 AMIS_18880 782e7ff27dac7eba30221043a927b068 1315 Pfam PF00384 Molybdopterin oxidoreductase 83 485 3.8E-66 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_18880 782e7ff27dac7eba30221043a927b068 1315 Pfam PF01568 Molydopterin dinucleotide binding domain 583 694 1.0E-34 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 AMIS_18880 782e7ff27dac7eba30221043a927b068 1315 Gene3D G3DSA:1.20.990.10 998 1105 3.3E-62 T 14-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 AMIS_18880 782e7ff27dac7eba30221043a927b068 1315 SUPERFAMILY SSF53706 4 585 3.14E-180 T 14-10-2018 AMIS_18880 782e7ff27dac7eba30221043a927b068 1315 Pfam PF00258 Flavodoxin 803 924 3.6E-26 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AMIS_18880 782e7ff27dac7eba30221043a927b068 1315 Gene3D G3DSA:3.40.228.10 142 337 8.7E-183 T 14-10-2018 AMIS_18880 782e7ff27dac7eba30221043a927b068 1315 Pfam PF00175 Oxidoreductase NAD-binding domain 1173 1279 3.2E-15 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AMIS_18880 782e7ff27dac7eba30221043a927b068 1315 SUPERFAMILY SSF50692 555 700 2.06E-48 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily AMIS_18880 782e7ff27dac7eba30221043a927b068 1315 Gene3D G3DSA:3.40.50.360 799 943 4.1E-41 T 14-10-2018 IPR029039 Flavoprotein-like superfamily AMIS_18880 782e7ff27dac7eba30221043a927b068 1315 SMART SM00926 5 59 1.5E-18 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_18880 782e7ff27dac7eba30221043a927b068 1315 Gene3D G3DSA:3.40.50.740 68 535 8.7E-183 T 14-10-2018 AMIS_18880 782e7ff27dac7eba30221043a927b068 1315 SUPERFAMILY SSF52218 801 947 1.35E-41 T 14-10-2018 IPR029039 Flavoprotein-like superfamily AMIS_18880 782e7ff27dac7eba30221043a927b068 1315 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 7 56 7.5E-17 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_18880 782e7ff27dac7eba30221043a927b068 1315 Gene3D G3DSA:2.40.40.20 573 700 4.9E-45 T 14-10-2018 AMIS_44880 b9deba2135e7fbbca3a851a40f48daa7 341 SMART SM00062 33 252 0.0038 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMIS_44880 b9deba2135e7fbbca3a851a40f48daa7 341 Gene3D G3DSA:3.40.190.10 114 211 8.1E-53 T 14-10-2018 AMIS_44880 b9deba2135e7fbbca3a851a40f48daa7 341 Pfam PF09084 NMT1/THI5 like 117 256 4.0E-12 T 14-10-2018 IPR015168 SsuA/THI5-like AMIS_44880 b9deba2135e7fbbca3a851a40f48daa7 341 SUPERFAMILY SSF53850 32 257 5.85E-35 T 14-10-2018 AMIS_44880 b9deba2135e7fbbca3a851a40f48daa7 341 Gene3D G3DSA:3.40.190.10 34 246 8.1E-53 T 14-10-2018 AMIS_44880 b9deba2135e7fbbca3a851a40f48daa7 341 Gene3D G3DSA:1.10.8.450 247 278 8.1E-53 T 14-10-2018 AMIS_33650 b1fe4dbe2b611111374d2f9876eefa75 823 Pfam PF02687 FtsX-like permease family 282 377 6.6E-8 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AMIS_32250 e8d15c616405e23239020afe5298024d 207 SUPERFAMILY SSF53335 8 193 5.11E-34 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_32250 e8d15c616405e23239020afe5298024d 207 Pfam PF08241 Methyltransferase domain 47 140 8.3E-20 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 AMIS_32250 e8d15c616405e23239020afe5298024d 207 Gene3D G3DSA:3.40.50.150 7 199 3.0E-31 T 14-10-2018 AMIS_23350 76f34d855ab23f253b7c4dc671ae9958 782 Pfam PF03632 Glycosyl hydrolase family 65 central catalytic domain 327 687 1.9E-118 T 14-10-2018 IPR005195 Glycoside hydrolase, family 65, central catalytic GO:0003824|GO:0005975 AMIS_23350 76f34d855ab23f253b7c4dc671ae9958 782 Gene3D G3DSA:1.50.10.10 321 677 1.3E-105 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 AMIS_23350 76f34d855ab23f253b7c4dc671ae9958 782 SUPERFAMILY SSF74650 7 271 1.38E-59 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 AMIS_23350 76f34d855ab23f253b7c4dc671ae9958 782 Gene3D G3DSA:2.70.98.40 4 267 8.7E-59 T 14-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily AMIS_23350 76f34d855ab23f253b7c4dc671ae9958 782 SUPERFAMILY SSF48208 277 742 1.05E-102 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AMIS_23350 76f34d855ab23f253b7c4dc671ae9958 782 Pfam PF03636 Glycosyl hydrolase family 65, N-terminal domain 16 270 4.8E-61 T 14-10-2018 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 AMIS_23350 76f34d855ab23f253b7c4dc671ae9958 782 Pfam PF03633 Glycosyl hydrolase family 65, C-terminal domain 696 748 8.4E-12 T 14-10-2018 IPR005194 Glycoside hydrolase family 65, C-terminal AMIS_23350 76f34d855ab23f253b7c4dc671ae9958 782 PIRSF PIRSF036289 1 760 3.0E-193 T 14-10-2018 IPR017045 Maltose phosphorylase/glycosyl hydrolase/vacuolar acid trehalase AMIS_23350 76f34d855ab23f253b7c4dc671ae9958 782 Gene3D G3DSA:2.60.420.10 678 757 7.5E-16 T 14-10-2018 AMIS_75620 ff530892ff0372ae0329155816e60637 477 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 318 325 - T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AMIS_75620 ff530892ff0372ae0329155816e60637 477 SUPERFAMILY SSF52949 28 156 7.06E-9 T 14-10-2018 AMIS_75620 ff530892ff0372ae0329155816e60637 477 Gene3D G3DSA:3.40.220.10 7 136 3.9E-12 T 14-10-2018 AMIS_75620 ff530892ff0372ae0329155816e60637 477 PRINTS PR00481 Cytosol aminopeptidase signature 255 276 3.3E-45 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMIS_75620 ff530892ff0372ae0329155816e60637 477 PRINTS PR00481 Cytosol aminopeptidase signature 233 250 3.3E-45 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMIS_75620 ff530892ff0372ae0329155816e60637 477 PRINTS PR00481 Cytosol aminopeptidase signature 292 313 3.3E-45 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMIS_75620 ff530892ff0372ae0329155816e60637 477 PRINTS PR00481 Cytosol aminopeptidase signature 314 334 3.3E-45 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMIS_75620 ff530892ff0372ae0329155816e60637 477 PRINTS PR00481 Cytosol aminopeptidase signature 343 358 3.3E-45 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMIS_75620 ff530892ff0372ae0329155816e60637 477 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 30 122 3.3E-9 T 14-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AMIS_75620 ff530892ff0372ae0329155816e60637 477 Gene3D G3DSA:3.40.630.10 141 470 3.9E-117 T 14-10-2018 AMIS_75620 ff530892ff0372ae0329155816e60637 477 SUPERFAMILY SSF53187 154 465 5.65E-102 T 14-10-2018 AMIS_75620 ff530892ff0372ae0329155816e60637 477 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 159 461 2.2E-107 T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AMIS_54580 d7c3d7382345c3a8bf22f0a0d3f1eda3 725 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 107 724 43.242 T 14-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 AMIS_54580 d7c3d7382345c3a8bf22f0a0d3f1eda3 725 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 115 722 1.1E-272 T 14-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 AMIS_54580 d7c3d7382345c3a8bf22f0a0d3f1eda3 725 PIRSF PIRSF000463 21 725 6.7E-285 T 14-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 AMIS_54580 d7c3d7382345c3a8bf22f0a0d3f1eda3 725 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 626 723 4.4E-19 T 14-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 AMIS_54580 d7c3d7382345c3a8bf22f0a0d3f1eda3 725 SUPERFAMILY SSF51445 184 614 7.35E-111 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_54580 d7c3d7382345c3a8bf22f0a0d3f1eda3 725 SUPERFAMILY SSF81296 29 120 3.85E-17 T 14-10-2018 IPR014756 Immunoglobulin E-set AMIS_54580 d7c3d7382345c3a8bf22f0a0d3f1eda3 725 Pfam PF00128 Alpha amylase, catalytic domain 273 351 1.7E-9 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMIS_54580 d7c3d7382345c3a8bf22f0a0d3f1eda3 725 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 131 210 2.6E-17 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 AMIS_54580 d7c3d7382345c3a8bf22f0a0d3f1eda3 725 SMART SM00642 253 625 1.8E-7 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMIS_54580 d7c3d7382345c3a8bf22f0a0d3f1eda3 725 Gene3D G3DSA:3.20.20.80 226 620 2.9E-175 T 14-10-2018 AMIS_54580 d7c3d7382345c3a8bf22f0a0d3f1eda3 725 SUPERFAMILY SSF51011 621 724 2.52E-32 T 14-10-2018 AMIS_54580 d7c3d7382345c3a8bf22f0a0d3f1eda3 725 Gene3D G3DSA:2.60.40.10 16 224 2.1E-63 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_54580 d7c3d7382345c3a8bf22f0a0d3f1eda3 725 SUPERFAMILY SSF81296 137 204 5.74E-8 T 14-10-2018 IPR014756 Immunoglobulin E-set AMIS_54580 d7c3d7382345c3a8bf22f0a0d3f1eda3 725 Gene3D G3DSA:2.60.40.1180 621 724 2.6E-39 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta AMIS_74920 efac9046e34356ec57425dc59d33bad2 324 SUPERFAMILY SSF51735 1 322 2.31E-87 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_74920 efac9046e34356ec57425dc59d33bad2 324 Gene3D G3DSA:3.40.50.720 4 251 5.9E-112 T 14-10-2018 AMIS_74920 efac9046e34356ec57425dc59d33bad2 324 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 251 2.0E-51 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AMIS_74920 efac9046e34356ec57425dc59d33bad2 324 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 322 4.2E-115 T 14-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 AMIS_74920 efac9046e34356ec57425dc59d33bad2 324 Gene3D G3DSA:3.90.25.10 171 304 5.9E-112 T 14-10-2018 AMIS_71530 622a430e71c6b080f1b07462958fa554 305 Gene3D G3DSA:1.10.287.950 10 301 1.3E-38 T 14-10-2018 AMIS_71530 622a430e71c6b080f1b07462958fa554 305 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 144 271 8.6E-27 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_71530 622a430e71c6b080f1b07462958fa554 305 SUPERFAMILY SSF58104 43 274 1.01E-37 T 14-10-2018 AMIS_71530 622a430e71c6b080f1b07462958fa554 305 SMART SM00283 89 299 8.2E-5 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_19480 1625ac4ed89b4167b3931be128e57d02 134 SMART SM00345 14 73 9.2E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_19480 1625ac4ed89b4167b3931be128e57d02 134 SUPERFAMILY SSF46785 1 83 1.63E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_19480 1625ac4ed89b4167b3931be128e57d02 134 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 9.6E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_19480 1625ac4ed89b4167b3931be128e57d02 134 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 9.6E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_19480 1625ac4ed89b4167b3931be128e57d02 134 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 73 7.8E-19 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_19480 1625ac4ed89b4167b3931be128e57d02 134 Gene3D G3DSA:1.10.10.10 7 105 1.4E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_69850 cc8bf2fc3b4832e5f6ee394c8b2452b8 198 Gene3D G3DSA:1.10.10.60 1 60 2.6E-21 T 14-10-2018 AMIS_69850 cc8bf2fc3b4832e5f6ee394c8b2452b8 198 SUPERFAMILY SSF48498 85 195 1.85E-18 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_69850 cc8bf2fc3b4832e5f6ee394c8b2452b8 198 SUPERFAMILY SSF46689 7 86 7.7E-23 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_69850 cc8bf2fc3b4832e5f6ee394c8b2452b8 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 5.0E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_69850 cc8bf2fc3b4832e5f6ee394c8b2452b8 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 5.0E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_69850 cc8bf2fc3b4832e5f6ee394c8b2452b8 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 65 1.6E-19 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_69850 cc8bf2fc3b4832e5f6ee394c8b2452b8 198 Gene3D G3DSA:1.10.357.10 61 196 2.8E-23 T 14-10-2018 AMIS_6750 62c5feff55d5cd811820c811d6669e84 598 Pfam PF00005 ABC transporter 356 505 7.5E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_6750 62c5feff55d5cd811820c811d6669e84 598 SMART SM00382 365 567 5.1E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_6750 62c5feff55d5cd811820c811d6669e84 598 Gene3D G3DSA:1.20.1560.10 3 327 9.6E-59 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMIS_6750 62c5feff55d5cd811820c811d6669e84 598 Gene3D G3DSA:3.40.50.300 335 590 2.2E-72 T 14-10-2018 AMIS_6750 62c5feff55d5cd811820c811d6669e84 598 SUPERFAMILY SSF52540 335 575 2.04E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_6750 62c5feff55d5cd811820c811d6669e84 598 SUPERFAMILY SSF90123 20 324 2.49E-58 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMIS_6750 62c5feff55d5cd811820c811d6669e84 598 Pfam PF00664 ABC transporter transmembrane region 33 299 6.3E-31 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AMIS_59340 ef41c78796ae33f0713ab575b4206743 124 Gene3D G3DSA:2.60.120.10 4 124 8.7E-35 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMIS_59340 ef41c78796ae33f0713ab575b4206743 124 Pfam PF07883 Cupin domain 43 111 8.1E-14 T 14-10-2018 IPR013096 Cupin 2, conserved barrel AMIS_59340 ef41c78796ae33f0713ab575b4206743 124 SUPERFAMILY SSF51182 11 120 2.7E-25 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily AMIS_56940 4ced15f792480ee59ed9aab7865e8395 287 SUPERFAMILY SSF55447 182 281 2.22E-12 T 14-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily AMIS_56940 4ced15f792480ee59ed9aab7865e8395 287 SUPERFAMILY SSF56176 3 167 2.13E-32 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AMIS_56940 4ced15f792480ee59ed9aab7865e8395 287 Gene3D G3DSA:3.30.390.50 176 278 1.1E-12 T 14-10-2018 AMIS_56940 4ced15f792480ee59ed9aab7865e8395 287 Gene3D G3DSA:3.30.43.10 1 53 6.7E-6 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 AMIS_56940 4ced15f792480ee59ed9aab7865e8395 287 Gene3D G3DSA:3.30.465.10 54 170 4.3E-30 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AMIS_56940 4ced15f792480ee59ed9aab7865e8395 287 SMART SM01092 183 277 6.1E-5 T 14-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal AMIS_56940 4ced15f792480ee59ed9aab7865e8395 287 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 3 165 2.1E-27 T 14-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 AMIS_56940 4ced15f792480ee59ed9aab7865e8395 287 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 190 276 1.0E-7 T 14-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal AMIS_61490 5f0dd3ae6c24cd4edfbd09f5d300d3f6 479 Gene3D G3DSA:1.10.40.30 369 441 1.1E-169 T 14-10-2018 AMIS_61490 5f0dd3ae6c24cd4edfbd09f5d300d3f6 479 ProSitePatterns PS00163 Fumarate lyases signature. 284 293 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AMIS_61490 5f0dd3ae6c24cd4edfbd09f5d300d3f6 479 Pfam PF14698 Argininosuccinate lyase C-terminal 372 439 6.5E-24 T 14-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AMIS_61490 5f0dd3ae6c24cd4edfbd09f5d300d3f6 479 PRINTS PR00145 Argininosuccinate lyase family signature 151 171 7.9E-56 T 14-10-2018 AMIS_61490 5f0dd3ae6c24cd4edfbd09f5d300d3f6 479 PRINTS PR00145 Argininosuccinate lyase family signature 202 218 7.9E-56 T 14-10-2018 AMIS_61490 5f0dd3ae6c24cd4edfbd09f5d300d3f6 479 PRINTS PR00145 Argininosuccinate lyase family signature 240 264 7.9E-56 T 14-10-2018 AMIS_61490 5f0dd3ae6c24cd4edfbd09f5d300d3f6 479 PRINTS PR00145 Argininosuccinate lyase family signature 284 300 7.9E-56 T 14-10-2018 AMIS_61490 5f0dd3ae6c24cd4edfbd09f5d300d3f6 479 PRINTS PR00145 Argininosuccinate lyase family signature 110 132 7.9E-56 T 14-10-2018 AMIS_61490 5f0dd3ae6c24cd4edfbd09f5d300d3f6 479 PRINTS PR00145 Argininosuccinate lyase family signature 319 338 7.9E-56 T 14-10-2018 AMIS_61490 5f0dd3ae6c24cd4edfbd09f5d300d3f6 479 Gene3D G3DSA:1.20.200.10 128 457 1.1E-169 T 14-10-2018 AMIS_61490 5f0dd3ae6c24cd4edfbd09f5d300d3f6 479 Hamap MF_00006 Argininosuccinate lyase [argH]. 11 462 40.373 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AMIS_61490 5f0dd3ae6c24cd4edfbd09f5d300d3f6 479 PRINTS PR00149 Fumarate lyase superfamily signature 240 267 4.9E-25 T 14-10-2018 IPR000362 Fumarate lyase family AMIS_61490 5f0dd3ae6c24cd4edfbd09f5d300d3f6 479 PRINTS PR00149 Fumarate lyase superfamily signature 284 300 4.9E-25 T 14-10-2018 IPR000362 Fumarate lyase family AMIS_61490 5f0dd3ae6c24cd4edfbd09f5d300d3f6 479 PRINTS PR00149 Fumarate lyase superfamily signature 111 129 4.9E-25 T 14-10-2018 IPR000362 Fumarate lyase family AMIS_61490 5f0dd3ae6c24cd4edfbd09f5d300d3f6 479 PRINTS PR00149 Fumarate lyase superfamily signature 156 174 4.9E-25 T 14-10-2018 IPR000362 Fumarate lyase family AMIS_61490 5f0dd3ae6c24cd4edfbd09f5d300d3f6 479 TIGRFAM TIGR00838 argH: argininosuccinate lyase 12 464 1.3E-169 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AMIS_61490 5f0dd3ae6c24cd4edfbd09f5d300d3f6 479 Gene3D G3DSA:1.10.275.10 34 238 1.1E-169 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal AMIS_61490 5f0dd3ae6c24cd4edfbd09f5d300d3f6 479 Pfam PF00206 Lyase 28 309 8.1E-65 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal AMIS_61490 5f0dd3ae6c24cd4edfbd09f5d300d3f6 479 SUPERFAMILY SSF48557 16 467 6.75E-133 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 AMIS_45920 cc1a66f214fd404ade7030a438b43ec3 308 Pfam PF07859 alpha/beta hydrolase fold 73 281 1.2E-72 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 AMIS_45920 cc1a66f214fd404ade7030a438b43ec3 308 Gene3D G3DSA:3.40.50.1820 12 308 9.9E-95 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_45920 cc1a66f214fd404ade7030a438b43ec3 308 SUPERFAMILY SSF53474 33 307 3.95E-71 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_480 3691cbeebe5f60bed2f97c1ecf956a20 216 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 3 186 3.9E-70 T 14-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AMIS_480 3691cbeebe5f60bed2f97c1ecf956a20 216 Pfam PF00117 Glutamine amidotransferase class-I 4 186 1.2E-52 T 14-10-2018 IPR017926 Glutamine amidotransferase AMIS_480 3691cbeebe5f60bed2f97c1ecf956a20 216 SUPERFAMILY SSF52317 2 188 1.36E-54 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_480 3691cbeebe5f60bed2f97c1ecf956a20 216 PRINTS PR00097 Anthranilate synthase component II signature 75 86 3.6E-35 T 14-10-2018 AMIS_480 3691cbeebe5f60bed2f97c1ecf956a20 216 PRINTS PR00097 Anthranilate synthase component II signature 100 108 3.6E-35 T 14-10-2018 AMIS_480 3691cbeebe5f60bed2f97c1ecf956a20 216 PRINTS PR00097 Anthranilate synthase component II signature 3 17 3.6E-35 T 14-10-2018 AMIS_480 3691cbeebe5f60bed2f97c1ecf956a20 216 PRINTS PR00097 Anthranilate synthase component II signature 48 57 3.6E-35 T 14-10-2018 AMIS_480 3691cbeebe5f60bed2f97c1ecf956a20 216 PRINTS PR00097 Anthranilate synthase component II signature 165 178 3.6E-35 T 14-10-2018 AMIS_480 3691cbeebe5f60bed2f97c1ecf956a20 216 PRINTS PR00097 Anthranilate synthase component II signature 120 132 3.6E-35 T 14-10-2018 AMIS_480 3691cbeebe5f60bed2f97c1ecf956a20 216 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 75 91 8.6E-9 T 14-10-2018 AMIS_480 3691cbeebe5f60bed2f97c1ecf956a20 216 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 45 59 8.6E-9 T 14-10-2018 AMIS_480 3691cbeebe5f60bed2f97c1ecf956a20 216 PRINTS PR00096 Glutamine amidotransferase superfamily signature 165 178 3.4E-14 T 14-10-2018 AMIS_480 3691cbeebe5f60bed2f97c1ecf956a20 216 PRINTS PR00096 Glutamine amidotransferase superfamily signature 48 57 3.4E-14 T 14-10-2018 AMIS_480 3691cbeebe5f60bed2f97c1ecf956a20 216 PRINTS PR00096 Glutamine amidotransferase superfamily signature 75 86 3.4E-14 T 14-10-2018 AMIS_480 3691cbeebe5f60bed2f97c1ecf956a20 216 Gene3D G3DSA:3.40.50.880 1 189 9.8E-62 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_7060 041f4128837de21139828de2958a94cd 308 SUPERFAMILY SSF161098 90 294 1.55E-16 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_7060 041f4128837de21139828de2958a94cd 308 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 307 3.0E-36 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_7060 041f4128837de21139828de2958a94cd 308 Gene3D G3DSA:1.10.3720.10 84 302 9.3E-20 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_64840 830fd9dddb2ea67e0827d87199f3d8a1 444 Gene3D G3DSA:3.40.190.10 61 363 4.4E-131 T 14-10-2018 AMIS_64840 830fd9dddb2ea67e0827d87199f3d8a1 444 SUPERFAMILY SSF53850 47 429 4.51E-63 T 14-10-2018 AMIS_64840 830fd9dddb2ea67e0827d87199f3d8a1 444 Gene3D G3DSA:3.40.190.10 158 424 4.4E-131 T 14-10-2018 AMIS_64840 830fd9dddb2ea67e0827d87199f3d8a1 444 Pfam PF01547 Bacterial extracellular solute-binding protein 57 342 9.1E-30 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein AMIS_35020 e4adb7bca5beaa7b2f0d526d545c110a 232 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 18 33 - T 14-10-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 AMIS_35020 e4adb7bca5beaa7b2f0d526d545c110a 232 Gene3D G3DSA:3.40.1080.10 1 224 2.8E-82 T 14-10-2018 AMIS_35020 e4adb7bca5beaa7b2f0d526d545c110a 232 SMART SM00882 5 214 5.9E-75 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 AMIS_35020 e4adb7bca5beaa7b2f0d526d545c110a 232 SUPERFAMILY SSF100950 3 218 2.04E-74 T 14-10-2018 IPR037171 NagB/RpiA transferase-like AMIS_35020 e4adb7bca5beaa7b2f0d526d545c110a 232 Pfam PF01144 Coenzyme A transferase 6 213 6.1E-67 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 AMIS_35020 e4adb7bca5beaa7b2f0d526d545c110a 232 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 1 214 1.8E-73 T 14-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 AMIS_410 0e1dd89a22ee4338dd3b3c8cd38a4dd3 261 SMART SM00240 187 237 1.4E-16 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 AMIS_410 0e1dd89a22ee4338dd3b3c8cd38a4dd3 261 SUPERFAMILY SSF49879 139 259 4.4E-31 T 14-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 AMIS_410 0e1dd89a22ee4338dd3b3c8cd38a4dd3 261 Gene3D G3DSA:2.60.200.20 165 260 3.3E-31 T 14-10-2018 AMIS_410 0e1dd89a22ee4338dd3b3c8cd38a4dd3 261 Pfam PF12401 Protein of unknown function (DUF2662) 13 126 5.8E-39 T 14-10-2018 IPR022128 Domain of unknown function DUF3662 AMIS_410 0e1dd89a22ee4338dd3b3c8cd38a4dd3 261 Pfam PF16697 Inner membrane component of T3SS, cytoplasmic domain 177 258 1.4E-20 T 14-10-2018 IPR032030 YscD, cytoplasmic domain AMIS_410 0e1dd89a22ee4338dd3b3c8cd38a4dd3 261 Gene3D G3DSA:3.30.2320.60 7 135 4.0E-42 T 14-10-2018 AMIS_16750 e8cbac128f7f1dd720828ff498ab3027 147 SUPERFAMILY SSF55811 5 92 2.98E-20 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMIS_16750 e8cbac128f7f1dd720828ff498ab3027 147 Gene3D G3DSA:3.90.79.10 14 120 4.2E-15 T 14-10-2018 AMIS_16750 e8cbac128f7f1dd720828ff498ab3027 147 ProSitePatterns PS00893 Nudix box signature. 52 73 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMIS_16750 e8cbac128f7f1dd720828ff498ab3027 147 Pfam PF00293 NUDIX domain 24 85 1.7E-12 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMIS_16750 e8cbac128f7f1dd720828ff498ab3027 147 PRINTS PR00502 NUDIX hydrolase family signature 61 76 3.6E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AMIS_16750 e8cbac128f7f1dd720828ff498ab3027 147 PRINTS PR00502 NUDIX hydrolase family signature 47 61 3.6E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AMIS_51490 1587944ec7d3e28ed2bf9a9a4aa88734 224 Gene3D G3DSA:1.10.3720.10 20 212 9.8E-30 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_51490 1587944ec7d3e28ed2bf9a9a4aa88734 224 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 42 210 7.3E-24 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_51490 1587944ec7d3e28ed2bf9a9a4aa88734 224 SUPERFAMILY SSF161098 19 203 1.57E-35 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_6000 8fc60accabe2adcb433696d9f379cd16 700 SUPERFAMILY SSF54980 406 483 1.22E-25 T 14-10-2018 IPR035647 EF-G domain III/V-like AMIS_6000 8fc60accabe2adcb433696d9f379cd16 700 Pfam PF03144 Elongation factor Tu domain 2 326 393 1.4E-17 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AMIS_6000 8fc60accabe2adcb433696d9f379cd16 700 Gene3D G3DSA:3.30.70.870 408 482 9.6E-33 T 14-10-2018 AMIS_6000 8fc60accabe2adcb433696d9f379cd16 700 Pfam PF03764 Elongation factor G, domain IV 481 603 9.1E-46 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AMIS_6000 8fc60accabe2adcb433696d9f379cd16 700 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 12 182 3.7E-34 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AMIS_6000 8fc60accabe2adcb433696d9f379cd16 700 PRINTS PR00315 GTP-binding elongation factor signature 60 68 2.1E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_6000 8fc60accabe2adcb433696d9f379cd16 700 PRINTS PR00315 GTP-binding elongation factor signature 14 27 2.1E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_6000 8fc60accabe2adcb433696d9f379cd16 700 PRINTS PR00315 GTP-binding elongation factor signature 80 90 2.1E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_6000 8fc60accabe2adcb433696d9f379cd16 700 PRINTS PR00315 GTP-binding elongation factor signature 132 141 2.1E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_6000 8fc60accabe2adcb433696d9f379cd16 700 PRINTS PR00315 GTP-binding elongation factor signature 96 107 2.1E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_6000 8fc60accabe2adcb433696d9f379cd16 700 Pfam PF14492 Elongation Factor G, domain II 406 480 5.8E-35 T 14-10-2018 AMIS_6000 8fc60accabe2adcb433696d9f379cd16 700 SUPERFAMILY SSF54211 481 605 2.78E-40 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMIS_6000 8fc60accabe2adcb433696d9f379cd16 700 SUPERFAMILY SSF52540 10 284 8.29E-108 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_6000 8fc60accabe2adcb433696d9f379cd16 700 Gene3D G3DSA:2.40.30.10 296 407 5.5E-45 T 14-10-2018 AMIS_6000 8fc60accabe2adcb433696d9f379cd16 700 Pfam PF00009 Elongation factor Tu GTP binding domain 11 284 3.9E-67 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_6000 8fc60accabe2adcb433696d9f379cd16 700 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 53 68 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site AMIS_6000 8fc60accabe2adcb433696d9f379cd16 700 TIGRFAM TIGR00484 EF-G: translation elongation factor G 8 697 0.0 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AMIS_6000 8fc60accabe2adcb433696d9f379cd16 700 SMART SM00889 482 604 1.7E-71 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AMIS_6000 8fc60accabe2adcb433696d9f379cd16 700 Gene3D G3DSA:3.30.230.10 486 693 7.6E-86 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMIS_6000 8fc60accabe2adcb433696d9f379cd16 700 Gene3D G3DSA:3.40.50.300 5 295 1.0E-114 T 14-10-2018 AMIS_6000 8fc60accabe2adcb433696d9f379cd16 700 SUPERFAMILY SSF50447 267 406 2.43E-37 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AMIS_6000 8fc60accabe2adcb433696d9f379cd16 700 SUPERFAMILY SSF54980 609 695 5.28E-30 T 14-10-2018 IPR035647 EF-G domain III/V-like AMIS_6000 8fc60accabe2adcb433696d9f379cd16 700 Pfam PF00679 Elongation factor G C-terminus 607 692 2.7E-29 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like AMIS_6000 8fc60accabe2adcb433696d9f379cd16 700 Hamap MF_00054_B Elongation factor G [fusA]. 8 697 112.564 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AMIS_6000 8fc60accabe2adcb433696d9f379cd16 700 SMART SM00838 606 693 1.1E-56 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like AMIS_6000 8fc60accabe2adcb433696d9f379cd16 700 Gene3D G3DSA:3.30.70.240 610 680 7.6E-86 T 14-10-2018 AMIS_71760 927f4f87db18dfbae7a5e71b724939ea 209 Gene3D G3DSA:3.40.50.300 1 208 3.1E-43 T 14-10-2018 AMIS_71760 927f4f87db18dfbae7a5e71b724939ea 209 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_71760 927f4f87db18dfbae7a5e71b724939ea 209 SUPERFAMILY SSF52540 4 206 8.75E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_71760 927f4f87db18dfbae7a5e71b724939ea 209 Pfam PF00005 ABC transporter 23 160 7.3E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_71760 927f4f87db18dfbae7a5e71b724939ea 209 SMART SM00382 30 207 1.0E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_45270 385ff5201ac59e068bf695e77bd40ac6 227 Gene3D G3DSA:1.10.10.10 135 207 7.5E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_45270 385ff5201ac59e068bf695e77bd40ac6 227 SUPERFAMILY SSF88659 150 203 7.63E-8 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_45270 385ff5201ac59e068bf695e77bd40ac6 227 Pfam PF08281 Sigma-70, region 4 155 202 4.6E-9 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_45270 385ff5201ac59e068bf695e77bd40ac6 227 SUPERFAMILY SSF88946 3 96 6.28E-20 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_45270 385ff5201ac59e068bf695e77bd40ac6 227 Gene3D G3DSA:1.10.1740.10 3 102 1.9E-19 T 14-10-2018 AMIS_45270 385ff5201ac59e068bf695e77bd40ac6 227 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 23 202 9.7E-14 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_45270 385ff5201ac59e068bf695e77bd40ac6 227 Pfam PF04542 Sigma-70 region 2 25 91 3.3E-12 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_1940 a11c9cdaead8fd02ac404cbf52c2eaee 295 Gene3D G3DSA:1.10.357.140 17 170 1.2E-52 T 14-10-2018 AMIS_1940 a11c9cdaead8fd02ac404cbf52c2eaee 295 Pfam PF01040 UbiA prenyltransferase family 43 276 7.7E-50 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 AMIS_1940 a11c9cdaead8fd02ac404cbf52c2eaee 295 Gene3D G3DSA:1.20.120.1780 172 295 8.8E-36 T 14-10-2018 AMIS_1940 a11c9cdaead8fd02ac404cbf52c2eaee 295 TIGRFAM TIGR01475 ubiA_other: putative 4-hydroxybenzoate polyprenyltransferase 10 294 1.4E-95 T 14-10-2018 IPR006371 4-hydroxybenzoate polyprenyltransferase-related AMIS_25520 ed6483f3ad9fb06e18110ee1e8705d49 166 Gene3D G3DSA:3.40.630.30 1 165 1.0E-37 T 14-10-2018 AMIS_25520 ed6483f3ad9fb06e18110ee1e8705d49 166 Pfam PF00583 Acetyltransferase (GNAT) family 55 137 1.4E-16 T 14-10-2018 IPR000182 GNAT domain AMIS_25520 ed6483f3ad9fb06e18110ee1e8705d49 166 SUPERFAMILY SSF55729 1 162 1.89E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_80690 9a90bcb3dddfe36777a374538b597312 222 SUPERFAMILY SSF54593 112 218 9.55E-5 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_80690 9a90bcb3dddfe36777a374538b597312 222 SUPERFAMILY SSF55248 15 90 6.93E-5 T 14-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 AMIS_80690 9a90bcb3dddfe36777a374538b597312 222 Gene3D G3DSA:3.10.180.10 99 221 2.7E-22 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_80690 9a90bcb3dddfe36777a374538b597312 222 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 2 88 7.2E-8 T 14-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 AMIS_17170 ab48e20bf62c12bc4e4306f47d708927 416 Pfam PF01936 NYN domain 5 173 2.2E-17 T 14-10-2018 IPR021139 NYN domain, limkain-b1-type AMIS_17170 ab48e20bf62c12bc4e4306f47d708927 416 Gene3D G3DSA:3.40.50.1010 2 177 7.0E-11 T 14-10-2018 AMIS_17330 94c4569af9c475938e252878b80c6323 326 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 240 324 4.0E-12 T 14-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AMIS_17330 94c4569af9c475938e252878b80c6323 326 SUPERFAMILY SSF53901 2 324 4.86E-41 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_17330 94c4569af9c475938e252878b80c6323 326 Gene3D G3DSA:3.40.47.10 1 177 5.5E-55 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_17330 94c4569af9c475938e252878b80c6323 326 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 107 189 1.5E-15 T 14-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AMIS_17330 94c4569af9c475938e252878b80c6323 326 Gene3D G3DSA:3.40.47.10 180 325 9.9E-23 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_53910 c46c852cde3b3a965bc02e8f6edd3082 414 SUPERFAMILY SSF52374 32 337 1.07E-64 T 14-10-2018 AMIS_53910 c46c852cde3b3a965bc02e8f6edd3082 414 Gene3D G3DSA:3.40.50.620 2 331 1.1E-95 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMIS_53910 c46c852cde3b3a965bc02e8f6edd3082 414 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 78 87 5.2E-19 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AMIS_53910 c46c852cde3b3a965bc02e8f6edd3082 414 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 215 233 5.2E-19 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AMIS_53910 c46c852cde3b3a965bc02e8f6edd3082 414 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 42 53 5.2E-19 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AMIS_53910 c46c852cde3b3a965bc02e8f6edd3082 414 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 246 267 5.2E-19 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AMIS_53910 c46c852cde3b3a965bc02e8f6edd3082 414 Hamap MF_01697 L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase [mshC]. 9 414 53.115 T 14-10-2018 IPR017812 Mycothiol ligase MshC GO:0010125|GO:0035446 AMIS_53910 c46c852cde3b3a965bc02e8f6edd3082 414 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 38 337 3.4E-79 T 14-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 AMIS_53910 c46c852cde3b3a965bc02e8f6edd3082 414 TIGRFAM TIGR03447 mycothiol_MshC: cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase 3 414 3.5E-190 T 14-10-2018 IPR017812 Mycothiol ligase MshC GO:0010125|GO:0035446 AMIS_53910 c46c852cde3b3a965bc02e8f6edd3082 414 Gene3D G3DSA:1.20.120.640 332 414 8.9E-24 T 14-10-2018 AMIS_33750 62199a780831c76c1718039cb0ae31da 322 Gene3D G3DSA:1.10.10.10 1 63 3.0E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_33750 62199a780831c76c1718039cb0ae31da 322 Pfam PF08279 HTH domain 11 60 9.4E-13 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 AMIS_33750 62199a780831c76c1718039cb0ae31da 322 PIRSF PIRSF016838 1 54 0.0015 T 14-10-2018 IPR028349 Protein PafC AMIS_33750 62199a780831c76c1718039cb0ae31da 322 PIRSF PIRSF016838 70 313 1.4E-14 T 14-10-2018 IPR028349 Protein PafC AMIS_33750 62199a780831c76c1718039cb0ae31da 322 SUPERFAMILY SSF46785 2 58 1.61E-9 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_33750 62199a780831c76c1718039cb0ae31da 322 Pfam PF13280 WYL domain 138 303 1.2E-29 T 14-10-2018 IPR026881 WYL domain AMIS_33750 62199a780831c76c1718039cb0ae31da 322 SMART SM00420 5 61 0.0096 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AMIS_12310 164ce6726f298797ace800b3a6d037e6 500 SUPERFAMILY SSF52540 271 481 4.38E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_12310 164ce6726f298797ace800b3a6d037e6 500 Pfam PF00005 ABC transporter 18 168 3.5E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_12310 164ce6726f298797ace800b3a6d037e6 500 SMART SM00382 278 470 2.0E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_12310 164ce6726f298797ace800b3a6d037e6 500 SMART SM00382 27 216 1.1E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_12310 164ce6726f298797ace800b3a6d037e6 500 SUPERFAMILY SSF52540 2 221 4.62E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_12310 164ce6726f298797ace800b3a6d037e6 500 ProSitePatterns PS00211 ABC transporters family signature. 394 408 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_12310 164ce6726f298797ace800b3a6d037e6 500 Gene3D G3DSA:3.40.50.300 266 488 9.9E-45 T 14-10-2018 AMIS_12310 164ce6726f298797ace800b3a6d037e6 500 Pfam PF00005 ABC transporter 271 421 1.2E-19 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_12310 164ce6726f298797ace800b3a6d037e6 500 Gene3D G3DSA:3.40.50.300 1 235 1.1E-49 T 14-10-2018 AMIS_80610 80719ccacd44f0a05caef9f9239fdb94 275 SUPERFAMILY SSF53927 23 273 5.72E-76 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AMIS_80610 80719ccacd44f0a05caef9f9239fdb94 275 Gene3D G3DSA:3.10.20.10 31 121 8.2E-7 T 14-10-2018 AMIS_80610 80719ccacd44f0a05caef9f9239fdb94 275 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 25 273 1.4E-47 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AMIS_80610 80719ccacd44f0a05caef9f9239fdb94 275 Pfam PF02634 FdhD/NarQ family 29 273 9.1E-82 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AMIS_80610 80719ccacd44f0a05caef9f9239fdb94 275 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 3 274 32.75 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AMIS_80610 80719ccacd44f0a05caef9f9239fdb94 275 Gene3D G3DSA:3.40.140.10 128 275 1.6E-50 T 14-10-2018 AMIS_80610 80719ccacd44f0a05caef9f9239fdb94 275 PIRSF PIRSF015626 2 275 9.2E-83 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AMIS_75980 c09e593ac60b8dbc7f6eaa93b45abbd2 227 Gene3D G3DSA:3.40.50.2300 1 121 3.4E-38 T 14-10-2018 AMIS_75980 c09e593ac60b8dbc7f6eaa93b45abbd2 227 SUPERFAMILY SSF52172 3 122 6.26E-42 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_75980 c09e593ac60b8dbc7f6eaa93b45abbd2 227 SUPERFAMILY SSF46894 126 226 1.59E-31 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_75980 c09e593ac60b8dbc7f6eaa93b45abbd2 227 SMART SM00448 2 112 1.4E-44 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_75980 c09e593ac60b8dbc7f6eaa93b45abbd2 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 2.8E-28 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_75980 c09e593ac60b8dbc7f6eaa93b45abbd2 227 Pfam PF00072 Response regulator receiver domain 4 113 6.5E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_75980 c09e593ac60b8dbc7f6eaa93b45abbd2 227 Gene3D G3DSA:1.10.10.10 122 226 9.3E-39 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_75980 c09e593ac60b8dbc7f6eaa93b45abbd2 227 SMART SM00862 149 225 5.2E-29 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_21710 a40a8f3f4487da58896f287325af6c99 243 SUPERFAMILY SSF51735 8 224 2.63E-59 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_21710 a40a8f3f4487da58896f287325af6c99 243 Gene3D G3DSA:3.40.50.720 2 229 5.4E-61 T 14-10-2018 AMIS_21710 a40a8f3f4487da58896f287325af6c99 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 189 209 1.2E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_21710 a40a8f3f4487da58896f287325af6c99 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 1.2E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_21710 a40a8f3f4487da58896f287325af6c99 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 1.2E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_21710 a40a8f3f4487da58896f287325af6c99 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 1.2E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_21710 a40a8f3f4487da58896f287325af6c99 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 1.2E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_21710 a40a8f3f4487da58896f287325af6c99 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 1.2E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_21710 a40a8f3f4487da58896f287325af6c99 243 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 224 1.6E-41 T 14-10-2018 AMIS_21710 a40a8f3f4487da58896f287325af6c99 243 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 181 4.3E-4 T 14-10-2018 AMIS_21710 a40a8f3f4487da58896f287325af6c99 243 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMIS_21710 a40a8f3f4487da58896f287325af6c99 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 6.9E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_21710 a40a8f3f4487da58896f287325af6c99 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 6.9E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_21710 a40a8f3f4487da58896f287325af6c99 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 6.9E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_60100 66e4bca156991a5a8a407a6443a3e8bb 527 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 22 155 9.2E-21 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AMIS_60100 66e4bca156991a5a8a407a6443a3e8bb 527 Gene3D G3DSA:3.30.70.3280 392 527 1.9E-38 T 14-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily AMIS_60100 66e4bca156991a5a8a407a6443a3e8bb 527 Pfam PF16658 Class II release factor RF3, C-terminal domain 389 516 1.3E-35 T 14-10-2018 IPR032090 Peptide chain release factor 3, C-terminal AMIS_60100 66e4bca156991a5a8a407a6443a3e8bb 527 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 16 525 8.4E-161 T 14-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 AMIS_60100 66e4bca156991a5a8a407a6443a3e8bb 527 SUPERFAMILY SSF52540 16 279 1.45E-76 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_60100 66e4bca156991a5a8a407a6443a3e8bb 527 Gene3D G3DSA:3.40.50.300 19 381 1.4E-93 T 14-10-2018 AMIS_60100 66e4bca156991a5a8a407a6443a3e8bb 527 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 63 78 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site AMIS_60100 66e4bca156991a5a8a407a6443a3e8bb 527 SUPERFAMILY SSF50447 264 395 4.8E-24 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AMIS_60100 66e4bca156991a5a8a407a6443a3e8bb 527 Gene3D G3DSA:3.40.50.300 26 277 1.4E-93 T 14-10-2018 AMIS_60100 66e4bca156991a5a8a407a6443a3e8bb 527 Pfam PF00009 Elongation factor Tu GTP binding domain 18 279 5.6E-47 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_60100 66e4bca156991a5a8a407a6443a3e8bb 527 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 9 527 46.14 T 14-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 AMIS_60100 66e4bca156991a5a8a407a6443a3e8bb 527 PRINTS PR00315 GTP-binding elongation factor signature 90 100 8.0E-11 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_60100 66e4bca156991a5a8a407a6443a3e8bb 527 PRINTS PR00315 GTP-binding elongation factor signature 142 151 8.0E-11 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_60100 66e4bca156991a5a8a407a6443a3e8bb 527 PRINTS PR00315 GTP-binding elongation factor signature 106 117 8.0E-11 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_60100 66e4bca156991a5a8a407a6443a3e8bb 527 PRINTS PR00315 GTP-binding elongation factor signature 20 33 8.0E-11 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_60100 66e4bca156991a5a8a407a6443a3e8bb 527 PRINTS PR00315 GTP-binding elongation factor signature 70 78 8.0E-11 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_60100 66e4bca156991a5a8a407a6443a3e8bb 527 SUPERFAMILY SSF54980 395 468 7.55E-10 T 14-10-2018 IPR035647 EF-G domain III/V-like AMIS_8120 cc5ec79ea5c4ca4ecc18ec0e9e0dcd46 380 SUPERFAMILY SSF52440 6 101 1.44E-23 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AMIS_8120 cc5ec79ea5c4ca4ecc18ec0e9e0dcd46 380 Pfam PF02222 ATP-grasp domain 115 281 3.5E-49 T 14-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type AMIS_8120 cc5ec79ea5c4ca4ecc18ec0e9e0dcd46 380 SUPERFAMILY SSF51246 307 377 5.02E-16 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AMIS_8120 cc5ec79ea5c4ca4ecc18ec0e9e0dcd46 380 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 9 362 39.982 T 14-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 AMIS_8120 cc5ec79ea5c4ca4ecc18ec0e9e0dcd46 380 SUPERFAMILY SSF56059 106 301 4.42E-57 T 14-10-2018 AMIS_8120 cc5ec79ea5c4ca4ecc18ec0e9e0dcd46 380 Gene3D G3DSA:3.30.470.20 182 379 9.7E-72 T 14-10-2018 AMIS_8120 cc5ec79ea5c4ca4ecc18ec0e9e0dcd46 380 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 10 367 1.3E-115 T 14-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 AMIS_8120 cc5ec79ea5c4ca4ecc18ec0e9e0dcd46 380 Gene3D G3DSA:3.30.1490.20 117 181 1.9E-13 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AMIS_8120 cc5ec79ea5c4ca4ecc18ec0e9e0dcd46 380 Gene3D G3DSA:3.40.50.20 7 115 1.5E-28 T 14-10-2018 AMIS_78380 d4e542b9fad98f464215158ad1247879 421 PIRSF PIRSF000726 58 414 5.7E-131 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AMIS_78380 d4e542b9fad98f464215158ad1247879 421 PIRSF PIRSF000726 1 62 5.1E-21 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AMIS_78380 d4e542b9fad98f464215158ad1247879 421 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AMIS_78380 d4e542b9fad98f464215158ad1247879 421 Gene3D G3DSA:3.40.1160.10 1 244 4.2E-87 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AMIS_78380 d4e542b9fad98f464215158ad1247879 421 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 64 405 2.9E-119 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AMIS_78380 d4e542b9fad98f464215158ad1247879 421 Pfam PF00696 Amino acid kinase family 3 231 9.6E-57 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AMIS_78380 d4e542b9fad98f464215158ad1247879 421 SUPERFAMILY SSF55021 251 329 6.47E-19 T 14-10-2018 AMIS_78380 d4e542b9fad98f464215158ad1247879 421 Gene3D G3DSA:3.30.2130.10 245 421 4.3E-65 T 14-10-2018 AMIS_78380 d4e542b9fad98f464215158ad1247879 421 SUPERFAMILY SSF55021 332 411 1.27E-21 T 14-10-2018 AMIS_78380 d4e542b9fad98f464215158ad1247879 421 Pfam PF01842 ACT domain 268 329 1.2E-9 T 14-10-2018 IPR002912 ACT domain AMIS_78380 d4e542b9fad98f464215158ad1247879 421 SUPERFAMILY SSF53633 4 244 2.62E-73 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AMIS_78380 d4e542b9fad98f464215158ad1247879 421 Pfam PF13840 ACT domain 341 403 9.0E-11 T 14-10-2018 IPR027795 CASTOR, ACT domain AMIS_78380 d4e542b9fad98f464215158ad1247879 421 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 2 406 3.5E-127 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AMIS_53620 446bba8f4f225192c3bb2a8dfd9c8b20 396 Pfam PF01757 Acyltransferase family 7 357 8.6E-18 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 AMIS_18550 e5725c0fce1fbe799bd198b38fbbb6f7 331 SUPERFAMILY SSF47240 2 318 3.48E-89 T 14-10-2018 IPR009078 Ferritin-like superfamily AMIS_18550 e5725c0fce1fbe799bd198b38fbbb6f7 331 Gene3D G3DSA:1.10.620.20 1 318 9.4E-101 T 14-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 AMIS_18550 e5725c0fce1fbe799bd198b38fbbb6f7 331 Pfam PF00268 Ribonucleotide reductase, small chain 10 294 1.3E-78 T 14-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMIS_18550 e5725c0fce1fbe799bd198b38fbbb6f7 331 PIRSF PIRSF000355 1 330 3.8E-106 T 14-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMIS_45770 c4893fd6a4b2afde8547606e9ac73a11 178 SUPERFAMILY SSF69118 48 165 2.22E-34 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AMIS_45770 c4893fd6a4b2afde8547606e9ac73a11 178 Gene3D G3DSA:1.20.1290.10 23 168 4.4E-39 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AMIS_45770 c4893fd6a4b2afde8547606e9ac73a11 178 Pfam PF02627 Carboxymuconolactone decarboxylase family 77 162 4.1E-23 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AMIS_59110 18a3617c93b282cfe1ea61eb69119749 536 Pfam PF00672 HAMP domain 221 265 3.9E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_59110 18a3617c93b282cfe1ea61eb69119749 536 Gene3D G3DSA:1.10.287.950 221 536 6.6E-67 T 14-10-2018 AMIS_59110 18a3617c93b282cfe1ea61eb69119749 536 Pfam PF12729 Four helix bundle sensory module for signal transduction 14 194 2.6E-12 T 14-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain AMIS_59110 18a3617c93b282cfe1ea61eb69119749 536 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 341 507 1.5E-32 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_59110 18a3617c93b282cfe1ea61eb69119749 536 SMART SM00283 281 535 5.8E-47 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_59110 18a3617c93b282cfe1ea61eb69119749 536 SUPERFAMILY SSF58104 241 534 1.15E-62 T 14-10-2018 AMIS_59110 18a3617c93b282cfe1ea61eb69119749 536 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 15 40 7.9E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_59110 18a3617c93b282cfe1ea61eb69119749 536 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 379 406 7.9E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_59110 18a3617c93b282cfe1ea61eb69119749 536 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 302 331 7.9E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_59110 18a3617c93b282cfe1ea61eb69119749 536 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 408 437 7.9E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_59110 18a3617c93b282cfe1ea61eb69119749 536 SMART SM00304 413 469 100.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_59110 18a3617c93b282cfe1ea61eb69119749 536 SMART SM00304 221 273 8.1E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_59110 18a3617c93b282cfe1ea61eb69119749 536 SMART SM00304 476 532 110.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_56030 cdf4ee33449a1a396b0c39c4dc90b887 857 Pfam PF00656 Caspase domain 18 202 6.3E-13 T 14-10-2018 AMIS_56030 cdf4ee33449a1a396b0c39c4dc90b887 857 Gene3D G3DSA:3.40.50.1460 15 242 7.9E-15 T 14-10-2018 AMIS_56030 cdf4ee33449a1a396b0c39c4dc90b887 857 SUPERFAMILY SSF52129 12 221 2.09E-11 T 14-10-2018 IPR029030 Caspase-like domain superfamily AMIS_76110 03a3f7e922d72c4cc8d600b49df69d22 276 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 8 108 2.3E-10 T 14-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 AMIS_76110 03a3f7e922d72c4cc8d600b49df69d22 276 Gene3D G3DSA:3.30.530.20 1 136 5.8E-26 T 14-10-2018 IPR023393 START-like domain superfamily AMIS_76110 03a3f7e922d72c4cc8d600b49df69d22 276 SUPERFAMILY SSF55961 3 134 2.75E-18 T 14-10-2018 AMIS_37190 f7d0b9e77f712d3ef206195b081d9396 382 Gene3D G3DSA:2.40.110.10 121 234 3.8E-42 T 14-10-2018 AMIS_37190 f7d0b9e77f712d3ef206195b081d9396 382 PIRSF PIRSF016578 5 380 6.7E-14 T 14-10-2018 AMIS_37190 f7d0b9e77f712d3ef206195b081d9396 382 Gene3D G3DSA:1.20.140.10 235 382 1.5E-59 T 14-10-2018 AMIS_37190 f7d0b9e77f712d3ef206195b081d9396 382 SUPERFAMILY SSF47203 227 378 3.54E-60 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMIS_37190 f7d0b9e77f712d3ef206195b081d9396 382 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 216 1.6E-28 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMIS_37190 f7d0b9e77f712d3ef206195b081d9396 382 Gene3D G3DSA:1.10.540.10 1 120 3.8E-39 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMIS_37190 f7d0b9e77f712d3ef206195b081d9396 382 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 335 354 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AMIS_37190 f7d0b9e77f712d3ef206195b081d9396 382 SUPERFAMILY SSF56645 2 241 2.23E-85 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMIS_37190 f7d0b9e77f712d3ef206195b081d9396 382 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 228 376 5.4E-53 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMIS_37190 f7d0b9e77f712d3ef206195b081d9396 382 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 118 1.2E-34 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMIS_3660 ad6c9f54cb4e66d0f249a9ea78137cdb 229 SMART SM00345 11 70 4.1E-22 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_3660 ad6c9f54cb4e66d0f249a9ea78137cdb 229 SMART SM00866 91 208 1.7E-7 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AMIS_3660 ad6c9f54cb4e66d0f249a9ea78137cdb 229 Gene3D G3DSA:1.10.10.10 1 68 2.2E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_3660 ad6c9f54cb4e66d0f249a9ea78137cdb 229 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 70 2.1E-20 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_3660 ad6c9f54cb4e66d0f249a9ea78137cdb 229 SUPERFAMILY SSF46785 3 74 1.92E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_3660 ad6c9f54cb4e66d0f249a9ea78137cdb 229 Pfam PF07702 UTRA domain 108 203 1.3E-13 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AMIS_3660 ad6c9f54cb4e66d0f249a9ea78137cdb 229 Gene3D G3DSA:3.40.1410.10 69 106 3.0E-5 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AMIS_3660 ad6c9f54cb4e66d0f249a9ea78137cdb 229 SUPERFAMILY SSF64288 58 212 4.4E-28 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AMIS_3660 ad6c9f54cb4e66d0f249a9ea78137cdb 229 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 60 1.8E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_3660 ad6c9f54cb4e66d0f249a9ea78137cdb 229 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 30 44 1.8E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_3660 ad6c9f54cb4e66d0f249a9ea78137cdb 229 Gene3D G3DSA:3.40.1410.10 107 215 4.0E-16 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AMIS_29470 491d6cdb626e2117a39d026c817f2ea3 731 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 309 530 6.5E-54 T 14-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 AMIS_29470 491d6cdb626e2117a39d026c817f2ea3 731 Gene3D G3DSA:3.40.50.1700 294 530 6.3E-70 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 AMIS_29470 491d6cdb626e2117a39d026c817f2ea3 731 Gene3D G3DSA:2.60.40.10 531 646 4.5E-33 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_29470 491d6cdb626e2117a39d026c817f2ea3 731 SMART SM01217 564 634 1.5E-30 T 14-10-2018 IPR026891 Fibronectin type III-like domain AMIS_29470 491d6cdb626e2117a39d026c817f2ea3 731 Pfam PF14310 Fibronectin type III-like domain 564 633 1.3E-24 T 14-10-2018 IPR026891 Fibronectin type III-like domain AMIS_29470 491d6cdb626e2117a39d026c817f2ea3 731 SUPERFAMILY SSF51445 5 306 1.26E-93 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_29470 491d6cdb626e2117a39d026c817f2ea3 731 PRINTS PR00133 Glycosyl hydrolase family 3 signature 212 230 1.9E-32 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMIS_29470 491d6cdb626e2117a39d026c817f2ea3 731 PRINTS PR00133 Glycosyl hydrolase family 3 signature 111 127 1.9E-32 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMIS_29470 491d6cdb626e2117a39d026c817f2ea3 731 PRINTS PR00133 Glycosyl hydrolase family 3 signature 29 45 1.9E-32 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMIS_29470 491d6cdb626e2117a39d026c817f2ea3 731 PRINTS PR00133 Glycosyl hydrolase family 3 signature 65 84 1.9E-32 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMIS_29470 491d6cdb626e2117a39d026c817f2ea3 731 PRINTS PR00133 Glycosyl hydrolase family 3 signature 142 158 1.9E-32 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMIS_29470 491d6cdb626e2117a39d026c817f2ea3 731 Gene3D G3DSA:3.20.20.300 3 285 4.1E-109 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 AMIS_29470 491d6cdb626e2117a39d026c817f2ea3 731 SUPERFAMILY SSF52279 309 533 8.37E-51 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 AMIS_29470 491d6cdb626e2117a39d026c817f2ea3 731 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 29 279 1.8E-51 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMIS_36580 86a7726112c28465a23adef16bc2bfbb 599 Pfam PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain 368 526 6.3E-10 T 14-10-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 AMIS_36580 86a7726112c28465a23adef16bc2bfbb 599 Gene3D G3DSA:3.40.50.1820 36 259 6.2E-41 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_36580 86a7726112c28465a23adef16bc2bfbb 599 TIGRFAM TIGR00976 /NonD: hydrolase CocE/NonD family protein 63 583 3.9E-106 T 14-10-2018 IPR005674 CocE/Serine esterase GO:0016787 AMIS_36580 86a7726112c28465a23adef16bc2bfbb 599 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 66 330 3.6E-54 T 14-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 AMIS_36580 86a7726112c28465a23adef16bc2bfbb 599 Gene3D G3DSA:3.40.50.1820 265 415 4.2E-16 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_36580 86a7726112c28465a23adef16bc2bfbb 599 SMART SM00939 353 556 9.9E-12 T 14-10-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 AMIS_36580 86a7726112c28465a23adef16bc2bfbb 599 SUPERFAMILY SSF49785 379 529 9.57E-12 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_36580 86a7726112c28465a23adef16bc2bfbb 599 SUPERFAMILY SSF53474 49 379 2.01E-43 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_49500 7a5b94d163c35274e0d4c60c1b831714 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 596 614 4.8E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_49500 7a5b94d163c35274e0d4c60c1b831714 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 579 589 4.8E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_49500 7a5b94d163c35274e0d4c60c1b831714 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 620 633 4.8E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_49500 7a5b94d163c35274e0d4c60c1b831714 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 561 575 4.8E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_49500 7a5b94d163c35274e0d4c60c1b831714 646 SUPERFAMILY SSF55874 481 639 1.83E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_49500 7a5b94d163c35274e0d4c60c1b831714 646 Gene3D G3DSA:1.10.287.130 404 482 3.2E-17 T 14-10-2018 AMIS_49500 7a5b94d163c35274e0d4c60c1b831714 646 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 522 634 5.0E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_49500 7a5b94d163c35274e0d4c60c1b831714 646 Pfam PF00512 His Kinase A (phospho-acceptor) domain 416 479 3.3E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_49500 7a5b94d163c35274e0d4c60c1b831714 646 Pfam PF05227 CHASE3 domain 46 156 3.8E-16 T 14-10-2018 IPR007891 CHASE3 AMIS_49500 7a5b94d163c35274e0d4c60c1b831714 646 Gene3D G3DSA:1.20.1440.210 46 163 1.1E-13 T 14-10-2018 AMIS_49500 7a5b94d163c35274e0d4c60c1b831714 646 SUPERFAMILY SSF47384 398 479 7.26E-16 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_49500 7a5b94d163c35274e0d4c60c1b831714 646 Gene3D G3DSA:3.30.565.10 484 637 3.9E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_49500 7a5b94d163c35274e0d4c60c1b831714 646 SMART SM00388 413 480 5.0E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_49500 7a5b94d163c35274e0d4c60c1b831714 646 SMART SM00304 200 252 8.8E-4 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_49500 7a5b94d163c35274e0d4c60c1b831714 646 SMART SM00387 522 636 8.5E-35 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_29860 c488ec10ad238df115374e5f7deb45d5 1437 Pfam PF03752 Short repeats of unknown function 749 790 6.5E-15 T 14-10-2018 IPR005506 Protein of unknown function DUF312 AMIS_29860 c488ec10ad238df115374e5f7deb45d5 1437 Pfam PF03752 Short repeats of unknown function 86 124 7.6E-8 T 14-10-2018 IPR005506 Protein of unknown function DUF312 AMIS_29860 c488ec10ad238df115374e5f7deb45d5 1437 Pfam PF03752 Short repeats of unknown function 189 232 2.8E-8 T 14-10-2018 IPR005506 Protein of unknown function DUF312 AMIS_29860 c488ec10ad238df115374e5f7deb45d5 1437 Pfam PF03752 Short repeats of unknown function 130 156 2.4E-7 T 14-10-2018 IPR005506 Protein of unknown function DUF312 AMIS_29860 c488ec10ad238df115374e5f7deb45d5 1437 Pfam PF03752 Short repeats of unknown function 699 743 5.0E-12 T 14-10-2018 IPR005506 Protein of unknown function DUF312 AMIS_29860 c488ec10ad238df115374e5f7deb45d5 1437 Pfam PF03752 Short repeats of unknown function 41 74 6.3E-7 T 14-10-2018 IPR005506 Protein of unknown function DUF312 AMIS_29860 c488ec10ad238df115374e5f7deb45d5 1437 Pfam PF03752 Short repeats of unknown function 607 647 1.5E-10 T 14-10-2018 IPR005506 Protein of unknown function DUF312 AMIS_29860 c488ec10ad238df115374e5f7deb45d5 1437 Gene3D G3DSA:2.170.16.10 1160 1304 1.3E-40 T 14-10-2018 AMIS_29860 c488ec10ad238df115374e5f7deb45d5 1437 Pfam PF07591 Pretoxin HINT domain 1173 1304 1.1E-17 T 14-10-2018 AMIS_29860 c488ec10ad238df115374e5f7deb45d5 1437 SMART SM00306 1161 1262 3.6E-5 T 14-10-2018 IPR003587 Hint domain N-terminal Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AMIS_29860 c488ec10ad238df115374e5f7deb45d5 1437 SUPERFAMILY SSF51294 1163 1305 2.88E-19 T 14-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AMIS_47240 19446e4abcf9432a5e255c349dad1ce6 261 Pfam PF00005 ABC transporter 21 172 6.2E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_47240 19446e4abcf9432a5e255c349dad1ce6 261 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_47240 19446e4abcf9432a5e255c349dad1ce6 261 SUPERFAMILY SSF52540 7 244 9.41E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_47240 19446e4abcf9432a5e255c349dad1ce6 261 SMART SM00382 29 221 1.1E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_47240 19446e4abcf9432a5e255c349dad1ce6 261 Gene3D G3DSA:3.40.50.300 1 260 5.8E-68 T 14-10-2018 AMIS_47240 19446e4abcf9432a5e255c349dad1ce6 261 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 224 256 4.6E-6 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMIS_58330 194bae06ead0a0deda86d0913e760807 174 SUPERFAMILY SSF52540 31 73 2.79E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_58330 194bae06ead0a0deda86d0913e760807 174 Gene3D G3DSA:3.40.50.300 30 77 3.9E-6 T 14-10-2018 AMIS_27160 e7e74e12023e0d60165c0f2ab03627e2 169 Pfam PF01613 Flavin reductase like domain 22 166 1.3E-23 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 AMIS_27160 e7e74e12023e0d60165c0f2ab03627e2 169 Gene3D G3DSA:2.30.110.10 2 168 9.7E-35 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AMIS_27160 e7e74e12023e0d60165c0f2ab03627e2 169 SMART SM00903 21 165 1.9E-27 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 AMIS_27160 e7e74e12023e0d60165c0f2ab03627e2 169 SUPERFAMILY SSF50475 16 167 1.64E-32 T 14-10-2018 AMIS_74910 3b23af03a8b585fd833c6e04404af349 332 SUPERFAMILY SSF52374 1 325 3.51E-96 T 14-10-2018 AMIS_74910 3b23af03a8b585fd833c6e04404af349 332 Pfam PF00579 tRNA synthetases class I (W and Y) 1 280 2.6E-80 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMIS_74910 3b23af03a8b585fd833c6e04404af349 332 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 1 326 40.301 T 14-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 AMIS_74910 3b23af03a8b585fd833c6e04404af349 332 Gene3D G3DSA:3.40.50.620 1 324 1.7E-128 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMIS_74910 3b23af03a8b585fd833c6e04404af349 332 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 1 325 6.6E-107 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AMIS_74910 3b23af03a8b585fd833c6e04404af349 332 Gene3D G3DSA:1.10.240.10 183 293 1.7E-128 T 14-10-2018 AMIS_74910 3b23af03a8b585fd833c6e04404af349 332 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 12 28 4.1E-27 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AMIS_74910 3b23af03a8b585fd833c6e04404af349 332 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 192 202 4.1E-27 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AMIS_74910 3b23af03a8b585fd833c6e04404af349 332 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 62 81 4.1E-27 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AMIS_74910 3b23af03a8b585fd833c6e04404af349 332 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 139 160 4.1E-27 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AMIS_74910 3b23af03a8b585fd833c6e04404af349 332 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 7 17 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMIS_58000 d07b12b9f09f03afee0b9a473a97a554 188 Gene3D G3DSA:1.20.120.520 1 148 1.0E-11 T 14-10-2018 AMIS_58000 d07b12b9f09f03afee0b9a473a97a554 188 Pfam PF01814 Hemerythrin HHE cation binding domain 10 127 1.1E-15 T 14-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 AMIS_41610 ecc7b85b89ebdc3e44f4d4eaa5ec318a 318 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 21 93 4.5E-7 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AMIS_41610 ecc7b85b89ebdc3e44f4d4eaa5ec318a 318 Pfam PF00589 Phage integrase family 139 297 2.5E-22 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMIS_41610 ecc7b85b89ebdc3e44f4d4eaa5ec318a 318 Gene3D G3DSA:1.10.443.10 123 305 5.4E-36 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AMIS_41610 ecc7b85b89ebdc3e44f4d4eaa5ec318a 318 Gene3D G3DSA:1.10.150.130 10 102 8.1E-12 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal AMIS_41610 ecc7b85b89ebdc3e44f4d4eaa5ec318a 318 SUPERFAMILY SSF56349 10 305 8.83E-42 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMIS_31680 95080f9276f26acfed4051d1b175a329 907 ProSitePatterns PS00622 LuxR-type HTH domain signature. 856 883 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_31680 95080f9276f26acfed4051d1b175a329 907 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 872 884 7.0E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_31680 95080f9276f26acfed4051d1b175a329 907 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 842 856 7.0E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_31680 95080f9276f26acfed4051d1b175a329 907 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 856 872 7.0E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_31680 95080f9276f26acfed4051d1b175a329 907 Gene3D G3DSA:1.10.10.10 808 897 5.8E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_31680 95080f9276f26acfed4051d1b175a329 907 SUPERFAMILY SSF46894 834 895 2.21E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_31680 95080f9276f26acfed4051d1b175a329 907 Pfam PF13191 AAA ATPase domain 12 162 1.5E-13 T 14-10-2018 AMIS_31680 95080f9276f26acfed4051d1b175a329 907 Pfam PF00196 Bacterial regulatory proteins, luxR family 841 894 1.1E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_31680 95080f9276f26acfed4051d1b175a329 907 SUPERFAMILY SSF52540 12 225 4.38E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_31680 95080f9276f26acfed4051d1b175a329 907 Gene3D G3DSA:3.40.50.300 4 173 7.0E-9 T 14-10-2018 AMIS_31680 95080f9276f26acfed4051d1b175a329 907 SMART SM00421 839 896 1.2E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_3880 96d6307fe22a02da9bb434ee44408e73 374 PIRSF PIRSF000525 5 374 6.2E-72 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 AMIS_3880 96d6307fe22a02da9bb434ee44408e73 374 SUPERFAMILY SSF53383 15 373 2.86E-72 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_3880 96d6307fe22a02da9bb434ee44408e73 374 Pfam PF00266 Aminotransferase class-V 141 333 1.6E-14 T 14-10-2018 IPR000192 Aminotransferase class V domain AMIS_3880 96d6307fe22a02da9bb434ee44408e73 374 TIGRFAM TIGR01366 serC_3: putative phosphoserine aminotransferase 13 374 3.6E-164 T 14-10-2018 IPR006272 Phosphoserine aminotransferase, Mycobacterial-type GO:0004648|GO:0006564|GO:0009058 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52 AMIS_3880 96d6307fe22a02da9bb434ee44408e73 374 Gene3D G3DSA:3.40.640.10 33 268 7.4E-48 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_3880 96d6307fe22a02da9bb434ee44408e73 374 Gene3D G3DSA:3.90.1150.10 270 374 2.0E-38 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMIS_32000 68625a34cbf19abadc6e4dc98051812b 358 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 231 320 3.1E-23 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMIS_32000 68625a34cbf19abadc6e4dc98051812b 358 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 232 299 5.1E-15 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMIS_32000 68625a34cbf19abadc6e4dc98051812b 358 Pfam PF00005 ABC transporter 34 180 1.6E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_32000 68625a34cbf19abadc6e4dc98051812b 358 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_32000 68625a34cbf19abadc6e4dc98051812b 358 SMART SM00382 42 230 1.6E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_32000 68625a34cbf19abadc6e4dc98051812b 358 Gene3D G3DSA:3.40.50.300 3 334 7.0E-96 T 14-10-2018 AMIS_32000 68625a34cbf19abadc6e4dc98051812b 358 SUPERFAMILY SSF52540 41 308 3.41E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_36960 93e98396e553b8dfbfd2ebd7a991baff 145 SUPERFAMILY SSF54631 1 142 5.94E-31 T 14-10-2018 AMIS_36960 93e98396e553b8dfbfd2ebd7a991baff 145 SMART SM00116 13 61 2.1E-5 T 14-10-2018 IPR000644 CBS domain AMIS_36960 93e98396e553b8dfbfd2ebd7a991baff 145 SMART SM00116 79 126 2.0E-10 T 14-10-2018 IPR000644 CBS domain AMIS_36960 93e98396e553b8dfbfd2ebd7a991baff 145 Gene3D G3DSA:3.10.580.10 1 142 1.7E-40 T 14-10-2018 AMIS_36960 93e98396e553b8dfbfd2ebd7a991baff 145 Pfam PF00571 CBS domain 75 123 5.0E-9 T 14-10-2018 IPR000644 CBS domain AMIS_36960 93e98396e553b8dfbfd2ebd7a991baff 145 Pfam PF00571 CBS domain 13 61 1.9E-10 T 14-10-2018 IPR000644 CBS domain AMIS_10590 7fa770da577d0ab37f29a11e2f169e62 103 Pfam PF03992 Antibiotic biosynthesis monooxygenase 3 70 5.5E-18 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain AMIS_10590 7fa770da577d0ab37f29a11e2f169e62 103 Gene3D G3DSA:3.30.70.100 1 99 1.2E-38 T 14-10-2018 AMIS_10590 7fa770da577d0ab37f29a11e2f169e62 103 SUPERFAMILY SSF54909 1 97 7.04E-26 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel AMIS_38620 61c840f628dfcf970294edaaea34a39f 230 SMART SM00382 34 224 6.2E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_38620 61c840f628dfcf970294edaaea34a39f 230 Pfam PF00005 ABC transporter 25 175 3.9E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_38620 61c840f628dfcf970294edaaea34a39f 230 SUPERFAMILY SSF52540 5 226 1.29E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_38620 61c840f628dfcf970294edaaea34a39f 230 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_38620 61c840f628dfcf970294edaaea34a39f 230 Gene3D G3DSA:3.40.50.300 3 228 6.3E-63 T 14-10-2018 AMIS_72960 e89824cf8e202f695b5c49c3930509e9 385 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 93 223 5.0E-12 T 14-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like AMIS_45810 015b43521a4015b9c0b259d3acd1809e 255 Gene3D G3DSA:1.10.580.10 38 234 1.9E-21 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AMIS_45810 015b43521a4015b9c0b259d3acd1809e 255 Pfam PF00285 Citrate synthase, C-terminal domain 41 237 1.6E-21 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 AMIS_45810 015b43521a4015b9c0b259d3acd1809e 255 Gene3D G3DSA:1.10.230.10 104 208 1.9E-21 T 14-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain AMIS_45810 015b43521a4015b9c0b259d3acd1809e 255 SUPERFAMILY SSF48256 23 245 1.31E-39 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 AMIS_10840 7109ae6898b6246ef933623eb13e7303 202 TIGRFAM TIGR03086 TIGR03086: TIGR03086 family protein 11 185 2.1E-44 T 14-10-2018 IPR017520 Conserved hypothetical protein CHP03086 AMIS_10840 7109ae6898b6246ef933623eb13e7303 202 SUPERFAMILY SSF109854 8 136 5.04E-20 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes AMIS_10840 7109ae6898b6246ef933623eb13e7303 202 Pfam PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain 11 130 3.5E-13 T 14-10-2018 IPR024344 Mycothiol-dependent maleylpyruvate isomerase, metal-binding domain GO:0046872 AMIS_10840 7109ae6898b6246ef933623eb13e7303 202 Gene3D G3DSA:1.20.120.450 8 133 1.9E-12 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes AMIS_10840 7109ae6898b6246ef933623eb13e7303 202 TIGRFAM TIGR03083 TIGR03083: uncharacterized Actinobacterial protein TIGR03083 10 153 2.7E-22 T 14-10-2018 IPR017517 Conserved hypothetical protein CHP03083, actinobacterial-type AMIS_73490 50963742fa3f11c159e78a722258f384 1278 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1026 1266 2.7E-36 T 14-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type AMIS_73490 50963742fa3f11c159e78a722258f384 1278 SUPERFAMILY SSF52540 31 838 2.61E-88 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_73490 50963742fa3f11c159e78a722258f384 1278 Pfam PF13361 UvrD-like helicase C-terminal domain 678 814 2.5E-21 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AMIS_73490 50963742fa3f11c159e78a722258f384 1278 Gene3D G3DSA:3.40.50.300 457 837 2.3E-37 T 14-10-2018 AMIS_73490 50963742fa3f11c159e78a722258f384 1278 Gene3D G3DSA:1.10.10.160 133 151 4.1E-26 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily AMIS_73490 50963742fa3f11c159e78a722258f384 1278 Gene3D G3DSA:1.10.10.160 207 274 4.2E-21 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily AMIS_73490 50963742fa3f11c159e78a722258f384 1278 Gene3D G3DSA:3.40.50.300 275 357 4.2E-21 T 14-10-2018 AMIS_73490 50963742fa3f11c159e78a722258f384 1278 Gene3D G3DSA:3.40.50.300 32 132 4.1E-26 T 14-10-2018 AMIS_73490 50963742fa3f11c159e78a722258f384 1278 Pfam PF13245 AAA domain 38 342 6.7E-19 T 14-10-2018 AMIS_73490 50963742fa3f11c159e78a722258f384 1278 Gene3D G3DSA:1.10.486.10 522 708 2.3E-37 T 14-10-2018 AMIS_70990 84949e021f892b462d4f87a927316210 275 SUPERFAMILY SSF53474 15 272 5.17E-27 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_70990 84949e021f892b462d4f87a927316210 275 Pfam PF12697 Alpha/beta hydrolase family 17 264 1.0E-12 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_70990 84949e021f892b462d4f87a927316210 275 Gene3D G3DSA:3.40.50.1820 14 274 5.1E-27 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_30900 73c9cf385c6be5a86e93c581d1a2d899 261 SUPERFAMILY SSF109854 9 151 4.58E-19 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes AMIS_30900 73c9cf385c6be5a86e93c581d1a2d899 261 Gene3D G3DSA:1.20.120.450 4 152 8.2E-23 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes AMIS_30900 73c9cf385c6be5a86e93c581d1a2d899 261 Pfam PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain 12 147 7.9E-14 T 14-10-2018 IPR024344 Mycothiol-dependent maleylpyruvate isomerase, metal-binding domain GO:0046872 AMIS_30900 73c9cf385c6be5a86e93c581d1a2d899 261 TIGRFAM TIGR03083 TIGR03083: uncharacterized Actinobacterial protein TIGR03083 12 233 3.6E-22 T 14-10-2018 IPR017517 Conserved hypothetical protein CHP03083, actinobacterial-type AMIS_55190 b5756655a7e47d279b0b040209916c0b 155 SUPERFAMILY SSF46785 11 70 3.34E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_55190 b5756655a7e47d279b0b040209916c0b 155 Pfam PF13412 Winged helix-turn-helix DNA-binding 11 58 1.9E-15 T 14-10-2018 AMIS_55190 b5756655a7e47d279b0b040209916c0b 155 SUPERFAMILY SSF54909 73 151 8.58E-16 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel AMIS_55190 b5756655a7e47d279b0b040209916c0b 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 11 27 1.7E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMIS_55190 b5756655a7e47d279b0b040209916c0b 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 27 38 1.7E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMIS_55190 b5756655a7e47d279b0b040209916c0b 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 38 57 1.7E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMIS_55190 b5756655a7e47d279b0b040209916c0b 155 Gene3D G3DSA:1.10.10.10 14 63 5.8E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_55190 b5756655a7e47d279b0b040209916c0b 155 SMART SM00344 11 120 1.2E-38 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AMIS_55190 b5756655a7e47d279b0b040209916c0b 155 Gene3D G3DSA:3.30.70.920 64 147 1.4E-21 T 14-10-2018 AMIS_55190 b5756655a7e47d279b0b040209916c0b 155 Pfam PF01037 Lrp/AsnC ligand binding domain 78 150 6.5E-17 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMIS_47840 40b8f3707cb8c3b06bc3c7ad8c2042ed 192 Gene3D G3DSA:3.40.50.300 6 178 7.6E-21 T 14-10-2018 AMIS_47840 40b8f3707cb8c3b06bc3c7ad8c2042ed 192 SUPERFAMILY SSF52540 10 157 5.33E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_3900 c2fbd721e9e2980c281ff5eefeedf652 223 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 14 223 38.655 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AMIS_3900 c2fbd721e9e2980c281ff5eefeedf652 223 SUPERFAMILY SSF50475 17 223 1.59E-62 T 14-10-2018 AMIS_3900 c2fbd721e9e2980c281ff5eefeedf652 223 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 10 223 4.3E-76 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AMIS_3900 c2fbd721e9e2980c281ff5eefeedf652 223 Gene3D G3DSA:2.30.110.10 11 223 4.6E-79 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AMIS_3900 c2fbd721e9e2980c281ff5eefeedf652 223 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 187 200 - T 14-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AMIS_3900 c2fbd721e9e2980c281ff5eefeedf652 223 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 45 124 1.2E-22 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AMIS_3900 c2fbd721e9e2980c281ff5eefeedf652 223 PIRSF PIRSF000190 2 223 1.2E-77 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AMIS_3900 c2fbd721e9e2980c281ff5eefeedf652 223 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 177 223 5.1E-21 T 14-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AMIS_8960 068e4216ac4bdd04c59667f8b6896257 268 Hamap MF_01963 S-methyl-5'-thioadenosine phosphorylase [mtnP]. 8 263 42.759 T 14-10-2018 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 Reactome: R-HSA-1237112|Reactome: R-HSA-8950505 AMIS_8960 068e4216ac4bdd04c59667f8b6896257 268 TIGRFAM TIGR01694 MTAP: methylthioadenosine phosphorylase 10 244 1.7E-94 T 14-10-2018 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 Reactome: R-HSA-1237112|Reactome: R-HSA-8950505 AMIS_8960 068e4216ac4bdd04c59667f8b6896257 268 Pfam PF01048 Phosphorylase superfamily 10 242 1.8E-40 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AMIS_8960 068e4216ac4bdd04c59667f8b6896257 268 Gene3D G3DSA:3.40.50.1580 5 264 6.4E-90 T 14-10-2018 AMIS_8960 068e4216ac4bdd04c59667f8b6896257 268 SUPERFAMILY SSF53167 9 261 1.67E-83 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 AMIS_52990 ddd22739d7df1b8cdcce4b46edc5eda4 468 SMART SM00387 356 467 1.1E-31 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_52990 ddd22739d7df1b8cdcce4b46edc5eda4 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 451 464 5.4E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_52990 ddd22739d7df1b8cdcce4b46edc5eda4 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 394 408 5.4E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_52990 ddd22739d7df1b8cdcce4b46edc5eda4 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 427 445 5.4E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_52990 ddd22739d7df1b8cdcce4b46edc5eda4 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 422 5.4E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_52990 ddd22739d7df1b8cdcce4b46edc5eda4 468 SMART SM00388 242 316 1.3E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_52990 ddd22739d7df1b8cdcce4b46edc5eda4 468 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 358 465 2.9E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_52990 ddd22739d7df1b8cdcce4b46edc5eda4 468 Gene3D G3DSA:3.30.565.10 319 467 1.9E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_52990 ddd22739d7df1b8cdcce4b46edc5eda4 468 SUPERFAMILY SSF55874 307 464 4.32E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_52990 ddd22739d7df1b8cdcce4b46edc5eda4 468 Pfam PF00672 HAMP domain 183 237 1.0E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_52990 ddd22739d7df1b8cdcce4b46edc5eda4 468 SMART SM00304 183 241 4.1E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_52990 ddd22739d7df1b8cdcce4b46edc5eda4 468 Pfam PF00512 His Kinase A (phospho-acceptor) domain 243 315 1.5E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_52990 ddd22739d7df1b8cdcce4b46edc5eda4 468 Gene3D G3DSA:1.10.287.130 187 317 3.3E-21 T 14-10-2018 AMIS_52990 ddd22739d7df1b8cdcce4b46edc5eda4 468 SUPERFAMILY SSF47384 225 315 4.12E-11 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_49680 76aa9095cff3796cd85d2b1d6a1e4a3a 629 Gene3D G3DSA:3.80.30.20 181 384 1.0E-6 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe AMIS_49680 76aa9095cff3796cd85d2b1d6a1e4a3a 629 SUPERFAMILY SSF102114 183 383 5.36E-20 T 14-10-2018 AMIS_49680 76aa9095cff3796cd85d2b1d6a1e4a3a 629 SMART SM00729 183 398 0.0089 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AMIS_39880 40bf53eb2ebe263a770c4d1bf217939f 304 Gene3D G3DSA:3.40.50.720 6 297 1.5E-68 T 14-10-2018 AMIS_39880 40bf53eb2ebe263a770c4d1bf217939f 304 SUPERFAMILY SSF54373 172 260 2.88E-19 T 14-10-2018 AMIS_39880 40bf53eb2ebe263a770c4d1bf217939f 304 Pfam PF01266 FAD dependent oxidoreductase 6 298 7.7E-32 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AMIS_39880 40bf53eb2ebe263a770c4d1bf217939f 304 Gene3D G3DSA:3.30.9.10 82 259 1.5E-68 T 14-10-2018 AMIS_39880 40bf53eb2ebe263a770c4d1bf217939f 304 SUPERFAMILY SSF51971 5 300 2.24E-28 T 14-10-2018 AMIS_69160 1c32c28e5e45bc4cc73cc904a38f0d6e 743 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 135 147 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 AMIS_69160 1c32c28e5e45bc4cc73cc904a38f0d6e 743 Pfam PF00069 Protein kinase domain 12 262 5.9E-45 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMIS_69160 1c32c28e5e45bc4cc73cc904a38f0d6e 743 SUPERFAMILY SSF56112 8 269 1.32E-67 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMIS_69160 1c32c28e5e45bc4cc73cc904a38f0d6e 743 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 18 41 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 AMIS_69160 1c32c28e5e45bc4cc73cc904a38f0d6e 743 PRINTS PR01217 Proline rich extensin signature 424 445 8.2E-9 T 14-10-2018 AMIS_69160 1c32c28e5e45bc4cc73cc904a38f0d6e 743 PRINTS PR01217 Proline rich extensin signature 445 461 8.2E-9 T 14-10-2018 AMIS_69160 1c32c28e5e45bc4cc73cc904a38f0d6e 743 PRINTS PR01217 Proline rich extensin signature 504 529 8.2E-9 T 14-10-2018 AMIS_69160 1c32c28e5e45bc4cc73cc904a38f0d6e 743 PRINTS PR01217 Proline rich extensin signature 347 363 8.2E-9 T 14-10-2018 AMIS_69160 1c32c28e5e45bc4cc73cc904a38f0d6e 743 Gene3D G3DSA:3.30.200.20 2 95 1.9E-29 T 14-10-2018 AMIS_69160 1c32c28e5e45bc4cc73cc904a38f0d6e 743 Gene3D G3DSA:1.10.510.10 98 282 5.9E-40 T 14-10-2018 AMIS_69160 1c32c28e5e45bc4cc73cc904a38f0d6e 743 SMART SM00220 12 267 9.5E-59 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMIS_68960 70e61a6aadd8591f310b024213425a79 486 SUPERFAMILY SSF53223 89 238 1.73E-54 T 14-10-2018 AMIS_68960 70e61a6aadd8591f310b024213425a79 486 SMART SM00919 240 462 1.8E-111 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AMIS_68960 70e61a6aadd8591f310b024213425a79 486 Gene3D G3DSA:3.40.50.720 238 465 1.7E-72 T 14-10-2018 AMIS_68960 70e61a6aadd8591f310b024213425a79 486 Gene3D G3DSA:3.40.50.10380 76 237 8.6E-70 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 AMIS_68960 70e61a6aadd8591f310b024213425a79 486 SUPERFAMILY SSF51735 240 460 7.58E-70 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_68960 70e61a6aadd8591f310b024213425a79 486 Pfam PF03949 Malic enzyme, NAD binding domain 242 456 4.5E-24 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AMIS_68960 70e61a6aadd8591f310b024213425a79 486 SMART SM01274 95 228 1.1E-81 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AMIS_68960 70e61a6aadd8591f310b024213425a79 486 PIRSF PIRSF000106 79 469 4.0E-79 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AMIS_68960 70e61a6aadd8591f310b024213425a79 486 Pfam PF00390 Malic enzyme, N-terminal domain 96 228 6.5E-29 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AMIS_44090 e29fa26c432caaba0738b21aa589775e 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 61 1.4E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_44090 e29fa26c432caaba0738b21aa589775e 212 SUPERFAMILY SSF46689 4 81 2.26E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_44090 e29fa26c432caaba0738b21aa589775e 212 SUPERFAMILY SSF48498 84 195 1.23E-16 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_44090 e29fa26c432caaba0738b21aa589775e 212 Gene3D G3DSA:1.10.357.10 12 199 2.1E-29 T 14-10-2018 AMIS_27570 e735316cc41780b1deed1ca65d7f6cc7 426 Pfam PF00144 Beta-lactamase 67 359 3.9E-66 T 14-10-2018 IPR001466 Beta-lactamase-related AMIS_27570 e735316cc41780b1deed1ca65d7f6cc7 426 SUPERFAMILY SSF56601 50 362 3.81E-78 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMIS_27570 e735316cc41780b1deed1ca65d7f6cc7 426 Gene3D G3DSA:3.40.710.10 49 384 3.6E-98 T 14-10-2018 AMIS_39390 9475db39aa06edc78414d7276c028b52 232 SUPERFAMILY SSF53335 3 209 1.37E-41 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_39390 9475db39aa06edc78414d7276c028b52 232 Pfam PF08241 Methyltransferase domain 44 136 9.5E-23 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 AMIS_39390 9475db39aa06edc78414d7276c028b52 232 Gene3D G3DSA:3.40.50.150 2 212 3.8E-48 T 14-10-2018 AMIS_33880 bd113c2f3d0be777c2592f7d80df84d1 539 Pfam PF08448 PAS fold 182 298 2.5E-5 T 14-10-2018 IPR013656 PAS fold-4 AMIS_33880 bd113c2f3d0be777c2592f7d80df84d1 539 Gene3D G3DSA:3.30.450.20 166 292 5.9E-13 T 14-10-2018 AMIS_33880 bd113c2f3d0be777c2592f7d80df84d1 539 SUPERFAMILY SSF55785 172 295 6.46E-11 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_33880 bd113c2f3d0be777c2592f7d80df84d1 539 SUPERFAMILY SSF55781 24 167 8.24E-17 T 14-10-2018 AMIS_33880 bd113c2f3d0be777c2592f7d80df84d1 539 SUPERFAMILY SSF47384 309 386 2.16E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_33880 bd113c2f3d0be777c2592f7d80df84d1 539 Gene3D G3DSA:1.10.287.130 293 385 1.1E-15 T 14-10-2018 AMIS_33880 bd113c2f3d0be777c2592f7d80df84d1 539 SUPERFAMILY SSF55874 379 538 4.32E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_33880 bd113c2f3d0be777c2592f7d80df84d1 539 SMART SM00388 324 388 6.2E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_33880 bd113c2f3d0be777c2592f7d80df84d1 539 Pfam PF00512 His Kinase A (phospho-acceptor) domain 325 387 1.7E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_33880 bd113c2f3d0be777c2592f7d80df84d1 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 469 483 2.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_33880 bd113c2f3d0be777c2592f7d80df84d1 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 501 519 2.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_33880 bd113c2f3d0be777c2592f7d80df84d1 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 525 538 2.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_33880 bd113c2f3d0be777c2592f7d80df84d1 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 487 497 2.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_33880 bd113c2f3d0be777c2592f7d80df84d1 539 Gene3D G3DSA:3.30.565.10 390 538 1.4E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_33880 bd113c2f3d0be777c2592f7d80df84d1 539 Gene3D G3DSA:3.30.450.40 2 165 5.1E-12 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_33880 bd113c2f3d0be777c2592f7d80df84d1 539 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 431 538 6.8E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_33880 bd113c2f3d0be777c2592f7d80df84d1 539 SMART SM00387 430 539 2.1E-31 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_32550 9ff0d11808ac08aa48b33f96469efa60 283 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 2 282 2.5E-95 T 14-10-2018 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-6798695|Reactome: R-HSA-964975 AMIS_32550 9ff0d11808ac08aa48b33f96469efa60 283 Gene3D G3DSA:3.40.1190.20 1 283 2.0E-82 T 14-10-2018 IPR029056 Ribokinase-like AMIS_32550 9ff0d11808ac08aa48b33f96469efa60 283 SUPERFAMILY SSF53613 2 277 1.87E-66 T 14-10-2018 IPR029056 Ribokinase-like AMIS_32550 9ff0d11808ac08aa48b33f96469efa60 283 Pfam PF08543 Phosphomethylpyrimidine kinase 91 258 8.3E-16 T 14-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 AMIS_4310 de584e013b91acd43e044030741806c9 119 TIGRFAM TIGR00494 crcB: protein CrcB 4 115 2.6E-25 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AMIS_4310 de584e013b91acd43e044030741806c9 119 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 3 116 18.451 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AMIS_4310 de584e013b91acd43e044030741806c9 119 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 4 111 5.0E-26 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AMIS_1870 3044e360c1d7c365173aadd4e8def4b8 218 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 10 193 6.7E-34 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AMIS_1870 3044e360c1d7c365173aadd4e8def4b8 218 SMART SM00855 8 160 3.0E-17 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AMIS_1870 3044e360c1d7c365173aadd4e8def4b8 218 SUPERFAMILY SSF53254 7 198 4.45E-37 T 14-10-2018 IPR029033 Histidine phosphatase superfamily AMIS_1870 3044e360c1d7c365173aadd4e8def4b8 218 Gene3D G3DSA:3.40.50.1240 4 203 1.0E-28 T 14-10-2018 IPR029033 Histidine phosphatase superfamily AMIS_52490 6b8f2f4fc7129d2940f0c3643cfe966b 249 SMART SM00382 39 225 1.1E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_52490 6b8f2f4fc7129d2940f0c3643cfe966b 249 SUPERFAMILY SSF52540 14 231 2.88E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_52490 6b8f2f4fc7129d2940f0c3643cfe966b 249 Gene3D G3DSA:3.40.50.300 10 247 7.0E-65 T 14-10-2018 AMIS_52490 6b8f2f4fc7129d2940f0c3643cfe966b 249 Pfam PF00005 ABC transporter 30 176 1.1E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_52490 6b8f2f4fc7129d2940f0c3643cfe966b 249 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_39170 009fbf887b7a5ffb4147e0f881fddfb1 428 Gene3D G3DSA:1.20.1250.20 6 400 6.6E-46 T 14-10-2018 AMIS_39170 009fbf887b7a5ffb4147e0f881fddfb1 428 Pfam PF07690 Major Facilitator Superfamily 16 322 1.9E-25 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_39170 009fbf887b7a5ffb4147e0f881fddfb1 428 SUPERFAMILY SSF103473 8 399 5.23E-46 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_39170 009fbf887b7a5ffb4147e0f881fddfb1 428 PRINTS PR01035 Tetracycline resistance protein signature 349 372 3.1E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMIS_39170 009fbf887b7a5ffb4147e0f881fddfb1 428 PRINTS PR01035 Tetracycline resistance protein signature 165 185 3.1E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMIS_39170 009fbf887b7a5ffb4147e0f881fddfb1 428 PRINTS PR01035 Tetracycline resistance protein signature 21 37 3.1E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMIS_39170 009fbf887b7a5ffb4147e0f881fddfb1 428 PRINTS PR01035 Tetracycline resistance protein signature 137 159 3.1E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMIS_25850 22e04ad95c4a41277c8f0c99fef98ae2 514 SUPERFAMILY SSF53474 212 475 1.4E-9 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_25850 22e04ad95c4a41277c8f0c99fef98ae2 514 Pfam PF07519 Tannase and feruloyl esterase 93 511 3.0E-86 T 14-10-2018 IPR011118 Tannase/feruloyl esterase MetaCyc: PWY-6784 AMIS_80110 2d3afaa8e9938fc4366e65c79d81e931 174 Gene3D G3DSA:2.40.100.10 3 172 1.0E-69 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily AMIS_80110 2d3afaa8e9938fc4366e65c79d81e931 174 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 7 170 1.5E-43 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AMIS_80110 2d3afaa8e9938fc4366e65c79d81e931 174 PIRSF PIRSF001467 1 174 1.3E-52 T 14-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 AMIS_80110 2d3afaa8e9938fc4366e65c79d81e931 174 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 116 128 7.9E-23 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AMIS_80110 2d3afaa8e9938fc4366e65c79d81e931 174 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 20 35 7.9E-23 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AMIS_80110 2d3afaa8e9938fc4366e65c79d81e931 174 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 61 73 7.9E-23 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AMIS_80110 2d3afaa8e9938fc4366e65c79d81e931 174 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 129 144 7.9E-23 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AMIS_80110 2d3afaa8e9938fc4366e65c79d81e931 174 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 101 116 7.9E-23 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AMIS_80110 2d3afaa8e9938fc4366e65c79d81e931 174 SUPERFAMILY SSF50891 6 170 3.8E-59 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily AMIS_45290 fd5ef0f31be94f74ce1c488706da7372 383 SUPERFAMILY SSF51905 4 376 2.5E-36 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_45290 fd5ef0f31be94f74ce1c488706da7372 383 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 9.3E-8 T 14-10-2018 AMIS_45290 fd5ef0f31be94f74ce1c488706da7372 383 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 151 160 9.3E-8 T 14-10-2018 AMIS_45290 fd5ef0f31be94f74ce1c488706da7372 383 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 190 215 9.3E-8 T 14-10-2018 AMIS_45290 fd5ef0f31be94f74ce1c488706da7372 383 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 328 8.8E-15 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMIS_45290 fd5ef0f31be94f74ce1c488706da7372 383 Gene3D G3DSA:3.50.50.60 1 370 1.3E-98 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_45290 fd5ef0f31be94f74ce1c488706da7372 383 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 3.0E-9 T 14-10-2018 AMIS_45290 fd5ef0f31be94f74ce1c488706da7372 383 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 298 314 3.0E-9 T 14-10-2018 AMIS_45290 fd5ef0f31be94f74ce1c488706da7372 383 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 190 208 3.0E-9 T 14-10-2018 AMIS_780 6f002ff5098a5f2addb3fb92939beae3 380 Gene3D G3DSA:3.40.50.970 3 368 2.5E-106 T 14-10-2018 AMIS_780 6f002ff5098a5f2addb3fb92939beae3 380 TIGRFAM TIGR03181 PDH_E1_alph_x: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 19 367 4.7E-127 T 14-10-2018 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 AMIS_780 6f002ff5098a5f2addb3fb92939beae3 380 Pfam PF00676 Dehydrogenase E1 component 57 326 1.6E-68 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 AMIS_780 6f002ff5098a5f2addb3fb92939beae3 380 SUPERFAMILY SSF52518 40 368 2.62E-91 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold AMIS_49980 6e0b5ddfaf2eeb0cf7aa334ee54dc4dd 345 Gene3D G3DSA:1.20.144.10 165 258 2.4E-5 T 14-10-2018 AMIS_49980 6e0b5ddfaf2eeb0cf7aa334ee54dc4dd 345 Pfam PF14378 PAP2 superfamily 60 240 1.8E-36 T 14-10-2018 IPR026841 Inositolphosphotransferase Aur1/Ipt1 AMIS_13550 93e0180ecda58ccbaa9328a3515cff60 261 Gene3D G3DSA:3.40.50.880 2 236 1.1E-51 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_13550 93e0180ecda58ccbaa9328a3515cff60 261 SUPERFAMILY SSF52317 16 206 2.45E-30 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_13550 93e0180ecda58ccbaa9328a3515cff60 261 Pfam PF00117 Glutamine amidotransferase class-I 67 186 6.1E-8 T 14-10-2018 IPR017926 Glutamine amidotransferase AMIS_40910 c54f9361411e9b5ac8d168ba94591c1d 158 Gene3D G3DSA:3.40.630.30 1 139 2.9E-18 T 14-10-2018 AMIS_40910 c54f9361411e9b5ac8d168ba94591c1d 158 Pfam PF13508 Acetyltransferase (GNAT) domain 51 125 5.3E-11 T 14-10-2018 IPR000182 GNAT domain AMIS_40910 c54f9361411e9b5ac8d168ba94591c1d 158 SUPERFAMILY SSF55729 1 129 8.37E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_49580 2f9cd53dd096ecdc98d41eb41eaa82f5 129 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 4 81 2.0E-10 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AMIS_49580 2f9cd53dd096ecdc98d41eb41eaa82f5 129 TIGRFAM TIGR03618 Rv1155_F420: PPOX class probable F420-dependent enzyme 8 127 2.7E-24 T 14-10-2018 IPR019920 F420-binding domain, putative AMIS_49580 2f9cd53dd096ecdc98d41eb41eaa82f5 129 SUPERFAMILY SSF50475 3 128 5.0E-21 T 14-10-2018 AMIS_49580 2f9cd53dd096ecdc98d41eb41eaa82f5 129 Gene3D G3DSA:2.30.110.10 1 128 2.3E-24 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AMIS_19000 e5179848d51b8887101bc99bf3177ac9 529 SUPERFAMILY SSF51905 1 527 1.14E-29 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_19000 e5179848d51b8887101bc99bf3177ac9 529 Gene3D G3DSA:3.90.700.10 316 459 2.6E-143 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMIS_19000 e5179848d51b8887101bc99bf3177ac9 529 Pfam PF00890 FAD binding domain 1 511 3.7E-73 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMIS_19000 e5179848d51b8887101bc99bf3177ac9 529 SUPERFAMILY SSF56425 295 464 2.38E-35 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMIS_19000 e5179848d51b8887101bc99bf3177ac9 529 Gene3D G3DSA:3.50.50.60 1 522 2.6E-143 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_71880 29f327b388ac4cfed09b2dbb457abb6b 276 Gene3D G3DSA:3.10.310.10 5 268 7.0E-85 T 14-10-2018 AMIS_71880 29f327b388ac4cfed09b2dbb457abb6b 276 Gene3D G3DSA:3.10.310.10 124 264 7.0E-85 T 14-10-2018 AMIS_71880 29f327b388ac4cfed09b2dbb457abb6b 276 PIRSF PIRSF016184 1 276 1.8E-53 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AMIS_71880 29f327b388ac4cfed09b2dbb457abb6b 276 SUPERFAMILY SSF54506 2 274 6.68E-73 T 14-10-2018 AMIS_71880 29f327b388ac4cfed09b2dbb457abb6b 276 Pfam PF02567 Phenazine biosynthesis-like protein 6 272 7.6E-64 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AMIS_71880 29f327b388ac4cfed09b2dbb457abb6b 276 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 4 274 9.2E-39 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AMIS_44830 e0ff70f990ce02034c9e8e4fd471c99a 131 Gene3D G3DSA:2.60.40.2880 37 130 1.1E-7 T 14-10-2018 IPR038468 Transport accessory protein MmpS, soluble domain superfamily AMIS_44830 e0ff70f990ce02034c9e8e4fd471c99a 131 Pfam PF05423 Mycobacterium membrane protein 38 113 7.2E-6 T 14-10-2018 IPR008693 Transport accessory protein MmpS AMIS_31910 cf6f0c1995e7ce5f949628f019a456dd 363 SUPERFAMILY SSF55874 213 357 2.36E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_31910 cf6f0c1995e7ce5f949628f019a456dd 363 SUPERFAMILY SSF158472 89 137 3.53E-6 T 14-10-2018 AMIS_31910 cf6f0c1995e7ce5f949628f019a456dd 363 PRINTS PR00344 Bacterial sensor protein C-terminal signature 303 313 4.0E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_31910 cf6f0c1995e7ce5f949628f019a456dd 363 PRINTS PR00344 Bacterial sensor protein C-terminal signature 285 299 4.0E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_31910 cf6f0c1995e7ce5f949628f019a456dd 363 PRINTS PR00344 Bacterial sensor protein C-terminal signature 320 338 4.0E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_31910 cf6f0c1995e7ce5f949628f019a456dd 363 SMART SM00387 251 360 2.5E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_31910 cf6f0c1995e7ce5f949628f019a456dd 363 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 254 358 2.7E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_31910 cf6f0c1995e7ce5f949628f019a456dd 363 Pfam PF00672 HAMP domain 92 137 5.4E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_31910 cf6f0c1995e7ce5f949628f019a456dd 363 Gene3D G3DSA:3.30.565.10 206 358 1.1E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_31910 cf6f0c1995e7ce5f949628f019a456dd 363 Pfam PF00512 His Kinase A (phospho-acceptor) domain 143 208 1.7E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_31910 cf6f0c1995e7ce5f949628f019a456dd 363 SUPERFAMILY SSF47384 126 208 1.59E-12 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_31910 cf6f0c1995e7ce5f949628f019a456dd 363 SMART SM00388 143 209 4.6E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_31910 cf6f0c1995e7ce5f949628f019a456dd 363 SMART SM00304 89 142 1.4E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_31910 cf6f0c1995e7ce5f949628f019a456dd 363 Gene3D G3DSA:1.10.287.130 93 205 2.7E-21 T 14-10-2018 AMIS_37120 63081b340861e77f5ff048689a42f1df 147 Gene3D G3DSA:1.10.260.40 2 75 1.3E-19 T 14-10-2018 AMIS_37120 63081b340861e77f5ff048689a42f1df 147 SUPERFAMILY SSF47413 3 70 8.32E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_37120 63081b340861e77f5ff048689a42f1df 147 SMART SM00530 11 66 3.0E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMIS_37120 63081b340861e77f5ff048689a42f1df 147 Pfam PF13560 Helix-turn-helix domain 8 69 8.0E-16 T 14-10-2018 AMIS_22880 d8c3ae0b778363fbe86d4ea686ee6ded 417 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 26 125 1.9E-32 T 14-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AMIS_22880 d8c3ae0b778363fbe86d4ea686ee6ded 417 SUPERFAMILY SSF54826 18 127 1.15E-32 T 14-10-2018 AMIS_22880 d8c3ae0b778363fbe86d4ea686ee6ded 417 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 100 125 - T 14-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 AMIS_22880 d8c3ae0b778363fbe86d4ea686ee6ded 417 SUPERFAMILY SSF51604 113 400 3.03E-78 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AMIS_22880 d8c3ae0b778363fbe86d4ea686ee6ded 417 Pfam PF13378 Enolase C-terminal domain-like 201 392 3.2E-44 T 14-10-2018 IPR029065 Enolase C-terminal domain-like AMIS_22880 d8c3ae0b778363fbe86d4ea686ee6ded 417 Gene3D G3DSA:3.30.390.10 21 413 2.4E-167 T 14-10-2018 IPR029017 Enolase-like, N-terminal AMIS_22880 d8c3ae0b778363fbe86d4ea686ee6ded 417 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 222 253 - T 14-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 AMIS_22880 d8c3ae0b778363fbe86d4ea686ee6ded 417 SMART SM00922 143 272 1.4E-18 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AMIS_22880 d8c3ae0b778363fbe86d4ea686ee6ded 417 Gene3D G3DSA:3.20.20.120 120 381 2.4E-167 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AMIS_9420 5f52ae1b08f1bd7b254fee4b8afd90fc 105 TIGRFAM TIGR01687 moaD_arch: MoaD family protein 3 91 9.5E-14 T 14-10-2018 IPR010038 MoaD, archaeal-type AMIS_9420 5f52ae1b08f1bd7b254fee4b8afd90fc 105 Gene3D G3DSA:3.10.20.30 1 91 8.4E-27 T 14-10-2018 IPR012675 Beta-grasp domain superfamily AMIS_9420 5f52ae1b08f1bd7b254fee4b8afd90fc 105 Pfam PF02597 ThiS family 5 91 3.6E-19 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 AMIS_9420 5f52ae1b08f1bd7b254fee4b8afd90fc 105 SUPERFAMILY SSF54285 1 91 1.21E-24 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AMIS_64290 aa841e344d2769a744e06230211773f2 524 Gene3D G3DSA:3.40.50.300 219 381 2.2E-39 T 14-10-2018 AMIS_64290 aa841e344d2769a744e06230211773f2 524 SMART SM00487 21 223 7.7E-48 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMIS_64290 aa841e344d2769a744e06230211773f2 524 Gene3D G3DSA:3.40.50.300 1 211 1.9E-66 T 14-10-2018 AMIS_64290 aa841e344d2769a744e06230211773f2 524 SUPERFAMILY SSF52540 75 355 6.38E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_64290 aa841e344d2769a744e06230211773f2 524 Pfam PF00271 Helicase conserved C-terminal domain 235 338 1.6E-22 T 14-10-2018 IPR001650 Helicase, C-terminal AMIS_64290 aa841e344d2769a744e06230211773f2 524 SMART SM00490 257 338 3.4E-23 T 14-10-2018 IPR001650 Helicase, C-terminal AMIS_64290 aa841e344d2769a744e06230211773f2 524 Pfam PF00270 DEAD/DEAH box helicase 26 194 1.7E-43 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMIS_39740 1a803b33b1a338d9861796de88f0f690 186 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 56 1.4E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_39740 1a803b33b1a338d9861796de88f0f690 186 Gene3D G3DSA:1.10.357.10 1 185 1.7E-44 T 14-10-2018 AMIS_39740 1a803b33b1a338d9861796de88f0f690 186 SUPERFAMILY SSF48498 82 186 1.78E-9 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_39740 1a803b33b1a338d9861796de88f0f690 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 5.9E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_39740 1a803b33b1a338d9861796de88f0f690 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 5.9E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_39740 1a803b33b1a338d9861796de88f0f690 186 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 85 186 4.0E-10 T 14-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal AMIS_39740 1a803b33b1a338d9861796de88f0f690 186 SUPERFAMILY SSF46689 2 81 1.69E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_4280 7f3e7ad9843b54279da648b12b231ad3 440 Gene3D G3DSA:3.30.565.10 323 440 4.7E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_4280 7f3e7ad9843b54279da648b12b231ad3 440 Pfam PF13796 Putative sensor 34 218 1.5E-41 T 14-10-2018 IPR025828 Putative sensor domain AMIS_4280 7f3e7ad9843b54279da648b12b231ad3 440 SUPERFAMILY SSF55874 324 439 1.92E-14 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_4280 7f3e7ad9843b54279da648b12b231ad3 440 Pfam PF07730 Histidine kinase 255 317 5.9E-12 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMIS_28710 ee9a1aa3d64e486fecb38411b697491e 504 Gene3D G3DSA:3.40.30.120 383 500 2.0E-8 T 14-10-2018 AMIS_28710 ee9a1aa3d64e486fecb38411b697491e 504 SUPERFAMILY SSF51905 1 352 6.15E-57 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_28710 ee9a1aa3d64e486fecb38411b697491e 504 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 285 300 5.7E-30 T 14-10-2018 AMIS_28710 ee9a1aa3d64e486fecb38411b697491e 504 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 5.7E-30 T 14-10-2018 AMIS_28710 ee9a1aa3d64e486fecb38411b697491e 504 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 300 316 5.7E-30 T 14-10-2018 AMIS_28710 ee9a1aa3d64e486fecb38411b697491e 504 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 159 174 5.7E-30 T 14-10-2018 AMIS_28710 ee9a1aa3d64e486fecb38411b697491e 504 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 335 351 5.7E-30 T 14-10-2018 AMIS_28710 ee9a1aa3d64e486fecb38411b697491e 504 SUPERFAMILY SSF52833 382 502 6.49E-6 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMIS_28710 ee9a1aa3d64e486fecb38411b697491e 504 Pfam PF01494 FAD binding domain 3 347 1.3E-72 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 AMIS_28710 ee9a1aa3d64e486fecb38411b697491e 504 Gene3D G3DSA:3.50.50.60 4 347 2.8E-98 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_28710 ee9a1aa3d64e486fecb38411b697491e 504 Gene3D G3DSA:3.30.70.2450 189 274 2.8E-98 T 14-10-2018 AMIS_52570 b1f210c69e4a15a486ffe00a6105d78c 254 Gene3D G3DSA:2.70.50.50 29 170 4.3E-48 T 14-10-2018 AMIS_52570 b1f210c69e4a15a486ffe00a6105d78c 254 SMART SM00495 208 254 4.9E-10 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AMIS_52570 b1f210c69e4a15a486ffe00a6105d78c 254 SUPERFAMILY SSF81296 29 171 1.15E-33 T 14-10-2018 IPR014756 Immunoglobulin E-set AMIS_52570 b1f210c69e4a15a486ffe00a6105d78c 254 Gene3D G3DSA:2.10.10.20 210 253 7.0E-20 T 14-10-2018 AMIS_52570 b1f210c69e4a15a486ffe00a6105d78c 254 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 29 167 3.8E-17 T 14-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal AMIS_52570 b1f210c69e4a15a486ffe00a6105d78c 254 SUPERFAMILY SSF51055 211 253 2.75E-14 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AMIS_52800 2e5eef83d0a726ccc35614caa496f882 341 SUPERFAMILY SSF50331 238 334 6.62E-13 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal AMIS_52800 2e5eef83d0a726ccc35614caa496f882 341 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_52800 2e5eef83d0a726ccc35614caa496f882 341 Pfam PF08402 TOBE domain 271 335 1.6E-7 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 AMIS_52800 2e5eef83d0a726ccc35614caa496f882 341 SUPERFAMILY SSF52540 6 241 2.35E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_52800 2e5eef83d0a726ccc35614caa496f882 341 Pfam PF00005 ABC transporter 21 161 2.1E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_52800 2e5eef83d0a726ccc35614caa496f882 341 Gene3D G3DSA:3.40.50.300 6 248 2.6E-74 T 14-10-2018 AMIS_52800 2e5eef83d0a726ccc35614caa496f882 341 SMART SM00382 30 211 1.7E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_51680 8278a359a0a9b34a1bc8c1f1bf7fe05d 190 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 63 1.7E-16 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_51680 8278a359a0a9b34a1bc8c1f1bf7fe05d 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 1.1E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_51680 8278a359a0a9b34a1bc8c1f1bf7fe05d 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 1.1E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_51680 8278a359a0a9b34a1bc8c1f1bf7fe05d 190 SUPERFAMILY SSF46689 3 86 2.82E-20 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_51680 8278a359a0a9b34a1bc8c1f1bf7fe05d 190 SUPERFAMILY SSF48498 93 188 5.78E-5 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_51680 8278a359a0a9b34a1bc8c1f1bf7fe05d 190 Gene3D G3DSA:1.10.357.10 8 190 2.7E-39 T 14-10-2018 AMIS_51680 8278a359a0a9b34a1bc8c1f1bf7fe05d 190 ProSitePatterns PS01081 TetR-type HTH domain signature. 29 59 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMIS_51190 5a64a2d64fa5a027810bbf566a11282e 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 200 1.1E-52 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 AMIS_51190 5a64a2d64fa5a027810bbf566a11282e 206 Pfam PF01300 Telomere recombination 23 198 4.0E-43 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 AMIS_51190 5a64a2d64fa5a027810bbf566a11282e 206 Gene3D G3DSA:3.90.870.10 1 205 2.7E-60 T 14-10-2018 AMIS_51190 5a64a2d64fa5a027810bbf566a11282e 206 SUPERFAMILY SSF55821 2 204 6.1E-61 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AMIS_15800 0e56903137c817a27222d29dee902fa7 260 SUPERFAMILY SSF52540 24 255 5.76E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_15800 0e56903137c817a27222d29dee902fa7 260 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_15800 0e56903137c817a27222d29dee902fa7 260 SMART SM00382 50 249 1.3E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_15800 0e56903137c817a27222d29dee902fa7 260 Gene3D G3DSA:3.40.50.300 20 257 3.6E-62 T 14-10-2018 AMIS_15800 0e56903137c817a27222d29dee902fa7 260 Pfam PF00005 ABC transporter 41 185 5.2E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_42760 7166adee8f776756fc9a9d301be0b130 125 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 11 115 4.9E-6 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMIS_42760 7166adee8f776756fc9a9d301be0b130 125 Gene3D G3DSA:3.10.180.10 2 118 5.4E-28 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_42760 7166adee8f776756fc9a9d301be0b130 125 SUPERFAMILY SSF54593 10 119 2.15E-23 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_37050 580853251fdb5b7ab5058b6bd2a1a428 225 Gene3D G3DSA:3.40.50.880 2 225 6.2E-78 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_37050 580853251fdb5b7ab5058b6bd2a1a428 225 SUPERFAMILY SSF52317 5 223 3.57E-69 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_37050 580853251fdb5b7ab5058b6bd2a1a428 225 Pfam PF01965 DJ-1/PfpI family 28 220 1.5E-18 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 AMIS_4130 eef86d875c1da03dbc99f6eaa48f2e8e 482 Pfam PF07690 Major Facilitator Superfamily 19 411 5.3E-50 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_4130 eef86d875c1da03dbc99f6eaa48f2e8e 482 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 15 413 7.8E-81 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 AMIS_4130 eef86d875c1da03dbc99f6eaa48f2e8e 482 Gene3D G3DSA:1.20.1720.10 14 222 9.8E-54 T 14-10-2018 AMIS_4130 eef86d875c1da03dbc99f6eaa48f2e8e 482 Gene3D G3DSA:1.20.1250.20 257 462 1.3E-13 T 14-10-2018 AMIS_4130 eef86d875c1da03dbc99f6eaa48f2e8e 482 SUPERFAMILY SSF103473 6 463 3.27E-64 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_74970 5212b368246708a900dd2fb059d4e066 303 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 12 303 4.0E-133 T 14-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AMIS_74970 5212b368246708a900dd2fb059d4e066 303 Gene3D G3DSA:3.40.50.620 10 213 3.3E-55 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMIS_74970 5212b368246708a900dd2fb059d4e066 303 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 33 256 1.3E-44 T 14-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 AMIS_74970 5212b368246708a900dd2fb059d4e066 303 SUPERFAMILY SSF52402 9 211 1.46E-63 T 14-10-2018 AMIS_74970 5212b368246708a900dd2fb059d4e066 303 PIRSF PIRSF002936 3 303 9.2E-136 T 14-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AMIS_30880 c64cd1915e688a8302c9349c7b0d9512 383 Gene3D G3DSA:3.40.50.1110 169 382 4.9E-33 T 14-10-2018 IPR036514 SGNH hydrolase superfamily AMIS_30880 c64cd1915e688a8302c9349c7b0d9512 383 SUPERFAMILY SSF52266 175 380 5.04E-40 T 14-10-2018 AMIS_30880 c64cd1915e688a8302c9349c7b0d9512 383 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 180 370 3.9E-23 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain AMIS_60980 f2dd0bccaa1ae9bc0361aac84210266e 271 Gene3D G3DSA:3.40.50.150 57 265 3.0E-78 T 14-10-2018 AMIS_60980 f2dd0bccaa1ae9bc0361aac84210266e 271 PIRSF PIRSF005578 1 264 5.9E-92 T 14-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 AMIS_60980 f2dd0bccaa1ae9bc0361aac84210266e 271 SUPERFAMILY SSF55174 5 63 2.06E-10 T 14-10-2018 AMIS_60980 f2dd0bccaa1ae9bc0361aac84210266e 271 SMART SM00363 5 72 1.4E-4 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_60980 f2dd0bccaa1ae9bc0361aac84210266e 271 Pfam PF01728 FtsJ-like methyltransferase 63 245 7.1E-18 T 14-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 AMIS_60980 f2dd0bccaa1ae9bc0361aac84210266e 271 TIGRFAM TIGR00478 tly: TlyA family rRNA methyltransferase/putative hemolysin 6 240 8.3E-61 T 14-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 AMIS_60980 f2dd0bccaa1ae9bc0361aac84210266e 271 SUPERFAMILY SSF53335 63 247 3.32E-21 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_60980 f2dd0bccaa1ae9bc0361aac84210266e 271 Gene3D G3DSA:3.10.290.10 3 56 1.0E-7 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AMIS_60980 f2dd0bccaa1ae9bc0361aac84210266e 271 Pfam PF01479 S4 domain 6 50 6.9E-7 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_4530 968a403de6a9dc9eef0f8073be4d470c 128 Gene3D G3DSA:3.30.1330.40 1 126 2.6E-33 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AMIS_4530 968a403de6a9dc9eef0f8073be4d470c 128 SUPERFAMILY SSF55298 4 126 2.04E-36 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AMIS_4530 968a403de6a9dc9eef0f8073be4d470c 128 Pfam PF01042 Endoribonuclease L-PSP 17 124 5.6E-25 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 AMIS_16210 857b63f0fb439b81917b0b13fddd4bd3 314 Pfam PF01040 UbiA prenyltransferase family 46 294 9.1E-63 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 AMIS_16210 857b63f0fb439b81917b0b13fddd4bd3 314 Gene3D G3DSA:1.10.357.140 42 197 1.1E-19 T 14-10-2018 AMIS_16210 857b63f0fb439b81917b0b13fddd4bd3 314 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 30 313 19.416 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 AMIS_16210 857b63f0fb439b81917b0b13fddd4bd3 314 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 34 311 7.6E-92 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 AMIS_65940 19ce3c27584389e0f868a165b18755c8 826 Pfam PF00916 Sulfate permease family 8 360 2.5E-71 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 AMIS_65940 19ce3c27584389e0f868a165b18755c8 826 SUPERFAMILY SSF53056 518 758 4.58E-46 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 AMIS_65940 19ce3c27584389e0f868a165b18755c8 826 Pfam PF00484 Carbonic anhydrase 555 748 3.1E-38 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMIS_65940 19ce3c27584389e0f868a165b18755c8 826 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 559 566 - T 14-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMIS_65940 19ce3c27584389e0f868a165b18755c8 826 Gene3D G3DSA:3.40.1050.10 513 603 5.8E-23 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 AMIS_65940 19ce3c27584389e0f868a165b18755c8 826 Gene3D G3DSA:3.40.1050.10 633 759 5.2E-28 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 AMIS_65940 19ce3c27584389e0f868a165b18755c8 826 SMART SM00947 547 753 3.6E-57 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMIS_55200 81935c0aa5ce68bc59cfe6e38cdb5c0a 371 PIRSF PIRSF000183 1 371 8.8E-166 T 14-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 AMIS_55200 81935c0aa5ce68bc59cfe6e38cdb5c0a 371 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 366 1.7E-172 T 14-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 AMIS_55200 81935c0aa5ce68bc59cfe6e38cdb5c0a 371 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 3.8E-46 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AMIS_55200 81935c0aa5ce68bc59cfe6e38cdb5c0a 371 Gene3D G3DSA:3.40.50.720 130 305 2.3E-138 T 14-10-2018 AMIS_55200 81935c0aa5ce68bc59cfe6e38cdb5c0a 371 SUPERFAMILY SSF52283 1 359 6.63E-67 T 14-10-2018 AMIS_55200 81935c0aa5ce68bc59cfe6e38cdb5c0a 371 Gene3D G3DSA:3.40.50.720 3 353 2.3E-138 T 14-10-2018 AMIS_55200 81935c0aa5ce68bc59cfe6e38cdb5c0a 371 SMART SM01003 4 137 7.4E-78 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AMIS_55200 81935c0aa5ce68bc59cfe6e38cdb5c0a 371 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 143 352 1.1E-81 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AMIS_55200 81935c0aa5ce68bc59cfe6e38cdb5c0a 371 SUPERFAMILY SSF51735 137 303 5.33E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_55200 81935c0aa5ce68bc59cfe6e38cdb5c0a 371 SMART SM01002 149 297 1.2E-84 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AMIS_17010 144bd47cf51defa7a4a3d446939cc9e3 273 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 251 7.7E-34 T 14-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase AMIS_50240 c0050e21b0e19b5057f3184791982e38 216 Gene3D G3DSA:1.10.287.700 34 129 5.9E-6 T 14-10-2018 AMIS_50240 c0050e21b0e19b5057f3184791982e38 216 Pfam PF12277 Protein of unknown function (DUF3618) 3 47 3.1E-14 T 14-10-2018 IPR022062 Protein of unknown function DUF3618 AMIS_3840 c84486551eda2b1def78151d3e8c130a 488 SUPERFAMILY SSF103473 11 404 5.36E-44 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_3840 c84486551eda2b1def78151d3e8c130a 488 Gene3D G3DSA:1.20.1250.20 7 394 9.3E-40 T 14-10-2018 AMIS_3840 c84486551eda2b1def78151d3e8c130a 488 Pfam PF05977 Transmembrane secretion effector 3 399 1.6E-45 T 14-10-2018 IPR010290 Transmembrane secretion effector AMIS_27750 f4e675758580922dbd7f7b2a10507e55 132 Gene3D G3DSA:3.10.450.50 1 132 6.9E-32 T 14-10-2018 AMIS_27750 f4e675758580922dbd7f7b2a10507e55 132 Pfam PF12680 SnoaL-like domain 6 106 1.0E-13 T 14-10-2018 IPR037401 SnoaL-like domain AMIS_27750 f4e675758580922dbd7f7b2a10507e55 132 SUPERFAMILY SSF54427 6 124 5.99E-20 T 14-10-2018 IPR032710 NTF2-like domain superfamily AMIS_62480 8ffd8539e585b87b058811ee790e26f7 279 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 269 1.5E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_62480 8ffd8539e585b87b058811ee790e26f7 279 Gene3D G3DSA:1.10.3720.10 4 267 3.4E-62 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_62480 8ffd8539e585b87b058811ee790e26f7 279 SUPERFAMILY SSF161098 4 273 2.15E-67 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_79310 96c76b7cf5eab2293c3fd6c30ba9b21e 401 SUPERFAMILY SSF103473 25 397 7.19E-57 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_79310 96c76b7cf5eab2293c3fd6c30ba9b21e 401 PRINTS PR01035 Tetracycline resistance protein signature 61 80 7.6E-6 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMIS_79310 96c76b7cf5eab2293c3fd6c30ba9b21e 401 PRINTS PR01035 Tetracycline resistance protein signature 347 370 7.6E-6 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMIS_79310 96c76b7cf5eab2293c3fd6c30ba9b21e 401 PRINTS PR01035 Tetracycline resistance protein signature 178 198 7.6E-6 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMIS_79310 96c76b7cf5eab2293c3fd6c30ba9b21e 401 PRINTS PR01035 Tetracycline resistance protein signature 32 48 7.6E-6 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMIS_79310 96c76b7cf5eab2293c3fd6c30ba9b21e 401 PRINTS PR01035 Tetracycline resistance protein signature 120 141 7.6E-6 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMIS_79310 96c76b7cf5eab2293c3fd6c30ba9b21e 401 PRINTS PR01035 Tetracycline resistance protein signature 150 172 7.6E-6 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMIS_79310 96c76b7cf5eab2293c3fd6c30ba9b21e 401 ProSitePatterns PS00216 Sugar transport proteins signature 1. 79 95 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AMIS_79310 96c76b7cf5eab2293c3fd6c30ba9b21e 401 Pfam PF07690 Major Facilitator Superfamily 27 299 6.7E-35 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_79310 96c76b7cf5eab2293c3fd6c30ba9b21e 401 Gene3D G3DSA:1.20.1250.20 21 399 1.2E-54 T 14-10-2018 AMIS_25820 cc7e73d12686d4f11fe39203ac0bafe2 458 Pfam PF01565 FAD binding domain 41 175 2.0E-22 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AMIS_25820 cc7e73d12686d4f11fe39203ac0bafe2 458 ProSitePatterns PS00862 Oxygen oxidoreductases covalent FAD-binding site. 41 74 - T 14-10-2018 IPR006093 Oxygen oxidoreductase covalent FAD-binding site GO:0016491|GO:0055114 AMIS_25820 cc7e73d12686d4f11fe39203ac0bafe2 458 Pfam PF08031 Berberine and berberine like 428 458 2.1E-5 T 14-10-2018 IPR012951 Berberine/berberine-like GO:0016491|GO:0050660|GO:0055114 AMIS_25820 cc7e73d12686d4f11fe39203ac0bafe2 458 Gene3D G3DSA:3.40.462.20 206 415 5.1E-89 T 14-10-2018 AMIS_25820 cc7e73d12686d4f11fe39203ac0bafe2 458 SUPERFAMILY SSF56176 3 206 1.07E-41 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AMIS_25820 cc7e73d12686d4f11fe39203ac0bafe2 458 Gene3D G3DSA:3.30.43.10 16 92 1.0E-14 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 AMIS_25820 cc7e73d12686d4f11fe39203ac0bafe2 458 Gene3D G3DSA:3.30.465.10 105 446 5.1E-89 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AMIS_77260 d422a2995a648b0685bab59e27623a6f 437 Pfam PF13360 PQQ-like domain 76 191 2.7E-10 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat AMIS_77260 d422a2995a648b0685bab59e27623a6f 437 SUPERFAMILY SSF50998 53 278 5.49E-12 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AMIS_77260 d422a2995a648b0685bab59e27623a6f 437 Gene3D G3DSA:2.130.10.10 9 193 5.3E-13 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_77260 d422a2995a648b0685bab59e27623a6f 437 Gene3D G3DSA:2.130.10.10 194 383 5.2E-8 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_62550 550840b5ae0735564256995c72513401 744 Pfam PF01757 Acyltransferase family 31 373 6.6E-23 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 AMIS_23970 01916c6b91ba062099b0fdde104e4fb3 456 Gene3D G3DSA:3.40.605.10 3 444 4.7E-158 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AMIS_23970 01916c6b91ba062099b0fdde104e4fb3 456 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 259 270 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AMIS_23970 01916c6b91ba062099b0fdde104e4fb3 456 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 231 238 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AMIS_23970 01916c6b91ba062099b0fdde104e4fb3 456 SUPERFAMILY SSF53720 3 452 3.93E-145 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMIS_23970 01916c6b91ba062099b0fdde104e4fb3 456 Pfam PF00171 Aldehyde dehydrogenase family 3 448 2.1E-147 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AMIS_23970 01916c6b91ba062099b0fdde104e4fb3 456 Gene3D G3DSA:3.40.309.10 237 421 4.7E-158 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AMIS_74610 c36c00b8c44c1a63fcfab62a5b20088a 418 SUPERFAMILY SSF55031 207 325 2.54E-20 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AMIS_74610 c36c00b8c44c1a63fcfab62a5b20088a 418 SUPERFAMILY SSF53187 31 414 1.16E-71 T 14-10-2018 AMIS_74610 c36c00b8c44c1a63fcfab62a5b20088a 418 Gene3D G3DSA:3.40.630.10 40 398 2.0E-109 T 14-10-2018 AMIS_74610 c36c00b8c44c1a63fcfab62a5b20088a 418 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 40 399 2.1E-105 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 AMIS_74610 c36c00b8c44c1a63fcfab62a5b20088a 418 Gene3D G3DSA:3.30.70.360 207 321 2.0E-109 T 14-10-2018 AMIS_74610 c36c00b8c44c1a63fcfab62a5b20088a 418 Pfam PF07687 Peptidase dimerisation domain 212 304 7.0E-5 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain AMIS_74610 c36c00b8c44c1a63fcfab62a5b20088a 418 Pfam PF01546 Peptidase family M20/M25/M40 96 409 9.5E-29 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 AMIS_74610 c36c00b8c44c1a63fcfab62a5b20088a 418 PIRSF PIRSF005962 30 416 5.9E-105 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 AMIS_47650 2777198fcb0ffbfd60fbe795af7bb5f4 237 SUPERFAMILY SSF53335 6 162 2.81E-35 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_47650 2777198fcb0ffbfd60fbe795af7bb5f4 237 Gene3D G3DSA:3.40.50.150 8 216 2.2E-37 T 14-10-2018 AMIS_47650 2777198fcb0ffbfd60fbe795af7bb5f4 237 Pfam PF08241 Methyltransferase domain 39 127 2.5E-20 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 AMIS_4650 2686087a88c5a75d770d9303d675231d 478 Pfam PF00464 Serine hydroxymethyltransferase 160 432 6.2E-97 T 14-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AMIS_4650 2686087a88c5a75d770d9303d675231d 478 Pfam PF00464 Serine hydroxymethyltransferase 25 126 3.1E-28 T 14-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AMIS_4650 2686087a88c5a75d770d9303d675231d 478 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 22 474 45.539 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AMIS_4650 2686087a88c5a75d770d9303d675231d 478 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 271 287 - T 14-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AMIS_4650 2686087a88c5a75d770d9303d675231d 478 PIRSF PIRSF000412 5 477 1.0E-161 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AMIS_4650 2686087a88c5a75d770d9303d675231d 478 Gene3D G3DSA:3.90.1150.10 332 477 4.0E-48 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMIS_4650 2686087a88c5a75d770d9303d675231d 478 SUPERFAMILY SSF53383 21 474 3.42E-146 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_60330 96700c33fa2abb99b57a59d07f073bc0 426 Pfam PF08281 Sigma-70, region 4 123 174 7.4E-8 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_60330 96700c33fa2abb99b57a59d07f073bc0 426 Gene3D G3DSA:1.10.10.10 128 178 2.4E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_60330 96700c33fa2abb99b57a59d07f073bc0 426 SUPERFAMILY SSF88659 116 176 6.02E-9 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_60330 96700c33fa2abb99b57a59d07f073bc0 426 SUPERFAMILY SSF88946 22 105 1.18E-12 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_60330 96700c33fa2abb99b57a59d07f073bc0 426 Pfam PF04542 Sigma-70 region 2 34 89 2.2E-8 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_60330 96700c33fa2abb99b57a59d07f073bc0 426 Gene3D G3DSA:1.10.1740.10 12 90 2.2E-7 T 14-10-2018 AMIS_60330 96700c33fa2abb99b57a59d07f073bc0 426 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 33 176 7.0E-12 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_4870 25f583347d52a95186f8da431fd98240 675 Gene3D G3DSA:2.130.10.10 100 357 2.1E-5 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_4870 25f583347d52a95186f8da431fd98240 675 SUPERFAMILY SSF75011 59 358 2.75E-15 T 14-10-2018 AMIS_67400 792212872dc698ca18905689b89d8b35 409 PIRSF PIRSF036428 3 401 9.9E-140 T 14-10-2018 IPR006365 Cobalamin (vitamin B12) biosynthesis CobL/Precorrin-6Y C(5,15)-methyltransferase GO:0008276|GO:0009236 KEGG: 00860+2.1.1.132 AMIS_67400 792212872dc698ca18905689b89d8b35 409 Gene3D G3DSA:3.40.1010.10 5 108 1.8E-20 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 AMIS_67400 792212872dc698ca18905689b89d8b35 409 TIGRFAM TIGR02467 CbiE: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 9 193 2.0E-46 T 14-10-2018 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase GO:0008276|GO:0009236 AMIS_67400 792212872dc698ca18905689b89d8b35 409 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 7 190 2.8E-25 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 AMIS_67400 792212872dc698ca18905689b89d8b35 409 SUPERFAMILY SSF53790 7 208 4.97E-39 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 AMIS_67400 792212872dc698ca18905689b89d8b35 409 TIGRFAM TIGR02469 CbiT: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 232 353 5.2E-33 T 14-10-2018 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit GO:0008276|GO:0009236 KEGG: 00860+2.1.1.196|MetaCyc: PWY-7377 AMIS_67400 792212872dc698ca18905689b89d8b35 409 SUPERFAMILY SSF53335 221 390 4.06E-29 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_67400 792212872dc698ca18905689b89d8b35 409 Gene3D G3DSA:3.40.50.150 226 401 3.9E-68 T 14-10-2018 AMIS_53930 11d5cc0c8ca302a1b4a25cb2fa879585 200 TIGRFAM TIGR03847 TIGR03847: conserved hypothetical protein 5 196 9.4E-67 T 14-10-2018 IPR021441 Protein of unknown function DUF3090 AMIS_53930 11d5cc0c8ca302a1b4a25cb2fa879585 200 Pfam PF11290 Protein of unknown function (DUF3090) 6 192 3.7E-68 T 14-10-2018 IPR021441 Protein of unknown function DUF3090 AMIS_32580 e1fccbdf713e9ad0b5655e91821cadf3 196 SUPERFAMILY SSF48498 83 193 1.48E-14 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_32580 e1fccbdf713e9ad0b5655e91821cadf3 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 60 1.8E-14 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_32580 e1fccbdf713e9ad0b5655e91821cadf3 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 7.0E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_32580 e1fccbdf713e9ad0b5655e91821cadf3 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 7.0E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_32580 e1fccbdf713e9ad0b5655e91821cadf3 196 Gene3D G3DSA:1.10.357.10 13 196 1.6E-51 T 14-10-2018 AMIS_32580 e1fccbdf713e9ad0b5655e91821cadf3 196 SUPERFAMILY SSF46689 15 82 9.48E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_32580 e1fccbdf713e9ad0b5655e91821cadf3 196 ProSitePatterns PS01081 TetR-type HTH domain signature. 27 58 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMIS_12290 ea7d834f5ab172554eccb2dd2c5f8ba7 368 PIRSF PIRSF035875 54 354 7.7E-88 T 14-10-2018 IPR017039 Virulence factor BrkB AMIS_12290 ea7d834f5ab172554eccb2dd2c5f8ba7 368 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 70 331 9.6E-35 T 14-10-2018 IPR017039 Virulence factor BrkB AMIS_12290 ea7d834f5ab172554eccb2dd2c5f8ba7 368 Pfam PF03631 Virulence factor BrkB 78 333 7.1E-68 T 14-10-2018 IPR017039 Virulence factor BrkB AMIS_17460 3b0b010ae31c47e5f17df96fbedd4fbd 703 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 25 697 1.0E-303 T 14-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 AMIS_17460 3b0b010ae31c47e5f17df96fbedd4fbd 703 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 318 332 3.1E-25 T 14-10-2018 AMIS_17460 3b0b010ae31c47e5f17df96fbedd4fbd 703 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 484 494 3.1E-25 T 14-10-2018 AMIS_17460 3b0b010ae31c47e5f17df96fbedd4fbd 703 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 537 556 3.1E-25 T 14-10-2018 AMIS_17460 3b0b010ae31c47e5f17df96fbedd4fbd 703 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 560 572 3.1E-25 T 14-10-2018 AMIS_17460 3b0b010ae31c47e5f17df96fbedd4fbd 703 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 153 167 3.1E-25 T 14-10-2018 AMIS_17460 3b0b010ae31c47e5f17df96fbedd4fbd 703 Pfam PF00122 E1-E2 ATPase 115 296 2.0E-31 T 14-10-2018 AMIS_17460 3b0b010ae31c47e5f17df96fbedd4fbd 703 Gene3D G3DSA:1.20.1110.10 582 628 7.0E-24 T 14-10-2018 AMIS_17460 3b0b010ae31c47e5f17df96fbedd4fbd 703 SUPERFAMILY SSF56784 316 586 5.52E-37 T 14-10-2018 IPR036412 HAD-like superfamily AMIS_17460 3b0b010ae31c47e5f17df96fbedd4fbd 703 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 21 701 40.335 T 14-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 AMIS_17460 3b0b010ae31c47e5f17df96fbedd4fbd 703 Gene3D G3DSA:3.40.1110.10 329 472 7.6E-49 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AMIS_17460 3b0b010ae31c47e5f17df96fbedd4fbd 703 SUPERFAMILY SSF81665 44 312 1.44E-10 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 AMIS_17460 3b0b010ae31c47e5f17df96fbedd4fbd 703 Gene3D G3DSA:2.70.150.20 103 211 1.3E-25 T 14-10-2018 AMIS_17460 3b0b010ae31c47e5f17df96fbedd4fbd 703 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 320 326 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AMIS_17460 3b0b010ae31c47e5f17df96fbedd4fbd 703 SUPERFAMILY SSF81653 118 206 4.05E-20 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 AMIS_17460 3b0b010ae31c47e5f17df96fbedd4fbd 703 Gene3D G3DSA:3.40.50.1000 513 581 7.0E-24 T 14-10-2018 IPR023214 HAD superfamily AMIS_17460 3b0b010ae31c47e5f17df96fbedd4fbd 703 Pfam PF00702 haloacid dehalogenase-like hydrolase 315 551 7.4E-30 T 14-10-2018 AMIS_17460 3b0b010ae31c47e5f17df96fbedd4fbd 703 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 418 622 1.9E-43 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AMIS_17460 3b0b010ae31c47e5f17df96fbedd4fbd 703 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 78 351 1.4E-28 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AMIS_19470 7af32caf3d4d915e8063563c04a87325 437 Gene3D G3DSA:1.10.150.130 76 194 1.2E-18 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal AMIS_19470 7af32caf3d4d915e8063563c04a87325 437 Pfam PF00589 Phage integrase family 205 330 3.3E-8 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMIS_19470 7af32caf3d4d915e8063563c04a87325 437 Pfam PF00589 Phage integrase family 366 410 3.3E-11 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMIS_19470 7af32caf3d4d915e8063563c04a87325 437 SUPERFAMILY SSF56349 76 418 1.11E-46 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMIS_19470 7af32caf3d4d915e8063563c04a87325 437 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 77 133 5.4E-8 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AMIS_50230 6deb0670270df5d4b6f36f89d716202d 315 TIGRFAM TIGR03557 F420_G6P_family: F420-dependent oxidoreductase, G6PDH family 3 315 1.4E-137 T 14-10-2018 IPR019945 F420-dependent glucose-6-phosphate dehydrogenase-related AMIS_50230 6deb0670270df5d4b6f36f89d716202d 315 Pfam PF00296 Luciferase-like monooxygenase 6 290 5.0E-52 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMIS_50230 6deb0670270df5d4b6f36f89d716202d 315 SUPERFAMILY SSF51679 1 308 4.71E-64 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_50230 6deb0670270df5d4b6f36f89d716202d 315 Gene3D G3DSA:3.20.20.30 1 315 3.6E-66 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_12820 ba4b6a979719d6e2cec64cbbd53ae012 597 Gene3D G3DSA:3.40.50.300 348 554 3.7E-25 T 14-10-2018 AMIS_12820 ba4b6a979719d6e2cec64cbbd53ae012 597 Pfam PF12696 TraM recognition site of TraD and TraG 410 523 2.4E-26 T 14-10-2018 IPR032689 TraD/TraG, TraM recognition site AMIS_12820 ba4b6a979719d6e2cec64cbbd53ae012 597 SUPERFAMILY SSF52540 123 554 3.88E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_35620 dd3088549fa6f3a213dc00d707d75836 451 Gene3D G3DSA:3.50.50.60 2 451 3.9E-176 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_35620 dd3088549fa6f3a213dc00d707d75836 451 SUPERFAMILY SSF51905 7 450 1.47E-67 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_35620 dd3088549fa6f3a213dc00d707d75836 451 PRINTS PR00757 Flavin-containing amine oxidase signature 176 197 2.6E-17 T 14-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 AMIS_35620 dd3088549fa6f3a213dc00d707d75836 451 PRINTS PR00757 Flavin-containing amine oxidase signature 430 447 2.6E-17 T 14-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 AMIS_35620 dd3088549fa6f3a213dc00d707d75836 451 PRINTS PR00757 Flavin-containing amine oxidase signature 295 314 2.6E-17 T 14-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 AMIS_35620 dd3088549fa6f3a213dc00d707d75836 451 PRINTS PR00757 Flavin-containing amine oxidase signature 378 397 2.6E-17 T 14-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 AMIS_35620 dd3088549fa6f3a213dc00d707d75836 451 PRINTS PR00757 Flavin-containing amine oxidase signature 399 421 2.6E-17 T 14-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 AMIS_35620 dd3088549fa6f3a213dc00d707d75836 451 PRINTS PR00757 Flavin-containing amine oxidase signature 8 27 2.6E-17 T 14-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 AMIS_35620 dd3088549fa6f3a213dc00d707d75836 451 SUPERFAMILY SSF54373 292 398 1.37E-30 T 14-10-2018 AMIS_35620 dd3088549fa6f3a213dc00d707d75836 451 Pfam PF01593 Flavin containing amine oxidoreductase 17 449 4.3E-74 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 AMIS_50780 eee4d4aefcc7317f60f4ab2b21ed1614 272 SUPERFAMILY SSF53613 1 268 8.26E-42 T 14-10-2018 IPR029056 Ribokinase-like AMIS_50780 eee4d4aefcc7317f60f4ab2b21ed1614 272 Gene3D G3DSA:3.40.1190.20 1 272 1.8E-49 T 14-10-2018 IPR029056 Ribokinase-like AMIS_50780 eee4d4aefcc7317f60f4ab2b21ed1614 272 PRINTS PR00990 Ribokinase signature 32 51 1.9E-5 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AMIS_50780 eee4d4aefcc7317f60f4ab2b21ed1614 272 PRINTS PR00990 Ribokinase signature 193 204 1.9E-5 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AMIS_50780 eee4d4aefcc7317f60f4ab2b21ed1614 272 PRINTS PR00990 Ribokinase signature 5 26 1.9E-5 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AMIS_50780 eee4d4aefcc7317f60f4ab2b21ed1614 272 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 223 236 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AMIS_50780 eee4d4aefcc7317f60f4ab2b21ed1614 272 Pfam PF00294 pfkB family carbohydrate kinase 3 267 5.1E-30 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB AMIS_35380 2ae791ff28f50faee7dd351adf6cb58f 249 Gene3D G3DSA:3.30.750.24 5 112 1.7E-6 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_35380 2ae791ff28f50faee7dd351adf6cb58f 249 SUPERFAMILY SSF55874 153 244 1.96E-9 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_35380 2ae791ff28f50faee7dd351adf6cb58f 249 Gene3D G3DSA:3.30.565.10 113 247 8.4E-21 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_35380 2ae791ff28f50faee7dd351adf6cb58f 249 SUPERFAMILY SSF52091 9 98 6.28E-5 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_60390 652fa313fcfa52a8535f24c3e848b1ac 219 Pfam PF00925 GTP cyclohydrolase II 22 189 1.3E-59 T 14-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AMIS_60390 652fa313fcfa52a8535f24c3e848b1ac 219 SUPERFAMILY SSF142695 20 190 5.89E-53 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AMIS_60390 652fa313fcfa52a8535f24c3e848b1ac 219 Gene3D G3DSA:3.40.50.10990 12 192 1.7E-61 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AMIS_60390 652fa313fcfa52a8535f24c3e848b1ac 219 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 12 215 35.389 T 14-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AMIS_74690 22c8eb6d09ac66a3c63ce22eb9088b23 309 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 52 271 6.6E-55 T 14-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AMIS_74690 22c8eb6d09ac66a3c63ce22eb9088b23 309 PIRSF PIRSF001357 44 299 2.0E-81 T 14-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AMIS_74690 22c8eb6d09ac66a3c63ce22eb9088b23 309 SUPERFAMILY SSF51569 51 289 4.19E-77 T 14-10-2018 AMIS_74690 22c8eb6d09ac66a3c63ce22eb9088b23 309 Pfam PF01791 DeoC/LacD family aldolase 45 287 4.2E-27 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AMIS_74690 22c8eb6d09ac66a3c63ce22eb9088b23 309 Gene3D G3DSA:3.20.20.70 39 294 4.1E-92 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_74690 22c8eb6d09ac66a3c63ce22eb9088b23 309 SMART SM01133 50 290 3.2E-78 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AMIS_23950 081dd1b88aef8ad6b5f4c363daa1187f 253 Gene3D G3DSA:1.10.3630.10 94 248 3.1E-5 T 14-10-2018 IPR038261 Golgi phosphoprotein 3-like domain superfamily AMIS_23950 081dd1b88aef8ad6b5f4c363daa1187f 253 Pfam PF05719 Golgi phosphoprotein 3 (GPP34) 10 232 2.3E-25 T 14-10-2018 IPR008628 Golgi phosphoprotein 3-like GO:0070273 AMIS_77560 5bc549dff173c4a14973d7713e16e230 352 PIRSF PIRSF000451 1 349 1.7E-95 T 14-10-2018 IPR011141 Polyketide synthase, type III GO:0009058|GO:0016747 AMIS_77560 5bc549dff173c4a14973d7713e16e230 352 Gene3D G3DSA:3.40.47.10 209 347 5.1E-43 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_77560 5bc549dff173c4a14973d7713e16e230 352 Pfam PF02797 Chalcone and stilbene synthases, C-terminal domain 220 346 8.0E-23 T 14-10-2018 IPR012328 Chalcone/stilbene synthase, C-terminal AMIS_77560 5bc549dff173c4a14973d7713e16e230 352 Gene3D G3DSA:3.40.47.10 1 204 6.0E-52 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_77560 5bc549dff173c4a14973d7713e16e230 352 SUPERFAMILY SSF53901 4 344 2.18E-48 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_77560 5bc549dff173c4a14973d7713e16e230 352 Pfam PF00195 Chalcone and stilbene synthases, N-terminal domain 4 201 4.9E-19 T 14-10-2018 IPR001099 Chalcone/stilbene synthase, N-terminal AMIS_26300 5b97fcdbeede2097219f7349083e0cd7 346 Gene3D G3DSA:1.10.260.40 2 65 8.6E-20 T 14-10-2018 AMIS_26300 5b97fcdbeede2097219f7349083e0cd7 346 Pfam PF13377 Periplasmic binding protein-like domain 173 339 3.0E-36 T 14-10-2018 AMIS_26300 5b97fcdbeede2097219f7349083e0cd7 346 Pfam PF00356 Bacterial regulatory proteins, lacI family 10 55 5.4E-14 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_26300 5b97fcdbeede2097219f7349083e0cd7 346 SUPERFAMILY SSF53822 67 341 2.94E-65 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_26300 5b97fcdbeede2097219f7349083e0cd7 346 SUPERFAMILY SSF47413 7 64 1.62E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_26300 5b97fcdbeede2097219f7349083e0cd7 346 Gene3D G3DSA:3.40.50.2300 165 336 4.5E-69 T 14-10-2018 AMIS_26300 5b97fcdbeede2097219f7349083e0cd7 346 Gene3D G3DSA:3.40.50.2300 68 331 4.5E-69 T 14-10-2018 AMIS_26300 5b97fcdbeede2097219f7349083e0cd7 346 SMART SM00354 8 77 5.8E-24 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_23740 90c4a31d39d9bdf6b05a067e88f4eacf 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 4.7E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_23740 90c4a31d39d9bdf6b05a067e88f4eacf 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 4.7E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_23740 90c4a31d39d9bdf6b05a067e88f4eacf 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 4.7E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_23740 90c4a31d39d9bdf6b05a067e88f4eacf 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 4.7E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_23740 90c4a31d39d9bdf6b05a067e88f4eacf 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 4.7E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_23740 90c4a31d39d9bdf6b05a067e88f4eacf 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 4.7E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_23740 90c4a31d39d9bdf6b05a067e88f4eacf 251 SUPERFAMILY SSF51735 5 250 1.05E-68 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_23740 90c4a31d39d9bdf6b05a067e88f4eacf 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 249 1.5E-46 T 14-10-2018 AMIS_23740 90c4a31d39d9bdf6b05a067e88f4eacf 251 Gene3D G3DSA:3.40.50.720 3 251 1.4E-71 T 14-10-2018 AMIS_23740 90c4a31d39d9bdf6b05a067e88f4eacf 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMIS_23740 90c4a31d39d9bdf6b05a067e88f4eacf 251 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 10 251 1.7E-94 T 14-10-2018 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 AMIS_23740 90c4a31d39d9bdf6b05a067e88f4eacf 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 4.5E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_23740 90c4a31d39d9bdf6b05a067e88f4eacf 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 4.5E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_23740 90c4a31d39d9bdf6b05a067e88f4eacf 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 4.5E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_34460 6818ed936b279463a12a2677195eb6a4 217 SMART SM00345 17 73 1.3E-12 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_34460 6818ed936b279463a12a2677195eb6a4 217 SUPERFAMILY SSF46785 9 77 1.85E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_34460 6818ed936b279463a12a2677195eb6a4 217 SMART SM00895 83 205 7.6E-17 T 14-10-2018 IPR011711 GntR, C-terminal AMIS_34460 6818ed936b279463a12a2677195eb6a4 217 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 70 2.4E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_34460 6818ed936b279463a12a2677195eb6a4 217 SUPERFAMILY SSF48008 80 210 2.3E-19 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AMIS_34460 6818ed936b279463a12a2677195eb6a4 217 Pfam PF07729 FCD domain 83 204 1.9E-18 T 14-10-2018 IPR011711 GntR, C-terminal AMIS_34460 6818ed936b279463a12a2677195eb6a4 217 Gene3D G3DSA:1.20.120.530 73 212 1.1E-23 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AMIS_34460 6818ed936b279463a12a2677195eb6a4 217 Gene3D G3DSA:1.10.10.10 2 72 2.2E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_57550 e63aa5d8cf848a1679872beeb12f313f 562 SUPERFAMILY SSF53448 119 379 1.05E-31 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_57550 e63aa5d8cf848a1679872beeb12f313f 562 Gene3D G3DSA:3.90.550.10 106 335 2.7E-49 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_57550 e63aa5d8cf848a1679872beeb12f313f 562 Pfam PF13506 Glycosyl transferase family 21 184 350 7.8E-19 T 14-10-2018 IPR025993 Ceramide glucosyltransferase GO:0016757 KEGG: 00600+2.4.1.80|MetaCyc: PWY-5129|MetaCyc: PWY-7836|MetaCyc: PWY-7838|MetaCyc: PWY-7839|MetaCyc: PWY-7841|Reactome: R-HSA-1660662 AMIS_65970 639d61de683afb58ff865a51a9b26f11 610 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 539 1.9E-127 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 AMIS_65970 639d61de683afb58ff865a51a9b26f11 610 TIGRFAM TIGR03104 trio_amidotrans: asparagine synthase family amidotransferase 1 607 2.3E-285 T 14-10-2018 IPR017535 Asparagine synthase family amidotransferase AMIS_65970 639d61de683afb58ff865a51a9b26f11 610 PIRSF PIRSF001589 1 610 1.6E-205 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 AMIS_65970 639d61de683afb58ff865a51a9b26f11 610 Pfam PF00733 Asparagine synthase 262 606 7.7E-87 T 14-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 AMIS_65970 639d61de683afb58ff865a51a9b26f11 610 Pfam PF13537 Glutamine amidotransferase domain 47 167 2.0E-42 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain AMIS_65970 639d61de683afb58ff865a51a9b26f11 610 SUPERFAMILY SSF52402 253 591 6.4E-74 T 14-10-2018 AMIS_65970 639d61de683afb58ff865a51a9b26f11 610 Gene3D G3DSA:3.60.20.10 8 192 1.2E-57 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMIS_65970 639d61de683afb58ff865a51a9b26f11 610 SUPERFAMILY SSF56235 1 234 5.49E-60 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMIS_76160 58cd0ca433aff2a5c66b69f10a20db61 308 Pfam PF00669 Bacterial flagellin N-terminal helical region 11 133 5.1E-12 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AMIS_76160 58cd0ca433aff2a5c66b69f10a20db61 308 SUPERFAMILY SSF64518 6 308 8.24E-52 T 14-10-2018 AMIS_76160 58cd0ca433aff2a5c66b69f10a20db61 308 Gene3D G3DSA:1.20.1330.10 44 272 1.5E-33 T 14-10-2018 AMIS_76160 58cd0ca433aff2a5c66b69f10a20db61 308 Pfam PF00700 Bacterial flagellin C-terminal helical region 225 307 4.9E-9 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AMIS_45670 f365f2356cda0139b71bce435272d3b7 158 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 7 57 6.2E-7 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AMIS_45670 f365f2356cda0139b71bce435272d3b7 158 Gene3D G3DSA:1.10.150.120 75 158 1.9E-25 T 14-10-2018 AMIS_45670 f365f2356cda0139b71bce435272d3b7 158 Pfam PF01799 [2Fe-2S] binding domain 75 152 4.6E-24 T 14-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AMIS_45670 f365f2356cda0139b71bce435272d3b7 158 Gene3D G3DSA:3.10.20.30 1 74 1.2E-18 T 14-10-2018 IPR012675 Beta-grasp domain superfamily AMIS_45670 f365f2356cda0139b71bce435272d3b7 158 SUPERFAMILY SSF47741 88 157 4.97E-26 T 14-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily AMIS_45670 f365f2356cda0139b71bce435272d3b7 158 SUPERFAMILY SSF54292 4 84 1.25E-19 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AMIS_65880 7ac1735d4acb905ffd401183d577a1a4 336 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 14-10-2018 AMIS_65880 7ac1735d4acb905ffd401183d577a1a4 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 47 1.8E-14 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_65880 7ac1735d4acb905ffd401183d577a1a4 336 SMART SM00354 2 69 1.7E-20 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_65880 7ac1735d4acb905ffd401183d577a1a4 336 SUPERFAMILY SSF53822 59 334 1.33E-60 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_65880 7ac1735d4acb905ffd401183d577a1a4 336 Pfam PF13377 Periplasmic binding protein-like domain 173 330 1.0E-34 T 14-10-2018 AMIS_65880 7ac1735d4acb905ffd401183d577a1a4 336 Gene3D G3DSA:3.40.50.2300 60 322 1.6E-66 T 14-10-2018 AMIS_65880 7ac1735d4acb905ffd401183d577a1a4 336 SUPERFAMILY SSF47413 5 48 1.13E-11 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_65880 7ac1735d4acb905ffd401183d577a1a4 336 Gene3D G3DSA:1.10.260.40 2 56 2.4E-15 T 14-10-2018 AMIS_65880 7ac1735d4acb905ffd401183d577a1a4 336 Gene3D G3DSA:3.40.50.2300 163 327 1.6E-66 T 14-10-2018 AMIS_77570 236b592ca8f5d1a57b2f089b5072fd8e 384 SUPERFAMILY SSF47203 235 373 1.77E-21 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMIS_77570 236b592ca8f5d1a57b2f089b5072fd8e 384 Gene3D G3DSA:2.40.110.10 119 220 8.1E-24 T 14-10-2018 AMIS_77570 236b592ca8f5d1a57b2f089b5072fd8e 384 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 241 352 1.4E-14 T 14-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain AMIS_77570 236b592ca8f5d1a57b2f089b5072fd8e 384 Gene3D G3DSA:1.10.540.10 1 118 5.1E-27 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMIS_77570 236b592ca8f5d1a57b2f089b5072fd8e 384 SUPERFAMILY SSF56645 5 222 4.19E-45 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMIS_77570 236b592ca8f5d1a57b2f089b5072fd8e 384 PIRSF PIRSF016578 1 95 5.2E-12 T 14-10-2018 AMIS_77570 236b592ca8f5d1a57b2f089b5072fd8e 384 PIRSF PIRSF016578 136 380 1.2E-33 T 14-10-2018 AMIS_77570 236b592ca8f5d1a57b2f089b5072fd8e 384 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 3 82 4.4E-11 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMIS_77570 236b592ca8f5d1a57b2f089b5072fd8e 384 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 120 210 2.3E-17 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMIS_77570 236b592ca8f5d1a57b2f089b5072fd8e 384 Gene3D G3DSA:1.20.140.10 226 378 2.2E-27 T 14-10-2018 AMIS_35150 4cce5835f95d6e6a2f064d119983279b 339 Gene3D G3DSA:3.40.50.1100 66 166 1.4E-92 T 14-10-2018 AMIS_35150 4cce5835f95d6e6a2f064d119983279b 339 Gene3D G3DSA:3.40.50.1100 24 335 1.4E-92 T 14-10-2018 AMIS_35150 4cce5835f95d6e6a2f064d119983279b 339 SUPERFAMILY SSF53686 30 334 3.54E-56 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMIS_35150 4cce5835f95d6e6a2f064d119983279b 339 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 30 331 2.4E-63 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AMIS_34890 a118301c7e72a787fc4c3c239f688f0e 139 Pfam PF04237 YjbR 22 120 1.9E-7 T 14-10-2018 IPR007351 Uncharacterised protein YjbR AMIS_14820 f1de02f9f12587753ecf4de7e16fe2da 175 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 57 7.2E-15 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_14820 f1de02f9f12587753ecf4de7e16fe2da 175 SUPERFAMILY SSF46689 3 69 1.2E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_14820 f1de02f9f12587753ecf4de7e16fe2da 175 ProSitePatterns PS01081 TetR-type HTH domain signature. 24 54 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMIS_14820 f1de02f9f12587753ecf4de7e16fe2da 175 Gene3D G3DSA:1.10.357.10 1 175 2.2E-44 T 14-10-2018 AMIS_14820 f1de02f9f12587753ecf4de7e16fe2da 175 SUPERFAMILY SSF48498 76 175 3.15E-9 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_14820 f1de02f9f12587753ecf4de7e16fe2da 175 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 9.4E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_14820 f1de02f9f12587753ecf4de7e16fe2da 175 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 9.4E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_15730 431bd8efb4b63c788b0d336d62515c34 479 SUPERFAMILY SSF50800 74 168 3.66E-26 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily AMIS_15730 431bd8efb4b63c788b0d336d62515c34 479 PRINTS PR01050 Pyruvate kinase family signature 270 294 4.9E-66 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMIS_15730 431bd8efb4b63c788b0d336d62515c34 479 PRINTS PR01050 Pyruvate kinase family signature 188 202 4.9E-66 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMIS_15730 431bd8efb4b63c788b0d336d62515c34 479 PRINTS PR01050 Pyruvate kinase family signature 62 78 4.9E-66 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMIS_15730 431bd8efb4b63c788b0d336d62515c34 479 PRINTS PR01050 Pyruvate kinase family signature 245 269 4.9E-66 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMIS_15730 431bd8efb4b63c788b0d336d62515c34 479 PRINTS PR01050 Pyruvate kinase family signature 314 330 4.9E-66 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMIS_15730 431bd8efb4b63c788b0d336d62515c34 479 PRINTS PR01050 Pyruvate kinase family signature 218 244 4.9E-66 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMIS_15730 431bd8efb4b63c788b0d336d62515c34 479 PRINTS PR01050 Pyruvate kinase family signature 295 313 4.9E-66 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMIS_15730 431bd8efb4b63c788b0d336d62515c34 479 Pfam PF02887 Pyruvate kinase, alpha/beta domain 357 468 5.6E-24 T 14-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMIS_15730 431bd8efb4b63c788b0d336d62515c34 479 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 5 469 1.1E-164 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMIS_15730 431bd8efb4b63c788b0d336d62515c34 479 Gene3D G3DSA:2.40.33.10 73 170 5.1E-168 T 14-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMIS_15730 431bd8efb4b63c788b0d336d62515c34 479 Pfam PF00224 Pyruvate kinase, barrel domain 5 338 1.1E-122 T 14-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMIS_15730 431bd8efb4b63c788b0d336d62515c34 479 Gene3D G3DSA:3.40.1380.20 337 466 5.1E-168 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMIS_15730 431bd8efb4b63c788b0d336d62515c34 479 SUPERFAMILY SSF51621 3 338 6.63E-96 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AMIS_15730 431bd8efb4b63c788b0d336d62515c34 479 Gene3D G3DSA:3.20.20.60 5 336 5.1E-168 T 14-10-2018 AMIS_15730 431bd8efb4b63c788b0d336d62515c34 479 ProSitePatterns PS00110 Pyruvate kinase active site signature. 216 228 - T 14-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMIS_15730 431bd8efb4b63c788b0d336d62515c34 479 SUPERFAMILY SSF52935 344 470 1.31E-34 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMIS_36310 824ecb3e0258c266e2bb45aa3742b898 208 Gene3D G3DSA:3.40.50.1240 1 208 1.0E-37 T 14-10-2018 IPR029033 Histidine phosphatase superfamily AMIS_36310 824ecb3e0258c266e2bb45aa3742b898 208 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 191 1.3E-35 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AMIS_36310 824ecb3e0258c266e2bb45aa3742b898 208 SMART SM00855 3 160 5.0E-15 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AMIS_36310 824ecb3e0258c266e2bb45aa3742b898 208 SUPERFAMILY SSF53254 1 207 3.4E-41 T 14-10-2018 IPR029033 Histidine phosphatase superfamily AMIS_36310 824ecb3e0258c266e2bb45aa3742b898 208 PIRSF PIRSF000709 1 80 1.6E-5 T 14-10-2018 AMIS_49780 1d503e98aa74ab7e0d4d33f1db115f0f 522 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 447 457 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site AMIS_49780 1d503e98aa74ab7e0d4d33f1db115f0f 522 Pfam PF00082 Subtilase family 209 485 9.5E-32 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AMIS_49780 1d503e98aa74ab7e0d4d33f1db115f0f 522 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 214 225 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site AMIS_49780 1d503e98aa74ab7e0d4d33f1db115f0f 522 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 255 265 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site AMIS_49780 1d503e98aa74ab7e0d4d33f1db115f0f 522 Gene3D G3DSA:3.40.50.200 176 517 5.3E-71 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AMIS_49780 1d503e98aa74ab7e0d4d33f1db115f0f 522 PRINTS PR00723 Subtilisin serine protease family (S8) signature 446 462 1.6E-15 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMIS_49780 1d503e98aa74ab7e0d4d33f1db115f0f 522 PRINTS PR00723 Subtilisin serine protease family (S8) signature 251 264 1.6E-15 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMIS_49780 1d503e98aa74ab7e0d4d33f1db115f0f 522 PRINTS PR00723 Subtilisin serine protease family (S8) signature 209 228 1.6E-15 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMIS_49780 1d503e98aa74ab7e0d4d33f1db115f0f 522 SUPERFAMILY SSF52743 156 515 2.88E-60 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AMIS_48750 fa8ab6917ab6f4ea9b4279f1d5bb94c5 441 Pfam PF13533 Biotin-lipoyl like 71 115 1.7E-8 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AMIS_48750 fa8ab6917ab6f4ea9b4279f1d5bb94c5 441 Gene3D G3DSA:2.40.50.100 68 101 2.1E-14 T 14-10-2018 AMIS_48750 fa8ab6917ab6f4ea9b4279f1d5bb94c5 441 Gene3D G3DSA:2.40.50.100 271 305 5.2E-37 T 14-10-2018 AMIS_48750 fa8ab6917ab6f4ea9b4279f1d5bb94c5 441 Gene3D G3DSA:1.10.287.470 102 138 2.1E-14 T 14-10-2018 AMIS_48750 fa8ab6917ab6f4ea9b4279f1d5bb94c5 441 Gene3D G3DSA:1.10.287.470 244 270 5.2E-37 T 14-10-2018 AMIS_48750 fa8ab6917ab6f4ea9b4279f1d5bb94c5 441 SUPERFAMILY SSF111369 57 138 1.29E-6 T 14-10-2018 AMIS_48750 fa8ab6917ab6f4ea9b4279f1d5bb94c5 441 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 258 347 1.1E-9 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMIS_48750 fa8ab6917ab6f4ea9b4279f1d5bb94c5 441 Gene3D G3DSA:2.40.30.170 306 383 5.2E-37 T 14-10-2018 AMIS_48750 fa8ab6917ab6f4ea9b4279f1d5bb94c5 441 Gene3D G3DSA:2.40.30.170 57 67 2.1E-14 T 14-10-2018 AMIS_48750 fa8ab6917ab6f4ea9b4279f1d5bb94c5 441 SUPERFAMILY SSF111369 247 381 1.83E-5 T 14-10-2018 AMIS_48750 fa8ab6917ab6f4ea9b4279f1d5bb94c5 441 Gene3D G3DSA:2.40.420.20 384 437 5.2E-37 T 14-10-2018 AMIS_64600 baf518d07bf92556bc92c9bf4ad6c8f6 1023 Pfam PF04434 SWIM zinc finger 52 79 7.4E-7 T 14-10-2018 IPR007527 Zinc finger, SWIM-type GO:0008270 AMIS_12140 a920e3cec1d70e05c2081486b22d1c27 405 Gene3D G3DSA:3.30.565.10 252 389 2.9E-24 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_12140 a920e3cec1d70e05c2081486b22d1c27 405 Pfam PF07730 Histidine kinase 187 253 4.3E-15 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMIS_12140 a920e3cec1d70e05c2081486b22d1c27 405 SUPERFAMILY SSF55874 254 377 5.42E-10 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_68830 4d8095d42c9b4f6996eb5b380a89ca3b 854 SUPERFAMILY SSF56059 639 835 8.25E-30 T 14-10-2018 AMIS_68830 4d8095d42c9b4f6996eb5b380a89ca3b 854 Gene3D G3DSA:3.30.470.20 638 833 1.1E-62 T 14-10-2018 AMIS_68830 4d8095d42c9b4f6996eb5b380a89ca3b 854 Gene3D G3DSA:3.30.1490.20 652 721 1.1E-62 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AMIS_68830 4d8095d42c9b4f6996eb5b380a89ca3b 854 SUPERFAMILY SSF55729 22 162 1.61E-24 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_68830 4d8095d42c9b4f6996eb5b380a89ca3b 854 SMART SM00881 197 292 5.0E-23 T 14-10-2018 IPR003781 CoA-binding GO:0048037 AMIS_68830 4d8095d42c9b4f6996eb5b380a89ca3b 854 Pfam PF13549 ATP-grasp domain 637 833 3.7E-52 T 14-10-2018 AMIS_68830 4d8095d42c9b4f6996eb5b380a89ca3b 854 SUPERFAMILY SSF51735 188 329 2.29E-27 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_68830 4d8095d42c9b4f6996eb5b380a89ca3b 854 Gene3D G3DSA:3.40.50.261 323 480 6.5E-47 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AMIS_68830 4d8095d42c9b4f6996eb5b380a89ca3b 854 Pfam PF13380 CoA binding domain 202 327 7.5E-16 T 14-10-2018 IPR003781 CoA-binding GO:0048037 AMIS_68830 4d8095d42c9b4f6996eb5b380a89ca3b 854 Gene3D G3DSA:3.40.50.261 515 616 3.6E-9 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AMIS_68830 4d8095d42c9b4f6996eb5b380a89ca3b 854 Pfam PF00583 Acetyltransferase (GNAT) family 49 155 2.6E-11 T 14-10-2018 IPR000182 GNAT domain AMIS_68830 4d8095d42c9b4f6996eb5b380a89ca3b 854 SUPERFAMILY SSF52210 483 616 1.83E-12 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AMIS_68830 4d8095d42c9b4f6996eb5b380a89ca3b 854 Gene3D G3DSA:3.40.50.720 195 321 1.1E-34 T 14-10-2018 AMIS_68830 4d8095d42c9b4f6996eb5b380a89ca3b 854 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 345 476 1.4E-39 T 14-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain AMIS_68830 4d8095d42c9b4f6996eb5b380a89ca3b 854 SUPERFAMILY SSF52210 324 480 6.8E-34 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AMIS_68830 4d8095d42c9b4f6996eb5b380a89ca3b 854 Gene3D G3DSA:3.40.630.30 11 194 1.6E-51 T 14-10-2018 AMIS_2480 7b9ab1d3cadee36356946e3055a8a6d8 954 Gene3D G3DSA:2.60.40.10 739 824 4.7E-19 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_2480 7b9ab1d3cadee36356946e3055a8a6d8 954 SMART SM00060 741 815 1.2E-6 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 AMIS_2480 7b9ab1d3cadee36356946e3055a8a6d8 954 SUPERFAMILY SSF49265 736 815 1.17E-12 T 14-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 AMIS_18950 17773cf5bebbabf526c48aa85a0f679d 284 SMART SM00422 10 80 3.4E-11 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_18950 17773cf5bebbabf526c48aa85a0f679d 284 Gene3D G3DSA:1.10.1660.10 10 122 1.6E-18 T 14-10-2018 AMIS_18950 17773cf5bebbabf526c48aa85a0f679d 284 SUPERFAMILY SSF55136 151 278 9.94E-9 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily AMIS_18950 17773cf5bebbabf526c48aa85a0f679d 284 SMART SM00871 120 278 1.8E-5 T 14-10-2018 IPR010499 Bacterial transcription activator, effector binding AMIS_18950 17773cf5bebbabf526c48aa85a0f679d 284 SUPERFAMILY SSF46955 9 112 4.76E-20 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily AMIS_18950 17773cf5bebbabf526c48aa85a0f679d 284 Pfam PF13411 MerR HTH family regulatory protein 11 78 7.8E-13 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_18950 17773cf5bebbabf526c48aa85a0f679d 284 Gene3D G3DSA:3.20.80.10 123 279 3.8E-25 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily AMIS_64520 d8827183a0d07278f045042430685c43 202 SMART SM00044 4 174 0.0032 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMIS_64520 d8827183a0d07278f045042430685c43 202 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 9 181 5.0E-21 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMIS_64520 d8827183a0d07278f045042430685c43 202 Gene3D G3DSA:3.30.70.1230 8 200 3.3E-40 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_64520 d8827183a0d07278f045042430685c43 202 SUPERFAMILY SSF55073 9 191 7.06E-40 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_41100 96c5f98440783c3489e05d8ffa306945 245 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 130 160 - T 14-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 AMIS_41100 96c5f98440783c3489e05d8ffa306945 245 Gene3D G3DSA:3.20.20.70 1 237 2.0E-52 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_41100 96c5f98440783c3489e05d8ffa306945 245 PRINTS PR00146 Dihydrodipicolinate synthase signature 125 142 1.7E-12 T 14-10-2018 IPR002220 DapA-like GO:0016829 AMIS_41100 96c5f98440783c3489e05d8ffa306945 245 PRINTS PR00146 Dihydrodipicolinate synthase signature 36 57 1.7E-12 T 14-10-2018 IPR002220 DapA-like GO:0016829 AMIS_41100 96c5f98440783c3489e05d8ffa306945 245 PRINTS PR00146 Dihydrodipicolinate synthase signature 100 116 1.7E-12 T 14-10-2018 IPR002220 DapA-like GO:0016829 AMIS_41100 96c5f98440783c3489e05d8ffa306945 245 SMART SM01130 2 244 1.1E-34 T 14-10-2018 IPR002220 DapA-like GO:0016829 AMIS_41100 96c5f98440783c3489e05d8ffa306945 245 Pfam PF00701 Dihydrodipicolinate synthetase family 3 225 2.2E-37 T 14-10-2018 IPR002220 DapA-like GO:0016829 AMIS_41100 96c5f98440783c3489e05d8ffa306945 245 SUPERFAMILY SSF51569 1 224 6.91E-46 T 14-10-2018 AMIS_63890 4969bc7c245ef75315c038a70b658a53 756 SMART SM00642 11 660 3.7E-6 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMIS_63890 4969bc7c245ef75315c038a70b658a53 756 SUPERFAMILY SSF51445 7 674 1.44E-126 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_63890 4969bc7c245ef75315c038a70b658a53 756 Gene3D G3DSA:1.10.10.470 491 581 1.7E-177 T 14-10-2018 AMIS_63890 4969bc7c245ef75315c038a70b658a53 756 Gene3D G3DSA:1.10.150.200 315 447 1.7E-177 T 14-10-2018 AMIS_63890 4969bc7c245ef75315c038a70b658a53 756 Gene3D G3DSA:3.30.1590.10 90 209 1.7E-177 T 14-10-2018 AMIS_63890 4969bc7c245ef75315c038a70b658a53 756 TIGRFAM TIGR02401 trehalose_TreY: malto-oligosyltrehalose synthase 4 755 1.2E-260 T 14-10-2018 IPR012767 Maltooligosyl trehalose synthase KEGG: 00500+5.4.99.15|MetaCyc: PWY-2661 AMIS_63890 4969bc7c245ef75315c038a70b658a53 756 Gene3D G3DSA:3.20.20.80 7 672 1.7E-177 T 14-10-2018 AMIS_63890 4969bc7c245ef75315c038a70b658a53 756 Pfam PF00128 Alpha amylase, catalytic domain 26 235 2.7E-16 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMIS_32680 c2eda6890dab8965ef035633c9d9fa4f 131 SUPERFAMILY SSF54593 1 125 1.15E-23 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_32680 c2eda6890dab8965ef035633c9d9fa4f 131 Gene3D G3DSA:3.10.180.10 1 127 7.6E-37 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_32680 c2eda6890dab8965ef035633c9d9fa4f 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 121 1.4E-11 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMIS_67280 58f82b779e36655288747129ce1abd32 373 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 106 337 3.1E-32 T 14-10-2018 IPR018713 Domain of unknown function DUF2236 AMIS_76280 32ed72ebdb11f6d40056eda3b68add37 215 Pfam PF02108 Flagellar assembly protein FliH 84 208 2.4E-15 T 14-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE AMIS_10340 26148376785a0f61b677c5f6ecf8b736 364 Gene3D G3DSA:3.30.420.40 276 355 1.1E-10 T 14-10-2018 AMIS_10340 26148376785a0f61b677c5f6ecf8b736 364 Pfam PF00480 ROK family 78 271 7.1E-28 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AMIS_10340 26148376785a0f61b677c5f6ecf8b736 364 Gene3D G3DSA:1.10.10.10 1 70 1.5E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_10340 26148376785a0f61b677c5f6ecf8b736 364 SUPERFAMILY SSF46785 1 66 1.29E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_10340 26148376785a0f61b677c5f6ecf8b736 364 SUPERFAMILY SSF53067 77 197 1.65E-16 T 14-10-2018 AMIS_10340 26148376785a0f61b677c5f6ecf8b736 364 Gene3D G3DSA:3.30.420.40 205 275 6.8E-24 T 14-10-2018 AMIS_10340 26148376785a0f61b677c5f6ecf8b736 364 SUPERFAMILY SSF53067 207 357 8.24E-35 T 14-10-2018 AMIS_10340 26148376785a0f61b677c5f6ecf8b736 364 Gene3D G3DSA:3.30.420.40 75 204 8.5E-21 T 14-10-2018 AMIS_58340 43ee611507f137becffbcc8a50d412c4 221 SUPERFAMILY SSF56112 2 180 7.82E-26 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMIS_58340 43ee611507f137becffbcc8a50d412c4 221 Pfam PF01636 Phosphotransferase enzyme family 5 102 2.9E-5 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase AMIS_58340 43ee611507f137becffbcc8a50d412c4 221 Pfam PF01636 Phosphotransferase enzyme family 107 172 1.4E-10 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase AMIS_58340 43ee611507f137becffbcc8a50d412c4 221 Gene3D G3DSA:1.10.510.10 87 175 7.9E-7 T 14-10-2018 AMIS_42820 2a77704776edc26252a9a74b38a98dc3 242 SUPERFAMILY SSF50494 20 239 1.85E-33 T 14-10-2018 IPR009003 Peptidase S1, PA clan AMIS_42820 2a77704776edc26252a9a74b38a98dc3 242 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 53 68 4.1E-6 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AMIS_42820 2a77704776edc26252a9a74b38a98dc3 242 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 101 115 4.1E-6 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AMIS_42820 2a77704776edc26252a9a74b38a98dc3 242 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 187 199 4.1E-6 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AMIS_42820 2a77704776edc26252a9a74b38a98dc3 242 Pfam PF00089 Trypsin 36 234 8.7E-27 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 AMIS_42820 2a77704776edc26252a9a74b38a98dc3 242 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 63 68 - T 14-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 AMIS_42820 2a77704776edc26252a9a74b38a98dc3 242 Gene3D G3DSA:2.40.10.10 36 215 1.9E-27 T 14-10-2018 AMIS_42820 2a77704776edc26252a9a74b38a98dc3 242 Gene3D G3DSA:2.40.10.10 39 121 1.9E-27 T 14-10-2018 AMIS_42820 2a77704776edc26252a9a74b38a98dc3 242 SMART SM00020 28 234 2.2E-15 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 AMIS_80490 febd036516d85e8dbc4d2ae9babe6c2e 117 Pfam PF06262 Zincin-like metallopeptidase 29 116 2.7E-31 T 14-10-2018 IPR010428 Zincin-like metallopeptidase AMIS_80490 febd036516d85e8dbc4d2ae9babe6c2e 117 SUPERFAMILY SSF55486 3 116 1.47E-39 T 14-10-2018 AMIS_80490 febd036516d85e8dbc4d2ae9babe6c2e 117 Gene3D G3DSA:3.30.2010.20 2 116 1.2E-40 T 14-10-2018 IPR038555 Zincin-like metallopeptidase superfamily AMIS_68440 d598734c524d689d6b76b9c0eb11cc37 445 Gene3D G3DSA:3.40.50.150 93 439 7.3E-58 T 14-10-2018 AMIS_68440 d598734c524d689d6b76b9c0eb11cc37 445 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 283 444 1.2E-8 T 14-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 AMIS_68440 d598734c524d689d6b76b9c0eb11cc37 445 SUPERFAMILY SSF50249 7 71 1.03E-12 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMIS_68440 d598734c524d689d6b76b9c0eb11cc37 445 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 427 437 - T 14-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site AMIS_68440 d598734c524d689d6b76b9c0eb11cc37 445 Gene3D G3DSA:2.40.50.140 3 90 7.0E-20 T 14-10-2018 AMIS_68440 d598734c524d689d6b76b9c0eb11cc37 445 SUPERFAMILY SSF53335 78 444 1.51E-49 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_68440 d598734c524d689d6b76b9c0eb11cc37 445 Gene3D G3DSA:3.40.1350.30 163 278 7.3E-58 T 14-10-2018 AMIS_68440 d598734c524d689d6b76b9c0eb11cc37 445 Pfam PF01938 TRAM domain 13 70 7.8E-13 T 14-10-2018 IPR002792 TRAM domain AMIS_8680 d64de13b35e8c5ed39e81f79c66b10b0 313 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 8 300 3.9E-37 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AMIS_8680 d64de13b35e8c5ed39e81f79c66b10b0 313 SUPERFAMILY SSF161111 6 220 2.09E-35 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AMIS_8680 d64de13b35e8c5ed39e81f79c66b10b0 313 Gene3D G3DSA:3.30.70.1350 221 301 3.5E-5 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 AMIS_8680 d64de13b35e8c5ed39e81f79c66b10b0 313 SUPERFAMILY SSF160240 223 298 1.57E-9 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 AMIS_8680 d64de13b35e8c5ed39e81f79c66b10b0 313 Gene3D G3DSA:1.20.1510.10 7 219 2.0E-30 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AMIS_8680 d64de13b35e8c5ed39e81f79c66b10b0 313 Pfam PF01545 Cation efflux family 10 219 8.5E-32 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AMIS_33810 0921f669e720f6c3f2174e1a3df8ae88 630 Gene3D G3DSA:1.25.10.10 242 384 2.1E-5 T 14-10-2018 IPR011989 Armadillo-like helical AMIS_33810 0921f669e720f6c3f2174e1a3df8ae88 630 Gene3D G3DSA:1.25.10.10 50 239 1.9E-5 T 14-10-2018 IPR011989 Armadillo-like helical AMIS_33810 0921f669e720f6c3f2174e1a3df8ae88 630 SUPERFAMILY SSF48371 262 348 4.22E-5 T 14-10-2018 IPR016024 Armadillo-type fold AMIS_33810 0921f669e720f6c3f2174e1a3df8ae88 630 SUPERFAMILY SSF48371 69 197 2.44E-6 T 14-10-2018 IPR016024 Armadillo-type fold AMIS_75080 ace501c35120d50c29e0d82485c9c700 315 Gene3D G3DSA:3.30.230.10 10 176 4.5E-57 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMIS_75080 ace501c35120d50c29e0d82485c9c700 315 Pfam PF00288 GHMP kinases N terminal domain 103 161 1.9E-6 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 AMIS_75080 ace501c35120d50c29e0d82485c9c700 315 SUPERFAMILY SSF55060 181 299 4.89E-24 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily AMIS_75080 ace501c35120d50c29e0d82485c9c700 315 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 19 305 30.19 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 AMIS_75080 ace501c35120d50c29e0d82485c9c700 315 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 20 290 3.4E-53 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 AMIS_75080 ace501c35120d50c29e0d82485c9c700 315 PIRSF PIRSF010376 18 315 3.7E-76 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 AMIS_75080 ace501c35120d50c29e0d82485c9c700 315 SUPERFAMILY SSF54211 19 174 6.15E-40 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMIS_75080 ace501c35120d50c29e0d82485c9c700 315 Pfam PF08544 GHMP kinases C terminal 222 297 2.7E-9 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain AMIS_75080 ace501c35120d50c29e0d82485c9c700 315 Gene3D G3DSA:3.30.70.890 179 315 3.5E-42 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily AMIS_45410 46812229612445c1564400a2885af10c 250 Pfam PF08241 Methyltransferase domain 38 129 1.3E-22 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 AMIS_45410 46812229612445c1564400a2885af10c 250 SUPERFAMILY SSF53335 11 237 7.12E-41 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_45410 46812229612445c1564400a2885af10c 250 Gene3D G3DSA:3.40.50.150 4 208 1.7E-37 T 14-10-2018 AMIS_78280 4abc48b789339ae1b3cda7313c95a1bd 379 SUPERFAMILY SSF52540 15 294 2.56E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_78280 4abc48b789339ae1b3cda7313c95a1bd 379 Gene3D G3DSA:3.40.50.300 3 379 2.4E-76 T 14-10-2018 AMIS_78280 4abc48b789339ae1b3cda7313c95a1bd 379 Pfam PF02374 Anion-transporting ATPase 18 291 8.5E-25 T 14-10-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 AMIS_36680 cb7c5ade6558877fd419ca668d5f435e 187 TIGRFAM TIGR02423 protocat_alph: protocatechuate 3,4-dioxygenase, alpha subunit 5 178 6.0E-53 T 14-10-2018 IPR012786 Protocatechuate 3,4-dioxygenase, alpha subunit GO:0005506|GO:0018578|GO:0019439|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|MetaCyc: PWY-6041 AMIS_36680 cb7c5ade6558877fd419ca668d5f435e 187 SUPERFAMILY SSF49482 4 177 1.44E-41 T 14-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AMIS_36680 cb7c5ade6558877fd419ca668d5f435e 187 Gene3D G3DSA:2.60.130.10 1 179 3.0E-55 T 14-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AMIS_36680 cb7c5ade6558877fd419ca668d5f435e 187 Pfam PF00775 Dioxygenase 34 102 3.1E-13 T 14-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 AMIS_5320 520319a461c16320bc49c84d992e173e 70 Gene3D G3DSA:3.30.70.100 5 66 9.6E-22 T 14-10-2018 AMIS_5320 520319a461c16320bc49c84d992e173e 70 Pfam PF00403 Heavy-metal-associated domain 6 66 5.2E-16 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AMIS_5320 520319a461c16320bc49c84d992e173e 70 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 6 67 2.3E-18 T 14-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 AMIS_5320 520319a461c16320bc49c84d992e173e 70 SUPERFAMILY SSF55008 3 67 3.8E-19 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 AMIS_5320 520319a461c16320bc49c84d992e173e 70 PRINTS PR00944 Copper ion binding protein signature 29 42 4.0E-11 T 14-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 AMIS_5320 520319a461c16320bc49c84d992e173e 70 PRINTS PR00944 Copper ion binding protein signature 42 54 4.0E-11 T 14-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 AMIS_5320 520319a461c16320bc49c84d992e173e 70 PRINTS PR00944 Copper ion binding protein signature 4 16 4.0E-11 T 14-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 AMIS_5320 520319a461c16320bc49c84d992e173e 70 PRINTS PR00944 Copper ion binding protein signature 16 29 4.0E-11 T 14-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 AMIS_5320 520319a461c16320bc49c84d992e173e 70 PRINTS PR00944 Copper ion binding protein signature 54 67 4.0E-11 T 14-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 AMIS_5320 520319a461c16320bc49c84d992e173e 70 ProSitePatterns PS01047 Heavy-metal-associated domain. 9 38 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AMIS_76970 093ff2710bd42ad6bceaefd20983a662 113 Gene3D G3DSA:2.60.40.1120 34 110 7.4E-6 T 14-10-2018 AMIS_76970 093ff2710bd42ad6bceaefd20983a662 113 Pfam PF07210 Protein of unknown function (DUF1416) 14 110 7.7E-40 T 14-10-2018 IPR010814 Protein of unknown function DUF1416 AMIS_76970 093ff2710bd42ad6bceaefd20983a662 113 SUPERFAMILY SSF49478 35 100 2.94E-8 T 14-10-2018 AMIS_58540 828c89e6e08dac18c147747eb45bb454 333 SUPERFAMILY SSF52540 7 236 1.01E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_58540 828c89e6e08dac18c147747eb45bb454 333 Pfam PF00005 ABC transporter 31 174 1.8E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_58540 828c89e6e08dac18c147747eb45bb454 333 Pfam PF13732 Domain of unknown function (DUF4162) 229 321 1.7E-6 T 14-10-2018 IPR025302 Domain of unknown function DUF4162 AMIS_58540 828c89e6e08dac18c147747eb45bb454 333 TIGRFAM TIGR01188 drrA: daunorubicin resistance ABC transporter, ATP-binding protein 23 325 2.0E-106 T 14-10-2018 IPR005894 Daunorubicin resistance ABC transporter ATP-binding subunit DrrA GO:0005524|GO:0043215|GO:1900753 AMIS_58540 828c89e6e08dac18c147747eb45bb454 333 Gene3D G3DSA:3.40.50.300 4 244 2.4E-61 T 14-10-2018 AMIS_58540 828c89e6e08dac18c147747eb45bb454 333 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_58540 828c89e6e08dac18c147747eb45bb454 333 SMART SM00382 40 223 6.8E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_26350 94e445fdccbfe48029d07d8b07f413f9 1031 Gene3D G3DSA:2.60.40.10 32 140 3.4E-27 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_26350 94e445fdccbfe48029d07d8b07f413f9 1031 Gene3D G3DSA:1.50.10.10 141 273 6.4E-27 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 AMIS_26350 94e445fdccbfe48029d07d8b07f413f9 1031 Gene3D G3DSA:1.50.10.10 336 1031 9.5E-169 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 AMIS_26350 94e445fdccbfe48029d07d8b07f413f9 1031 Pfam PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain 583 925 3.8E-60 T 14-10-2018 IPR035396 Alpha-L-rhamnosidase, six-hairpin glycosidase domain AMIS_26350 94e445fdccbfe48029d07d8b07f413f9 1031 Pfam PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain 470 576 1.1E-19 T 14-10-2018 IPR008902 Alpha-L-rhamnosidase, concanavalin-like domain AMIS_26350 94e445fdccbfe48029d07d8b07f413f9 1031 PIRSF PIRSF010631 341 1031 1.3E-132 T 14-10-2018 IPR016007 Alpha-L-rhamnosidase AMIS_26350 94e445fdccbfe48029d07d8b07f413f9 1031 PIRSF PIRSF010631 7 270 2.2E-61 T 14-10-2018 IPR016007 Alpha-L-rhamnosidase AMIS_26350 94e445fdccbfe48029d07d8b07f413f9 1031 SUPERFAMILY SSF48208 677 996 1.77E-32 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AMIS_26350 94e445fdccbfe48029d07d8b07f413f9 1031 Pfam PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain 929 999 2.5E-19 T 14-10-2018 IPR035398 Alpha-L-rhamnosidase C-terminal domain AMIS_26350 94e445fdccbfe48029d07d8b07f413f9 1031 Pfam PF08531 Alpha-L-rhamnosidase N-terminal domain 357 420 7.2E-14 T 14-10-2018 IPR013737 Bacterial alpha-L-rhamnosidase N-terminal AMIS_26350 94e445fdccbfe48029d07d8b07f413f9 1031 Pfam PF08531 Alpha-L-rhamnosidase N-terminal domain 178 248 7.3E-20 T 14-10-2018 IPR013737 Bacterial alpha-L-rhamnosidase N-terminal AMIS_14130 643c6026f76ce717aaa6b3738250ec6d 69 SUPERFAMILY SSF64307 2 57 4.84E-20 T 14-10-2018 IPR036868 TusA-like domain superfamily AMIS_14130 643c6026f76ce717aaa6b3738250ec6d 69 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 4 28 - T 14-10-2018 IPR001455 TusA-like domain AMIS_14130 643c6026f76ce717aaa6b3738250ec6d 69 Pfam PF01206 Sulfurtransferase TusA 2 57 3.7E-20 T 14-10-2018 IPR001455 TusA-like domain AMIS_14130 643c6026f76ce717aaa6b3738250ec6d 69 Gene3D G3DSA:3.30.110.40 1 68 3.0E-23 T 14-10-2018 IPR036868 TusA-like domain superfamily AMIS_80720 743a72ebad99ebb3b9a01693cc6d4646 228 Pfam PF01478 Type IV leader peptidase family 93 187 8.0E-7 T 14-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 AMIS_5610 5b5fee8ec8b058336969a57b5544a8e5 182 SUPERFAMILY SSF88659 113 170 5.01E-14 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_5610 5b5fee8ec8b058336969a57b5544a8e5 182 Pfam PF08281 Sigma-70, region 4 114 166 4.1E-14 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_5610 5b5fee8ec8b058336969a57b5544a8e5 182 SUPERFAMILY SSF88946 20 87 2.86E-15 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_5610 5b5fee8ec8b058336969a57b5544a8e5 182 Gene3D G3DSA:1.10.1740.10 9 93 3.9E-12 T 14-10-2018 AMIS_5610 5b5fee8ec8b058336969a57b5544a8e5 182 Gene3D G3DSA:1.10.10.10 111 176 8.8E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_5610 5b5fee8ec8b058336969a57b5544a8e5 182 Pfam PF04542 Sigma-70 region 2 25 90 5.1E-10 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_5610 5b5fee8ec8b058336969a57b5544a8e5 182 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 169 3.9E-20 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_4250 41e7698499a17e86859427a75a411725 344 Pfam PF04443 Acyl-protein synthetase, LuxE 4 339 4.7E-50 T 14-10-2018 IPR007534 Acyl-protein synthetase, LuxE GO:0008218|GO:0047474 MetaCyc: PWY-7723 AMIS_4250 41e7698499a17e86859427a75a411725 344 SUPERFAMILY SSF56801 63 310 1.28E-8 T 14-10-2018 AMIS_4250 41e7698499a17e86859427a75a411725 344 Gene3D G3DSA:3.40.50.12780 2 311 3.4E-16 T 14-10-2018 AMIS_27200 1c69f2ec8fea3f46d411b6709d696712 246 Gene3D G3DSA:3.40.50.10310 3 225 5.2E-58 T 14-10-2018 IPR024087 Creatininase-like superfamily KEGG: 00740+3.5.1.102|MetaCyc: PWY-6167 AMIS_27200 1c69f2ec8fea3f46d411b6709d696712 246 TIGRFAM TIGR03964 mycofact_creat: mycofactocin system creatininase family protein 5 232 6.9E-96 T 14-10-2018 IPR023871 Mycofactocin system creatininase family protein AMIS_27200 1c69f2ec8fea3f46d411b6709d696712 246 Pfam PF02633 Creatinine amidohydrolase 8 219 3.6E-58 T 14-10-2018 IPR003785 Creatininase/formamide hydrolase KEGG: 00740+3.5.1.102|MetaCyc: PWY-6167 AMIS_27200 1c69f2ec8fea3f46d411b6709d696712 246 SUPERFAMILY SSF102215 5 222 1.27E-57 T 14-10-2018 IPR024087 Creatininase-like superfamily KEGG: 00740+3.5.1.102|MetaCyc: PWY-6167 AMIS_60260 f0febb3f82bbeaee2a7abc9b762f4964 352 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 15 37 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 AMIS_60260 f0febb3f82bbeaee2a7abc9b762f4964 352 SMART SM00220 9 263 1.2E-39 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMIS_60260 f0febb3f82bbeaee2a7abc9b762f4964 352 Gene3D G3DSA:1.10.510.10 85 268 1.8E-40 T 14-10-2018 AMIS_60260 f0febb3f82bbeaee2a7abc9b762f4964 352 SUPERFAMILY SSF56112 6 292 5.66E-59 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMIS_60260 f0febb3f82bbeaee2a7abc9b762f4964 352 Pfam PF00069 Protein kinase domain 9 260 9.6E-39 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMIS_60260 f0febb3f82bbeaee2a7abc9b762f4964 352 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 127 139 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 AMIS_60260 f0febb3f82bbeaee2a7abc9b762f4964 352 Gene3D G3DSA:3.30.200.20 3 84 5.5E-13 T 14-10-2018 AMIS_73870 23dadf595e0b7878c41d6f511dc23a4a 198 SUPERFAMILY SSF46689 9 84 3.08E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_73870 23dadf595e0b7878c41d6f511dc23a4a 198 Gene3D G3DSA:1.10.357.10 5 198 5.9E-13 T 14-10-2018 AMIS_73870 23dadf595e0b7878c41d6f511dc23a4a 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 64 5.2E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_72630 e09ebaeb04141fe661b9b63ff014cc9f 382 SUPERFAMILY SSF49879 240 315 7.46E-8 T 14-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 AMIS_72630 e09ebaeb04141fe661b9b63ff014cc9f 382 Gene3D G3DSA:2.60.200.20 226 353 2.4E-7 T 14-10-2018 AMIS_51960 400f083e88aae500774903f93bdc9f7f 164 SUPERFAMILY SSF50405 34 162 2.22E-13 T 14-10-2018 IPR008999 Actin-crosslinking AMIS_51960 400f083e88aae500774903f93bdc9f7f 164 Gene3D G3DSA:2.80.10.50 22 164 1.3E-17 T 14-10-2018 AMIS_40280 5ba0493b9f64873f76b5d2ddc1a83eed 254 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 66 2.8E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_40280 5ba0493b9f64873f76b5d2ddc1a83eed 254 SUPERFAMILY SSF48498 88 179 1.24E-10 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_40280 5ba0493b9f64873f76b5d2ddc1a83eed 254 Gene3D G3DSA:1.10.357.10 62 189 1.5E-16 T 14-10-2018 AMIS_40280 5ba0493b9f64873f76b5d2ddc1a83eed 254 SUPERFAMILY SSF46689 9 88 1.23E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_40280 5ba0493b9f64873f76b5d2ddc1a83eed 254 Gene3D G3DSA:1.10.10.60 1 61 2.5E-11 T 14-10-2018 AMIS_6340 f4e6f46cd84b8586eebfbed77a1d624d 271 SUPERFAMILY SSF55120 5 260 9.35E-67 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMIS_6340 f4e6f46cd84b8586eebfbed77a1d624d 271 Pfam PF01416 tRNA pseudouridine synthase 152 254 2.5E-23 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMIS_6340 f4e6f46cd84b8586eebfbed77a1d624d 271 Gene3D G3DSA:3.30.70.580 3 113 6.1E-31 T 14-10-2018 AMIS_6340 f4e6f46cd84b8586eebfbed77a1d624d 271 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 8 248 5.7E-51 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMIS_6340 f4e6f46cd84b8586eebfbed77a1d624d 271 PIRSF PIRSF001430 4 270 6.6E-70 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMIS_6340 f4e6f46cd84b8586eebfbed77a1d624d 271 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 5 253 30.221 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMIS_6340 f4e6f46cd84b8586eebfbed77a1d624d 271 Gene3D G3DSA:3.30.70.660 114 252 2.4E-35 T 14-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 AMIS_50470 967b3f6c7e13e6ec2b3dded61e488ddf 348 SUPERFAMILY SSF51679 15 340 5.0E-61 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_50470 967b3f6c7e13e6ec2b3dded61e488ddf 348 Gene3D G3DSA:3.20.20.30 2 342 2.1E-74 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_50470 967b3f6c7e13e6ec2b3dded61e488ddf 348 Pfam PF00296 Luciferase-like monooxygenase 10 316 1.2E-66 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMIS_74670 bb88b0650a14d003d795caa36213557a 164 Pfam PF00293 NUDIX domain 12 136 4.3E-15 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMIS_74670 bb88b0650a14d003d795caa36213557a 164 Gene3D G3DSA:3.90.79.10 10 158 1.3E-29 T 14-10-2018 AMIS_74670 bb88b0650a14d003d795caa36213557a 164 ProSitePatterns PS00893 Nudix box signature. 44 65 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMIS_74670 bb88b0650a14d003d795caa36213557a 164 SUPERFAMILY SSF55811 9 153 1.76E-24 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMIS_4160 ab2483701e090a5c0336a22320d6e2f5 335 SUPERFAMILY SSF53756 15 332 9.03E-9 T 14-10-2018 AMIS_4160 ab2483701e090a5c0336a22320d6e2f5 335 Gene3D G3DSA:3.40.50.2000 142 280 3.8E-16 T 14-10-2018 AMIS_4160 ab2483701e090a5c0336a22320d6e2f5 335 Gene3D G3DSA:3.40.50.11190 1 141 2.5E-13 T 14-10-2018 AMIS_41740 a96c87ac501bcb248fb844b7def70f00 343 Gene3D G3DSA:3.40.50.720 1 319 4.2E-34 T 14-10-2018 AMIS_41740 a96c87ac501bcb248fb844b7def70f00 343 SUPERFAMILY SSF51735 1 297 2.04E-31 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_41740 a96c87ac501bcb248fb844b7def70f00 343 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 221 1.0E-4 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AMIS_1070 546b19c14dd407560aaafea5af193307 330 Pfam PF03747 ADP-ribosylglycohydrolase 6 310 4.3E-54 T 14-10-2018 IPR005502 ADP-ribosylation/Crystallin J1 AMIS_1070 546b19c14dd407560aaafea5af193307 330 Gene3D G3DSA:1.10.4080.10 1 328 8.1E-57 T 14-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily AMIS_1070 546b19c14dd407560aaafea5af193307 330 SUPERFAMILY SSF101478 5 326 1.44E-53 T 14-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily AMIS_52000 35461e331b35ed6fc5b3f344b34802e3 410 Gene3D G3DSA:2.160.10.10 291 409 5.4E-36 T 14-10-2018 AMIS_52000 35461e331b35ed6fc5b3f344b34802e3 410 Pfam PF00483 Nucleotidyl transferase 7 275 1.2E-66 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AMIS_52000 35461e331b35ed6fc5b3f344b34802e3 410 SUPERFAMILY SSF53448 4 379 2.48E-66 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_52000 35461e331b35ed6fc5b3f344b34802e3 410 SUPERFAMILY SSF51161 298 399 4.85E-18 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily AMIS_52000 35461e331b35ed6fc5b3f344b34802e3 410 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 96 104 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 AMIS_52000 35461e331b35ed6fc5b3f344b34802e3 410 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 195 205 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 AMIS_52000 35461e331b35ed6fc5b3f344b34802e3 410 Gene3D G3DSA:3.90.550.10 2 290 2.6E-78 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_52000 35461e331b35ed6fc5b3f344b34802e3 410 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 5 382 1.6E-135 T 14-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 AMIS_52000 35461e331b35ed6fc5b3f344b34802e3 410 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 2 408 46.094 T 14-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 AMIS_66780 5f68e41b7dccc64c6833b5784b8a6633 318 SUPERFAMILY SSF53300 83 275 2.37E-25 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMIS_66780 5f68e41b7dccc64c6833b5784b8a6633 318 SMART SM00327 80 283 1.3E-7 T 14-10-2018 IPR002035 von Willebrand factor, type A AMIS_66780 5f68e41b7dccc64c6833b5784b8a6633 318 Gene3D G3DSA:3.40.50.410 75 279 2.1E-40 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMIS_66780 5f68e41b7dccc64c6833b5784b8a6633 318 Pfam PF13519 von Willebrand factor type A domain 84 201 4.9E-15 T 14-10-2018 IPR002035 von Willebrand factor, type A AMIS_71190 da23506946fa41d38788b5f536884e29 525 SUPERFAMILY SSF55021 448 519 4.58E-15 T 14-10-2018 AMIS_71190 da23506946fa41d38788b5f536884e29 525 Gene3D G3DSA:3.40.50.720 6 304 4.2E-117 T 14-10-2018 AMIS_71190 da23506946fa41d38788b5f536884e29 525 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 312 1.5E-30 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 AMIS_71190 da23506946fa41d38788b5f536884e29 525 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 191 213 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AMIS_71190 da23506946fa41d38788b5f536884e29 525 SUPERFAMILY SSF51735 99 281 3.79E-59 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_71190 da23506946fa41d38788b5f536884e29 525 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 220 236 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AMIS_71190 da23506946fa41d38788b5f536884e29 525 Gene3D G3DSA:3.30.70.260 451 525 3.5E-25 T 14-10-2018 AMIS_71190 da23506946fa41d38788b5f536884e29 525 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 143 170 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AMIS_71190 da23506946fa41d38788b5f536884e29 525 Pfam PF01842 ACT domain 452 512 5.3E-10 T 14-10-2018 IPR002912 ACT domain AMIS_71190 da23506946fa41d38788b5f536884e29 525 Gene3D G3DSA:3.40.50.720 97 278 4.2E-117 T 14-10-2018 AMIS_71190 da23506946fa41d38788b5f536884e29 525 SUPERFAMILY SSF52283 3 134 5.48E-34 T 14-10-2018 AMIS_71190 da23506946fa41d38788b5f536884e29 525 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 106 280 1.8E-62 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AMIS_71190 da23506946fa41d38788b5f536884e29 525 TIGRFAM TIGR01327 PGDH: phosphoglycerate dehydrogenase 5 512 5.7E-175 T 14-10-2018 IPR006236 D-3-phosphoglycerate dehydrogenase GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|Reactome: R-HSA-977347 AMIS_71190 da23506946fa41d38788b5f536884e29 525 SUPERFAMILY SSF143548 320 446 3.4E-25 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 AMIS_71190 da23506946fa41d38788b5f536884e29 525 Gene3D G3DSA:3.30.1330.90 315 450 5.2E-36 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 AMIS_38900 fcab1bf9313d07df7c19d3d7634ac208 157 Gene3D G3DSA:3.10.20.30 1 73 8.8E-31 T 14-10-2018 IPR012675 Beta-grasp domain superfamily AMIS_38900 fcab1bf9313d07df7c19d3d7634ac208 157 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AMIS_38900 fcab1bf9313d07df7c19d3d7634ac208 157 Gene3D G3DSA:1.10.150.120 74 157 1.0E-29 T 14-10-2018 AMIS_38900 fcab1bf9313d07df7c19d3d7634ac208 157 SUPERFAMILY SSF47741 71 156 8.37E-27 T 14-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily AMIS_38900 fcab1bf9313d07df7c19d3d7634ac208 157 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 4 54 1.0E-7 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AMIS_38900 fcab1bf9313d07df7c19d3d7634ac208 157 SUPERFAMILY SSF54292 2 76 7.87E-26 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AMIS_38900 fcab1bf9313d07df7c19d3d7634ac208 157 Pfam PF01799 [2Fe-2S] binding domain 71 151 4.1E-27 T 14-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AMIS_59860 d54ff0666465ffe6ba2eb42f18ff335a 406 Gene3D G3DSA:3.30.390.10 3 399 1.2E-165 T 14-10-2018 IPR029017 Enolase-like, N-terminal AMIS_59860 d54ff0666465ffe6ba2eb42f18ff335a 406 Pfam PF13378 Enolase C-terminal domain-like 157 369 2.7E-47 T 14-10-2018 IPR029065 Enolase C-terminal domain-like AMIS_59860 d54ff0666465ffe6ba2eb42f18ff335a 406 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 32 120 1.5E-7 T 14-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AMIS_59860 d54ff0666465ffe6ba2eb42f18ff335a 406 Gene3D G3DSA:3.20.20.120 120 362 1.2E-165 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AMIS_59860 d54ff0666465ffe6ba2eb42f18ff335a 406 SUPERFAMILY SSF51604 120 378 2.49E-69 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AMIS_59860 d54ff0666465ffe6ba2eb42f18ff335a 406 SUPERFAMILY SSF54826 1 120 9.6E-22 T 14-10-2018 AMIS_59860 d54ff0666465ffe6ba2eb42f18ff335a 406 SMART SM00922 154 248 2.2E-17 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AMIS_24450 41546549ab9de49f920a844ee9fe29ca 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 1.5E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_24450 41546549ab9de49f920a844ee9fe29ca 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 1.5E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_24450 41546549ab9de49f920a844ee9fe29ca 205 Gene3D G3DSA:1.10.357.10 60 204 6.7E-17 T 14-10-2018 AMIS_24450 41546549ab9de49f920a844ee9fe29ca 205 SUPERFAMILY SSF46689 9 75 4.89E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_24450 41546549ab9de49f920a844ee9fe29ca 205 ProSitePatterns PS01081 TetR-type HTH domain signature. 34 65 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMIS_24450 41546549ab9de49f920a844ee9fe29ca 205 Gene3D G3DSA:1.10.10.60 10 59 1.3E-22 T 14-10-2018 AMIS_24450 41546549ab9de49f920a844ee9fe29ca 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 65 7.8E-15 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_74160 2034be7604d28a512a612fab323d0c3f 264 SUPERFAMILY SSF53474 8 264 1.14E-33 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_74160 2034be7604d28a512a612fab323d0c3f 264 Pfam PF12697 Alpha/beta hydrolase family 21 257 9.6E-16 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_74160 2034be7604d28a512a612fab323d0c3f 264 Gene3D G3DSA:3.40.50.1820 4 263 1.7E-42 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_62740 5ea4d1c1e202029f2c8f0154c9270359 327 Gene3D G3DSA:2.40.100.10 149 327 2.5E-31 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily AMIS_62740 5ea4d1c1e202029f2c8f0154c9270359 327 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 159 324 1.5E-22 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AMIS_62740 5ea4d1c1e202029f2c8f0154c9270359 327 SUPERFAMILY SSF50891 156 305 1.75E-26 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily AMIS_79480 7edc806d9f94422d78fb4b484638254a 422 Gene3D G3DSA:2.40.420.20 336 422 2.1E-9 T 14-10-2018 AMIS_26460 52118e3cd51b51a78829f5c5d5335311 334 Pfam PF00990 Diguanylate cyclase, GGDEF domain 184 330 1.0E-37 T 14-10-2018 IPR000160 GGDEF domain AMIS_26460 52118e3cd51b51a78829f5c5d5335311 334 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 181 330 4.7E-32 T 14-10-2018 IPR000160 GGDEF domain AMIS_26460 52118e3cd51b51a78829f5c5d5335311 334 SUPERFAMILY SSF55073 189 330 2.88E-38 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_26460 52118e3cd51b51a78829f5c5d5335311 334 Gene3D G3DSA:3.30.70.270 170 333 1.4E-48 T 14-10-2018 AMIS_26460 52118e3cd51b51a78829f5c5d5335311 334 SMART SM00267 173 334 3.1E-49 T 14-10-2018 IPR000160 GGDEF domain AMIS_32390 e0843dcf265085f95286cd09f1811a02 291 SUPERFAMILY SSF51735 5 252 1.21E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_32390 e0843dcf265085f95286cd09f1811a02 291 Gene3D G3DSA:3.40.50.720 3 269 5.9E-46 T 14-10-2018 AMIS_32390 e0843dcf265085f95286cd09f1811a02 291 Pfam PF00106 short chain dehydrogenase 8 208 4.1E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_32390 e0843dcf265085f95286cd09f1811a02 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 190 3.0E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_32390 e0843dcf265085f95286cd09f1811a02 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 162 3.0E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_32390 e0843dcf265085f95286cd09f1811a02 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 192 209 3.0E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_32390 e0843dcf265085f95286cd09f1811a02 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 94 105 3.0E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_32390 e0843dcf265085f95286cd09f1811a02 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 3.0E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_35740 5ac77ca281e52707879779567742e981 132 Pfam PF07498 Rho termination factor, N-terminal domain 94 125 9.5E-9 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 AMIS_35740 5ac77ca281e52707879779567742e981 132 Gene3D G3DSA:1.10.1740.70 2 62 6.1E-10 T 14-10-2018 AMIS_35740 5ac77ca281e52707879779567742e981 132 SUPERFAMILY SSF140376 5 62 1.83E-17 T 14-10-2018 IPR037205 ChaB superfamily AMIS_35740 5ac77ca281e52707879779567742e981 132 Gene3D G3DSA:1.10.720.10 87 125 3.2E-6 T 14-10-2018 AMIS_35740 5ac77ca281e52707879779567742e981 132 Pfam PF06150 ChaB 7 61 3.5E-20 T 14-10-2018 IPR009317 ChaB AMIS_69420 6f939ae6c2be1c706bb5e6e305c355a4 269 SUPERFAMILY SSF48264 52 237 8.53E-5 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_58730 4c092f9e38f9b2591a7de69566180f1f 667 Pfam PF02655 ATP-grasp domain 453 609 3.5E-13 T 14-10-2018 IPR003806 ATP-grasp fold, DUF201-type GO:0005524|GO:0046872 AMIS_58730 4c092f9e38f9b2591a7de69566180f1f 667 Gene3D G3DSA:3.30.1490.20 459 531 5.7E-6 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AMIS_58730 4c092f9e38f9b2591a7de69566180f1f 667 SUPERFAMILY SSF56059 453 633 5.22E-25 T 14-10-2018 AMIS_58730 4c092f9e38f9b2591a7de69566180f1f 667 Gene3D G3DSA:3.30.470.20 532 635 1.3E-21 T 14-10-2018 AMIS_58730 4c092f9e38f9b2591a7de69566180f1f 667 TIGRFAM TIGR04178 exo_archaeo: exosortase/archaeosortase family protein 97 180 4.8E-7 T 14-10-2018 IPR026392 Exosortase/Archaeosortase domain AMIS_58730 4c092f9e38f9b2591a7de69566180f1f 667 Gene3D G3DSA:3.40.50.20 347 458 9.3E-10 T 14-10-2018 AMIS_58730 4c092f9e38f9b2591a7de69566180f1f 667 SUPERFAMILY SSF51735 343 432 9.27E-7 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_73840 b51cf12d646803635baabcb9c1c81d36 257 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 132 160 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMIS_73840 b51cf12d646803635baabcb9c1c81d36 257 Pfam PF00106 short chain dehydrogenase 2 186 2.0E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_73840 b51cf12d646803635baabcb9c1c81d36 257 SUPERFAMILY SSF51735 2 249 2.84E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_73840 b51cf12d646803635baabcb9c1c81d36 257 Gene3D G3DSA:3.40.50.720 1 245 6.1E-55 T 14-10-2018 AMIS_73840 b51cf12d646803635baabcb9c1c81d36 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 3.9E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_73840 b51cf12d646803635baabcb9c1c81d36 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 3.9E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_73840 b51cf12d646803635baabcb9c1c81d36 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 3.9E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_73840 b51cf12d646803635baabcb9c1c81d36 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 3.9E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_30510 aad09094d6f7c9ba2a9b222eaf458bbc 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.4E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_30510 aad09094d6f7c9ba2a9b222eaf458bbc 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 113 129 1.4E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_30510 aad09094d6f7c9ba2a9b222eaf458bbc 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 177 1.4E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_30510 aad09094d6f7c9ba2a9b222eaf458bbc 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 69 80 1.4E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_30510 aad09094d6f7c9ba2a9b222eaf458bbc 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 158 1.4E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_30510 aad09094d6f7c9ba2a9b222eaf458bbc 235 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 119 127 4.1E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_30510 aad09094d6f7c9ba2a9b222eaf458bbc 235 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 158 4.1E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_30510 aad09094d6f7c9ba2a9b222eaf458bbc 235 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 69 80 4.1E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_30510 aad09094d6f7c9ba2a9b222eaf458bbc 235 SUPERFAMILY SSF51735 1 204 4.72E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_30510 aad09094d6f7c9ba2a9b222eaf458bbc 235 Gene3D G3DSA:3.40.50.720 1 230 1.2E-44 T 14-10-2018 AMIS_30510 aad09094d6f7c9ba2a9b222eaf458bbc 235 Pfam PF00106 short chain dehydrogenase 7 179 4.2E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_7740 994932d67c3daaad244fcaeedbb48b54 169 Gene3D G3DSA:3.40.630.30 8 156 1.1E-23 T 14-10-2018 AMIS_7740 994932d67c3daaad244fcaeedbb48b54 169 Pfam PF00583 Acetyltransferase (GNAT) family 73 154 2.1E-13 T 14-10-2018 IPR000182 GNAT domain AMIS_7740 994932d67c3daaad244fcaeedbb48b54 169 SUPERFAMILY SSF55729 13 156 2.96E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_39860 754a7226ac283ab12c4bdfa040b8c933 1097 SUPERFAMILY SSF49785 804 948 3.17E-10 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_39860 754a7226ac283ab12c4bdfa040b8c933 1097 Gene3D G3DSA:2.60.120.260 803 950 4.3E-31 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_39860 754a7226ac283ab12c4bdfa040b8c933 1097 Gene3D G3DSA:2.60.120.260 953 1097 2.0E-37 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_39860 754a7226ac283ab12c4bdfa040b8c933 1097 SUPERFAMILY SSF48208 275 747 9.64E-22 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AMIS_39860 754a7226ac283ab12c4bdfa040b8c933 1097 Gene3D G3DSA:1.50.10.10 291 585 7.9E-9 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 AMIS_63490 7b2f117344de96ab916fc9b57b478bbd 154 SUPERFAMILY SSF55961 3 138 2.06E-23 T 14-10-2018 AMIS_63490 7b2f117344de96ab916fc9b57b478bbd 154 Gene3D G3DSA:3.30.530.20 2 138 4.1E-34 T 14-10-2018 IPR023393 START-like domain superfamily AMIS_63490 7b2f117344de96ab916fc9b57b478bbd 154 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 127 2.6E-17 T 14-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 AMIS_79970 766d056df9e62e2b555174e74993d39f 509 SUPERFAMILY SSF56420 328 495 4.71E-36 T 14-10-2018 IPR036821 Peptide deformylase superfamily AMIS_79970 766d056df9e62e2b555174e74993d39f 509 Gene3D G3DSA:1.10.260.40 12 89 2.6E-9 T 14-10-2018 AMIS_79970 766d056df9e62e2b555174e74993d39f 509 SMART SM00530 16 71 1.2E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMIS_79970 766d056df9e62e2b555174e74993d39f 509 Pfam PF01327 Polypeptide deformylase 337 491 5.1E-31 T 14-10-2018 IPR023635 Peptide deformylase AMIS_79970 766d056df9e62e2b555174e74993d39f 509 SUPERFAMILY SSF47413 17 84 1.1E-9 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_79970 766d056df9e62e2b555174e74993d39f 509 Pfam PF13560 Helix-turn-helix domain 15 67 2.9E-8 T 14-10-2018 AMIS_79970 766d056df9e62e2b555174e74993d39f 509 Hamap MF_00163 Peptide deformylase [def]. 333 503 20.328 T 14-10-2018 IPR023635 Peptide deformylase AMIS_79970 766d056df9e62e2b555174e74993d39f 509 Gene3D G3DSA:3.90.45.10 324 503 2.2E-37 T 14-10-2018 IPR036821 Peptide deformylase superfamily AMIS_79970 766d056df9e62e2b555174e74993d39f 509 PRINTS PR01576 Peptide deformylase signature 373 402 6.3E-18 T 14-10-2018 IPR023635 Peptide deformylase AMIS_79970 766d056df9e62e2b555174e74993d39f 509 PRINTS PR01576 Peptide deformylase signature 430 441 6.3E-18 T 14-10-2018 IPR023635 Peptide deformylase AMIS_79970 766d056df9e62e2b555174e74993d39f 509 PRINTS PR01576 Peptide deformylase signature 442 460 6.3E-18 T 14-10-2018 IPR023635 Peptide deformylase AMIS_79970 766d056df9e62e2b555174e74993d39f 509 PRINTS PR01576 Peptide deformylase signature 461 490 6.3E-18 T 14-10-2018 IPR023635 Peptide deformylase AMIS_34540 4cfa638e552f419de07683c61f7c0171 124 SUPERFAMILY SSF54593 8 123 2.28E-30 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_34540 4cfa638e552f419de07683c61f7c0171 124 Gene3D G3DSA:3.10.180.10 8 124 5.1E-30 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_34540 4cfa638e552f419de07683c61f7c0171 124 Pfam PF12681 Glyoxalase-like domain 8 123 1.0E-16 T 14-10-2018 IPR025870 Glyoxalase-like domain AMIS_55950 2fb2b931e9528265d36b2213f1d2aa9e 239 Gene3D G3DSA:3.30.450.40 9 179 4.6E-23 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_55950 2fb2b931e9528265d36b2213f1d2aa9e 239 Pfam PF03861 ANTAR domain 180 232 2.7E-22 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 AMIS_55950 2fb2b931e9528265d36b2213f1d2aa9e 239 SUPERFAMILY SSF52172 162 232 4.47E-9 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_55950 2fb2b931e9528265d36b2213f1d2aa9e 239 PIRSF PIRSF036625 2 239 1.1E-49 T 14-10-2018 IPR012074 GAF-ANTAR transcription anti-termination regulator, putative AMIS_55950 2fb2b931e9528265d36b2213f1d2aa9e 239 SMART SM00065 28 175 3.3E-7 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_55950 2fb2b931e9528265d36b2213f1d2aa9e 239 SUPERFAMILY SSF55781 28 175 2.14E-20 T 14-10-2018 AMIS_55950 2fb2b931e9528265d36b2213f1d2aa9e 239 Pfam PF13185 GAF domain 27 165 2.6E-13 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_55950 2fb2b931e9528265d36b2213f1d2aa9e 239 Gene3D G3DSA:1.10.10.10 180 238 2.6E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_55950 2fb2b931e9528265d36b2213f1d2aa9e 239 SMART SM01012 177 232 3.1E-24 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 AMIS_45420 b57c666497cf950adefe3e92b34e138b 326 Gene3D G3DSA:3.40.50.720 1 318 6.8E-60 T 14-10-2018 AMIS_45420 b57c666497cf950adefe3e92b34e138b 326 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 214 9.9E-27 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AMIS_45420 b57c666497cf950adefe3e92b34e138b 326 SUPERFAMILY SSF51735 1 316 5.9E-59 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_79130 fcac0e80e72dfe0b552e497816799d0a 361 Pfam PF00248 Aldo/keto reductase family 52 345 1.9E-69 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain AMIS_79130 fcac0e80e72dfe0b552e497816799d0a 361 SUPERFAMILY SSF51430 37 347 3.8E-91 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMIS_79130 fcac0e80e72dfe0b552e497816799d0a 361 Gene3D G3DSA:3.20.20.100 39 361 7.6E-116 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMIS_10480 742d854a13fe9f7c3273ada5a35a964e 193 SUPERFAMILY SSF81301 9 141 4.45E-22 T 14-10-2018 AMIS_10480 742d854a13fe9f7c3273ada5a35a964e 193 Pfam PF14907 Uncharacterised nucleotidyltransferase 45 178 8.7E-9 T 14-10-2018 IPR039498 Uncharacterised nucleotidyltransferase AMIS_10480 742d854a13fe9f7c3273ada5a35a964e 193 Gene3D G3DSA:3.30.460.40 2 136 1.6E-10 T 14-10-2018 AMIS_4680 1a0cb879c5c4f4e2729387fc1c51e607 337 Pfam PF02653 Branched-chain amino acid transport system / permease component 56 326 2.4E-45 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 AMIS_4010 1e97f3557d2ee6938400d2a074e9661b 787 SUPERFAMILY SSF74650 4 270 6.91E-65 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 AMIS_4010 1e97f3557d2ee6938400d2a074e9661b 787 Pfam PF03632 Glycosyl hydrolase family 65 central catalytic domain 327 696 4.3E-138 T 14-10-2018 IPR005195 Glycoside hydrolase, family 65, central catalytic GO:0003824|GO:0005975 AMIS_4010 1e97f3557d2ee6938400d2a074e9661b 787 Pfam PF03633 Glycosyl hydrolase family 65, C-terminal domain 700 752 1.6E-13 T 14-10-2018 IPR005194 Glycoside hydrolase family 65, C-terminal AMIS_4010 1e97f3557d2ee6938400d2a074e9661b 787 SUPERFAMILY SSF48208 280 748 6.8E-124 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AMIS_4010 1e97f3557d2ee6938400d2a074e9661b 787 Gene3D G3DSA:1.50.10.10 321 681 1.2E-125 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 AMIS_4010 1e97f3557d2ee6938400d2a074e9661b 787 Gene3D G3DSA:2.70.98.40 4 271 1.7E-59 T 14-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily AMIS_4010 1e97f3557d2ee6938400d2a074e9661b 787 Pfam PF03636 Glycosyl hydrolase family 65, N-terminal domain 16 270 5.1E-59 T 14-10-2018 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 AMIS_4010 1e97f3557d2ee6938400d2a074e9661b 787 PIRSF PIRSF036289 1 766 6.9E-216 T 14-10-2018 IPR017045 Maltose phosphorylase/glycosyl hydrolase/vacuolar acid trehalase AMIS_4010 1e97f3557d2ee6938400d2a074e9661b 787 Gene3D G3DSA:2.60.420.10 682 755 4.5E-19 T 14-10-2018 AMIS_62560 f1b00ee762c45d1384a329f9894cf3f6 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 2.0E-33 T 14-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AMIS_62560 f1b00ee762c45d1384a329f9894cf3f6 100 Gene3D G3DSA:3.30.280.10 2 100 2.8E-45 T 14-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AMIS_62560 f1b00ee762c45d1384a329f9894cf3f6 100 Pfam PF00547 Urease, gamma subunit 3 99 2.1E-44 T 14-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AMIS_62560 f1b00ee762c45d1384a329f9894cf3f6 100 SUPERFAMILY SSF54111 2 99 2.09E-43 T 14-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AMIS_62560 f1b00ee762c45d1384a329f9894cf3f6 100 PIRSF PIRSF001223 1 100 9.8E-49 T 14-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AMIS_62560 f1b00ee762c45d1384a329f9894cf3f6 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 3 100 1.0E-45 T 14-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AMIS_62560 f1b00ee762c45d1384a329f9894cf3f6 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 33.122 T 14-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AMIS_50680 697234b81b2ff90a6d1273135e0d50a7 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.5E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_50680 697234b81b2ff90a6d1273135e0d50a7 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.5E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_50680 697234b81b2ff90a6d1273135e0d50a7 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.5E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_50680 697234b81b2ff90a6d1273135e0d50a7 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 1.5E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_50680 697234b81b2ff90a6d1273135e0d50a7 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 1.5E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_50680 697234b81b2ff90a6d1273135e0d50a7 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 1.5E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_50680 697234b81b2ff90a6d1273135e0d50a7 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 1.1E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_50680 697234b81b2ff90a6d1273135e0d50a7 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.1E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_50680 697234b81b2ff90a6d1273135e0d50a7 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 1.1E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_50680 697234b81b2ff90a6d1273135e0d50a7 260 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMIS_50680 697234b81b2ff90a6d1273135e0d50a7 260 Pfam PF00106 short chain dehydrogenase 6 199 3.7E-62 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_50680 697234b81b2ff90a6d1273135e0d50a7 260 Gene3D G3DSA:3.40.50.720 4 260 1.7E-82 T 14-10-2018 AMIS_50680 697234b81b2ff90a6d1273135e0d50a7 260 SUPERFAMILY SSF51735 4 257 1.53E-77 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_57090 ee55811af71cc04cbc98991421cff574 323 SUPERFAMILY SSF55298 199 321 1.29E-17 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AMIS_57090 ee55811af71cc04cbc98991421cff574 323 SUPERFAMILY SSF55298 94 195 3.7E-9 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AMIS_57090 ee55811af71cc04cbc98991421cff574 323 Gene3D G3DSA:3.30.1330.40 203 323 6.0E-20 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AMIS_57090 ee55811af71cc04cbc98991421cff574 323 Gene3D G3DSA:3.30.1330.40 63 196 1.2E-9 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AMIS_57090 ee55811af71cc04cbc98991421cff574 323 Pfam PF01042 Endoribonuclease L-PSP 211 317 5.1E-9 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 AMIS_65200 90231e08e410934d41a6a0bc3ef0b15d 312 SMART SM00829 10 305 9.1E-15 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMIS_65200 90231e08e410934d41a6a0bc3ef0b15d 312 Gene3D G3DSA:3.40.50.720 128 256 1.7E-71 T 14-10-2018 AMIS_65200 90231e08e410934d41a6a0bc3ef0b15d 312 Pfam PF13602 Zinc-binding dehydrogenase 188 305 3.6E-13 T 14-10-2018 AMIS_65200 90231e08e410934d41a6a0bc3ef0b15d 312 SUPERFAMILY SSF51735 117 275 1.54E-25 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_65200 90231e08e410934d41a6a0bc3ef0b15d 312 Gene3D G3DSA:3.90.180.10 8 304 1.7E-71 T 14-10-2018 AMIS_65200 90231e08e410934d41a6a0bc3ef0b15d 312 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 89 1.2E-5 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMIS_65200 90231e08e410934d41a6a0bc3ef0b15d 312 SUPERFAMILY SSF50129 1 150 3.8E-35 T 14-10-2018 IPR011032 GroES-like superfamily AMIS_58310 17b3be35c4ab9e75902abd3df061f2a5 682 SUPERFAMILY SSF53187 379 675 1.1E-49 T 14-10-2018 AMIS_58310 17b3be35c4ab9e75902abd3df061f2a5 682 SMART SM00631 230 646 4.7E-22 T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 AMIS_58310 17b3be35c4ab9e75902abd3df061f2a5 682 Gene3D G3DSA:3.40.630.10 340 681 3.2E-57 T 14-10-2018 AMIS_58310 17b3be35c4ab9e75902abd3df061f2a5 682 Pfam PF00246 Zinc carboxypeptidase 379 663 7.1E-38 T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 AMIS_54340 b0ef20f2ed44563864dbf94ed9c7ecc6 269 SUPERFAMILY SSF52402 137 246 2.18E-15 T 14-10-2018 AMIS_54340 b0ef20f2ed44563864dbf94ed9c7ecc6 269 Gene3D G3DSA:3.40.50.12370 2 245 5.3E-44 T 14-10-2018 AMIS_54340 b0ef20f2ed44563864dbf94ed9c7ecc6 269 Pfam PF00582 Universal stress protein family 3 128 8.7E-11 T 14-10-2018 IPR006016 UspA AMIS_54340 b0ef20f2ed44563864dbf94ed9c7ecc6 269 Pfam PF00582 Universal stress protein family 138 173 5.8E-5 T 14-10-2018 IPR006016 UspA AMIS_54340 b0ef20f2ed44563864dbf94ed9c7ecc6 269 SUPERFAMILY SSF52402 3 133 5.02E-17 T 14-10-2018 AMIS_9780 bf0222292243b23af857f6c664728ff8 413 Gene3D G3DSA:2.60.40.3710 169 410 1.1E-92 T 14-10-2018 AMIS_9780 bf0222292243b23af857f6c664728ff8 413 Gene3D G3DSA:2.60.40.3780 62 158 1.2E-13 T 14-10-2018 AMIS_9780 bf0222292243b23af857f6c664728ff8 413 Gene3D G3DSA:2.40.440.10 262 398 1.1E-92 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like AMIS_9780 bf0222292243b23af857f6c664728ff8 413 SUPERFAMILY SSF141523 263 384 2.49E-28 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like AMIS_9780 bf0222292243b23af857f6c664728ff8 413 Pfam PF03734 L,D-transpeptidase catalytic domain 266 384 7.3E-15 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 AMIS_25670 3d4871764da1ccea6eed39a1e857fce7 112 Pfam PF13411 MerR HTH family regulatory protein 22 85 4.9E-12 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_25670 3d4871764da1ccea6eed39a1e857fce7 112 SUPERFAMILY SSF46955 22 93 8.7E-13 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily AMIS_25670 3d4871764da1ccea6eed39a1e857fce7 112 SMART SM00422 22 90 2.8E-10 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_25670 3d4871764da1ccea6eed39a1e857fce7 112 Gene3D G3DSA:1.10.1660.10 14 90 4.1E-15 T 14-10-2018 AMIS_57660 d1f2b0d65a184d2b88e4d2c391ff65d9 281 Gene3D G3DSA:1.10.3720.10 2 268 4.2E-52 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_57660 d1f2b0d65a184d2b88e4d2c391ff65d9 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 264 1.4E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_57660 d1f2b0d65a184d2b88e4d2c391ff65d9 281 SUPERFAMILY SSF161098 3 280 2.22E-54 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_49650 3a0fefb8d68cec0fee403dd7b105e719 1736 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1159 1560 1.4E-118 T 14-10-2018 IPR010071 Amino acid adenylation domain AMIS_49650 3a0fefb8d68cec0fee403dd7b105e719 1736 Gene3D G3DSA:3.30.300.30 1532 1627 6.4E-28 T 14-10-2018 AMIS_49650 3a0fefb8d68cec0fee403dd7b105e719 1736 Gene3D G3DSA:1.10.1200.10 1628 1711 1.5E-21 T 14-10-2018 IPR036736 ACP-like superfamily AMIS_49650 3a0fefb8d68cec0fee403dd7b105e719 1736 Gene3D G3DSA:3.30.559.30 843 1103 9.2E-112 T 14-10-2018 AMIS_49650 3a0fefb8d68cec0fee403dd7b105e719 1736 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1665 1680 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site AMIS_49650 3a0fefb8d68cec0fee403dd7b105e719 1736 SUPERFAMILY SSF47336 1638 1730 1.31E-17 T 14-10-2018 IPR036736 ACP-like superfamily AMIS_49650 3a0fefb8d68cec0fee403dd7b105e719 1736 Pfam PF00550 Phosphopantetheine attachment site 1643 1706 6.3E-16 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain AMIS_49650 3a0fefb8d68cec0fee403dd7b105e719 1736 Pfam PF00550 Phosphopantetheine attachment site 582 642 2.6E-7 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain AMIS_49650 3a0fefb8d68cec0fee403dd7b105e719 1736 SUPERFAMILY SSF52777 665 839 1.89E-34 T 14-10-2018 AMIS_49650 3a0fefb8d68cec0fee403dd7b105e719 1736 Pfam PF00668 Condensation domain 663 1118 3.5E-74 T 14-10-2018 IPR001242 Condensation domain AMIS_49650 3a0fefb8d68cec0fee403dd7b105e719 1736 SUPERFAMILY SSF47336 576 670 7.46E-12 T 14-10-2018 IPR036736 ACP-like superfamily AMIS_49650 3a0fefb8d68cec0fee403dd7b105e719 1736 Gene3D G3DSA:3.40.50.12780 13 440 4.8E-142 T 14-10-2018 AMIS_49650 3a0fefb8d68cec0fee403dd7b105e719 1736 Gene3D G3DSA:3.40.50.12780 1124 1531 1.2E-126 T 14-10-2018 AMIS_49650 3a0fefb8d68cec0fee403dd7b105e719 1736 Gene3D G3DSA:3.30.559.10 664 1048 9.2E-112 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AMIS_49650 3a0fefb8d68cec0fee403dd7b105e719 1736 Pfam PF00501 AMP-binding enzyme 1138 1537 3.7E-88 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMIS_49650 3a0fefb8d68cec0fee403dd7b105e719 1736 Pfam PF00501 AMP-binding enzyme 19 448 1.2E-73 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMIS_49650 3a0fefb8d68cec0fee403dd7b105e719 1736 Pfam PF13193 AMP-binding enzyme C-terminal domain 1546 1615 1.0E-9 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AMIS_49650 3a0fefb8d68cec0fee403dd7b105e719 1736 SUPERFAMILY SSF56801 18 550 2.35E-101 T 14-10-2018 AMIS_49650 3a0fefb8d68cec0fee403dd7b105e719 1736 SUPERFAMILY SSF56801 1098 1624 5.49E-139 T 14-10-2018 AMIS_49650 3a0fefb8d68cec0fee403dd7b105e719 1736 Gene3D G3DSA:1.10.1200.10 575 659 1.2E-7 T 14-10-2018 IPR036736 ACP-like superfamily AMIS_49650 3a0fefb8d68cec0fee403dd7b105e719 1736 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1281 1292 - T 14-10-2018 IPR020845 AMP-binding, conserved site AMIS_49650 3a0fefb8d68cec0fee403dd7b105e719 1736 Gene3D G3DSA:3.30.300.30 442 561 2.9E-32 T 14-10-2018 AMIS_49650 3a0fefb8d68cec0fee403dd7b105e719 1736 SMART SM00823 Phosphopantetheine attachment site 1641 1710 1.7E-7 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AMIS_49650 3a0fefb8d68cec0fee403dd7b105e719 1736 SMART SM00823 Phosphopantetheine attachment site 576 648 1.2E-4 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AMIS_49650 3a0fefb8d68cec0fee403dd7b105e719 1736 SUPERFAMILY SSF52777 850 1122 3.56E-51 T 14-10-2018 AMIS_35250 e60dfe6604e1b53674a42e390f4aade0 195 SUPERFAMILY SSF48498 81 192 1.88E-11 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_35250 e60dfe6604e1b53674a42e390f4aade0 195 Gene3D G3DSA:1.10.357.10 1 192 4.5E-42 T 14-10-2018 AMIS_35250 e60dfe6604e1b53674a42e390f4aade0 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 52 5.2E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_35250 e60dfe6604e1b53674a42e390f4aade0 195 SUPERFAMILY SSF46689 5 76 4.24E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_14560 de90a0ef5494f8c43ac631ed5034c3e9 786 SUPERFAMILY SSF46785 414 472 5.12E-6 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_14560 de90a0ef5494f8c43ac631ed5034c3e9 786 ProSitePatterns PS01125 ROK family signature. 206 233 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AMIS_14560 de90a0ef5494f8c43ac631ed5034c3e9 786 Gene3D G3DSA:3.30.420.40 490 781 2.4E-61 T 14-10-2018 AMIS_14560 de90a0ef5494f8c43ac631ed5034c3e9 786 SUPERFAMILY SSF53067 479 784 1.4E-39 T 14-10-2018 AMIS_14560 de90a0ef5494f8c43ac631ed5034c3e9 786 Gene3D G3DSA:3.30.420.40 88 363 1.5E-59 T 14-10-2018 AMIS_14560 de90a0ef5494f8c43ac631ed5034c3e9 786 Gene3D G3DSA:1.10.10.10 399 473 2.7E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_14560 de90a0ef5494f8c43ac631ed5034c3e9 786 Gene3D G3DSA:1.10.10.10 5 76 1.1E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_14560 de90a0ef5494f8c43ac631ed5034c3e9 786 Gene3D G3DSA:3.30.420.40 600 772 2.4E-61 T 14-10-2018 AMIS_14560 de90a0ef5494f8c43ac631ed5034c3e9 786 Gene3D G3DSA:3.30.420.40 196 354 1.5E-59 T 14-10-2018 AMIS_14560 de90a0ef5494f8c43ac631ed5034c3e9 786 Pfam PF00480 ROK family 490 784 1.0E-36 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AMIS_14560 de90a0ef5494f8c43ac631ed5034c3e9 786 Pfam PF00480 ROK family 85 368 1.2E-40 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AMIS_14560 de90a0ef5494f8c43ac631ed5034c3e9 786 SUPERFAMILY SSF53067 84 369 1.41E-38 T 14-10-2018 AMIS_14560 de90a0ef5494f8c43ac631ed5034c3e9 786 SUPERFAMILY SSF46785 13 71 1.96E-8 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_58410 509f5d42e8dbefc99b9913ba821b9068 199 ProSitePatterns PS00893 Nudix box signature. 95 116 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMIS_58410 509f5d42e8dbefc99b9913ba821b9068 199 Pfam PF00293 NUDIX domain 66 183 3.2E-18 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMIS_58410 509f5d42e8dbefc99b9913ba821b9068 199 SUPERFAMILY SSF55811 45 181 7.99E-26 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMIS_58410 509f5d42e8dbefc99b9913ba821b9068 199 Gene3D G3DSA:3.90.79.10 18 199 2.2E-34 T 14-10-2018 AMIS_64930 3a09395a60165ac2331656eeb6361619 685 Gene3D G3DSA:1.10.287.130 303 375 3.1E-12 T 14-10-2018 AMIS_64930 3a09395a60165ac2331656eeb6361619 685 Pfam PF08448 PAS fold 186 292 1.8E-15 T 14-10-2018 IPR013656 PAS fold-4 AMIS_64930 3a09395a60165ac2331656eeb6361619 685 Gene3D G3DSA:3.40.50.2300 555 674 1.1E-24 T 14-10-2018 AMIS_64930 3a09395a60165ac2331656eeb6361619 685 Pfam PF00072 Response regulator receiver domain 557 667 4.5E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_64930 3a09395a60165ac2331656eeb6361619 685 SUPERFAMILY SSF55874 368 536 1.07E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_64930 3a09395a60165ac2331656eeb6361619 685 SMART SM00388 311 377 7.8E-6 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_64930 3a09395a60165ac2331656eeb6361619 685 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 177 297 3.6E-16 T 14-10-2018 IPR000014 PAS domain AMIS_64930 3a09395a60165ac2331656eeb6361619 685 SMART SM00448 555 667 3.1E-17 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_64930 3a09395a60165ac2331656eeb6361619 685 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 421 536 4.8E-13 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_64930 3a09395a60165ac2331656eeb6361619 685 SUPERFAMILY SSF55781 29 179 1.44E-8 T 14-10-2018 AMIS_64930 3a09395a60165ac2331656eeb6361619 685 SMART SM00086 251 293 2.2E-5 T 14-10-2018 IPR001610 PAC motif AMIS_64930 3a09395a60165ac2331656eeb6361619 685 SUPERFAMILY SSF47384 306 377 1.51E-7 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_64930 3a09395a60165ac2331656eeb6361619 685 SMART SM00387 418 538 1.2E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_64930 3a09395a60165ac2331656eeb6361619 685 SUPERFAMILY SSF55785 170 291 7.25E-23 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_64930 3a09395a60165ac2331656eeb6361619 685 Gene3D G3DSA:3.30.565.10 379 544 7.9E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_64930 3a09395a60165ac2331656eeb6361619 685 Gene3D G3DSA:3.30.450.40 28 174 3.7E-8 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_64930 3a09395a60165ac2331656eeb6361619 685 Gene3D G3DSA:3.30.450.20 175 291 6.0E-20 T 14-10-2018 AMIS_64930 3a09395a60165ac2331656eeb6361619 685 SMART SM00091 180 246 4.0E-6 T 14-10-2018 IPR000014 PAS domain AMIS_64930 3a09395a60165ac2331656eeb6361619 685 PRINTS PR00344 Bacterial sensor protein C-terminal signature 469 483 3.1E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_64930 3a09395a60165ac2331656eeb6361619 685 PRINTS PR00344 Bacterial sensor protein C-terminal signature 498 516 3.1E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_64930 3a09395a60165ac2331656eeb6361619 685 PRINTS PR00344 Bacterial sensor protein C-terminal signature 522 535 3.1E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_64930 3a09395a60165ac2331656eeb6361619 685 PRINTS PR00344 Bacterial sensor protein C-terminal signature 487 497 3.1E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_64930 3a09395a60165ac2331656eeb6361619 685 SUPERFAMILY SSF52172 556 678 1.57E-25 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_41680 3d2968d132985c1a4e408ab733215cbe 139 Gene3D G3DSA:3.30.300.20 46 138 3.8E-32 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta AMIS_41680 3d2968d132985c1a4e408ab733215cbe 139 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 4 137 1.1E-52 T 14-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 AMIS_41680 3d2968d132985c1a4e408ab733215cbe 139 Pfam PF02566 OsmC-like protein 42 136 4.2E-19 T 14-10-2018 IPR003718 OsmC/Ohr family AMIS_41680 3d2968d132985c1a4e408ab733215cbe 139 Gene3D G3DSA:2.20.25.10 1 45 6.9E-21 T 14-10-2018 AMIS_41680 3d2968d132985c1a4e408ab733215cbe 139 SUPERFAMILY SSF82784 1 138 2.09E-41 T 14-10-2018 IPR036102 OsmC/Ohr superfamily AMIS_12050 ba9ac9b73a7e88b403391d4c83741381 261 SMART SM00382 29 218 7.4E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_12050 ba9ac9b73a7e88b403391d4c83741381 261 Pfam PF00005 ABC transporter 20 168 2.8E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_12050 ba9ac9b73a7e88b403391d4c83741381 261 SUPERFAMILY SSF52540 4 229 4.69E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_12050 ba9ac9b73a7e88b403391d4c83741381 261 Gene3D G3DSA:3.40.50.300 1 232 3.0E-60 T 14-10-2018 AMIS_7710 075c848a07a192c92db2e65e255fd996 451 Gene3D G3DSA:3.50.50.100 2 411 3.7E-105 T 14-10-2018 AMIS_7710 075c848a07a192c92db2e65e255fd996 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 103 121 5.5E-12 T 14-10-2018 AMIS_7710 075c848a07a192c92db2e65e255fd996 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 163 181 5.5E-12 T 14-10-2018 AMIS_7710 075c848a07a192c92db2e65e255fd996 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 5.5E-12 T 14-10-2018 AMIS_7710 075c848a07a192c92db2e65e255fd996 451 SUPERFAMILY SSF51905 4 343 3.94E-27 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_7710 075c848a07a192c92db2e65e255fd996 451 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 335 4.2E-40 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMIS_26540 fded1eaa74e0a825d7c57a2b5aea0693 754 Gene3D G3DSA:1.20.1640.10 145 345 2.6E-5 T 14-10-2018 AMIS_26540 fded1eaa74e0a825d7c57a2b5aea0693 754 SUPERFAMILY SSF82866 124 343 1.7E-26 T 14-10-2018 AMIS_26540 fded1eaa74e0a825d7c57a2b5aea0693 754 Gene3D G3DSA:1.20.1640.10 511 707 2.9E-6 T 14-10-2018 AMIS_26540 fded1eaa74e0a825d7c57a2b5aea0693 754 SUPERFAMILY SSF82866 486 710 3.14E-29 T 14-10-2018 AMIS_26540 fded1eaa74e0a825d7c57a2b5aea0693 754 Pfam PF03176 MMPL family 78 374 4.6E-41 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 AMIS_26540 fded1eaa74e0a825d7c57a2b5aea0693 754 Pfam PF03176 MMPL family 405 711 5.5E-33 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 AMIS_33300 9ef483601a8ed6bac5c2972684e55eca 216 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 33 193 7.1E-38 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AMIS_33300 9ef483601a8ed6bac5c2972684e55eca 216 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 76 126 6.0E-7 T 14-10-2018 AMIS_33300 9ef483601a8ed6bac5c2972684e55eca 216 SUPERFAMILY SSF55681 3 188 4.39E-46 T 14-10-2018 AMIS_33300 9ef483601a8ed6bac5c2972684e55eca 216 Hamap MF_00013 Octanoyltransferase [lipB]. 3 216 29.619 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AMIS_33300 9ef483601a8ed6bac5c2972684e55eca 216 Pfam PF03099 Biotin/lipoate A/B protein ligase family 68 164 4.7E-6 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 AMIS_33300 9ef483601a8ed6bac5c2972684e55eca 216 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 71 86 - T 14-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 AMIS_33300 9ef483601a8ed6bac5c2972684e55eca 216 Gene3D G3DSA:3.30.930.10 2 213 5.2E-56 T 14-10-2018 AMIS_33300 9ef483601a8ed6bac5c2972684e55eca 216 PIRSF PIRSF016262 1 215 6.8E-49 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AMIS_5270 fa360e77e748bc092b72245a644a7c0c 241 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 236 6.9E-42 T 14-10-2018 AMIS_5270 fa360e77e748bc092b72245a644a7c0c 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 2.0E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_5270 fa360e77e748bc092b72245a644a7c0c 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 2.0E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_5270 fa360e77e748bc092b72245a644a7c0c 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 221 2.0E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_5270 fa360e77e748bc092b72245a644a7c0c 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.0E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_5270 fa360e77e748bc092b72245a644a7c0c 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 2.0E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_5270 fa360e77e748bc092b72245a644a7c0c 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 2.0E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_5270 fa360e77e748bc092b72245a644a7c0c 241 Gene3D G3DSA:3.40.50.720 2 239 1.0E-61 T 14-10-2018 AMIS_5270 fa360e77e748bc092b72245a644a7c0c 241 SUPERFAMILY SSF51735 3 238 1.94E-60 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_5270 fa360e77e748bc092b72245a644a7c0c 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 1.6E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_5270 fa360e77e748bc092b72245a644a7c0c 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 1.6E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_5270 fa360e77e748bc092b72245a644a7c0c 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 1.6E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_5270 fa360e77e748bc092b72245a644a7c0c 241 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 181 0.0028 T 14-10-2018 AMIS_45490 289e67247e57e4b7d9ce715386557d44 272 Gene3D G3DSA:3.20.20.150 3 272 1.7E-56 T 14-10-2018 AMIS_45490 289e67247e57e4b7d9ce715386557d44 272 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 31 38 - T 14-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 AMIS_45490 289e67247e57e4b7d9ce715386557d44 272 SUPERFAMILY SSF51658 1 269 9.17E-51 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily AMIS_45490 289e67247e57e4b7d9ce715386557d44 272 Pfam PF01261 Xylose isomerase-like TIM barrel 20 227 2.7E-27 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AMIS_46770 43a8d5bfbcf6f2b91ba0750df12410ab 237 Gene3D G3DSA:3.10.50.40 128 236 3.8E-30 T 14-10-2018 AMIS_46770 43a8d5bfbcf6f2b91ba0750df12410ab 237 SUPERFAMILY SSF54534 133 233 1.47E-27 T 14-10-2018 AMIS_46770 43a8d5bfbcf6f2b91ba0750df12410ab 237 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 147 232 2.9E-22 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AMIS_37590 a618365ba2136b8bbf7e12b9def4c8c0 445 Gene3D G3DSA:3.90.1150.10 14 435 1.9E-137 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMIS_37590 a618365ba2136b8bbf7e12b9def4c8c0 445 SUPERFAMILY SSF53383 6 437 5.54E-117 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_37590 a618365ba2136b8bbf7e12b9def4c8c0 445 Pfam PF00202 Aminotransferase class-III 28 436 2.7E-93 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMIS_37590 a618365ba2136b8bbf7e12b9def4c8c0 445 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 242 279 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMIS_37590 a618365ba2136b8bbf7e12b9def4c8c0 445 Gene3D G3DSA:3.40.640.10 62 327 1.9E-137 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_6320 91d0079386a2a15472b709166d125790 340 SUPERFAMILY SSF47789 247 319 5.49E-23 T 14-10-2018 AMIS_6320 91d0079386a2a15472b709166d125790 340 SUPERFAMILY SSF55257 8 220 1.65E-24 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMIS_6320 91d0079386a2a15472b709166d125790 340 Gene3D G3DSA:3.30.1360.10 13 217 9.4E-81 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMIS_6320 91d0079386a2a15472b709166d125790 340 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 24 218 1.4E-18 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMIS_6320 91d0079386a2a15472b709166d125790 340 SUPERFAMILY SSF56553 48 169 1.44E-40 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMIS_6320 91d0079386a2a15472b709166d125790 340 Gene3D G3DSA:2.170.120.12 48 168 9.4E-81 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMIS_6320 91d0079386a2a15472b709166d125790 340 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 57 150 4.2E-23 T 14-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMIS_6320 91d0079386a2a15472b709166d125790 340 Gene3D G3DSA:1.10.150.20 226 326 7.7E-28 T 14-10-2018 AMIS_6320 91d0079386a2a15472b709166d125790 340 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 3 311 33.877 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMIS_6320 91d0079386a2a15472b709166d125790 340 SMART SM00662 18 225 3.3E-88 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMIS_6320 91d0079386a2a15472b709166d125790 340 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 250 322 2.0E-27 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMIS_6320 91d0079386a2a15472b709166d125790 340 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 19 310 1.4E-110 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMIS_6320 91d0079386a2a15472b709166d125790 340 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 244 302 3.0E-25 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMIS_5380 7690d16f5eb0c0b936bf5f8133347508 219 Gene3D G3DSA:1.10.357.10 8 207 4.6E-49 T 14-10-2018 AMIS_5380 7690d16f5eb0c0b936bf5f8133347508 219 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 71 1.9E-17 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_5380 7690d16f5eb0c0b936bf5f8133347508 219 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 25 38 4.9E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_5380 7690d16f5eb0c0b936bf5f8133347508 219 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 46 69 4.9E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_5380 7690d16f5eb0c0b936bf5f8133347508 219 SUPERFAMILY SSF48498 91 203 9.34E-26 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_5380 7690d16f5eb0c0b936bf5f8133347508 219 SUPERFAMILY SSF46689 11 95 1.84E-21 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_42550 c0826538d265636c86b4d3f858930aef 184 Pfam PF11706 CGNR zinc finger 138 180 3.2E-17 T 14-10-2018 IPR021005 Zinc finger, CGNR AMIS_42550 c0826538d265636c86b4d3f858930aef 184 SUPERFAMILY SSF160904 2 179 1.83E-45 T 14-10-2018 AMIS_42550 c0826538d265636c86b4d3f858930aef 184 Gene3D G3DSA:1.10.3300.10 3 181 1.8E-47 T 14-10-2018 IPR023286 ABATE domain superfamily AMIS_42550 c0826538d265636c86b4d3f858930aef 184 Pfam PF07336 Putative stress-induced transcription regulator 14 133 1.2E-13 T 14-10-2018 IPR010852 Putative stress-induced transcription regulator AMIS_72740 69ada7a99dff0b5f6e5cfc11f31f27be 237 SUPERFAMILY SSF52172 11 187 4.98E-42 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_72740 69ada7a99dff0b5f6e5cfc11f31f27be 237 SMART SM00448 12 123 1.9E-43 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_72740 69ada7a99dff0b5f6e5cfc11f31f27be 237 Gene3D G3DSA:3.40.50.2300 1 138 5.2E-39 T 14-10-2018 AMIS_72740 69ada7a99dff0b5f6e5cfc11f31f27be 237 Pfam PF00072 Response regulator receiver domain 15 124 3.4E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_72740 69ada7a99dff0b5f6e5cfc11f31f27be 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 159 232 6.1E-27 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_72740 69ada7a99dff0b5f6e5cfc11f31f27be 237 SMART SM00862 158 232 7.2E-28 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_72740 69ada7a99dff0b5f6e5cfc11f31f27be 237 Gene3D G3DSA:1.10.10.10 139 237 1.8E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_32820 0ad138af8d255b4e7ea151f12409fa17 275 SUPERFAMILY SSF51735 3 249 1.14E-63 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_32820 0ad138af8d255b4e7ea151f12409fa17 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 3.2E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_32820 0ad138af8d255b4e7ea151f12409fa17 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 3.2E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_32820 0ad138af8d255b4e7ea151f12409fa17 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 3.2E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_32820 0ad138af8d255b4e7ea151f12409fa17 275 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMIS_32820 0ad138af8d255b4e7ea151f12409fa17 275 Gene3D G3DSA:3.40.50.720 5 262 2.5E-61 T 14-10-2018 AMIS_32820 0ad138af8d255b4e7ea151f12409fa17 275 Pfam PF00106 short chain dehydrogenase 9 193 5.0E-49 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_32820 0ad138af8d255b4e7ea151f12409fa17 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.2E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_32820 0ad138af8d255b4e7ea151f12409fa17 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 1.2E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_32820 0ad138af8d255b4e7ea151f12409fa17 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.2E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_32820 0ad138af8d255b4e7ea151f12409fa17 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 1.2E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_32820 0ad138af8d255b4e7ea151f12409fa17 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 1.2E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_37070 2ebc23f0032b13b69df434cc3c5e7b27 176 Pfam PF01047 MarR family 60 113 1.4E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_37070 2ebc23f0032b13b69df434cc3c5e7b27 176 PRINTS PR00598 Bacterial regulatory protein MarR family signature 108 124 6.5E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_37070 2ebc23f0032b13b69df434cc3c5e7b27 176 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 104 6.5E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_37070 2ebc23f0032b13b69df434cc3c5e7b27 176 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 88 6.5E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_37070 2ebc23f0032b13b69df434cc3c5e7b27 176 SUPERFAMILY SSF46785 27 159 1.95E-29 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_37070 2ebc23f0032b13b69df434cc3c5e7b27 176 SMART SM00347 48 148 3.8E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_37070 2ebc23f0032b13b69df434cc3c5e7b27 176 Gene3D G3DSA:1.10.10.10 8 162 9.9E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_40450 aa526da7b64213b03008b4f7db916e78 410 Pfam PF12802 MarR family 12 58 5.6E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_40450 aa526da7b64213b03008b4f7db916e78 410 Gene3D G3DSA:3.30.420.40 71 189 4.5E-6 T 14-10-2018 AMIS_40450 aa526da7b64213b03008b4f7db916e78 410 SUPERFAMILY SSF53067 77 406 1.42E-35 T 14-10-2018 AMIS_40450 aa526da7b64213b03008b4f7db916e78 410 Gene3D G3DSA:1.10.10.10 1 70 3.7E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_40450 aa526da7b64213b03008b4f7db916e78 410 SUPERFAMILY SSF46785 5 64 3.03E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_40450 aa526da7b64213b03008b4f7db916e78 410 Pfam PF00480 ROK family 154 405 6.0E-26 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AMIS_19450 c929fed79e5dcd36becd782ad1ab1910 517 Gene3D G3DSA:3.30.300.30 407 513 9.9E-25 T 14-10-2018 AMIS_19450 c929fed79e5dcd36becd782ad1ab1910 517 Pfam PF00501 AMP-binding enzyme 10 411 5.3E-63 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMIS_19450 c929fed79e5dcd36becd782ad1ab1910 517 Gene3D G3DSA:3.40.50.12780 1 405 1.0E-82 T 14-10-2018 AMIS_19450 c929fed79e5dcd36becd782ad1ab1910 517 SUPERFAMILY SSF56801 4 508 3.79E-113 T 14-10-2018 AMIS_19450 c929fed79e5dcd36becd782ad1ab1910 517 ProSitePatterns PS00455 Putative AMP-binding domain signature. 150 161 - T 14-10-2018 IPR020845 AMP-binding, conserved site AMIS_19450 c929fed79e5dcd36becd782ad1ab1910 517 Pfam PF13193 AMP-binding enzyme C-terminal domain 421 496 2.8E-18 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AMIS_70110 d86d32394dc603a283d315e17cde6eeb 523 Gene3D G3DSA:3.30.230.10 15 170 7.5E-16 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMIS_70110 d86d32394dc603a283d315e17cde6eeb 523 SMART SM00382 210 376 8.7E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_70110 d86d32394dc603a283d315e17cde6eeb 523 Gene3D G3DSA:3.40.50.300 191 445 8.4E-40 T 14-10-2018 AMIS_70110 d86d32394dc603a283d315e17cde6eeb 523 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 405 501 5.4E-26 T 14-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain AMIS_70110 d86d32394dc603a283d315e17cde6eeb 523 Pfam PF01078 Magnesium chelatase, subunit ChlI 190 394 3.5E-83 T 14-10-2018 IPR000523 Magnesium chelatase ChlI domain AMIS_70110 d86d32394dc603a283d315e17cde6eeb 523 SUPERFAMILY SSF54211 9 169 1.59E-38 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMIS_70110 d86d32394dc603a283d315e17cde6eeb 523 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 143 1.9E-39 T 14-10-2018 AMIS_70110 d86d32394dc603a283d315e17cde6eeb 523 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 9 501 2.0E-147 T 14-10-2018 IPR004482 Mg chelatase-related protein AMIS_70110 d86d32394dc603a283d315e17cde6eeb 523 SUPERFAMILY SSF52540 187 515 6.75E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_67190 6b557def8d36f2d3e2ffdce575937862 296 PRINTS PR00377 Inositol monophosphatase superfamily signature 49 69 3.7E-6 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMIS_67190 6b557def8d36f2d3e2ffdce575937862 296 PRINTS PR00377 Inositol monophosphatase superfamily signature 97 113 3.7E-6 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMIS_67190 6b557def8d36f2d3e2ffdce575937862 296 PRINTS PR00377 Inositol monophosphatase superfamily signature 71 87 3.7E-6 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMIS_67190 6b557def8d36f2d3e2ffdce575937862 296 SUPERFAMILY SSF56655 12 262 3.93E-31 T 14-10-2018 AMIS_67190 6b557def8d36f2d3e2ffdce575937862 296 Gene3D G3DSA:3.30.540.10 5 144 1.4E-23 T 14-10-2018 AMIS_67190 6b557def8d36f2d3e2ffdce575937862 296 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 98 110 - T 14-10-2018 IPR020583 Inositol monophosphatase, metal-binding site AMIS_67190 6b557def8d36f2d3e2ffdce575937862 296 Pfam PF00459 Inositol monophosphatase family 21 261 6.0E-18 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMIS_450 c6586b52d16be9a13942c765811d4a12 499 Gene3D G3DSA:3.90.1310.10 57 393 1.9E-122 T 14-10-2018 AMIS_450 c6586b52d16be9a13942c765811d4a12 499 Pfam PF00905 Penicillin binding protein transpeptidase domain 160 484 6.2E-63 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AMIS_450 c6586b52d16be9a13942c765811d4a12 499 Gene3D G3DSA:3.40.710.10 137 487 1.9E-122 T 14-10-2018 AMIS_450 c6586b52d16be9a13942c765811d4a12 499 SUPERFAMILY SSF56601 95 494 8.18E-81 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMIS_76530 d82063fb3fafe84c2b84540c5e1488d5 391 SUPERFAMILY SSF52172 1 122 1.24E-32 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_76530 d82063fb3fafe84c2b84540c5e1488d5 391 Pfam PF00072 Response regulator receiver domain 4 116 7.0E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_76530 d82063fb3fafe84c2b84540c5e1488d5 391 Pfam PF01339 CheB methylesterase 199 377 9.1E-60 T 14-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AMIS_76530 d82063fb3fafe84c2b84540c5e1488d5 391 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 2 382 37.756 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AMIS_76530 d82063fb3fafe84c2b84540c5e1488d5 391 SUPERFAMILY SSF52738 193 381 4.45E-66 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal AMIS_76530 d82063fb3fafe84c2b84540c5e1488d5 391 PIRSF PIRSF000876 1 386 5.7E-123 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AMIS_76530 d82063fb3fafe84c2b84540c5e1488d5 391 SMART SM00448 2 117 5.7E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_76530 d82063fb3fafe84c2b84540c5e1488d5 391 Gene3D G3DSA:3.40.50.2300 1 132 1.1E-33 T 14-10-2018 AMIS_76530 d82063fb3fafe84c2b84540c5e1488d5 391 Gene3D G3DSA:3.40.50.180 192 388 1.7E-69 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal AMIS_72510 c7b3d4af50f022d393557cec2dabd0e7 115 SUPERFAMILY SSF46785 11 103 2.36E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_72510 c7b3d4af50f022d393557cec2dabd0e7 115 Pfam PF03551 Transcriptional regulator PadR-like family 13 86 1.1E-20 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal AMIS_72510 c7b3d4af50f022d393557cec2dabd0e7 115 Gene3D G3DSA:1.10.10.10 6 109 1.6E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_74020 1f70a327a956d3b5850d3852fa017c34 279 SUPERFAMILY SSF81301 11 64 4.25E-9 T 14-10-2018 AMIS_74020 1f70a327a956d3b5850d3852fa017c34 279 Pfam PF01909 Nucleotidyltransferase domain 24 53 1.8E-6 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 AMIS_74020 1f70a327a956d3b5850d3852fa017c34 279 Gene3D G3DSA:3.30.460.10 4 68 4.2E-6 T 14-10-2018 AMIS_26710 7c0bdeb1de14a3c25b92a2315949cc9f 191 Gene3D G3DSA:3.40.50.360 1 189 3.1E-48 T 14-10-2018 IPR029039 Flavoprotein-like superfamily AMIS_26710 7c0bdeb1de14a3c25b92a2315949cc9f 191 SUPERFAMILY SSF52218 10 177 1.61E-35 T 14-10-2018 IPR029039 Flavoprotein-like superfamily AMIS_26710 7c0bdeb1de14a3c25b92a2315949cc9f 191 Pfam PF03358 NADPH-dependent FMN reductase 10 147 1.2E-35 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AMIS_71160 323fd8687e542078792d0075bfb16896 365 Gene3D G3DSA:3.20.10.10 178 347 4.7E-131 T 14-10-2018 AMIS_71160 323fd8687e542078792d0075bfb16896 365 Gene3D G3DSA:3.30.470.10 32 360 4.7E-131 T 14-10-2018 AMIS_71160 323fd8687e542078792d0075bfb16896 365 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 51 364 2.4E-125 T 14-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 AMIS_71160 323fd8687e542078792d0075bfb16896 365 ProSitePatterns PS00770 Aminotransferases class-IV signature. 240 270 - T 14-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 AMIS_71160 323fd8687e542078792d0075bfb16896 365 Pfam PF01063 Amino-transferase class IV 77 318 4.7E-32 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 AMIS_71160 323fd8687e542078792d0075bfb16896 365 SUPERFAMILY SSF56752 9 362 6.41E-112 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 AMIS_71160 323fd8687e542078792d0075bfb16896 365 PIRSF PIRSF006468 8 365 7.1E-127 T 14-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 AMIS_31560 c1270b686e54fec4f9eb967905a2613a 217 Pfam PF00440 Bacterial regulatory proteins, tetR family 30 73 4.3E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_31560 c1270b686e54fec4f9eb967905a2613a 217 SUPERFAMILY SSF48498 105 207 4.06E-5 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_31560 c1270b686e54fec4f9eb967905a2613a 217 Gene3D G3DSA:1.10.357.10 12 211 6.7E-23 T 14-10-2018 AMIS_31560 c1270b686e54fec4f9eb967905a2613a 217 SUPERFAMILY SSF46689 17 81 3.85E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_52580 0cc632191fcd02948d9b2ab6b3dff519 483 SMART SM00530 19 74 2.4E-15 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMIS_52580 0cc632191fcd02948d9b2ab6b3dff519 483 Pfam PF06114 IrrE N-terminal-like domain 236 309 5.1E-8 T 14-10-2018 IPR010359 IrrE N-terminal-like domain AMIS_52580 0cc632191fcd02948d9b2ab6b3dff519 483 SUPERFAMILY SSF47413 13 78 2.15E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_52580 0cc632191fcd02948d9b2ab6b3dff519 483 Gene3D G3DSA:1.10.260.40 14 91 7.6E-20 T 14-10-2018 AMIS_52580 0cc632191fcd02948d9b2ab6b3dff519 483 Pfam PF13560 Helix-turn-helix domain 16 73 8.2E-14 T 14-10-2018 AMIS_64240 8f8f70c5057d01d38afe7c93d211d3be 303 Pfam PF04545 Sigma-70, region 4 192 240 4.3E-11 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 AMIS_64240 8f8f70c5057d01d38afe7c93d211d3be 303 SUPERFAMILY SSF88659 102 172 1.13E-9 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_64240 8f8f70c5057d01d38afe7c93d211d3be 303 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 24 241 1.0E-25 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_64240 8f8f70c5057d01d38afe7c93d211d3be 303 PIRSF PIRSF000770 2 265 1.1E-61 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMIS_64240 8f8f70c5057d01d38afe7c93d211d3be 303 Gene3D G3DSA:1.20.140.160 98 246 3.1E-34 T 14-10-2018 AMIS_64240 8f8f70c5057d01d38afe7c93d211d3be 303 Pfam PF04539 Sigma-70 region 3 114 179 2.5E-6 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 AMIS_64240 8f8f70c5057d01d38afe7c93d211d3be 303 Pfam PF04542 Sigma-70 region 2 27 99 1.8E-9 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_64240 8f8f70c5057d01d38afe7c93d211d3be 303 Gene3D G3DSA:1.10.1740.10 14 97 3.1E-22 T 14-10-2018 AMIS_64240 8f8f70c5057d01d38afe7c93d211d3be 303 SUPERFAMILY SSF88946 23 99 7.22E-19 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_64240 8f8f70c5057d01d38afe7c93d211d3be 303 SUPERFAMILY SSF88659 164 245 2.06E-16 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_60680 9bb2540c4868825dc196d5f5c292d557 465 Gene3D G3DSA:3.30.300.310 371 465 1.5E-27 T 14-10-2018 AMIS_60680 9bb2540c4868825dc196d5f5c292d557 465 Pfam PF00501 AMP-binding enzyme 35 374 1.5E-54 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMIS_60680 9bb2540c4868825dc196d5f5c292d557 465 Pfam PF13193 AMP-binding enzyme C-terminal domain 384 456 2.7E-18 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AMIS_60680 9bb2540c4868825dc196d5f5c292d557 465 Gene3D G3DSA:3.40.50.12780 7 368 3.6E-85 T 14-10-2018 AMIS_60680 9bb2540c4868825dc196d5f5c292d557 465 SUPERFAMILY SSF56801 16 464 5.1E-101 T 14-10-2018 AMIS_60680 9bb2540c4868825dc196d5f5c292d557 465 ProSitePatterns PS00455 Putative AMP-binding domain signature. 133 144 - T 14-10-2018 IPR020845 AMP-binding, conserved site AMIS_4980 60fc7bdbb4b2cb47012398987d9b43ea 685 Gene3D G3DSA:2.130.10.10 12 166 3.6E-6 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_4980 60fc7bdbb4b2cb47012398987d9b43ea 685 Gene3D G3DSA:2.130.10.10 211 404 2.2E-5 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_4980 60fc7bdbb4b2cb47012398987d9b43ea 685 SUPERFAMILY SSF50969 63 371 4.47E-17 T 14-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like AMIS_47750 9d6f28b17119ed3d187337e633a4cdf8 305 SMART SM00279 184 219 4.9E-9 T 14-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 AMIS_47750 9d6f28b17119ed3d187337e633a4cdf8 305 Gene3D G3DSA:3.40.50.1010 9 288 5.8E-65 T 14-10-2018 AMIS_47750 9d6f28b17119ed3d187337e633a4cdf8 305 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 8 181 8.1E-44 T 14-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 AMIS_47750 9d6f28b17119ed3d187337e633a4cdf8 305 SUPERFAMILY SSF47807 184 298 2.39E-19 T 14-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily AMIS_47750 9d6f28b17119ed3d187337e633a4cdf8 305 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 183 267 1.9E-17 T 14-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 AMIS_47750 9d6f28b17119ed3d187337e633a4cdf8 305 SUPERFAMILY SSF88723 7 155 1.44E-38 T 14-10-2018 IPR029060 PIN-like domain superfamily AMIS_47750 9d6f28b17119ed3d187337e633a4cdf8 305 Gene3D G3DSA:1.10.150.20 185 261 5.8E-65 T 14-10-2018 AMIS_47750 9d6f28b17119ed3d187337e633a4cdf8 305 SMART SM00475 6 275 2.4E-77 T 14-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 AMIS_6930 61bf0f531934efb39d54cfe3044e3f06 437 SUPERFAMILY SSF55486 212 434 9.82E-52 T 14-10-2018 AMIS_6930 61bf0f531934efb39d54cfe3044e3f06 437 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 187 202 1.4E-13 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMIS_6930 61bf0f531934efb39d54cfe3044e3f06 437 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 140 155 1.4E-13 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMIS_6930 61bf0f531934efb39d54cfe3044e3f06 437 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 292 307 1.4E-13 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMIS_6930 61bf0f531934efb39d54cfe3044e3f06 437 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 311 323 1.4E-13 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMIS_6930 61bf0f531934efb39d54cfe3044e3f06 437 Pfam PF01433 Peptidase family M1 domain 290 427 7.0E-27 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMIS_6930 61bf0f531934efb39d54cfe3044e3f06 437 SUPERFAMILY SSF63737 11 203 1.57E-35 T 14-10-2018 AMIS_6930 61bf0f531934efb39d54cfe3044e3f06 437 Gene3D G3DSA:1.10.390.60 212 432 2.1E-38 T 14-10-2018 AMIS_6930 61bf0f531934efb39d54cfe3044e3f06 437 Gene3D G3DSA:2.60.40.1730 23 204 2.7E-28 T 14-10-2018 AMIS_40010 8b825180276cface77e52cff35deb55d 228 SUPERFAMILY SSF53474 45 226 1.18E-34 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_40010 8b825180276cface77e52cff35deb55d 228 SMART SM01110 44 226 2.6E-67 T 14-10-2018 IPR000675 Cutinase/acetylxylan esterase GO:0016787 AMIS_40010 8b825180276cface77e52cff35deb55d 228 Gene3D G3DSA:3.40.50.1820 6 227 1.7E-49 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_40010 8b825180276cface77e52cff35deb55d 228 Pfam PF01083 Cutinase 46 226 2.8E-45 T 14-10-2018 IPR000675 Cutinase/acetylxylan esterase GO:0016787 AMIS_31630 d16684a04668a68caa3b2ffda563850c 334 Gene3D G3DSA:1.10.1040.10 187 330 1.8E-47 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AMIS_31630 d16684a04668a68caa3b2ffda563850c 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 131 151 3.9E-46 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AMIS_31630 d16684a04668a68caa3b2ffda563850c 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 56 83 3.9E-46 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AMIS_31630 d16684a04668a68caa3b2ffda563850c 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 196 220 3.9E-46 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AMIS_31630 d16684a04668a68caa3b2ffda563850c 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 171 195 3.9E-46 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AMIS_31630 d16684a04668a68caa3b2ffda563850c 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 236 253 3.9E-46 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AMIS_31630 d16684a04668a68caa3b2ffda563850c 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 6 23 3.9E-46 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AMIS_31630 d16684a04668a68caa3b2ffda563850c 334 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 2 320 36.515 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AMIS_31630 d16684a04668a68caa3b2ffda563850c 334 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 186 207 - T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AMIS_31630 d16684a04668a68caa3b2ffda563850c 334 PIRSF PIRSF000114 1 328 2.1E-97 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AMIS_31630 d16684a04668a68caa3b2ffda563850c 334 SUPERFAMILY SSF51735 2 178 2.2E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_31630 d16684a04668a68caa3b2ffda563850c 334 Gene3D G3DSA:3.40.50.720 1 185 5.9E-60 T 14-10-2018 AMIS_31630 d16684a04668a68caa3b2ffda563850c 334 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 178 317 5.9E-50 T 14-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AMIS_31630 d16684a04668a68caa3b2ffda563850c 334 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 4 157 2.1E-47 T 14-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AMIS_31630 d16684a04668a68caa3b2ffda563850c 334 SUPERFAMILY SSF48179 178 325 2.38E-50 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMIS_2840 b9b84b6655551600d8c6f190eb16a4e0 223 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 118 134 - T 14-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_2840 b9b84b6655551600d8c6f190eb16a4e0 223 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 37 145 1.8E-23 T 14-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_2840 b9b84b6655551600d8c6f190eb16a4e0 223 SUPERFAMILY SSF56770 9 152 1.83E-63 T 14-10-2018 AMIS_2840 b9b84b6655551600d8c6f190eb16a4e0 223 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 11 151 6.3E-67 T 14-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_2840 b9b84b6655551600d8c6f190eb16a4e0 223 Gene3D G3DSA:3.40.50.12280 2 170 2.2E-71 T 14-10-2018 AMIS_2840 b9b84b6655551600d8c6f190eb16a4e0 223 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 1 151 41.287 T 14-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_18630 3c80c714c885ceca8dedf57a90e9b44c 336 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 16 323 7.6E-105 T 14-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 AMIS_18630 3c80c714c885ceca8dedf57a90e9b44c 336 Pfam PF03741 Integral membrane protein TerC family 80 286 4.6E-47 T 14-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 AMIS_78790 743b48c683d97816730400e910e55b98 249 Gene3D G3DSA:3.40.50.1820 1 245 1.5E-50 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_78790 743b48c683d97816730400e910e55b98 249 Pfam PF01738 Dienelactone hydrolase family 15 246 3.3E-40 T 14-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 AMIS_78790 743b48c683d97816730400e910e55b98 249 SUPERFAMILY SSF53474 2 246 6.83E-44 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_35200 cdd0b26141232bb812e6699b67958d39 1047 SUPERFAMILY SSF46894 2 89 4.25E-11 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_35200 cdd0b26141232bb812e6699b67958d39 1047 Pfam PF03704 Bacterial transcriptional activator domain 96 241 1.3E-37 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain AMIS_35200 cdd0b26141232bb812e6699b67958d39 1047 SMART SM01043 96 241 4.1E-42 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain AMIS_35200 cdd0b26141232bb812e6699b67958d39 1047 Gene3D G3DSA:1.25.40.10 94 257 6.6E-46 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_35200 cdd0b26141232bb812e6699b67958d39 1047 Gene3D G3DSA:3.40.50.300 258 410 1.5E-16 T 14-10-2018 AMIS_35200 cdd0b26141232bb812e6699b67958d39 1047 SUPERFAMILY SSF48452 785 894 5.22E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_35200 cdd0b26141232bb812e6699b67958d39 1047 SMART SM00862 16 89 1.8E-7 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_35200 cdd0b26141232bb812e6699b67958d39 1047 SUPERFAMILY SSF48452 93 260 7.11E-34 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_35200 cdd0b26141232bb812e6699b67958d39 1047 Gene3D G3DSA:1.10.10.10 1 91 1.1E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_35200 cdd0b26141232bb812e6699b67958d39 1047 Gene3D G3DSA:1.25.40.10 721 1013 4.3E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_35200 cdd0b26141232bb812e6699b67958d39 1047 SUPERFAMILY SSF52540 259 530 1.3E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_35200 cdd0b26141232bb812e6699b67958d39 1047 Pfam PF00486 Transcriptional regulatory protein, C terminal 27 77 7.4E-6 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_11470 e04c2905643161b3911ed344715febc0 146 Gene3D G3DSA:3.40.630.30 2 143 1.2E-28 T 14-10-2018 AMIS_11470 e04c2905643161b3911ed344715febc0 146 Pfam PF00583 Acetyltransferase (GNAT) family 20 123 2.1E-12 T 14-10-2018 IPR000182 GNAT domain AMIS_11470 e04c2905643161b3911ed344715febc0 146 SUPERFAMILY SSF55729 6 129 2.16E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_36170 dd0360b918f961be5d491f01fd0bc856 359 Gene3D G3DSA:3.30.70.360 166 272 8.3E-85 T 14-10-2018 AMIS_36170 dd0360b918f961be5d491f01fd0bc856 359 Gene3D G3DSA:3.40.630.10 10 345 8.3E-85 T 14-10-2018 AMIS_36170 dd0360b918f961be5d491f01fd0bc856 359 PIRSF PIRSF037238 1 357 8.6E-86 T 14-10-2018 IPR017150 Peptidase M20, glutamate carboxypeptidase AMIS_36170 dd0360b918f961be5d491f01fd0bc856 359 Pfam PF01546 Peptidase family M20/M25/M40 65 353 6.3E-18 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 AMIS_36170 dd0360b918f961be5d491f01fd0bc856 359 SUPERFAMILY SSF53187 5 357 3.28E-38 T 14-10-2018 AMIS_36170 dd0360b918f961be5d491f01fd0bc856 359 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 64 73 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AMIS_36170 dd0360b918f961be5d491f01fd0bc856 359 SUPERFAMILY SSF55031 166 257 2.36E-15 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AMIS_36170 dd0360b918f961be5d491f01fd0bc856 359 Pfam PF07687 Peptidase dimerisation domain 163 254 9.4E-15 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain AMIS_5110 7b5d29d6034c5b9b7ecfa70d37dc2eb3 355 Gene3D G3DSA:3.20.20.70 6 353 5.6E-147 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_5110 7b5d29d6034c5b9b7ecfa70d37dc2eb3 355 SUPERFAMILY SSF51569 12 350 2.09E-124 T 14-10-2018 AMIS_5110 7b5d29d6034c5b9b7ecfa70d37dc2eb3 355 PIRSF PIRSF001361 1 355 1.5E-149 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AMIS_5110 7b5d29d6034c5b9b7ecfa70d37dc2eb3 355 Pfam PF00793 DAHP synthetase I family 47 341 4.7E-91 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AMIS_5110 7b5d29d6034c5b9b7ecfa70d37dc2eb3 355 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 11 351 1.9E-145 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AMIS_78440 93cb79632ca085831405747d77753873 589 SUPERFAMILY SSF51120 161 328 1.22E-27 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_78440 93cb79632ca085831405747d77753873 589 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 166 183 0.025 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_78440 93cb79632ca085831405747d77753873 589 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 239 255 0.029 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_78440 93cb79632ca085831405747d77753873 589 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 257 273 0.027 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_78440 93cb79632ca085831405747d77753873 589 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 377 394 0.042 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_78440 93cb79632ca085831405747d77753873 589 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 148 165 0.015 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_78440 93cb79632ca085831405747d77753873 589 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 447 460 4.3 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_78440 93cb79632ca085831405747d77753873 589 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 299 312 5.5 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_78440 93cb79632ca085831405747d77753873 589 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 185 201 0.0063 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_78440 93cb79632ca085831405747d77753873 589 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 359 376 0.025 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_78440 93cb79632ca085831405747d77753873 589 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 415 432 0.0015 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_78440 93cb79632ca085831405747d77753873 589 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 518 525 18.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_78440 93cb79632ca085831405747d77753873 589 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 203 219 0.081 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_78440 93cb79632ca085831405747d77753873 589 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 221 237 0.18 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_78440 93cb79632ca085831405747d77753873 589 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 283 290 30.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_78440 93cb79632ca085831405747d77753873 589 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 536 546 8.5 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_78440 93cb79632ca085831405747d77753873 589 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 121 138 3.1E-4 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_78440 93cb79632ca085831405747d77753873 589 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 374 392 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site AMIS_78440 93cb79632ca085831405747d77753873 589 PRINTS PR00313 NodO calcium binding signature 257 265 2.4E-11 T 14-10-2018 AMIS_78440 93cb79632ca085831405747d77753873 589 PRINTS PR00313 NodO calcium binding signature 221 229 2.4E-11 T 14-10-2018 AMIS_78440 93cb79632ca085831405747d77753873 589 PRINTS PR00313 NodO calcium binding signature 155 166 2.4E-11 T 14-10-2018 AMIS_78440 93cb79632ca085831405747d77753873 589 PRINTS PR00313 NodO calcium binding signature 284 293 2.4E-11 T 14-10-2018 AMIS_78440 93cb79632ca085831405747d77753873 589 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 217 235 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site AMIS_78440 93cb79632ca085831405747d77753873 589 Gene3D G3DSA:2.150.10.10 248 353 7.3E-12 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_78440 93cb79632ca085831405747d77753873 589 Gene3D G3DSA:2.150.10.10 207 247 3.2E-8 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_78440 93cb79632ca085831405747d77753873 589 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 244 262 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site AMIS_78440 93cb79632ca085831405747d77753873 589 SUPERFAMILY SSF51120 411 562 5.02E-10 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_78440 93cb79632ca085831405747d77753873 589 Gene3D G3DSA:2.150.10.10 79 163 3.2E-12 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_78440 93cb79632ca085831405747d77753873 589 Gene3D G3DSA:2.150.10.10 164 206 1.1E-10 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_78440 93cb79632ca085831405747d77753873 589 SUPERFAMILY SSF51120 299 467 1.36E-14 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_78440 93cb79632ca085831405747d77753873 589 SUPERFAMILY SSF51120 20 172 1.44E-19 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_78440 93cb79632ca085831405747d77753873 589 Gene3D G3DSA:2.150.10.10 354 406 5.7E-9 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_78440 93cb79632ca085831405747d77753873 589 Gene3D G3DSA:2.150.10.10 407 496 1.2E-9 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_24040 fc9df104fcd324bc4712b6f96e76cba6 365 SUPERFAMILY SSF53098 178 330 7.97E-15 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily AMIS_24040 fc9df104fcd324bc4712b6f96e76cba6 365 Pfam PF13683 Integrase core domain 264 328 2.5E-8 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AMIS_54730 0b604d8105176a527f42a3d72f4f1d05 588 Pfam PF00553 Cellulose binding domain 38 137 3.0E-28 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 AMIS_54730 0b604d8105176a527f42a3d72f4f1d05 588 PRINTS PR00733 Glycosyl hydrolase family 6 signature 192 211 1.8E-35 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 AMIS_54730 0b604d8105176a527f42a3d72f4f1d05 588 PRINTS PR00733 Glycosyl hydrolase family 6 signature 450 463 1.8E-35 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 AMIS_54730 0b604d8105176a527f42a3d72f4f1d05 588 PRINTS PR00733 Glycosyl hydrolase family 6 signature 387 397 1.8E-35 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 AMIS_54730 0b604d8105176a527f42a3d72f4f1d05 588 PRINTS PR00733 Glycosyl hydrolase family 6 signature 491 511 1.8E-35 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 AMIS_54730 0b604d8105176a527f42a3d72f4f1d05 588 PRINTS PR00733 Glycosyl hydrolase family 6 signature 348 361 1.8E-35 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 AMIS_54730 0b604d8105176a527f42a3d72f4f1d05 588 PRINTS PR00733 Glycosyl hydrolase family 6 signature 514 528 1.8E-35 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 AMIS_54730 0b604d8105176a527f42a3d72f4f1d05 588 PRINTS PR00733 Glycosyl hydrolase family 6 signature 244 257 1.8E-35 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 AMIS_54730 0b604d8105176a527f42a3d72f4f1d05 588 PIRSF PIRSF001100 11 588 3.7E-114 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 AMIS_54730 0b604d8105176a527f42a3d72f4f1d05 588 SMART SM00637 38 137 3.6E-42 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 AMIS_54730 0b604d8105176a527f42a3d72f4f1d05 588 ProSitePatterns PS00655 Glycosyl hydrolases family 6 signature 1. 249 265 - T 14-10-2018 IPR001524 Glycoside hydrolase, family 6, conserved site GO:0004553|GO:0005975 AMIS_54730 0b604d8105176a527f42a3d72f4f1d05 588 Gene3D G3DSA:2.60.40.290 31 139 7.8E-33 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 AMIS_54730 0b604d8105176a527f42a3d72f4f1d05 588 Gene3D G3DSA:3.20.20.40 172 588 1.7E-166 T 14-10-2018 IPR036434 1, 4-beta cellobiohydrolase superfamily GO:0004553|GO:0030245 AMIS_54730 0b604d8105176a527f42a3d72f4f1d05 588 SUPERFAMILY SSF51989 174 588 4.71E-100 T 14-10-2018 IPR036434 1, 4-beta cellobiohydrolase superfamily GO:0004553|GO:0030245 AMIS_54730 0b604d8105176a527f42a3d72f4f1d05 588 Pfam PF01341 Glycosyl hydrolases family 6 194 536 3.5E-89 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 AMIS_54730 0b604d8105176a527f42a3d72f4f1d05 588 SUPERFAMILY SSF49384 34 139 4.6E-29 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 AMIS_4550 9404b9a382ae9d3fbdefddf6c3fd00a8 408 Gene3D G3DSA:3.20.20.80 47 396 6.5E-114 T 14-10-2018 AMIS_4550 9404b9a382ae9d3fbdefddf6c3fd00a8 408 Pfam PF00704 Glycosyl hydrolases family 18 45 395 1.3E-62 T 14-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 AMIS_4550 9404b9a382ae9d3fbdefddf6c3fd00a8 408 SMART SM00636 43 395 1.3E-92 T 14-10-2018 IPR011583 Chitinase II GO:0008061 AMIS_4550 9404b9a382ae9d3fbdefddf6c3fd00a8 408 SUPERFAMILY SSF51445 38 399 7.54E-73 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_4550 9404b9a382ae9d3fbdefddf6c3fd00a8 408 SUPERFAMILY SSF54556 307 366 9.62E-10 T 14-10-2018 IPR029070 Chitinase insertion domain superfamily AMIS_4550 9404b9a382ae9d3fbdefddf6c3fd00a8 408 Gene3D G3DSA:3.10.50.10 310 370 6.5E-114 T 14-10-2018 IPR029070 Chitinase insertion domain superfamily AMIS_4550 9404b9a382ae9d3fbdefddf6c3fd00a8 408 ProSitePatterns PS01095 Chitinases family 18 active site. 177 185 - T 14-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AMIS_15590 00abc90e014fcdd766885fcf2ad0212e 251 SUPERFAMILY SSF50475 3 236 2.65E-16 T 14-10-2018 AMIS_15590 00abc90e014fcdd766885fcf2ad0212e 251 Pfam PF10615 Protein of unknown function (DUF2470) 164 230 6.1E-6 T 14-10-2018 IPR019595 Domain of unknown function DUF2470 AMIS_15590 00abc90e014fcdd766885fcf2ad0212e 251 Gene3D G3DSA:3.20.180.10 153 237 1.6E-8 T 14-10-2018 IPR037119 Haem oxygenase HugZ-like superfamily AMIS_15590 00abc90e014fcdd766885fcf2ad0212e 251 Gene3D G3DSA:2.30.110.10 1 152 7.0E-5 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AMIS_40930 fe27054149654648c126b917ee1a6994 161 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 12 144 5.7E-20 T 14-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like AMIS_40930 fe27054149654648c126b917ee1a6994 161 Gene3D G3DSA:3.30.530.20 2 152 3.6E-28 T 14-10-2018 IPR023393 START-like domain superfamily AMIS_40930 fe27054149654648c126b917ee1a6994 161 SUPERFAMILY SSF55961 4 149 5.26E-26 T 14-10-2018 AMIS_53400 132e2dd29b8babf8b76e8419239c77c4 566 Gene3D G3DSA:3.40.50.12780 294 433 1.7E-33 T 14-10-2018 AMIS_53400 132e2dd29b8babf8b76e8419239c77c4 566 Pfam PF00501 AMP-binding enzyme 4 436 2.6E-91 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMIS_53400 132e2dd29b8babf8b76e8419239c77c4 566 ProSitePatterns PS00455 Putative AMP-binding domain signature. 168 179 - T 14-10-2018 IPR020845 AMP-binding, conserved site AMIS_53400 132e2dd29b8babf8b76e8419239c77c4 566 SUPERFAMILY SSF56801 2 565 1.44E-114 T 14-10-2018 AMIS_53400 132e2dd29b8babf8b76e8419239c77c4 566 Gene3D G3DSA:3.40.50.12780 1 289 1.5E-50 T 14-10-2018 AMIS_11290 acc42371b01bfa21950e4957e58af5af 876 SUPERFAMILY SSF47323 584 820 4.67E-56 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMIS_11290 acc42371b01bfa21950e4957e58af5af 876 Hamap MF_02004 Valine--tRNA ligase [valS]. 18 874 15.291 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AMIS_11290 acc42371b01bfa21950e4957e58af5af 876 SUPERFAMILY SSF50677 209 347 2.09E-53 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AMIS_11290 acc42371b01bfa21950e4957e58af5af 876 Gene3D G3DSA:1.10.730.10 19 743 3.1E-303 T 14-10-2018 AMIS_11290 acc42371b01bfa21950e4957e58af5af 876 Gene3D G3DSA:1.10.287.380 803 874 3.1E-15 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 AMIS_11290 acc42371b01bfa21950e4957e58af5af 876 Gene3D G3DSA:3.90.740.10 191 355 3.1E-303 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AMIS_11290 acc42371b01bfa21950e4957e58af5af 876 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 59 70 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMIS_11290 acc42371b01bfa21950e4957e58af5af 876 SUPERFAMILY SSF52374 20 583 9.98E-140 T 14-10-2018 AMIS_11290 acc42371b01bfa21950e4957e58af5af 876 TIGRFAM TIGR00422 valS: valine--tRNA ligase 20 853 0.0 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AMIS_11290 acc42371b01bfa21950e4957e58af5af 876 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 450 571 2.5E-47 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMIS_11290 acc42371b01bfa21950e4957e58af5af 876 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 31 438 2.3E-147 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMIS_11290 acc42371b01bfa21950e4957e58af5af 876 Gene3D G3DSA:3.40.50.620 38 534 3.1E-303 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMIS_11290 acc42371b01bfa21950e4957e58af5af 876 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 809 873 1.4E-14 T 14-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 AMIS_11290 acc42371b01bfa21950e4957e58af5af 876 Pfam PF08264 Anticodon-binding domain of tRNA 615 756 2.4E-44 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 AMIS_11290 acc42371b01bfa21950e4957e58af5af 876 SUPERFAMILY SSF46589 809 873 1.15E-13 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 AMIS_11290 acc42371b01bfa21950e4957e58af5af 876 PRINTS PR00986 Valyl-tRNA synthetase signature 52 63 1.5E-38 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AMIS_11290 acc42371b01bfa21950e4957e58af5af 876 PRINTS PR00986 Valyl-tRNA synthetase signature 453 474 1.5E-38 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AMIS_11290 acc42371b01bfa21950e4957e58af5af 876 PRINTS PR00986 Valyl-tRNA synthetase signature 244 261 1.5E-38 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AMIS_11290 acc42371b01bfa21950e4957e58af5af 876 PRINTS PR00986 Valyl-tRNA synthetase signature 359 372 1.5E-38 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AMIS_11290 acc42371b01bfa21950e4957e58af5af 876 PRINTS PR00986 Valyl-tRNA synthetase signature 484 502 1.5E-38 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AMIS_24490 925ac1ae3fa5f2e23c9b13eda90eabf9 606 Pfam PF00005 ABC transporter 326 471 5.9E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_24490 925ac1ae3fa5f2e23c9b13eda90eabf9 606 SUPERFAMILY SSF52540 310 518 1.03E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_24490 925ac1ae3fa5f2e23c9b13eda90eabf9 606 SMART SM00382 40 231 2.4E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_24490 925ac1ae3fa5f2e23c9b13eda90eabf9 606 SMART SM00382 335 520 6.3E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_24490 925ac1ae3fa5f2e23c9b13eda90eabf9 606 Gene3D G3DSA:3.40.50.300 10 268 6.4E-60 T 14-10-2018 AMIS_24490 925ac1ae3fa5f2e23c9b13eda90eabf9 606 SUPERFAMILY SSF52540 28 245 8.75E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_24490 925ac1ae3fa5f2e23c9b13eda90eabf9 606 ProSitePatterns PS00211 ABC transporters family signature. 444 458 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_24490 925ac1ae3fa5f2e23c9b13eda90eabf9 606 Pfam PF00005 ABC transporter 32 182 3.5E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_64400 0d246d5dd11fde10aeff982748f22211 562 Gene3D G3DSA:3.10.105.10 281 522 5.3E-135 T 14-10-2018 AMIS_64400 0d246d5dd11fde10aeff982748f22211 562 Gene3D G3DSA:3.90.76.10 76 181 5.3E-135 T 14-10-2018 AMIS_64400 0d246d5dd11fde10aeff982748f22211 562 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 90 449 1.4E-66 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain AMIS_64400 0d246d5dd11fde10aeff982748f22211 562 PIRSF PIRSF002741 1 537 1.1E-64 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AMIS_64400 0d246d5dd11fde10aeff982748f22211 562 SUPERFAMILY SSF53850 44 540 6.88E-90 T 14-10-2018 AMIS_64400 0d246d5dd11fde10aeff982748f22211 562 Gene3D G3DSA:3.40.190.10 56 543 5.3E-135 T 14-10-2018 AMIS_69390 3fa054b73cadeec7e98fb1858efa0d3e 187 SUPERFAMILY SSF55729 6 168 4.53E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_69390 3fa054b73cadeec7e98fb1858efa0d3e 187 Pfam PF00583 Acetyltransferase (GNAT) family 59 148 7.7E-6 T 14-10-2018 IPR000182 GNAT domain AMIS_69390 3fa054b73cadeec7e98fb1858efa0d3e 187 Gene3D G3DSA:3.40.630.30 6 185 4.4E-31 T 14-10-2018 AMIS_36330 14ef75576c393d809af9bf21d65a547b 281 Gene3D G3DSA:3.40.50.1820 3 274 6.2E-50 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_36330 14ef75576c393d809af9bf21d65a547b 281 PRINTS PR00111 Alpha/beta hydrolase fold signature 220 234 2.7E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_36330 14ef75576c393d809af9bf21d65a547b 281 PRINTS PR00111 Alpha/beta hydrolase fold signature 92 105 2.7E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_36330 14ef75576c393d809af9bf21d65a547b 281 PRINTS PR00111 Alpha/beta hydrolase fold signature 49 64 2.7E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_36330 14ef75576c393d809af9bf21d65a547b 281 SUPERFAMILY SSF53474 3 272 5.77E-42 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_36330 14ef75576c393d809af9bf21d65a547b 281 Pfam PF12697 Alpha/beta hydrolase family 27 265 3.0E-14 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_19430 18f0688c5fc6d417e26940134091844b 512 Pfam PF13193 AMP-binding enzyme C-terminal domain 416 494 1.8E-17 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AMIS_19430 18f0688c5fc6d417e26940134091844b 512 ProSitePatterns PS00455 Putative AMP-binding domain signature. 158 169 - T 14-10-2018 IPR020845 AMP-binding, conserved site AMIS_19430 18f0688c5fc6d417e26940134091844b 512 SUPERFAMILY SSF56801 9 507 7.72E-123 T 14-10-2018 AMIS_19430 18f0688c5fc6d417e26940134091844b 512 Pfam PF00501 AMP-binding enzyme 9 407 1.3E-71 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMIS_19430 18f0688c5fc6d417e26940134091844b 512 Gene3D G3DSA:3.40.50.12780 6 400 1.1E-91 T 14-10-2018 AMIS_19430 18f0688c5fc6d417e26940134091844b 512 Gene3D G3DSA:3.30.300.310 403 508 1.4E-30 T 14-10-2018 AMIS_15160 c3596b9fa4921a9656daf2187efad928 350 Pfam PF01795 MraW methylase family 11 319 2.2E-105 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 AMIS_15160 c3596b9fa4921a9656daf2187efad928 350 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 12 319 35.036 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 AMIS_15160 c3596b9fa4921a9656daf2187efad928 350 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 11 318 2.2E-87 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 AMIS_15160 c3596b9fa4921a9656daf2187efad928 350 SUPERFAMILY SSF81799 123 224 2.62E-32 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 AMIS_15160 c3596b9fa4921a9656daf2187efad928 350 SUPERFAMILY SSF53335 12 319 2.81E-36 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_15160 c3596b9fa4921a9656daf2187efad928 350 Gene3D G3DSA:3.40.50.150 12 315 1.6E-90 T 14-10-2018 AMIS_15160 c3596b9fa4921a9656daf2187efad928 350 Gene3D G3DSA:1.10.150.170 121 226 1.6E-90 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 AMIS_15160 c3596b9fa4921a9656daf2187efad928 350 PIRSF PIRSF004486 7 320 4.6E-93 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 AMIS_76250 82d1cd1f2ebd901941f26ac2b7cbe0fa 128 Pfam PF02049 Flagellar hook-basal body complex protein FliE 47 127 1.6E-21 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AMIS_76250 82d1cd1f2ebd901941f26ac2b7cbe0fa 128 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 27 128 13.34 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AMIS_76250 82d1cd1f2ebd901941f26ac2b7cbe0fa 128 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 58 74 7.5E-6 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AMIS_76250 82d1cd1f2ebd901941f26ac2b7cbe0fa 128 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 113 126 7.5E-6 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AMIS_46690 0a62ee6b94c94dc221a92d77a9b98ead 602 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 476 490 - T 14-10-2018 IPR019775 WD40 repeat, conserved site AMIS_46690 0a62ee6b94c94dc221a92d77a9b98ead 602 Pfam PF00400 WD domain, G-beta repeat 308 341 0.074 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_46690 0a62ee6b94c94dc221a92d77a9b98ead 602 Pfam PF00400 WD domain, G-beta repeat 559 589 4.6E-4 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_46690 0a62ee6b94c94dc221a92d77a9b98ead 602 Gene3D G3DSA:2.130.10.10 429 539 1.1E-12 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_46690 0a62ee6b94c94dc221a92d77a9b98ead 602 Gene3D G3DSA:2.130.10.10 18 206 1.8E-12 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_46690 0a62ee6b94c94dc221a92d77a9b98ead 602 Gene3D G3DSA:2.130.10.10 216 428 1.6E-22 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_46690 0a62ee6b94c94dc221a92d77a9b98ead 602 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 372 386 - T 14-10-2018 IPR019775 WD40 repeat, conserved site AMIS_46690 0a62ee6b94c94dc221a92d77a9b98ead 602 Gene3D G3DSA:2.130.10.10 550 602 2.8E-9 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_46690 0a62ee6b94c94dc221a92d77a9b98ead 602 SMART SM00320 300 341 0.011 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_46690 0a62ee6b94c94dc221a92d77a9b98ead 602 SMART SM00320 115 153 39.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_46690 0a62ee6b94c94dc221a92d77a9b98ead 602 SMART SM00320 552 589 8.8E-5 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_46690 0a62ee6b94c94dc221a92d77a9b98ead 602 SMART SM00320 492 533 16.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_46690 0a62ee6b94c94dc221a92d77a9b98ead 602 SMART SM00320 256 297 53.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_46690 0a62ee6b94c94dc221a92d77a9b98ead 602 SMART SM00320 454 489 130.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_46690 0a62ee6b94c94dc221a92d77a9b98ead 602 SUPERFAMILY SSF50998 31 391 1.33E-25 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AMIS_46690 0a62ee6b94c94dc221a92d77a9b98ead 602 SUPERFAMILY SSF50978 270 592 4.76E-33 T 14-10-2018 IPR036322 WD40-repeat-containing domain superfamily GO:0005515 AMIS_46690 0a62ee6b94c94dc221a92d77a9b98ead 602 PRINTS PR00320 G protein beta WD-40 repeat signature 576 590 1.8E-6 T 14-10-2018 IPR020472 G-protein beta WD-40 repeat AMIS_46690 0a62ee6b94c94dc221a92d77a9b98ead 602 PRINTS PR00320 G protein beta WD-40 repeat signature 284 298 1.8E-6 T 14-10-2018 IPR020472 G-protein beta WD-40 repeat AMIS_46690 0a62ee6b94c94dc221a92d77a9b98ead 602 PRINTS PR00320 G protein beta WD-40 repeat signature 328 342 1.8E-6 T 14-10-2018 IPR020472 G-protein beta WD-40 repeat AMIS_46690 0a62ee6b94c94dc221a92d77a9b98ead 602 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 576 590 - T 14-10-2018 IPR019775 WD40 repeat, conserved site AMIS_70030 7554d4e7ef08a1e4e1aae653725da7aa 392 Gene3D G3DSA:3.20.20.70 91 362 5.1E-96 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_70030 7554d4e7ef08a1e4e1aae653725da7aa 392 Gene3D G3DSA:1.10.150.530 28 85 2.3E-8 T 14-10-2018 AMIS_70030 7554d4e7ef08a1e4e1aae653725da7aa 392 SUPERFAMILY SSF102114 123 347 6.93E-16 T 14-10-2018 AMIS_70030 7554d4e7ef08a1e4e1aae653725da7aa 392 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 30 378 8.9E-97 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 AMIS_70030 7554d4e7ef08a1e4e1aae653725da7aa 392 SMART SM00729 127 349 0.0022 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AMIS_70030 7554d4e7ef08a1e4e1aae653725da7aa 392 Pfam PF04055 Radical SAM superfamily 132 305 1.6E-18 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMIS_70030 7554d4e7ef08a1e4e1aae653725da7aa 392 PIRSF PIRSF006004 20 389 1.3E-121 T 14-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 AMIS_70030 7554d4e7ef08a1e4e1aae653725da7aa 392 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 27 377 68.75 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 AMIS_38800 0e6c8d1d6e5156310cf251d6cee54f4b 362 Gene3D G3DSA:3.30.565.10 219 361 2.8E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_38800 0e6c8d1d6e5156310cf251d6cee54f4b 362 SUPERFAMILY SSF47384 136 216 2.55E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_38800 0e6c8d1d6e5156310cf251d6cee54f4b 362 Pfam PF00512 His Kinase A (phospho-acceptor) domain 154 215 6.8E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_38800 0e6c8d1d6e5156310cf251d6cee54f4b 362 SMART SM00388 152 216 4.2E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_38800 0e6c8d1d6e5156310cf251d6cee54f4b 362 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 258 347 3.5E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_38800 0e6c8d1d6e5156310cf251d6cee54f4b 362 SMART SM00387 257 360 9.5E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_38800 0e6c8d1d6e5156310cf251d6cee54f4b 362 PRINTS PR00344 Bacterial sensor protein C-terminal signature 321 339 7.3E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_38800 0e6c8d1d6e5156310cf251d6cee54f4b 362 PRINTS PR00344 Bacterial sensor protein C-terminal signature 292 306 7.3E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_38800 0e6c8d1d6e5156310cf251d6cee54f4b 362 SUPERFAMILY SSF55874 206 358 1.31E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_38800 0e6c8d1d6e5156310cf251d6cee54f4b 362 Gene3D G3DSA:1.10.287.130 127 214 6.3E-12 T 14-10-2018 AMIS_44000 4f7ac029593cc125f3885c3409a06738 287 Gene3D G3DSA:3.40.50.720 120 270 1.5E-64 T 14-10-2018 AMIS_44000 4f7ac029593cc125f3885c3409a06738 287 PIRSF PIRSF001439 1 169 5.1E-27 T 14-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 AMIS_44000 4f7ac029593cc125f3885c3409a06738 287 PIRSF PIRSF001439 159 287 1.6E-22 T 14-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 AMIS_44000 4f7ac029593cc125f3885c3409a06738 287 Gene3D G3DSA:3.30.1780.10 6 284 1.5E-64 T 14-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 AMIS_44000 4f7ac029593cc125f3885c3409a06738 287 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 7 283 4.5E-29 T 14-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 AMIS_44000 4f7ac029593cc125f3885c3409a06738 287 SUPERFAMILY SSF51735 1 285 7.88E-59 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_56460 80f1815aae5f161293c9e668a8ca422b 556 Pfam PF00732 GMC oxidoreductase 5 274 4.5E-15 T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AMIS_56460 80f1815aae5f161293c9e668a8ca422b 556 Pfam PF05199 GMC oxidoreductase 452 509 1.0E-17 T 14-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 AMIS_56460 80f1815aae5f161293c9e668a8ca422b 556 Gene3D G3DSA:3.50.50.60 3 160 3.1E-25 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_56460 80f1815aae5f161293c9e668a8ca422b 556 Gene3D G3DSA:3.50.50.60 183 324 4.0E-27 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_56460 80f1815aae5f161293c9e668a8ca422b 556 Gene3D G3DSA:3.50.50.60 426 514 5.1E-20 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_56460 80f1815aae5f161293c9e668a8ca422b 556 SUPERFAMILY SSF51905 1 514 3.17E-49 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_80130 6029a89ed03f4d89cb4119f59d3d5858 416 Gene3D G3DSA:2.40.50.900 66 147 1.2E-22 T 14-10-2018 AMIS_80130 6029a89ed03f4d89cb4119f59d3d5858 416 Pfam PF05108 Type VII secretion system ESX-1, transport TM domain B 2 413 3.8E-65 T 14-10-2018 IPR007795 Type VII secretion system EccB AMIS_80130 6029a89ed03f4d89cb4119f59d3d5858 416 TIGRFAM TIGR03919 T7SS_EccB: type VII secretion protein EccB 3 408 3.1E-67 T 14-10-2018 IPR007795 Type VII secretion system EccB AMIS_27810 a6503b8ec14eadfd55850bd134cdb02d 216 SUPERFAMILY SSF102198 4 212 1.14E-51 T 14-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 AMIS_27810 a6503b8ec14eadfd55850bd134cdb02d 216 Gene3D G3DSA:3.50.30.50 2 216 1.2E-52 T 14-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 AMIS_27810 a6503b8ec14eadfd55850bd134cdb02d 216 Pfam PF04199 Putative cyclase 7 154 5.7E-25 T 14-10-2018 IPR007325 Kynurenine formamidase/cyclase-like GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 AMIS_57680 67c8dc80c7f308d002fcfe2e18d9feb3 335 Gene3D G3DSA:1.10.260.40 1 53 2.6E-22 T 14-10-2018 AMIS_57680 67c8dc80c7f308d002fcfe2e18d9feb3 335 SUPERFAMILY SSF53822 57 310 5.62E-58 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_57680 67c8dc80c7f308d002fcfe2e18d9feb3 335 Gene3D G3DSA:3.40.50.2300 156 317 8.6E-70 T 14-10-2018 AMIS_57680 67c8dc80c7f308d002fcfe2e18d9feb3 335 SUPERFAMILY SSF47413 1 55 2.4E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_57680 67c8dc80c7f308d002fcfe2e18d9feb3 335 Pfam PF13377 Periplasmic binding protein-like domain 165 323 5.0E-41 T 14-10-2018 AMIS_57680 67c8dc80c7f308d002fcfe2e18d9feb3 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 1 45 4.3E-18 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_57680 67c8dc80c7f308d002fcfe2e18d9feb3 335 Gene3D G3DSA:3.40.50.2300 75 314 8.6E-70 T 14-10-2018 AMIS_57680 67c8dc80c7f308d002fcfe2e18d9feb3 335 SMART SM00354 1 68 7.9E-26 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_79640 e5686c4b399f16ec4cccc19b0b73ce02 153 Gene3D G3DSA:3.30.1330.40 1 152 3.5E-51 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AMIS_79640 e5686c4b399f16ec4cccc19b0b73ce02 153 Pfam PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease 7 151 1.6E-30 T 14-10-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AMIS_79640 e5686c4b399f16ec4cccc19b0b73ce02 153 SUPERFAMILY SSF55298 4 151 1.35E-48 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AMIS_42000 5f997134d5948e3f6f7fafd801403988 936 SUPERFAMILY SSF53383 457 929 9.85E-98 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_42000 5f997134d5948e3f6f7fafd801403988 936 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 1 934 24.886 T 14-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AMIS_42000 5f997134d5948e3f6f7fafd801403988 936 Gene3D G3DSA:3.90.1150.10 743 881 4.5E-37 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMIS_42000 5f997134d5948e3f6f7fafd801403988 936 SUPERFAMILY SSF53383 8 432 2.51E-104 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_42000 5f997134d5948e3f6f7fafd801403988 936 Pfam PF02347 Glycine cleavage system P-protein 8 432 1.8E-180 T 14-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AMIS_42000 5f997134d5948e3f6f7fafd801403988 936 Pfam PF02347 Glycine cleavage system P-protein 459 716 1.5E-11 T 14-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AMIS_42000 5f997134d5948e3f6f7fafd801403988 936 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 8 928 0.0 T 14-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AMIS_42000 5f997134d5948e3f6f7fafd801403988 936 Gene3D G3DSA:3.40.640.10 86 346 7.7E-105 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_42000 5f997134d5948e3f6f7fafd801403988 936 Gene3D G3DSA:3.40.640.10 502 732 2.6E-59 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_37570 128ec83e84c310e54b2c23d0a003ba8d 451 SMART SM00345 25 84 5.6E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_37570 128ec83e84c310e54b2c23d0a003ba8d 451 Gene3D G3DSA:1.10.10.10 23 89 7.8E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_37570 128ec83e84c310e54b2c23d0a003ba8d 451 SUPERFAMILY SSF46785 24 88 2.3E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_37570 128ec83e84c310e54b2c23d0a003ba8d 451 Pfam PF00392 Bacterial regulatory proteins, gntR family 24 84 2.6E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_37570 128ec83e84c310e54b2c23d0a003ba8d 451 Gene3D G3DSA:3.40.640.10 134 344 2.2E-47 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_37570 128ec83e84c310e54b2c23d0a003ba8d 451 SUPERFAMILY SSF53383 107 434 2.9E-54 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_37570 128ec83e84c310e54b2c23d0a003ba8d 451 Gene3D G3DSA:3.90.1150.10 108 429 2.2E-47 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMIS_59140 348c761d5e2982a4e1f4b9345c1a1d1a 839 Gene3D G3DSA:2.40.40.20 641 815 1.2E-57 T 14-10-2018 AMIS_59140 348c761d5e2982a4e1f4b9345c1a1d1a 839 Gene3D G3DSA:3.40.228.10 1 283 5.1E-59 T 14-10-2018 AMIS_59140 348c761d5e2982a4e1f4b9345c1a1d1a 839 SUPERFAMILY SSF50692 631 815 1.72E-34 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily AMIS_59140 348c761d5e2982a4e1f4b9345c1a1d1a 839 Pfam PF00384 Molybdopterin oxidoreductase 4 382 3.4E-10 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_59140 348c761d5e2982a4e1f4b9345c1a1d1a 839 Pfam PF00384 Molybdopterin oxidoreductase 411 453 7.7E-5 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_59140 348c761d5e2982a4e1f4b9345c1a1d1a 839 Pfam PF01568 Molydopterin dinucleotide binding domain 691 800 2.8E-12 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 AMIS_59140 348c761d5e2982a4e1f4b9345c1a1d1a 839 Gene3D G3DSA:3.40.50.740 320 481 5.1E-58 T 14-10-2018 AMIS_59140 348c761d5e2982a4e1f4b9345c1a1d1a 839 Gene3D G3DSA:3.40.228.10 548 640 5.6E-23 T 14-10-2018 AMIS_59140 348c761d5e2982a4e1f4b9345c1a1d1a 839 SUPERFAMILY SSF53706 1 651 8.25E-187 T 14-10-2018 AMIS_63550 e22ba9f564e02ba04d665a26d4c7df44 419 Pfam PF13560 Helix-turn-helix domain 11 71 1.5E-8 T 14-10-2018 AMIS_63550 e22ba9f564e02ba04d665a26d4c7df44 419 Gene3D G3DSA:1.10.260.40 8 73 2.8E-11 T 14-10-2018 AMIS_63550 e22ba9f564e02ba04d665a26d4c7df44 419 SUPERFAMILY SSF47413 7 72 2.73E-11 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_63550 e22ba9f564e02ba04d665a26d4c7df44 419 SMART SM00530 14 70 3.8E-9 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMIS_27410 0b15e195a1639bc7d1fc614f83530efd 289 Pfam PF00561 alpha/beta hydrolase fold 22 128 2.4E-22 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_27410 0b15e195a1639bc7d1fc614f83530efd 289 PRINTS PR00412 Epoxide hydrolase signature 90 103 1.8E-8 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_27410 0b15e195a1639bc7d1fc614f83530efd 289 PRINTS PR00412 Epoxide hydrolase signature 27 45 1.8E-8 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_27410 0b15e195a1639bc7d1fc614f83530efd 289 PRINTS PR00412 Epoxide hydrolase signature 104 117 1.8E-8 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_27410 0b15e195a1639bc7d1fc614f83530efd 289 PRINTS PR00412 Epoxide hydrolase signature 257 279 1.8E-8 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_27410 0b15e195a1639bc7d1fc614f83530efd 289 SUPERFAMILY SSF53474 11 283 6.2E-53 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_27410 0b15e195a1639bc7d1fc614f83530efd 289 PRINTS PR00111 Alpha/beta hydrolase fold signature 90 103 4.2E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_27410 0b15e195a1639bc7d1fc614f83530efd 289 PRINTS PR00111 Alpha/beta hydrolase fold signature 104 117 4.2E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_27410 0b15e195a1639bc7d1fc614f83530efd 289 PRINTS PR00111 Alpha/beta hydrolase fold signature 46 61 4.2E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_27410 0b15e195a1639bc7d1fc614f83530efd 289 Gene3D G3DSA:3.40.50.1820 2 283 4.2E-65 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_61510 92a962b6087b1e5fa4317c9477eeb59a 412 SUPERFAMILY SSF69864 172 404 8.37E-47 T 14-10-2018 AMIS_61510 92a962b6087b1e5fa4317c9477eeb59a 412 TIGRFAM TIGR00032 argG: argininosuccinate synthase 5 372 3.4E-84 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AMIS_61510 92a962b6087b1e5fa4317c9477eeb59a 412 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 9 17 - T 14-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AMIS_61510 92a962b6087b1e5fa4317c9477eeb59a 412 Gene3D G3DSA:3.90.1260.10 65 360 1.6E-104 T 14-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AMIS_61510 92a962b6087b1e5fa4317c9477eeb59a 412 Pfam PF00764 Arginosuccinate synthase 7 372 4.6E-82 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AMIS_61510 92a962b6087b1e5fa4317c9477eeb59a 412 Gene3D G3DSA:3.40.50.620 6 172 1.6E-104 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMIS_61510 92a962b6087b1e5fa4317c9477eeb59a 412 SUPERFAMILY SSF52402 3 203 1.35E-35 T 14-10-2018 AMIS_44040 dc34e73340b61db1a92407337e645b23 167 SUPERFAMILY SSF46785 24 164 1.43E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_44040 dc34e73340b61db1a92407337e645b23 167 Pfam PF12802 MarR family 53 113 6.7E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_44040 dc34e73340b61db1a92407337e645b23 167 Gene3D G3DSA:1.10.10.10 23 166 6.5E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_44040 dc34e73340b61db1a92407337e645b23 167 SMART SM00347 47 149 6.4E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_76460 278dcd55312cf545b9a5b7668eec81a6 433 SUPERFAMILY SSF117143 93 393 2.22E-55 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like AMIS_76460 278dcd55312cf545b9a5b7668eec81a6 433 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site AMIS_76460 278dcd55312cf545b9a5b7668eec81a6 433 Gene3D G3DSA:2.60.98.20 164 285 5.0E-7 T 14-10-2018 IPR037058 Flagellar hook protein FlgE superfamily AMIS_76460 278dcd55312cf545b9a5b7668eec81a6 433 Pfam PF00460 Flagella basal body rod protein 5 35 1.9E-11 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AMIS_76460 278dcd55312cf545b9a5b7668eec81a6 433 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 414 1.3E-87 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G AMIS_76460 278dcd55312cf545b9a5b7668eec81a6 433 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 353 431 7.1E-22 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AMIS_76460 278dcd55312cf545b9a5b7668eec81a6 433 Pfam PF07559 Flagellar basal body protein FlaE 203 275 8.4E-6 T 14-10-2018 IPR011491 Flagellar hook protein FlgE AMIS_49740 f6471be7e21f141844883403b9061a59 414 Pfam PF03734 L,D-transpeptidase catalytic domain 254 388 1.5E-13 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 AMIS_49740 f6471be7e21f141844883403b9061a59 414 Gene3D G3DSA:2.40.440.10 250 402 2.4E-83 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like AMIS_49740 f6471be7e21f141844883403b9061a59 414 Gene3D G3DSA:2.60.40.3780 49 144 1.9E-20 T 14-10-2018 AMIS_49740 f6471be7e21f141844883403b9061a59 414 Gene3D G3DSA:2.60.40.3710 159 411 2.4E-83 T 14-10-2018 AMIS_49740 f6471be7e21f141844883403b9061a59 414 SUPERFAMILY SSF141523 255 388 1.31E-20 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like AMIS_51810 20af40c5a493bcb81198206303faab42 181 SMART SM00422 19 91 4.2E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_51810 20af40c5a493bcb81198206303faab42 181 Gene3D G3DSA:1.10.1660.10 19 91 2.4E-13 T 14-10-2018 AMIS_51810 20af40c5a493bcb81198206303faab42 181 SUPERFAMILY SSF46955 24 107 2.2E-14 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily AMIS_51810 20af40c5a493bcb81198206303faab42 181 Pfam PF13411 MerR HTH family regulatory protein 23 89 2.5E-14 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_47000 2bd7d985f36b4815e34f3364a365fb7a 374 SUPERFAMILY SSF46785 3 60 4.54E-8 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_47000 2bd7d985f36b4815e34f3364a365fb7a 374 PIRSF PIRSF016838 70 176 1.7E-5 T 14-10-2018 IPR028349 Protein PafC AMIS_47000 2bd7d985f36b4815e34f3364a365fb7a 374 PIRSF PIRSF016838 212 369 3.3E-12 T 14-10-2018 IPR028349 Protein PafC AMIS_47000 2bd7d985f36b4815e34f3364a365fb7a 374 PIRSF PIRSF016838 2 55 0.31 T 14-10-2018 IPR028349 Protein PafC AMIS_47000 2bd7d985f36b4815e34f3364a365fb7a 374 Pfam PF08279 HTH domain 10 62 1.1E-9 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 AMIS_47000 2bd7d985f36b4815e34f3364a365fb7a 374 Gene3D G3DSA:1.10.10.10 1 70 3.5E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_47000 2bd7d985f36b4815e34f3364a365fb7a 374 Pfam PF13280 WYL domain 145 360 3.9E-33 T 14-10-2018 IPR026881 WYL domain AMIS_32290 5d7c9abf903fcd69f568a1a098f49d23 816 SUPERFAMILY SSF52540 16 446 3.3E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_32290 5d7c9abf903fcd69f568a1a098f49d23 816 Gene3D G3DSA:1.10.8.280 159 281 7.0E-134 T 14-10-2018 AMIS_32290 5d7c9abf903fcd69f568a1a098f49d23 816 ProSitePatterns PS00211 ABC transporters family signature. 704 718 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_32290 5d7c9abf903fcd69f568a1a098f49d23 816 Gene3D G3DSA:3.40.50.300 494 811 3.6E-106 T 14-10-2018 AMIS_32290 5d7c9abf903fcd69f568a1a098f49d23 816 SUPERFAMILY SSF52540 505 789 1.31E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_32290 5d7c9abf903fcd69f568a1a098f49d23 816 Pfam PF00005 ABC transporter 505 736 1.3E-5 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_32290 5d7c9abf903fcd69f568a1a098f49d23 816 Gene3D G3DSA:3.40.50.300 15 467 7.0E-134 T 14-10-2018 AMIS_32290 5d7c9abf903fcd69f568a1a098f49d23 816 Gene3D G3DSA:1.20.1580.10 566 704 3.6E-106 T 14-10-2018 AMIS_32290 5d7c9abf903fcd69f568a1a098f49d23 816 ProSitePatterns PS00211 ABC transporters family signature. 366 380 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_32290 5d7c9abf903fcd69f568a1a098f49d23 816 Gene3D G3DSA:1.20.1580.10 101 366 7.0E-134 T 14-10-2018 AMIS_64130 18ef9adafd3c5853109dae26be70cdbd 217 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 3.4E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMIS_64130 18ef9adafd3c5853109dae26be70cdbd 217 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 128 144 3.4E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMIS_64130 18ef9adafd3c5853109dae26be70cdbd 217 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 97 110 3.4E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMIS_64130 18ef9adafd3c5853109dae26be70cdbd 217 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 166 3.4E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMIS_64130 18ef9adafd3c5853109dae26be70cdbd 217 SUPERFAMILY SSF56784 3 211 1.12E-50 T 14-10-2018 IPR036412 HAD-like superfamily AMIS_64130 18ef9adafd3c5853109dae26be70cdbd 217 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 184 1.5E-28 T 14-10-2018 AMIS_64130 18ef9adafd3c5853109dae26be70cdbd 217 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 79 184 7.3E-16 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMIS_64130 18ef9adafd3c5853109dae26be70cdbd 217 Gene3D G3DSA:3.40.50.1000 6 187 1.3E-50 T 14-10-2018 IPR023214 HAD superfamily AMIS_64130 18ef9adafd3c5853109dae26be70cdbd 217 Gene3D G3DSA:1.10.150.240 16 85 1.3E-50 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AMIS_32160 c196990a988389a894e3d6d3d803c5a8 225 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 183 6.7E-19 T 14-10-2018 AMIS_32160 c196990a988389a894e3d6d3d803c5a8 225 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 82 183 7.2E-17 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMIS_32160 c196990a988389a894e3d6d3d803c5a8 225 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 13 165 2.6E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMIS_32160 c196990a988389a894e3d6d3d803c5a8 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 10 21 6.7E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMIS_32160 c196990a988389a894e3d6d3d803c5a8 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 127 143 6.7E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMIS_32160 c196990a988389a894e3d6d3d803c5a8 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 145 165 6.7E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMIS_32160 c196990a988389a894e3d6d3d803c5a8 225 Gene3D G3DSA:3.40.50.1000 11 185 1.4E-47 T 14-10-2018 IPR023214 HAD superfamily AMIS_32160 c196990a988389a894e3d6d3d803c5a8 225 Gene3D G3DSA:1.10.150.240 25 84 1.4E-47 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AMIS_32160 c196990a988389a894e3d6d3d803c5a8 225 SUPERFAMILY SSF56784 12 202 2.25E-40 T 14-10-2018 IPR036412 HAD-like superfamily AMIS_72250 921ce5362e45a1f22d1485fbe9c9e710 431 Pfam PF01842 ACT domain 355 416 2.6E-10 T 14-10-2018 IPR002912 ACT domain AMIS_72250 921ce5362e45a1f22d1485fbe9c9e710 431 Gene3D G3DSA:3.30.360.10 141 347 1.9E-143 T 14-10-2018 AMIS_72250 921ce5362e45a1f22d1485fbe9c9e710 431 SUPERFAMILY SSF51735 5 163 2.9E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_72250 921ce5362e45a1f22d1485fbe9c9e710 431 SUPERFAMILY SSF55021 350 422 1.05E-11 T 14-10-2018 AMIS_72250 921ce5362e45a1f22d1485fbe9c9e710 431 Gene3D G3DSA:3.40.50.720 8 339 1.9E-143 T 14-10-2018 AMIS_72250 921ce5362e45a1f22d1485fbe9c9e710 431 Gene3D G3DSA:3.30.70.260 348 419 1.9E-143 T 14-10-2018 AMIS_72250 921ce5362e45a1f22d1485fbe9c9e710 431 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 14 134 3.1E-21 T 14-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 AMIS_72250 921ce5362e45a1f22d1485fbe9c9e710 431 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 188 210 - T 14-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AMIS_72250 921ce5362e45a1f22d1485fbe9c9e710 431 SUPERFAMILY SSF55347 142 307 6.34E-52 T 14-10-2018 AMIS_72250 921ce5362e45a1f22d1485fbe9c9e710 431 Pfam PF00742 Homoserine dehydrogenase 142 320 7.0E-65 T 14-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AMIS_72250 921ce5362e45a1f22d1485fbe9c9e710 431 PIRSF PIRSF000098 5 431 5.1E-154 T 14-10-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AMIS_62410 df27d797cf97c0f1002b5493e5f64ccf 162 Gene3D G3DSA:3.20.80.10 1 162 4.4E-34 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily AMIS_62410 df27d797cf97c0f1002b5493e5f64ccf 162 Pfam PF06445 GyrI-like small molecule binding domain 2 122 6.1E-9 T 14-10-2018 IPR029442 GyrI-like small molecule binding domain AMIS_62410 df27d797cf97c0f1002b5493e5f64ccf 162 SUPERFAMILY SSF55136 2 122 3.84E-11 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily AMIS_62410 df27d797cf97c0f1002b5493e5f64ccf 162 SMART SM00871 1 156 3.8E-4 T 14-10-2018 IPR010499 Bacterial transcription activator, effector binding AMIS_43520 58fe6f4983d5bcef3552c9dc056a6a3c 307 Pfam PF01636 Phosphotransferase enzyme family 23 249 1.9E-21 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase AMIS_43520 58fe6f4983d5bcef3552c9dc056a6a3c 307 Gene3D G3DSA:3.90.1200.10 84 288 8.3E-12 T 14-10-2018 AMIS_43520 58fe6f4983d5bcef3552c9dc056a6a3c 307 SUPERFAMILY SSF56112 15 255 7.38E-27 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMIS_250 2028cf6ed87781f2b2cf9ebff34176a3 442 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 287 294 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMIS_250 2028cf6ed87781f2b2cf9ebff34176a3 442 SMART SM00878 334 439 1.5E-50 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AMIS_250 2028cf6ed87781f2b2cf9ebff34176a3 442 Pfam PF02785 Biotin carboxylase C-terminal domain 334 439 4.5E-34 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AMIS_250 2028cf6ed87781f2b2cf9ebff34176a3 442 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 2.0E-43 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AMIS_250 2028cf6ed87781f2b2cf9ebff34176a3 442 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 320 1.9E-68 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMIS_250 2028cf6ed87781f2b2cf9ebff34176a3 442 SUPERFAMILY SSF51246 329 440 2.93E-36 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AMIS_250 2028cf6ed87781f2b2cf9ebff34176a3 442 SUPERFAMILY SSF56059 83 322 1.01E-63 T 14-10-2018 AMIS_250 2028cf6ed87781f2b2cf9ebff34176a3 442 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMIS_250 2028cf6ed87781f2b2cf9ebff34176a3 442 Gene3D G3DSA:3.30.470.130 1 442 1.2E-180 T 14-10-2018 AMIS_250 2028cf6ed87781f2b2cf9ebff34176a3 442 SUPERFAMILY SSF52440 1 113 4.32E-45 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AMIS_27640 213c59c40d4e2bb322e10f81adefccbc 142 SUPERFAMILY SSF46785 6 139 1.71E-31 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_27640 213c59c40d4e2bb322e10f81adefccbc 142 Pfam PF12802 MarR family 29 88 5.8E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_27640 213c59c40d4e2bb322e10f81adefccbc 142 SMART SM00347 24 124 1.2E-24 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_27640 213c59c40d4e2bb322e10f81adefccbc 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 8.2E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_27640 213c59c40d4e2bb322e10f81adefccbc 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 8.2E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_27640 213c59c40d4e2bb322e10f81adefccbc 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 8.2E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_27640 213c59c40d4e2bb322e10f81adefccbc 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 8.2E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_27640 213c59c40d4e2bb322e10f81adefccbc 142 Gene3D G3DSA:1.10.10.10 2 140 1.7E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_21630 ba6a1a490030376cb580d242c7a885e5 287 Gene3D G3DSA:3.20.20.30 1 287 8.6E-63 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_21630 ba6a1a490030376cb580d242c7a885e5 287 SUPERFAMILY SSF51679 11 285 7.85E-53 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_21630 ba6a1a490030376cb580d242c7a885e5 287 TIGRFAM TIGR03619 F420_Rv2161c: probable F420-dependent oxidoreductase, Rv2161c family 17 256 1.6E-59 T 14-10-2018 IPR019921 Luciferase-like, F420-dependent oxidoreductase, Rv2161c, predicted AMIS_21630 ba6a1a490030376cb580d242c7a885e5 287 Pfam PF00296 Luciferase-like monooxygenase 11 231 2.0E-46 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMIS_70160 3383a44c1e8198446ad783ef09aa789d 380 SUPERFAMILY SSF53383 4 377 3.23E-60 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_70160 3383a44c1e8198446ad783ef09aa789d 380 Pfam PF00266 Aminotransferase class-V 48 285 1.1E-22 T 14-10-2018 IPR000192 Aminotransferase class V domain AMIS_70160 3383a44c1e8198446ad783ef09aa789d 380 Gene3D G3DSA:3.90.1150.10 8 363 1.8E-59 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMIS_70160 3383a44c1e8198446ad783ef09aa789d 380 Gene3D G3DSA:3.40.640.10 20 271 1.8E-59 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_63670 9e63f36cbbc9ff6b86760d60f043e363 315 Gene3D G3DSA:2.60.120.10 38 299 3.1E-83 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMIS_63670 9e63f36cbbc9ff6b86760d60f043e363 315 Pfam PF02678 Pirin 43 147 1.3E-28 T 14-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 AMIS_63670 9e63f36cbbc9ff6b86760d60f043e363 315 Pfam PF05726 Pirin C-terminal cupin domain 203 303 9.3E-30 T 14-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 AMIS_63670 9e63f36cbbc9ff6b86760d60f043e363 315 Gene3D G3DSA:2.60.120.10 169 273 3.1E-83 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMIS_63670 9e63f36cbbc9ff6b86760d60f043e363 315 SUPERFAMILY SSF51182 25 309 4.93E-79 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily AMIS_63670 9e63f36cbbc9ff6b86760d60f043e363 315 PIRSF PIRSF006232 23 311 1.9E-87 T 14-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 AMIS_30040 5bc6b068d9acef6d4ab731e504b3a01b 189 SMART SM00909 78 167 7.5E-7 T 14-10-2018 IPR019606 GerMN domain AMIS_30040 5bc6b068d9acef6d4ab731e504b3a01b 189 Pfam PF10646 Sporulation and spore germination 74 163 5.5E-7 T 14-10-2018 IPR019606 GerMN domain AMIS_42280 d401ae2ae804f7682cb47433eed60a11 154 Pfam PF01814 Hemerythrin HHE cation binding domain 12 129 9.5E-18 T 14-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 AMIS_42280 d401ae2ae804f7682cb47433eed60a11 154 Gene3D G3DSA:1.20.120.520 7 148 2.5E-17 T 14-10-2018 AMIS_50090 9a8bc9066926b14e71ca2add37aa0c42 331 Gene3D G3DSA:3.90.15.10 113 238 1.2E-69 T 14-10-2018 IPR014711 DNA topoisomerase I, catalytic core, alpha-helical subdomain, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 AMIS_50090 9a8bc9066926b14e71ca2add37aa0c42 331 SUPERFAMILY SSF55869 21 83 3.92E-21 T 14-10-2018 IPR035447 DNA topoisomerase I, N-terminal AMIS_50090 9a8bc9066926b14e71ca2add37aa0c42 331 Gene3D G3DSA:3.30.66.10 4 89 1.3E-33 T 14-10-2018 IPR035447 DNA topoisomerase I, N-terminal AMIS_50090 9a8bc9066926b14e71ca2add37aa0c42 331 Pfam PF01028 Eukaryotic DNA topoisomerase I, catalytic core 82 292 5.0E-31 T 14-10-2018 IPR013500 DNA topoisomerase I, catalytic core, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 AMIS_50090 9a8bc9066926b14e71ca2add37aa0c42 331 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 288 299 4.0E-7 T 14-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 AMIS_50090 9a8bc9066926b14e71ca2add37aa0c42 331 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 237 251 4.0E-7 T 14-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 AMIS_50090 9a8bc9066926b14e71ca2add37aa0c42 331 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 123 142 4.0E-7 T 14-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 AMIS_50090 9a8bc9066926b14e71ca2add37aa0c42 331 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 169 185 4.0E-7 T 14-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 AMIS_50090 9a8bc9066926b14e71ca2add37aa0c42 331 Gene3D G3DSA:1.10.132.120 90 319 1.2E-69 T 14-10-2018 AMIS_50090 9a8bc9066926b14e71ca2add37aa0c42 331 SUPERFAMILY SSF56349 78 307 2.8E-58 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMIS_33690 33b88d0b5401d909483ee597e65ac61c 484 SUPERFAMILY SSF52777 255 481 2.18E-60 T 14-10-2018 AMIS_33690 33b88d0b5401d909483ee597e65ac61c 484 SUPERFAMILY SSF51230 3 90 7.46E-24 T 14-10-2018 IPR011053 Single hybrid motif AMIS_33690 33b88d0b5401d909483ee597e65ac61c 484 SUPERFAMILY SSF47005 187 229 1.96E-11 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 AMIS_33690 33b88d0b5401d909483ee597e65ac61c 484 Pfam PF02817 e3 binding domain 193 227 1.1E-15 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 AMIS_33690 33b88d0b5401d909483ee597e65ac61c 484 Gene3D G3DSA:3.30.559.10 251 482 3.4E-62 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AMIS_33690 33b88d0b5401d909483ee597e65ac61c 484 Pfam PF00364 Biotin-requiring enzyme 3 74 2.5E-19 T 14-10-2018 IPR000089 Biotin/lipoyl attachment AMIS_33690 33b88d0b5401d909483ee597e65ac61c 484 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 266 481 9.1E-58 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 AMIS_33690 33b88d0b5401d909483ee597e65ac61c 484 Gene3D G3DSA:4.10.320.10 192 230 4.1E-16 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 AMIS_33690 33b88d0b5401d909483ee597e65ac61c 484 Gene3D G3DSA:2.40.50.100 1 102 1.2E-22 T 14-10-2018 AMIS_46150 94d3b02e471a9c421253761196e48069 315 Gene3D G3DSA:3.40.50.1820 2 290 1.1E-49 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_46150 94d3b02e471a9c421253761196e48069 315 Pfam PF00561 alpha/beta hydrolase fold 31 278 1.1E-14 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_46150 94d3b02e471a9c421253761196e48069 315 SUPERFAMILY SSF53474 6 291 1.5E-40 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_35050 dd759f9ea36b6a765c8f4adeff4346c9 340 SMART SM00354 1 71 9.1E-28 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_35050 dd759f9ea36b6a765c8f4adeff4346c9 340 Gene3D G3DSA:3.40.50.2300 161 292 4.3E-52 T 14-10-2018 AMIS_35050 dd759f9ea36b6a765c8f4adeff4346c9 340 Pfam PF13377 Periplasmic binding protein-like domain 169 332 4.9E-24 T 14-10-2018 AMIS_35050 dd759f9ea36b6a765c8f4adeff4346c9 340 SUPERFAMILY SSF47413 2 59 3.49E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_35050 dd759f9ea36b6a765c8f4adeff4346c9 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.1E-17 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_35050 dd759f9ea36b6a765c8f4adeff4346c9 340 Gene3D G3DSA:1.10.260.40 1 59 1.9E-22 T 14-10-2018 AMIS_35050 dd759f9ea36b6a765c8f4adeff4346c9 340 SUPERFAMILY SSF53822 58 318 4.28E-42 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_35050 dd759f9ea36b6a765c8f4adeff4346c9 340 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 AMIS_35050 dd759f9ea36b6a765c8f4adeff4346c9 340 Gene3D G3DSA:3.40.50.2300 79 311 4.3E-52 T 14-10-2018 AMIS_55810 40559999b083468705b585dd84815ffe 163 SUPERFAMILY SSF50800 23 154 1.46E-17 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily AMIS_79050 47f0ce813d77fe3513f92a947d6e0103 211 PIRSF PIRSF016661 23 204 5.1E-39 T 14-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 AMIS_79050 47f0ce813d77fe3513f92a947d6e0103 211 Gene3D G3DSA:1.10.1760.20 25 198 2.1E-44 T 14-10-2018 AMIS_79050 47f0ce813d77fe3513f92a947d6e0103 211 Pfam PF02632 BioY family 58 196 3.2E-33 T 14-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 AMIS_27330 d7c17ee3662139565e0f82a5c137cb1f 414 Gene3D G3DSA:1.10.630.10 4 414 8.5E-95 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_27330 d7c17ee3662139565e0f82a5c137cb1f 414 Pfam PF00067 Cytochrome P450 8 398 3.3E-61 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_27330 d7c17ee3662139565e0f82a5c137cb1f 414 PRINTS PR00385 P450 superfamily signature 279 290 7.8E-14 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_27330 d7c17ee3662139565e0f82a5c137cb1f 414 PRINTS PR00385 P450 superfamily signature 352 361 7.8E-14 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_27330 d7c17ee3662139565e0f82a5c137cb1f 414 PRINTS PR00385 P450 superfamily signature 361 372 7.8E-14 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_27330 d7c17ee3662139565e0f82a5c137cb1f 414 PRINTS PR00385 P450 superfamily signature 239 256 7.8E-14 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_27330 d7c17ee3662139565e0f82a5c137cb1f 414 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 354 363 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 AMIS_27330 d7c17ee3662139565e0f82a5c137cb1f 414 PRINTS PR00463 E-class P450 group I signature 361 384 1.7E-19 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_27330 d7c17ee3662139565e0f82a5c137cb1f 414 PRINTS PR00463 E-class P450 group I signature 228 245 1.7E-19 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_27330 d7c17ee3662139565e0f82a5c137cb1f 414 PRINTS PR00463 E-class P450 group I signature 351 361 1.7E-19 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_27330 d7c17ee3662139565e0f82a5c137cb1f 414 PRINTS PR00463 E-class P450 group I signature 318 342 1.7E-19 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_27330 d7c17ee3662139565e0f82a5c137cb1f 414 PRINTS PR00463 E-class P450 group I signature 15 34 1.7E-19 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_27330 d7c17ee3662139565e0f82a5c137cb1f 414 PRINTS PR00463 E-class P450 group I signature 278 296 1.7E-19 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_27330 d7c17ee3662139565e0f82a5c137cb1f 414 SUPERFAMILY SSF48264 7 414 1.57E-91 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_50890 0ce2eb7a007ffd10a0e75d52bd5d10fa 132 SUPERFAMILY SSF55620 2 129 7.23E-27 T 14-10-2018 AMIS_50890 0ce2eb7a007ffd10a0e75d52bd5d10fa 132 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 4 130 3.8E-21 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 AMIS_50890 0ce2eb7a007ffd10a0e75d52bd5d10fa 132 Gene3D G3DSA:3.30.479.10 1 132 1.1E-25 T 14-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 AMIS_6030 685ac459c07cc39eda286e118fc6e20f 216 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 5 210 39.454 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_6030 685ac459c07cc39eda286e118fc6e20f 216 ProSitePatterns PS00474 Ribosomal protein L3 signature. 104 127 - T 14-10-2018 IPR019926 Ribosomal protein L3, conserved site AMIS_6030 685ac459c07cc39eda286e118fc6e20f 216 Gene3D G3DSA:2.40.30.10 124 213 8.9E-19 T 14-10-2018 AMIS_6030 685ac459c07cc39eda286e118fc6e20f 216 Gene3D G3DSA:2.40.50.620 34 98 7.0E-19 T 14-10-2018 AMIS_6030 685ac459c07cc39eda286e118fc6e20f 216 SUPERFAMILY SSF50447 4 213 2.03E-81 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AMIS_6030 685ac459c07cc39eda286e118fc6e20f 216 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 7 207 6.2E-89 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_6030 685ac459c07cc39eda286e118fc6e20f 216 Pfam PF00297 Ribosomal protein L3 101 185 4.2E-16 T 14-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_40790 83b9c7d74a2e2bd4bcd0989d3d0480a6 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 59 5.2E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_40790 83b9c7d74a2e2bd4bcd0989d3d0480a6 200 SUPERFAMILY SSF46689 2 80 3.95E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_40790 83b9c7d74a2e2bd4bcd0989d3d0480a6 200 SUPERFAMILY SSF48498 83 198 2.14E-14 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_40790 83b9c7d74a2e2bd4bcd0989d3d0480a6 200 Gene3D G3DSA:1.10.357.10 1 197 4.5E-48 T 14-10-2018 AMIS_40790 83b9c7d74a2e2bd4bcd0989d3d0480a6 200 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 85 198 5.2E-14 T 14-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal AMIS_21650 8affc46bded7723e8b4405ad7c1f6088 371 SUPERFAMILY SSF56645 4 236 4.58E-55 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMIS_21650 8affc46bded7723e8b4405ad7c1f6088 371 Gene3D G3DSA:1.10.540.10 2 113 1.3E-19 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMIS_21650 8affc46bded7723e8b4405ad7c1f6088 371 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 223 364 1.3E-28 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMIS_21650 8affc46bded7723e8b4405ad7c1f6088 371 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 119 202 1.2E-20 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMIS_21650 8affc46bded7723e8b4405ad7c1f6088 371 SUPERFAMILY SSF47203 223 368 8.7E-20 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMIS_21650 8affc46bded7723e8b4405ad7c1f6088 371 Gene3D G3DSA:2.40.110.10 118 226 5.5E-35 T 14-10-2018 AMIS_21650 8affc46bded7723e8b4405ad7c1f6088 371 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 114 1.7E-9 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMIS_21650 8affc46bded7723e8b4405ad7c1f6088 371 Gene3D G3DSA:1.20.140.10 227 370 7.9E-32 T 14-10-2018 AMIS_33200 99cf39205a63a31f69cd254acb6693f4 298 SUPERFAMILY SSF52402 16 155 8.2E-28 T 14-10-2018 AMIS_33200 99cf39205a63a31f69cd254acb6693f4 298 SUPERFAMILY SSF52402 159 296 2.43E-24 T 14-10-2018 AMIS_33200 99cf39205a63a31f69cd254acb6693f4 298 PRINTS PR01438 Universal stress protein signature 274 296 5.3E-14 T 14-10-2018 IPR006015 Universal stress protein A AMIS_33200 99cf39205a63a31f69cd254acb6693f4 298 PRINTS PR01438 Universal stress protein signature 13 31 5.3E-14 T 14-10-2018 IPR006015 Universal stress protein A AMIS_33200 99cf39205a63a31f69cd254acb6693f4 298 PRINTS PR01438 Universal stress protein signature 256 268 5.3E-14 T 14-10-2018 IPR006015 Universal stress protein A AMIS_33200 99cf39205a63a31f69cd254acb6693f4 298 Gene3D G3DSA:3.40.50.620 153 298 7.0E-38 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMIS_33200 99cf39205a63a31f69cd254acb6693f4 298 Gene3D G3DSA:3.40.50.620 5 152 1.9E-36 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMIS_33200 99cf39205a63a31f69cd254acb6693f4 298 Pfam PF00582 Universal stress protein family 16 150 4.9E-25 T 14-10-2018 IPR006016 UspA AMIS_33200 99cf39205a63a31f69cd254acb6693f4 298 Pfam PF00582 Universal stress protein family 160 296 2.3E-19 T 14-10-2018 IPR006016 UspA AMIS_71360 6a595435e34fd32fa03c7530ba982f13 489 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 14 482 89.255 T 14-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMIS_71360 6a595435e34fd32fa03c7530ba982f13 489 Gene3D G3DSA:3.90.1300.10 6 486 1.5E-183 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMIS_71360 6a595435e34fd32fa03c7530ba982f13 489 Pfam PF01425 Amidase 27 469 1.6E-150 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMIS_71360 6a595435e34fd32fa03c7530ba982f13 489 ProSitePatterns PS00571 Amidases signature. 151 182 - T 14-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 AMIS_71360 6a595435e34fd32fa03c7530ba982f13 489 SUPERFAMILY SSF75304 2 481 1.83E-159 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMIS_71360 6a595435e34fd32fa03c7530ba982f13 489 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 16 481 6.0E-182 T 14-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMIS_27670 860fa034536b6ba3cdcf4a7d85583e54 1209 Pfam PF00069 Protein kinase domain 5 261 6.8E-27 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMIS_27670 860fa034536b6ba3cdcf4a7d85583e54 1209 SMART SM00320 509 547 5.6 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_27670 860fa034536b6ba3cdcf4a7d85583e54 1209 SMART SM00320 685 724 47.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_27670 860fa034536b6ba3cdcf4a7d85583e54 1209 SMART SM00320 869 908 0.56 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_27670 860fa034536b6ba3cdcf4a7d85583e54 1209 SMART SM00320 911 950 0.0077 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_27670 860fa034536b6ba3cdcf4a7d85583e54 1209 SMART SM00320 1036 1075 5.7E-6 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_27670 860fa034536b6ba3cdcf4a7d85583e54 1209 SMART SM00320 1078 1153 98.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_27670 860fa034536b6ba3cdcf4a7d85583e54 1209 Gene3D G3DSA:2.130.10.10 835 1003 1.2E-23 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_27670 860fa034536b6ba3cdcf4a7d85583e54 1209 Gene3D G3DSA:2.130.10.10 1004 1205 3.8E-22 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_27670 860fa034536b6ba3cdcf4a7d85583e54 1209 SUPERFAMILY SSF50998 845 1160 3.92E-49 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AMIS_27670 860fa034536b6ba3cdcf4a7d85583e54 1209 SUPERFAMILY SSF48452 296 402 4.59E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_27670 860fa034536b6ba3cdcf4a7d85583e54 1209 Gene3D G3DSA:3.30.200.20 1 85 2.4E-10 T 14-10-2018 AMIS_27670 860fa034536b6ba3cdcf4a7d85583e54 1209 Gene3D G3DSA:2.130.10.10 571 743 5.8E-10 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_27670 860fa034536b6ba3cdcf4a7d85583e54 1209 Gene3D G3DSA:1.25.40.10 289 416 1.7E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_27670 860fa034536b6ba3cdcf4a7d85583e54 1209 Gene3D G3DSA:2.130.10.10 478 570 9.6E-10 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_27670 860fa034536b6ba3cdcf4a7d85583e54 1209 SMART SM00220 5 273 1.5E-22 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMIS_27670 860fa034536b6ba3cdcf4a7d85583e54 1209 Pfam PF00400 WD domain, G-beta repeat 1038 1075 0.034 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 AMIS_27670 860fa034536b6ba3cdcf4a7d85583e54 1209 Gene3D G3DSA:1.10.510.10 89 288 8.1E-35 T 14-10-2018 AMIS_27670 860fa034536b6ba3cdcf4a7d85583e54 1209 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 131 143 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 AMIS_27670 860fa034536b6ba3cdcf4a7d85583e54 1209 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 1062 1076 - T 14-10-2018 IPR019775 WD40 repeat, conserved site AMIS_27670 860fa034536b6ba3cdcf4a7d85583e54 1209 SUPERFAMILY SSF56112 4 263 2.56E-50 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMIS_27670 860fa034536b6ba3cdcf4a7d85583e54 1209 SUPERFAMILY SSF50969 428 736 2.51E-26 T 14-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like AMIS_8010 a3d5a40afa0013d97de42fa94f93e3ab 419 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 28 316 1.5E-82 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AMIS_8010 a3d5a40afa0013d97de42fa94f93e3ab 419 TIGRFAM TIGR01127 ilvA_1Cterm: threonine ammonia-lyase 33 412 2.3E-137 T 14-10-2018 IPR005789 Threonine dehydratase, catabolic GO:0004794|GO:0006567 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AMIS_8010 a3d5a40afa0013d97de42fa94f93e3ab 419 SUPERFAMILY SSF55021 340 409 1.5E-6 T 14-10-2018 AMIS_8010 a3d5a40afa0013d97de42fa94f93e3ab 419 SUPERFAMILY SSF53686 15 323 9.17E-96 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMIS_8010 a3d5a40afa0013d97de42fa94f93e3ab 419 Gene3D G3DSA:3.40.50.1100 62 158 1.3E-114 T 14-10-2018 AMIS_8010 a3d5a40afa0013d97de42fa94f93e3ab 419 Gene3D G3DSA:3.40.50.1100 19 320 1.3E-114 T 14-10-2018 AMIS_8010 a3d5a40afa0013d97de42fa94f93e3ab 419 Pfam PF01842 ACT domain 341 392 1.7E-6 T 14-10-2018 IPR002912 ACT domain AMIS_61950 56a3ccda7cd4db3d0bfd239c589e663d 199 Gene3D G3DSA:2.40.30.20 1 89 1.2E-26 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMIS_61950 56a3ccda7cd4db3d0bfd239c589e663d 199 PIRSF PIRSF000498 1 198 1.2E-71 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AMIS_61950 56a3ccda7cd4db3d0bfd239c589e663d 199 Pfam PF00677 Lumazine binding domain 100 184 1.5E-24 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AMIS_61950 56a3ccda7cd4db3d0bfd239c589e663d 199 Pfam PF00677 Lumazine binding domain 3 87 5.2E-22 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AMIS_61950 56a3ccda7cd4db3d0bfd239c589e663d 199 Gene3D G3DSA:2.40.30.20 102 199 8.2E-35 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMIS_61950 56a3ccda7cd4db3d0bfd239c589e663d 199 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 195 1.1E-63 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AMIS_61950 56a3ccda7cd4db3d0bfd239c589e663d 199 SUPERFAMILY SSF63380 1 88 6.8E-23 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AMIS_61950 56a3ccda7cd4db3d0bfd239c589e663d 199 SUPERFAMILY SSF63380 93 195 2.72E-32 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AMIS_77050 519ecfae353a09b4a7cc6a59bc727b32 1840 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 374 419 5.8E-8 T 14-10-2018 IPR001434 Domain of unknown function DUF11 AMIS_77050 519ecfae353a09b4a7cc6a59bc727b32 1840 Pfam PF01345 Domain of unknown function DUF11 370 460 3.5E-8 T 14-10-2018 IPR001434 Domain of unknown function DUF11 AMIS_54020 afcb9dbaf8b12011cb823995180cef5b 867 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 353 365 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 AMIS_54020 afcb9dbaf8b12011cb823995180cef5b 867 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 624 642 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 AMIS_54020 afcb9dbaf8b12011cb823995180cef5b 867 Gene3D G3DSA:3.40.50.300 402 518 3.2E-38 T 14-10-2018 AMIS_54020 afcb9dbaf8b12011cb823995180cef5b 867 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 594 612 6.6E-41 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 AMIS_54020 afcb9dbaf8b12011cb823995180cef5b 867 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 668 686 6.6E-41 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 AMIS_54020 afcb9dbaf8b12011cb823995180cef5b 867 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 701 715 6.6E-41 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 AMIS_54020 afcb9dbaf8b12011cb823995180cef5b 867 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 639 657 6.6E-41 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 AMIS_54020 afcb9dbaf8b12011cb823995180cef5b 867 Gene3D G3DSA:1.10.1780.10 40 191 7.5E-17 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AMIS_54020 afcb9dbaf8b12011cb823995180cef5b 867 SMART SM00382 254 402 5.6E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_54020 afcb9dbaf8b12011cb823995180cef5b 867 SMART SM00382 590 755 8.0E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_54020 afcb9dbaf8b12011cb823995180cef5b 867 SMART SM01086 769 858 2.7E-35 T 14-10-2018 IPR019489 Clp ATPase, C-terminal AMIS_54020 afcb9dbaf8b12011cb823995180cef5b 867 Gene3D G3DSA:3.40.50.300 206 401 6.2E-68 T 14-10-2018 AMIS_54020 afcb9dbaf8b12011cb823995180cef5b 867 Pfam PF07724 AAA domain (Cdc48 subfamily) 589 763 1.0E-52 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMIS_54020 afcb9dbaf8b12011cb823995180cef5b 867 Gene3D G3DSA:1.10.8.60 769 866 1.4E-27 T 14-10-2018 AMIS_54020 afcb9dbaf8b12011cb823995180cef5b 867 SUPERFAMILY SSF52540 215 504 1.03E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_54020 afcb9dbaf8b12011cb823995180cef5b 867 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 259 393 3.6E-13 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMIS_54020 afcb9dbaf8b12011cb823995180cef5b 867 Pfam PF02151 UvrB/uvrC motif 475 510 1.2E-7 T 14-10-2018 IPR001943 UVR domain GO:0005515 AMIS_54020 afcb9dbaf8b12011cb823995180cef5b 867 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 72 107 0.0051 T 14-10-2018 IPR004176 Clp, N-terminal AMIS_54020 afcb9dbaf8b12011cb823995180cef5b 867 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 151 183 8.6E-4 T 14-10-2018 IPR004176 Clp, N-terminal AMIS_54020 afcb9dbaf8b12011cb823995180cef5b 867 SUPERFAMILY SSF81923 44 172 1.94E-9 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AMIS_54020 afcb9dbaf8b12011cb823995180cef5b 867 Gene3D G3DSA:3.40.50.300 521 767 1.9E-96 T 14-10-2018 AMIS_54020 afcb9dbaf8b12011cb823995180cef5b 867 SUPERFAMILY SSF52540 539 857 9.47E-80 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_54020 afcb9dbaf8b12011cb823995180cef5b 867 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 769 849 1.4E-24 T 14-10-2018 IPR019489 Clp ATPase, C-terminal AMIS_35960 3576e7e2cb1a4e8fedaa1173888b77f6 711 SUPERFAMILY SSF51445 27 351 1.37E-70 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_35960 3576e7e2cb1a4e8fedaa1173888b77f6 711 Pfam PF14310 Fibronectin type III-like domain 626 700 9.6E-18 T 14-10-2018 IPR026891 Fibronectin type III-like domain AMIS_35960 3576e7e2cb1a4e8fedaa1173888b77f6 711 Gene3D G3DSA:3.40.50.1700 338 426 2.3E-93 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 AMIS_35960 3576e7e2cb1a4e8fedaa1173888b77f6 711 Gene3D G3DSA:2.60.40.10 596 710 5.3E-27 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_35960 3576e7e2cb1a4e8fedaa1173888b77f6 711 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 81 315 9.2E-33 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMIS_35960 3576e7e2cb1a4e8fedaa1173888b77f6 711 Gene3D G3DSA:3.40.50.1700 437 540 8.2E-59 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 AMIS_35960 3576e7e2cb1a4e8fedaa1173888b77f6 711 Gene3D G3DSA:3.20.20.300 83 337 2.3E-93 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 AMIS_35960 3576e7e2cb1a4e8fedaa1173888b77f6 711 PRINTS PR00133 Glycosyl hydrolase family 3 signature 103 122 5.6E-18 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMIS_35960 3576e7e2cb1a4e8fedaa1173888b77f6 711 PRINTS PR00133 Glycosyl hydrolase family 3 signature 181 197 5.6E-18 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMIS_35960 3576e7e2cb1a4e8fedaa1173888b77f6 711 PRINTS PR00133 Glycosyl hydrolase family 3 signature 149 165 5.6E-18 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMIS_35960 3576e7e2cb1a4e8fedaa1173888b77f6 711 PRINTS PR00133 Glycosyl hydrolase family 3 signature 248 266 5.6E-18 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMIS_35960 3576e7e2cb1a4e8fedaa1173888b77f6 711 PRINTS PR00133 Glycosyl hydrolase family 3 signature 79 95 5.6E-18 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMIS_35960 3576e7e2cb1a4e8fedaa1173888b77f6 711 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 353 592 5.4E-53 T 14-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 AMIS_35960 3576e7e2cb1a4e8fedaa1173888b77f6 711 Gene3D G3DSA:3.20.20.300 543 595 8.2E-59 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 AMIS_35960 3576e7e2cb1a4e8fedaa1173888b77f6 711 SMART SM01217 626 701 1.5E-17 T 14-10-2018 IPR026891 Fibronectin type III-like domain AMIS_35960 3576e7e2cb1a4e8fedaa1173888b77f6 711 SUPERFAMILY SSF52279 353 595 5.49E-51 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 AMIS_59620 53611b899202b66dceff3e92f94a24c6 334 Gene3D G3DSA:3.40.190.10 125 324 1.2E-91 T 14-10-2018 AMIS_59620 53611b899202b66dceff3e92f94a24c6 334 Pfam PF13531 Bacterial extracellular solute-binding protein 32 289 1.4E-24 T 14-10-2018 AMIS_59620 53611b899202b66dceff3e92f94a24c6 334 Gene3D G3DSA:3.40.190.10 50 300 1.2E-91 T 14-10-2018 AMIS_59620 53611b899202b66dceff3e92f94a24c6 334 SUPERFAMILY SSF53850 28 299 2.89E-54 T 14-10-2018 AMIS_12510 98c70b445d75157f2d8b731263200c50 661 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 571 586 2.1E-46 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMIS_12510 98c70b445d75157f2d8b731263200c50 661 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 431 449 2.1E-46 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMIS_12510 98c70b445d75157f2d8b731263200c50 661 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 458 482 2.1E-46 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMIS_12510 98c70b445d75157f2d8b731263200c50 661 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 516 536 2.1E-46 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMIS_12510 98c70b445d75157f2d8b731263200c50 661 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 590 612 2.1E-46 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMIS_12510 98c70b445d75157f2d8b731263200c50 661 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 486 505 2.1E-46 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMIS_12510 98c70b445d75157f2d8b731263200c50 661 SUPERFAMILY SSF53474 406 656 5.74E-47 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_12510 98c70b445d75157f2d8b731263200c50 661 Gene3D G3DSA:3.40.50.1820 1 619 1.2E-124 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_12510 98c70b445d75157f2d8b731263200c50 661 SUPERFAMILY SSF50993 1 400 2.2E-44 T 14-10-2018 AMIS_12510 98c70b445d75157f2d8b731263200c50 661 Gene3D G3DSA:2.130.10.120 51 396 1.2E-124 T 14-10-2018 AMIS_12510 98c70b445d75157f2d8b731263200c50 661 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 1 382 3.7E-25 T 14-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 AMIS_12510 98c70b445d75157f2d8b731263200c50 661 Pfam PF00326 Prolyl oligopeptidase family 456 658 7.6E-50 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AMIS_23930 e68f4931d5f81a4f7a4e1d3f28620dbe 1029 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 201 211 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site AMIS_23930 e68f4931d5f81a4f7a4e1d3f28620dbe 1029 Pfam PF00082 Subtilase family 160 421 1.2E-56 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AMIS_23930 e68f4931d5f81a4f7a4e1d3f28620dbe 1029 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 165 176 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site AMIS_23930 e68f4931d5f81a4f7a4e1d3f28620dbe 1029 Gene3D G3DSA:3.40.50.200 135 432 8.4E-92 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AMIS_23930 e68f4931d5f81a4f7a4e1d3f28620dbe 1029 PRINTS PR00723 Subtilisin serine protease family (S8) signature 197 210 1.5E-21 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMIS_23930 e68f4931d5f81a4f7a4e1d3f28620dbe 1029 PRINTS PR00723 Subtilisin serine protease family (S8) signature 160 179 1.5E-21 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMIS_23930 e68f4931d5f81a4f7a4e1d3f28620dbe 1029 PRINTS PR00723 Subtilisin serine protease family (S8) signature 371 387 1.5E-21 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMIS_23930 e68f4931d5f81a4f7a4e1d3f28620dbe 1029 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 372 382 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site AMIS_23930 e68f4931d5f81a4f7a4e1d3f28620dbe 1029 SUPERFAMILY SSF52743 142 429 2.75E-78 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AMIS_80280 010a533b00432f986ebd2a4910b8f814 541 Gene3D G3DSA:1.20.1730.10 22 533 4.7E-43 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily AMIS_80280 010a533b00432f986ebd2a4910b8f814 541 Pfam PF00474 Sodium:solute symporter family 33 471 4.8E-41 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AMIS_18940 ced11f491062ed5900b6e78eb7332fbd 338 SUPERFAMILY SSF51126 21 334 3.62E-63 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor AMIS_18940 ced11f491062ed5900b6e78eb7332fbd 338 Pfam PF01095 Pectinesterase 23 324 1.5E-41 T 14-10-2018 IPR000070 Pectinesterase, catalytic GO:0005618|GO:0030599|GO:0042545 KEGG: 00040+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248 AMIS_18940 ced11f491062ed5900b6e78eb7332fbd 338 Gene3D G3DSA:2.160.20.10 6 308 4.0E-99 T 14-10-2018 IPR012334 Pectin lyase fold AMIS_18940 ced11f491062ed5900b6e78eb7332fbd 338 ProSitePatterns PS00503 Pectinesterase signature 2. 184 193 - T 14-10-2018 IPR033131 Pectinesterase, Asp active site KEGG: 00040+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248 AMIS_79770 f5dd2e5450e0c78828fd150b7c4db051 222 SUPERFAMILY SSF46894 140 218 5.1E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_79770 f5dd2e5450e0c78828fd150b7c4db051 222 Pfam PF00072 Response regulator receiver domain 8 119 1.4E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_79770 f5dd2e5450e0c78828fd150b7c4db051 222 Pfam PF00196 Bacterial regulatory proteins, luxR family 157 212 9.8E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_79770 f5dd2e5450e0c78828fd150b7c4db051 222 SUPERFAMILY SSF52172 4 138 4.55E-36 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_79770 f5dd2e5450e0c78828fd150b7c4db051 222 SMART SM00421 155 212 7.6E-23 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_79770 f5dd2e5450e0c78828fd150b7c4db051 222 Gene3D G3DSA:3.40.50.12740 6 218 2.6E-72 T 14-10-2018 AMIS_79770 f5dd2e5450e0c78828fd150b7c4db051 222 ProSitePatterns PS00622 LuxR-type HTH domain signature. 172 199 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_79770 f5dd2e5450e0c78828fd150b7c4db051 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 158 172 4.2E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_79770 f5dd2e5450e0c78828fd150b7c4db051 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 188 200 4.2E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_79770 f5dd2e5450e0c78828fd150b7c4db051 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 188 4.2E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_79770 f5dd2e5450e0c78828fd150b7c4db051 222 SMART SM00448 6 119 6.7E-34 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_73880 85b8781a623e7b203770d972b684f544 136 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 6 132 12.295 T 14-10-2018 IPR022907 VapC family GO:0004540 AMIS_73880 85b8781a623e7b203770d972b684f544 136 Pfam PF01850 PIN domain 7 126 2.1E-8 T 14-10-2018 IPR002716 PIN domain AMIS_73880 85b8781a623e7b203770d972b684f544 136 Gene3D G3DSA:3.40.50.1010 3 136 1.8E-34 T 14-10-2018 AMIS_73880 85b8781a623e7b203770d972b684f544 136 SUPERFAMILY SSF88723 7 127 7.85E-11 T 14-10-2018 IPR029060 PIN-like domain superfamily AMIS_43300 bd21e8d69978ebc265a87de2be7acd60 338 Gene3D G3DSA:1.10.3470.10 6 336 2.3E-87 T 14-10-2018 IPR037294 ABC transporter, BtuC-like AMIS_43300 bd21e8d69978ebc265a87de2be7acd60 338 SUPERFAMILY SSF81345 7 330 9.29E-75 T 14-10-2018 IPR037294 ABC transporter, BtuC-like AMIS_43300 bd21e8d69978ebc265a87de2be7acd60 338 Pfam PF01032 FecCD transport family 18 330 6.5E-83 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AMIS_79960 93065de0e56b1a8e4167fbdace685e2e 370 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 247 266 8.9E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMIS_79960 93065de0e56b1a8e4167fbdace685e2e 370 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 187 194 8.9E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMIS_79960 93065de0e56b1a8e4167fbdace685e2e 370 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 272 281 8.9E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AMIS_79960 93065de0e56b1a8e4167fbdace685e2e 370 Gene3D G3DSA:1.10.490.10 4 135 9.1E-38 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 AMIS_79960 93065de0e56b1a8e4167fbdace685e2e 370 SUPERFAMILY SSF52343 241 368 1.22E-28 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMIS_79960 93065de0e56b1a8e4167fbdace685e2e 370 Pfam PF00042 Globin 6 97 6.0E-14 T 14-10-2018 IPR000971 Globin GO:0020037 AMIS_79960 93065de0e56b1a8e4167fbdace685e2e 370 Gene3D G3DSA:3.40.50.80 238 370 4.4E-28 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMIS_79960 93065de0e56b1a8e4167fbdace685e2e 370 Pfam PF00970 Oxidoreductase FAD-binding domain 162 236 7.7E-14 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 AMIS_79960 93065de0e56b1a8e4167fbdace685e2e 370 PRINTS PR00410 Phenol hydroxylase reductase family signature 247 266 1.2E-14 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AMIS_79960 93065de0e56b1a8e4167fbdace685e2e 370 PRINTS PR00410 Phenol hydroxylase reductase family signature 272 281 1.2E-14 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AMIS_79960 93065de0e56b1a8e4167fbdace685e2e 370 PRINTS PR00410 Phenol hydroxylase reductase family signature 168 180 1.2E-14 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AMIS_79960 93065de0e56b1a8e4167fbdace685e2e 370 Pfam PF00175 Oxidoreductase NAD-binding domain 248 348 8.9E-13 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AMIS_79960 93065de0e56b1a8e4167fbdace685e2e 370 SUPERFAMILY SSF63380 141 237 4.26E-22 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AMIS_79960 93065de0e56b1a8e4167fbdace685e2e 370 SUPERFAMILY SSF46458 7 131 1.2E-33 T 14-10-2018 IPR009050 Globin-like superfamily AMIS_79960 93065de0e56b1a8e4167fbdace685e2e 370 Gene3D G3DSA:2.40.30.10 141 237 8.3E-23 T 14-10-2018 AMIS_24080 b9fc728b36c00202f5d02d1468ee7e4e 675 SUPERFAMILY SSF52129 4 223 2.09E-18 T 14-10-2018 IPR029030 Caspase-like domain superfamily AMIS_24080 b9fc728b36c00202f5d02d1468ee7e4e 675 Pfam PF00656 Caspase domain 4 220 7.2E-10 T 14-10-2018 AMIS_24080 b9fc728b36c00202f5d02d1468ee7e4e 675 PRINTS PR01217 Proline rich extensin signature 509 534 5.0E-9 T 14-10-2018 AMIS_24080 b9fc728b36c00202f5d02d1468ee7e4e 675 PRINTS PR01217 Proline rich extensin signature 327 343 5.0E-9 T 14-10-2018 AMIS_24080 b9fc728b36c00202f5d02d1468ee7e4e 675 PRINTS PR01217 Proline rich extensin signature 312 324 5.0E-9 T 14-10-2018 AMIS_24080 b9fc728b36c00202f5d02d1468ee7e4e 675 PRINTS PR01217 Proline rich extensin signature 348 360 5.0E-9 T 14-10-2018 AMIS_24080 b9fc728b36c00202f5d02d1468ee7e4e 675 ProSitePatterns PS00018 EF-hand calcium-binding domain. 200 212 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site AMIS_24080 b9fc728b36c00202f5d02d1468ee7e4e 675 Gene3D G3DSA:3.40.50.1460 1 207 8.7E-25 T 14-10-2018 AMIS_58090 3828055022a2eb644f91d90571bad952 369 SUPERFAMILY SSF53383 14 365 1.24E-97 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_58090 3828055022a2eb644f91d90571bad952 369 Gene3D G3DSA:3.90.1150.10 252 369 2.2E-31 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMIS_58090 3828055022a2eb644f91d90571bad952 369 Gene3D G3DSA:3.40.640.10 1 251 7.0E-88 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_58090 3828055022a2eb644f91d90571bad952 369 PIRSF PIRSF000390 1 369 1.1E-99 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AMIS_58090 3828055022a2eb644f91d90571bad952 369 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 17 363 4.8E-102 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AMIS_9290 6fa098c95dd26d9045201c9159854407 328 Gene3D G3DSA:1.50.10.10 134 316 1.5E-28 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 AMIS_9290 6fa098c95dd26d9045201c9159854407 328 Gene3D G3DSA:1.50.10.10 5 133 7.2E-12 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 AMIS_9290 6fa098c95dd26d9045201c9159854407 328 SUPERFAMILY SSF48208 29 317 5.67E-37 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AMIS_2700 8a63a8a4e3d3782fed6cd3063e756bbc 602 Gene3D G3DSA:3.40.50.300 360 500 6.4E-8 T 14-10-2018 AMIS_2700 8a63a8a4e3d3782fed6cd3063e756bbc 602 SUPERFAMILY SSF52540 3 470 7.77E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_2700 8a63a8a4e3d3782fed6cd3063e756bbc 602 Pfam PF13538 UvrD-like helicase C-terminal domain 416 468 3.9E-7 T 14-10-2018 IPR027785 UvrD-like helicase C-terminal domain AMIS_2700 8a63a8a4e3d3782fed6cd3063e756bbc 602 Pfam PF13245 AAA domain 16 248 3.7E-11 T 14-10-2018 AMIS_13250 4a5d0d6c75c1ce303e3a7a786e60af19 408 SUPERFAMILY SSF47413 6 69 2.95E-11 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_13250 4a5d0d6c75c1ce303e3a7a786e60af19 408 SMART SM00530 9 65 1.4E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMIS_13250 4a5d0d6c75c1ce303e3a7a786e60af19 408 Pfam PF13560 Helix-turn-helix domain 6 64 7.1E-10 T 14-10-2018 AMIS_13250 4a5d0d6c75c1ce303e3a7a786e60af19 408 Gene3D G3DSA:1.10.260.40 6 104 5.5E-12 T 14-10-2018 AMIS_35660 31a6a44cf2b04459b3b45634f0a2ff39 67 SUPERFAMILY SSF46785 1 62 9.54E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_35660 31a6a44cf2b04459b3b45634f0a2ff39 67 Gene3D G3DSA:1.10.10.10 1 66 1.8E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_35660 31a6a44cf2b04459b3b45634f0a2ff39 67 Pfam PF01638 HxlR-like helix-turn-helix 1 53 4.5E-13 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type AMIS_65540 cdbe14ec59e6453cc7658b44ab97bff8 209 SMART SM00421 148 205 1.2E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_65540 cdbe14ec59e6453cc7658b44ab97bff8 209 SMART SM00448 2 115 2.0E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_65540 cdbe14ec59e6453cc7658b44ab97bff8 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 1.4E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_65540 cdbe14ec59e6453cc7658b44ab97bff8 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 1.4E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_65540 cdbe14ec59e6453cc7658b44ab97bff8 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 1.4E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_65540 cdbe14ec59e6453cc7658b44ab97bff8 209 Gene3D G3DSA:3.40.50.12740 2 209 1.1E-66 T 14-10-2018 AMIS_65540 cdbe14ec59e6453cc7658b44ab97bff8 209 SUPERFAMILY SSF52172 1 133 3.7E-33 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_65540 cdbe14ec59e6453cc7658b44ab97bff8 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 205 3.5E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_65540 cdbe14ec59e6453cc7658b44ab97bff8 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_65540 cdbe14ec59e6453cc7658b44ab97bff8 209 Pfam PF00072 Response regulator receiver domain 4 115 2.0E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_65540 cdbe14ec59e6453cc7658b44ab97bff8 209 SUPERFAMILY SSF46894 137 207 1.22E-18 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_42700 57ea2a7a4c2497a61829c337d8359699 232 Gene3D G3DSA:3.40.50.1240 2 227 1.2E-23 T 14-10-2018 IPR029033 Histidine phosphatase superfamily AMIS_42700 57ea2a7a4c2497a61829c337d8359699 232 SUPERFAMILY SSF53254 3 223 1.63E-25 T 14-10-2018 IPR029033 Histidine phosphatase superfamily AMIS_42700 57ea2a7a4c2497a61829c337d8359699 232 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 202 1.1E-12 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AMIS_42700 57ea2a7a4c2497a61829c337d8359699 232 SMART SM00855 3 170 1.1E-7 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AMIS_62420 05b9f5c144b18acf429a5cbce0ffa444 600 SUPERFAMILY SSF55261 286 415 2.13E-32 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 AMIS_62420 05b9f5c144b18acf429a5cbce0ffa444 600 Pfam PF02938 GAD domain 305 397 4.6E-15 T 14-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 AMIS_62420 05b9f5c144b18acf429a5cbce0ffa444 600 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 2 579 31.882 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 AMIS_62420 05b9f5c144b18acf429a5cbce0ffa444 600 PRINTS PR01042 Aspartyl-tRNA synthetase signature 513 527 6.3E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMIS_62420 05b9f5c144b18acf429a5cbce0ffa444 600 PRINTS PR01042 Aspartyl-tRNA synthetase signature 204 217 6.3E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMIS_62420 05b9f5c144b18acf429a5cbce0ffa444 600 PRINTS PR01042 Aspartyl-tRNA synthetase signature 469 485 6.3E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMIS_62420 05b9f5c144b18acf429a5cbce0ffa444 600 PRINTS PR01042 Aspartyl-tRNA synthetase signature 187 199 6.3E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMIS_62420 05b9f5c144b18acf429a5cbce0ffa444 600 Pfam PF00152 tRNA synthetases class II (D, K and N) 116 552 7.8E-101 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMIS_62420 05b9f5c144b18acf429a5cbce0ffa444 600 Gene3D G3DSA:2.40.50.140 1 101 9.9E-31 T 14-10-2018 AMIS_62420 05b9f5c144b18acf429a5cbce0ffa444 600 Gene3D G3DSA:3.30.930.10 114 574 2.1E-181 T 14-10-2018 AMIS_62420 05b9f5c144b18acf429a5cbce0ffa444 600 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 3 574 2.2E-214 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 AMIS_62420 05b9f5c144b18acf429a5cbce0ffa444 600 Gene3D G3DSA:3.30.1360.30 269 415 2.1E-181 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 AMIS_62420 05b9f5c144b18acf429a5cbce0ffa444 600 Pfam PF01336 OB-fold nucleic acid binding domain 19 95 3.1E-14 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AMIS_62420 05b9f5c144b18acf429a5cbce0ffa444 600 SUPERFAMILY SSF50249 3 100 2.1E-27 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMIS_62420 05b9f5c144b18acf429a5cbce0ffa444 600 SUPERFAMILY SSF55681 114 578 3.19E-100 T 14-10-2018 AMIS_900 9d3e0c702966b197cc011f219d72a284 406 Gene3D G3DSA:1.20.1250.20 7 198 1.9E-19 T 14-10-2018 AMIS_900 9d3e0c702966b197cc011f219d72a284 406 Pfam PF07690 Major Facilitator Superfamily 14 328 2.6E-22 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_900 9d3e0c702966b197cc011f219d72a284 406 SUPERFAMILY SSF103473 8 389 5.23E-44 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_900 9d3e0c702966b197cc011f219d72a284 406 Gene3D G3DSA:1.20.1250.20 206 403 1.6E-16 T 14-10-2018 AMIS_23110 1d512dc05beab1ef3141f43b3c1af5bb 172 TIGRFAM TIGR02983 SigE-fam_strep: RNA polymerase sigma-70 factor, sigma-E family 4 157 6.5E-44 T 14-10-2018 IPR014325 RNA polymerase sigma-E factor, actinobacteria GO:0016987 AMIS_23110 1d512dc05beab1ef3141f43b3c1af5bb 172 Gene3D G3DSA:1.10.1740.10 1 77 5.4E-9 T 14-10-2018 AMIS_23110 1d512dc05beab1ef3141f43b3c1af5bb 172 SUPERFAMILY SSF88946 4 82 3.02E-12 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_23110 1d512dc05beab1ef3141f43b3c1af5bb 172 Pfam PF04542 Sigma-70 region 2 10 71 1.5E-7 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_23110 1d512dc05beab1ef3141f43b3c1af5bb 172 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 5 155 3.2E-19 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_23110 1d512dc05beab1ef3141f43b3c1af5bb 172 Gene3D G3DSA:1.10.10.10 81 159 1.3E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_23110 1d512dc05beab1ef3141f43b3c1af5bb 172 SUPERFAMILY SSF88659 85 156 3.27E-13 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_23110 1d512dc05beab1ef3141f43b3c1af5bb 172 Pfam PF08281 Sigma-70, region 4 99 151 2.3E-12 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_56420 51cb4d58dff19da449b5c2ef2b627df3 473 SUPERFAMILY SSF110221 351 466 4.32E-8 T 14-10-2018 IPR036195 Alpha-L-arabinofuranosidase B, arabinose-binding domain superfamily GO:0046373|GO:0046556 AMIS_56420 51cb4d58dff19da449b5c2ef2b627df3 473 Gene3D G3DSA:2.80.10.50 362 472 1.3E-6 T 14-10-2018 AMIS_56420 51cb4d58dff19da449b5c2ef2b627df3 473 Pfam PF04616 Glycosyl hydrolases family 43 53 351 7.7E-57 T 14-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 AMIS_56420 51cb4d58dff19da449b5c2ef2b627df3 473 SUPERFAMILY SSF75005 53 360 4.23E-62 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMIS_56420 51cb4d58dff19da449b5c2ef2b627df3 473 Gene3D G3DSA:2.115.10.20 48 360 1.5E-88 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMIS_77350 64480583fd0fb5318466e6fb6f522154 550 Gene3D G3DSA:3.40.50.200 117 548 1.1E-76 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AMIS_77350 64480583fd0fb5318466e6fb6f522154 550 Pfam PF00082 Subtilase family 151 502 1.7E-38 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AMIS_77350 64480583fd0fb5318466e6fb6f522154 550 PRINTS PR00723 Subtilisin serine protease family (S8) signature 150 169 8.2E-20 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMIS_77350 64480583fd0fb5318466e6fb6f522154 550 PRINTS PR00723 Subtilisin serine protease family (S8) signature 455 471 8.2E-20 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMIS_77350 64480583fd0fb5318466e6fb6f522154 550 PRINTS PR00723 Subtilisin serine protease family (S8) signature 204 217 8.2E-20 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMIS_77350 64480583fd0fb5318466e6fb6f522154 550 SUPERFAMILY SSF52743 133 548 1.03E-62 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AMIS_77350 64480583fd0fb5318466e6fb6f522154 550 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 208 218 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site AMIS_77350 64480583fd0fb5318466e6fb6f522154 550 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 155 166 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site AMIS_77350 64480583fd0fb5318466e6fb6f522154 550 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 456 466 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site AMIS_61270 73336b78068f75778c7ff4414c1d5a95 203 SUPERFAMILY SSF50486 10 194 8.63E-53 T 14-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 AMIS_61270 73336b78068f75778c7ff4414c1d5a95 203 Hamap MF_00527 Putative 3-methyladenine DNA glycosylase. 5 188 27.194 T 14-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AMIS_61270 73336b78068f75778c7ff4414c1d5a95 203 Pfam PF02245 Methylpurine-DNA glycosylase (MPG) 10 185 7.9E-58 T 14-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AMIS_61270 73336b78068f75778c7ff4414c1d5a95 203 Gene3D G3DSA:3.10.300.10 6 198 1.7E-57 T 14-10-2018 IPR036995 Methylpurine-DNA glycosylase superfamily GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AMIS_61270 73336b78068f75778c7ff4414c1d5a95 203 TIGRFAM TIGR00567 3mg: DNA-3-methyladenine glycosylase 11 188 2.2E-47 T 14-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AMIS_27540 9f9006dbb2ca63abe492ba165c393d26 133 Pfam PF01695 IstB-like ATP binding protein 9 106 7.6E-25 T 14-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 AMIS_27540 9f9006dbb2ca63abe492ba165c393d26 133 Gene3D G3DSA:3.40.50.300 3 129 4.4E-23 T 14-10-2018 AMIS_27540 9f9006dbb2ca63abe492ba165c393d26 133 SUPERFAMILY SSF52540 8 105 7.19E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_560 e01d5053793e4757f9887ad831cbc9ed 352 Pfam PF01595 Domain of unknown function DUF21 6 196 1.4E-32 T 14-10-2018 IPR002550 CNNM, transmembrane domain AMIS_560 e01d5053793e4757f9887ad831cbc9ed 352 Pfam PF00571 CBS domain 221 269 0.0059 T 14-10-2018 IPR000644 CBS domain AMIS_560 e01d5053793e4757f9887ad831cbc9ed 352 Pfam PF00571 CBS domain 284 332 9.5E-7 T 14-10-2018 IPR000644 CBS domain AMIS_560 e01d5053793e4757f9887ad831cbc9ed 352 SMART SM00116 222 271 0.064 T 14-10-2018 IPR000644 CBS domain AMIS_560 e01d5053793e4757f9887ad831cbc9ed 352 SMART SM00116 285 332 0.019 T 14-10-2018 IPR000644 CBS domain AMIS_560 e01d5053793e4757f9887ad831cbc9ed 352 Gene3D G3DSA:3.10.580.10 196 336 3.9E-26 T 14-10-2018 AMIS_560 e01d5053793e4757f9887ad831cbc9ed 352 SUPERFAMILY SSF54631 203 334 7.08E-22 T 14-10-2018 AMIS_14810 eff0c9f034b85a1cc502dab9e4e8250b 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 68 83 2.4E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_14810 eff0c9f034b85a1cc502dab9e4e8250b 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 103 2.4E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_14810 eff0c9f034b85a1cc502dab9e4e8250b 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 117 137 2.4E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_14810 eff0c9f034b85a1cc502dab9e4e8250b 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 51 67 2.4E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_14810 eff0c9f034b85a1cc502dab9e4e8250b 155 SMART SM00347 28 127 1.7E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_14810 eff0c9f034b85a1cc502dab9e4e8250b 155 Pfam PF01047 MarR family 51 91 1.4E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_14810 eff0c9f034b85a1cc502dab9e4e8250b 155 Gene3D G3DSA:1.10.10.10 1 139 3.5E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_14810 eff0c9f034b85a1cc502dab9e4e8250b 155 SUPERFAMILY SSF46785 9 138 7.26E-27 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_68650 452930e6443af4f22238d3aaceb4af75 192 SUPERFAMILY SSF48150 14 139 1.03E-11 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AMIS_68650 452930e6443af4f22238d3aaceb4af75 192 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 26 188 1.3E-12 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AMIS_68650 452930e6443af4f22238d3aaceb4af75 192 TIGRFAM TIGR03252 TIGR03252: uncharacterized HhH-GPD family protein 5 190 2.1E-81 T 14-10-2018 IPR017658 Conserved hypothetical protein CHP03252, HhH-GPD AMIS_70490 12f3f390cb067db93345862c80e6b2a1 756 Gene3D G3DSA:3.30.70.260 685 754 2.8E-6 T 14-10-2018 AMIS_70490 12f3f390cb067db93345862c80e6b2a1 756 SUPERFAMILY SSF109604 384 535 1.35E-15 T 14-10-2018 AMIS_70490 12f3f390cb067db93345862c80e6b2a1 756 Gene3D G3DSA:1.10.3210.10 402 544 7.3E-7 T 14-10-2018 AMIS_70490 12f3f390cb067db93345862c80e6b2a1 756 SUPERFAMILY SSF55021 589 637 7.08E-5 T 14-10-2018 AMIS_70490 12f3f390cb067db93345862c80e6b2a1 756 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 756 57.245 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AMIS_70490 12f3f390cb067db93345862c80e6b2a1 756 SUPERFAMILY SSF81301 38 148 2.76E-13 T 14-10-2018 AMIS_70490 12f3f390cb067db93345862c80e6b2a1 756 SUPERFAMILY SSF55021 687 749 7.91E-9 T 14-10-2018 AMIS_70490 12f3f390cb067db93345862c80e6b2a1 756 Pfam PF01966 HD domain 419 514 2.1E-9 T 14-10-2018 IPR006674 HD domain AMIS_26310 3a646b29a24f20c8ffe9f0a30f73eac8 319 Gene3D G3DSA:1.10.3720.10 76 318 1.4E-70 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_26310 3a646b29a24f20c8ffe9f0a30f73eac8 319 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 306 9.5E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_26310 3a646b29a24f20c8ffe9f0a30f73eac8 319 SUPERFAMILY SSF161098 80 304 4.06E-64 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_73550 c0fe47d9724c4a069539f0ab8dd7ce98 315 Pfam PF14789 Tetrahydrodipicolinate N-succinyltransferase middle 107 147 1.6E-15 T 14-10-2018 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117 AMIS_73550 c0fe47d9724c4a069539f0ab8dd7ce98 315 TIGRFAM TIGR03535 DapD_actino: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 10 314 8.4E-141 T 14-10-2018 IPR019875 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, actinobacteria KEGG: 00300+2.3.1.117 AMIS_73550 c0fe47d9724c4a069539f0ab8dd7ce98 315 Hamap MF_02122 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 7 312 43.568 T 14-10-2018 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family GO:0008666 KEGG: 00300+2.3.1.117 AMIS_73550 c0fe47d9724c4a069539f0ab8dd7ce98 315 Gene3D G3DSA:2.160.10.10 148 315 1.7E-67 T 14-10-2018 AMIS_73550 c0fe47d9724c4a069539f0ab8dd7ce98 315 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 229 261 6.3E-16 T 14-10-2018 IPR001451 Hexapeptide repeat AMIS_73550 c0fe47d9724c4a069539f0ab8dd7ce98 315 SUPERFAMILY SSF51161 74 294 1.16E-37 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily AMIS_73550 c0fe47d9724c4a069539f0ab8dd7ce98 315 Gene3D G3DSA:3.30.60.70 107 147 1.1E-12 T 14-10-2018 IPR038361 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain superfamily KEGG: 00300+2.3.1.117 AMIS_73550 c0fe47d9724c4a069539f0ab8dd7ce98 315 Gene3D G3DSA:3.30.70.2010 3 106 8.5E-29 T 14-10-2018 AMIS_23530 086a499f268b35ecd218314468e27276 303 Gene3D G3DSA:3.30.420.40 114 272 4.9E-48 T 14-10-2018 AMIS_23530 086a499f268b35ecd218314468e27276 303 Gene3D G3DSA:3.30.420.40 4 284 4.9E-48 T 14-10-2018 AMIS_23530 086a499f268b35ecd218314468e27276 303 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 5 236 2.7E-18 T 14-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 AMIS_23530 086a499f268b35ecd218314468e27276 303 SUPERFAMILY SSF53067 1 111 1.03E-13 T 14-10-2018 AMIS_23530 086a499f268b35ecd218314468e27276 303 SUPERFAMILY SSF53067 116 286 1.84E-27 T 14-10-2018 AMIS_15470 56fcf961792804304b866a29305a4778 241 Gene3D G3DSA:3.20.20.70 1 240 5.6E-95 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_15470 56fcf961792804304b866a29305a4778 241 SUPERFAMILY SSF51366 3 236 5.65E-66 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AMIS_15470 56fcf961792804304b866a29305a4778 241 TIGRFAM TIGR01919 hisA-trpF: bifunctional HisA/TrpF protein 2 237 5.9E-115 T 14-10-2018 IPR010188 Bifunctional HisA/TrpF GO:0000105|GO:0000162|GO:0003949|GO:0004640|GO:0005737 KEGG: 00340+5.3.1.16 AMIS_15470 56fcf961792804304b866a29305a4778 241 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 4 237 33.24 T 14-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 AMIS_15470 56fcf961792804304b866a29305a4778 241 Pfam PF00977 Histidine biosynthesis protein 5 230 3.4E-67 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 AMIS_32590 adefd02dce8ead90b917ec169248dd31 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 251 2.5E-61 T 14-10-2018 AMIS_32590 adefd02dce8ead90b917ec169248dd31 253 Gene3D G3DSA:3.40.50.720 2 252 2.4E-85 T 14-10-2018 AMIS_32590 adefd02dce8ead90b917ec169248dd31 253 SUPERFAMILY SSF51735 6 252 4.5E-82 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_32590 adefd02dce8ead90b917ec169248dd31 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 2.7E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_32590 adefd02dce8ead90b917ec169248dd31 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 2.7E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_32590 adefd02dce8ead90b917ec169248dd31 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 2.7E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_32590 adefd02dce8ead90b917ec169248dd31 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 2.7E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_32590 adefd02dce8ead90b917ec169248dd31 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 2.7E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_32590 adefd02dce8ead90b917ec169248dd31 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 2.7E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_32590 adefd02dce8ead90b917ec169248dd31 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 7.1E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_32590 adefd02dce8ead90b917ec169248dd31 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 7.1E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_32590 adefd02dce8ead90b917ec169248dd31 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 7.1E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_32590 adefd02dce8ead90b917ec169248dd31 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMIS_8170 4ad9a9842a4e49c1efd2211cdf993ce7 252 Gene3D G3DSA:3.30.450.40 86 252 2.9E-43 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_8170 4ad9a9842a4e49c1efd2211cdf993ce7 252 SUPERFAMILY SSF46785 12 80 9.11E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_8170 4ad9a9842a4e49c1efd2211cdf993ce7 252 Gene3D G3DSA:1.10.10.10 3 79 4.0E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_8170 4ad9a9842a4e49c1efd2211cdf993ce7 252 Pfam PF09339 IclR helix-turn-helix domain 13 61 6.8E-11 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AMIS_8170 4ad9a9842a4e49c1efd2211cdf993ce7 252 SMART SM00346 10 99 2.6E-14 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AMIS_8170 4ad9a9842a4e49c1efd2211cdf993ce7 252 SUPERFAMILY SSF55781 74 251 1.05E-38 T 14-10-2018 AMIS_8170 4ad9a9842a4e49c1efd2211cdf993ce7 252 Pfam PF01614 Bacterial transcriptional regulator 130 248 2.4E-19 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal AMIS_43940 a117ef6fda4bd4277ccaf69bc1de2206 347 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AMIS_43940 a117ef6fda4bd4277ccaf69bc1de2206 347 Gene3D G3DSA:3.90.180.10 14 341 3.0E-136 T 14-10-2018 AMIS_43940 a117ef6fda4bd4277ccaf69bc1de2206 347 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 143 2.2E-29 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMIS_43940 a117ef6fda4bd4277ccaf69bc1de2206 347 SUPERFAMILY SSF51735 149 311 5.63E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_43940 a117ef6fda4bd4277ccaf69bc1de2206 347 Gene3D G3DSA:3.40.50.720 159 313 3.0E-136 T 14-10-2018 AMIS_43940 a117ef6fda4bd4277ccaf69bc1de2206 347 Pfam PF00107 Zinc-binding dehydrogenase 185 307 4.4E-20 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMIS_43940 a117ef6fda4bd4277ccaf69bc1de2206 347 SUPERFAMILY SSF50129 7 171 3.96E-53 T 14-10-2018 IPR011032 GroES-like superfamily AMIS_43940 a117ef6fda4bd4277ccaf69bc1de2206 347 SMART SM00829 11 341 2.2E-7 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMIS_63800 c198c2e6c8d81ed1689674d22e7265c3 120 ProSitePatterns PS00768 Transthyretin signature 1. 18 33 - T 14-10-2018 IPR023418 Transthyretin, thyroxine binding site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AMIS_63800 c198c2e6c8d81ed1689674d22e7265c3 120 SUPERFAMILY SSF49472 10 120 7.19E-36 T 14-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AMIS_63800 c198c2e6c8d81ed1689674d22e7265c3 120 Pfam PF00576 HIUase/Transthyretin family 15 119 5.6E-32 T 14-10-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase domain Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AMIS_63800 c198c2e6c8d81ed1689674d22e7265c3 120 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 13 120 9.3E-35 T 14-10-2018 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 AMIS_63800 c198c2e6c8d81ed1689674d22e7265c3 120 Gene3D G3DSA:2.60.40.180 11 120 1.3E-35 T 14-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AMIS_30810 010003ed1db110be36af4c3bcd819c61 193 SUPERFAMILY SSF55729 9 172 3.65E-24 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_30810 010003ed1db110be36af4c3bcd819c61 193 Gene3D G3DSA:3.40.630.30 8 191 4.7E-24 T 14-10-2018 AMIS_30810 010003ed1db110be36af4c3bcd819c61 193 Pfam PF00583 Acetyltransferase (GNAT) family 46 165 3.0E-14 T 14-10-2018 IPR000182 GNAT domain AMIS_1240 905e8e3db1764f114ed2c6929a16d4c3 375 Pfam PF04055 Radical SAM superfamily 21 165 4.9E-12 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMIS_1240 905e8e3db1764f114ed2c6929a16d4c3 375 Gene3D G3DSA:3.20.20.70 15 367 6.0E-55 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_1240 905e8e3db1764f114ed2c6929a16d4c3 375 SUPERFAMILY SSF102114 14 331 1.96E-28 T 14-10-2018 AMIS_6310 de274500897267ed7179b0fe804aeefa 208 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 97 5.1E-30 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 AMIS_6310 de274500897267ed7179b0fe804aeefa 208 ProSitePatterns PS00632 Ribosomal protein S4 signature. 96 120 - T 14-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_6310 de274500897267ed7179b0fe804aeefa 208 Gene3D G3DSA:3.10.290.10 97 193 4.5E-78 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AMIS_6310 de274500897267ed7179b0fe804aeefa 208 Pfam PF01479 S4 domain 99 145 2.8E-19 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_6310 de274500897267ed7179b0fe804aeefa 208 SUPERFAMILY SSF55174 3 208 1.44E-64 T 14-10-2018 AMIS_6310 de274500897267ed7179b0fe804aeefa 208 SMART SM01390 3 97 3.6E-46 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 AMIS_6310 de274500897267ed7179b0fe804aeefa 208 SMART SM00363 98 160 1.6E-17 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_6310 de274500897267ed7179b0fe804aeefa 208 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 208 32.854 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 AMIS_6310 de274500897267ed7179b0fe804aeefa 208 Gene3D G3DSA:1.10.1050.10 6 208 4.5E-78 T 14-10-2018 AMIS_6310 de274500897267ed7179b0fe804aeefa 208 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 208 4.6E-66 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 AMIS_12330 8424e7904abf2b66895b97087ac7a590 345 Gene3D G3DSA:3.40.50.2300 155 340 1.9E-73 T 14-10-2018 AMIS_12330 8424e7904abf2b66895b97087ac7a590 345 Pfam PF13407 Periplasmic binding protein domain 53 311 8.9E-38 T 14-10-2018 IPR025997 Periplasmic binding protein AMIS_12330 8424e7904abf2b66895b97087ac7a590 345 SUPERFAMILY SSF53822 49 341 5.03E-53 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_12330 8424e7904abf2b66895b97087ac7a590 345 Gene3D G3DSA:3.40.50.2300 53 328 1.9E-73 T 14-10-2018 AMIS_38370 47d5e44345e5eb29780107ecb85b8553 393 SUPERFAMILY SSF46955 7 62 6.41E-9 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily AMIS_38370 47d5e44345e5eb29780107ecb85b8553 393 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 7 54 4.6E-9 T 14-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 AMIS_38370 47d5e44345e5eb29780107ecb85b8553 393 Gene3D G3DSA:1.10.1660.10 6 72 8.1E-9 T 14-10-2018 AMIS_38370 47d5e44345e5eb29780107ecb85b8553 393 SUPERFAMILY SSF48256 50 391 1.44E-65 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 AMIS_38370 47d5e44345e5eb29780107ecb85b8553 393 Gene3D G3DSA:1.10.230.10 256 347 1.3E-58 T 14-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain AMIS_38370 47d5e44345e5eb29780107ecb85b8553 393 Pfam PF12728 Helix-turn-helix domain 7 57 2.6E-9 T 14-10-2018 AMIS_38370 47d5e44345e5eb29780107ecb85b8553 393 Gene3D G3DSA:1.10.580.10 78 373 1.3E-58 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AMIS_38370 47d5e44345e5eb29780107ecb85b8553 393 Pfam PF00285 Citrate synthase, C-terminal domain 63 381 2.6E-62 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 AMIS_11530 02489615a31c2c84cf2b50974910aad3 210 SMART SM00855 4 157 4.5E-17 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AMIS_11530 02489615a31c2c84cf2b50974910aad3 210 PIRSF PIRSF000709 1 112 1.2E-6 T 14-10-2018 AMIS_11530 02489615a31c2c84cf2b50974910aad3 210 Gene3D G3DSA:3.40.50.1240 1 206 3.1E-60 T 14-10-2018 IPR029033 Histidine phosphatase superfamily AMIS_11530 02489615a31c2c84cf2b50974910aad3 210 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 197 3.8E-53 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AMIS_11530 02489615a31c2c84cf2b50974910aad3 210 SUPERFAMILY SSF53254 2 206 6.91E-54 T 14-10-2018 IPR029033 Histidine phosphatase superfamily AMIS_52940 af2904ca717c1813191cd7f5e10a1662 269 SUPERFAMILY SSF52540 6 229 7.48E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_52940 af2904ca717c1813191cd7f5e10a1662 269 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_52940 af2904ca717c1813191cd7f5e10a1662 269 SMART SM00382 28 217 9.1E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_52940 af2904ca717c1813191cd7f5e10a1662 269 Gene3D G3DSA:3.40.50.300 5 257 2.8E-64 T 14-10-2018 AMIS_52940 af2904ca717c1813191cd7f5e10a1662 269 Pfam PF00005 ABC transporter 20 167 2.1E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_59810 b99905d8fabfd42dd33742456004b394 139 SUPERFAMILY SSF52949 7 136 6.12E-22 T 14-10-2018 AMIS_59810 b99905d8fabfd42dd33742456004b394 139 Gene3D G3DSA:3.40.220.10 4 138 8.6E-20 T 14-10-2018 AMIS_2800 68fdacda18d82c164b5c47a1207ef443 231 SUPERFAMILY SSF53335 3 226 1.15E-42 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_2800 68fdacda18d82c164b5c47a1207ef443 231 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 24 39 - T 14-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 AMIS_2800 68fdacda18d82c164b5c47a1207ef443 231 Pfam PF01209 ubiE/COQ5 methyltransferase family 11 229 1.1E-53 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 AMIS_2800 68fdacda18d82c164b5c47a1207ef443 231 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 4 230 32.066 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 AMIS_2800 68fdacda18d82c164b5c47a1207ef443 231 Gene3D G3DSA:3.40.50.150 19 231 8.5E-53 T 14-10-2018 AMIS_2800 68fdacda18d82c164b5c47a1207ef443 231 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 13 229 2.4E-63 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 AMIS_2800 68fdacda18d82c164b5c47a1207ef443 231 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 137 151 - T 14-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 AMIS_35840 31006cb8f3e02c2e2701a83b2d8eea53 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 37 52 9.4E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_35840 31006cb8f3e02c2e2701a83b2d8eea53 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 52 67 9.4E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_35840 31006cb8f3e02c2e2701a83b2d8eea53 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 5 20 9.4E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_35840 31006cb8f3e02c2e2701a83b2d8eea53 115 Pfam PF12840 Helix-turn-helix domain 2 61 2.3E-18 T 14-10-2018 AMIS_35840 31006cb8f3e02c2e2701a83b2d8eea53 115 Gene3D G3DSA:1.10.10.10 1 105 3.5E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_35840 31006cb8f3e02c2e2701a83b2d8eea53 115 SMART SM00418 3 81 8.8E-21 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_35840 31006cb8f3e02c2e2701a83b2d8eea53 115 SUPERFAMILY SSF46785 1 96 7.21E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_3760 4c3139e6f1d9e9947b420286a1327317 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 60 7.3E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_3760 4c3139e6f1d9e9947b420286a1327317 204 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 84 196 3.1E-14 T 14-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal AMIS_3760 4c3139e6f1d9e9947b420286a1327317 204 SUPERFAMILY SSF46689 3 74 6.16E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_3760 4c3139e6f1d9e9947b420286a1327317 204 SUPERFAMILY SSF48498 81 191 8.56E-13 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_3760 4c3139e6f1d9e9947b420286a1327317 204 Gene3D G3DSA:1.10.357.10 1 196 3.5E-43 T 14-10-2018 AMIS_75910 7ea7bc601df464a082dcb0144eb8fcec 33 SMART SM01155 1 33 8.6E-7 T 14-10-2018 IPR013177 Domain of unknown function DUF1713 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_75910 7ea7bc601df464a082dcb0144eb8fcec 33 Pfam PF08213 Mitochondrial domain of unknown function (DUF1713) 1 33 8.6E-11 T 14-10-2018 IPR013177 Domain of unknown function DUF1713 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_35070 08351d03f4bd6565457872274c87d21b 214 SUPERFAMILY SSF50475 54 181 3.57E-15 T 14-10-2018 AMIS_35070 08351d03f4bd6565457872274c87d21b 214 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 57 148 3.4E-12 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AMIS_35070 08351d03f4bd6565457872274c87d21b 214 Gene3D G3DSA:2.30.110.10 47 173 2.0E-26 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AMIS_6080 71bfced6db0f7fa5fd2a6a547f5d535e 146 Gene3D G3DSA:3.90.470.10 12 140 7.9E-49 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 AMIS_6080 71bfced6db0f7fa5fd2a6a547f5d535e 146 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 15 117 8.2E-46 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_6080 71bfced6db0f7fa5fd2a6a547f5d535e 146 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 11 120 29.718 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_6080 71bfced6db0f7fa5fd2a6a547f5d535e 146 ProSitePatterns PS00464 Ribosomal protein L22 signature. 93 117 - T 14-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_6080 71bfced6db0f7fa5fd2a6a547f5d535e 146 SUPERFAMILY SSF54843 13 119 1.96E-42 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 AMIS_6080 71bfced6db0f7fa5fd2a6a547f5d535e 146 Pfam PF00237 Ribosomal protein L22p/L17e 15 117 1.8E-37 T 14-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 AMIS_37620 387d541f632399538c6803bb2f5381aa 403 Gene3D G3DSA:3.40.190.10 170 397 5.1E-79 T 14-10-2018 AMIS_37620 387d541f632399538c6803bb2f5381aa 403 Pfam PF13416 Bacterial extracellular solute-binding protein 74 342 4.6E-31 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein AMIS_37620 387d541f632399538c6803bb2f5381aa 403 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 288 307 2.8E-14 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMIS_37620 387d541f632399538c6803bb2f5381aa 403 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 112 126 2.8E-14 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMIS_37620 387d541f632399538c6803bb2f5381aa 403 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 161 177 2.8E-14 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMIS_37620 387d541f632399538c6803bb2f5381aa 403 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 186 200 2.8E-14 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMIS_37620 387d541f632399538c6803bb2f5381aa 403 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 204 223 2.8E-14 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMIS_37620 387d541f632399538c6803bb2f5381aa 403 SUPERFAMILY SSF53850 55 401 6.21E-56 T 14-10-2018 AMIS_37620 387d541f632399538c6803bb2f5381aa 403 Gene3D G3DSA:3.40.190.10 60 369 5.1E-79 T 14-10-2018 AMIS_7120 3b5f113a06eaab49cf0fca6542c86351 811 SUPERFAMILY SSF52540 40 696 5.26E-179 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_7120 3b5f113a06eaab49cf0fca6542c86351 811 TIGRFAM TIGR01073 pcrA: ATP-dependent DNA helicase PcrA 43 809 1.7E-289 T 14-10-2018 IPR005751 ATP-dependent DNA helicase PcrA GO:0004003|GO:0005737|GO:0006268 AMIS_7120 3b5f113a06eaab49cf0fca6542c86351 811 Gene3D G3DSA:3.40.50.300 324 687 8.9E-125 T 14-10-2018 AMIS_7120 3b5f113a06eaab49cf0fca6542c86351 811 Gene3D G3DSA:3.40.50.300 47 317 7.9E-100 T 14-10-2018 AMIS_7120 3b5f113a06eaab49cf0fca6542c86351 811 Gene3D G3DSA:1.10.486.10 427 602 8.9E-125 T 14-10-2018 AMIS_7120 3b5f113a06eaab49cf0fca6542c86351 811 Gene3D G3DSA:1.10.10.160 148 227 7.9E-100 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily AMIS_7120 3b5f113a06eaab49cf0fca6542c86351 811 Pfam PF13361 UvrD-like helicase C-terminal domain 321 669 8.3E-66 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AMIS_7120 3b5f113a06eaab49cf0fca6542c86351 811 Pfam PF00580 UvrD/REP helicase N-terminal domain 48 315 1.3E-78 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AMIS_62280 991295c64cfeb735525595c33d34c6cf 403 SUPERFAMILY SSF103473 11 398 3.01E-62 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_62280 991295c64cfeb735525595c33d34c6cf 403 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 16 395 2.0E-90 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 AMIS_62280 991295c64cfeb735525595c33d34c6cf 403 Pfam PF07690 Major Facilitator Superfamily 24 363 1.7E-43 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_62280 991295c64cfeb735525595c33d34c6cf 403 Gene3D G3DSA:1.20.1720.10 18 396 1.9E-99 T 14-10-2018 AMIS_72050 7af7e6917fc54d42cc698150b147246d 215 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 12 206 8.9E-52 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 AMIS_72050 7af7e6917fc54d42cc698150b147246d 215 Gene3D G3DSA:3.90.870.10 3 212 2.9E-60 T 14-10-2018 AMIS_72050 7af7e6917fc54d42cc698150b147246d 215 Pfam PF01300 Telomere recombination 22 196 3.1E-40 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 AMIS_72050 7af7e6917fc54d42cc698150b147246d 215 SUPERFAMILY SSF55821 3 209 1.31E-50 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AMIS_67540 95cf0e884212cb11326466ec3b09cf44 503 Gene3D G3DSA:3.20.20.80 18 382 4.0E-214 T 14-10-2018 AMIS_67540 95cf0e884212cb11326466ec3b09cf44 503 Pfam PF06964 Alpha-L-arabinofuranosidase C-terminal domain 291 494 2.0E-38 T 14-10-2018 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 AMIS_67540 95cf0e884212cb11326466ec3b09cf44 503 SUPERFAMILY SSF51011 370 501 3.96E-31 T 14-10-2018 AMIS_67540 95cf0e884212cb11326466ec3b09cf44 503 Gene3D G3DSA:2.60.40.1180 6 499 4.0E-214 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta AMIS_67540 95cf0e884212cb11326466ec3b09cf44 503 SMART SM00813 291 494 1.8E-72 T 14-10-2018 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 AMIS_67540 95cf0e884212cb11326466ec3b09cf44 503 SUPERFAMILY SSF51445 17 378 1.76E-109 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_33710 f4aa8374bee872f0937106f1695f6dfc 364 Gene3D G3DSA:3.40.50.970 2 353 6.4E-104 T 14-10-2018 AMIS_33710 f4aa8374bee872f0937106f1695f6dfc 364 SUPERFAMILY SSF52518 35 355 5.72E-92 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold AMIS_33710 f4aa8374bee872f0937106f1695f6dfc 364 TIGRFAM TIGR03181 PDH_E1_alph_x: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 15 352 4.4E-124 T 14-10-2018 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 AMIS_33710 f4aa8374bee872f0937106f1695f6dfc 364 Pfam PF00676 Dehydrogenase E1 component 48 310 2.2E-69 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 AMIS_60760 d87bad57368af9ee1fb684284eb2f4e7 245 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 73 233 1.7E-45 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AMIS_60760 d87bad57368af9ee1fb684284eb2f4e7 245 SUPERFAMILY SSF55174 8 95 8.24E-14 T 14-10-2018 AMIS_60760 d87bad57368af9ee1fb684284eb2f4e7 245 Gene3D G3DSA:3.30.70.580 69 236 6.1E-53 T 14-10-2018 AMIS_60760 d87bad57368af9ee1fb684284eb2f4e7 245 Pfam PF01479 S4 domain 8 49 1.9E-11 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_60760 d87bad57368af9ee1fb684284eb2f4e7 245 Gene3D G3DSA:3.10.290.10 3 63 3.2E-22 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AMIS_60760 d87bad57368af9ee1fb684284eb2f4e7 245 SMART SM00363 8 76 1.0E-7 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_60760 d87bad57368af9ee1fb684284eb2f4e7 245 Gene3D G3DSA:3.30.70.1560 136 219 6.1E-53 T 14-10-2018 AMIS_60760 d87bad57368af9ee1fb684284eb2f4e7 245 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 107 121 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AMIS_60760 d87bad57368af9ee1fb684284eb2f4e7 245 Pfam PF00849 RNA pseudouridylate synthase 69 201 1.4E-20 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMIS_60760 d87bad57368af9ee1fb684284eb2f4e7 245 SUPERFAMILY SSF55120 69 236 4.32E-44 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMIS_52200 9af044c00569c4c9074d953e99a0ef2a 416 Pfam PF02653 Branched-chain amino acid transport system / permease component 61 402 3.7E-37 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 AMIS_30620 481a507227b6debfa90b8d868929a2bf 260 Pfam PF16127 Domain of unknown function (DUF4839) 139 260 2.8E-55 T 14-10-2018 IPR032290 Protein of unknown function DUF4839 AMIS_23060 df67b4679d475a63e41f58ea1546a217 727 Gene3D G3DSA:3.40.50.740 66 479 5.4E-95 T 14-10-2018 AMIS_23060 df67b4679d475a63e41f58ea1546a217 727 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 6 52 9.2E-11 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_23060 df67b4679d475a63e41f58ea1546a217 727 Gene3D G3DSA:2.40.40.20 586 727 9.4E-25 T 14-10-2018 AMIS_23060 df67b4679d475a63e41f58ea1546a217 727 SUPERFAMILY SSF53706 2 584 9.82E-121 T 14-10-2018 AMIS_23060 df67b4679d475a63e41f58ea1546a217 727 Pfam PF00384 Molybdopterin oxidoreductase 59 432 7.0E-37 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_23060 df67b4679d475a63e41f58ea1546a217 727 SUPERFAMILY SSF50692 600 726 7.69E-32 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily AMIS_23060 df67b4679d475a63e41f58ea1546a217 727 Gene3D G3DSA:2.20.25.90 1 61 6.1E-13 T 14-10-2018 AMIS_23060 df67b4679d475a63e41f58ea1546a217 727 Pfam PF01568 Molydopterin dinucleotide binding domain 601 718 1.9E-22 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 AMIS_23060 df67b4679d475a63e41f58ea1546a217 727 Gene3D G3DSA:3.40.228.10 134 333 5.4E-95 T 14-10-2018 AMIS_23060 df67b4679d475a63e41f58ea1546a217 727 SMART SM00926 1 55 1.2E-16 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_50990 d101fc8c77f8a6ba5c54f7261d051765 136 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 6 130 1.4E-8 T 14-10-2018 IPR028973 PhnB-like AMIS_50990 d101fc8c77f8a6ba5c54f7261d051765 136 SUPERFAMILY SSF54593 1 131 2.74E-32 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_50990 d101fc8c77f8a6ba5c54f7261d051765 136 Gene3D G3DSA:3.10.180.10 9 136 3.2E-42 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_6210 89afba1b60821ec0d2ea47a2816afeed 60 Gene3D G3DSA:3.30.1390.20 1 60 8.1E-27 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily AMIS_6210 89afba1b60821ec0d2ea47a2816afeed 60 SUPERFAMILY SSF55129 1 59 8.11E-22 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily AMIS_6210 89afba1b60821ec0d2ea47a2816afeed 60 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 20.16 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_6210 89afba1b60821ec0d2ea47a2816afeed 60 PIRSF PIRSF002211 1 60 6.6E-29 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_6210 89afba1b60821ec0d2ea47a2816afeed 60 Pfam PF00327 Ribosomal protein L30p/L7e 4 54 3.8E-19 T 14-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain AMIS_6210 89afba1b60821ec0d2ea47a2816afeed 60 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 9.7E-26 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_15650 e19ba8b2edf3608e45f076c7e744cd02 286 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 68 85 - T 14-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 AMIS_15650 e19ba8b2edf3608e45f076c7e744cd02 286 Hamap MF_00134_A Indole-3-glycerol phosphate synthase [trpC]. 48 270 30.399 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 AMIS_15650 e19ba8b2edf3608e45f076c7e744cd02 286 Gene3D G3DSA:3.20.20.70 13 286 9.0E-112 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_15650 e19ba8b2edf3608e45f076c7e744cd02 286 SUPERFAMILY SSF51366 29 274 5.09E-81 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AMIS_15650 e19ba8b2edf3608e45f076c7e744cd02 286 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 19 274 33.749 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 AMIS_15650 e19ba8b2edf3608e45f076c7e744cd02 286 Pfam PF00218 Indole-3-glycerol phosphate synthase 21 272 7.8E-82 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 AMIS_71330 dd46a0a6ed6b7a9047c3d376dcf6ed80 534 Pfam PF00149 Calcineurin-like phosphoesterase 255 363 3.0E-9 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AMIS_71330 dd46a0a6ed6b7a9047c3d376dcf6ed80 534 SUPERFAMILY SSF56300 253 473 1.24E-22 T 14-10-2018 AMIS_9110 d8f2ca8ec26fa7fbd83654ba719b1fb6 557 SMART SM00267 117 286 1.2E-53 T 14-10-2018 IPR000160 GGDEF domain AMIS_9110 d8f2ca8ec26fa7fbd83654ba719b1fb6 557 Pfam PF00990 Diguanylate cyclase, GGDEF domain 128 280 1.3E-41 T 14-10-2018 IPR000160 GGDEF domain AMIS_9110 d8f2ca8ec26fa7fbd83654ba719b1fb6 557 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 124 280 7.2E-36 T 14-10-2018 IPR000160 GGDEF domain AMIS_9110 d8f2ca8ec26fa7fbd83654ba719b1fb6 557 Pfam PF00563 EAL domain 302 536 6.4E-73 T 14-10-2018 IPR001633 EAL domain AMIS_9110 d8f2ca8ec26fa7fbd83654ba719b1fb6 557 SUPERFAMILY SSF55073 133 287 1.06E-41 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_9110 d8f2ca8ec26fa7fbd83654ba719b1fb6 557 Gene3D G3DSA:3.20.20.450 298 556 4.6E-93 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_9110 d8f2ca8ec26fa7fbd83654ba719b1fb6 557 Gene3D G3DSA:3.30.70.270 126 297 2.1E-47 T 14-10-2018 AMIS_9110 d8f2ca8ec26fa7fbd83654ba719b1fb6 557 SUPERFAMILY SSF141868 302 547 2.22E-83 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_9110 d8f2ca8ec26fa7fbd83654ba719b1fb6 557 SMART SM00052 296 541 9.6E-104 T 14-10-2018 IPR001633 EAL domain AMIS_42350 ab239a0e09b1efe7d67989aedb485752 207 SUPERFAMILY SSF55729 108 199 5.43E-6 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_42350 ab239a0e09b1efe7d67989aedb485752 207 Gene3D G3DSA:3.40.630.30 79 203 3.8E-5 T 14-10-2018 AMIS_62300 6077fac047994022ba5826129eccb42b 392 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 33 381 6.4E-48 T 14-10-2018 IPR003770 Endolytic murein transglycosylase AMIS_62300 6077fac047994022ba5826129eccb42b 392 Pfam PF02618 YceG-like family 74 381 1.3E-67 T 14-10-2018 IPR003770 Endolytic murein transglycosylase AMIS_62300 6077fac047994022ba5826129eccb42b 392 Gene3D G3DSA:1.10.8.1150 69 138 4.6E-11 T 14-10-2018 AMIS_62300 6077fac047994022ba5826129eccb42b 392 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 32 385 27.386 T 14-10-2018 IPR003770 Endolytic murein transglycosylase AMIS_64800 2b1f452497813567e5715f01dcdfb89d 199 Gene3D G3DSA:3.90.420.10 27 198 1.2E-38 T 14-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 AMIS_64800 2b1f452497813567e5715f01dcdfb89d 199 Pfam PF00174 Oxidoreductase molybdopterin binding domain 35 179 2.4E-29 T 14-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 AMIS_64800 2b1f452497813567e5715f01dcdfb89d 199 SUPERFAMILY SSF56524 16 197 3.92E-54 T 14-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 AMIS_62820 d39d06c3a72e8ebc6e2928d50d83a93c 172 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 156 42.916 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMIS_62820 d39d06c3a72e8ebc6e2928d50d83a93c 172 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 153 2.5E-52 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMIS_62820 d39d06c3a72e8ebc6e2928d50d83a93c 172 SUPERFAMILY SSF53098 3 158 3.03E-44 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily AMIS_62820 d39d06c3a72e8ebc6e2928d50d83a93c 172 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 2.5E-37 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMIS_62820 d39d06c3a72e8ebc6e2928d50d83a93c 172 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 63 79 2.5E-37 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMIS_62820 d39d06c3a72e8ebc6e2928d50d83a93c 172 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 85 101 2.5E-37 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMIS_62820 d39d06c3a72e8ebc6e2928d50d83a93c 172 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 141 153 2.5E-37 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMIS_62820 d39d06c3a72e8ebc6e2928d50d83a93c 172 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 109 128 2.5E-37 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMIS_62820 d39d06c3a72e8ebc6e2928d50d83a93c 172 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 154 7.4E-37 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMIS_62820 d39d06c3a72e8ebc6e2928d50d83a93c 172 Gene3D G3DSA:3.30.420.10 2 161 6.1E-47 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMIS_62820 d39d06c3a72e8ebc6e2928d50d83a93c 172 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 115 150 - T 14-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 AMIS_33050 e81f2d34a5272dc837ff79abdd502c1f 295 Pfam PF13560 Helix-turn-helix domain 7 85 6.7E-12 T 14-10-2018 AMIS_33050 e81f2d34a5272dc837ff79abdd502c1f 295 SMART SM00530 6 82 4.8E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMIS_33050 e81f2d34a5272dc837ff79abdd502c1f 295 Gene3D G3DSA:1.10.260.40 25 101 4.7E-7 T 14-10-2018 AMIS_33050 e81f2d34a5272dc837ff79abdd502c1f 295 SUPERFAMILY SSF47413 31 78 1.16E-6 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_33050 e81f2d34a5272dc837ff79abdd502c1f 295 Gene3D G3DSA:3.30.450.180 110 275 8.3E-11 T 14-10-2018 AMIS_80500 85b0d7aa34638d8e142f70d040d694ff 142 Pfam PF02566 OsmC-like protein 40 137 1.2E-19 T 14-10-2018 IPR003718 OsmC/Ohr family AMIS_80500 85b0d7aa34638d8e142f70d040d694ff 142 Gene3D G3DSA:3.30.300.20 3 139 3.9E-42 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta AMIS_80500 85b0d7aa34638d8e142f70d040d694ff 142 TIGRFAM TIGR03562 osmo_induc_OsmC: peroxiredoxin, OsmC subfamily 4 137 1.2E-54 T 14-10-2018 IPR019904 Peroxiredoxin OsmC GO:0004601|GO:0006979 KEGG: 00480+1.11.1.15 AMIS_80500 85b0d7aa34638d8e142f70d040d694ff 142 SUPERFAMILY SSF82784 3 138 1.44E-37 T 14-10-2018 IPR036102 OsmC/Ohr superfamily AMIS_56180 4bfd8cdeb67320cef2a79cbb416ab52d 728 SUPERFAMILY SSF52540 440 713 5.31E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_56180 4bfd8cdeb67320cef2a79cbb416ab52d 728 Gene3D G3DSA:3.40.50.300 488 716 1.7E-144 T 14-10-2018 AMIS_56180 4bfd8cdeb67320cef2a79cbb416ab52d 728 SUPERFAMILY SSF47781 93 168 8.4E-11 T 14-10-2018 IPR010994 RuvA domain 2-like AMIS_56180 4bfd8cdeb67320cef2a79cbb416ab52d 728 SMART SM00382 344 491 0.004 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_56180 4bfd8cdeb67320cef2a79cbb416ab52d 728 Gene3D G3DSA:1.10.10.2220 193 292 1.8E-26 T 14-10-2018 AMIS_56180 4bfd8cdeb67320cef2a79cbb416ab52d 728 Pfam PF13538 UvrD-like helicase C-terminal domain 652 700 5.9E-20 T 14-10-2018 IPR027785 UvrD-like helicase C-terminal domain AMIS_56180 4bfd8cdeb67320cef2a79cbb416ab52d 728 Gene3D G3DSA:2.30.30.940 576 653 1.7E-144 T 14-10-2018 AMIS_56180 4bfd8cdeb67320cef2a79cbb416ab52d 728 Pfam PF13604 AAA domain 330 508 2.5E-46 T 14-10-2018 AMIS_56180 4bfd8cdeb67320cef2a79cbb416ab52d 728 Hamap MF_01488 ATP-dependent RecD-like DNA helicase [recD2]. 11 726 29.073 T 14-10-2018 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 AMIS_56180 4bfd8cdeb67320cef2a79cbb416ab52d 728 Gene3D G3DSA:1.10.150.20 85 153 3.0E-10 T 14-10-2018 AMIS_56180 4bfd8cdeb67320cef2a79cbb416ab52d 728 Pfam PF14520 Helix-hairpin-helix domain 100 148 1.0E-7 T 14-10-2018 AMIS_56180 4bfd8cdeb67320cef2a79cbb416ab52d 728 TIGRFAM TIGR01448 recD_rel: helicase, RecD/TraA family 18 726 2.6E-206 T 14-10-2018 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 AMIS_56180 4bfd8cdeb67320cef2a79cbb416ab52d 728 Pfam PF14490 Helix-hairpin-helix containing domain 150 240 2.7E-32 T 14-10-2018 IPR029493 RecD helicase-like helix-hairpin-helix domain AMIS_56180 4bfd8cdeb67320cef2a79cbb416ab52d 728 SUPERFAMILY SSF52540 190 488 6.51E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_56180 4bfd8cdeb67320cef2a79cbb416ab52d 728 Gene3D G3DSA:3.40.50.300 319 722 1.7E-144 T 14-10-2018 AMIS_27470 13e09f9b9971de24ce6cab9de5e75d81 112 SMART SM00418 10 87 3.1E-16 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_27470 13e09f9b9971de24ce6cab9de5e75d81 112 SUPERFAMILY SSF46785 4 104 1.25E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_27470 13e09f9b9971de24ce6cab9de5e75d81 112 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 59 74 1.7E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_27470 13e09f9b9971de24ce6cab9de5e75d81 112 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 44 59 1.7E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_27470 13e09f9b9971de24ce6cab9de5e75d81 112 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 12 27 1.7E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_27470 13e09f9b9971de24ce6cab9de5e75d81 112 Gene3D G3DSA:1.10.10.10 3 110 1.3E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_27470 13e09f9b9971de24ce6cab9de5e75d81 112 Pfam PF12840 Helix-turn-helix domain 9 68 1.2E-14 T 14-10-2018 AMIS_74450 b119a58c52ea297a02d0ec778d49b01b 245 Pfam PF13398 Peptidase M50B-like 28 230 2.6E-62 T 14-10-2018 AMIS_41880 547c3cd414acbf482582b1805f14f10f 380 PRINTS PR01182 Ornithine decarboxylase signature 88 112 8.5E-5 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 AMIS_41880 547c3cd414acbf482582b1805f14f10f 380 PRINTS PR01182 Ornithine decarboxylase signature 343 356 8.5E-5 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 AMIS_41880 547c3cd414acbf482582b1805f14f10f 380 PRINTS PR01182 Ornithine decarboxylase signature 46 73 8.5E-5 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 AMIS_41880 547c3cd414acbf482582b1805f14f10f 380 Gene3D G3DSA:3.20.20.10 27 248 4.4E-46 T 14-10-2018 IPR029066 PLP-binding barrel AMIS_41880 547c3cd414acbf482582b1805f14f10f 380 Gene3D G3DSA:2.40.37.10 249 379 3.4E-38 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AMIS_41880 547c3cd414acbf482582b1805f14f10f 380 SUPERFAMILY SSF50621 243 377 1.72E-30 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AMIS_41880 547c3cd414acbf482582b1805f14f10f 380 SUPERFAMILY SSF51419 27 261 3.05E-49 T 14-10-2018 IPR029066 PLP-binding barrel AMIS_41880 547c3cd414acbf482582b1805f14f10f 380 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 27 258 4.2E-27 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 AMIS_41880 547c3cd414acbf482582b1805f14f10f 380 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 22 356 1.5E-13 T 14-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 AMIS_41880 547c3cd414acbf482582b1805f14f10f 380 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 48 66 7.8E-12 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AMIS_41880 547c3cd414acbf482582b1805f14f10f 380 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 248 267 7.8E-12 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AMIS_41880 547c3cd414acbf482582b1805f14f10f 380 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 68 80 7.8E-12 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AMIS_41880 547c3cd414acbf482582b1805f14f10f 380 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 171 184 7.8E-12 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AMIS_21760 97f5443b5cedcb8bb1e00f3ec037ec48 301 SUPERFAMILY SSF51735 2 252 4.45E-60 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_21760 97f5443b5cedcb8bb1e00f3ec037ec48 301 Pfam PF00106 short chain dehydrogenase 5 196 6.6E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_21760 97f5443b5cedcb8bb1e00f3ec037ec48 301 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 8.6E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_21760 97f5443b5cedcb8bb1e00f3ec037ec48 301 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 8.6E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_21760 97f5443b5cedcb8bb1e00f3ec037ec48 301 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 8.6E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_21760 97f5443b5cedcb8bb1e00f3ec037ec48 301 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 215 0.0013 T 14-10-2018 AMIS_21760 97f5443b5cedcb8bb1e00f3ec037ec48 301 Gene3D G3DSA:3.40.50.720 1 290 2.5E-71 T 14-10-2018 AMIS_21760 97f5443b5cedcb8bb1e00f3ec037ec48 301 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 4.1E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_21760 97f5443b5cedcb8bb1e00f3ec037ec48 301 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 4.1E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_21760 97f5443b5cedcb8bb1e00f3ec037ec48 301 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 4.1E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_21760 97f5443b5cedcb8bb1e00f3ec037ec48 301 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 4.1E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_21760 97f5443b5cedcb8bb1e00f3ec037ec48 301 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMIS_25490 a48b7d58d49ea1884e1c454ed34533e9 138 Pfam PF13396 Phospholipase_D-nuclease N-terminal 21 65 2.4E-7 T 14-10-2018 IPR027379 Cardiolipin synthase N-terminal AMIS_74890 944849e8b84deeca2e4b08467b2365a1 306 Pfam PF03631 Virulence factor BrkB 39 277 2.9E-31 T 14-10-2018 IPR017039 Virulence factor BrkB AMIS_74890 944849e8b84deeca2e4b08467b2365a1 306 PIRSF PIRSF035875 16 299 2.4E-19 T 14-10-2018 IPR017039 Virulence factor BrkB AMIS_310 8cd865de5d74f5a91054da1efa788b66 159 SMART SM00347 29 131 1.4E-19 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_310 8cd865de5d74f5a91054da1efa788b66 159 Gene3D G3DSA:1.10.10.10 5 147 1.8E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_310 8cd865de5d74f5a91054da1efa788b66 159 SUPERFAMILY SSF46785 6 146 1.3E-29 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_310 8cd865de5d74f5a91054da1efa788b66 159 Pfam PF12802 MarR family 36 95 2.9E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_27040 46cbb21e43f3fc874d4590a0bece5b2b 187 SUPERFAMILY SSF46689 5 83 1.75E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_27040 46cbb21e43f3fc874d4590a0bece5b2b 187 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 62 2.2E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_27040 46cbb21e43f3fc874d4590a0bece5b2b 187 Gene3D G3DSA:1.10.357.10 11 186 2.4E-29 T 14-10-2018 AMIS_27040 46cbb21e43f3fc874d4590a0bece5b2b 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 7.6E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_27040 46cbb21e43f3fc874d4590a0bece5b2b 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 7.6E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_19340 69be6ea35e6bf796b8b5c04b97c585e0 328 Pfam PF13280 WYL domain 125 294 3.8E-29 T 14-10-2018 IPR026881 WYL domain AMIS_19340 69be6ea35e6bf796b8b5c04b97c585e0 328 PIRSF PIRSF016838 51 302 3.7E-14 T 14-10-2018 IPR028349 Protein PafC AMIS_19340 69be6ea35e6bf796b8b5c04b97c585e0 328 PIRSF PIRSF016838 1 34 2.4 T 14-10-2018 IPR028349 Protein PafC AMIS_19340 69be6ea35e6bf796b8b5c04b97c585e0 328 Gene3D G3DSA:1.10.10.10 1 43 6.7E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_19340 69be6ea35e6bf796b8b5c04b97c585e0 328 SUPERFAMILY SSF46785 1 38 8.74E-6 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_19340 69be6ea35e6bf796b8b5c04b97c585e0 328 Pfam PF08279 HTH domain 2 39 4.0E-11 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 AMIS_23270 0ec599b39b659782c463c81a6ab297fb 588 PRINTS PR00110 Alpha-amylase signature 295 307 1.3E-24 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 AMIS_23270 0ec599b39b659782c463c81a6ab297fb 588 PRINTS PR00110 Alpha-amylase signature 87 104 1.3E-24 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 AMIS_23270 0ec599b39b659782c463c81a6ab297fb 588 PRINTS PR00110 Alpha-amylase signature 119 130 1.3E-24 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 AMIS_23270 0ec599b39b659782c463c81a6ab297fb 588 PRINTS PR00110 Alpha-amylase signature 237 255 1.3E-24 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 AMIS_23270 0ec599b39b659782c463c81a6ab297fb 588 PRINTS PR00110 Alpha-amylase signature 208 219 1.3E-24 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 AMIS_23270 0ec599b39b659782c463c81a6ab297fb 588 Gene3D G3DSA:3.20.20.80 43 386 1.9E-140 T 14-10-2018 AMIS_23270 0ec599b39b659782c463c81a6ab297fb 588 SUPERFAMILY SSF49452 496 587 2.94E-32 T 14-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 AMIS_23270 0ec599b39b659782c463c81a6ab297fb 588 Gene3D G3DSA:2.60.40.1180 387 476 4.9E-33 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta AMIS_23270 0ec599b39b659782c463c81a6ab297fb 588 Pfam PF00686 Starch binding domain 497 581 1.5E-30 T 14-10-2018 IPR002044 Carbohydrate binding module family 20 GO:2001070 AMIS_23270 0ec599b39b659782c463c81a6ab297fb 588 SMART SM01065 492 584 1.7E-30 T 14-10-2018 IPR002044 Carbohydrate binding module family 20 GO:2001070 AMIS_23270 0ec599b39b659782c463c81a6ab297fb 588 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 393 473 1.2E-14 T 14-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 AMIS_23270 0ec599b39b659782c463c81a6ab297fb 588 Gene3D G3DSA:2.60.40.10 482 588 7.3E-35 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_23270 0ec599b39b659782c463c81a6ab297fb 588 SUPERFAMILY SSF51011 386 475 1.38E-31 T 14-10-2018 AMIS_23270 0ec599b39b659782c463c81a6ab297fb 588 SMART SM00642 44 381 3.2E-81 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMIS_23270 0ec599b39b659782c463c81a6ab297fb 588 Pfam PF00128 Alpha amylase, catalytic domain 96 343 1.1E-16 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMIS_23270 0ec599b39b659782c463c81a6ab297fb 588 SUPERFAMILY SSF51445 43 383 9.05E-82 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_23270 0ec599b39b659782c463c81a6ab297fb 588 SMART SM00632 390 476 2.4E-44 T 14-10-2018 IPR031319 Alpha-amylase, C-terminal domain Reactome: R-HSA-189085 AMIS_5060 3629abe6982dc4cb02117e68dc2c3262 231 Gene3D G3DSA:3.20.20.70 1 229 5.4E-91 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_5060 3629abe6982dc4cb02117e68dc2c3262 231 SUPERFAMILY SSF51569 2 219 7.01E-78 T 14-10-2018 AMIS_5060 3629abe6982dc4cb02117e68dc2c3262 231 Pfam PF01791 DeoC/LacD family aldolase 22 203 5.3E-18 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AMIS_5060 3629abe6982dc4cb02117e68dc2c3262 231 SMART SM01133 7 218 2.5E-84 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AMIS_5060 3629abe6982dc4cb02117e68dc2c3262 231 PIRSF PIRSF001357 1 226 1.0E-74 T 14-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AMIS_5060 3629abe6982dc4cb02117e68dc2c3262 231 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 8 215 2.5E-71 T 14-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AMIS_5060 3629abe6982dc4cb02117e68dc2c3262 231 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 6 220 32.117 T 14-10-2018 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 AMIS_66570 6bf2d14abbaa5536a444208906457c23 812 Pfam PF00343 Carbohydrate phosphorylase 105 803 1.2E-294 T 14-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AMIS_66570 6bf2d14abbaa5536a444208906457c23 812 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 16 803 0.0 T 14-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AMIS_66570 6bf2d14abbaa5536a444208906457c23 812 Gene3D G3DSA:3.40.50.2000 9 476 8.6E-189 T 14-10-2018 AMIS_66570 6bf2d14abbaa5536a444208906457c23 812 SUPERFAMILY SSF53756 13 808 1.57E-294 T 14-10-2018 AMIS_66570 6bf2d14abbaa5536a444208906457c23 812 PIRSF PIRSF000460 11 811 9.8E-217 T 14-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AMIS_66570 6bf2d14abbaa5536a444208906457c23 812 Gene3D G3DSA:3.40.50.2000 477 788 4.3E-126 T 14-10-2018 AMIS_66570 6bf2d14abbaa5536a444208906457c23 812 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 652 664 - T 14-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AMIS_30960 319cbd696ef5211ef1e0f922a4c89449 252 Gene3D G3DSA:1.10.3720.10 49 243 1.8E-21 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_30960 319cbd696ef5211ef1e0f922a4c89449 252 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 71 245 4.0E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_30960 319cbd696ef5211ef1e0f922a4c89449 252 SUPERFAMILY SSF161098 50 233 2.09E-25 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_8400 9ddff83e01f4f600efe004309d16fbe8 283 Gene3D G3DSA:3.40.50.1820 70 246 1.3E-10 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_8400 9ddff83e01f4f600efe004309d16fbe8 283 SUPERFAMILY SSF53474 68 258 1.03E-13 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_8400 9ddff83e01f4f600efe004309d16fbe8 283 Pfam PF06259 Alpha/beta hydrolase 50 223 1.4E-45 T 14-10-2018 IPR010427 Protein of unknown function DUF1023 AMIS_34730 3737c78834f58f61f891af54c5ec1526 409 SUPERFAMILY SSF56601 51 401 3.75E-52 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMIS_34730 3737c78834f58f61f891af54c5ec1526 409 Gene3D G3DSA:3.40.710.10 50 387 7.4E-55 T 14-10-2018 AMIS_34730 3737c78834f58f61f891af54c5ec1526 409 Pfam PF00144 Beta-lactamase 54 384 3.7E-41 T 14-10-2018 IPR001466 Beta-lactamase-related AMIS_6220 ce31f2bc0663beaea1c06151775ab549 149 SUPERFAMILY SSF52080 8 147 5.63E-38 T 14-10-2018 IPR036227 Ribosomal L18e/L15P superfamily AMIS_6220 ce31f2bc0663beaea1c06151775ab549 149 ProSitePatterns PS00475 Ribosomal protein L15 signature. 112 143 - T 14-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_6220 ce31f2bc0663beaea1c06151775ab549 149 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 4 146 8.8E-40 T 14-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_6220 ce31f2bc0663beaea1c06151775ab549 149 Gene3D G3DSA:3.100.10.10 71 149 4.5E-23 T 14-10-2018 AMIS_6220 ce31f2bc0663beaea1c06151775ab549 149 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 147 1.5E-29 T 14-10-2018 IPR021131 Ribosomal protein L18e/L15P AMIS_6220 ce31f2bc0663beaea1c06151775ab549 149 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 5 149 18.916 T 14-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 AMIS_79950 f5a70fff057d92af44f6d22fcd0b9e4f 258 Pfam PF02517 CAAX protease self-immunity 150 239 3.3E-13 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 AMIS_76080 29635354951c90092bdb2e5a13478cc7 401 Gene3D G3DSA:3.40.50.200 123 400 5.8E-89 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AMIS_76080 29635354951c90092bdb2e5a13478cc7 401 Gene3D G3DSA:3.30.70.80 46 122 5.9E-14 T 14-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 AMIS_76080 29635354951c90092bdb2e5a13478cc7 401 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 156 167 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site AMIS_76080 29635354951c90092bdb2e5a13478cc7 401 PRINTS PR00723 Subtilisin serine protease family (S8) signature 151 170 7.8E-18 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMIS_76080 29635354951c90092bdb2e5a13478cc7 401 PRINTS PR00723 Subtilisin serine protease family (S8) signature 189 202 7.8E-18 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMIS_76080 29635354951c90092bdb2e5a13478cc7 401 PRINTS PR00723 Subtilisin serine protease family (S8) signature 342 358 7.8E-18 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMIS_76080 29635354951c90092bdb2e5a13478cc7 401 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 193 203 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site AMIS_76080 29635354951c90092bdb2e5a13478cc7 401 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 343 353 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site AMIS_76080 29635354951c90092bdb2e5a13478cc7 401 SUPERFAMILY SSF54897 53 122 9.64E-9 T 14-10-2018 AMIS_76080 29635354951c90092bdb2e5a13478cc7 401 Pfam PF00082 Subtilase family 158 378 1.1E-38 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AMIS_76080 29635354951c90092bdb2e5a13478cc7 401 SUPERFAMILY SSF52743 128 392 4.97E-76 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AMIS_61660 b2eb1fd53715717b827cf4ac23c0d8a3 244 SUPERFAMILY SSF56235 2 239 6.4E-18 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMIS_61660 b2eb1fd53715717b827cf4ac23c0d8a3 244 Gene3D G3DSA:3.60.20.10 2 244 2.4E-81 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMIS_61660 b2eb1fd53715717b827cf4ac23c0d8a3 244 Hamap MF_02036 Gamma-glutamyl-hercynylcysteine sulfoxide hydrolase [egtC]. 1 244 39.936 T 14-10-2018 IPR032889 Gamma-glutamyl-hercynylcysteine sulfoxide hydrolase, Actinobacteria GO:0016811|GO:0052699 KEGG: 00340+3.5.1.118|MetaCyc: PWY-7255 AMIS_61660 b2eb1fd53715717b827cf4ac23c0d8a3 244 Pfam PF13522 Glutamine amidotransferase domain 76 217 4.3E-17 T 14-10-2018 AMIS_61660 b2eb1fd53715717b827cf4ac23c0d8a3 244 TIGRFAM TIGR03442 TIGR03442: ergothioneine biosynthesis protein EgtC 1 242 4.7E-83 T 14-10-2018 IPR017808 Ergothioneine biosynthesis protein EgtC GO:0052699 AMIS_18230 37f1f75ca5a6bee152b700cf74a78071 424 Gene3D G3DSA:3.30.565.10 261 408 2.7E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_18230 37f1f75ca5a6bee152b700cf74a78071 424 SUPERFAMILY SSF47384 176 256 1.37E-11 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_18230 37f1f75ca5a6bee152b700cf74a78071 424 Pfam PF00512 His Kinase A (phospho-acceptor) domain 192 257 2.2E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_18230 37f1f75ca5a6bee152b700cf74a78071 424 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 300 407 1.4E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_18230 37f1f75ca5a6bee152b700cf74a78071 424 SMART SM00388 190 258 5.3E-5 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_18230 37f1f75ca5a6bee152b700cf74a78071 424 SMART SM00065 3 164 0.0012 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_18230 37f1f75ca5a6bee152b700cf74a78071 424 SUPERFAMILY SSF55781 26 161 1.57E-19 T 14-10-2018 AMIS_18230 37f1f75ca5a6bee152b700cf74a78071 424 Gene3D G3DSA:3.30.450.40 21 157 3.3E-12 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_18230 37f1f75ca5a6bee152b700cf74a78071 424 PRINTS PR00344 Bacterial sensor protein C-terminal signature 338 352 4.9E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_18230 37f1f75ca5a6bee152b700cf74a78071 424 PRINTS PR00344 Bacterial sensor protein C-terminal signature 394 407 4.9E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_18230 37f1f75ca5a6bee152b700cf74a78071 424 PRINTS PR00344 Bacterial sensor protein C-terminal signature 370 388 4.9E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_18230 37f1f75ca5a6bee152b700cf74a78071 424 PRINTS PR00344 Bacterial sensor protein C-terminal signature 356 366 4.9E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_18230 37f1f75ca5a6bee152b700cf74a78071 424 Gene3D G3DSA:1.10.287.130 158 256 1.4E-10 T 14-10-2018 AMIS_18230 37f1f75ca5a6bee152b700cf74a78071 424 SUPERFAMILY SSF55874 249 408 1.1E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_18230 37f1f75ca5a6bee152b700cf74a78071 424 SMART SM00387 299 410 2.0E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_73650 1b57478464a59cd017bfb4eb64d4ae1d 108 PRINTS PR00354 7Fe ferredoxin signature 19 29 2.8E-17 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 AMIS_73650 1b57478464a59cd017bfb4eb64d4ae1d 108 PRINTS PR00354 7Fe ferredoxin signature 35 52 2.8E-17 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 AMIS_73650 1b57478464a59cd017bfb4eb64d4ae1d 108 PRINTS PR00354 7Fe ferredoxin signature 9 19 2.8E-17 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 AMIS_73650 1b57478464a59cd017bfb4eb64d4ae1d 108 Gene3D G3DSA:3.30.70.20 2 106 3.6E-45 T 14-10-2018 AMIS_73650 1b57478464a59cd017bfb4eb64d4ae1d 108 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMIS_73650 1b57478464a59cd017bfb4eb64d4ae1d 108 SUPERFAMILY SSF54862 3 92 1.42E-21 T 14-10-2018 AMIS_73650 1b57478464a59cd017bfb4eb64d4ae1d 108 Pfam PF00037 4Fe-4S binding domain 34 55 1.3E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMIS_22620 b585522874b3476353206331a44e33a7 184 SUPERFAMILY SSF52540 4 179 6.69E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_22620 b585522874b3476353206331a44e33a7 184 Pfam PF03029 Conserved hypothetical ATP binding protein 10 177 5.0E-23 T 14-10-2018 IPR004130 GPN-loop GTPase AMIS_22620 b585522874b3476353206331a44e33a7 184 Gene3D G3DSA:3.40.50.300 2 183 2.4E-13 T 14-10-2018 AMIS_15310 6d35c2bc305e46b0b3b22bca427eb053 467 Pfam PF01391 Collagen triple helix repeat (20 copies) 322 368 2.2E-8 T 14-10-2018 IPR008160 Collagen triple helix repeat AMIS_39250 877eff4fad3db334cae5d8675d572950 582 Pfam PF13185 GAF domain 190 332 8.0E-9 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_39250 877eff4fad3db334cae5d8675d572950 582 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 387 574 4.7E-38 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_39250 877eff4fad3db334cae5d8675d572950 582 SUPERFAMILY SSF81606 372 573 2.88E-9 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_39250 877eff4fad3db334cae5d8675d572950 582 SUPERFAMILY SSF55781 22 161 8.46E-27 T 14-10-2018 AMIS_39250 877eff4fad3db334cae5d8675d572950 582 Gene3D G3DSA:3.60.40.10 354 575 3.3E-49 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_39250 877eff4fad3db334cae5d8675d572950 582 SUPERFAMILY SSF55781 193 343 8.74E-16 T 14-10-2018 AMIS_39250 877eff4fad3db334cae5d8675d572950 582 SMART SM00065 191 341 0.0036 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_39250 877eff4fad3db334cae5d8675d572950 582 SMART SM00065 8 166 1.6E-14 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_39250 877eff4fad3db334cae5d8675d572950 582 SMART SM00331 361 575 8.7E-28 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_39250 877eff4fad3db334cae5d8675d572950 582 Gene3D G3DSA:3.30.450.40 7 166 6.9E-23 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_39250 877eff4fad3db334cae5d8675d572950 582 Gene3D G3DSA:3.30.450.40 167 347 1.7E-18 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_39250 877eff4fad3db334cae5d8675d572950 582 Pfam PF01590 GAF domain 24 153 5.1E-12 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_21020 2d6e410b50b083d6d1b86e3fb008dc91 201 Gene3D G3DSA:3.40.50.450 16 195 5.0E-7 T 14-10-2018 AMIS_21020 2d6e410b50b083d6d1b86e3fb008dc91 201 SUPERFAMILY SSF102405 30 153 2.29E-5 T 14-10-2018 AMIS_66600 d318a6024ad95f70eeba5fd57e57cc60 524 SUPERFAMILY SSF50370 179 368 7.99E-13 T 14-10-2018 IPR035992 Ricin B-like lectins AMIS_66600 d318a6024ad95f70eeba5fd57e57cc60 524 Pfam PF00652 Ricin-type beta-trefoil lectin domain 183 299 5.0E-11 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_66600 d318a6024ad95f70eeba5fd57e57cc60 524 Gene3D G3DSA:2.80.10.50 175 315 4.3E-15 T 14-10-2018 AMIS_66600 d318a6024ad95f70eeba5fd57e57cc60 524 SMART SM00458 174 316 0.031 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_66600 d318a6024ad95f70eeba5fd57e57cc60 524 SMART SM00458 330 504 3.4 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_66600 d318a6024ad95f70eeba5fd57e57cc60 524 Gene3D G3DSA:2.80.10.50 330 511 3.5E-17 T 14-10-2018 AMIS_66600 d318a6024ad95f70eeba5fd57e57cc60 524 SUPERFAMILY SSF50370 331 502 6.55E-7 T 14-10-2018 IPR035992 Ricin B-like lectins AMIS_10610 5b468964e3281761e69c691b4b3aa62a 156 SUPERFAMILY SSF46785 23 140 2.66E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_10610 5b468964e3281761e69c691b4b3aa62a 156 Pfam PF01047 MarR family 38 90 3.4E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_10610 5b468964e3281761e69c691b4b3aa62a 156 Gene3D G3DSA:1.10.10.10 4 143 3.1E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_10610 5b468964e3281761e69c691b4b3aa62a 156 SMART SM00347 26 126 3.8E-16 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_68240 426b87789b53c42a6738eb728ac2eab7 265 Hamap MF_00008 Thymidylate synthase [thyA]. 4 265 39.401 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AMIS_68240 426b87789b53c42a6738eb728ac2eab7 265 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 6 88 8.4E-38 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AMIS_68240 426b87789b53c42a6738eb728ac2eab7 265 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 88 265 1.2E-85 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AMIS_68240 426b87789b53c42a6738eb728ac2eab7 265 PRINTS PR00108 Thymidylate synthase family signature 143 158 1.7E-47 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AMIS_68240 426b87789b53c42a6738eb728ac2eab7 265 PRINTS PR00108 Thymidylate synthase family signature 161 187 1.7E-47 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AMIS_68240 426b87789b53c42a6738eb728ac2eab7 265 PRINTS PR00108 Thymidylate synthase family signature 199 216 1.7E-47 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AMIS_68240 426b87789b53c42a6738eb728ac2eab7 265 PRINTS PR00108 Thymidylate synthase family signature 45 66 1.7E-47 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AMIS_68240 426b87789b53c42a6738eb728ac2eab7 265 PRINTS PR00108 Thymidylate synthase family signature 117 136 1.7E-47 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AMIS_68240 426b87789b53c42a6738eb728ac2eab7 265 Pfam PF00303 Thymidylate synthase 6 265 1.9E-119 T 14-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AMIS_68240 426b87789b53c42a6738eb728ac2eab7 265 Gene3D G3DSA:3.30.572.10 4 265 1.8E-124 T 14-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AMIS_68240 426b87789b53c42a6738eb728ac2eab7 265 SUPERFAMILY SSF55831 3 265 1.83E-120 T 14-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AMIS_68240 426b87789b53c42a6738eb728ac2eab7 265 ProSitePatterns PS00091 Thymidylate synthase active site. 128 156 - T 14-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AMIS_61530 c5decb8b173d6fb93693e5ff0ea35850 165 Pfam PF01316 Arginine repressor, DNA binding domain 6 58 4.5E-21 T 14-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 AMIS_61530 c5decb8b173d6fb93693e5ff0ea35850 165 SUPERFAMILY SSF46785 4 65 5.83E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_61530 c5decb8b173d6fb93693e5ff0ea35850 165 TIGRFAM TIGR01529 argR_whole: arginine repressor 9 141 2.0E-41 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AMIS_61530 c5decb8b173d6fb93693e5ff0ea35850 165 Pfam PF02863 Arginine repressor, C-terminal domain 85 140 1.4E-22 T 14-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 AMIS_61530 c5decb8b173d6fb93693e5ff0ea35850 165 Gene3D G3DSA:1.10.10.10 1 72 6.6E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_61530 c5decb8b173d6fb93693e5ff0ea35850 165 Hamap MF_00173 Arginine repressor [argR]. 1 159 54.191 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AMIS_61530 c5decb8b173d6fb93693e5ff0ea35850 165 SUPERFAMILY SSF55252 85 140 8.11E-17 T 14-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 AMIS_61530 c5decb8b173d6fb93693e5ff0ea35850 165 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 93 149 7.0E-15 T 14-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 AMIS_61530 c5decb8b173d6fb93693e5ff0ea35850 165 Gene3D G3DSA:3.30.1360.40 77 155 1.2E-26 T 14-10-2018 AMIS_61530 c5decb8b173d6fb93693e5ff0ea35850 165 PRINTS PR01467 Bacterial arginine repressor signature 93 106 3.5E-27 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AMIS_61530 c5decb8b173d6fb93693e5ff0ea35850 165 PRINTS PR01467 Bacterial arginine repressor signature 25 38 3.5E-27 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AMIS_61530 c5decb8b173d6fb93693e5ff0ea35850 165 PRINTS PR01467 Bacterial arginine repressor signature 41 56 3.5E-27 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AMIS_61530 c5decb8b173d6fb93693e5ff0ea35850 165 PRINTS PR01467 Bacterial arginine repressor signature 123 138 3.5E-27 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AMIS_66530 e7fd2d6ede92cbc4ca119efb8ea11c64 396 Gene3D G3DSA:1.20.1250.20 209 392 4.5E-13 T 14-10-2018 AMIS_66530 e7fd2d6ede92cbc4ca119efb8ea11c64 396 Pfam PF07690 Major Facilitator Superfamily 23 352 1.3E-21 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_66530 e7fd2d6ede92cbc4ca119efb8ea11c64 396 SUPERFAMILY SSF103473 11 392 4.32E-45 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_66530 e7fd2d6ede92cbc4ca119efb8ea11c64 396 Gene3D G3DSA:1.20.1250.20 6 204 9.2E-20 T 14-10-2018 AMIS_39430 91b3e77c75f68f3c31daf99235195d5b 501 SUPERFAMILY SSF51679 7 278 9.27E-57 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_39430 91b3e77c75f68f3c31daf99235195d5b 501 Pfam PF01814 Hemerythrin HHE cation binding domain 348 492 3.4E-19 T 14-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 AMIS_39430 91b3e77c75f68f3c31daf99235195d5b 501 Gene3D G3DSA:1.20.120.520 334 499 1.3E-30 T 14-10-2018 AMIS_39430 91b3e77c75f68f3c31daf99235195d5b 501 Pfam PF00296 Luciferase-like monooxygenase 11 231 2.8E-44 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMIS_39430 91b3e77c75f68f3c31daf99235195d5b 501 Gene3D G3DSA:3.20.20.30 8 321 7.7E-60 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_77740 09d515c5535326dc2c6fab7bceb59343 548 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 27 46 2.6E-10 T 14-10-2018 AMIS_77740 09d515c5535326dc2c6fab7bceb59343 548 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 369 391 2.6E-10 T 14-10-2018 AMIS_77740 09d515c5535326dc2c6fab7bceb59343 548 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 24 520 4.2E-165 T 14-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 AMIS_77740 09d515c5535326dc2c6fab7bceb59343 548 Gene3D G3DSA:1.20.58.100 439 535 3.4E-17 T 14-10-2018 AMIS_77740 09d515c5535326dc2c6fab7bceb59343 548 Gene3D G3DSA:3.50.50.60 26 417 3.6E-150 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_77740 09d515c5535326dc2c6fab7bceb59343 548 Gene3D G3DSA:3.90.700.10 259 372 3.6E-150 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMIS_77740 09d515c5535326dc2c6fab7bceb59343 548 SUPERFAMILY SSF46977 446 538 2.75E-23 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMIS_77740 09d515c5535326dc2c6fab7bceb59343 548 SUPERFAMILY SSF56425 250 366 1.94E-36 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMIS_77740 09d515c5535326dc2c6fab7bceb59343 548 SUPERFAMILY SSF51905 11 423 2.96E-68 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_77740 09d515c5535326dc2c6fab7bceb59343 548 Pfam PF02910 Fumarate reductase flavoprotein C-term 446 532 2.0E-12 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMIS_77740 09d515c5535326dc2c6fab7bceb59343 548 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 26 48 1.1E-5 T 14-10-2018 AMIS_77740 09d515c5535326dc2c6fab7bceb59343 548 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 384 391 1.1E-5 T 14-10-2018 AMIS_77740 09d515c5535326dc2c6fab7bceb59343 548 Pfam PF00890 FAD binding domain 26 406 3.8E-98 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMIS_72420 50017282ac016ce9fb68c4b18a140195 298 Gene3D G3DSA:3.40.50.720 1 134 8.5E-33 T 14-10-2018 AMIS_72420 50017282ac016ce9fb68c4b18a140195 298 SUPERFAMILY SSF55347 143 242 1.8E-8 T 14-10-2018 AMIS_72420 50017282ac016ce9fb68c4b18a140195 298 Gene3D G3DSA:3.30.360.10 135 297 1.1E-14 T 14-10-2018 AMIS_72420 50017282ac016ce9fb68c4b18a140195 298 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 113 8.0E-19 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AMIS_72420 50017282ac016ce9fb68c4b18a140195 298 SUPERFAMILY SSF51735 1 131 1.72E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_3010 32b6abebb4ce16ed346da15a79da9247 317 SUPERFAMILY SSF103481 187 286 1.83E-7 T 14-10-2018 AMIS_3010 32b6abebb4ce16ed346da15a79da9247 317 TIGRFAM TIGR00688 rarD: protein RarD 6 258 1.8E-60 T 14-10-2018 IPR004626 RarD protein GO:0005887 AMIS_3010 32b6abebb4ce16ed346da15a79da9247 317 SUPERFAMILY SSF103481 46 143 1.44E-9 T 14-10-2018 AMIS_3010 32b6abebb4ce16ed346da15a79da9247 317 Pfam PF00892 EamA-like transporter family 6 142 2.8E-12 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMIS_76040 a907d140a5f678acf93e581d30ec0e44 428 Hamap MF_01695 D-inositol-3-phosphate glycosyltransferase [mshA]. 9 414 52.024 T 14-10-2018 IPR017814 Mycothiol biosynthesis protein, MshA GO:0008375|GO:0010125 AMIS_76040 a907d140a5f678acf93e581d30ec0e44 428 TIGRFAM TIGR03449 mycothiol_MshA: D-inositol-3-phosphate glycosyltransferase 10 411 1.8E-193 T 14-10-2018 IPR017814 Mycothiol biosynthesis protein, MshA GO:0008375|GO:0010125 AMIS_76040 a907d140a5f678acf93e581d30ec0e44 428 Gene3D G3DSA:3.40.50.2000 14 406 1.2E-131 T 14-10-2018 AMIS_76040 a907d140a5f678acf93e581d30ec0e44 428 Pfam PF13439 Glycosyltransferase Family 4 29 210 1.2E-32 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AMIS_76040 a907d140a5f678acf93e581d30ec0e44 428 SUPERFAMILY SSF53756 28 409 4.19E-88 T 14-10-2018 AMIS_76040 a907d140a5f678acf93e581d30ec0e44 428 Gene3D G3DSA:3.40.50.2000 206 390 1.2E-131 T 14-10-2018 AMIS_76040 a907d140a5f678acf93e581d30ec0e44 428 Pfam PF00534 Glycosyl transferases group 1 218 386 8.1E-37 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 AMIS_18270 ef6f8bdfce2b206a1da32a982feee017 212 SUPERFAMILY SSF55729 125 188 9.53E-12 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_18270 ef6f8bdfce2b206a1da32a982feee017 212 Pfam PF00583 Acetyltransferase (GNAT) family 107 180 2.4E-5 T 14-10-2018 IPR000182 GNAT domain AMIS_18270 ef6f8bdfce2b206a1da32a982feee017 212 Gene3D G3DSA:3.40.630.30 1 200 2.1E-33 T 14-10-2018 AMIS_18270 ef6f8bdfce2b206a1da32a982feee017 212 SUPERFAMILY SSF55729 2 188 6.22E-12 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_22650 997ac5b1acc5b0ae5693958215ccc4ef 778 SUPERFAMILY SSF55874 494 618 5.5E-16 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_22650 997ac5b1acc5b0ae5693958215ccc4ef 778 SMART SM00387 507 620 3.7E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_22650 997ac5b1acc5b0ae5693958215ccc4ef 778 Pfam PF08376 Nitrate and nitrite sensing 45 272 1.1E-26 T 14-10-2018 IPR013587 Nitrate/nitrite sensing protein AMIS_22650 997ac5b1acc5b0ae5693958215ccc4ef 778 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 512 606 6.3E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_22650 997ac5b1acc5b0ae5693958215ccc4ef 778 Gene3D G3DSA:3.30.565.10 472 618 1.0E-13 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_80020 a0e665ae10546c1e483283d04e850664 338 Gene3D G3DSA:3.90.1720.10 177 334 6.2E-39 T 14-10-2018 AMIS_80020 a0e665ae10546c1e483283d04e850664 338 Pfam PF00877 NlpC/P60 family 242 328 1.7E-19 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain AMIS_80020 a0e665ae10546c1e483283d04e850664 338 SUPERFAMILY SSF54001 228 328 5.89E-31 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily AMIS_43230 33d19ae970720f5fa42cb45244f8e34e 266 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_43230 33d19ae970720f5fa42cb45244f8e34e 266 Gene3D G3DSA:3.40.50.300 9 242 2.4E-56 T 14-10-2018 AMIS_43230 33d19ae970720f5fa42cb45244f8e34e 266 Pfam PF00005 ABC transporter 44 177 2.3E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_43230 33d19ae970720f5fa42cb45244f8e34e 266 SMART SM00382 41 226 3.4E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_43230 33d19ae970720f5fa42cb45244f8e34e 266 SUPERFAMILY SSF52540 18 238 3.69E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_56640 01f493ea60ab9b297a2bbfba325f1be2 748 Pfam PF00563 EAL domain 490 723 6.4E-61 T 14-10-2018 IPR001633 EAL domain AMIS_56640 01f493ea60ab9b297a2bbfba325f1be2 748 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 307 471 8.4E-41 T 14-10-2018 IPR000160 GGDEF domain AMIS_56640 01f493ea60ab9b297a2bbfba325f1be2 748 Gene3D G3DSA:3.30.70.270 305 485 1.2E-53 T 14-10-2018 AMIS_56640 01f493ea60ab9b297a2bbfba325f1be2 748 SMART SM00052 483 728 1.8E-71 T 14-10-2018 IPR001633 EAL domain AMIS_56640 01f493ea60ab9b297a2bbfba325f1be2 748 SUPERFAMILY SSF141868 496 734 8.63E-69 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_56640 01f493ea60ab9b297a2bbfba325f1be2 748 SMART SM00267 300 473 2.2E-59 T 14-10-2018 IPR000160 GGDEF domain AMIS_56640 01f493ea60ab9b297a2bbfba325f1be2 748 SUPERFAMILY SSF55073 316 474 5.96E-45 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_56640 01f493ea60ab9b297a2bbfba325f1be2 748 Pfam PF00990 Diguanylate cyclase, GGDEF domain 311 468 2.1E-44 T 14-10-2018 IPR000160 GGDEF domain AMIS_56640 01f493ea60ab9b297a2bbfba325f1be2 748 Gene3D G3DSA:3.20.20.450 486 740 2.9E-78 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_27120 028b49b8d75cfddfcf3136de2b92029b 389 Gene3D G3DSA:1.20.140.10 235 387 1.8E-49 T 14-10-2018 AMIS_27120 028b49b8d75cfddfcf3136de2b92029b 389 Gene3D G3DSA:1.10.540.10 1 124 6.8E-23 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMIS_27120 028b49b8d75cfddfcf3136de2b92029b 389 SUPERFAMILY SSF47203 228 382 5.96E-52 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMIS_27120 028b49b8d75cfddfcf3136de2b92029b 389 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 337 356 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AMIS_27120 028b49b8d75cfddfcf3136de2b92029b 389 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 230 379 3.4E-47 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMIS_27120 028b49b8d75cfddfcf3136de2b92029b 389 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 122 1.3E-18 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMIS_27120 028b49b8d75cfddfcf3136de2b92029b 389 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 126 217 7.8E-23 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMIS_27120 028b49b8d75cfddfcf3136de2b92029b 389 SUPERFAMILY SSF56645 2 243 6.94E-70 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMIS_27120 028b49b8d75cfddfcf3136de2b92029b 389 Gene3D G3DSA:2.40.110.10 125 234 3.1E-39 T 14-10-2018 AMIS_33130 bce600664067964291a51ffad8a9b919 247 Pfam PF01545 Cation efflux family 33 198 3.2E-10 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AMIS_33130 bce600664067964291a51ffad8a9b919 247 Gene3D G3DSA:1.20.1510.10 22 204 3.5E-16 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AMIS_33130 bce600664067964291a51ffad8a9b919 247 SUPERFAMILY SSF161111 20 202 1.29E-30 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AMIS_73310 820708b5580701b951193201a7f559d5 454 Pfam PF03109 ABC1 family 112 237 8.0E-26 T 14-10-2018 IPR004147 UbiB domain AMIS_73310 820708b5580701b951193201a7f559d5 454 SUPERFAMILY SSF56112 95 317 1.56E-24 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMIS_68980 17c1541c941838bcfccfcf4cc02b3082 304 Pfam PF01678 Diaminopimelate epimerase 31 158 1.1E-31 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AMIS_68980 17c1541c941838bcfccfcf4cc02b3082 304 Pfam PF01678 Diaminopimelate epimerase 177 300 1.8E-17 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AMIS_68980 17c1541c941838bcfccfcf4cc02b3082 304 SUPERFAMILY SSF54506 167 303 1.92E-27 T 14-10-2018 AMIS_68980 17c1541c941838bcfccfcf4cc02b3082 304 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 30 303 2.8E-62 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AMIS_68980 17c1541c941838bcfccfcf4cc02b3082 304 Gene3D G3DSA:3.10.310.10 31 167 1.3E-80 T 14-10-2018 AMIS_68980 17c1541c941838bcfccfcf4cc02b3082 304 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 100 114 - T 14-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AMIS_68980 17c1541c941838bcfccfcf4cc02b3082 304 SUPERFAMILY SSF54506 29 160 2.39E-33 T 14-10-2018 AMIS_68980 17c1541c941838bcfccfcf4cc02b3082 304 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 29 304 27.621 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AMIS_68980 17c1541c941838bcfccfcf4cc02b3082 304 Gene3D G3DSA:3.10.310.10 168 301 1.3E-80 T 14-10-2018 AMIS_45440 7dbff7df82c5cb1313d997d140dd40b1 388 Gene3D G3DSA:3.40.50.2000 95 380 3.5E-51 T 14-10-2018 AMIS_45440 7dbff7df82c5cb1313d997d140dd40b1 388 SUPERFAMILY SSF53756 3 384 1.73E-64 T 14-10-2018 AMIS_45440 7dbff7df82c5cb1313d997d140dd40b1 388 Pfam PF00534 Glycosyl transferases group 1 210 363 6.4E-36 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 AMIS_45440 7dbff7df82c5cb1313d997d140dd40b1 388 Gene3D G3DSA:3.40.50.2000 198 369 3.5E-51 T 14-10-2018 AMIS_45910 23d19da57f7a6145ec5f146ab84cfce7 899 Gene3D G3DSA:3.40.50.300 1 147 4.6E-5 T 14-10-2018 AMIS_45910 23d19da57f7a6145ec5f146ab84cfce7 899 Pfam PF00196 Bacterial regulatory proteins, luxR family 844 894 1.9E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_45910 23d19da57f7a6145ec5f146ab84cfce7 899 Gene3D G3DSA:1.25.40.10 613 774 2.3E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_45910 23d19da57f7a6145ec5f146ab84cfce7 899 SUPERFAMILY SSF52540 2 142 1.66E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_45910 23d19da57f7a6145ec5f146ab84cfce7 899 SUPERFAMILY SSF46894 833 896 1.53E-14 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_45910 23d19da57f7a6145ec5f146ab84cfce7 899 SMART SM00421 841 898 7.5E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_45910 23d19da57f7a6145ec5f146ab84cfce7 899 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 844 858 1.4E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_45910 23d19da57f7a6145ec5f146ab84cfce7 899 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 858 874 1.4E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_45910 23d19da57f7a6145ec5f146ab84cfce7 899 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 874 886 1.4E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_45910 23d19da57f7a6145ec5f146ab84cfce7 899 Gene3D G3DSA:1.10.10.10 793 899 1.2E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_63690 1e54fe7e9acd3bacf8886b1d4f692a0a 198 SUPERFAMILY SSF55729 40 151 1.01E-11 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_63690 1e54fe7e9acd3bacf8886b1d4f692a0a 198 Gene3D G3DSA:3.40.630.30 27 187 5.3E-14 T 14-10-2018 AMIS_63690 1e54fe7e9acd3bacf8886b1d4f692a0a 198 Pfam PF00583 Acetyltransferase (GNAT) family 64 150 1.9E-6 T 14-10-2018 IPR000182 GNAT domain AMIS_7750 e98ee12d8c9f2f41043fdff99912766c 414 ProSitePatterns PS00737 Thiolases signature 2. 359 375 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 AMIS_7750 e98ee12d8c9f2f41043fdff99912766c 414 Pfam PF02803 Thiolase, C-terminal domain 291 412 9.9E-48 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 AMIS_7750 e98ee12d8c9f2f41043fdff99912766c 414 SUPERFAMILY SSF53901 291 412 4.16E-43 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_7750 e98ee12d8c9f2f41043fdff99912766c 414 PIRSF PIRSF000429 1 414 2.9E-123 T 14-10-2018 IPR002155 Thiolase GO:0016747 AMIS_7750 e98ee12d8c9f2f41043fdff99912766c 414 SUPERFAMILY SSF53901 3 290 9.77E-63 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_7750 e98ee12d8c9f2f41043fdff99912766c 414 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 411 1.4E-131 T 14-10-2018 IPR002155 Thiolase GO:0016747 AMIS_7750 e98ee12d8c9f2f41043fdff99912766c 414 Pfam PF00108 Thiolase, N-terminal domain 5 282 2.2E-58 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 AMIS_15250 9e5fd21c7589153b83e6f3167d7dc169 255 Pfam PF03799 Cell division protein FtsQ 143 240 6.6E-9 T 14-10-2018 IPR005548 Cell division protein FtsQ/DivIB AMIS_15250 9e5fd21c7589153b83e6f3167d7dc169 255 Gene3D G3DSA:3.10.20.310 64 131 2.6E-7 T 14-10-2018 AMIS_15250 9e5fd21c7589153b83e6f3167d7dc169 255 Pfam PF08478 POTRA domain, FtsQ-type 65 132 9.6E-18 T 14-10-2018 IPR013685 POTRA domain, FtsQ-type AMIS_42210 12370053415f98893713c80dbbe17b42 427 SUPERFAMILY SSF103473 20 407 3.92E-39 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_42210 12370053415f98893713c80dbbe17b42 427 Pfam PF07690 Major Facilitator Superfamily 23 327 7.0E-18 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_42210 12370053415f98893713c80dbbe17b42 427 Gene3D G3DSA:1.20.1250.20 12 400 2.8E-31 T 14-10-2018 AMIS_33480 59d2ec144c375dbef3a6e5d86c6d2c10 342 ProSitePatterns PS00777 Glycosyl hydrolases family 11 (GH11) active site signature 2. 220 231 - T 14-10-2018 IPR033119 Glycoside hydrolase family 11, active site 2 MetaCyc: PWY-6717|MetaCyc: PWY-6784 AMIS_33480 59d2ec144c375dbef3a6e5d86c6d2c10 342 ProSitePatterns PS00776 Glycosyl hydrolases family 11 (GH11) active site signature 1. 128 138 - T 14-10-2018 IPR018208 Glycoside hydrolase family 11, active site 1 MetaCyc: PWY-6717|MetaCyc: PWY-6784 AMIS_33480 59d2ec144c375dbef3a6e5d86c6d2c10 342 SMART SM00637 258 339 5.4E-13 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 AMIS_33480 59d2ec144c375dbef3a6e5d86c6d2c10 342 SUPERFAMILY SSF49899 47 235 3.28E-72 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily AMIS_33480 59d2ec144c375dbef3a6e5d86c6d2c10 342 SUPERFAMILY SSF49384 256 339 6.98E-18 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 AMIS_33480 59d2ec144c375dbef3a6e5d86c6d2c10 342 Pfam PF00457 Glycosyl hydrolases family 11 55 234 1.0E-74 T 14-10-2018 IPR033123 Glycosyl hydrolases family 11 (GH11) domain MetaCyc: PWY-6717|MetaCyc: PWY-6784 AMIS_33480 59d2ec144c375dbef3a6e5d86c6d2c10 342 Gene3D G3DSA:2.60.40.290 255 342 2.2E-20 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 AMIS_33480 59d2ec144c375dbef3a6e5d86c6d2c10 342 Gene3D G3DSA:2.60.120.180 40 241 1.4E-74 T 14-10-2018 IPR013319 Glycoside hydrolase family 11/12 GO:0004553 MetaCyc: PWY-6717|MetaCyc: PWY-6784 AMIS_33480 59d2ec144c375dbef3a6e5d86c6d2c10 342 PRINTS PR00911 Glycosyl hydrolase family 11 signature 176 181 3.4E-17 T 14-10-2018 IPR001137 Glycoside hydrolase family 11 GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 AMIS_33480 59d2ec144c375dbef3a6e5d86c6d2c10 342 PRINTS PR00911 Glycosyl hydrolase family 11 signature 204 212 3.4E-17 T 14-10-2018 IPR001137 Glycoside hydrolase family 11 GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 AMIS_33480 59d2ec144c375dbef3a6e5d86c6d2c10 342 PRINTS PR00911 Glycosyl hydrolase family 11 signature 156 162 3.4E-17 T 14-10-2018 IPR001137 Glycoside hydrolase family 11 GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 AMIS_33480 59d2ec144c375dbef3a6e5d86c6d2c10 342 PRINTS PR00911 Glycosyl hydrolase family 11 signature 128 138 3.4E-17 T 14-10-2018 IPR001137 Glycoside hydrolase family 11 GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 AMIS_33480 59d2ec144c375dbef3a6e5d86c6d2c10 342 PRINTS PR00911 Glycosyl hydrolase family 11 signature 118 127 3.4E-17 T 14-10-2018 IPR001137 Glycoside hydrolase family 11 GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 AMIS_33480 59d2ec144c375dbef3a6e5d86c6d2c10 342 PRINTS PR00911 Glycosyl hydrolase family 11 signature 181 190 3.4E-17 T 14-10-2018 IPR001137 Glycoside hydrolase family 11 GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 AMIS_52350 7a68ba12ed5a2dac2bb66fdef115fd7b 225 Gene3D G3DSA:3.40.50.300 6 225 7.8E-67 T 14-10-2018 AMIS_52350 7a68ba12ed5a2dac2bb66fdef115fd7b 225 SMART SM00382 36 223 1.2E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_52350 7a68ba12ed5a2dac2bb66fdef115fd7b 225 Pfam PF00005 ABC transporter 27 175 6.1E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_52350 7a68ba12ed5a2dac2bb66fdef115fd7b 225 SUPERFAMILY SSF52540 8 224 7.28E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_52350 7a68ba12ed5a2dac2bb66fdef115fd7b 225 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_11040 9e19b0a311ab03f671062a460a5c88dc 186 SUPERFAMILY SSF52980 21 164 1.23E-18 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AMIS_11040 9e19b0a311ab03f671062a460a5c88dc 186 Pfam PF05685 Putative restriction endonuclease 29 177 1.3E-26 T 14-10-2018 IPR008538 Domain of unknown function DUF820 AMIS_11040 9e19b0a311ab03f671062a460a5c88dc 186 Gene3D G3DSA:3.90.1570.10 18 174 1.6E-14 T 14-10-2018 AMIS_31250 b5b730ed6c549f3f555564b0bbce049e 466 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 3 25 5.0E-6 T 14-10-2018 AMIS_31250 b5b730ed6c549f3f555564b0bbce049e 466 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 166 181 5.0E-6 T 14-10-2018 AMIS_31250 b5b730ed6c549f3f555564b0bbce049e 466 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 306 321 5.0E-6 T 14-10-2018 AMIS_31250 b5b730ed6c549f3f555564b0bbce049e 466 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 321 337 5.0E-6 T 14-10-2018 AMIS_31250 b5b730ed6c549f3f555564b0bbce049e 466 Gene3D G3DSA:3.50.50.60 2 395 1.0E-29 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_31250 b5b730ed6c549f3f555564b0bbce049e 466 SUPERFAMILY SSF51905 2 368 3.51E-29 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_31250 b5b730ed6c549f3f555564b0bbce049e 466 Pfam PF04820 Tryptophan halogenase 123 182 9.8E-6 T 14-10-2018 IPR006905 Flavin-dependent halogenase AMIS_19050 0c9d195560255f6d4f356fe17f73baef 402 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 218 275 1.5E-13 T 14-10-2018 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal AMIS_19050 0c9d195560255f6d4f356fe17f73baef 402 SUPERFAMILY SSF54637 291 374 3.92E-12 T 14-10-2018 IPR029069 HotDog domain superfamily AMIS_19050 0c9d195560255f6d4f356fe17f73baef 402 Pfam PF13452 N-terminal half of MaoC dehydratase 22 143 9.9E-11 T 14-10-2018 IPR039569 N-terminal of MaoC-like dehydratase Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241|Reactome: R-HSA-9033500 AMIS_19050 0c9d195560255f6d4f356fe17f73baef 402 Gene3D G3DSA:3.10.129.10 1 165 8.0E-50 T 14-10-2018 AMIS_19050 0c9d195560255f6d4f356fe17f73baef 402 SUPERFAMILY SSF50249 164 276 1.4E-29 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMIS_19050 0c9d195560255f6d4f356fe17f73baef 402 Gene3D G3DSA:3.10.129.10 287 401 1.6E-21 T 14-10-2018 AMIS_19050 0c9d195560255f6d4f356fe17f73baef 402 SUPERFAMILY SSF54637 27 153 2.34E-9 T 14-10-2018 IPR029069 HotDog domain superfamily AMIS_19050 0c9d195560255f6d4f356fe17f73baef 402 Pfam PF01575 MaoC like domain 293 381 1.5E-6 T 14-10-2018 IPR002539 MaoC-like dehydratase domain AMIS_19050 0c9d195560255f6d4f356fe17f73baef 402 Pfam PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) 178 211 2.0E-11 T 14-10-2018 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal AMIS_72390 c9c1a0a56ce30782b99aec437c421522 329 SUPERFAMILY SSF46689 276 327 1.98E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_72390 c9c1a0a56ce30782b99aec437c421522 329 SMART SM00342 239 325 4.2E-26 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMIS_72390 c9c1a0a56ce30782b99aec437c421522 329 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 276 321 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AMIS_72390 c9c1a0a56ce30782b99aec437c421522 329 Pfam PF14525 AraC-binding-like domain 26 203 5.7E-27 T 14-10-2018 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like AMIS_72390 c9c1a0a56ce30782b99aec437c421522 329 SUPERFAMILY SSF46689 223 274 1.4E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_72390 c9c1a0a56ce30782b99aec437c421522 329 Pfam PF12833 Helix-turn-helix domain 245 327 5.4E-27 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMIS_72390 c9c1a0a56ce30782b99aec437c421522 329 Gene3D G3DSA:1.10.10.60 223 328 5.0E-35 T 14-10-2018 AMIS_52380 604ebaa0c1dd7299b47db1c65a1305ac 207 Pfam PF00188 Cysteine-rich secretory protein family 87 203 8.2E-18 T 14-10-2018 IPR014044 CAP domain AMIS_52380 604ebaa0c1dd7299b47db1c65a1305ac 207 SUPERFAMILY SSF55797 79 204 1.31E-23 T 14-10-2018 IPR035940 CAP superfamily AMIS_52380 604ebaa0c1dd7299b47db1c65a1305ac 207 Gene3D G3DSA:3.40.33.10 56 204 3.9E-46 T 14-10-2018 IPR035940 CAP superfamily AMIS_12870 748ae58005cb075188ceecf29ed44642 147 SUPERFAMILY SSF52799 37 144 1.36E-20 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like AMIS_12870 748ae58005cb075188ceecf29ed44642 147 Gene3D G3DSA:3.90.190.10 30 147 1.1E-18 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like AMIS_12870 748ae58005cb075188ceecf29ed44642 147 Pfam PF00102 Protein-tyrosine phosphatase 55 120 8.4E-5 T 14-10-2018 IPR000242 PTP type protein phosphatase GO:0004725|GO:0006470 AMIS_6120 23e602608efdbe0bbc5fdee5fe4e06c1 91 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 13 84 3.0E-34 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_6120 23e602608efdbe0bbc5fdee5fe4e06c1 91 SUPERFAMILY SSF50249 13 90 5.57E-30 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMIS_6120 23e602608efdbe0bbc5fdee5fe4e06c1 91 Gene3D G3DSA:2.40.50.140 12 91 1.2E-33 T 14-10-2018 AMIS_6120 23e602608efdbe0bbc5fdee5fe4e06c1 91 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 13 88 24.801 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_6120 23e602608efdbe0bbc5fdee5fe4e06c1 91 PRINTS PR00973 Ribosomal protein S17 family signature 74 81 2.1E-11 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_6120 23e602608efdbe0bbc5fdee5fe4e06c1 91 PRINTS PR00973 Ribosomal protein S17 family signature 32 55 2.1E-11 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_6120 23e602608efdbe0bbc5fdee5fe4e06c1 91 PRINTS PR00973 Ribosomal protein S17 family signature 64 74 2.1E-11 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_6120 23e602608efdbe0bbc5fdee5fe4e06c1 91 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 13 84 3.0E-31 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_6120 23e602608efdbe0bbc5fdee5fe4e06c1 91 Pfam PF00366 Ribosomal protein S17 18 85 2.2E-30 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_3260 0d40d92f9bfbf2e1ada0bb25822dd6be 803 PIRSF PIRSF001265 17 738 1.1E-248 T 14-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AMIS_3260 0d40d92f9bfbf2e1ada0bb25822dd6be 803 Hamap MF_01129 Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 22 731 24.4 T 14-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AMIS_3260 0d40d92f9bfbf2e1ada0bb25822dd6be 803 TIGRFAM TIGR01104 V_PPase: V-type H(+)-translocating pyrophosphatase 24 731 1.6E-203 T 14-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AMIS_3260 0d40d92f9bfbf2e1ada0bb25822dd6be 803 Pfam PF03030 Inorganic H+ pyrophosphatase 33 726 1.4E-239 T 14-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AMIS_68460 68c91fe2ba9c3bad5bfd88bcbf36fdcb 221 SUPERFAMILY SSF116726 147 212 1.96E-5 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AMIS_68460 68c91fe2ba9c3bad5bfd88bcbf36fdcb 221 Pfam PF02254 TrkA-N domain 3 116 1.9E-25 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AMIS_68460 68c91fe2ba9c3bad5bfd88bcbf36fdcb 221 SUPERFAMILY SSF51735 2 140 1.44E-29 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_68460 68c91fe2ba9c3bad5bfd88bcbf36fdcb 221 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 6.4E-10 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AMIS_68460 68c91fe2ba9c3bad5bfd88bcbf36fdcb 221 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 6.4E-10 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AMIS_68460 68c91fe2ba9c3bad5bfd88bcbf36fdcb 221 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 6.4E-10 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AMIS_68460 68c91fe2ba9c3bad5bfd88bcbf36fdcb 221 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 6.4E-10 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AMIS_68460 68c91fe2ba9c3bad5bfd88bcbf36fdcb 221 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 6.4E-10 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AMIS_68460 68c91fe2ba9c3bad5bfd88bcbf36fdcb 221 Gene3D G3DSA:3.30.70.1450 134 215 5.8E-6 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AMIS_68460 68c91fe2ba9c3bad5bfd88bcbf36fdcb 221 Gene3D G3DSA:3.40.50.720 1 133 1.5E-34 T 14-10-2018 AMIS_68460 68c91fe2ba9c3bad5bfd88bcbf36fdcb 221 Pfam PF02080 TrkA-C domain 156 211 1.1E-6 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AMIS_16040 c461acbeabbbb40d00b9e2bb98d66036 980 SUPERFAMILY SSF52540 5 575 1.33E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_16040 c461acbeabbbb40d00b9e2bb98d66036 980 ProSitePatterns PS00211 ABC transporters family signature. 493 507 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_16040 c461acbeabbbb40d00b9e2bb98d66036 980 Pfam PF00005 ABC transporter 629 865 4.0E-10 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_16040 c461acbeabbbb40d00b9e2bb98d66036 980 ProSitePatterns PS00211 ABC transporters family signature. 835 849 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_16040 c461acbeabbbb40d00b9e2bb98d66036 980 Gene3D G3DSA:3.40.50.300 7 601 1.6E-260 T 14-10-2018 AMIS_16040 c461acbeabbbb40d00b9e2bb98d66036 980 Gene3D G3DSA:1.20.1580.10 697 835 2.1E-144 T 14-10-2018 AMIS_16040 c461acbeabbbb40d00b9e2bb98d66036 980 Hamap MF_00205 UvrABC system protein A [uvrA]. 2 945 22.802 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 AMIS_16040 c461acbeabbbb40d00b9e2bb98d66036 980 SUPERFAMILY SSF52540 624 914 1.21E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_16040 c461acbeabbbb40d00b9e2bb98d66036 980 Gene3D G3DSA:1.20.1580.10 91 498 1.6E-260 T 14-10-2018 AMIS_16040 c461acbeabbbb40d00b9e2bb98d66036 980 Gene3D G3DSA:3.30.190.20 131 248 1.6E-260 T 14-10-2018 AMIS_16040 c461acbeabbbb40d00b9e2bb98d66036 980 Gene3D G3DSA:1.10.8.280 292 409 1.6E-260 T 14-10-2018 AMIS_16040 c461acbeabbbb40d00b9e2bb98d66036 980 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 5 930 0.0 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 AMIS_16040 c461acbeabbbb40d00b9e2bb98d66036 980 Gene3D G3DSA:3.40.50.300 622 941 2.1E-144 T 14-10-2018 AMIS_74850 9e9fd678d23e92e355a0b84c33a8082d 493 Gene3D G3DSA:3.40.50.300 242 477 2.5E-39 T 14-10-2018 AMIS_74850 9e9fd678d23e92e355a0b84c33a8082d 493 SUPERFAMILY SSF52540 242 475 2.85E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_74850 9e9fd678d23e92e355a0b84c33a8082d 493 Pfam PF00005 ABC transporter 4 155 2.8E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_74850 9e9fd678d23e92e355a0b84c33a8082d 493 SMART SM00382 267 471 8.1 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_74850 9e9fd678d23e92e355a0b84c33a8082d 493 SMART SM00382 12 203 6.5E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_74850 9e9fd678d23e92e355a0b84c33a8082d 493 ProSitePatterns PS00211 ABC transporters family signature. 387 401 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_74850 9e9fd678d23e92e355a0b84c33a8082d 493 Pfam PF00005 ABC transporter 259 414 1.6E-17 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_74850 9e9fd678d23e92e355a0b84c33a8082d 493 Gene3D G3DSA:3.40.50.300 1 219 3.2E-52 T 14-10-2018 AMIS_74850 9e9fd678d23e92e355a0b84c33a8082d 493 SUPERFAMILY SSF52540 2 212 2.05E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_77220 7922aa49ea55d5d11e0387ba6474b5bf 476 Pfam PF13365 Trypsin-like peptidase domain 293 452 6.4E-16 T 14-10-2018 AMIS_77220 7922aa49ea55d5d11e0387ba6474b5bf 476 Gene3D G3DSA:2.40.10.10 280 373 1.0E-16 T 14-10-2018 AMIS_77220 7922aa49ea55d5d11e0387ba6474b5bf 476 SUPERFAMILY SSF50494 273 458 3.77E-24 T 14-10-2018 IPR009003 Peptidase S1, PA clan AMIS_77220 7922aa49ea55d5d11e0387ba6474b5bf 476 Gene3D G3DSA:2.40.10.10 374 456 1.0E-16 T 14-10-2018 AMIS_22310 db90ab8b3815fe13525f201a544b4202 481 SUPERFAMILY SSF69318 167 452 2.09E-26 T 14-10-2018 AMIS_22310 db90ab8b3815fe13525f201a544b4202 481 Gene3D G3DSA:3.90.1720.10 5 172 6.4E-6 T 14-10-2018 AMIS_20450 2dc197b62358470ee5a99a0d70e0fa31 102 SUPERFAMILY SSF47413 32 72 1.72E-7 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_20450 2dc197b62358470ee5a99a0d70e0fa31 102 Pfam PF13560 Helix-turn-helix domain 33 84 3.5E-7 T 14-10-2018 AMIS_20450 2dc197b62358470ee5a99a0d70e0fa31 102 Gene3D G3DSA:1.10.260.40 28 87 5.5E-10 T 14-10-2018 AMIS_43970 ab647279c02752ca196e51438e143833 304 Gene3D G3DSA:2.160.20.10 19 304 3.8E-93 T 14-10-2018 IPR012334 Pectin lyase fold AMIS_43970 ab647279c02752ca196e51438e143833 304 SMART SM00710 201 223 730.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMIS_43970 ab647279c02752ca196e51438e143833 304 SMART SM00710 122 144 810.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMIS_43970 ab647279c02752ca196e51438e143833 304 SMART SM00710 224 246 4500.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMIS_43970 ab647279c02752ca196e51438e143833 304 SMART SM00710 98 120 39.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMIS_43970 ab647279c02752ca196e51438e143833 304 SUPERFAMILY SSF51126 23 303 4.4E-76 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor AMIS_43970 ab647279c02752ca196e51438e143833 304 Pfam PF00544 Pectate lyase 68 234 1.9E-35 T 14-10-2018 IPR002022 Pectate lyase AMIS_43970 ab647279c02752ca196e51438e143833 304 SMART SM00656 34 240 1.5E-38 T 14-10-2018 IPR002022 Pectate lyase AMIS_35550 26aa7645a0451ab936552b9e2f4e8075 145 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 21 136 8.8E-32 T 14-10-2018 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III AMIS_11790 0c034b4013a8702963201817e9e0cf16 115 Gene3D G3DSA:3.30.428.10 1 109 2.1E-33 T 14-10-2018 IPR036265 HIT-like superfamily AMIS_11790 0c034b4013a8702963201817e9e0cf16 115 Pfam PF01230 HIT domain 13 106 2.4E-22 T 14-10-2018 IPR001310 Histidine triad (HIT) protein AMIS_11790 0c034b4013a8702963201817e9e0cf16 115 SUPERFAMILY SSF54197 2 111 2.47E-31 T 14-10-2018 IPR036265 HIT-like superfamily AMIS_11790 0c034b4013a8702963201817e9e0cf16 115 PRINTS PR00332 Histidine triad family signature 27 45 1.0E-16 T 14-10-2018 IPR001310 Histidine triad (HIT) protein AMIS_11790 0c034b4013a8702963201817e9e0cf16 115 PRINTS PR00332 Histidine triad family signature 6 22 1.0E-16 T 14-10-2018 IPR001310 Histidine triad (HIT) protein AMIS_11790 0c034b4013a8702963201817e9e0cf16 115 PRINTS PR00332 Histidine triad family signature 93 103 1.0E-16 T 14-10-2018 IPR001310 Histidine triad (HIT) protein AMIS_46310 c74f781169bcb223e9e262b58e6e35be 276 Gene3D G3DSA:3.90.226.10 6 274 8.4E-63 T 14-10-2018 AMIS_46310 c74f781169bcb223e9e262b58e6e35be 276 SUPERFAMILY SSF52096 7 253 1.88E-50 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMIS_46310 c74f781169bcb223e9e262b58e6e35be 276 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 104 124 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 AMIS_46310 c74f781169bcb223e9e262b58e6e35be 276 Pfam PF00378 Enoyl-CoA hydratase/isomerase 18 217 1.7E-29 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AMIS_13300 ba7e49f35037ab87fb788eb769b38038 425 Pfam PF00704 Glycosyl hydrolases family 18 35 411 1.1E-83 T 14-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 AMIS_13300 ba7e49f35037ab87fb788eb769b38038 425 SMART SM00636 32 411 1.8E-115 T 14-10-2018 IPR011583 Chitinase II GO:0008061 AMIS_13300 ba7e49f35037ab87fb788eb769b38038 425 Gene3D G3DSA:3.10.50.10 324 392 1.1E-134 T 14-10-2018 IPR029070 Chitinase insertion domain superfamily AMIS_13300 ba7e49f35037ab87fb788eb769b38038 425 Gene3D G3DSA:3.20.20.80 35 418 1.1E-134 T 14-10-2018 AMIS_13300 ba7e49f35037ab87fb788eb769b38038 425 ProSitePatterns PS01095 Chitinases family 18 active site. 178 186 - T 14-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AMIS_13300 ba7e49f35037ab87fb788eb769b38038 425 SUPERFAMILY SSF51445 26 415 7.77E-89 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_13300 ba7e49f35037ab87fb788eb769b38038 425 SUPERFAMILY SSF54556 316 383 2.29E-10 T 14-10-2018 IPR029070 Chitinase insertion domain superfamily AMIS_17640 a71ca62de60c5fccd0a13a0558508916 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 8.5E-8 T 14-10-2018 AMIS_17640 a71ca62de60c5fccd0a13a0558508916 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 166 184 8.5E-8 T 14-10-2018 AMIS_17640 a71ca62de60c5fccd0a13a0558508916 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 8.5E-8 T 14-10-2018 AMIS_17640 a71ca62de60c5fccd0a13a0558508916 451 SUPERFAMILY SSF51905 157 347 1.4E-21 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_17640 a71ca62de60c5fccd0a13a0558508916 451 Gene3D G3DSA:3.50.50.100 2 418 1.5E-110 T 14-10-2018 AMIS_17640 a71ca62de60c5fccd0a13a0558508916 451 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 333 5.2E-51 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMIS_17640 a71ca62de60c5fccd0a13a0558508916 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 9 31 1.6E-7 T 14-10-2018 AMIS_17640 a71ca62de60c5fccd0a13a0558508916 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 310 317 1.6E-7 T 14-10-2018 AMIS_17640 a71ca62de60c5fccd0a13a0558508916 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 166 191 1.6E-7 T 14-10-2018 AMIS_17640 a71ca62de60c5fccd0a13a0558508916 451 SUPERFAMILY SSF51905 8 218 2.59E-29 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_68480 306077d5279326120dbace0cc00b113b 258 Pfam PF11361 Protein of unknown function (DUF3159) 53 249 4.3E-53 T 14-10-2018 IPR016566 Uncharacterised conserved protein UCP010219 AMIS_29720 8402e6ef5fde1d7d30e3629cde9c4b74 779 Pfam PF16499 Alpha galactosidase A 147 339 1.6E-17 T 14-10-2018 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AMIS_29720 8402e6ef5fde1d7d30e3629cde9c4b74 779 Pfam PF16499 Alpha galactosidase A 41 113 5.9E-7 T 14-10-2018 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AMIS_29720 8402e6ef5fde1d7d30e3629cde9c4b74 779 SUPERFAMILY SSF51011 341 427 1.42E-14 T 14-10-2018 AMIS_29720 8402e6ef5fde1d7d30e3629cde9c4b74 779 Gene3D G3DSA:2.60.120.260 483 610 7.9E-17 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_29720 8402e6ef5fde1d7d30e3629cde9c4b74 779 SUPERFAMILY SSF81296 608 691 6.16E-15 T 14-10-2018 IPR014756 Immunoglobulin E-set AMIS_29720 8402e6ef5fde1d7d30e3629cde9c4b74 779 SUPERFAMILY SSF51445 17 339 2.07E-52 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_29720 8402e6ef5fde1d7d30e3629cde9c4b74 779 Gene3D G3DSA:2.60.40.1180 343 433 3.9E-26 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta AMIS_29720 8402e6ef5fde1d7d30e3629cde9c4b74 779 Gene3D G3DSA:2.60.40.10 611 694 1.2E-14 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_29720 8402e6ef5fde1d7d30e3629cde9c4b74 779 Gene3D G3DSA:2.60.120.260 695 775 6.9E-6 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_29720 8402e6ef5fde1d7d30e3629cde9c4b74 779 PRINTS PR00740 Glycosyl hydrolase family 27 signature 57 72 1.4E-10 T 14-10-2018 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AMIS_29720 8402e6ef5fde1d7d30e3629cde9c4b74 779 PRINTS PR00740 Glycosyl hydrolase family 27 signature 272 291 1.4E-10 T 14-10-2018 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AMIS_29720 8402e6ef5fde1d7d30e3629cde9c4b74 779 PRINTS PR00740 Glycosyl hydrolase family 27 signature 97 118 1.4E-10 T 14-10-2018 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AMIS_29720 8402e6ef5fde1d7d30e3629cde9c4b74 779 Pfam PF03442 Carbohydrate binding domain X2 613 682 2.7E-18 T 14-10-2018 IPR005102 Carbohydrate binding X2 domain AMIS_29720 8402e6ef5fde1d7d30e3629cde9c4b74 779 Gene3D G3DSA:3.20.20.70 5 342 6.4E-94 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_7260 fa30a908a7983533f6a784510172972b 363 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 43 361 5.9E-43 T 14-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 AMIS_7260 fa30a908a7983533f6a784510172972b 363 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 43 200 9.1E-36 T 14-10-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 AMIS_7260 fa30a908a7983533f6a784510172972b 363 Gene3D G3DSA:3.30.428.10 73 199 1.7E-89 T 14-10-2018 IPR036265 HIT-like superfamily AMIS_7260 fa30a908a7983533f6a784510172972b 363 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 213 361 4.6E-14 T 14-10-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 AMIS_7260 fa30a908a7983533f6a784510172972b 363 SUPERFAMILY SSF54197 42 201 2.84E-49 T 14-10-2018 IPR036265 HIT-like superfamily AMIS_7260 fa30a908a7983533f6a784510172972b 363 Gene3D G3DSA:3.30.428.10 44 360 1.7E-89 T 14-10-2018 IPR036265 HIT-like superfamily AMIS_7260 fa30a908a7983533f6a784510172972b 363 PIRSF PIRSF000808 37 363 3.9E-105 T 14-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 AMIS_7260 fa30a908a7983533f6a784510172972b 363 SUPERFAMILY SSF54197 207 361 1.47E-30 T 14-10-2018 IPR036265 HIT-like superfamily AMIS_7260 fa30a908a7983533f6a784510172972b 363 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 175 192 - T 14-10-2018 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 AMIS_56670 cd16d7e907448dc1d2063867336bac35 1607 Gene3D G3DSA:3.40.50.300 1041 1241 3.0E-12 T 14-10-2018 AMIS_56670 cd16d7e907448dc1d2063867336bac35 1607 Gene3D G3DSA:3.40.50.300 252 410 5.1E-15 T 14-10-2018 AMIS_56670 cd16d7e907448dc1d2063867336bac35 1607 Pfam PF13087 AAA domain 1241 1435 5.4E-13 T 14-10-2018 AMIS_56670 cd16d7e907448dc1d2063867336bac35 1607 Pfam PF13086 AAA domain 283 346 1.5E-7 T 14-10-2018 AMIS_56670 cd16d7e907448dc1d2063867336bac35 1607 SUPERFAMILY SSF52540 280 348 2.02E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_56670 cd16d7e907448dc1d2063867336bac35 1607 SUPERFAMILY SSF52980 1484 1582 2.95E-10 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AMIS_56670 cd16d7e907448dc1d2063867336bac35 1607 Gene3D G3DSA:3.40.50.300 1263 1467 1.9E-26 T 14-10-2018 AMIS_56670 cd16d7e907448dc1d2063867336bac35 1607 Pfam PF13195 Protein of unknown function (DUF4011) 26 171 1.0E-22 T 14-10-2018 IPR025103 Protein of unknown function DUF4011 AMIS_56670 cd16d7e907448dc1d2063867336bac35 1607 SUPERFAMILY SSF52540 1169 1434 1.04E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_38420 b22f3ea2a89942464c72a93e7294153b 484 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.0E-5 T 14-10-2018 AMIS_38420 b22f3ea2a89942464c72a93e7294153b 484 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 174 199 1.0E-5 T 14-10-2018 AMIS_38420 b22f3ea2a89942464c72a93e7294153b 484 Pfam PF00743 Flavin-binding monooxygenase-like 77 208 1.6E-9 T 14-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 AMIS_38420 b22f3ea2a89942464c72a93e7294153b 484 Pfam PF13450 NAD(P)-binding Rossmann-like domain 9 61 6.8E-7 T 14-10-2018 AMIS_38420 b22f3ea2a89942464c72a93e7294153b 484 SUPERFAMILY SSF51905 1 384 2.59E-52 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_38420 b22f3ea2a89942464c72a93e7294153b 484 Gene3D G3DSA:3.50.50.60 1 264 1.9E-56 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_38420 b22f3ea2a89942464c72a93e7294153b 484 Gene3D G3DSA:3.50.50.60 318 422 1.7E-7 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_29480 d9096007d5b4d90a102d227012a4f522 315 Gene3D G3DSA:3.40.50.720 1 311 8.8E-41 T 14-10-2018 AMIS_29480 d9096007d5b4d90a102d227012a4f522 315 Pfam PF13460 NAD(P)H-binding 8 216 2.6E-15 T 14-10-2018 IPR016040 NAD(P)-binding domain AMIS_29480 d9096007d5b4d90a102d227012a4f522 315 SUPERFAMILY SSF51735 1 304 1.33E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_38570 be1e4d260ac1023fd4856e5dec0e4cf8 402 SUPERFAMILY SSF103473 4 386 4.97E-39 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_38570 be1e4d260ac1023fd4856e5dec0e4cf8 402 Gene3D G3DSA:1.20.1250.20 202 389 6.4E-21 T 14-10-2018 AMIS_38570 be1e4d260ac1023fd4856e5dec0e4cf8 402 Gene3D G3DSA:1.20.1250.20 1 184 2.7E-14 T 14-10-2018 AMIS_38570 be1e4d260ac1023fd4856e5dec0e4cf8 402 Pfam PF07690 Major Facilitator Superfamily 235 397 1.6E-10 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_38570 be1e4d260ac1023fd4856e5dec0e4cf8 402 Pfam PF07690 Major Facilitator Superfamily 7 222 1.2E-9 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_63820 90f1ddaa09a4c847097fecf0e149fcf3 875 Gene3D G3DSA:3.40.50.300 189 374 5.0E-40 T 14-10-2018 AMIS_63820 90f1ddaa09a4c847097fecf0e149fcf3 875 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 11 873 7.1E-225 T 14-10-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 AMIS_63820 90f1ddaa09a4c847097fecf0e149fcf3 875 Pfam PF00271 Helicase conserved C-terminal domain 227 355 1.2E-8 T 14-10-2018 IPR001650 Helicase, C-terminal AMIS_63820 90f1ddaa09a4c847097fecf0e149fcf3 875 Gene3D G3DSA:1.20.120.1080 404 479 2.8E-8 T 14-10-2018 AMIS_63820 90f1ddaa09a4c847097fecf0e149fcf3 875 PIRSF PIRSF005496 6 875 1.0E-253 T 14-10-2018 AMIS_63820 90f1ddaa09a4c847097fecf0e149fcf3 875 Pfam PF08482 ATP-dependent helicase C-terminal 735 861 3.6E-50 T 14-10-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal AMIS_63820 90f1ddaa09a4c847097fecf0e149fcf3 875 SMART SM00847 417 551 4.8E-4 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 AMIS_63820 90f1ddaa09a4c847097fecf0e149fcf3 875 SUPERFAMILY SSF52540 26 366 1.67E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_63820 90f1ddaa09a4c847097fecf0e149fcf3 875 Gene3D G3DSA:3.40.50.300 5 188 1.1E-48 T 14-10-2018 AMIS_63820 90f1ddaa09a4c847097fecf0e149fcf3 875 Pfam PF04408 Helicase associated domain (HA2) 418 479 1.1E-9 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 AMIS_63820 90f1ddaa09a4c847097fecf0e149fcf3 875 SMART SM00490 245 357 1.1E-11 T 14-10-2018 IPR001650 Helicase, C-terminal AMIS_63820 90f1ddaa09a4c847097fecf0e149fcf3 875 SMART SM00487 9 195 1.1E-15 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMIS_49250 b26f29a7ecce0eeb7aa16e109610d826 999 Gene3D G3DSA:2.115.10.20 32 344 7.9E-70 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMIS_49250 b26f29a7ecce0eeb7aa16e109610d826 999 Gene3D G3DSA:2.60.120.260 763 914 2.7E-34 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_49250 b26f29a7ecce0eeb7aa16e109610d826 999 Gene3D G3DSA:2.60.120.260 345 506 7.5E-32 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_49250 b26f29a7ecce0eeb7aa16e109610d826 999 Pfam PF04616 Glycosyl hydrolases family 43 47 330 1.6E-28 T 14-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 AMIS_49250 b26f29a7ecce0eeb7aa16e109610d826 999 Pfam PF07532 Bacterial Ig-like domain (group 4) 512 567 2.2E-6 T 14-10-2018 IPR011081 Bacterial Ig-related AMIS_49250 b26f29a7ecce0eeb7aa16e109610d826 999 SUPERFAMILY SSF75005 37 336 1.3E-53 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMIS_49250 b26f29a7ecce0eeb7aa16e109610d826 999 Gene3D G3DSA:2.60.40.10 679 756 7.6E-5 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_49250 b26f29a7ecce0eeb7aa16e109610d826 999 Gene3D G3DSA:2.60.40.10 589 678 7.3E-5 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_68620 ec96479cd49f94618cd210333c4679da 315 SUPERFAMILY SSF110581 6 302 2.35E-100 T 14-10-2018 IPR022830 Indigoidine synthase A-like GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 AMIS_68620 ec96479cd49f94618cd210333c4679da 315 Gene3D G3DSA:3.40.1790.10 2 304 6.1E-112 T 14-10-2018 IPR022830 Indigoidine synthase A-like GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 AMIS_68620 ec96479cd49f94618cd210333c4679da 315 Hamap MF_01876 Pseudouridine-5'-phosphate glycosidase [psuG]. 10 304 39.58 T 14-10-2018 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 AMIS_68620 ec96479cd49f94618cd210333c4679da 315 Pfam PF04227 Indigoidine synthase A like protein 12 301 6.5E-114 T 14-10-2018 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 AMIS_51830 5aa637b95f667e0893c30ae64cd0882a 222 SMART SM00422 1 75 3.1E-18 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_51830 5aa637b95f667e0893c30ae64cd0882a 222 Pfam PF00376 MerR family regulatory protein 2 43 5.6E-12 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_51830 5aa637b95f667e0893c30ae64cd0882a 222 Gene3D G3DSA:1.10.1660.10 16 220 1.9E-16 T 14-10-2018 AMIS_51830 5aa637b95f667e0893c30ae64cd0882a 222 SUPERFAMILY SSF46955 14 77 1.33E-12 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily AMIS_15240 09cb3d2fea258410417ecb7d7dd5eed5 478 Gene3D G3DSA:3.90.190.20 320 473 9.3E-36 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AMIS_15240 09cb3d2fea258410417ecb7d7dd5eed5 478 SUPERFAMILY SSF53623 103 319 5.5E-57 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AMIS_15240 09cb3d2fea258410417ecb7d7dd5eed5 478 Pfam PF01225 Mur ligase family, catalytic domain 20 116 5.1E-17 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AMIS_15240 09cb3d2fea258410417ecb7d7dd5eed5 478 Gene3D G3DSA:3.40.1190.10 106 319 6.1E-64 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AMIS_15240 09cb3d2fea258410417ecb7d7dd5eed5 478 Pfam PF08245 Mur ligase middle domain 122 301 3.9E-20 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AMIS_15240 09cb3d2fea258410417ecb7d7dd5eed5 478 SUPERFAMILY SSF53244 321 466 2.49E-35 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AMIS_15240 09cb3d2fea258410417ecb7d7dd5eed5 478 Pfam PF02875 Mur ligase family, glutamate ligase domain 322 398 5.3E-14 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 AMIS_15240 09cb3d2fea258410417ecb7d7dd5eed5 478 Gene3D G3DSA:3.40.50.720 19 105 7.7E-25 T 14-10-2018 AMIS_15240 09cb3d2fea258410417ecb7d7dd5eed5 478 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 17 469 33.66 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMIS_15240 09cb3d2fea258410417ecb7d7dd5eed5 478 SUPERFAMILY SSF51984 19 104 1.18E-22 T 14-10-2018 AMIS_15240 09cb3d2fea258410417ecb7d7dd5eed5 478 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 20 463 3.4E-121 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMIS_74150 37242037f90ba4d12408e8a3b0207a56 361 Gene3D G3DSA:3.40.50.300 3 276 3.8E-138 T 14-10-2018 AMIS_74150 37242037f90ba4d12408e8a3b0207a56 361 Pfam PF06071 Protein of unknown function (DUF933) 277 360 9.4E-38 T 14-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 AMIS_74150 37242037f90ba4d12408e8a3b0207a56 361 SUPERFAMILY SSF81271 277 361 2.62E-34 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AMIS_74150 37242037f90ba4d12408e8a3b0207a56 361 SUPERFAMILY SSF52540 3 299 1.15E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_74150 37242037f90ba4d12408e8a3b0207a56 361 PIRSF PIRSF006641 1 361 4.7E-138 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 AMIS_74150 37242037f90ba4d12408e8a3b0207a56 361 Gene3D G3DSA:3.10.20.30 48 359 3.8E-138 T 14-10-2018 IPR012675 Beta-grasp domain superfamily AMIS_74150 37242037f90ba4d12408e8a3b0207a56 361 Gene3D G3DSA:1.10.150.300 113 200 3.8E-138 T 14-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 AMIS_74150 37242037f90ba4d12408e8a3b0207a56 361 Pfam PF01926 50S ribosome-binding GTPase 5 122 1.7E-21 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 AMIS_74150 37242037f90ba4d12408e8a3b0207a56 361 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 3 361 3.5E-131 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 AMIS_74150 37242037f90ba4d12408e8a3b0207a56 361 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 8.0E-33 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 AMIS_74150 37242037f90ba4d12408e8a3b0207a56 361 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 8.0E-33 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 AMIS_74150 37242037f90ba4d12408e8a3b0207a56 361 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 8.0E-33 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 AMIS_74150 37242037f90ba4d12408e8a3b0207a56 361 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 8.0E-33 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 AMIS_74150 37242037f90ba4d12408e8a3b0207a56 361 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 361 42.35 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 AMIS_60220 302b5f4ca27392e7d4202df67a17ddb8 731 Gene3D G3DSA:3.40.50.300 402 503 6.4E-11 T 14-10-2018 AMIS_60220 302b5f4ca27392e7d4202df67a17ddb8 731 Gene3D G3DSA:3.40.50.300 521 719 4.2E-25 T 14-10-2018 AMIS_60220 302b5f4ca27392e7d4202df67a17ddb8 731 Pfam PF13245 AAA domain 241 498 5.0E-19 T 14-10-2018 AMIS_60220 302b5f4ca27392e7d4202df67a17ddb8 731 Pfam PF13361 UvrD-like helicase C-terminal domain 631 700 1.0E-9 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AMIS_60220 302b5f4ca27392e7d4202df67a17ddb8 731 SUPERFAMILY SSF52540 230 707 1.86E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_60220 302b5f4ca27392e7d4202df67a17ddb8 731 Gene3D G3DSA:3.40.50.300 230 373 8.3E-17 T 14-10-2018 AMIS_49960 fdc36ee3c424a35d26fc88da9a517efb 394 Pfam PF09865 Predicted periplasmic protein (DUF2092) 101 274 4.7E-5 T 14-10-2018 IPR019207 Protein of unknown function DUF2092, periplasmic AMIS_49960 fdc36ee3c424a35d26fc88da9a517efb 394 Gene3D G3DSA:2.50.20.10 70 276 8.4E-21 T 14-10-2018 AMIS_49960 fdc36ee3c424a35d26fc88da9a517efb 394 SUPERFAMILY SSF89392 108 277 1.26E-11 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX AMIS_77780 823c06ab611fd84e04d780fb3813043c 295 SUPERFAMILY SSF51735 6 160 6.09E-23 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_77780 823c06ab611fd84e04d780fb3813043c 295 Gene3D G3DSA:1.10.1040.20 163 257 1.9E-15 T 14-10-2018 IPR037108 TM1727-like, C-terminal domain superfamily AMIS_77780 823c06ab611fd84e04d780fb3813043c 295 Pfam PF10727 Rossmann-like domain 3 109 9.7E-34 T 14-10-2018 IPR019665 Putative oxidoreductase/dehydrogenase, Rossmann-like domain AMIS_77780 823c06ab611fd84e04d780fb3813043c 295 Gene3D G3DSA:3.40.50.720 2 160 5.5E-32 T 14-10-2018 AMIS_77780 823c06ab611fd84e04d780fb3813043c 295 Pfam PF10728 Domain of unknown function (DUF2520) 140 254 1.1E-35 T 14-10-2018 IPR018931 Domain of unknown function DUF2520 AMIS_77780 823c06ab611fd84e04d780fb3813043c 295 SUPERFAMILY SSF48179 164 261 4.08E-23 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMIS_56960 1d960cbdf90dfd8c7d9d8fee59fe17ff 202 Pfam PF00265 Thymidine kinase 8 192 2.8E-21 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 AMIS_56960 1d960cbdf90dfd8c7d9d8fee59fe17ff 202 Gene3D G3DSA:3.40.50.300 5 140 8.2E-16 T 14-10-2018 AMIS_56960 1d960cbdf90dfd8c7d9d8fee59fe17ff 202 SUPERFAMILY SSF52540 6 141 2.5E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_56960 1d960cbdf90dfd8c7d9d8fee59fe17ff 202 SUPERFAMILY SSF57716 147 197 1.85E-6 T 14-10-2018 AMIS_56960 1d960cbdf90dfd8c7d9d8fee59fe17ff 202 PIRSF PIRSF035805 5 200 1.4E-34 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 AMIS_56960 1d960cbdf90dfd8c7d9d8fee59fe17ff 202 SMART SM00382 5 144 0.002 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_70190 798a8653f95812bfd248af948611e75d 281 Hamap MF_00052_B Ribonuclease HII [rnhB]. 29 210 33.281 T 14-10-2018 IPR022898 Ribonuclease HII GO:0004523 AMIS_70190 798a8653f95812bfd248af948611e75d 281 SUPERFAMILY SSF53098 19 213 4.25E-58 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily AMIS_70190 798a8653f95812bfd248af948611e75d 281 Gene3D G3DSA:3.30.420.10 9 221 8.9E-64 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMIS_70190 798a8653f95812bfd248af948611e75d 281 Pfam PF01351 Ribonuclease HII 31 209 1.0E-32 T 14-10-2018 IPR024567 Ribonuclease HII/HIII domain AMIS_5160 d8e838e8fe51fac3e5eb3dd5a1492e20 785 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 4.3E-5 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMIS_5160 d8e838e8fe51fac3e5eb3dd5a1492e20 785 PRINTS PR00702 Acriflavin resistance protein family signature 375 396 4.3E-5 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMIS_5160 d8e838e8fe51fac3e5eb3dd5a1492e20 785 Pfam PF04389 Peptidase family M28 118 306 3.2E-37 T 14-10-2018 IPR007484 Peptidase M28 AMIS_5160 d8e838e8fe51fac3e5eb3dd5a1492e20 785 Gene3D G3DSA:3.40.630.10 44 315 1.8E-57 T 14-10-2018 AMIS_5160 d8e838e8fe51fac3e5eb3dd5a1492e20 785 SUPERFAMILY SSF53187 37 312 4.57E-49 T 14-10-2018 AMIS_67710 f289ee3cf7256d7177a651d0a02edca0 129 SUPERFAMILY SSF49482 4 108 3.79E-16 T 14-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AMIS_67710 f289ee3cf7256d7177a651d0a02edca0 129 Gene3D G3DSA:2.60.130.10 1 103 7.7E-15 T 14-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AMIS_22630 8e6bf98bf5fd7930b770e26d4c185cea 121 Pfam PF05331 Protein of unknown function (DUF742) 14 121 6.0E-22 T 14-10-2018 IPR007995 Protein of unknown function DUF742 AMIS_69940 8247950668d3e10ce6a17822264cf464 279 PIRSF PIRSF021603 2 279 3.8E-102 T 14-10-2018 IPR016794 Uncharacterised conserved protein UCP21603, acetyltransferase-like AMIS_69940 8247950668d3e10ce6a17822264cf464 279 Gene3D G3DSA:3.40.630.30 100 277 2.4E-21 T 14-10-2018 AMIS_69940 8247950668d3e10ce6a17822264cf464 279 SUPERFAMILY SSF55729 37 273 2.48E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_69940 8247950668d3e10ce6a17822264cf464 279 Pfam PF00583 Acetyltransferase (GNAT) family 202 268 1.1E-11 T 14-10-2018 IPR000182 GNAT domain AMIS_69940 8247950668d3e10ce6a17822264cf464 279 Pfam PF13312 Domain of unknown function (DUF4081) 47 151 1.3E-38 T 14-10-2018 IPR025289 Domain of unknown function DUF4081 AMIS_32710 6e83e4f56ab83194f77823cef6875ffd 800 Pfam PF08376 Nitrate and nitrite sensing 64 293 1.2E-32 T 14-10-2018 IPR013587 Nitrate/nitrite sensing protein AMIS_32710 6e83e4f56ab83194f77823cef6875ffd 800 SUPERFAMILY SSF55874 504 620 3.01E-13 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_32710 6e83e4f56ab83194f77823cef6875ffd 800 Gene3D G3DSA:3.30.565.10 475 621 5.0E-12 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_32710 6e83e4f56ab83194f77823cef6875ffd 800 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 516 621 2.2E-6 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_32710 6e83e4f56ab83194f77823cef6875ffd 800 SMART SM00387 513 623 0.0061 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_52270 39d896ea34b0f93468d6bbbdccb1f899 345 Gene3D G3DSA:3.40.390.10 34 238 1.9E-19 T 14-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 AMIS_52270 39d896ea34b0f93468d6bbbdccb1f899 345 SMART SM00235 36 182 2.0E-6 T 14-10-2018 IPR006026 Peptidase, metallopeptidase GO:0006508|GO:0008237|GO:0008270 AMIS_52270 39d896ea34b0f93468d6bbbdccb1f899 345 Pfam PF01400 Astacin (Peptidase family M12A) 39 150 6.3E-5 T 14-10-2018 IPR001506 Peptidase M12A GO:0004222|GO:0006508 AMIS_52270 39d896ea34b0f93468d6bbbdccb1f899 345 SUPERFAMILY SSF55486 33 238 7.84E-25 T 14-10-2018 AMIS_27230 22a18bd74e2a69b92a12b6e1944b9435 98 TIGRFAM TIGR03967 mycofact_MftB: putative mycofactocin binding protein MftB 12 91 5.5E-30 T 14-10-2018 IPR023850 Putative mycofactocin binding protein MftB AMIS_34120 8bf93db5c6e264b8f095501a912e60f4 355 Pfam PF07687 Peptidase dimerisation domain 160 263 1.8E-14 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain AMIS_34120 8bf93db5c6e264b8f095501a912e60f4 355 Pfam PF01546 Peptidase family M20/M25/M40 64 350 4.2E-29 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 AMIS_34120 8bf93db5c6e264b8f095501a912e60f4 355 Gene3D G3DSA:3.40.630.10 9 341 5.1E-80 T 14-10-2018 AMIS_34120 8bf93db5c6e264b8f095501a912e60f4 355 Gene3D G3DSA:3.30.70.360 162 275 5.1E-80 T 14-10-2018 AMIS_34120 8bf93db5c6e264b8f095501a912e60f4 355 SUPERFAMILY SSF55031 162 270 3.89E-16 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AMIS_34120 8bf93db5c6e264b8f095501a912e60f4 355 SUPERFAMILY SSF53187 3 353 2.31E-43 T 14-10-2018 AMIS_50070 3f61964fc841f3a7df4afbcff3588d79 401 Pfam PF02803 Thiolase, C-terminal domain 279 399 5.9E-40 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 AMIS_50070 3f61964fc841f3a7df4afbcff3588d79 401 Pfam PF00108 Thiolase, N-terminal domain 5 269 2.2E-55 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 AMIS_50070 3f61964fc841f3a7df4afbcff3588d79 401 SUPERFAMILY SSF53901 279 399 1.27E-38 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_50070 3f61964fc841f3a7df4afbcff3588d79 401 ProSitePatterns PS00737 Thiolases signature 2. 346 362 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 AMIS_50070 3f61964fc841f3a7df4afbcff3588d79 401 PIRSF PIRSF000429 1 401 5.5E-109 T 14-10-2018 IPR002155 Thiolase GO:0016747 AMIS_50070 3f61964fc841f3a7df4afbcff3588d79 401 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 398 3.2E-126 T 14-10-2018 IPR002155 Thiolase GO:0016747 AMIS_50070 3f61964fc841f3a7df4afbcff3588d79 401 Gene3D G3DSA:3.40.47.10 6 297 9.6E-127 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_50070 3f61964fc841f3a7df4afbcff3588d79 401 SUPERFAMILY SSF53901 1 275 9.17E-63 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_50070 3f61964fc841f3a7df4afbcff3588d79 401 Gene3D G3DSA:3.40.47.10 129 394 9.6E-127 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_72650 038bfc274a954e21e268f5b2c121a1b8 349 Pfam PF01553 Acyltransferase 122 267 9.1E-9 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AMIS_72650 038bfc274a954e21e268f5b2c121a1b8 349 SMART SM00563 130 277 0.0034 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AMIS_72650 038bfc274a954e21e268f5b2c121a1b8 349 SUPERFAMILY SSF69593 68 279 9.29E-10 T 14-10-2018 AMIS_44930 08184c7e3e7846e969ba432938671b01 245 SUPERFAMILY SSF54593 133 242 3.1E-10 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_44930 08184c7e3e7846e969ba432938671b01 245 Gene3D G3DSA:3.10.180.10 131 245 3.3E-24 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_44930 08184c7e3e7846e969ba432938671b01 245 Gene3D G3DSA:3.10.180.10 1 130 3.1E-25 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_44930 08184c7e3e7846e969ba432938671b01 245 SUPERFAMILY SSF54593 4 126 2.11E-14 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_65780 b9b6cae309c98a6707483bc3726a8804 408 SUPERFAMILY SSF53756 9 374 2.0E-41 T 14-10-2018 AMIS_65780 b9b6cae309c98a6707483bc3726a8804 408 Pfam PF00534 Glycosyl transferases group 1 192 351 2.1E-17 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 AMIS_65780 b9b6cae309c98a6707483bc3726a8804 408 Gene3D G3DSA:3.40.50.2000 188 357 8.3E-28 T 14-10-2018 AMIS_65780 b9b6cae309c98a6707483bc3726a8804 408 Gene3D G3DSA:3.40.50.2000 18 187 4.5E-10 T 14-10-2018 AMIS_65780 b9b6cae309c98a6707483bc3726a8804 408 Pfam PF13439 Glycosyltransferase Family 4 83 177 4.5E-9 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AMIS_65360 e51dee82dcf91387c19584b08fa66770 522 SUPERFAMILY SSF48452 38 209 7.01E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_65360 e51dee82dcf91387c19584b08fa66770 522 Pfam PF00990 Diguanylate cyclase, GGDEF domain 358 515 2.2E-38 T 14-10-2018 IPR000160 GGDEF domain AMIS_65360 e51dee82dcf91387c19584b08fa66770 522 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 356 518 2.0E-42 T 14-10-2018 IPR000160 GGDEF domain AMIS_65360 e51dee82dcf91387c19584b08fa66770 522 Gene3D G3DSA:1.25.40.10 133 321 6.8E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_65360 e51dee82dcf91387c19584b08fa66770 522 SMART SM00267 347 519 5.2E-53 T 14-10-2018 IPR000160 GGDEF domain AMIS_65360 e51dee82dcf91387c19584b08fa66770 522 Gene3D G3DSA:3.30.70.270 351 520 3.6E-52 T 14-10-2018 AMIS_65360 e51dee82dcf91387c19584b08fa66770 522 SUPERFAMILY SSF55073 363 517 2.35E-42 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_54980 bbe7abb7b95272b478f1ca623859ddfc 471 SUPERFAMILY SSF56112 18 285 1.89E-62 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMIS_54980 bbe7abb7b95272b478f1ca623859ddfc 471 Gene3D G3DSA:3.30.200.20 5 109 1.7E-22 T 14-10-2018 AMIS_54980 bbe7abb7b95272b478f1ca623859ddfc 471 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 145 157 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 AMIS_54980 bbe7abb7b95272b478f1ca623859ddfc 471 Gene3D G3DSA:1.10.510.10 110 288 7.5E-44 T 14-10-2018 AMIS_54980 bbe7abb7b95272b478f1ca623859ddfc 471 Pfam PF00069 Protein kinase domain 30 272 2.6E-37 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMIS_54980 bbe7abb7b95272b478f1ca623859ddfc 471 SMART SM00220 26 280 9.4E-47 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMIS_79930 104cb84d209ac8e984332c734b01e11d 409 Gene3D G3DSA:3.40.710.10 43 390 1.4E-100 T 14-10-2018 AMIS_79930 104cb84d209ac8e984332c734b01e11d 409 SUPERFAMILY SSF56601 44 391 1.98E-72 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMIS_79930 104cb84d209ac8e984332c734b01e11d 409 Pfam PF00144 Beta-lactamase 55 386 1.7E-60 T 14-10-2018 IPR001466 Beta-lactamase-related AMIS_55000 7637fa070f8a15b808ae67ebd899f44f 322 SUPERFAMILY SSF52317 7 194 1.41E-48 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_55000 7637fa070f8a15b808ae67ebd899f44f 322 Pfam PF01965 DJ-1/PfpI family 7 173 1.2E-21 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 AMIS_55000 7637fa070f8a15b808ae67ebd899f44f 322 Pfam PF12833 Helix-turn-helix domain 234 312 2.5E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMIS_55000 7637fa070f8a15b808ae67ebd899f44f 322 Gene3D G3DSA:1.10.10.60 212 320 5.1E-25 T 14-10-2018 AMIS_55000 7637fa070f8a15b808ae67ebd899f44f 322 SUPERFAMILY SSF46689 214 262 1.34E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_55000 7637fa070f8a15b808ae67ebd899f44f 322 Gene3D G3DSA:3.40.50.880 5 206 1.2E-54 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_55000 7637fa070f8a15b808ae67ebd899f44f 322 SUPERFAMILY SSF46689 265 316 8.51E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_55000 7637fa070f8a15b808ae67ebd899f44f 322 SMART SM00342 228 311 1.4E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMIS_18430 84b8be118a854aae93184f919c167531 486 Gene3D G3DSA:2.40.37.10 318 473 3.2E-16 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AMIS_18430 84b8be118a854aae93184f919c167531 486 SUPERFAMILY SSF50621 327 454 8.58E-16 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AMIS_18430 84b8be118a854aae93184f919c167531 486 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 48 262 3.4E-28 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 AMIS_18430 84b8be118a854aae93184f919c167531 486 Gene3D G3DSA:3.20.20.10 39 283 6.1E-47 T 14-10-2018 IPR029066 PLP-binding barrel AMIS_18430 84b8be118a854aae93184f919c167531 486 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 63 81 - T 14-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site AMIS_18430 84b8be118a854aae93184f919c167531 486 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 63 81 3.3E-6 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AMIS_18430 84b8be118a854aae93184f919c167531 486 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 330 349 3.3E-6 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AMIS_18430 84b8be118a854aae93184f919c167531 486 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 83 95 3.3E-6 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AMIS_18430 84b8be118a854aae93184f919c167531 486 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 340 432 2.3E-5 T 14-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 AMIS_18430 84b8be118a854aae93184f919c167531 486 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 228 241 - T 14-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site AMIS_18430 84b8be118a854aae93184f919c167531 486 SUPERFAMILY SSF51419 30 261 1.74E-35 T 14-10-2018 IPR029066 PLP-binding barrel AMIS_66390 e254f3c1f341d3e843359604d80a7a11 521 Gene3D G3DSA:2.60.120.260 370 521 4.9E-21 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_66390 e254f3c1f341d3e843359604d80a7a11 521 Gene3D G3DSA:3.20.20.80 46 343 2.3E-28 T 14-10-2018 AMIS_66390 e254f3c1f341d3e843359604d80a7a11 521 SUPERFAMILY SSF49785 371 519 2.27E-6 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_66390 e254f3c1f341d3e843359604d80a7a11 521 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 91 298 5.6E-11 T 14-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 AMIS_66390 e254f3c1f341d3e843359604d80a7a11 521 SUPERFAMILY SSF51445 91 363 3.47E-30 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_79620 d2a99c24d5f3afb8d729d30538feb349 220 SMART SM00421 156 213 1.9E-23 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_79620 d2a99c24d5f3afb8d729d30538feb349 220 ProSitePatterns PS00622 LuxR-type HTH domain signature. 173 200 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_79620 d2a99c24d5f3afb8d729d30538feb349 220 SUPERFAMILY SSF46894 149 218 1.05E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_79620 d2a99c24d5f3afb8d729d30538feb349 220 Gene3D G3DSA:3.40.50.12740 3 218 2.1E-64 T 14-10-2018 AMIS_79620 d2a99c24d5f3afb8d729d30538feb349 220 SMART SM00448 3 118 2.1E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_79620 d2a99c24d5f3afb8d729d30538feb349 220 SUPERFAMILY SSF52172 2 133 2.7E-31 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_79620 d2a99c24d5f3afb8d729d30538feb349 220 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 173 1.1E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_79620 d2a99c24d5f3afb8d729d30538feb349 220 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 189 1.1E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_79620 d2a99c24d5f3afb8d729d30538feb349 220 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 189 201 1.1E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_79620 d2a99c24d5f3afb8d729d30538feb349 220 Pfam PF00072 Response regulator receiver domain 6 119 5.8E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_79620 d2a99c24d5f3afb8d729d30538feb349 220 Pfam PF00196 Bacterial regulatory proteins, luxR family 158 213 1.0E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_11880 85755629d33e502970f406c0afbd0ed9 258 SUPERFAMILY SSF50249 8 88 2.74E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMIS_11880 85755629d33e502970f406c0afbd0ed9 258 TIGRFAM TIGR00613 reco: DNA repair protein RecO 11 212 1.6E-32 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 AMIS_11880 85755629d33e502970f406c0afbd0ed9 258 Pfam PF02565 Recombination protein O C terminal 97 249 2.1E-34 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 AMIS_11880 85755629d33e502970f406c0afbd0ed9 258 SUPERFAMILY SSF57863 94 243 1.54E-39 T 14-10-2018 IPR037278 ARFGAP/RecO-like zinc finger AMIS_11880 85755629d33e502970f406c0afbd0ed9 258 Pfam PF11967 Recombination protein O N terminal 9 88 2.5E-24 T 14-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal AMIS_11880 85755629d33e502970f406c0afbd0ed9 258 Gene3D G3DSA:2.40.50.140 5 92 1.4E-23 T 14-10-2018 AMIS_11880 85755629d33e502970f406c0afbd0ed9 258 Hamap MF_00201 DNA repair protein RecO [recO]. 8 254 26.272 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 AMIS_14550 ec91e92b8837a552390edd1ec620280b 427 Pfam PF07690 Major Facilitator Superfamily 61 289 6.2E-21 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_14550 ec91e92b8837a552390edd1ec620280b 427 Gene3D G3DSA:1.20.1250.20 234 425 1.4E-23 T 14-10-2018 AMIS_14550 ec91e92b8837a552390edd1ec620280b 427 ProSitePatterns PS00216 Sugar transport proteins signature 1. 297 314 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AMIS_14550 ec91e92b8837a552390edd1ec620280b 427 Gene3D G3DSA:1.20.1250.20 22 216 2.6E-22 T 14-10-2018 AMIS_14550 ec91e92b8837a552390edd1ec620280b 427 SUPERFAMILY SSF103473 26 423 1.96E-50 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_2160 3a6770e2145680bb9024189f4d630024 405 SUPERFAMILY SSF103473 7 385 6.15E-40 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_2160 3a6770e2145680bb9024189f4d630024 405 Pfam PF07690 Major Facilitator Superfamily 30 220 5.1E-18 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_2160 3a6770e2145680bb9024189f4d630024 405 Gene3D G3DSA:1.20.1250.20 9 189 3.2E-18 T 14-10-2018 AMIS_2160 3a6770e2145680bb9024189f4d630024 405 Gene3D G3DSA:1.20.1250.20 203 389 7.2E-15 T 14-10-2018 AMIS_24940 562d4531d861dc04d349a4a03c99532f 257 SUPERFAMILY SSF102198 15 255 4.32E-54 T 14-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 AMIS_24940 562d4531d861dc04d349a4a03c99532f 257 Pfam PF04199 Putative cyclase 19 194 3.9E-35 T 14-10-2018 IPR007325 Kynurenine formamidase/cyclase-like GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 AMIS_24940 562d4531d861dc04d349a4a03c99532f 257 Gene3D G3DSA:3.50.30.50 1 257 4.4E-92 T 14-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 AMIS_76690 bf57880a24cd98367e753ff22c455c57 131 SUPERFAMILY SSF47413 7 67 8.16E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_76690 bf57880a24cd98367e753ff22c455c57 131 Pfam PF01381 Helix-turn-helix 15 66 2.4E-16 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMIS_76690 bf57880a24cd98367e753ff22c455c57 131 Gene3D G3DSA:1.10.260.40 6 73 9.3E-19 T 14-10-2018 AMIS_76690 bf57880a24cd98367e753ff22c455c57 131 SMART SM00530 14 69 1.4E-15 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMIS_36080 0a67e928f239b3cc30a1a4661cc773b6 124 Pfam PF00072 Response regulator receiver domain 4 116 4.5E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_36080 0a67e928f239b3cc30a1a4661cc773b6 124 SUPERFAMILY SSF52172 2 119 1.85E-37 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_36080 0a67e928f239b3cc30a1a4661cc773b6 124 Gene3D G3DSA:3.40.50.12740 2 122 1.9E-40 T 14-10-2018 AMIS_36080 0a67e928f239b3cc30a1a4661cc773b6 124 SMART SM00448 2 115 3.0E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_45700 8a1cac3245c2b6cc8d55f79ce26b516f 404 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 130 351 4.8E-17 T 14-10-2018 IPR018713 Domain of unknown function DUF2236 AMIS_12850 6e3cc89c8f18b267c9938c9527dffa3c 326 SUPERFAMILY SSF52540 34 168 2.02E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_12850 6e3cc89c8f18b267c9938c9527dffa3c 326 Gene3D G3DSA:3.40.50.300 8 299 6.2E-74 T 14-10-2018 AMIS_12850 6e3cc89c8f18b267c9938c9527dffa3c 326 Pfam PF06414 Zeta toxin 32 220 1.2E-52 T 14-10-2018 IPR010488 Zeta toxin domain GO:0005524|GO:0016301 AMIS_22100 4d3f6e941aaea9834ff1e1a1f9f86231 170 SUPERFAMILY SSF55729 2 161 1.42E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_22100 4d3f6e941aaea9834ff1e1a1f9f86231 170 Gene3D G3DSA:3.40.630.30 1 163 9.4E-23 T 14-10-2018 AMIS_22100 4d3f6e941aaea9834ff1e1a1f9f86231 170 Pfam PF00583 Acetyltransferase (GNAT) family 43 139 6.5E-13 T 14-10-2018 IPR000182 GNAT domain AMIS_70200 5a0af713bbdc7289ef9278e0886803ac 170 SUPERFAMILY SSF55811 7 130 9.61E-21 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMIS_70200 5a0af713bbdc7289ef9278e0886803ac 170 PRINTS PR00502 NUDIX hydrolase family signature 36 50 7.8E-8 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AMIS_70200 5a0af713bbdc7289ef9278e0886803ac 170 PRINTS PR00502 NUDIX hydrolase family signature 50 65 7.8E-8 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AMIS_70200 5a0af713bbdc7289ef9278e0886803ac 170 Gene3D G3DSA:3.90.79.10 2 135 1.2E-24 T 14-10-2018 AMIS_70200 5a0af713bbdc7289ef9278e0886803ac 170 Pfam PF00293 NUDIX domain 6 128 1.9E-18 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMIS_70200 5a0af713bbdc7289ef9278e0886803ac 170 ProSitePatterns PS00893 Nudix box signature. 41 62 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMIS_11380 318241dbe664ef11fa62b8290a68742e 265 SUPERFAMILY SSF53474 8 265 1.32E-52 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_11380 318241dbe664ef11fa62b8290a68742e 265 Gene3D G3DSA:3.40.50.1820 1 265 4.8E-66 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_11380 318241dbe664ef11fa62b8290a68742e 265 Pfam PF12697 Alpha/beta hydrolase family 21 260 1.9E-17 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_11380 318241dbe664ef11fa62b8290a68742e 265 PRINTS PR00111 Alpha/beta hydrolase fold signature 105 118 2.1E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_11380 318241dbe664ef11fa62b8290a68742e 265 PRINTS PR00111 Alpha/beta hydrolase fold signature 43 58 2.1E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_11380 318241dbe664ef11fa62b8290a68742e 265 PRINTS PR00111 Alpha/beta hydrolase fold signature 91 104 2.1E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_11380 318241dbe664ef11fa62b8290a68742e 265 PRINTS PR00111 Alpha/beta hydrolase fold signature 211 225 2.1E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_48070 6b1c39a7958b175cd31319e7cbcc00ac 702 Gene3D G3DSA:3.20.20.80 138 582 2.5E-180 T 14-10-2018 AMIS_48070 6b1c39a7958b175cd31319e7cbcc00ac 702 SUPERFAMILY SSF51011 589 700 4.53E-21 T 14-10-2018 AMIS_48070 6b1c39a7958b175cd31319e7cbcc00ac 702 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 6 698 4.4E-304 T 14-10-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 AMIS_48070 6b1c39a7958b175cd31319e7cbcc00ac 702 Gene3D G3DSA:2.60.40.10 1 136 5.4E-50 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_48070 6b1c39a7958b175cd31319e7cbcc00ac 702 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 10 96 1.2E-20 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 AMIS_48070 6b1c39a7958b175cd31319e7cbcc00ac 702 SMART SM00642 158 561 2.2E-8 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMIS_48070 6b1c39a7958b175cd31319e7cbcc00ac 702 Gene3D G3DSA:2.60.40.1180 589 698 1.3E-13 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta AMIS_48070 6b1c39a7958b175cd31319e7cbcc00ac 702 Pfam PF00128 Alpha amylase, catalytic domain 188 277 8.5E-11 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMIS_48070 6b1c39a7958b175cd31319e7cbcc00ac 702 Pfam PF00128 Alpha amylase, catalytic domain 299 531 6.6E-6 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMIS_48070 6b1c39a7958b175cd31319e7cbcc00ac 702 SUPERFAMILY SSF51445 133 576 1.08E-130 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_48070 6b1c39a7958b175cd31319e7cbcc00ac 702 SUPERFAMILY SSF81296 5 146 8.12E-49 T 14-10-2018 IPR014756 Immunoglobulin E-set AMIS_38070 92a071159cb05cc1ca644ecc65cff261 123 Pfam PF01638 HxlR-like helix-turn-helix 28 116 2.7E-25 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type AMIS_38070 92a071159cb05cc1ca644ecc65cff261 123 SUPERFAMILY SSF46785 14 116 4.52E-32 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_38070 92a071159cb05cc1ca644ecc65cff261 123 Gene3D G3DSA:1.10.10.10 5 121 4.3E-41 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_4200 1d87ca2f3da393d31f9a05fa8e88718b 372 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 9 367 1.4E-102 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AMIS_4200 1d87ca2f3da393d31f9a05fa8e88718b 372 Gene3D G3DSA:3.90.1150.10 249 371 1.7E-34 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMIS_4200 1d87ca2f3da393d31f9a05fa8e88718b 372 SUPERFAMILY SSF53383 2 371 1.27E-96 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_4200 1d87ca2f3da393d31f9a05fa8e88718b 372 Gene3D G3DSA:3.40.640.10 1 248 2.7E-79 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_4200 1d87ca2f3da393d31f9a05fa8e88718b 372 PIRSF PIRSF000390 1 372 7.1E-98 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AMIS_59780 eb3a59a2a76b5afc06297e914d1c296e 201 Pfam PF08241 Methyltransferase domain 46 136 2.4E-26 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 AMIS_59780 eb3a59a2a76b5afc06297e914d1c296e 201 Gene3D G3DSA:3.40.50.150 3 200 9.4E-43 T 14-10-2018 AMIS_59780 eb3a59a2a76b5afc06297e914d1c296e 201 SUPERFAMILY SSF53335 8 191 5.42E-44 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_6300 11246854a883bfb0e87c97d9bf150bd2 135 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 4 135 33.671 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AMIS_6300 11246854a883bfb0e87c97d9bf150bd2 135 PIRSF PIRSF002131 5 135 1.1E-53 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AMIS_6300 11246854a883bfb0e87c97d9bf150bd2 135 SUPERFAMILY SSF53137 20 135 4.86E-49 T 14-10-2018 AMIS_6300 11246854a883bfb0e87c97d9bf150bd2 135 Pfam PF00411 Ribosomal protein S11 25 134 1.4E-48 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AMIS_6300 11246854a883bfb0e87c97d9bf150bd2 135 Gene3D G3DSA:3.30.420.80 8 135 5.3E-54 T 14-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 AMIS_6300 11246854a883bfb0e87c97d9bf150bd2 135 ProSitePatterns PS00054 Ribosomal protein S11 signature. 103 125 - T 14-10-2018 IPR018102 Ribosomal S11, conserved site AMIS_6300 11246854a883bfb0e87c97d9bf150bd2 135 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 16 132 4.1E-58 T 14-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_10980 2f88236f276dfeacddec59e544949107 341 Gene3D G3DSA:2.30.30.60 163 212 3.5E-17 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily AMIS_10980 2f88236f276dfeacddec59e544949107 341 Gene3D G3DSA:3.30.70.100 214 302 3.1E-12 T 14-10-2018 AMIS_10980 2f88236f276dfeacddec59e544949107 341 Pfam PF00924 Mechanosensitive ion channel 107 302 5.7E-34 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AMIS_10980 2f88236f276dfeacddec59e544949107 341 SUPERFAMILY SSF50182 148 205 2.58E-11 T 14-10-2018 IPR010920 LSM domain superfamily AMIS_10980 2f88236f276dfeacddec59e544949107 341 SUPERFAMILY SSF82861 92 146 1.16E-11 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AMIS_75860 946a1da3ede71d07b55f1f27eadfd262 503 Gene3D G3DSA:3.30.300.30 409 503 6.2E-27 T 14-10-2018 AMIS_75860 946a1da3ede71d07b55f1f27eadfd262 503 Pfam PF00501 AMP-binding enzyme 10 414 3.1E-81 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMIS_75860 946a1da3ede71d07b55f1f27eadfd262 503 Pfam PF13193 AMP-binding enzyme C-terminal domain 423 497 4.8E-14 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AMIS_75860 946a1da3ede71d07b55f1f27eadfd262 503 Gene3D G3DSA:3.40.50.12780 2 408 6.3E-92 T 14-10-2018 AMIS_75860 946a1da3ede71d07b55f1f27eadfd262 503 ProSitePatterns PS00455 Putative AMP-binding domain signature. 143 154 - T 14-10-2018 IPR020845 AMP-binding, conserved site AMIS_75860 946a1da3ede71d07b55f1f27eadfd262 503 SUPERFAMILY SSF56801 9 503 2.49E-120 T 14-10-2018 AMIS_47720 9ccbf3e21c7007787d82675fac197da8 296 SUPERFAMILY SSF55874 143 294 4.35E-13 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_47720 9ccbf3e21c7007787d82675fac197da8 296 Pfam PF07730 Histidine kinase 58 123 3.6E-18 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMIS_24800 eafcdff1ead2d7d3045f2bf3ce3e55dd 175 Gene3D G3DSA:2.60.120.10 4 175 1.7E-44 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMIS_24800 eafcdff1ead2d7d3045f2bf3ce3e55dd 175 Pfam PF07883 Cupin domain 58 118 3.1E-8 T 14-10-2018 IPR013096 Cupin 2, conserved barrel AMIS_24800 eafcdff1ead2d7d3045f2bf3ce3e55dd 175 SUPERFAMILY SSF51182 11 140 1.97E-19 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily AMIS_13540 c5e9fa0c8bed8cbc448cb1576742316f 317 Pfam PF00107 Zinc-binding dehydrogenase 142 256 1.5E-23 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMIS_13540 c5e9fa0c8bed8cbc448cb1576742316f 317 SMART SM00829 10 311 3.0E-11 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMIS_13540 c5e9fa0c8bed8cbc448cb1576742316f 317 Gene3D G3DSA:3.90.180.10 11 307 1.4E-73 T 14-10-2018 AMIS_13540 c5e9fa0c8bed8cbc448cb1576742316f 317 SUPERFAMILY SSF51735 104 262 3.25E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_13540 c5e9fa0c8bed8cbc448cb1576742316f 317 Gene3D G3DSA:3.40.50.720 114 257 1.4E-73 T 14-10-2018 AMIS_13540 c5e9fa0c8bed8cbc448cb1576742316f 317 SUPERFAMILY SSF50129 1 129 7.48E-23 T 14-10-2018 IPR011032 GroES-like superfamily AMIS_63360 e442c7a92387ca30a0657916e53422cd 384 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 8.0E-18 T 14-10-2018 AMIS_63360 e442c7a92387ca30a0657916e53422cd 384 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 143 158 8.0E-18 T 14-10-2018 AMIS_63360 e442c7a92387ca30a0657916e53422cd 384 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 3 25 8.0E-18 T 14-10-2018 AMIS_63360 e442c7a92387ca30a0657916e53422cd 384 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 8.0E-18 T 14-10-2018 AMIS_63360 e442c7a92387ca30a0657916e53422cd 384 Gene3D G3DSA:3.30.9.30 36 272 1.8E-81 T 14-10-2018 AMIS_63360 e442c7a92387ca30a0657916e53422cd 384 SUPERFAMILY SSF51905 3 367 2.12E-53 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_63360 e442c7a92387ca30a0657916e53422cd 384 Gene3D G3DSA:3.50.50.60 5 338 1.8E-81 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_63360 e442c7a92387ca30a0657916e53422cd 384 Pfam PF01494 FAD binding domain 278 313 9.6E-7 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 AMIS_63360 e442c7a92387ca30a0657916e53422cd 384 Pfam PF01494 FAD binding domain 4 78 7.1E-8 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 AMIS_6430 fb30cf88f880133a0b7e99b324da5138 256 SUPERFAMILY SSF53613 4 254 9.67E-68 T 14-10-2018 IPR029056 Ribokinase-like AMIS_6430 fb30cf88f880133a0b7e99b324da5138 256 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 7 252 2.8E-82 T 14-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AMIS_6430 fb30cf88f880133a0b7e99b324da5138 256 Gene3D G3DSA:3.40.1190.20 1 255 1.4E-89 T 14-10-2018 IPR029056 Ribokinase-like AMIS_6430 fb30cf88f880133a0b7e99b324da5138 256 Pfam PF08543 Phosphomethylpyrimidine kinase 14 249 2.6E-77 T 14-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 AMIS_46830 1e1f233786aae70f41538a254e4f07fd 248 Pfam PF00005 ABC transporter 21 167 9.3E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_46830 1e1f233786aae70f41538a254e4f07fd 248 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_46830 1e1f233786aae70f41538a254e4f07fd 248 SUPERFAMILY SSF52540 5 220 3.51E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_46830 1e1f233786aae70f41538a254e4f07fd 248 SMART SM00382 30 216 9.0E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_46830 1e1f233786aae70f41538a254e4f07fd 248 Gene3D G3DSA:3.40.50.300 2 244 1.4E-68 T 14-10-2018 AMIS_67410 2df5ee2166f0f2d714decaf206fa6ae3 247 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 6 20 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AMIS_67410 2df5ee2166f0f2d714decaf206fa6ae3 247 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 208 2.3E-42 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 AMIS_67410 2df5ee2166f0f2d714decaf206fa6ae3 247 Gene3D G3DSA:3.30.950.10 111 231 1.8E-41 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 AMIS_67410 2df5ee2166f0f2d714decaf206fa6ae3 247 TIGRFAM TIGR01465 cobM_cbiF: precorrin-4 C11-methyltransferase 3 242 1.3E-90 T 14-10-2018 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase GO:0009236|GO:0046026 AMIS_67410 2df5ee2166f0f2d714decaf206fa6ae3 247 Gene3D G3DSA:3.40.1010.10 1 110 1.6E-29 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 AMIS_67410 2df5ee2166f0f2d714decaf206fa6ae3 247 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 76 109 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AMIS_67410 2df5ee2166f0f2d714decaf206fa6ae3 247 SUPERFAMILY SSF53790 2 231 7.2E-64 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 AMIS_76130 66c050284151c44fc1caba7a27262423 291 Pfam PF01551 Peptidase family M23 164 269 6.4E-24 T 14-10-2018 IPR016047 Peptidase M23 AMIS_76130 66c050284151c44fc1caba7a27262423 291 SUPERFAMILY SSF51261 141 280 2.14E-36 T 14-10-2018 IPR011055 Duplicated hybrid motif AMIS_76130 66c050284151c44fc1caba7a27262423 291 Gene3D G3DSA:2.70.70.10 137 288 8.4E-38 T 14-10-2018 IPR011055 Duplicated hybrid motif AMIS_10510 7b7573c1b21915e091a24df6beb5ab72 333 SUPERFAMILY SSF88659 175 248 1.54E-17 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_10510 7b7573c1b21915e091a24df6beb5ab72 333 Pfam PF00140 Sigma-70 factor, region 1.2 37 70 9.8E-12 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_10510 7b7573c1b21915e091a24df6beb5ab72 333 Pfam PF04545 Sigma-70, region 4 270 323 1.1E-12 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 AMIS_10510 7b7573c1b21915e091a24df6beb5ab72 333 SUPERFAMILY SSF88659 232 327 2.62E-24 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_10510 7b7573c1b21915e091a24df6beb5ab72 333 Pfam PF04539 Sigma-70 region 3 181 256 2.6E-22 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 AMIS_10510 7b7573c1b21915e091a24df6beb5ab72 333 PRINTS PR00046 Major sigma-70 factor signature 295 310 6.4E-22 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMIS_10510 7b7573c1b21915e091a24df6beb5ab72 333 PRINTS PR00046 Major sigma-70 factor signature 274 286 6.4E-22 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMIS_10510 7b7573c1b21915e091a24df6beb5ab72 333 PRINTS PR00046 Major sigma-70 factor signature 150 158 6.4E-22 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMIS_10510 7b7573c1b21915e091a24df6beb5ab72 333 PRINTS PR00046 Major sigma-70 factor signature 126 139 6.4E-22 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMIS_10510 7b7573c1b21915e091a24df6beb5ab72 333 PRINTS PR00046 Major sigma-70 factor signature 310 321 6.4E-22 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMIS_10510 7b7573c1b21915e091a24df6beb5ab72 333 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 295 321 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMIS_10510 7b7573c1b21915e091a24df6beb5ab72 333 SUPERFAMILY SSF88946 37 172 2.22E-49 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_10510 7b7573c1b21915e091a24df6beb5ab72 333 Pfam PF04542 Sigma-70 region 2 102 171 1.7E-21 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_10510 7b7573c1b21915e091a24df6beb5ab72 333 Gene3D G3DSA:1.10.10.10 252 330 3.3E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_10510 7b7573c1b21915e091a24df6beb5ab72 333 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 99 323 1.1E-32 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_10510 7b7573c1b21915e091a24df6beb5ab72 333 Gene3D G3DSA:1.20.120.1810 36 171 1.5E-47 T 14-10-2018 AMIS_10510 7b7573c1b21915e091a24df6beb5ab72 333 Gene3D G3DSA:1.10.10.10 175 250 1.1E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_80740 271cae900e51e396761286f4dfc413f6 401 Pfam PF13191 AAA ATPase domain 19 209 1.3E-21 T 14-10-2018 AMIS_80740 271cae900e51e396761286f4dfc413f6 401 SUPERFAMILY SSF52540 6 289 1.12E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_80740 271cae900e51e396761286f4dfc413f6 401 Gene3D G3DSA:3.40.50.300 11 213 3.3E-7 T 14-10-2018 AMIS_17120 3c7c7409d8152793a8dfe1892b107321 676 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 456 470 3.0E-6 T 14-10-2018 AMIS_17120 3c7c7409d8152793a8dfe1892b107321 676 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 492 508 3.0E-6 T 14-10-2018 AMIS_17120 3c7c7409d8152793a8dfe1892b107321 676 SUPERFAMILY SSF52317 413 663 7.69E-25 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_17120 3c7c7409d8152793a8dfe1892b107321 676 Gene3D G3DSA:3.60.120.10 9 373 4.2E-114 T 14-10-2018 IPR005801 ADC synthase GO:0009058 AMIS_17120 3c7c7409d8152793a8dfe1892b107321 676 Pfam PF00117 Glutamine amidotransferase class-I 422 532 1.0E-14 T 14-10-2018 IPR017926 Glutamine amidotransferase AMIS_17120 3c7c7409d8152793a8dfe1892b107321 676 Pfam PF00425 chorismate binding enzyme 108 362 1.1E-39 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal AMIS_17120 3c7c7409d8152793a8dfe1892b107321 676 SUPERFAMILY SSF56322 67 370 1.7E-57 T 14-10-2018 IPR005801 ADC synthase GO:0009058 AMIS_48110 d1b5aa918d9c4131d17cca4a1e27fb5c 367 Gene3D G3DSA:3.40.50.1820 20 237 2.7E-47 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_48110 d1b5aa918d9c4131d17cca4a1e27fb5c 367 Gene3D G3DSA:3.40.50.1820 263 367 2.8E-11 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_48110 d1b5aa918d9c4131d17cca4a1e27fb5c 367 Pfam PF03583 Secretory lipase 113 367 1.7E-22 T 14-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 AMIS_48110 d1b5aa918d9c4131d17cca4a1e27fb5c 367 PIRSF PIRSF029171 3 367 9.7E-69 T 14-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 AMIS_48110 d1b5aa918d9c4131d17cca4a1e27fb5c 367 SUPERFAMILY SSF53474 47 365 8.25E-24 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_6040 3e8f39554152a6f1803d3479c775ada3 216 SUPERFAMILY SSF52166 3 203 1.44E-74 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 AMIS_6040 3e8f39554152a6f1803d3479c775ada3 216 Gene3D G3DSA:3.40.1370.10 2 208 4.4E-72 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 AMIS_6040 3e8f39554152a6f1803d3479c775ada3 216 Pfam PF00573 Ribosomal protein L4/L1 family 17 203 1.3E-62 T 14-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 AMIS_6040 3e8f39554152a6f1803d3479c775ada3 216 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 17 202 1.4E-69 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_6040 3e8f39554152a6f1803d3479c775ada3 216 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 9 208 33.144 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_2440 5b52eb36fb5841608d10d73fccb329e1 252 Pfam PF01833 IPT/TIG domain 168 237 3.0E-8 T 14-10-2018 IPR002909 IPT domain AMIS_2440 5b52eb36fb5841608d10d73fccb329e1 252 SUPERFAMILY SSF81296 166 242 1.13E-12 T 14-10-2018 IPR014756 Immunoglobulin E-set AMIS_2440 5b52eb36fb5841608d10d73fccb329e1 252 Gene3D G3DSA:2.60.40.10 164 250 1.7E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_17020 0028b726cbcf4b75c5564bbfb72125f2 140 Pfam PF08044 Domain of unknown function (DUF1707) 8 59 5.1E-21 T 14-10-2018 IPR012551 Protein of unknown function DUF1707 AMIS_33410 a22aae11e1919bbc37f6004bb68da5f2 155 SUPERFAMILY SSF52833 5 152 4.64E-43 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMIS_33410 a22aae11e1919bbc37f6004bb68da5f2 155 Pfam PF00578 AhpC/TSA family 6 129 5.0E-34 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AMIS_33410 a22aae11e1919bbc37f6004bb68da5f2 155 PIRSF PIRSF000239 2 154 2.4E-17 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AMIS_33410 a22aae11e1919bbc37f6004bb68da5f2 155 Gene3D G3DSA:3.40.30.10 2 154 1.9E-44 T 14-10-2018 AMIS_31320 9962dbdaac8b064d4edee912eaa613ac 115 Pfam PF13546 DDE superfamily endonuclease 23 93 3.6E-14 T 14-10-2018 IPR038721 Transposase IS701-like, DDE domain AMIS_40820 857b0f46b1ddb5c51329ed1b2ec7be2a 277 Pfam PF03779 SPW repeat 83 123 3.1E-7 T 14-10-2018 IPR005530 SPW repeat AMIS_22320 abdb5e8c6247143d565c1163ef3d37b8 580 SMART SM00641 72 184 7.4E-29 T 14-10-2018 IPR018077 Glycoside hydrolase, family 25 subgroup AMIS_22320 abdb5e8c6247143d565c1163ef3d37b8 580 SUPERFAMILY SSF69318 291 551 6.8E-24 T 14-10-2018 AMIS_22320 abdb5e8c6247143d565c1163ef3d37b8 580 Pfam PF01183 Glycosyl hydrolases family 25 75 262 4.2E-46 T 14-10-2018 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 AMIS_22320 abdb5e8c6247143d565c1163ef3d37b8 580 Gene3D G3DSA:3.20.20.80 69 286 3.4E-77 T 14-10-2018 AMIS_22320 abdb5e8c6247143d565c1163ef3d37b8 580 SUPERFAMILY SSF51445 69 284 1.31E-65 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_8780 8f266932520082bbcf4158a4d58a37fa 271 Pfam PF13302 Acetyltransferase (GNAT) domain 95 234 1.8E-23 T 14-10-2018 IPR000182 GNAT domain AMIS_8780 8f266932520082bbcf4158a4d58a37fa 271 Gene3D G3DSA:3.40.630.30 89 243 6.8E-35 T 14-10-2018 AMIS_8780 8f266932520082bbcf4158a4d58a37fa 271 SUPERFAMILY SSF55729 90 258 1.7E-34 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_61500 7ffc3357bb05ae220bd5e033a3119a15 352 Pfam PF07687 Peptidase dimerisation domain 167 264 2.5E-13 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain AMIS_61500 7ffc3357bb05ae220bd5e033a3119a15 352 SUPERFAMILY SSF55031 167 269 2.54E-19 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AMIS_61500 7ffc3357bb05ae220bd5e033a3119a15 352 Gene3D G3DSA:3.40.630.10 18 341 1.4E-100 T 14-10-2018 AMIS_61500 7ffc3357bb05ae220bd5e033a3119a15 352 Pfam PF01546 Peptidase family M20/M25/M40 67 350 2.3E-20 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 AMIS_61500 7ffc3357bb05ae220bd5e033a3119a15 352 TIGRFAM TIGR01900 dapE-gram_pos: succinyl-diaminopimelate desuccinylase 7 352 3.3E-159 T 14-10-2018 IPR010174 Succinyl-diaminopimelate desuccinylase, DapE GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 AMIS_61500 7ffc3357bb05ae220bd5e033a3119a15 352 SUPERFAMILY SSF53187 9 351 2.13E-45 T 14-10-2018 AMIS_61500 7ffc3357bb05ae220bd5e033a3119a15 352 Gene3D G3DSA:3.30.70.360 167 275 1.4E-100 T 14-10-2018 AMIS_75600 20cc773526668284b6deffb9c53fa59c 417 Pfam PF13180 PDZ domain 332 412 1.5E-18 T 14-10-2018 IPR001478 PDZ domain GO:0005515 AMIS_75600 20cc773526668284b6deffb9c53fa59c 417 SMART SM00228 331 403 3.2E-8 T 14-10-2018 IPR001478 PDZ domain GO:0005515 AMIS_75600 20cc773526668284b6deffb9c53fa59c 417 Pfam PF13365 Trypsin-like peptidase domain 147 287 5.1E-33 T 14-10-2018 AMIS_75600 20cc773526668284b6deffb9c53fa59c 417 SUPERFAMILY SSF50156 312 412 1.3E-17 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 AMIS_75600 20cc773526668284b6deffb9c53fa59c 417 Gene3D G3DSA:2.40.10.10 119 207 3.4E-26 T 14-10-2018 AMIS_75600 20cc773526668284b6deffb9c53fa59c 417 Gene3D G3DSA:2.30.42.10 330 417 1.3E-21 T 14-10-2018 AMIS_75600 20cc773526668284b6deffb9c53fa59c 417 SUPERFAMILY SSF50494 126 327 1.09E-53 T 14-10-2018 IPR009003 Peptidase S1, PA clan AMIS_75600 20cc773526668284b6deffb9c53fa59c 417 PRINTS PR00834 HtrA/DegQ protease family signature 178 198 8.0E-47 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMIS_75600 20cc773526668284b6deffb9c53fa59c 417 PRINTS PR00834 HtrA/DegQ protease family signature 156 168 8.0E-47 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMIS_75600 20cc773526668284b6deffb9c53fa59c 417 PRINTS PR00834 HtrA/DegQ protease family signature 280 297 8.0E-47 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMIS_75600 20cc773526668284b6deffb9c53fa59c 417 PRINTS PR00834 HtrA/DegQ protease family signature 218 242 8.0E-47 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMIS_75600 20cc773526668284b6deffb9c53fa59c 417 PRINTS PR00834 HtrA/DegQ protease family signature 361 373 8.0E-47 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMIS_75600 20cc773526668284b6deffb9c53fa59c 417 PRINTS PR00834 HtrA/DegQ protease family signature 258 275 8.0E-47 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMIS_75600 20cc773526668284b6deffb9c53fa59c 417 Gene3D G3DSA:2.40.10.10 208 328 3.2E-42 T 14-10-2018 AMIS_75670 8fab19df6781683480c2c79667d42714 191 Gene3D G3DSA:1.10.340.30 11 190 5.7E-71 T 14-10-2018 AMIS_75670 8fab19df6781683480c2c79667d42714 191 SUPERFAMILY SSF48150 12 186 1.73E-67 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AMIS_75670 8fab19df6781683480c2c79667d42714 191 Pfam PF03352 Methyladenine glycosylase 16 185 9.6E-67 T 14-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 AMIS_75670 8fab19df6781683480c2c79667d42714 191 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 13 187 1.9E-76 T 14-10-2018 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 AMIS_40960 280296bd0723303d96cc2fd215084d33 258 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 43 70 - T 14-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 AMIS_40960 280296bd0723303d96cc2fd215084d33 258 SUPERFAMILY SSF53335 11 190 5.31E-32 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_40960 280296bd0723303d96cc2fd215084d33 258 Pfam PF08241 Methyltransferase domain 44 132 3.8E-17 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 AMIS_40960 280296bd0723303d96cc2fd215084d33 258 Gene3D G3DSA:3.40.50.150 11 237 1.9E-34 T 14-10-2018 AMIS_4950 34423958141985491d713fd01a899b9b 234 Gene3D G3DSA:1.10.530.10 20 118 3.9E-38 T 14-10-2018 AMIS_4950 34423958141985491d713fd01a899b9b 234 Pfam PF01476 LysM domain 188 234 3.7E-10 T 14-10-2018 IPR018392 LysM domain AMIS_4950 34423958141985491d713fd01a899b9b 234 SMART SM00257 187 234 0.0061 T 14-10-2018 IPR018392 LysM domain AMIS_4950 34423958141985491d713fd01a899b9b 234 SUPERFAMILY SSF54106 185 234 2.75E-6 T 14-10-2018 AMIS_4950 34423958141985491d713fd01a899b9b 234 Pfam PF06737 Transglycosylase-like domain 37 111 1.5E-35 T 14-10-2018 IPR010618 Transglycosylase-like AMIS_4950 34423958141985491d713fd01a899b9b 234 Gene3D G3DSA:3.10.350.10 185 233 1.3E-9 T 14-10-2018 IPR036779 LysM domain superfamily AMIS_4950 34423958141985491d713fd01a899b9b 234 SUPERFAMILY SSF53955 35 115 2.69E-32 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily AMIS_44610 ef0f11bb7205892167a588a836297e11 277 Gene3D G3DSA:3.40.50.300 2 259 4.0E-60 T 14-10-2018 AMIS_44610 ef0f11bb7205892167a588a836297e11 277 Pfam PF00005 ABC transporter 22 172 1.7E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_44610 ef0f11bb7205892167a588a836297e11 277 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_44610 ef0f11bb7205892167a588a836297e11 277 SUPERFAMILY SSF52540 5 235 3.08E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_44610 ef0f11bb7205892167a588a836297e11 277 SMART SM00382 30 221 7.3E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_31270 c1c2cf4b0113d94548b9c48f3521234f 330 Pfam PF00296 Luciferase-like monooxygenase 17 297 6.6E-37 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMIS_31270 c1c2cf4b0113d94548b9c48f3521234f 330 Gene3D G3DSA:3.20.20.30 2 330 4.8E-87 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_31270 c1c2cf4b0113d94548b9c48f3521234f 330 SUPERFAMILY SSF51679 5 328 3.53E-74 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_31270 c1c2cf4b0113d94548b9c48f3521234f 330 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 6 327 5.0E-120 T 14-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 AMIS_4180 1a4fb55490ac67de7d5e2312e2ae9023 479 SUPERFAMILY SSF53335 20 142 5.43E-8 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_4180 1a4fb55490ac67de7d5e2312e2ae9023 479 Gene3D G3DSA:3.40.50.150 13 189 1.3E-7 T 14-10-2018 AMIS_35700 d72bc5924ff0b79fb51efdb078be558a 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 3.2E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_35700 d72bc5924ff0b79fb51efdb078be558a 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 3.2E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_35700 d72bc5924ff0b79fb51efdb078be558a 204 Gene3D G3DSA:1.10.357.10 62 204 1.1E-19 T 14-10-2018 AMIS_35700 d72bc5924ff0b79fb51efdb078be558a 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 68 9.1E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_35700 d72bc5924ff0b79fb51efdb078be558a 204 SUPERFAMILY SSF46689 13 79 1.8E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_35700 d72bc5924ff0b79fb51efdb078be558a 204 Gene3D G3DSA:1.10.10.60 16 61 1.6E-19 T 14-10-2018 AMIS_35700 d72bc5924ff0b79fb51efdb078be558a 204 ProSitePatterns PS01081 TetR-type HTH domain signature. 35 66 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMIS_35700 d72bc5924ff0b79fb51efdb078be558a 204 SUPERFAMILY SSF48498 89 192 1.37E-7 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_74380 78af0b739076321cc18c6e6309b978b8 254 Pfam PF13490 Putative zinc-finger 193 227 3.0E-7 T 14-10-2018 IPR027383 Putative zinc-finger AMIS_74380 78af0b739076321cc18c6e6309b978b8 254 Gene3D G3DSA:1.10.1740.10 6 96 5.3E-17 T 14-10-2018 AMIS_74380 78af0b739076321cc18c6e6309b978b8 254 Gene3D G3DSA:1.10.10.10 108 182 1.6E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_74380 78af0b739076321cc18c6e6309b978b8 254 SUPERFAMILY SSF88659 103 181 4.11E-10 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_74380 78af0b739076321cc18c6e6309b978b8 254 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 25 178 2.9E-17 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_74380 78af0b739076321cc18c6e6309b978b8 254 Pfam PF04542 Sigma-70 region 2 29 93 5.0E-12 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_74380 78af0b739076321cc18c6e6309b978b8 254 Pfam PF08281 Sigma-70, region 4 128 174 4.8E-7 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_74380 78af0b739076321cc18c6e6309b978b8 254 SUPERFAMILY SSF88946 6 109 4.71E-20 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_73250 9c3315f482c386cde8c726483321954b 342 SUPERFAMILY SSF54211 221 327 1.37E-19 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMIS_73250 9c3315f482c386cde8c726483321954b 342 Gene3D G3DSA:2.30.42.10 136 220 1.3E-16 T 14-10-2018 AMIS_73250 9c3315f482c386cde8c726483321954b 342 SMART SM00228 128 192 1.5E-4 T 14-10-2018 IPR001478 PDZ domain GO:0005515 AMIS_73250 9c3315f482c386cde8c726483321954b 342 Gene3D G3DSA:3.30.230.10 221 332 1.8E-14 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMIS_73250 9c3315f482c386cde8c726483321954b 342 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 235 324 5.1E-8 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 AMIS_73250 9c3315f482c386cde8c726483321954b 342 SUPERFAMILY SSF50156 137 233 1.3E-14 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 AMIS_73250 9c3315f482c386cde8c726483321954b 342 Pfam PF13180 PDZ domain 138 199 1.4E-11 T 14-10-2018 IPR001478 PDZ domain GO:0005515 AMIS_42400 4eb12af2b12c72f908f11a1bb45fd180 199 Gene3D G3DSA:1.10.357.10 2 190 1.8E-12 T 14-10-2018 AMIS_42400 4eb12af2b12c72f908f11a1bb45fd180 199 SUPERFAMILY SSF46689 5 50 9.23E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_34810 01fc7ccbb6fa3232a976520b1d2bdeb6 309 SMART SM00382 29 207 2.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_34810 01fc7ccbb6fa3232a976520b1d2bdeb6 309 Gene3D G3DSA:3.40.50.300 1 231 5.3E-57 T 14-10-2018 AMIS_34810 01fc7ccbb6fa3232a976520b1d2bdeb6 309 SUPERFAMILY SSF52540 3 223 1.5E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_34810 01fc7ccbb6fa3232a976520b1d2bdeb6 309 Pfam PF00005 ABC transporter 21 159 1.7E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_34810 01fc7ccbb6fa3232a976520b1d2bdeb6 309 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_68950 9e73574755e7df39099c4a8fb6792f6f 462 SUPERFAMILY SSF52540 245 437 2.01E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_68950 9e73574755e7df39099c4a8fb6792f6f 462 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 45 405 3.6E-137 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 AMIS_68950 9e73574755e7df39099c4a8fb6792f6f 462 Gene3D G3DSA:3.40.50.11060 54 176 7.3E-43 T 14-10-2018 AMIS_68950 9e73574755e7df39099c4a8fb6792f6f 462 Pfam PF13167 GTP-binding GTPase N-terminal 61 149 1.5E-33 T 14-10-2018 IPR025121 GTPase HflX, N-terminal AMIS_68950 9e73574755e7df39099c4a8fb6792f6f 462 PIRSF PIRSF006809 37 461 2.4E-161 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 AMIS_68950 9e73574755e7df39099c4a8fb6792f6f 462 PIRSF PIRSF006809 9 45 110.0 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 AMIS_68950 9e73574755e7df39099c4a8fb6792f6f 462 Pfam PF01926 50S ribosome-binding GTPase 246 364 2.7E-19 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 AMIS_68950 9e73574755e7df39099c4a8fb6792f6f 462 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 313 331 2.1E-7 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 AMIS_68950 9e73574755e7df39099c4a8fb6792f6f 462 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 246 266 2.1E-7 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 AMIS_68950 9e73574755e7df39099c4a8fb6792f6f 462 Gene3D G3DSA:3.40.50.300 243 409 2.8E-41 T 14-10-2018 AMIS_68950 9e73574755e7df39099c4a8fb6792f6f 462 Pfam PF16360 GTP-binding GTPase Middle Region 151 238 8.2E-32 T 14-10-2018 IPR032305 GTP-binding protein, middle domain AMIS_68950 9e73574755e7df39099c4a8fb6792f6f 462 Hamap MF_00900 GTPase HflX [hflX]. 64 434 50.73 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 AMIS_78520 3ff0e44fcb575281dba4459d47bdf93b 1046 Gene3D G3DSA:1.10.8.60 7 229 1.4E-94 T 14-10-2018 AMIS_78520 3ff0e44fcb575281dba4459d47bdf93b 1046 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 4 362 4.2E-115 T 14-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 AMIS_78520 3ff0e44fcb575281dba4459d47bdf93b 1046 SUPERFAMILY SSF52540 32 222 1.02E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_78520 3ff0e44fcb575281dba4459d47bdf93b 1046 Gene3D G3DSA:3.40.50.300 12 178 1.4E-94 T 14-10-2018 AMIS_78520 3ff0e44fcb575281dba4459d47bdf93b 1046 Gene3D G3DSA:1.20.272.10 244 365 2.1E-5 T 14-10-2018 AMIS_78520 3ff0e44fcb575281dba4459d47bdf93b 1046 Pfam PF13177 DNA polymerase III, delta subunit 19 177 7.1E-38 T 14-10-2018 AMIS_78520 3ff0e44fcb575281dba4459d47bdf93b 1046 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 237 363 4.1E-13 T 14-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 AMIS_78520 3ff0e44fcb575281dba4459d47bdf93b 1046 SMART SM00382 36 180 2.5E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_78520 3ff0e44fcb575281dba4459d47bdf93b 1046 SUPERFAMILY SSF48019 246 363 1.36E-18 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AMIS_7400 42503825c4616ebfc0f5b36c8f72ed1a 419 SUPERFAMILY SSF51445 121 388 7.15E-27 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_7400 42503825c4616ebfc0f5b36c8f72ed1a 419 Gene3D G3DSA:3.20.20.80 115 408 2.8E-52 T 14-10-2018 AMIS_7400 42503825c4616ebfc0f5b36c8f72ed1a 419 Pfam PF02156 Glycosyl hydrolase family 26 204 304 3.6E-6 T 14-10-2018 IPR022790 Glycosyl hydrolase family 26 domain GO:0004553 AMIS_59920 7e3afa5dd6f521972bde41e8c4a12065 464 Gene3D G3DSA:3.40.309.10 205 384 9.6E-167 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AMIS_59920 7e3afa5dd6f521972bde41e8c4a12065 464 Pfam PF00171 Aldehyde dehydrogenase family 7 251 8.3E-29 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AMIS_59920 7e3afa5dd6f521972bde41e8c4a12065 464 SUPERFAMILY SSF53720 6 436 7.33E-79 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMIS_59920 7e3afa5dd6f521972bde41e8c4a12065 464 Gene3D G3DSA:3.40.605.10 6 429 9.6E-167 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AMIS_55110 329fb9574aa14e3c223314bdd150c316 481 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 208 432 1.2E-63 T 14-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 AMIS_55110 329fb9574aa14e3c223314bdd150c316 481 SUPERFAMILY SSF51735 17 272 2.99E-75 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_55110 329fb9574aa14e3c223314bdd150c316 481 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 31 183 1.8E-29 T 14-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 AMIS_55110 329fb9574aa14e3c223314bdd150c316 481 PRINTS PR00084 Mannitol dehydrogenase signature 32 42 8.8E-20 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AMIS_55110 329fb9574aa14e3c223314bdd150c316 481 PRINTS PR00084 Mannitol dehydrogenase signature 174 187 8.8E-20 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AMIS_55110 329fb9574aa14e3c223314bdd150c316 481 PRINTS PR00084 Mannitol dehydrogenase signature 239 254 8.8E-20 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AMIS_55110 329fb9574aa14e3c223314bdd150c316 481 PRINTS PR00084 Mannitol dehydrogenase signature 209 222 8.8E-20 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AMIS_55110 329fb9574aa14e3c223314bdd150c316 481 Gene3D G3DSA:3.40.50.720 11 272 7.5E-82 T 14-10-2018 AMIS_55110 329fb9574aa14e3c223314bdd150c316 481 Gene3D G3DSA:1.10.1040.10 273 480 1.0E-57 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AMIS_55110 329fb9574aa14e3c223314bdd150c316 481 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 209 221 - T 14-10-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AMIS_55110 329fb9574aa14e3c223314bdd150c316 481 SUPERFAMILY SSF48179 274 478 4.08E-48 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMIS_16910 0b4aacd5c67ffaddeff2a3de5bb9d43a 450 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 11 446 5.3E-89 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AMIS_16910 0b4aacd5c67ffaddeff2a3de5bb9d43a 450 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 9 448 26.565 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AMIS_16910 0b4aacd5c67ffaddeff2a3de5bb9d43a 450 SUPERFAMILY SSF53623 110 298 1.37E-34 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AMIS_16910 0b4aacd5c67ffaddeff2a3de5bb9d43a 450 Gene3D G3DSA:3.90.190.20 308 444 1.6E-28 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AMIS_16910 0b4aacd5c67ffaddeff2a3de5bb9d43a 450 SUPERFAMILY SSF51984 5 99 1.29E-7 T 14-10-2018 AMIS_16910 0b4aacd5c67ffaddeff2a3de5bb9d43a 450 SUPERFAMILY SSF53244 307 447 2.15E-26 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AMIS_16910 0b4aacd5c67ffaddeff2a3de5bb9d43a 450 Gene3D G3DSA:3.40.50.720 4 99 6.2E-15 T 14-10-2018 AMIS_16910 0b4aacd5c67ffaddeff2a3de5bb9d43a 450 Gene3D G3DSA:3.40.1190.10 100 307 6.6E-40 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AMIS_16910 0b4aacd5c67ffaddeff2a3de5bb9d43a 450 Pfam PF08245 Mur ligase middle domain 116 283 1.1E-18 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AMIS_30870 746903f650167d7d2eb893933a9c73fc 219 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 68 1.7E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_30870 746903f650167d7d2eb893933a9c73fc 219 Gene3D G3DSA:1.10.357.10 14 218 2.7E-64 T 14-10-2018 AMIS_30870 746903f650167d7d2eb893933a9c73fc 219 SUPERFAMILY SSF46689 11 91 5.64E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_78660 0c08a33de04a7bf367413a7f006126f7 320 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 29 312 1.1E-76 T 14-10-2018 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 AMIS_78660 0c08a33de04a7bf367413a7f006126f7 320 SUPERFAMILY SSF100950 2 312 3.35E-83 T 14-10-2018 IPR037171 NagB/RpiA transferase-like AMIS_78660 0c08a33de04a7bf367413a7f006126f7 320 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 2 313 1.5E-94 T 14-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 AMIS_78660 0c08a33de04a7bf367413a7f006126f7 320 Pfam PF01008 Initiation factor 2 subunit family 43 309 5.5E-49 T 14-10-2018 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 AMIS_78660 0c08a33de04a7bf367413a7f006126f7 320 Gene3D G3DSA:1.20.120.1840 1 172 1.0E-38 T 14-10-2018 AMIS_78660 0c08a33de04a7bf367413a7f006126f7 320 Gene3D G3DSA:3.40.50.10470 173 318 2.1E-40 T 14-10-2018 AMIS_37740 3afa635b1879b9dc5baa15e9549db594 784 PRINTS PR00133 Glycosyl hydrolase family 3 signature 89 105 2.0E-22 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMIS_37740 3afa635b1879b9dc5baa15e9549db594 784 PRINTS PR00133 Glycosyl hydrolase family 3 signature 265 283 2.0E-22 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMIS_37740 3afa635b1879b9dc5baa15e9549db594 784 PRINTS PR00133 Glycosyl hydrolase family 3 signature 158 174 2.0E-22 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMIS_37740 3afa635b1879b9dc5baa15e9549db594 784 PRINTS PR00133 Glycosyl hydrolase family 3 signature 112 131 2.0E-22 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMIS_37740 3afa635b1879b9dc5baa15e9549db594 784 PRINTS PR00133 Glycosyl hydrolase family 3 signature 189 205 2.0E-22 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMIS_37740 3afa635b1879b9dc5baa15e9549db594 784 SMART SM01217 680 749 9.2E-27 T 14-10-2018 IPR026891 Fibronectin type III-like domain AMIS_37740 3afa635b1879b9dc5baa15e9549db594 784 Gene3D G3DSA:2.60.40.10 650 767 6.1E-31 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_37740 3afa635b1879b9dc5baa15e9549db594 784 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 3 345 9.2E-71 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMIS_37740 3afa635b1879b9dc5baa15e9549db594 784 SUPERFAMILY SSF51445 1 387 3.05E-90 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_37740 3afa635b1879b9dc5baa15e9549db594 784 Gene3D G3DSA:3.20.20.300 1 363 7.7E-98 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 AMIS_37740 3afa635b1879b9dc5baa15e9549db594 784 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 406 643 8.7E-39 T 14-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 AMIS_37740 3afa635b1879b9dc5baa15e9549db594 784 Pfam PF14310 Fibronectin type III-like domain 680 748 2.0E-19 T 14-10-2018 IPR026891 Fibronectin type III-like domain AMIS_37740 3afa635b1879b9dc5baa15e9549db594 784 SUPERFAMILY SSF52279 420 646 4.71E-40 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 AMIS_37740 3afa635b1879b9dc5baa15e9549db594 784 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 265 282 - T 14-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 AMIS_37740 3afa635b1879b9dc5baa15e9549db594 784 Gene3D G3DSA:3.40.50.1700 374 644 3.0E-55 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 AMIS_52330 b74c10d6edec816f3a53e22858d3ac2e 334 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 173 328 3.6E-39 T 14-10-2018 IPR000160 GGDEF domain AMIS_52330 b74c10d6edec816f3a53e22858d3ac2e 334 SMART SM00267 166 330 5.8E-51 T 14-10-2018 IPR000160 GGDEF domain AMIS_52330 b74c10d6edec816f3a53e22858d3ac2e 334 Gene3D G3DSA:3.30.70.270 163 330 1.3E-46 T 14-10-2018 AMIS_52330 b74c10d6edec816f3a53e22858d3ac2e 334 SUPERFAMILY SSF55073 182 327 1.88E-40 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_52330 b74c10d6edec816f3a53e22858d3ac2e 334 Pfam PF00990 Diguanylate cyclase, GGDEF domain 177 325 3.3E-40 T 14-10-2018 IPR000160 GGDEF domain AMIS_6970 b0ad7a96b0d5478a128a1a7ce4e27593 318 Gene3D G3DSA:3.90.79.10 7 139 5.6E-22 T 14-10-2018 AMIS_6970 b0ad7a96b0d5478a128a1a7ce4e27593 318 ProSitePatterns PS00893 Nudix box signature. 47 68 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMIS_6970 b0ad7a96b0d5478a128a1a7ce4e27593 318 SUPERFAMILY SSF55811 174 300 3.93E-22 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMIS_6970 b0ad7a96b0d5478a128a1a7ce4e27593 318 Pfam PF00293 NUDIX domain 175 303 5.0E-16 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMIS_6970 b0ad7a96b0d5478a128a1a7ce4e27593 318 Pfam PF00293 NUDIX domain 12 132 2.4E-16 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMIS_6970 b0ad7a96b0d5478a128a1a7ce4e27593 318 Gene3D G3DSA:3.90.79.10 170 313 8.2E-21 T 14-10-2018 AMIS_6970 b0ad7a96b0d5478a128a1a7ce4e27593 318 SUPERFAMILY SSF55811 10 140 2.98E-22 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMIS_6970 b0ad7a96b0d5478a128a1a7ce4e27593 318 ProSitePatterns PS00893 Nudix box signature. 209 230 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMIS_15880 fa0875fca393cfb003e4add0ca3d7c08 394 SUPERFAMILY SSF81301 215 384 4.25E-38 T 14-10-2018 AMIS_15880 fa0875fca393cfb003e4add0ca3d7c08 394 SUPERFAMILY SSF52540 1 191 1.11E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_15880 fa0875fca393cfb003e4add0ca3d7c08 394 Gene3D G3DSA:3.40.50.300 1 199 2.8E-63 T 14-10-2018 AMIS_15880 fa0875fca393cfb003e4add0ca3d7c08 394 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 187 2.5E-43 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 AMIS_15880 fa0875fca393cfb003e4add0ca3d7c08 394 Pfam PF01121 Dephospho-CoA kinase 4 179 2.8E-53 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 AMIS_15880 fa0875fca393cfb003e4add0ca3d7c08 394 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 1 196 24.997 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 AMIS_15880 fa0875fca393cfb003e4add0ca3d7c08 394 Pfam PF04229 GrpB protein 213 377 1.1E-40 T 14-10-2018 IPR007344 GrpB/Dephospho-CoA kinase AMIS_15880 fa0875fca393cfb003e4add0ca3d7c08 394 Gene3D G3DSA:3.30.460.10 209 385 2.7E-36 T 14-10-2018 AMIS_68420 d7b508423ed59706c64e2140d7af5e42 641 SUPERFAMILY SSF52922 495 626 4.32E-25 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AMIS_68420 d7b508423ed59706c64e2140d7af5e42 641 Gene3D G3DSA:3.40.50.920 496 633 5.5E-27 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AMIS_68420 d7b508423ed59706c64e2140d7af5e42 641 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 13 625 1.1E-187 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AMIS_68420 d7b508423ed59706c64e2140d7af5e42 641 SUPERFAMILY SSF52518 317 485 5.73E-53 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold AMIS_68420 d7b508423ed59706c64e2140d7af5e42 641 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 11 627 41.044 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AMIS_68420 d7b508423ed59706c64e2140d7af5e42 641 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 12 287 1.2E-108 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AMIS_68420 d7b508423ed59706c64e2140d7af5e42 641 SUPERFAMILY SSF52518 11 354 2.32E-68 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold AMIS_68420 d7b508423ed59706c64e2140d7af5e42 641 Pfam PF02780 Transketolase, C-terminal domain 501 618 1.0E-23 T 14-10-2018 IPR033248 Transketolase, C-terminal domain AMIS_68420 d7b508423ed59706c64e2140d7af5e42 641 SMART SM00861 323 488 1.5E-53 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AMIS_68420 d7b508423ed59706c64e2140d7af5e42 641 ProSitePatterns PS00802 Transketolase signature 2. 429 445 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AMIS_68420 d7b508423ed59706c64e2140d7af5e42 641 Gene3D G3DSA:3.40.50.970 321 493 1.3E-57 T 14-10-2018 AMIS_68420 d7b508423ed59706c64e2140d7af5e42 641 Pfam PF02779 Transketolase, pyrimidine binding domain 323 484 1.3E-35 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AMIS_11950 794ec366240d418ce7adaf83c04a30d6 569 SUPERFAMILY SSF89550 86 407 9.42E-17 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AMIS_11950 794ec366240d418ce7adaf83c04a30d6 569 SMART SM00481 90 165 3.6E-11 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal AMIS_42170 e1887612c0bb32c015bafc163be9b442 357 Pfam PF12275 Protein of unknown function (DUF3616) 23 351 3.9E-120 T 14-10-2018 IPR022060 Protein of unknown function DUF3616 AMIS_57760 59964de5e05ebb040ea774208898e0f8 400 Gene3D G3DSA:3.40.50.410 220 367 1.2E-7 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMIS_57760 59964de5e05ebb040ea774208898e0f8 400 SMART SM00327 227 389 9.9E-5 T 14-10-2018 IPR002035 von Willebrand factor, type A AMIS_57760 59964de5e05ebb040ea774208898e0f8 400 PIRSF PIRSF010256 6 399 4.3E-83 T 14-10-2018 IPR011195 Uncharacterised conserved protein UCP010256 AMIS_57760 59964de5e05ebb040ea774208898e0f8 400 Pfam PF05762 VWA domain containing CoxE-like protein 172 387 9.9E-51 T 14-10-2018 IPR008912 Uncharacterised protein family CoxE-like AMIS_57760 59964de5e05ebb040ea774208898e0f8 400 SUPERFAMILY SSF53300 227 356 4.23E-12 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMIS_62980 19a35d43e8bd1a5dea065860e276dbce 229 SMART SM00448 2 112 4.4E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_62980 19a35d43e8bd1a5dea065860e276dbce 229 SUPERFAMILY SSF52172 1 183 3.98E-37 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_62980 19a35d43e8bd1a5dea065860e276dbce 229 SMART SM00862 149 225 2.6E-28 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_62980 19a35d43e8bd1a5dea065860e276dbce 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 225 5.4E-27 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_62980 19a35d43e8bd1a5dea065860e276dbce 229 Gene3D G3DSA:1.10.10.10 129 229 1.6E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_62980 19a35d43e8bd1a5dea065860e276dbce 229 Pfam PF00072 Response regulator receiver domain 4 112 2.9E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_62980 19a35d43e8bd1a5dea065860e276dbce 229 Gene3D G3DSA:3.40.50.2300 1 128 3.4E-32 T 14-10-2018 AMIS_60530 3c5b3de9fc7065f67c5b3400377c300a 310 Pfam PF01636 Phosphotransferase enzyme family 32 262 2.3E-22 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase AMIS_60530 3c5b3de9fc7065f67c5b3400377c300a 310 Gene3D G3DSA:3.90.1200.10 124 263 1.5E-11 T 14-10-2018 AMIS_60530 3c5b3de9fc7065f67c5b3400377c300a 310 SUPERFAMILY SSF56112 11 266 9.33E-34 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMIS_78590 2263b521a068ee892ffe27abe4afe05b 237 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 61 76 - T 14-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 AMIS_78590 2263b521a068ee892ffe27abe4afe05b 237 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 4 233 1.2E-92 T 14-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 AMIS_78590 2263b521a068ee892ffe27abe4afe05b 237 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 1 235 45.139 T 14-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 AMIS_78590 2263b521a068ee892ffe27abe4afe05b 237 Pfam PF01048 Phosphorylase superfamily 15 215 8.1E-42 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AMIS_78590 2263b521a068ee892ffe27abe4afe05b 237 Gene3D G3DSA:3.40.50.1580 2 235 7.5E-73 T 14-10-2018 AMIS_78590 2263b521a068ee892ffe27abe4afe05b 237 SUPERFAMILY SSF53167 2 234 1.2E-83 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 AMIS_56270 8dd35ad384a849c9e9328d8b415ac8e6 427 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 11 426 1.2E-118 T 14-10-2018 IPR002155 Thiolase GO:0016747 AMIS_56270 8dd35ad384a849c9e9328d8b415ac8e6 427 Gene3D G3DSA:3.40.47.10 2 427 6.3E-102 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_56270 8dd35ad384a849c9e9328d8b415ac8e6 427 PIRSF PIRSF000429 4 427 1.1E-104 T 14-10-2018 IPR002155 Thiolase GO:0016747 AMIS_56270 8dd35ad384a849c9e9328d8b415ac8e6 427 Pfam PF02803 Thiolase, C-terminal domain 286 427 2.7E-31 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 AMIS_56270 8dd35ad384a849c9e9328d8b415ac8e6 427 Pfam PF00108 Thiolase, N-terminal domain 9 277 4.8E-47 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 AMIS_56270 8dd35ad384a849c9e9328d8b415ac8e6 427 SUPERFAMILY SSF53901 287 427 1.54E-29 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_56270 8dd35ad384a849c9e9328d8b415ac8e6 427 SUPERFAMILY SSF53901 9 284 1.13E-55 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_40200 2b0dbc202e8fa20018d61535e87a5f10 834 Pfam PF07676 WD40-like Beta Propeller Repeat 695 708 0.09 T 14-10-2018 IPR011659 WD40-like Beta Propeller AMIS_40200 2b0dbc202e8fa20018d61535e87a5f10 834 Pfam PF07676 WD40-like Beta Propeller Repeat 776 800 5.8E-4 T 14-10-2018 IPR011659 WD40-like Beta Propeller AMIS_40200 2b0dbc202e8fa20018d61535e87a5f10 834 Pfam PF07676 WD40-like Beta Propeller Repeat 654 676 0.029 T 14-10-2018 IPR011659 WD40-like Beta Propeller AMIS_40200 2b0dbc202e8fa20018d61535e87a5f10 834 Pfam PF07676 WD40-like Beta Propeller Repeat 738 765 3.9E-5 T 14-10-2018 IPR011659 WD40-like Beta Propeller AMIS_40200 2b0dbc202e8fa20018d61535e87a5f10 834 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 302 316 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AMIS_40200 2b0dbc202e8fa20018d61535e87a5f10 834 Gene3D G3DSA:2.120.10.60 760 833 5.3E-9 T 14-10-2018 AMIS_40200 2b0dbc202e8fa20018d61535e87a5f10 834 SUPERFAMILY SSF82171 574 821 3.53E-33 T 14-10-2018 AMIS_40200 2b0dbc202e8fa20018d61535e87a5f10 834 Pfam PF00012 Hsp70 protein 85 344 4.0E-37 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMIS_40200 2b0dbc202e8fa20018d61535e87a5f10 834 Pfam PF00012 Hsp70 protein 7 77 7.2E-5 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMIS_40200 2b0dbc202e8fa20018d61535e87a5f10 834 SUPERFAMILY SSF53067 7 154 4.32E-29 T 14-10-2018 AMIS_40200 2b0dbc202e8fa20018d61535e87a5f10 834 Gene3D G3DSA:3.30.420.40 162 330 8.9E-92 T 14-10-2018 AMIS_40200 2b0dbc202e8fa20018d61535e87a5f10 834 Gene3D G3DSA:2.120.10.30 579 757 2.7E-34 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AMIS_40200 2b0dbc202e8fa20018d61535e87a5f10 834 PRINTS PR00301 70kDa heat shock protein signature 299 315 2.6E-10 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMIS_40200 2b0dbc202e8fa20018d61535e87a5f10 834 PRINTS PR00301 70kDa heat shock protein signature 5 18 2.6E-10 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMIS_40200 2b0dbc202e8fa20018d61535e87a5f10 834 PRINTS PR00301 70kDa heat shock protein signature 330 350 2.6E-10 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMIS_40200 2b0dbc202e8fa20018d61535e87a5f10 834 PRINTS PR00301 70kDa heat shock protein signature 116 136 2.6E-10 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMIS_40200 2b0dbc202e8fa20018d61535e87a5f10 834 PRINTS PR00301 70kDa heat shock protein signature 173 183 2.6E-10 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMIS_40200 2b0dbc202e8fa20018d61535e87a5f10 834 SUPERFAMILY SSF53067 162 344 1.3E-35 T 14-10-2018 AMIS_40200 2b0dbc202e8fa20018d61535e87a5f10 834 Gene3D G3DSA:3.30.420.40 7 341 8.9E-92 T 14-10-2018 AMIS_40200 2b0dbc202e8fa20018d61535e87a5f10 834 Gene3D G3DSA:3.90.640.10 200 280 8.9E-92 T 14-10-2018 AMIS_64410 f75f01eb2c7e405236aefdf97b302b4b 347 Gene3D G3DSA:3.40.50.300 14 346 1.3E-86 T 14-10-2018 AMIS_64410 f75f01eb2c7e405236aefdf97b302b4b 347 Pfam PF00005 ABC transporter 46 197 2.1E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_64410 f75f01eb2c7e405236aefdf97b302b4b 347 ProSitePatterns PS00211 ABC transporters family signature. 170 184 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_64410 f75f01eb2c7e405236aefdf97b302b4b 347 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 248 340 2.7E-20 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMIS_64410 f75f01eb2c7e405236aefdf97b302b4b 347 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 249 318 3.8E-17 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMIS_64410 f75f01eb2c7e405236aefdf97b302b4b 347 SUPERFAMILY SSF52540 30 268 1.66E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_64410 f75f01eb2c7e405236aefdf97b302b4b 347 SMART SM00382 54 247 1.0E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_55780 98f3e26a2429b48759847c8abc0c4f8b 345 Gene3D G3DSA:3.90.180.10 16 328 1.1E-132 T 14-10-2018 AMIS_55780 98f3e26a2429b48759847c8abc0c4f8b 345 Pfam PF00107 Zinc-binding dehydrogenase 155 287 5.5E-23 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMIS_55780 98f3e26a2429b48759847c8abc0c4f8b 345 SUPERFAMILY SSF50129 286 330 3.77E-5 T 14-10-2018 IPR011032 GroES-like superfamily AMIS_55780 98f3e26a2429b48759847c8abc0c4f8b 345 SUPERFAMILY SSF51735 120 297 4.09E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_55780 98f3e26a2429b48759847c8abc0c4f8b 345 Gene3D G3DSA:3.40.50.720 123 300 1.1E-132 T 14-10-2018 AMIS_55780 98f3e26a2429b48759847c8abc0c4f8b 345 SUPERFAMILY SSF50129 2 140 3.37E-38 T 14-10-2018 IPR011032 GroES-like superfamily AMIS_55780 98f3e26a2429b48759847c8abc0c4f8b 345 Pfam PF16884 N-terminal domain of oxidoreductase 2 107 5.3E-38 T 14-10-2018 AMIS_55780 98f3e26a2429b48759847c8abc0c4f8b 345 SMART SM00829 15 329 4.4E-8 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMIS_15560 26cf3e9c8f9798ffae101b9b9ecfe087 582 Gene3D G3DSA:3.40.50.300 335 582 9.4E-78 T 14-10-2018 AMIS_15560 26cf3e9c8f9798ffae101b9b9ecfe087 582 SUPERFAMILY SSF90123 11 323 1.31E-53 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMIS_15560 26cf3e9c8f9798ffae101b9b9ecfe087 582 SMART SM00382 366 552 3.3E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_15560 26cf3e9c8f9798ffae101b9b9ecfe087 582 SUPERFAMILY SSF52540 337 574 2.07E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_15560 26cf3e9c8f9798ffae101b9b9ecfe087 582 ProSitePatterns PS00211 ABC transporters family signature. 478 492 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_15560 26cf3e9c8f9798ffae101b9b9ecfe087 582 Pfam PF00005 ABC transporter 357 506 2.0E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_15560 26cf3e9c8f9798ffae101b9b9ecfe087 582 Gene3D G3DSA:1.20.1560.10 4 323 4.8E-52 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMIS_15560 26cf3e9c8f9798ffae101b9b9ecfe087 582 Pfam PF00664 ABC transporter transmembrane region 31 295 1.8E-32 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AMIS_39620 869d808b2d35ad587b204819cce4cf20 448 SUPERFAMILY SSF51679 1 433 2.88E-129 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_39620 869d808b2d35ad587b204819cce4cf20 448 Gene3D G3DSA:3.20.20.30 1 444 6.2E-157 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_39620 869d808b2d35ad587b204819cce4cf20 448 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 7 427 4.4E-166 T 14-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 AMIS_39620 869d808b2d35ad587b204819cce4cf20 448 PIRSF PIRSF000337 1 441 4.3E-162 T 14-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 AMIS_39620 869d808b2d35ad587b204819cce4cf20 448 Pfam PF00296 Luciferase-like monooxygenase 19 383 8.3E-63 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMIS_16130 1a589b44e055366b7538d36834e6f043 87 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 12 81 8.8E-21 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AMIS_16130 1a589b44e055366b7538d36834e6f043 87 PRINTS PR01651 Protein-export SecG membrane protein signature 46 62 1.1E-9 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AMIS_16130 1a589b44e055366b7538d36834e6f043 87 PRINTS PR01651 Protein-export SecG membrane protein signature 62 84 1.1E-9 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AMIS_16130 1a589b44e055366b7538d36834e6f043 87 PRINTS PR01651 Protein-export SecG membrane protein signature 31 45 1.1E-9 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AMIS_16130 1a589b44e055366b7538d36834e6f043 87 PRINTS PR01651 Protein-export SecG membrane protein signature 11 31 1.1E-9 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AMIS_16130 1a589b44e055366b7538d36834e6f043 87 Pfam PF03840 Preprotein translocase SecG subunit 13 80 7.2E-20 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AMIS_11830 ffdf62cf4f59b74de0fbf6109b326824 457 Gene3D G3DSA:3.30.465.10 346 432 2.7E-21 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AMIS_11830 ffdf62cf4f59b74de0fbf6109b326824 457 Pfam PF00571 CBS domain 217 270 3.3E-5 T 14-10-2018 IPR000644 CBS domain AMIS_11830 ffdf62cf4f59b74de0fbf6109b326824 457 Pfam PF00571 CBS domain 285 338 6.1E-7 T 14-10-2018 IPR000644 CBS domain AMIS_11830 ffdf62cf4f59b74de0fbf6109b326824 457 SUPERFAMILY SSF56176 351 442 1.15E-17 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AMIS_11830 ffdf62cf4f59b74de0fbf6109b326824 457 Gene3D G3DSA:3.10.580.10 195 345 3.9E-56 T 14-10-2018 AMIS_11830 ffdf62cf4f59b74de0fbf6109b326824 457 SUPERFAMILY SSF54631 210 357 2.53E-36 T 14-10-2018 AMIS_11830 ffdf62cf4f59b74de0fbf6109b326824 457 Pfam PF03471 Transporter associated domain 356 431 1.0E-14 T 14-10-2018 IPR005170 Transporter-associated domain AMIS_11830 ffdf62cf4f59b74de0fbf6109b326824 457 SMART SM01091 353 433 2.6E-22 T 14-10-2018 IPR005170 Transporter-associated domain AMIS_11830 ffdf62cf4f59b74de0fbf6109b326824 457 Pfam PF01595 Domain of unknown function DUF21 23 200 6.3E-31 T 14-10-2018 IPR002550 CNNM, transmembrane domain AMIS_11830 ffdf62cf4f59b74de0fbf6109b326824 457 SMART SM00116 290 338 3.0 T 14-10-2018 IPR000644 CBS domain AMIS_11830 ffdf62cf4f59b74de0fbf6109b326824 457 SMART SM00116 224 273 0.0021 T 14-10-2018 IPR000644 CBS domain AMIS_61890 eb94a41a278604f3f28758e06704ae1d 87 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 5 87 1.5E-20 T 14-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 AMIS_61890 eb94a41a278604f3f28758e06704ae1d 87 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 2 86 1.3E-7 T 14-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 AMIS_61890 eb94a41a278604f3f28758e06704ae1d 87 SUPERFAMILY SSF101386 2 87 6.98E-20 T 14-10-2018 AMIS_61890 eb94a41a278604f3f28758e06704ae1d 87 Gene3D G3DSA:1.10.287.1080 1 87 1.8E-20 T 14-10-2018 AMIS_61890 eb94a41a278604f3f28758e06704ae1d 87 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 1 87 16.736 T 14-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 AMIS_48190 3c326e8b28d94e51126b30705efb199a 753 Pfam PF00990 Diguanylate cyclase, GGDEF domain 320 469 2.1E-37 T 14-10-2018 IPR000160 GGDEF domain AMIS_48190 3c326e8b28d94e51126b30705efb199a 753 SMART SM00052 485 734 1.9E-102 T 14-10-2018 IPR001633 EAL domain AMIS_48190 3c326e8b28d94e51126b30705efb199a 753 SUPERFAMILY SSF55073 325 477 1.41E-41 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_48190 3c326e8b28d94e51126b30705efb199a 753 SMART SM00267 309 475 8.4E-49 T 14-10-2018 IPR000160 GGDEF domain AMIS_48190 3c326e8b28d94e51126b30705efb199a 753 SUPERFAMILY SSF141868 491 743 8.37E-80 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_48190 3c326e8b28d94e51126b30705efb199a 753 Pfam PF00563 EAL domain 491 729 1.2E-70 T 14-10-2018 IPR001633 EAL domain AMIS_48190 3c326e8b28d94e51126b30705efb199a 753 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 316 471 4.6E-31 T 14-10-2018 IPR000160 GGDEF domain AMIS_48190 3c326e8b28d94e51126b30705efb199a 753 Gene3D G3DSA:3.30.70.270 314 488 1.2E-49 T 14-10-2018 AMIS_48190 3c326e8b28d94e51126b30705efb199a 753 Gene3D G3DSA:3.20.20.450 489 749 3.8E-93 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_43860 180b6afaf290a8a5f18d2a8e387109f1 933 Gene3D G3DSA:3.40.50.200 204 398 1.8E-6 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AMIS_43860 180b6afaf290a8a5f18d2a8e387109f1 933 Pfam PF01483 Proprotein convertase P-domain 824 926 1.3E-5 T 14-10-2018 IPR002884 P domain GO:0004252|GO:0006508 AMIS_43860 180b6afaf290a8a5f18d2a8e387109f1 933 SUPERFAMILY SSF52743 208 652 6.68E-33 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AMIS_43860 180b6afaf290a8a5f18d2a8e387109f1 933 Gene3D G3DSA:3.40.50.200 584 646 1.9E-17 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AMIS_43860 180b6afaf290a8a5f18d2a8e387109f1 933 SUPERFAMILY SSF49785 823 931 1.64E-6 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_43860 180b6afaf290a8a5f18d2a8e387109f1 933 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 591 601 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site AMIS_43860 180b6afaf290a8a5f18d2a8e387109f1 933 Pfam PF00082 Subtilase family 292 641 9.5E-14 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AMIS_43860 180b6afaf290a8a5f18d2a8e387109f1 933 PRINTS PR00723 Subtilisin serine protease family (S8) signature 590 606 3.2E-5 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMIS_43860 180b6afaf290a8a5f18d2a8e387109f1 933 PRINTS PR00723 Subtilisin serine protease family (S8) signature 221 240 3.2E-5 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMIS_12670 d7ff02bf8273f17ce886a844bfb2a7af 738 Pfam PF01522 Polysaccharide deacetylase 96 216 9.2E-31 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMIS_12670 d7ff02bf8273f17ce886a844bfb2a7af 738 Pfam PF13641 Glycosyltransferase like family 2 378 596 4.7E-39 T 14-10-2018 AMIS_12670 d7ff02bf8273f17ce886a844bfb2a7af 738 SUPERFAMILY SSF88713 90 294 1.24E-50 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AMIS_12670 d7ff02bf8273f17ce886a844bfb2a7af 738 Gene3D G3DSA:3.20.20.370 84 303 4.6E-61 T 14-10-2018 AMIS_12670 d7ff02bf8273f17ce886a844bfb2a7af 738 SUPERFAMILY SSF53448 377 623 7.7E-61 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_12670 d7ff02bf8273f17ce886a844bfb2a7af 738 Gene3D G3DSA:3.90.550.10 372 589 8.7E-50 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_52810 b98bff00c86a71f56f190c6fcc3665e6 462 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 288 297 - T 14-10-2018 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 AMIS_52810 b98bff00c86a71f56f190c6fcc3665e6 462 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 175 426 2.8E-44 T 14-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 AMIS_52810 b98bff00c86a71f56f190c6fcc3665e6 462 SUPERFAMILY SSF51445 162 461 3.23E-73 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_52810 b98bff00c86a71f56f190c6fcc3665e6 462 SMART SM00637 31 128 1.1E-39 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 AMIS_52810 b98bff00c86a71f56f190c6fcc3665e6 462 ProSitePatterns PS00561 CBM2a (carbohydrate-binding type-2) domain signature. 96 109 - T 14-10-2018 IPR018366 Carbohydrate-binding type-2, conserved site GO:0004553|GO:0005975|GO:0030246 AMIS_52810 b98bff00c86a71f56f190c6fcc3665e6 462 Gene3D G3DSA:3.20.20.80 157 462 5.3E-90 T 14-10-2018 AMIS_52810 b98bff00c86a71f56f190c6fcc3665e6 462 Pfam PF00553 Cellulose binding domain 32 128 7.4E-30 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 AMIS_52810 b98bff00c86a71f56f190c6fcc3665e6 462 SUPERFAMILY SSF49384 27 129 6.42E-32 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 AMIS_52810 b98bff00c86a71f56f190c6fcc3665e6 462 Gene3D G3DSA:2.60.40.290 30 133 5.0E-35 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 AMIS_72070 4bb8851acdd6632104e52b4473f20396 498 Gene3D G3DSA:3.30.70.270 348 496 1.5E-31 T 14-10-2018 AMIS_72070 4bb8851acdd6632104e52b4473f20396 498 Gene3D G3DSA:1.25.40.10 8 205 7.4E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_72070 4bb8851acdd6632104e52b4473f20396 498 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 351 458 5.3E-22 T 14-10-2018 IPR000160 GGDEF domain AMIS_72070 4bb8851acdd6632104e52b4473f20396 498 SUPERFAMILY SSF55073 357 491 1.83E-26 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_72070 4bb8851acdd6632104e52b4473f20396 498 SUPERFAMILY SSF48452 15 154 6.17E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_72070 4bb8851acdd6632104e52b4473f20396 498 Pfam PF00990 Diguanylate cyclase, GGDEF domain 353 455 7.9E-25 T 14-10-2018 IPR000160 GGDEF domain AMIS_72070 4bb8851acdd6632104e52b4473f20396 498 SMART SM00267 339 498 3.4E-14 T 14-10-2018 IPR000160 GGDEF domain AMIS_39270 e725e2c4420059b48b63dc0f33ec14cf 322 Gene3D G3DSA:3.90.180.10 23 319 1.7E-93 T 14-10-2018 AMIS_39270 e725e2c4420059b48b63dc0f33ec14cf 322 SMART SM00829 16 319 7.2E-12 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMIS_39270 e725e2c4420059b48b63dc0f33ec14cf 322 Pfam PF13602 Zinc-binding dehydrogenase 200 319 6.9E-14 T 14-10-2018 AMIS_39270 e725e2c4420059b48b63dc0f33ec14cf 322 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 2 322 1.3E-120 T 14-10-2018 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 AMIS_39270 e725e2c4420059b48b63dc0f33ec14cf 322 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 92 2.0E-7 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMIS_39270 e725e2c4420059b48b63dc0f33ec14cf 322 Gene3D G3DSA:3.40.50.720 127 259 1.7E-93 T 14-10-2018 AMIS_39270 e725e2c4420059b48b63dc0f33ec14cf 322 SUPERFAMILY SSF50129 12 142 6.24E-34 T 14-10-2018 IPR011032 GroES-like superfamily AMIS_39270 e725e2c4420059b48b63dc0f33ec14cf 322 SUPERFAMILY SSF51735 116 267 3.49E-31 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_61610 a3ddf79d32b9249d48cef40725ece090 264 SUPERFAMILY SSF53335 13 231 1.44E-34 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_61610 a3ddf79d32b9249d48cef40725ece090 264 Gene3D G3DSA:3.40.50.150 5 215 3.7E-36 T 14-10-2018 AMIS_61610 a3ddf79d32b9249d48cef40725ece090 264 Pfam PF13649 Methyltransferase domain 47 139 9.8E-18 T 14-10-2018 AMIS_31770 a635e679dde0e3b6faf744f1c9c14c14 124 Pfam PF13581 Histidine kinase-like ATPase domain 7 117 7.4E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_31770 a635e679dde0e3b6faf744f1c9c14c14 124 SUPERFAMILY SSF55874 32 118 4.24E-9 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_31770 a635e679dde0e3b6faf744f1c9c14c14 124 Gene3D G3DSA:3.30.565.10 5 123 1.4E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_55100 744fcd39c4852b8b5270339ea778a0b4 367 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 124 5.6E-21 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AMIS_55100 744fcd39c4852b8b5270339ea778a0b4 367 Gene3D G3DSA:3.40.50.720 2 134 1.5E-32 T 14-10-2018 AMIS_55100 744fcd39c4852b8b5270339ea778a0b4 367 Gene3D G3DSA:3.30.360.10 135 277 4.3E-11 T 14-10-2018 AMIS_55100 744fcd39c4852b8b5270339ea778a0b4 367 SUPERFAMILY SSF51735 3 145 2.31E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_55100 744fcd39c4852b8b5270339ea778a0b4 367 SUPERFAMILY SSF55347 145 280 5.01E-6 T 14-10-2018 AMIS_68390 2badd9816db8435d540d696ef290a941 429 Pfam PF13360 PQQ-like domain 178 316 2.6E-8 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat AMIS_68390 2badd9816db8435d540d696ef290a941 429 SUPERFAMILY SSF50998 134 353 1.14E-13 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AMIS_68390 2badd9816db8435d540d696ef290a941 429 Gene3D G3DSA:2.130.10.10 131 384 6.7E-18 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_22080 20a8a9acbe5db3f28af65d99043f735f 526 Gene3D G3DSA:1.20.1560.10 3 297 3.9E-42 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMIS_22080 20a8a9acbe5db3f28af65d99043f735f 526 Pfam PF00005 ABC transporter 363 451 1.7E-7 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_22080 20a8a9acbe5db3f28af65d99043f735f 526 Pfam PF00664 ABC transporter transmembrane region 9 263 1.0E-18 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AMIS_22080 20a8a9acbe5db3f28af65d99043f735f 526 Gene3D G3DSA:3.40.50.300 315 522 4.6E-34 T 14-10-2018 AMIS_22080 20a8a9acbe5db3f28af65d99043f735f 526 SUPERFAMILY SSF52540 337 519 1.49E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_22080 20a8a9acbe5db3f28af65d99043f735f 526 SUPERFAMILY SSF90123 6 297 1.31E-44 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMIS_22080 20a8a9acbe5db3f28af65d99043f735f 526 ProSitePatterns PS00211 ABC transporters family signature. 423 437 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_69050 f3f0066a7c493b512ff5f16c71bf8db2 247 Gene3D G3DSA:3.40.50.300 4 247 4.0E-77 T 14-10-2018 AMIS_69050 f3f0066a7c493b512ff5f16c71bf8db2 247 SMART SM00382 31 225 1.4E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_69050 f3f0066a7c493b512ff5f16c71bf8db2 247 Pfam PF00005 ABC transporter 22 170 4.1E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_69050 f3f0066a7c493b512ff5f16c71bf8db2 247 PIRSF PIRSF039085 3 246 1.8E-110 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AMIS_69050 f3f0066a7c493b512ff5f16c71bf8db2 247 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_69050 f3f0066a7c493b512ff5f16c71bf8db2 247 SUPERFAMILY SSF52540 6 240 3.39E-79 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_2780 c2ead443bc83d7555b13330bd3a000ae 140 Pfam PF01381 Helix-turn-helix 32 71 1.6E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMIS_2780 c2ead443bc83d7555b13330bd3a000ae 140 SUPERFAMILY SSF47413 11 75 1.4E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_2780 c2ead443bc83d7555b13330bd3a000ae 140 Gene3D G3DSA:1.10.260.40 10 76 5.9E-8 T 14-10-2018 AMIS_29220 ae033abdacd2961baff3af10f8d1b207 341 Gene3D G3DSA:3.40.50.1980 165 340 1.6E-41 T 14-10-2018 AMIS_29220 ae033abdacd2961baff3af10f8d1b207 341 SUPERFAMILY SSF53807 49 339 5.89E-42 T 14-10-2018 AMIS_29220 ae033abdacd2961baff3af10f8d1b207 341 Pfam PF01497 Periplasmic binding protein 61 314 2.9E-20 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain AMIS_29220 ae033abdacd2961baff3af10f8d1b207 341 Gene3D G3DSA:3.40.50.1980 30 153 2.5E-20 T 14-10-2018 AMIS_43620 5aa8fa9170839eb266032a261fff15f3 571 Gene3D G3DSA:3.20.20.80 251 571 2.1E-87 T 14-10-2018 AMIS_43620 5aa8fa9170839eb266032a261fff15f3 571 SUPERFAMILY SSF51445 255 570 5.38E-84 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_43620 5aa8fa9170839eb266032a261fff15f3 571 SMART SM00633 296 569 4.2E-55 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 AMIS_43620 5aa8fa9170839eb266032a261fff15f3 571 Pfam PF00331 Glycosyl hydrolase family 10 256 566 1.2E-75 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 AMIS_43620 5aa8fa9170839eb266032a261fff15f3 571 PRINTS PR00134 Glycosyl hydrolase family 10 signature 369 380 1.4E-10 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 AMIS_43620 5aa8fa9170839eb266032a261fff15f3 571 PRINTS PR00134 Glycosyl hydrolase family 10 signature 421 432 1.4E-10 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 AMIS_43620 5aa8fa9170839eb266032a261fff15f3 571 PRINTS PR00134 Glycosyl hydrolase family 10 signature 450 462 1.4E-10 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 AMIS_43620 5aa8fa9170839eb266032a261fff15f3 571 PRINTS PR00134 Glycosyl hydrolase family 10 signature 327 339 1.4E-10 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 AMIS_41440 3cb72052f3a86fcb7f2708db2c7067e8 356 SUPERFAMILY SSF55874 252 351 3.58E-8 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_41440 3cb72052f3a86fcb7f2708db2c7067e8 356 Gene3D G3DSA:3.30.565.10 240 352 1.8E-23 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_41440 3cb72052f3a86fcb7f2708db2c7067e8 356 Pfam PF07730 Histidine kinase 170 234 1.6E-12 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMIS_73910 3cde3fb350b990e049965f928a1f0a74 249 SMART SM00345 12 71 2.0E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_73910 3cde3fb350b990e049965f928a1f0a74 249 SUPERFAMILY SSF64288 59 247 2.04E-29 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AMIS_73910 3cde3fb350b990e049965f928a1f0a74 249 Gene3D G3DSA:1.10.10.10 4 73 1.6E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_73910 3cde3fb350b990e049965f928a1f0a74 249 SUPERFAMILY SSF46785 5 79 1.57E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_73910 3cde3fb350b990e049965f928a1f0a74 249 Pfam PF07702 UTRA domain 102 239 1.8E-23 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AMIS_73910 3cde3fb350b990e049965f928a1f0a74 249 SMART SM00866 100 242 4.6E-18 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AMIS_73910 3cde3fb350b990e049965f928a1f0a74 249 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 71 6.8E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_73910 3cde3fb350b990e049965f928a1f0a74 249 Gene3D G3DSA:3.40.1410.10 76 245 9.5E-41 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AMIS_51100 83ab8ba04d46e7c6e97cc43b14008e46 251 Gene3D G3DSA:2.40.30.130 1 80 2.4E-15 T 14-10-2018 AMIS_51100 83ab8ba04d46e7c6e97cc43b14008e46 251 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 203 245 1.2E-8 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 AMIS_51100 83ab8ba04d46e7c6e97cc43b14008e46 251 Gene3D G3DSA:3.30.980.10 97 251 1.2E-28 T 14-10-2018 AMIS_51100 83ab8ba04d46e7c6e97cc43b14008e46 251 SMART SM00863 203 246 4.9E-11 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 AMIS_51100 83ab8ba04d46e7c6e97cc43b14008e46 251 Pfam PF01411 tRNA synthetases class II (A) 28 69 3.5E-7 T 14-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 AMIS_51100 83ab8ba04d46e7c6e97cc43b14008e46 251 SUPERFAMILY SSF50447 1 89 3.46E-11 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AMIS_51100 83ab8ba04d46e7c6e97cc43b14008e46 251 SUPERFAMILY SSF55186 100 248 2.62E-28 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 AMIS_72620 6a7fdcbebbe4fbd78459391dfe1e52a7 404 TIGRFAM TIGR01885 Orn_aminotrans: ornithine--oxo-acid transaminase 11 402 3.2E-147 T 14-10-2018 IPR010164 Ornithine aminotransferase GO:0004587 KEGG: 00330+2.6.1.13|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AMIS_72620 6a7fdcbebbe4fbd78459391dfe1e52a7 404 SUPERFAMILY SSF53383 8 403 5.15E-120 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_72620 6a7fdcbebbe4fbd78459391dfe1e52a7 404 Gene3D G3DSA:3.90.1150.10 17 394 8.0E-137 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMIS_72620 6a7fdcbebbe4fbd78459391dfe1e52a7 404 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 227 264 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMIS_72620 6a7fdcbebbe4fbd78459391dfe1e52a7 404 PIRSF PIRSF000521 6 163 5.8E-8 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMIS_72620 6a7fdcbebbe4fbd78459391dfe1e52a7 404 PIRSF PIRSF000521 179 404 2.3E-29 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMIS_72620 6a7fdcbebbe4fbd78459391dfe1e52a7 404 Gene3D G3DSA:3.40.640.10 62 312 8.0E-137 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_72620 6a7fdcbebbe4fbd78459391dfe1e52a7 404 Pfam PF00202 Aminotransferase class-III 20 402 1.3E-115 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMIS_3400 49829618995e4705d5a54aea04032081 583 SUPERFAMILY SSF56300 85 318 4.98E-18 T 14-10-2018 AMIS_3400 49829618995e4705d5a54aea04032081 583 Pfam PF00149 Calcineurin-like phosphoesterase 90 295 1.4E-4 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AMIS_47980 5d8dff510cd505973b59c5f3ba81a007 315 SUPERFAMILY SSF46689 209 260 9.22E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_47980 5d8dff510cd505973b59c5f3ba81a007 315 SMART SM00342 226 309 1.3E-27 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMIS_47980 5d8dff510cd505973b59c5f3ba81a007 315 Pfam PF12833 Helix-turn-helix domain 232 310 5.4E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMIS_47980 5d8dff510cd505973b59c5f3ba81a007 315 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 263 305 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AMIS_47980 5d8dff510cd505973b59c5f3ba81a007 315 Pfam PF12852 Cupin 2 194 5.5E-46 T 14-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain AMIS_47980 5d8dff510cd505973b59c5f3ba81a007 315 Gene3D G3DSA:1.10.10.60 209 313 3.2E-24 T 14-10-2018 AMIS_47980 5d8dff510cd505973b59c5f3ba81a007 315 SUPERFAMILY SSF46689 262 311 1.87E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_72320 f2a98976795f25fc5de165199bbefcac 532 SUPERFAMILY SSF56112 8 274 1.09E-67 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMIS_72320 f2a98976795f25fc5de165199bbefcac 532 SMART SM00220 11 267 2.1E-54 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMIS_72320 f2a98976795f25fc5de165199bbefcac 532 Gene3D G3DSA:1.10.510.10 100 278 1.6E-42 T 14-10-2018 AMIS_72320 f2a98976795f25fc5de165199bbefcac 532 Pfam PF00069 Protein kinase domain 11 264 1.1E-45 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMIS_72320 f2a98976795f25fc5de165199bbefcac 532 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 17 40 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 AMIS_72320 f2a98976795f25fc5de165199bbefcac 532 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 136 148 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 AMIS_72320 f2a98976795f25fc5de165199bbefcac 532 Gene3D G3DSA:3.30.200.20 1 97 2.4E-30 T 14-10-2018 AMIS_32900 395132b838f10aff36249e62d5371406 522 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 3.3E-5 T 14-10-2018 AMIS_32900 395132b838f10aff36249e62d5371406 522 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 322 3.3E-5 T 14-10-2018 AMIS_32900 395132b838f10aff36249e62d5371406 522 Gene3D G3DSA:3.50.50.60 205 311 7.7E-9 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_32900 395132b838f10aff36249e62d5371406 522 Pfam PF05199 GMC oxidoreductase 454 512 1.7E-18 T 14-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 AMIS_32900 395132b838f10aff36249e62d5371406 522 SUPERFAMILY SSF51905 1 520 1.12E-61 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_32900 395132b838f10aff36249e62d5371406 522 Pfam PF00732 GMC oxidoreductase 5 285 1.7E-14 T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AMIS_32900 395132b838f10aff36249e62d5371406 522 Gene3D G3DSA:3.50.50.60 1 139 3.4E-16 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_32900 395132b838f10aff36249e62d5371406 522 Gene3D G3DSA:3.50.50.60 428 521 4.9E-14 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_56800 147a557561c5d2085a6b094e4d558f13 415 Pfam PF05977 Transmembrane secretion effector 7 387 1.1E-24 T 14-10-2018 IPR010290 Transmembrane secretion effector AMIS_56800 147a557561c5d2085a6b094e4d558f13 415 SUPERFAMILY SSF103473 7 390 7.72E-40 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_56800 147a557561c5d2085a6b094e4d558f13 415 Gene3D G3DSA:1.20.1250.20 4 391 1.3E-34 T 14-10-2018 AMIS_4630 9791306f05145000582828f48224d8f2 295 Pfam PF04542 Sigma-70 region 2 75 143 4.3E-19 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_4630 9791306f05145000582828f48224d8f2 295 Pfam PF04539 Sigma-70 region 3 154 225 3.6E-15 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 AMIS_4630 9791306f05145000582828f48224d8f2 295 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 70 290 3.6E-36 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_4630 9791306f05145000582828f48224d8f2 295 Pfam PF04545 Sigma-70, region 4 239 287 2.4E-17 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 AMIS_4630 9791306f05145000582828f48224d8f2 295 SUPERFAMILY SSF88659 147 221 4.8E-15 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_4630 9791306f05145000582828f48224d8f2 295 Gene3D G3DSA:1.20.120.1810 20 142 1.2E-20 T 14-10-2018 AMIS_4630 9791306f05145000582828f48224d8f2 295 Gene3D G3DSA:1.10.10.10 221 293 4.5E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_4630 9791306f05145000582828f48224d8f2 295 Gene3D G3DSA:1.10.10.10 144 197 1.4E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_4630 9791306f05145000582828f48224d8f2 295 SUPERFAMILY SSF88946 62 143 6.41E-29 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_4630 9791306f05145000582828f48224d8f2 295 PRINTS PR00046 Major sigma-70 factor signature 98 111 2.0E-11 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMIS_4630 9791306f05145000582828f48224d8f2 295 PRINTS PR00046 Major sigma-70 factor signature 243 255 2.0E-11 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMIS_4630 9791306f05145000582828f48224d8f2 295 PRINTS PR00046 Major sigma-70 factor signature 260 275 2.0E-11 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMIS_4630 9791306f05145000582828f48224d8f2 295 PRINTS PR00046 Major sigma-70 factor signature 275 286 2.0E-11 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMIS_4630 9791306f05145000582828f48224d8f2 295 SUPERFAMILY SSF88659 207 291 2.99E-18 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_4630 9791306f05145000582828f48224d8f2 295 TIGRFAM TIGR02980 SigBFG: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 69 290 1.4E-86 T 14-10-2018 IPR014322 RNA polymerase sigma-B/F/G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_56410 bac943481c178a4a4ad182abc9d62683 833 SUPERFAMILY SSF49899 613 732 6.65E-6 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily AMIS_56410 bac943481c178a4a4ad182abc9d62683 833 Pfam PF06964 Alpha-L-arabinofuranosidase C-terminal domain 472 824 3.0E-39 T 14-10-2018 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 AMIS_56410 bac943481c178a4a4ad182abc9d62683 833 Gene3D G3DSA:2.60.120.260 71 217 6.2E-12 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_56410 bac943481c178a4a4ad182abc9d62683 833 Gene3D G3DSA:2.60.120.560 595 755 1.2E-14 T 14-10-2018 AMIS_56410 bac943481c178a4a4ad182abc9d62683 833 Gene3D G3DSA:3.20.20.80 218 545 1.4E-84 T 14-10-2018 AMIS_56410 bac943481c178a4a4ad182abc9d62683 833 SMART SM00813 472 824 3.6E-44 T 14-10-2018 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 AMIS_56410 bac943481c178a4a4ad182abc9d62683 833 SUPERFAMILY SSF49785 72 220 1.68E-10 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_56410 bac943481c178a4a4ad182abc9d62683 833 Pfam PF02018 Carbohydrate binding domain 72 207 1.0E-11 T 14-10-2018 IPR003305 Carbohydrate-binding, CenC-like GO:0016798 AMIS_56410 bac943481c178a4a4ad182abc9d62683 833 SUPERFAMILY SSF51445 205 550 1.4E-65 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_47460 da6e8e90d43b4970796cb7e245d7af14 364 Pfam PF12006 Protein of unknown function (DUF3500) 56 360 2.1E-93 T 14-10-2018 IPR021889 Protein of unknown function DUF3500 AMIS_58560 463d77e5c03f9c459d06e51aa8afb605 1078 SMART SM00862 24 97 1.6E-9 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_58560 463d77e5c03f9c459d06e51aa8afb605 1078 Pfam PF03704 Bacterial transcriptional activator domain 104 247 1.3E-32 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain AMIS_58560 463d77e5c03f9c459d06e51aa8afb605 1078 PRINTS PR00364 Disease resistance protein signature 472 486 1.0E-6 T 14-10-2018 AMIS_58560 463d77e5c03f9c459d06e51aa8afb605 1078 PRINTS PR00364 Disease resistance protein signature 366 380 1.0E-6 T 14-10-2018 AMIS_58560 463d77e5c03f9c459d06e51aa8afb605 1078 PRINTS PR00364 Disease resistance protein signature 287 302 1.0E-6 T 14-10-2018 AMIS_58560 463d77e5c03f9c459d06e51aa8afb605 1078 Gene3D G3DSA:1.25.40.10 102 268 9.0E-40 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_58560 463d77e5c03f9c459d06e51aa8afb605 1078 Gene3D G3DSA:1.10.10.10 4 100 8.9E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_58560 463d77e5c03f9c459d06e51aa8afb605 1078 SMART SM01043 104 247 2.4E-36 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain AMIS_58560 463d77e5c03f9c459d06e51aa8afb605 1078 Gene3D G3DSA:1.25.40.10 746 1055 5.1E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_58560 463d77e5c03f9c459d06e51aa8afb605 1078 SUPERFAMILY SSF48452 100 266 1.59E-27 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_58560 463d77e5c03f9c459d06e51aa8afb605 1078 Pfam PF00486 Transcriptional regulatory protein, C terminal 35 96 1.3E-5 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_58560 463d77e5c03f9c459d06e51aa8afb605 1078 SUPERFAMILY SSF46894 11 97 7.09E-11 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_58560 463d77e5c03f9c459d06e51aa8afb605 1078 SUPERFAMILY SSF52540 257 535 2.1E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_51480 b4ba03c829a1139f92a55980d44fa762 309 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 42 305 8.1E-53 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 AMIS_51480 b4ba03c829a1139f92a55980d44fa762 309 Gene3D G3DSA:3.40.190.10 44 308 1.0E-81 T 14-10-2018 AMIS_51480 b4ba03c829a1139f92a55980d44fa762 309 SUPERFAMILY SSF53850 42 308 4.61E-52 T 14-10-2018 AMIS_51480 b4ba03c829a1139f92a55980d44fa762 309 Gene3D G3DSA:3.40.190.120 144 249 1.0E-81 T 14-10-2018 AMIS_31580 e33c73b0b7134869fdb5c6ada55d202b 365 Gene3D G3DSA:3.40.50.2000 1 361 3.2E-78 T 14-10-2018 AMIS_31580 e33c73b0b7134869fdb5c6ada55d202b 365 Gene3D G3DSA:3.40.50.2000 199 350 3.2E-78 T 14-10-2018 AMIS_31580 e33c73b0b7134869fdb5c6ada55d202b 365 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 254 334 1.7E-9 T 14-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 AMIS_31580 e33c73b0b7134869fdb5c6ada55d202b 365 SUPERFAMILY SSF53756 1 361 7.96E-59 T 14-10-2018 AMIS_25250 1b4fac096356a88181ae2c5ad4249ad5 261 SUPERFAMILY SSF56655 7 258 3.27E-61 T 14-10-2018 AMIS_25250 1b4fac096356a88181ae2c5ad4249ad5 261 PRINTS PR00377 Inositol monophosphatase superfamily signature 66 82 3.8E-30 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMIS_25250 1b4fac096356a88181ae2c5ad4249ad5 261 PRINTS PR00377 Inositol monophosphatase superfamily signature 180 201 3.8E-30 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMIS_25250 1b4fac096356a88181ae2c5ad4249ad5 261 PRINTS PR00377 Inositol monophosphatase superfamily signature 86 102 3.8E-30 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMIS_25250 1b4fac096356a88181ae2c5ad4249ad5 261 PRINTS PR00377 Inositol monophosphatase superfamily signature 135 158 3.8E-30 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMIS_25250 1b4fac096356a88181ae2c5ad4249ad5 261 PRINTS PR00377 Inositol monophosphatase superfamily signature 211 235 3.8E-30 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMIS_25250 1b4fac096356a88181ae2c5ad4249ad5 261 PRINTS PR00377 Inositol monophosphatase superfamily signature 44 64 3.8E-30 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMIS_25250 1b4fac096356a88181ae2c5ad4249ad5 261 Pfam PF00459 Inositol monophosphatase family 16 241 6.2E-46 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMIS_25250 1b4fac096356a88181ae2c5ad4249ad5 261 Gene3D G3DSA:3.40.190.80 147 260 5.9E-21 T 14-10-2018 AMIS_25250 1b4fac096356a88181ae2c5ad4249ad5 261 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 86 99 - T 14-10-2018 IPR020583 Inositol monophosphatase, metal-binding site AMIS_25250 1b4fac096356a88181ae2c5ad4249ad5 261 Gene3D G3DSA:3.30.540.10 2 144 1.5E-36 T 14-10-2018 AMIS_37030 5754af658d3b1f1914d076e60b018262 544 SMART SM00283 289 543 1.9E-46 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_37030 5754af658d3b1f1914d076e60b018262 544 Pfam PF00672 HAMP domain 231 276 7.8E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_37030 5754af658d3b1f1914d076e60b018262 544 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 349 513 9.4E-32 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_37030 5754af658d3b1f1914d076e60b018262 544 SMART SM00304 229 281 9.5E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_37030 5754af658d3b1f1914d076e60b018262 544 Gene3D G3DSA:1.10.287.950 229 544 7.6E-62 T 14-10-2018 AMIS_37030 5754af658d3b1f1914d076e60b018262 544 SUPERFAMILY SSF58104 249 542 1.11E-61 T 14-10-2018 AMIS_40410 22dcb91023ad4925cf1b864cd310cf9e 253 PIRSF PIRSF036979 23 227 5.2E-10 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 AMIS_40410 22dcb91023ad4925cf1b864cd310cf9e 253 Gene3D G3DSA:3.40.800.10 6 252 7.3E-40 T 14-10-2018 AMIS_40410 22dcb91023ad4925cf1b864cd310cf9e 253 SUPERFAMILY SSF52768 25 226 9.18E-34 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily AMIS_40410 22dcb91023ad4925cf1b864cd310cf9e 253 PRINTS PR00116 Arginase signature 65 80 3.5E-8 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 AMIS_40410 22dcb91023ad4925cf1b864cd310cf9e 253 PRINTS PR00116 Arginase signature 88 115 3.5E-8 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 AMIS_40410 22dcb91023ad4925cf1b864cd310cf9e 253 PRINTS PR00116 Arginase signature 212 226 3.5E-8 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 AMIS_40410 22dcb91023ad4925cf1b864cd310cf9e 253 Pfam PF00491 Arginase family 39 226 3.6E-23 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 AMIS_66220 8b24fc4eaf64e8d428b7b77f3751c0d7 330 SUPERFAMILY SSF52540 9 226 2.24E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_66220 8b24fc4eaf64e8d428b7b77f3751c0d7 330 SMART SM00382 34 212 1.1E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_66220 8b24fc4eaf64e8d428b7b77f3751c0d7 330 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_66220 8b24fc4eaf64e8d428b7b77f3751c0d7 330 Gene3D G3DSA:3.40.50.300 5 232 6.3E-57 T 14-10-2018 AMIS_66220 8b24fc4eaf64e8d428b7b77f3751c0d7 330 Pfam PF00005 ABC transporter 27 164 4.4E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_27820 ee0eba854ed7628fe43d239973f7f9ea 50 SUPERFAMILY SSF47413 9 50 2.57E-10 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_27820 ee0eba854ed7628fe43d239973f7f9ea 50 Gene3D G3DSA:1.10.260.40 6 50 6.5E-11 T 14-10-2018 AMIS_27820 ee0eba854ed7628fe43d239973f7f9ea 50 Pfam PF13560 Helix-turn-helix domain 10 48 6.9E-10 T 14-10-2018 AMIS_39450 38c5c7eaf2134f7037cd49f3119671cc 219 SUPERFAMILY SSF46689 6 69 6.67E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_39450 38c5c7eaf2134f7037cd49f3119671cc 219 Gene3D G3DSA:1.10.10.60 1 72 6.4E-26 T 14-10-2018 AMIS_39450 38c5c7eaf2134f7037cd49f3119671cc 219 Gene3D G3DSA:1.10.357.10 73 219 2.0E-34 T 14-10-2018 AMIS_39450 38c5c7eaf2134f7037cd49f3119671cc 219 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 84 216 2.9E-6 T 14-10-2018 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 AMIS_39450 38c5c7eaf2134f7037cd49f3119671cc 219 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 5.4E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_39450 38c5c7eaf2134f7037cd49f3119671cc 219 SUPERFAMILY SSF48498 80 216 1.45E-18 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_46880 c2c73356f229eda4dec73417ea93fe1e 237 Gene3D G3DSA:1.10.10.60 7 80 2.7E-25 T 14-10-2018 AMIS_46880 c2c73356f229eda4dec73417ea93fe1e 237 Gene3D G3DSA:1.10.357.10 81 236 4.6E-45 T 14-10-2018 AMIS_46880 c2c73356f229eda4dec73417ea93fe1e 237 SUPERFAMILY SSF48498 91 236 2.45E-33 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_46880 c2c73356f229eda4dec73417ea93fe1e 237 Pfam PF00440 Bacterial regulatory proteins, tetR family 32 72 3.6E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_46880 c2c73356f229eda4dec73417ea93fe1e 237 SUPERFAMILY SSF46689 19 84 9.98E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_46880 c2c73356f229eda4dec73417ea93fe1e 237 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 87 234 1.7E-30 T 14-10-2018 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 AMIS_64140 ca9573011af4589a73fdbb5006fc1f5c 404 Gene3D G3DSA:3.90.550.10 3 248 1.4E-25 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_64140 ca9573011af4589a73fdbb5006fc1f5c 404 SUPERFAMILY SSF53448 15 202 2.45E-20 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_64140 ca9573011af4589a73fdbb5006fc1f5c 404 Pfam PF00535 Glycosyl transferase family 2 41 129 2.1E-8 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AMIS_52650 24a8da9f7e1339081f1d10ff21daa8ea 128 Pfam PF01042 Endoribonuclease L-PSP 13 125 9.3E-26 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 AMIS_52650 24a8da9f7e1339081f1d10ff21daa8ea 128 Gene3D G3DSA:3.30.1330.40 5 127 1.9E-34 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AMIS_52650 24a8da9f7e1339081f1d10ff21daa8ea 128 SUPERFAMILY SSF55298 10 126 2.98E-31 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AMIS_71320 1775f24bf6025428842041a4b250188e 368 SUPERFAMILY SSF50952 40 357 1.7E-40 T 14-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 AMIS_71320 1775f24bf6025428842041a4b250188e 368 Gene3D G3DSA:2.120.10.30 21 360 3.6E-98 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AMIS_71320 1775f24bf6025428842041a4b250188e 368 Pfam PF07995 Glucose / Sorbosone dehydrogenase 49 343 3.6E-55 T 14-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase AMIS_74960 387dab5a4c0ef03a1febbf4c9b2297c0 432 SUPERFAMILY SSF52540 18 224 1.33E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_74960 387dab5a4c0ef03a1febbf4c9b2297c0 432 SUPERFAMILY SSF50447 234 322 1.12E-20 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AMIS_74960 387dab5a4c0ef03a1febbf4c9b2297c0 432 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 24 203 3.6E-12 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AMIS_74960 387dab5a4c0ef03a1febbf4c9b2297c0 432 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 10 432 46.505 T 14-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AMIS_74960 387dab5a4c0ef03a1febbf4c9b2297c0 432 Pfam PF00009 Elongation factor Tu GTP binding domain 19 202 2.2E-41 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_74960 387dab5a4c0ef03a1febbf4c9b2297c0 432 SUPERFAMILY SSF50465 325 429 5.76E-31 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AMIS_74960 387dab5a4c0ef03a1febbf4c9b2297c0 432 Gene3D G3DSA:3.40.50.300 9 228 8.0E-66 T 14-10-2018 AMIS_74960 387dab5a4c0ef03a1febbf4c9b2297c0 432 Gene3D G3DSA:2.40.30.10 323 430 8.6E-35 T 14-10-2018 AMIS_74960 387dab5a4c0ef03a1febbf4c9b2297c0 432 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 19 428 6.6E-171 T 14-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AMIS_74960 387dab5a4c0ef03a1febbf4c9b2297c0 432 Gene3D G3DSA:2.40.30.10 229 322 5.5E-26 T 14-10-2018 AMIS_74960 387dab5a4c0ef03a1febbf4c9b2297c0 432 PRINTS PR00315 GTP-binding elongation factor signature 99 109 2.9E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_74960 387dab5a4c0ef03a1febbf4c9b2297c0 432 PRINTS PR00315 GTP-binding elongation factor signature 79 87 2.9E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_74960 387dab5a4c0ef03a1febbf4c9b2297c0 432 PRINTS PR00315 GTP-binding elongation factor signature 115 126 2.9E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_74960 387dab5a4c0ef03a1febbf4c9b2297c0 432 PRINTS PR00315 GTP-binding elongation factor signature 152 161 2.9E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_74960 387dab5a4c0ef03a1febbf4c9b2297c0 432 PRINTS PR00315 GTP-binding elongation factor signature 20 33 2.9E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_74960 387dab5a4c0ef03a1febbf4c9b2297c0 432 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 72 87 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site AMIS_34900 ed89a2ca4c4015387e4d37fae855922c 296 Gene3D G3DSA:3.50.50.60 3 292 1.2E-65 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_34900 ed89a2ca4c4015387e4d37fae855922c 296 Pfam PF01593 Flavin containing amine oxidoreductase 98 295 1.4E-5 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 AMIS_34900 ed89a2ca4c4015387e4d37fae855922c 296 Pfam PF13450 NAD(P)-binding Rossmann-like domain 5 58 9.4E-13 T 14-10-2018 AMIS_34900 ed89a2ca4c4015387e4d37fae855922c 296 Gene3D G3DSA:3.90.660.10 41 260 1.2E-65 T 14-10-2018 AMIS_34900 ed89a2ca4c4015387e4d37fae855922c 296 SUPERFAMILY SSF51905 1 295 6.91E-32 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_34900 ed89a2ca4c4015387e4d37fae855922c 296 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 265 280 4.1E-6 T 14-10-2018 AMIS_34900 ed89a2ca4c4015387e4d37fae855922c 296 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 4.1E-6 T 14-10-2018 AMIS_5030 23022db1d0ee4adabb55e6dfe34a75fe 179 SUPERFAMILY SSF46689 9 64 7.48E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_5030 23022db1d0ee4adabb55e6dfe34a75fe 179 Gene3D G3DSA:1.10.357.10 2 178 1.8E-22 T 14-10-2018 AMIS_5030 23022db1d0ee4adabb55e6dfe34a75fe 179 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 59 4.9E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_72260 baad6d98e6ce74386511aa554538a73d 349 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 50 63 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 AMIS_72260 baad6d98e6ce74386511aa554538a73d 349 Gene3D G3DSA:3.40.50.1100 9 322 6.2E-124 T 14-10-2018 AMIS_72260 baad6d98e6ce74386511aa554538a73d 349 TIGRFAM TIGR00260 thrC: threonine synthase 6 323 2.1E-95 T 14-10-2018 IPR004450 Threonine synthase-like AMIS_72260 baad6d98e6ce74386511aa554538a73d 349 SUPERFAMILY SSF53686 3 332 2.1E-104 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMIS_72260 baad6d98e6ce74386511aa554538a73d 349 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 22 316 1.0E-70 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AMIS_72260 baad6d98e6ce74386511aa554538a73d 349 PIRSF PIRSF038945 1 347 5.2E-161 T 14-10-2018 IPR026260 Threonine synthase, bacterial/archaeal GO:0004795|GO:0009088 KEGG: 00260+4.2.3.1|KEGG: 00750+4.2.3.1 AMIS_72260 baad6d98e6ce74386511aa554538a73d 349 Gene3D G3DSA:3.40.50.1100 58 154 6.2E-124 T 14-10-2018 AMIS_60640 5c3d5f99593bd082587c155a32531a40 254 SUPERFAMILY SSF56112 24 183 7.14E-16 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMIS_53890 439ad0dd469e799e9cdb7f5fb4bf800a 229 SUPERFAMILY SSF46894 144 213 2.38E-22 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_53890 439ad0dd469e799e9cdb7f5fb4bf800a 229 SUPERFAMILY SSF52172 2 133 5.69E-31 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_53890 439ad0dd469e799e9cdb7f5fb4bf800a 229 Gene3D G3DSA:3.40.50.12740 3 213 6.3E-68 T 14-10-2018 AMIS_53890 439ad0dd469e799e9cdb7f5fb4bf800a 229 SMART SM00448 3 116 1.2E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_53890 439ad0dd469e799e9cdb7f5fb4bf800a 229 Pfam PF00072 Response regulator receiver domain 5 117 4.7E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_53890 439ad0dd469e799e9cdb7f5fb4bf800a 229 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 207 4.7E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_53890 439ad0dd469e799e9cdb7f5fb4bf800a 229 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 1.7E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_53890 439ad0dd469e799e9cdb7f5fb4bf800a 229 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 1.7E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_53890 439ad0dd469e799e9cdb7f5fb4bf800a 229 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 1.7E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_53890 439ad0dd469e799e9cdb7f5fb4bf800a 229 SMART SM00421 150 207 6.9E-27 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_53890 439ad0dd469e799e9cdb7f5fb4bf800a 229 ProSitePatterns PS00622 LuxR-type HTH domain signature. 167 194 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_19170 30387942081441d2afdf907b14b09078 372 Pfam PF00355 Rieske [2Fe-2S] domain 19 101 1.3E-15 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AMIS_19170 30387942081441d2afdf907b14b09078 372 SUPERFAMILY SSF55961 125 357 3.21E-30 T 14-10-2018 AMIS_19170 30387942081441d2afdf907b14b09078 372 Gene3D G3DSA:3.30.530.90 149 372 8.1E-94 T 14-10-2018 AMIS_19170 30387942081441d2afdf907b14b09078 372 Gene3D G3DSA:2.102.10.10 14 148 3.8E-42 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AMIS_19170 30387942081441d2afdf907b14b09078 372 SUPERFAMILY SSF50022 13 126 9.43E-27 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AMIS_58920 a3552bae9f67a991b1212b8377e079cc 431 SUPERFAMILY SSF140453 86 158 2.35E-5 T 14-10-2018 IPR036689 ESAT-6-like superfamily AMIS_58920 a3552bae9f67a991b1212b8377e079cc 431 Gene3D G3DSA:3.40.1350.120 299 431 5.0E-42 T 14-10-2018 AMIS_8900 b67111b2979ee967846006987051553d 252 SMART SM00637 152 249 6.4E-15 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 AMIS_8900 b67111b2979ee967846006987051553d 252 SUPERFAMILY SSF49384 147 240 1.88E-16 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 AMIS_8900 b67111b2979ee967846006987051553d 252 Gene3D G3DSA:2.60.40.290 147 252 1.4E-17 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 AMIS_8900 b67111b2979ee967846006987051553d 252 Pfam PF00553 Cellulose binding domain 153 249 4.3E-12 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 AMIS_14090 f7fe048116745e5e90391e490470df26 368 SUPERFAMILY SSF110738 2 365 9.42E-98 T 14-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 AMIS_14090 f7fe048116745e5e90391e490470df26 368 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 363 6.6E-98 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AMIS_14090 f7fe048116745e5e90391e490470df26 368 PIRSF PIRSF006078 1 368 4.7E-111 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AMIS_14090 f7fe048116745e5e90391e490470df26 368 Pfam PF02595 Glycerate kinase family 3 366 3.9E-113 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AMIS_14090 f7fe048116745e5e90391e490470df26 368 Gene3D G3DSA:3.40.50.10350 2 353 1.0E-107 T 14-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold AMIS_14090 f7fe048116745e5e90391e490470df26 368 Gene3D G3DSA:3.90.1510.10 40 269 1.0E-107 T 14-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 AMIS_3780 2b17b34cd5d0b7f7c39368b7798ebb66 209 TIGRFAM TIGR03664 fut_nucase: futalosine hydrolase 6 206 1.0E-64 T 14-10-2018 IPR019963 Futalosine hydrolase GO:0009234|GO:0016799 KEGG: 00130+3.2.2.26|MetaCyc: PWY-7374 AMIS_3780 2b17b34cd5d0b7f7c39368b7798ebb66 209 Hamap MF_00991 Futalosine hydrolase [mqnB]. 6 208 23.372 T 14-10-2018 IPR019963 Futalosine hydrolase GO:0009234|GO:0016799 KEGG: 00130+3.2.2.26|MetaCyc: PWY-7374 AMIS_3780 2b17b34cd5d0b7f7c39368b7798ebb66 209 SUPERFAMILY SSF53167 5 197 3.93E-30 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 AMIS_3780 2b17b34cd5d0b7f7c39368b7798ebb66 209 Pfam PF01048 Phosphorylase superfamily 33 204 1.4E-15 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AMIS_3780 2b17b34cd5d0b7f7c39368b7798ebb66 209 Gene3D G3DSA:3.40.50.1580 1 207 1.3E-33 T 14-10-2018 AMIS_33540 ead0d320895a6437a2481afa343d8733 313 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 263 305 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AMIS_33540 ead0d320895a6437a2481afa343d8733 313 Pfam PF12833 Helix-turn-helix domain 232 311 2.7E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMIS_33540 ead0d320895a6437a2481afa343d8733 313 Gene3D G3DSA:1.10.10.60 206 313 9.0E-29 T 14-10-2018 AMIS_33540 ead0d320895a6437a2481afa343d8733 313 SUPERFAMILY SSF46689 262 312 2.91E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_33540 ead0d320895a6437a2481afa343d8733 313 Gene3D G3DSA:3.40.50.880 1 203 1.2E-48 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_33540 ead0d320895a6437a2481afa343d8733 313 SUPERFAMILY SSF46689 211 259 2.75E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_33540 ead0d320895a6437a2481afa343d8733 313 SMART SM00342 226 309 1.8E-28 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMIS_33540 ead0d320895a6437a2481afa343d8733 313 Pfam PF01965 DJ-1/PfpI family 2 169 4.0E-13 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 AMIS_33540 ead0d320895a6437a2481afa343d8733 313 SUPERFAMILY SSF52317 2 191 1.68E-39 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_47210 ddb40904fb27bcfeeb19c514c52dd51d 505 Gene3D G3DSA:3.90.76.10 62 193 3.7E-100 T 14-10-2018 AMIS_47210 ddb40904fb27bcfeeb19c514c52dd51d 505 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 86 410 5.0E-75 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain AMIS_47210 ddb40904fb27bcfeeb19c514c52dd51d 505 Gene3D G3DSA:3.10.105.10 269 478 3.7E-100 T 14-10-2018 AMIS_47210 ddb40904fb27bcfeeb19c514c52dd51d 505 Gene3D G3DSA:3.40.190.10 194 488 3.7E-100 T 14-10-2018 AMIS_47210 ddb40904fb27bcfeeb19c514c52dd51d 505 PIRSF PIRSF002741 3 502 6.0E-82 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AMIS_47210 ddb40904fb27bcfeeb19c514c52dd51d 505 SUPERFAMILY SSF53850 44 503 6.79E-109 T 14-10-2018 AMIS_48560 fbef925008aa363a6214b51fa494805d 254 Gene3D G3DSA:3.40.50.300 1 243 1.2E-48 T 14-10-2018 AMIS_48560 fbef925008aa363a6214b51fa494805d 254 Pfam PF00005 ABC transporter 17 171 5.4E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_48560 fbef925008aa363a6214b51fa494805d 254 SMART SM00382 26 228 2.4E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_48560 fbef925008aa363a6214b51fa494805d 254 SUPERFAMILY SSF52540 2 229 2.02E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_53640 c6fd3e9b8bf52953b79bc0bbb8cd1390 96 Gene3D G3DSA:3.30.70.20 5 82 6.4E-20 T 14-10-2018 AMIS_53640 c6fd3e9b8bf52953b79bc0bbb8cd1390 96 SUPERFAMILY SSF54862 10 82 6.02E-10 T 14-10-2018 AMIS_53640 c6fd3e9b8bf52953b79bc0bbb8cd1390 96 PRINTS PR00352 3Fe-4S ferredoxin signature 13 24 3.5E-6 T 14-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 AMIS_53640 c6fd3e9b8bf52953b79bc0bbb8cd1390 96 PRINTS PR00352 3Fe-4S ferredoxin signature 67 79 3.5E-6 T 14-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 AMIS_53640 c6fd3e9b8bf52953b79bc0bbb8cd1390 96 PRINTS PR00352 3Fe-4S ferredoxin signature 24 34 3.5E-6 T 14-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 AMIS_53640 c6fd3e9b8bf52953b79bc0bbb8cd1390 96 Pfam PF13459 4Fe-4S single cluster domain 11 81 1.2E-18 T 14-10-2018 AMIS_44020 ea32710126173ddd4fe1c4735826f8c3 213 Gene3D G3DSA:1.10.357.10 21 207 6.6E-34 T 14-10-2018 AMIS_44020 ea32710126173ddd4fe1c4735826f8c3 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 70 7.2E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_44020 ea32710126173ddd4fe1c4735826f8c3 213 SUPERFAMILY SSF46689 9 89 1.44E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_53780 9fc04c2c1bb649210d0e1e2838f1a9e7 63 Pfam PF04149 Domain of unknown function (DUF397) 18 56 2.8E-4 T 14-10-2018 IPR007278 Domain of unknown function DUF397 AMIS_24350 091870ff8460699f4c7911ae4ceded60 294 Gene3D G3DSA:3.90.550.10 2 290 1.4E-82 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_24350 091870ff8460699f4c7911ae4ceded60 294 Pfam PF00483 Nucleotidyl transferase 3 235 4.7E-66 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AMIS_24350 091870ff8460699f4c7911ae4ceded60 294 SUPERFAMILY SSF53448 3 285 3.34E-85 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_24350 091870ff8460699f4c7911ae4ceded60 294 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 285 2.4E-134 T 14-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 AMIS_6640 edf9f3f85595e39b8ab54a581d82508e 124 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 2 121 3.2E-24 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 AMIS_6640 edf9f3f85595e39b8ab54a581d82508e 124 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 101 4.1E-15 T 14-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 AMIS_6640 edf9f3f85595e39b8ab54a581d82508e 124 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 13 121 5.0E-11 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 AMIS_6640 edf9f3f85595e39b8ab54a581d82508e 124 Gene3D G3DSA:3.90.470.20 1 122 1.1E-36 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 AMIS_6640 edf9f3f85595e39b8ab54a581d82508e 124 SUPERFAMILY SSF56214 2 121 6.54E-27 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 AMIS_6640 edf9f3f85595e39b8ab54a581d82508e 124 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 122 21.134 T 14-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 AMIS_10670 7ea455a8c2d96c1a97e82769795af279 409 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 14 326 9.7E-31 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 AMIS_10670 7ea455a8c2d96c1a97e82769795af279 409 Gene3D G3DSA:3.40.50.720 109 297 1.9E-100 T 14-10-2018 AMIS_10670 7ea455a8c2d96c1a97e82769795af279 409 SUPERFAMILY SSF52283 9 138 3.19E-40 T 14-10-2018 AMIS_10670 7ea455a8c2d96c1a97e82769795af279 409 Gene3D G3DSA:3.40.50.720 15 312 1.9E-100 T 14-10-2018 AMIS_10670 7ea455a8c2d96c1a97e82769795af279 409 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AMIS_10670 7ea455a8c2d96c1a97e82769795af279 409 SUPERFAMILY SSF55021 331 408 9.47E-16 T 14-10-2018 AMIS_10670 7ea455a8c2d96c1a97e82769795af279 409 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 294 1.4E-48 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AMIS_10670 7ea455a8c2d96c1a97e82769795af279 409 SUPERFAMILY SSF51735 108 295 2.49E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_10670 7ea455a8c2d96c1a97e82769795af279 409 Gene3D G3DSA:3.30.70.260 328 408 5.5E-28 T 14-10-2018 AMIS_10670 7ea455a8c2d96c1a97e82769795af279 409 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AMIS_48120 406db53833e384e21c020de23fcacc47 422 SUPERFAMILY SSF159501 8 405 6.45E-119 T 14-10-2018 AMIS_48120 406db53833e384e21c020de23fcacc47 422 Pfam PF05139 Erythromycin esterase 58 399 1.4E-107 T 14-10-2018 IPR007815 Erythromycin esterase GO:0046677 AMIS_48120 406db53833e384e21c020de23fcacc47 422 Gene3D G3DSA:3.30.1870.10 60 141 7.9E-61 T 14-10-2018 AMIS_48120 406db53833e384e21c020de23fcacc47 422 Gene3D G3DSA:3.40.1660.10 14 400 7.9E-61 T 14-10-2018 AMIS_48120 406db53833e384e21c020de23fcacc47 422 Gene3D G3DSA:1.20.1440.30 142 260 7.9E-61 T 14-10-2018 AMIS_48120 406db53833e384e21c020de23fcacc47 422 PIRSF PIRSF036794 7 410 1.7E-91 T 14-10-2018 IPR014622 Uncharacterised conserved protein UCP036794, erythromycin esterase-type AMIS_53340 fcdbaa26842a08ed357dd72c93e194c3 277 PRINTS PR00111 Alpha/beta hydrolase fold signature 47 62 5.7E-11 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_53340 fcdbaa26842a08ed357dd72c93e194c3 277 PRINTS PR00111 Alpha/beta hydrolase fold signature 217 231 5.7E-11 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_53340 fcdbaa26842a08ed357dd72c93e194c3 277 PRINTS PR00111 Alpha/beta hydrolase fold signature 91 104 5.7E-11 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_53340 fcdbaa26842a08ed357dd72c93e194c3 277 Pfam PF00561 alpha/beta hydrolase fold 22 255 6.6E-24 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_53340 fcdbaa26842a08ed357dd72c93e194c3 277 SUPERFAMILY SSF53474 1 274 1.8E-62 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_53340 fcdbaa26842a08ed357dd72c93e194c3 277 Gene3D G3DSA:3.40.50.1820 3 273 6.7E-85 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_53340 fcdbaa26842a08ed357dd72c93e194c3 277 PRINTS PR00412 Epoxide hydrolase signature 27 45 2.3E-8 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_53340 fcdbaa26842a08ed357dd72c93e194c3 277 PRINTS PR00412 Epoxide hydrolase signature 47 62 2.3E-8 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_53340 fcdbaa26842a08ed357dd72c93e194c3 277 PRINTS PR00412 Epoxide hydrolase signature 249 271 2.3E-8 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_53340 fcdbaa26842a08ed357dd72c93e194c3 277 PRINTS PR00412 Epoxide hydrolase signature 215 231 2.3E-8 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_75930 d3dd240507196c1452f6933b3c1a8ef2 299 PIRSF PIRSF000196 1 298 5.4E-97 T 14-10-2018 IPR008219 Proline dehydrogenase, bacteria and archaea GO:0004657|GO:0010133 KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922 AMIS_75930 d3dd240507196c1452f6933b3c1a8ef2 299 Gene3D G3DSA:3.20.20.530 21 298 1.2E-77 T 14-10-2018 AMIS_75930 d3dd240507196c1452f6933b3c1a8ef2 299 SUPERFAMILY SSF51730 37 291 5.49E-61 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like AMIS_75930 d3dd240507196c1452f6933b3c1a8ef2 299 Pfam PF01619 Proline dehydrogenase 42 289 1.3E-22 T 14-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 AMIS_72770 5ebadc53551db6e4d0d31ba1d85fbaf5 215 Gene3D G3DSA:3.10.129.10 87 215 1.2E-13 T 14-10-2018 AMIS_72770 5ebadc53551db6e4d0d31ba1d85fbaf5 215 SUPERFAMILY SSF54637 79 212 3.16E-20 T 14-10-2018 IPR029069 HotDog domain superfamily AMIS_72930 b936863433450c3c2fe2bacbbe306a11 251 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 44 250 1.3E-60 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 AMIS_72930 b936863433450c3c2fe2bacbbe306a11 251 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 65 226 2.3E-42 T 14-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 AMIS_72930 b936863433450c3c2fe2bacbbe306a11 251 Gene3D G3DSA:3.40.50.620 23 251 2.1E-69 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMIS_72930 b936863433450c3c2fe2bacbbe306a11 251 PIRSF PIRSF000857 15 251 6.6E-87 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 AMIS_72930 b936863433450c3c2fe2bacbbe306a11 251 SUPERFAMILY SSF52402 39 215 1.36E-43 T 14-10-2018 AMIS_73760 8eb70da5364ce728c4232c610cf59c2c 329 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 16 222 6.8E-44 T 14-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMIS_73760 8eb70da5364ce728c4232c610cf59c2c 329 SUPERFAMILY SSF54292 2 101 2.29E-23 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AMIS_73760 8eb70da5364ce728c4232c610cf59c2c 329 Gene3D G3DSA:3.10.20.30 1 101 4.9E-28 T 14-10-2018 IPR012675 Beta-grasp domain superfamily AMIS_73760 8eb70da5364ce728c4232c610cf59c2c 329 Pfam PF13183 4Fe-4S dicluster domain 138 215 7.5E-17 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMIS_73760 8eb70da5364ce728c4232c610cf59c2c 329 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 103 2.4E-27 T 14-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMIS_73760 8eb70da5364ce728c4232c610cf59c2c 329 Gene3D G3DSA:1.10.1060.10 112 234 2.1E-14 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AMIS_73760 8eb70da5364ce728c4232c610cf59c2c 329 SUPERFAMILY SSF46548 121 231 3.31E-18 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AMIS_73760 8eb70da5364ce728c4232c610cf59c2c 329 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 51 59 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AMIS_38490 898522e1620586b9efc1f5247338f6ad 225 Pfam PF01903 CbiX 10 85 3.2E-16 T 14-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 AMIS_38490 898522e1620586b9efc1f5247338f6ad 225 SUPERFAMILY SSF53800 5 212 5.01E-29 T 14-10-2018 AMIS_38490 898522e1620586b9efc1f5247338f6ad 225 Gene3D G3DSA:3.40.50.1400 113 214 6.4E-15 T 14-10-2018 AMIS_38490 898522e1620586b9efc1f5247338f6ad 225 Gene3D G3DSA:3.40.50.1400 2 112 1.9E-24 T 14-10-2018 AMIS_24770 1e75cf46e5fdff6eecd413aee7f9b3cc 259 SMART SM00346 17 106 2.6E-22 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AMIS_24770 1e75cf46e5fdff6eecd413aee7f9b3cc 259 Gene3D G3DSA:3.30.450.40 89 258 6.1E-38 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_24770 1e75cf46e5fdff6eecd413aee7f9b3cc 259 Pfam PF09339 IclR helix-turn-helix domain 20 69 7.1E-12 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AMIS_24770 1e75cf46e5fdff6eecd413aee7f9b3cc 259 SUPERFAMILY SSF55781 76 257 2.03E-36 T 14-10-2018 AMIS_24770 1e75cf46e5fdff6eecd413aee7f9b3cc 259 Gene3D G3DSA:1.10.10.10 16 85 1.1E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_24770 1e75cf46e5fdff6eecd413aee7f9b3cc 259 Pfam PF01614 Bacterial transcriptional regulator 136 254 1.1E-14 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal AMIS_24770 1e75cf46e5fdff6eecd413aee7f9b3cc 259 SUPERFAMILY SSF46785 19 88 2.78E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_35470 9fccd1b78b99efc1a3c4090e85c04bb7 280 SUPERFAMILY SSF52540 6 233 3.04E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_35470 9fccd1b78b99efc1a3c4090e85c04bb7 280 Pfam PF00005 ABC transporter 23 170 4.5E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_35470 9fccd1b78b99efc1a3c4090e85c04bb7 280 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_35470 9fccd1b78b99efc1a3c4090e85c04bb7 280 Gene3D G3DSA:3.40.50.300 6 259 3.2E-66 T 14-10-2018 AMIS_35470 9fccd1b78b99efc1a3c4090e85c04bb7 280 SMART SM00382 31 220 3.2E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_38890 ea2f4babbf942c1fea616a1de7998048 320 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 219 311 1.1E-15 T 14-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal AMIS_38890 ea2f4babbf942c1fea616a1de7998048 320 SMART SM01092 217 315 1.3E-25 T 14-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal AMIS_38890 ea2f4babbf942c1fea616a1de7998048 320 SUPERFAMILY SSF55447 217 313 8.5E-24 T 14-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily AMIS_38890 ea2f4babbf942c1fea616a1de7998048 320 Gene3D G3DSA:3.30.390.50 214 317 2.5E-22 T 14-10-2018 AMIS_38890 ea2f4babbf942c1fea616a1de7998048 320 SUPERFAMILY SSF56176 1 210 8.72E-53 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AMIS_38890 ea2f4babbf942c1fea616a1de7998048 320 Gene3D G3DSA:3.30.465.10 1 211 4.8E-77 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AMIS_38890 ea2f4babbf942c1fea616a1de7998048 320 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 17 210 6.2E-43 T 14-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 AMIS_8840 7d43524ffab4cfea696ecd9b81d02791 171 SUPERFAMILY SSF46785 9 167 3.85E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_8840 7d43524ffab4cfea696ecd9b81d02791 171 Gene3D G3DSA:1.10.10.10 9 90 1.2E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_8840 7d43524ffab4cfea696ecd9b81d02791 171 Pfam PF03551 Transcriptional regulator PadR-like family 13 83 2.0E-6 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal AMIS_68110 dd7339b889e9010abf56e399865c6445 310 Pfam PF01841 Transglutaminase-like superfamily 84 138 1.2E-6 T 14-10-2018 IPR002931 Transglutaminase-like AMIS_68110 dd7339b889e9010abf56e399865c6445 310 Gene3D G3DSA:3.10.620.30 75 156 4.4E-9 T 14-10-2018 AMIS_68110 dd7339b889e9010abf56e399865c6445 310 SUPERFAMILY SSF54001 40 142 1.1E-10 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily AMIS_34560 d5ee07d02d9a4f16079babd7dfab8538 291 Gene3D G3DSA:3.40.50.1820 4 291 3.2E-65 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_34560 d5ee07d02d9a4f16079babd7dfab8538 291 Pfam PF00561 alpha/beta hydrolase fold 27 274 6.1E-18 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_34560 d5ee07d02d9a4f16079babd7dfab8538 291 SUPERFAMILY SSF53474 5 290 3.65E-54 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_62030 14046da19efcc57fe84d077810695b8d 308 Gene3D G3DSA:3.10.25.10 206 307 1.1E-20 T 14-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMIS_62030 14046da19efcc57fe84d077810695b8d 308 Pfam PF02911 Formyl transferase, C-terminal domain 203 299 2.1E-21 T 14-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMIS_62030 14046da19efcc57fe84d077810695b8d 308 Gene3D G3DSA:3.40.50.170 1 205 7.2E-67 T 14-10-2018 AMIS_62030 14046da19efcc57fe84d077810695b8d 308 SUPERFAMILY SSF53328 1 203 7.59E-56 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMIS_62030 14046da19efcc57fe84d077810695b8d 308 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 1 306 1.0E-65 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 AMIS_62030 14046da19efcc57fe84d077810695b8d 308 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 302 31.936 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 AMIS_62030 14046da19efcc57fe84d077810695b8d 308 Pfam PF00551 Formyl transferase 2 179 2.8E-30 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMIS_62030 14046da19efcc57fe84d077810695b8d 308 SUPERFAMILY SSF50486 205 307 1.4E-25 T 14-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 AMIS_61100 25f4a2e83aa078e09597b33680440092 547 Gene3D G3DSA:1.10.274.10 23 141 3.1E-49 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 AMIS_61100 25f4a2e83aa078e09597b33680440092 547 SUPERFAMILY SSF52009 120 231 1.44E-28 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 AMIS_61100 25f4a2e83aa078e09597b33680440092 547 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 179 190 - T 14-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 AMIS_61100 25f4a2e83aa078e09597b33680440092 547 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 283 302 1.5E-18 T 14-10-2018 AMIS_61100 25f4a2e83aa078e09597b33680440092 547 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 427 442 1.5E-18 T 14-10-2018 AMIS_61100 25f4a2e83aa078e09597b33680440092 547 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 444 459 1.5E-18 T 14-10-2018 AMIS_61100 25f4a2e83aa078e09597b33680440092 547 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 480 492 1.5E-18 T 14-10-2018 AMIS_61100 25f4a2e83aa078e09597b33680440092 547 Gene3D G3DSA:3.50.30.10 6 221 3.1E-49 T 14-10-2018 AMIS_61100 25f4a2e83aa078e09597b33680440092 547 SUPERFAMILY SSF51621 247 520 1.07E-88 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AMIS_61100 25f4a2e83aa078e09597b33680440092 547 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 427 445 - T 14-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 AMIS_61100 25f4a2e83aa078e09597b33680440092 547 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 248 520 1.2E-79 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AMIS_61100 25f4a2e83aa078e09597b33680440092 547 Gene3D G3DSA:3.20.20.60 241 546 2.3E-97 T 14-10-2018 AMIS_61100 25f4a2e83aa078e09597b33680440092 547 Pfam PF00391 PEP-utilising enzyme, mobile domain 151 219 3.6E-21 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AMIS_61100 25f4a2e83aa078e09597b33680440092 547 Pfam PF05524 PEP-utilising enzyme, N-terminal 6 121 2.8E-19 T 14-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AMIS_61100 25f4a2e83aa078e09597b33680440092 547 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 4 535 3.7E-116 T 14-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 AMIS_61100 25f4a2e83aa078e09597b33680440092 547 PIRSF PIRSF000732 1 546 2.3E-153 T 14-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 AMIS_61100 25f4a2e83aa078e09597b33680440092 547 SUPERFAMILY SSF47831 27 138 1.7E-19 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 AMIS_180 6ccfafa8d1e070d4654fd04e26cdbbe3 129 Pfam PF00571 CBS domain 71 121 4.8E-12 T 14-10-2018 IPR000644 CBS domain AMIS_180 6ccfafa8d1e070d4654fd04e26cdbbe3 129 Pfam PF00571 CBS domain 5 55 1.7E-10 T 14-10-2018 IPR000644 CBS domain AMIS_180 6ccfafa8d1e070d4654fd04e26cdbbe3 129 Gene3D G3DSA:3.10.580.10 2 125 8.4E-33 T 14-10-2018 AMIS_180 6ccfafa8d1e070d4654fd04e26cdbbe3 129 SMART SM00116 12 59 2.9E-6 T 14-10-2018 IPR000644 CBS domain AMIS_180 6ccfafa8d1e070d4654fd04e26cdbbe3 129 SMART SM00116 77 125 1.1E-8 T 14-10-2018 IPR000644 CBS domain AMIS_180 6ccfafa8d1e070d4654fd04e26cdbbe3 129 SUPERFAMILY SSF54631 3 120 2.53E-29 T 14-10-2018 AMIS_44220 652693be5f355db6b8791d3e4cae08d3 336 Gene3D G3DSA:1.10.260.40 2 60 5.6E-24 T 14-10-2018 AMIS_44220 652693be5f355db6b8791d3e4cae08d3 336 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 14-10-2018 AMIS_44220 652693be5f355db6b8791d3e4cae08d3 336 SUPERFAMILY SSF53822 63 335 5.62E-65 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_44220 652693be5f355db6b8791d3e4cae08d3 336 Pfam PF13377 Periplasmic binding protein-like domain 167 334 1.2E-36 T 14-10-2018 AMIS_44220 652693be5f355db6b8791d3e4cae08d3 336 SUPERFAMILY SSF47413 3 60 6.81E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_44220 652693be5f355db6b8791d3e4cae08d3 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 49 1.6E-16 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_44220 652693be5f355db6b8791d3e4cae08d3 336 Gene3D G3DSA:3.40.50.2300 61 314 1.1E-74 T 14-10-2018 AMIS_44220 652693be5f355db6b8791d3e4cae08d3 336 SMART SM00354 2 72 4.0E-26 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_44220 652693be5f355db6b8791d3e4cae08d3 336 Gene3D G3DSA:3.40.50.2300 158 292 1.1E-74 T 14-10-2018 AMIS_29770 28fd674a849e4c9df5686e93d8f6955b 358 SUPERFAMILY SSF56235 118 274 1.16E-8 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMIS_29770 28fd674a849e4c9df5686e93d8f6955b 358 Pfam PF03417 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase 148 294 3.8E-11 T 14-10-2018 IPR005079 Peptidase C45 AMIS_29770 28fd674a849e4c9df5686e93d8f6955b 358 Gene3D G3DSA:3.60.60.10 92 342 1.7E-26 T 14-10-2018 AMIS_28910 ed8659bed2816dc178509d8dc72a2d94 505 SUPERFAMILY SSF51905 32 485 2.07E-42 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_28910 ed8659bed2816dc178509d8dc72a2d94 505 Gene3D G3DSA:3.50.50.60 35 323 1.6E-24 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_28910 ed8659bed2816dc178509d8dc72a2d94 505 Pfam PF01593 Flavin containing amine oxidoreductase 41 483 1.6E-23 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 AMIS_28910 ed8659bed2816dc178509d8dc72a2d94 505 Gene3D G3DSA:3.90.660.10 117 352 1.6E-24 T 14-10-2018 AMIS_80180 8b6828ef62767f24ea1812f339935ad2 240 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 102 124 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AMIS_80180 8b6828ef62767f24ea1812f339935ad2 240 Pfam PF01066 CDP-alcohol phosphatidyltransferase 49 124 1.7E-8 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AMIS_80180 8b6828ef62767f24ea1812f339935ad2 240 Gene3D G3DSA:1.20.120.1760 20 224 4.4E-24 T 14-10-2018 AMIS_61960 266117f7f0f07d16824a669102c0b178 353 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 52 90 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AMIS_61960 266117f7f0f07d16824a669102c0b178 353 SUPERFAMILY SSF53597 146 343 2.57E-57 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AMIS_61960 266117f7f0f07d16824a669102c0b178 353 Pfam PF01872 RibD C-terminal domain 148 340 2.9E-50 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 AMIS_61960 266117f7f0f07d16824a669102c0b178 353 PIRSF PIRSF006769 1 349 1.4E-119 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 AMIS_61960 266117f7f0f07d16824a669102c0b178 353 Gene3D G3DSA:3.40.430.10 143 351 3.2E-64 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AMIS_61960 266117f7f0f07d16824a669102c0b178 353 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 147 344 3.2E-54 T 14-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 AMIS_61960 266117f7f0f07d16824a669102c0b178 353 Gene3D G3DSA:3.40.140.10 1 142 2.7E-39 T 14-10-2018 AMIS_61960 266117f7f0f07d16824a669102c0b178 353 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 4 101 1.1E-14 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain AMIS_61960 266117f7f0f07d16824a669102c0b178 353 SUPERFAMILY SSF53927 5 145 1.29E-40 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AMIS_61960 266117f7f0f07d16824a669102c0b178 353 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 8 342 4.9E-108 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 AMIS_41500 c234812bc6b91736d66666ffbc4acd14 503 SUPERFAMILY SSF52540 34 224 3.79E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_41500 c234812bc6b91736d66666ffbc4acd14 503 Gene3D G3DSA:3.40.50.300 42 219 2.1E-18 T 14-10-2018 AMIS_41500 c234812bc6b91736d66666ffbc4acd14 503 Pfam PF01926 50S ribosome-binding GTPase 41 184 3.7E-10 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 AMIS_44280 dc64420d0dec9694257d725f74e12766 77 Pfam PF11755 Protein of unknown function (DUF3311) 13 65 4.7E-12 T 14-10-2018 IPR021741 Protein of unknown function DUF3311 AMIS_63100 5b413105113495efc584508140bca0ac 391 SUPERFAMILY SSF50182 171 236 1.31E-13 T 14-10-2018 IPR010920 LSM domain superfamily AMIS_63100 5b413105113495efc584508140bca0ac 391 Pfam PF00924 Mechanosensitive ion channel 132 326 1.4E-26 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AMIS_40400 abcb9d7cd2514d1d683beecdaaba0a6c 160 Pfam PF12697 Alpha/beta hydrolase family 92 152 3.2E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_40400 abcb9d7cd2514d1d683beecdaaba0a6c 160 Pfam PF12697 Alpha/beta hydrolase family 4 84 8.0E-9 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_40400 abcb9d7cd2514d1d683beecdaaba0a6c 160 Gene3D G3DSA:3.40.50.1820 87 159 7.4E-9 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_40400 abcb9d7cd2514d1d683beecdaaba0a6c 160 SUPERFAMILY SSF53474 3 156 2.75E-21 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_40400 abcb9d7cd2514d1d683beecdaaba0a6c 160 Gene3D G3DSA:3.40.50.1820 1 86 2.4E-16 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_62600 1356f6e80a59e6eb3881611de472cfd0 211 PIRSF PIRSF005624 6 211 5.6E-42 T 14-10-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 AMIS_62600 1356f6e80a59e6eb3881611de472cfd0 211 Gene3D G3DSA:3.40.50.300 13 208 2.5E-46 T 14-10-2018 AMIS_62600 1356f6e80a59e6eb3881611de472cfd0 211 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 14 205 1.8E-83 T 14-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 AMIS_62600 1356f6e80a59e6eb3881611de472cfd0 211 Hamap MF_01389 Urease accessory protein UreG [ureG]. 12 210 42.938 T 14-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 AMIS_62600 1356f6e80a59e6eb3881611de472cfd0 211 SUPERFAMILY SSF52540 10 209 2.01E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_62600 1356f6e80a59e6eb3881611de472cfd0 211 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 16 182 1.2E-34 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AMIS_13700 7dcda2f6298970eeb57f69c27099b546 94 SUPERFAMILY SSF140453 2 93 4.19E-17 T 14-10-2018 IPR036689 ESAT-6-like superfamily AMIS_13700 7dcda2f6298970eeb57f69c27099b546 94 Gene3D G3DSA:1.10.287.1060 1 93 9.2E-18 T 14-10-2018 AMIS_13700 7dcda2f6298970eeb57f69c27099b546 94 TIGRFAM TIGR03930 WXG100_ESAT6: WXG100 family type VII secretion target 3 92 6.1E-16 T 14-10-2018 IPR010310 Type VII secretion system ESAT-6-like AMIS_13700 7dcda2f6298970eeb57f69c27099b546 94 Pfam PF06013 Proteins of 100 residues with WXG 3 88 2.2E-15 T 14-10-2018 IPR010310 Type VII secretion system ESAT-6-like AMIS_19380 b2c919d091b4195d3e71c0ecd8b76ccd 602 Gene3D G3DSA:2.60.120.560 36 200 2.7E-28 T 14-10-2018 AMIS_19380 b2c919d091b4195d3e71c0ecd8b76ccd 602 Gene3D G3DSA:2.160.20.10 239 591 2.0E-84 T 14-10-2018 IPR012334 Pectin lyase fold AMIS_19380 b2c919d091b4195d3e71c0ecd8b76ccd 602 SUPERFAMILY SSF49899 79 199 1.79E-5 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily AMIS_19380 b2c919d091b4195d3e71c0ecd8b76ccd 602 SUPERFAMILY SSF51126 237 570 1.29E-43 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor AMIS_39500 c9ce2c60e518b8550338c8c5f43101c1 199 Pfam PF05103 DivIVA protein 8 58 1.0E-7 T 14-10-2018 IPR007793 DivIVA family AMIS_39500 c9ce2c60e518b8550338c8c5f43101c1 199 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 8 44 4.2E-10 T 14-10-2018 IPR019933 DivIVA domain AMIS_54320 d5027884b5a48427b471a701e9ebe74e 521 Gene3D G3DSA:3.30.420.40 250 508 1.4E-75 T 14-10-2018 AMIS_54320 d5027884b5a48427b471a701e9ebe74e 521 SUPERFAMILY SSF53067 1 247 1.02E-57 T 14-10-2018 AMIS_54320 d5027884b5a48427b471a701e9ebe74e 521 PIRSF PIRSF000538 1 499 1.6E-124 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AMIS_54320 d5027884b5a48427b471a701e9ebe74e 521 Gene3D G3DSA:3.30.420.40 1 248 9.7E-66 T 14-10-2018 AMIS_54320 d5027884b5a48427b471a701e9ebe74e 521 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 366 386 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AMIS_54320 d5027884b5a48427b471a701e9ebe74e 521 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 3 247 1.2E-50 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AMIS_54320 d5027884b5a48427b471a701e9ebe74e 521 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 256 453 9.7E-39 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AMIS_54320 d5027884b5a48427b471a701e9ebe74e 521 SUPERFAMILY SSF53067 249 490 1.27E-59 T 14-10-2018 AMIS_58660 7a2ee5725bacff5354efffd32288c78c 599 Pfam PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain 366 584 1.2E-27 T 14-10-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 AMIS_58660 7a2ee5725bacff5354efffd32288c78c 599 Gene3D G3DSA:1.10.246.70 219 285 2.0E-111 T 14-10-2018 AMIS_58660 7a2ee5725bacff5354efffd32288c78c 599 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 72 88 4.0E-14 T 14-10-2018 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 AMIS_58660 7a2ee5725bacff5354efffd32288c78c 599 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 58 67 4.0E-14 T 14-10-2018 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 AMIS_58660 7a2ee5725bacff5354efffd32288c78c 599 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 40 50 4.0E-14 T 14-10-2018 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 AMIS_58660 7a2ee5725bacff5354efffd32288c78c 599 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 563 578 4.0E-14 T 14-10-2018 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 AMIS_58660 7a2ee5725bacff5354efffd32288c78c 599 Gene3D G3DSA:2.60.120.260 387 583 2.0E-111 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_58660 7a2ee5725bacff5354efffd32288c78c 599 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 54 338 6.7E-69 T 14-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 AMIS_58660 7a2ee5725bacff5354efffd32288c78c 599 SUPERFAMILY SSF53474 29 388 2.27E-75 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_58660 7a2ee5725bacff5354efffd32288c78c 599 SUPERFAMILY SSF49785 411 596 3.23E-30 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_58660 7a2ee5725bacff5354efffd32288c78c 599 TIGRFAM TIGR00976 /NonD: hydrolase CocE/NonD family protein 59 327 1.1E-19 T 14-10-2018 IPR005674 CocE/Serine esterase GO:0016787 AMIS_58660 7a2ee5725bacff5354efffd32288c78c 599 Gene3D G3DSA:3.40.50.1820 118 516 2.0E-111 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_58660 7a2ee5725bacff5354efffd32288c78c 599 SMART SM00939 353 597 2.2E-33 T 14-10-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 AMIS_16460 08c8f50b3b59b01587fa39d609b0a41f 253 Gene3D G3DSA:3.40.50.720 2 252 1.1E-57 T 14-10-2018 AMIS_16460 08c8f50b3b59b01587fa39d609b0a41f 253 SUPERFAMILY SSF51735 7 250 3.12E-58 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_16460 08c8f50b3b59b01587fa39d609b0a41f 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 8.9E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_16460 08c8f50b3b59b01587fa39d609b0a41f 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 8.9E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_16460 08c8f50b3b59b01587fa39d609b0a41f 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 8.9E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_16460 08c8f50b3b59b01587fa39d609b0a41f 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 250 4.2E-44 T 14-10-2018 AMIS_63650 933789669a5f5a0a9440991e534817b7 183 SUPERFAMILY SSF55729 33 176 1.72E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_63650 933789669a5f5a0a9440991e534817b7 183 Pfam PF00583 Acetyltransferase (GNAT) family 56 171 6.3E-11 T 14-10-2018 IPR000182 GNAT domain AMIS_63650 933789669a5f5a0a9440991e534817b7 183 Gene3D G3DSA:3.40.630.30 32 182 1.5E-26 T 14-10-2018 AMIS_37920 328edb6ce42c6359731eb708752b15c4 151 SUPERFAMILY SSF55826 3 149 3.01E-32 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 AMIS_37920 328edb6ce42c6359731eb708752b15c4 151 Gene3D G3DSA:3.90.960.10 1 151 1.9E-37 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 AMIS_37920 328edb6ce42c6359731eb708752b15c4 151 Pfam PF04073 Aminoacyl-tRNA editing domain 21 136 7.5E-26 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AMIS_2940 0c0e160a477f88105ef9f0e7eb6ed334 642 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 433 455 2.5E-13 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AMIS_2940 0c0e160a477f88105ef9f0e7eb6ed334 642 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 276 298 2.5E-13 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AMIS_2940 0c0e160a477f88105ef9f0e7eb6ed334 642 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 72 96 2.5E-13 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AMIS_2940 0c0e160a477f88105ef9f0e7eb6ed334 642 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 98 118 2.5E-13 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AMIS_2940 0c0e160a477f88105ef9f0e7eb6ed334 642 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 326 338 1.8E-65 T 14-10-2018 AMIS_2940 0c0e160a477f88105ef9f0e7eb6ed334 642 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 96 121 1.8E-65 T 14-10-2018 AMIS_2940 0c0e160a477f88105ef9f0e7eb6ed334 642 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 171 192 1.8E-65 T 14-10-2018 AMIS_2940 0c0e160a477f88105ef9f0e7eb6ed334 642 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 434 453 1.8E-65 T 14-10-2018 AMIS_2940 0c0e160a477f88105ef9f0e7eb6ed334 642 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 258 284 1.8E-65 T 14-10-2018 AMIS_2940 0c0e160a477f88105ef9f0e7eb6ed334 642 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 236 257 1.8E-65 T 14-10-2018 AMIS_2940 0c0e160a477f88105ef9f0e7eb6ed334 642 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 124 144 1.8E-65 T 14-10-2018 AMIS_2940 0c0e160a477f88105ef9f0e7eb6ed334 642 Pfam PF00361 Proton-conducting membrane transporter 148 435 9.9E-81 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_2940 0c0e160a477f88105ef9f0e7eb6ed334 642 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 17 633 1.5E-211 T 14-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_2940 0c0e160a477f88105ef9f0e7eb6ed334 642 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 78 135 1.2E-22 T 14-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_30300 d797815d588f0b788dfdd1cb8afb8c6d 110 Gene3D G3DSA:3.10.450.50 1 109 9.2E-33 T 14-10-2018 AMIS_30300 d797815d588f0b788dfdd1cb8afb8c6d 110 Pfam PF12680 SnoaL-like domain 11 105 2.2E-7 T 14-10-2018 IPR037401 SnoaL-like domain AMIS_30300 d797815d588f0b788dfdd1cb8afb8c6d 110 SUPERFAMILY SSF54427 3 106 6.76E-11 T 14-10-2018 IPR032710 NTF2-like domain superfamily AMIS_42370 c75218c301143a60e29eee2ffbeb2576 192 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 134 168 1.6E-8 T 14-10-2018 IPR001451 Hexapeptide repeat AMIS_42370 c75218c301143a60e29eee2ffbeb2576 192 SUPERFAMILY SSF51161 30 189 1.05E-40 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily AMIS_42370 c75218c301143a60e29eee2ffbeb2576 192 Gene3D G3DSA:2.160.10.10 7 192 3.2E-56 T 14-10-2018 AMIS_42370 c75218c301143a60e29eee2ffbeb2576 192 SMART SM01266 9 62 4.4E-6 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 AMIS_42370 c75218c301143a60e29eee2ffbeb2576 192 Pfam PF12464 Maltose acetyltransferase 14 61 2.1E-8 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 AMIS_42370 c75218c301143a60e29eee2ffbeb2576 192 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 142 170 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AMIS_60450 8e7c509b89dbce5c2e055ce8ec209d7c 701 SUPERFAMILY SSF50370 329 463 2.01E-19 T 14-10-2018 IPR035992 Ricin B-like lectins AMIS_60450 8e7c509b89dbce5c2e055ce8ec209d7c 701 SUPERFAMILY SSF51110 469 573 2.69E-16 T 14-10-2018 IPR036426 Bulb-type lectin domain superfamily AMIS_60450 8e7c509b89dbce5c2e055ce8ec209d7c 701 Gene3D G3DSA:2.90.10.20 513 570 1.9E-16 T 14-10-2018 AMIS_60450 8e7c509b89dbce5c2e055ce8ec209d7c 701 Pfam PF01453 D-mannose binding lectin 513 571 1.3E-11 T 14-10-2018 IPR001480 Bulb-type lectin domain AMIS_60450 8e7c509b89dbce5c2e055ce8ec209d7c 701 Gene3D G3DSA:2.90.10.10 463 512 9.2E-7 T 14-10-2018 IPR036426 Bulb-type lectin domain superfamily AMIS_60450 8e7c509b89dbce5c2e055ce8ec209d7c 701 SMART SM00108 466 574 1.5E-4 T 14-10-2018 IPR001480 Bulb-type lectin domain AMIS_60450 8e7c509b89dbce5c2e055ce8ec209d7c 701 SUPERFAMILY SSF50370 578 697 2.34E-26 T 14-10-2018 IPR035992 Ricin B-like lectins AMIS_60450 8e7c509b89dbce5c2e055ce8ec209d7c 701 Pfam PF03752 Short repeats of unknown function 116 154 1.3E-7 T 14-10-2018 IPR005506 Protein of unknown function DUF312 AMIS_60450 8e7c509b89dbce5c2e055ce8ec209d7c 701 Gene3D G3DSA:2.80.10.50 325 462 2.3E-19 T 14-10-2018 AMIS_60450 8e7c509b89dbce5c2e055ce8ec209d7c 701 Pfam PF00652 Ricin-type beta-trefoil lectin domain 582 696 2.1E-18 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_60450 8e7c509b89dbce5c2e055ce8ec209d7c 701 Pfam PF00652 Ricin-type beta-trefoil lectin domain 331 462 1.2E-10 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_60450 8e7c509b89dbce5c2e055ce8ec209d7c 701 SMART SM00458 327 465 0.0025 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_60450 8e7c509b89dbce5c2e055ce8ec209d7c 701 SMART SM00458 573 699 1.2E-14 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_60450 8e7c509b89dbce5c2e055ce8ec209d7c 701 Gene3D G3DSA:2.80.10.50 578 697 5.3E-28 T 14-10-2018 AMIS_3870 b231c1da82ca75e8de0cec489e2d1676 355 Pfam PF11268 Protein of unknown function (DUF3071) 1 171 3.5E-46 T 14-10-2018 IPR021421 Protein of unknown function DUF3071 AMIS_10700 c6d13fae4f09201e2209a525afe1054a 362 SUPERFAMILY SSF53474 8 310 2.91E-25 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_10700 c6d13fae4f09201e2209a525afe1054a 362 Gene3D G3DSA:3.40.50.1820 14 314 4.3E-35 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_10700 c6d13fae4f09201e2209a525afe1054a 362 Pfam PF12146 Serine aminopeptidase, S33 40 245 7.1E-18 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 AMIS_58740 76c86b557ba2d824367aa53db45da64a 461 Pfam PF13641 Glycosyltransferase like family 2 90 318 5.2E-28 T 14-10-2018 AMIS_58740 76c86b557ba2d824367aa53db45da64a 461 Gene3D G3DSA:3.90.550.10 84 298 2.2E-46 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_58740 76c86b557ba2d824367aa53db45da64a 461 SUPERFAMILY SSF53448 89 370 1.18E-52 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_9530 01709907e71bb2f173ba737f5b714926 385 SUPERFAMILY SSF53187 4 384 2.34E-56 T 14-10-2018 AMIS_9530 01709907e71bb2f173ba737f5b714926 385 Gene3D G3DSA:3.40.630.10 10 378 1.8E-100 T 14-10-2018 AMIS_9530 01709907e71bb2f173ba737f5b714926 385 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 10 381 2.5E-77 T 14-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 AMIS_9530 01709907e71bb2f173ba737f5b714926 385 Gene3D G3DSA:3.30.70.360 195 307 1.8E-100 T 14-10-2018 AMIS_9530 01709907e71bb2f173ba737f5b714926 385 PIRSF PIRSF001235 2 385 4.5E-103 T 14-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 AMIS_9530 01709907e71bb2f173ba737f5b714926 385 Pfam PF01546 Peptidase family M20/M25/M40 71 382 2.0E-20 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 AMIS_9530 01709907e71bb2f173ba737f5b714926 385 SUPERFAMILY SSF55031 198 302 2.44E-18 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AMIS_67800 a9771f5c4dc70ff245adb59c7dbdf100 110 SUPERFAMILY SSF46785 15 99 1.71E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_67800 a9771f5c4dc70ff245adb59c7dbdf100 110 Pfam PF13601 Winged helix DNA-binding domain 24 102 4.1E-20 T 14-10-2018 IPR027395 Winged helix DNA-binding domain AMIS_67800 a9771f5c4dc70ff245adb59c7dbdf100 110 Gene3D G3DSA:1.10.10.10 14 107 8.8E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_37170 abfecb6ad5396ffdbd85d89ca7289278 332 SUPERFAMILY SSF51679 8 320 5.89E-52 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_37170 abfecb6ad5396ffdbd85d89ca7289278 332 Pfam PF00296 Luciferase-like monooxygenase 23 288 5.8E-33 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMIS_37170 abfecb6ad5396ffdbd85d89ca7289278 332 Gene3D G3DSA:3.20.20.30 10 323 3.7E-54 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_35220 6b06197c6c6a1b73a28d92118c44f8b9 324 TIGRFAM TIGR01188 drrA: daunorubicin resistance ABC transporter, ATP-binding protein 13 304 2.0E-94 T 14-10-2018 IPR005894 Daunorubicin resistance ABC transporter ATP-binding subunit DrrA GO:0005524|GO:0043215|GO:1900753 AMIS_35220 6b06197c6c6a1b73a28d92118c44f8b9 324 Pfam PF00005 ABC transporter 21 164 1.6E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_35220 6b06197c6c6a1b73a28d92118c44f8b9 324 Gene3D G3DSA:3.40.50.300 1 227 2.1E-65 T 14-10-2018 AMIS_35220 6b06197c6c6a1b73a28d92118c44f8b9 324 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_35220 6b06197c6c6a1b73a28d92118c44f8b9 324 SMART SM00382 30 213 8.2E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_35220 6b06197c6c6a1b73a28d92118c44f8b9 324 SUPERFAMILY SSF52540 5 224 1.07E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_4290 7e19efed3820c1a865935dee427cc6e2 214 SMART SM00448 1 120 1.1E-9 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_4290 7e19efed3820c1a865935dee427cc6e2 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 1.8E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_4290 7e19efed3820c1a865935dee427cc6e2 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 1.8E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_4290 7e19efed3820c1a865935dee427cc6e2 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 1.8E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_4290 7e19efed3820c1a865935dee427cc6e2 214 SUPERFAMILY SSF52172 1 135 5.41E-18 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_4290 7e19efed3820c1a865935dee427cc6e2 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 198 4.6E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_4290 7e19efed3820c1a865935dee427cc6e2 214 SMART SM00421 148 205 5.0E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_4290 7e19efed3820c1a865935dee427cc6e2 214 Pfam PF00072 Response regulator receiver domain 3 108 3.6E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_4290 7e19efed3820c1a865935dee427cc6e2 214 Gene3D G3DSA:3.40.50.12740 1 208 1.1E-44 T 14-10-2018 AMIS_4290 7e19efed3820c1a865935dee427cc6e2 214 SUPERFAMILY SSF46894 132 200 9.86E-16 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_62070 8c396f669bab6a8b2ec63ce6c80cd6cf 405 Pfam PF02441 Flavoprotein 3 170 4.6E-38 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AMIS_62070 8c396f669bab6a8b2ec63ce6c80cd6cf 405 SUPERFAMILY SSF52507 4 173 2.49E-54 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 AMIS_62070 8c396f669bab6a8b2ec63ce6c80cd6cf 405 Gene3D G3DSA:3.40.50.10300 178 400 2.6E-76 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 AMIS_62070 8c396f669bab6a8b2ec63ce6c80cd6cf 405 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 3 391 9.3E-112 T 14-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 AMIS_62070 8c396f669bab6a8b2ec63ce6c80cd6cf 405 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 182 366 2.8E-68 T 14-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 AMIS_62070 8c396f669bab6a8b2ec63ce6c80cd6cf 405 SUPERFAMILY SSF102645 181 396 1.7E-67 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 AMIS_62070 8c396f669bab6a8b2ec63ce6c80cd6cf 405 Gene3D G3DSA:3.40.50.1950 2 177 3.2E-50 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 AMIS_79760 7639de077bf5c3a82c3dcf88d3714793 439 Pfam PF07730 Histidine kinase 229 295 1.6E-17 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMIS_79760 7639de077bf5c3a82c3dcf88d3714793 439 Gene3D G3DSA:3.30.565.10 305 429 1.7E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_79760 7639de077bf5c3a82c3dcf88d3714793 439 SUPERFAMILY SSF55874 313 427 2.41E-9 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_53940 d34148aa3d62b3e7543ba308af19f333 225 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 198 1.1E-47 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AMIS_53940 d34148aa3d62b3e7543ba308af19f333 225 SMART SM00855 3 158 7.4E-23 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AMIS_53940 d34148aa3d62b3e7543ba308af19f333 225 TIGRFAM TIGR03848 MSMEG_4193: probable phosphomutase, MSMEG_4193 family 3 200 4.3E-91 T 14-10-2018 IPR022492 Phosphomutase MSMEG4193, putative AMIS_53940 d34148aa3d62b3e7543ba308af19f333 225 Gene3D G3DSA:3.40.50.1240 1 210 1.1E-46 T 14-10-2018 IPR029033 Histidine phosphatase superfamily AMIS_53940 d34148aa3d62b3e7543ba308af19f333 225 SUPERFAMILY SSF53254 1 206 3.05E-45 T 14-10-2018 IPR029033 Histidine phosphatase superfamily AMIS_66050 2116fd70a5cb10d34b4f1a459664ac31 362 Gene3D G3DSA:3.30.200.20 11 100 2.2E-11 T 14-10-2018 AMIS_66050 2116fd70a5cb10d34b4f1a459664ac31 362 Gene3D G3DSA:3.90.1200.10 118 222 1.3E-11 T 14-10-2018 AMIS_66050 2116fd70a5cb10d34b4f1a459664ac31 362 Pfam PF01636 Phosphotransferase enzyme family 31 215 1.1E-14 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase AMIS_66050 2116fd70a5cb10d34b4f1a459664ac31 362 SUPERFAMILY SSF56112 8 324 7.75E-29 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMIS_21670 59f24b123994181b3bc1211bda34e1f9 350 SUPERFAMILY SSF51412 2 252 3.51E-56 T 14-10-2018 AMIS_21670 59f24b123994181b3bc1211bda34e1f9 350 Gene3D G3DSA:3.20.20.70 1 348 6.5E-93 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_21670 59f24b123994181b3bc1211bda34e1f9 350 Pfam PF03060 Nitronate monooxygenase 79 336 2.6E-60 T 14-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 AMIS_24270 75ed9edfa0f4b61eef9e6d16d3cfc66f 343 SUPERFAMILY SSF160240 242 321 7.85E-17 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 AMIS_24270 75ed9edfa0f4b61eef9e6d16d3cfc66f 343 Pfam PF01545 Cation efflux family 46 239 3.4E-35 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AMIS_24270 75ed9edfa0f4b61eef9e6d16d3cfc66f 343 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 44 321 3.5E-66 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AMIS_24270 75ed9edfa0f4b61eef9e6d16d3cfc66f 343 Gene3D G3DSA:3.30.70.1350 242 319 5.6E-15 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 AMIS_24270 75ed9edfa0f4b61eef9e6d16d3cfc66f 343 Pfam PF16916 Dimerisation domain of Zinc Transporter 243 319 2.3E-15 T 14-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain AMIS_24270 75ed9edfa0f4b61eef9e6d16d3cfc66f 343 Gene3D G3DSA:1.20.1510.10 43 239 4.9E-42 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AMIS_24270 75ed9edfa0f4b61eef9e6d16d3cfc66f 343 SUPERFAMILY SSF161111 40 240 3.01E-45 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AMIS_73280 252ac052de7e9902f07ddd3998c60f2b 178 Gene3D G3DSA:3.30.2010.10 80 163 2.1E-11 T 14-10-2018 AMIS_73280 252ac052de7e9902f07ddd3998c60f2b 178 Pfam PF01863 Protein of unknown function DUF45 89 154 2.0E-21 T 14-10-2018 IPR002725 Protein of unknown function DUF45 AMIS_37180 cfca93cafd1279b5f6a381904a6f6f19 207 Gene3D G3DSA:1.10.357.10 1 207 8.4E-48 T 14-10-2018 AMIS_37180 cfca93cafd1279b5f6a381904a6f6f19 207 SUPERFAMILY SSF48498 76 204 7.23E-24 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_37180 cfca93cafd1279b5f6a381904a6f6f19 207 PRINTS PR00400 Tetracycline repressor protein signature 185 199 6.6E-11 T 14-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 AMIS_37180 cfca93cafd1279b5f6a381904a6f6f19 207 PRINTS PR00400 Tetracycline repressor protein signature 26 49 6.6E-11 T 14-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 AMIS_37180 cfca93cafd1279b5f6a381904a6f6f19 207 PRINTS PR00400 Tetracycline repressor protein signature 77 96 6.6E-11 T 14-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 AMIS_37180 cfca93cafd1279b5f6a381904a6f6f19 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 9.7E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_37180 cfca93cafd1279b5f6a381904a6f6f19 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 9.7E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_37180 cfca93cafd1279b5f6a381904a6f6f19 207 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 76 202 1.2E-9 T 14-10-2018 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 AMIS_37180 cfca93cafd1279b5f6a381904a6f6f19 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 59 1.1E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_37180 cfca93cafd1279b5f6a381904a6f6f19 207 SUPERFAMILY SSF46689 2 67 2.24E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_8520 e388d83a53de5a03158cfed33129a098 188 Pfam PF00293 NUDIX domain 49 173 9.8E-12 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMIS_8520 e388d83a53de5a03158cfed33129a098 188 SUPERFAMILY SSF55811 40 183 8.53E-23 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMIS_8520 e388d83a53de5a03158cfed33129a098 188 Gene3D G3DSA:3.90.79.10 7 183 1.1E-36 T 14-10-2018 AMIS_75100 ac0a7bdf8d808762a2ccb695417cc491 293 Pfam PF00398 Ribosomal RNA adenine dimethylase 24 271 7.2E-44 T 14-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm AMIS_75100 ac0a7bdf8d808762a2ccb695417cc491 293 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 20 275 48.925 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 AMIS_75100 ac0a7bdf8d808762a2ccb695417cc491 293 SMART SM00650 36 205 1.1E-64 T 14-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 AMIS_75100 ac0a7bdf8d808762a2ccb695417cc491 293 Gene3D G3DSA:1.10.8.100 212 276 7.3E-20 T 14-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 AMIS_75100 ac0a7bdf8d808762a2ccb695417cc491 293 SUPERFAMILY SSF53335 20 273 2.3E-64 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_75100 ac0a7bdf8d808762a2ccb695417cc491 293 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 52 79 - T 14-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 AMIS_75100 ac0a7bdf8d808762a2ccb695417cc491 293 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 21 272 7.2E-73 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 AMIS_75100 ac0a7bdf8d808762a2ccb695417cc491 293 Gene3D G3DSA:3.40.50.150 2 208 5.5E-59 T 14-10-2018 AMIS_27960 0cb6de3c7850b02ac4cc14d28e2779fb 540 Pfam PF16499 Alpha galactosidase A 35 319 5.1E-72 T 14-10-2018 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AMIS_27960 0cb6de3c7850b02ac4cc14d28e2779fb 540 PRINTS PR00740 Glycosyl hydrolase family 27 signature 176 194 1.7E-35 T 14-10-2018 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AMIS_27960 0cb6de3c7850b02ac4cc14d28e2779fb 540 PRINTS PR00740 Glycosyl hydrolase family 27 signature 29 48 1.7E-35 T 14-10-2018 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AMIS_27960 0cb6de3c7850b02ac4cc14d28e2779fb 540 PRINTS PR00740 Glycosyl hydrolase family 27 signature 275 296 1.7E-35 T 14-10-2018 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AMIS_27960 0cb6de3c7850b02ac4cc14d28e2779fb 540 PRINTS PR00740 Glycosyl hydrolase family 27 signature 65 80 1.7E-35 T 14-10-2018 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AMIS_27960 0cb6de3c7850b02ac4cc14d28e2779fb 540 PRINTS PR00740 Glycosyl hydrolase family 27 signature 147 164 1.7E-35 T 14-10-2018 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AMIS_27960 0cb6de3c7850b02ac4cc14d28e2779fb 540 SUPERFAMILY SSF50370 413 538 1.61E-34 T 14-10-2018 IPR035992 Ricin B-like lectins AMIS_27960 0cb6de3c7850b02ac4cc14d28e2779fb 540 Pfam PF00652 Ricin-type beta-trefoil lectin domain 417 537 6.5E-27 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_27960 0cb6de3c7850b02ac4cc14d28e2779fb 540 Gene3D G3DSA:3.20.20.70 32 322 1.8E-114 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_27960 0cb6de3c7850b02ac4cc14d28e2779fb 540 SUPERFAMILY SSF51445 28 319 9.48E-87 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_27960 0cb6de3c7850b02ac4cc14d28e2779fb 540 ProSitePatterns PS00512 Alpha-galactosidase signature. 70 86 - T 14-10-2018 IPR000111 Glycoside hydrolase family 27/36, conserved site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AMIS_27960 0cb6de3c7850b02ac4cc14d28e2779fb 540 Pfam PF17450 Alpha galactosidase A C-terminal beta sandwich domain 322 400 3.6E-8 T 14-10-2018 IPR035373 Alpha galactosidase A, C-terminal beta-sandwich domain AMIS_27960 0cb6de3c7850b02ac4cc14d28e2779fb 540 SUPERFAMILY SSF51011 322 407 2.36E-21 T 14-10-2018 AMIS_27960 0cb6de3c7850b02ac4cc14d28e2779fb 540 SMART SM00458 414 540 3.3E-27 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_27960 0cb6de3c7850b02ac4cc14d28e2779fb 540 Gene3D G3DSA:2.80.10.50 413 539 2.0E-34 T 14-10-2018 AMIS_27960 0cb6de3c7850b02ac4cc14d28e2779fb 540 Gene3D G3DSA:2.60.40.1180 323 407 1.9E-24 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta AMIS_11030 ec71d82ce119cd17db43cd8a3b259f64 131 Pfam PF17174 Domain of unknown function (DUF5130) 8 121 2.2E-28 T 14-10-2018 IPR033437 Protein of unknown function DUF5130 AMIS_11030 ec71d82ce119cd17db43cd8a3b259f64 131 Gene3D G3DSA:3.10.310.50 14 131 2.1E-8 T 14-10-2018 AMIS_29360 9cd30f2ceba96913eddcf00cb6ba5150 415 SUPERFAMILY SSF55874 300 410 2.06E-14 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_29360 9cd30f2ceba96913eddcf00cb6ba5150 415 SMART SM00387 320 412 1.0E-6 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_29360 9cd30f2ceba96913eddcf00cb6ba5150 415 Pfam PF07730 Histidine kinase 213 275 1.7E-16 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMIS_29360 9cd30f2ceba96913eddcf00cb6ba5150 415 Gene3D G3DSA:3.30.565.10 288 411 2.8E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_48360 1c0c9cd1b64e560f06174deff41c1697 420 Gene3D G3DSA:1.10.630.10 17 418 1.4E-114 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_48360 1c0c9cd1b64e560f06174deff41c1697 420 Pfam PF00067 Cytochrome P450 286 381 9.2E-17 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_48360 1c0c9cd1b64e560f06174deff41c1697 420 PRINTS PR00385 P450 superfamily signature 252 269 7.9E-5 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_48360 1c0c9cd1b64e560f06174deff41c1697 420 PRINTS PR00385 P450 superfamily signature 288 299 7.9E-5 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_48360 1c0c9cd1b64e560f06174deff41c1697 420 PRINTS PR00385 P450 superfamily signature 355 364 7.9E-5 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_48360 1c0c9cd1b64e560f06174deff41c1697 420 PRINTS PR00385 P450 superfamily signature 364 375 7.9E-5 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_48360 1c0c9cd1b64e560f06174deff41c1697 420 SUPERFAMILY SSF48264 37 415 3.54E-85 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_48360 1c0c9cd1b64e560f06174deff41c1697 420 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 357 366 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 AMIS_48360 1c0c9cd1b64e560f06174deff41c1697 420 PRINTS PR00359 B-class P450 signature 364 375 1.2E-48 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_48360 1c0c9cd1b64e560f06174deff41c1697 420 PRINTS PR00359 B-class P450 signature 102 113 1.2E-48 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_48360 1c0c9cd1b64e560f06174deff41c1697 420 PRINTS PR00359 B-class P450 signature 355 364 1.2E-48 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_48360 1c0c9cd1b64e560f06174deff41c1697 420 PRINTS PR00359 B-class P450 signature 208 230 1.2E-48 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_48360 1c0c9cd1b64e560f06174deff41c1697 420 PRINTS PR00359 B-class P450 signature 288 299 1.2E-48 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_48360 1c0c9cd1b64e560f06174deff41c1697 420 PRINTS PR00359 B-class P450 signature 333 348 1.2E-48 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_48360 1c0c9cd1b64e560f06174deff41c1697 420 PRINTS PR00359 B-class P450 signature 305 332 1.2E-48 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_48360 1c0c9cd1b64e560f06174deff41c1697 420 PRINTS PR00359 B-class P450 signature 148 164 1.2E-48 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_48360 1c0c9cd1b64e560f06174deff41c1697 420 PRINTS PR00359 B-class P450 signature 165 180 1.2E-48 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_37970 63683e5eeb8f9faf149757af29e077b6 357 Pfam PF00990 Diguanylate cyclase, GGDEF domain 192 353 7.3E-33 T 14-10-2018 IPR000160 GGDEF domain AMIS_37970 63683e5eeb8f9faf149757af29e077b6 357 SUPERFAMILY SSF55073 197 352 4.79E-36 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_37970 63683e5eeb8f9faf149757af29e077b6 357 Gene3D G3DSA:3.30.70.270 179 357 2.4E-49 T 14-10-2018 AMIS_37970 63683e5eeb8f9faf149757af29e077b6 357 SMART SM00267 181 357 2.1E-42 T 14-10-2018 IPR000160 GGDEF domain AMIS_37970 63683e5eeb8f9faf149757af29e077b6 357 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 188 353 9.0E-32 T 14-10-2018 IPR000160 GGDEF domain AMIS_6550 c0df0bbba4d8aaf341cf4a3fb95c363e 381 SMART SM00862 310 379 4.8E-11 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_6550 c0df0bbba4d8aaf341cf4a3fb95c363e 381 Pfam PF00486 Transcriptional regulatory protein, C terminal 315 379 1.8E-8 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_6550 c0df0bbba4d8aaf341cf4a3fb95c363e 381 Gene3D G3DSA:3.40.50.10090 32 277 8.6E-62 T 14-10-2018 AMIS_6550 c0df0bbba4d8aaf341cf4a3fb95c363e 381 Gene3D G3DSA:3.40.50.10090 58 194 8.6E-62 T 14-10-2018 AMIS_6550 c0df0bbba4d8aaf341cf4a3fb95c363e 381 Gene3D G3DSA:1.10.10.10 289 381 2.5E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_6550 c0df0bbba4d8aaf341cf4a3fb95c363e 381 Pfam PF02602 Uroporphyrinogen-III synthase HemD 39 278 4.3E-40 T 14-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMIS_6550 c0df0bbba4d8aaf341cf4a3fb95c363e 381 SUPERFAMILY SSF46894 292 379 9.64E-11 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_6550 c0df0bbba4d8aaf341cf4a3fb95c363e 381 SUPERFAMILY SSF69618 27 287 8.89E-55 T 14-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMIS_8220 1473a2292ca950ec480fa00d28f8ed76 633 SUPERFAMILY SSF51126 327 495 1.4E-9 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor AMIS_8220 1473a2292ca950ec480fa00d28f8ed76 633 Gene3D G3DSA:2.160.20.10 326 574 2.1E-11 T 14-10-2018 IPR012334 Pectin lyase fold AMIS_77730 c7240a1e5639db794c90c212946448ab 285 Gene3D G3DSA:3.20.20.70 127 273 4.8E-96 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_77730 c7240a1e5639db794c90c212946448ab 285 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 17 281 5.0E-88 T 14-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 AMIS_77730 c7240a1e5639db794c90c212946448ab 285 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 27 115 2.0E-26 T 14-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 AMIS_77730 c7240a1e5639db794c90c212946448ab 285 SUPERFAMILY SSF54675 11 116 1.29E-27 T 14-10-2018 AMIS_77730 c7240a1e5639db794c90c212946448ab 285 Gene3D G3DSA:3.90.1170.20 12 280 4.8E-96 T 14-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 AMIS_77730 c7240a1e5639db794c90c212946448ab 285 SUPERFAMILY SSF51690 117 282 8.63E-55 T 14-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AMIS_77730 c7240a1e5639db794c90c212946448ab 285 PIRSF PIRSF006250 7 284 1.2E-82 T 14-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 AMIS_77730 c7240a1e5639db794c90c212946448ab 285 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 117 281 3.6E-53 T 14-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 AMIS_29280 b239ce8e4b2b593820f681e1601f294c 247 SUPERFAMILY SSF52540 12 229 3.48E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_29280 b239ce8e4b2b593820f681e1601f294c 247 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_29280 b239ce8e4b2b593820f681e1601f294c 247 Gene3D G3DSA:3.40.50.300 10 241 2.5E-68 T 14-10-2018 AMIS_29280 b239ce8e4b2b593820f681e1601f294c 247 SMART SM00382 40 225 5.4E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_29280 b239ce8e4b2b593820f681e1601f294c 247 Pfam PF00005 ABC transporter 32 177 3.8E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_59320 02281d61ae08ede40c4bcb464ba2fc8e 311 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 30 84 2.4E-6 T 14-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 AMIS_59320 02281d61ae08ede40c4bcb464ba2fc8e 311 SUPERFAMILY SSF51735 2 118 2.0E-12 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_59320 02281d61ae08ede40c4bcb464ba2fc8e 311 Gene3D G3DSA:3.40.50.720 2 134 5.5E-15 T 14-10-2018 AMIS_16110 a850f888bd321b81eb54c526c0876d19 398 SUPERFAMILY SSF53748 3 397 6.71E-140 T 14-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_16110 a850f888bd321b81eb54c526c0876d19 398 PIRSF PIRSF000724 1 398 6.5E-132 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_16110 a850f888bd321b81eb54c526c0876d19 398 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 16 26 - T 14-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_16110 a850f888bd321b81eb54c526c0876d19 398 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 3 398 40.684 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_16110 a850f888bd321b81eb54c526c0876d19 398 Gene3D G3DSA:3.40.50.1260 12 396 3.7E-143 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_16110 a850f888bd321b81eb54c526c0876d19 398 PRINTS PR00477 Phosphoglycerate kinase family signature 317 342 4.7E-77 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_16110 a850f888bd321b81eb54c526c0876d19 398 PRINTS PR00477 Phosphoglycerate kinase family signature 198 217 4.7E-77 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_16110 a850f888bd321b81eb54c526c0876d19 398 PRINTS PR00477 Phosphoglycerate kinase family signature 11 27 4.7E-77 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_16110 a850f888bd321b81eb54c526c0876d19 398 PRINTS PR00477 Phosphoglycerate kinase family signature 35 57 4.7E-77 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_16110 a850f888bd321b81eb54c526c0876d19 398 PRINTS PR00477 Phosphoglycerate kinase family signature 175 197 4.7E-77 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_16110 a850f888bd321b81eb54c526c0876d19 398 PRINTS PR00477 Phosphoglycerate kinase family signature 350 361 4.7E-77 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_16110 a850f888bd321b81eb54c526c0876d19 398 PRINTS PR00477 Phosphoglycerate kinase family signature 374 391 4.7E-77 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_16110 a850f888bd321b81eb54c526c0876d19 398 PRINTS PR00477 Phosphoglycerate kinase family signature 145 167 4.7E-77 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_16110 a850f888bd321b81eb54c526c0876d19 398 PRINTS PR00477 Phosphoglycerate kinase family signature 113 128 4.7E-77 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_16110 a850f888bd321b81eb54c526c0876d19 398 Gene3D G3DSA:3.40.50.1260 177 388 3.7E-143 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_16110 a850f888bd321b81eb54c526c0876d19 398 Pfam PF00162 Phosphoglycerate kinase 12 388 7.1E-145 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_32810 eef8cf9636ca470f311de58c83700f6a 175 Pfam PF04525 LURP-one-related 7 156 4.0E-21 T 14-10-2018 IPR007612 LURP-one-related AMIS_32810 eef8cf9636ca470f311de58c83700f6a 175 SUPERFAMILY SSF54518 8 160 6.8E-36 T 14-10-2018 IPR025659 Tubby-like, C-terminal AMIS_32810 eef8cf9636ca470f311de58c83700f6a 175 Gene3D G3DSA:3.20.90.20 3 166 3.0E-16 T 14-10-2018 IPR038595 LURP-one-related superfamily AMIS_56500 c1c14a11d397580232570fabd84d242f 490 Pfam PF00501 AMP-binding enzyme 12 387 1.2E-101 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMIS_56500 c1c14a11d397580232570fabd84d242f 490 Gene3D G3DSA:3.30.300.310 384 483 4.1E-31 T 14-10-2018 AMIS_56500 c1c14a11d397580232570fabd84d242f 490 SUPERFAMILY SSF56801 12 482 7.06E-150 T 14-10-2018 AMIS_56500 c1c14a11d397580232570fabd84d242f 490 Gene3D G3DSA:3.40.50.12780 3 381 4.6E-116 T 14-10-2018 AMIS_56500 c1c14a11d397580232570fabd84d242f 490 ProSitePatterns PS00455 Putative AMP-binding domain signature. 148 159 - T 14-10-2018 IPR020845 AMP-binding, conserved site AMIS_56500 c1c14a11d397580232570fabd84d242f 490 Pfam PF13193 AMP-binding enzyme C-terminal domain 397 472 4.2E-21 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AMIS_64710 3ab4517b9185261e1f0c859344ba04d6 325 Gene3D G3DSA:1.10.510.10 163 322 1.4E-9 T 14-10-2018 AMIS_64710 3ab4517b9185261e1f0c859344ba04d6 325 SUPERFAMILY SSF56112 116 270 1.68E-9 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMIS_23880 33ca593d2802153966439a34204e03de 496 Pfam PF07944 Beta-L-arabinofuranosidase, GH127 51 393 3.2E-89 T 14-10-2018 IPR012878 Beta-L-arabinofuranosidase, GH127 AMIS_23880 33ca593d2802153966439a34204e03de 496 SUPERFAMILY SSF48208 57 217 6.33E-11 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AMIS_47590 5cf360d00a58080861fd49ef8a878bac 244 Pfam PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase 3 80 1.6E-32 T 14-10-2018 IPR028991 D-lysine 5,6-aminomutase beta subunit KamE, N-terminal GO:0046983 AMIS_47590 5cf360d00a58080861fd49ef8a878bac 244 Gene3D G3DSA:3.40.50.280 85 241 4.0E-33 T 14-10-2018 AMIS_47590 5cf360d00a58080861fd49ef8a878bac 244 SUPERFAMILY SSF52242 98 241 2.09E-30 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 AMIS_47590 5cf360d00a58080861fd49ef8a878bac 244 Pfam PF02310 B12 binding domain 104 230 1.3E-19 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 AMIS_47590 5cf360d00a58080861fd49ef8a878bac 244 Gene3D G3DSA:3.30.30.60 15 66 1.6E-22 T 14-10-2018 IPR036843 D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain superfamily GO:0046983 AMIS_47590 5cf360d00a58080861fd49ef8a878bac 244 SUPERFAMILY SSF117778 15 66 3.27E-19 T 14-10-2018 IPR036843 D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain superfamily GO:0046983 AMIS_48500 67908a5cafb8f1cbb7b513386f147aec 1156 SUPERFAMILY SSF90123 6 313 3.27E-35 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMIS_48500 67908a5cafb8f1cbb7b513386f147aec 1156 SUPERFAMILY SSF52540 312 539 4.09E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_48500 67908a5cafb8f1cbb7b513386f147aec 1156 Pfam PF00664 ABC transporter transmembrane region 47 263 2.4E-17 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AMIS_48500 67908a5cafb8f1cbb7b513386f147aec 1156 Gene3D G3DSA:1.20.1560.10 608 898 1.4E-11 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMIS_48500 67908a5cafb8f1cbb7b513386f147aec 1156 Pfam PF00005 ABC transporter 950 1091 4.9E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_48500 67908a5cafb8f1cbb7b513386f147aec 1156 Gene3D G3DSA:3.40.50.300 928 1155 1.3E-52 T 14-10-2018 AMIS_48500 67908a5cafb8f1cbb7b513386f147aec 1156 SUPERFAMILY SSF52540 933 1154 8.98E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_48500 67908a5cafb8f1cbb7b513386f147aec 1156 Gene3D G3DSA:1.20.1560.10 1 306 8.0E-31 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMIS_48500 67908a5cafb8f1cbb7b513386f147aec 1156 SUPERFAMILY SSF90123 598 895 3.66E-16 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMIS_48500 67908a5cafb8f1cbb7b513386f147aec 1156 SMART SM00382 345 529 4.1E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_48500 67908a5cafb8f1cbb7b513386f147aec 1156 SMART SM00382 958 1137 4.3E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_48500 67908a5cafb8f1cbb7b513386f147aec 1156 Gene3D G3DSA:3.40.50.300 307 550 1.8E-68 T 14-10-2018 AMIS_48500 67908a5cafb8f1cbb7b513386f147aec 1156 ProSitePatterns PS00211 ABC transporters family signature. 1065 1079 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_48500 67908a5cafb8f1cbb7b513386f147aec 1156 Pfam PF00005 ABC transporter 336 484 1.5E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_72660 0d8a89fef818561818f556fb88d142ba 284 SUPERFAMILY SSF52151 7 210 8.55E-49 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMIS_72660 0d8a89fef818561818f556fb88d142ba 284 Pfam PF01734 Patatin-like phospholipase 12 180 2.9E-29 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 AMIS_72660 0d8a89fef818561818f556fb88d142ba 284 Gene3D G3DSA:3.40.1090.10 5 96 1.9E-16 T 14-10-2018 AMIS_72660 0d8a89fef818561818f556fb88d142ba 284 Gene3D G3DSA:3.40.1090.10 99 200 3.3E-14 T 14-10-2018 AMIS_2570 a7cebbb178105b9380e8c2e731ecc7df 84 Pfam PF06974 Protein of unknown function (DUF1298) 7 64 1.7E-4 T 14-10-2018 IPR009721 O-acyltransferase WSD1, C-terminal GO:0004144 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 AMIS_29340 8adbb2ef4c4af1d677481a0ea0bea91d 301 Gene3D G3DSA:3.90.180.10 8 298 5.4E-64 T 14-10-2018 AMIS_29340 8adbb2ef4c4af1d677481a0ea0bea91d 301 Pfam PF13602 Zinc-binding dehydrogenase 198 299 8.3E-14 T 14-10-2018 AMIS_29340 8adbb2ef4c4af1d677481a0ea0bea91d 301 SMART SM00829 10 299 2.8E-13 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMIS_29340 8adbb2ef4c4af1d677481a0ea0bea91d 301 SUPERFAMILY SSF50129 1 147 1.22E-30 T 14-10-2018 IPR011032 GroES-like superfamily AMIS_29340 8adbb2ef4c4af1d677481a0ea0bea91d 301 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 88 1.3E-8 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMIS_29340 8adbb2ef4c4af1d677481a0ea0bea91d 301 Gene3D G3DSA:3.40.50.720 124 250 5.4E-64 T 14-10-2018 AMIS_29340 8adbb2ef4c4af1d677481a0ea0bea91d 301 SUPERFAMILY SSF51735 114 297 1.39E-22 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_67610 80990345ae32c0d952a281e411151bc1 569 Gene3D G3DSA:1.20.140.10 281 443 1.8E-44 T 14-10-2018 AMIS_67610 80990345ae32c0d952a281e411151bc1 569 SUPERFAMILY SSF47203 273 443 4.19E-43 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMIS_67610 80990345ae32c0d952a281e411151bc1 569 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 275 435 2.0E-23 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMIS_67610 80990345ae32c0d952a281e411151bc1 569 Gene3D G3DSA:2.40.110.10 159 280 7.0E-31 T 14-10-2018 AMIS_67610 80990345ae32c0d952a281e411151bc1 569 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 38 155 8.9E-9 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMIS_67610 80990345ae32c0d952a281e411151bc1 569 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 6 33 4.2E-10 T 14-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria AMIS_67610 80990345ae32c0d952a281e411151bc1 569 Gene3D G3DSA:1.10.540.10 10 157 7.4E-13 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMIS_67610 80990345ae32c0d952a281e411151bc1 569 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 161 265 3.8E-18 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMIS_67610 80990345ae32c0d952a281e411151bc1 569 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 451 563 4.9E-27 T 14-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain AMIS_67610 80990345ae32c0d952a281e411151bc1 569 SUPERFAMILY SSF56645 35 273 1.27E-54 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMIS_55350 44d6d09d211c616bc0c36ec1ed98725e 168 Pfam PF01590 GAF domain 27 159 4.2E-9 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_55350 44d6d09d211c616bc0c36ec1ed98725e 168 SUPERFAMILY SSF55781 27 159 1.18E-14 T 14-10-2018 AMIS_55350 44d6d09d211c616bc0c36ec1ed98725e 168 Gene3D G3DSA:3.30.450.40 17 165 7.7E-15 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_50080 ba5447fa50dac50fc3c3aed9238571d3 188 Gene3D G3DSA:1.10.357.10 2 188 1.0E-44 T 14-10-2018 AMIS_50080 ba5447fa50dac50fc3c3aed9238571d3 188 SUPERFAMILY SSF46689 5 85 1.18E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_50080 ba5447fa50dac50fc3c3aed9238571d3 188 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 58 7.8E-14 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_50080 ba5447fa50dac50fc3c3aed9238571d3 188 SUPERFAMILY SSF48498 79 163 2.67E-7 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_50080 ba5447fa50dac50fc3c3aed9238571d3 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 7.3E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_50080 ba5447fa50dac50fc3c3aed9238571d3 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 7.3E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_47970 0180a1f8217792583d48d88705bdfe09 198 Gene3D G3DSA:3.30.460.40 25 126 3.1E-16 T 14-10-2018 AMIS_47970 0180a1f8217792583d48d88705bdfe09 198 Pfam PF10706 Aminoglycoside-2''-adenylyltransferase 35 82 1.5E-7 T 14-10-2018 IPR019646 Aminoglycoside-2''-adenylyltransferase AMIS_81000 43944f1e57a0060ab2968122e9f6aee5 151 SUPERFAMILY SSF46767 61 141 1.57E-30 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 AMIS_81000 43944f1e57a0060ab2968122e9f6aee5 151 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 112 118 - T 14-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AMIS_81000 43944f1e57a0060ab2968122e9f6aee5 151 Gene3D G3DSA:3.30.160.70 2 56 7.4E-8 T 14-10-2018 AMIS_81000 43944f1e57a0060ab2968122e9f6aee5 151 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 3 142 39.102 T 14-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 AMIS_81000 43944f1e57a0060ab2968122e9f6aee5 151 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 63 141 4.9E-31 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AMIS_81000 43944f1e57a0060ab2968122e9f6aee5 151 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 63 141 1.0E-32 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AMIS_81000 43944f1e57a0060ab2968122e9f6aee5 151 SUPERFAMILY SSF53155 2 62 1.75E-9 T 14-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AMIS_81000 43944f1e57a0060ab2968122e9f6aee5 151 Gene3D G3DSA:1.10.10.10 60 143 4.7E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_50650 0754960a3cb33648ed06b1c4ee643d8d 399 Gene3D G3DSA:3.40.47.10 2 250 1.1E-53 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_50650 0754960a3cb33648ed06b1c4ee643d8d 399 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 233 6.9E-38 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AMIS_50650 0754960a3cb33648ed06b1c4ee643d8d 399 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 246 352 5.3E-19 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal AMIS_50650 0754960a3cb33648ed06b1c4ee643d8d 399 SUPERFAMILY SSF53901 210 396 3.01E-39 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_50650 0754960a3cb33648ed06b1c4ee643d8d 399 Gene3D G3DSA:3.40.47.10 251 399 1.1E-36 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_50650 0754960a3cb33648ed06b1c4ee643d8d 399 SUPERFAMILY SSF53901 3 241 7.68E-54 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_38480 93aae4be460c5bc0b8b09a35c80a65a7 366 Gene3D G3DSA:1.10.10.10 270 365 1.1E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_38480 93aae4be460c5bc0b8b09a35c80a65a7 366 Gene3D G3DSA:3.40.50.10090 12 258 3.8E-69 T 14-10-2018 AMIS_38480 93aae4be460c5bc0b8b09a35c80a65a7 366 SMART SM00862 291 360 4.9E-14 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_38480 93aae4be460c5bc0b8b09a35c80a65a7 366 Pfam PF00486 Transcriptional regulatory protein, C terminal 296 360 2.9E-12 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_38480 93aae4be460c5bc0b8b09a35c80a65a7 366 SUPERFAMILY SSF69618 8 267 8.11E-59 T 14-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMIS_38480 93aae4be460c5bc0b8b09a35c80a65a7 366 Gene3D G3DSA:3.40.50.10090 39 177 3.8E-69 T 14-10-2018 AMIS_38480 93aae4be460c5bc0b8b09a35c80a65a7 366 SUPERFAMILY SSF46894 273 362 1.84E-14 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_38480 93aae4be460c5bc0b8b09a35c80a65a7 366 Pfam PF02602 Uroporphyrinogen-III synthase HemD 20 259 8.7E-46 T 14-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMIS_17690 d5961906da3ff4dd7d04749c6bae4d57 397 Pfam PF00512 His Kinase A (phospho-acceptor) domain 179 234 5.3E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_17690 d5961906da3ff4dd7d04749c6bae4d57 397 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 288 394 1.5E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_17690 d5961906da3ff4dd7d04749c6bae4d57 397 Pfam PF01590 GAF domain 28 153 5.6E-12 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_17690 d5961906da3ff4dd7d04749c6bae4d57 397 Gene3D G3DSA:1.10.287.130 164 239 3.4E-14 T 14-10-2018 AMIS_17690 d5961906da3ff4dd7d04749c6bae4d57 397 SUPERFAMILY SSF55874 235 394 4.85E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_17690 d5961906da3ff4dd7d04749c6bae4d57 397 SMART SM00065 23 165 1.8E-8 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_17690 d5961906da3ff4dd7d04749c6bae4d57 397 Gene3D G3DSA:3.30.450.40 6 163 3.3E-20 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_17690 d5961906da3ff4dd7d04749c6bae4d57 397 SUPERFAMILY SSF55781 27 159 8.92E-26 T 14-10-2018 AMIS_17690 d5961906da3ff4dd7d04749c6bae4d57 397 Gene3D G3DSA:3.30.565.10 248 397 1.7E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_17690 d5961906da3ff4dd7d04749c6bae4d57 397 SUPERFAMILY SSF47384 166 238 1.57E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_17690 d5961906da3ff4dd7d04749c6bae4d57 397 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 394 1.7E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_17690 d5961906da3ff4dd7d04749c6bae4d57 397 PRINTS PR00344 Bacterial sensor protein C-terminal signature 323 337 1.7E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_17690 d5961906da3ff4dd7d04749c6bae4d57 397 PRINTS PR00344 Bacterial sensor protein C-terminal signature 358 376 1.7E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_17690 d5961906da3ff4dd7d04749c6bae4d57 397 PRINTS PR00344 Bacterial sensor protein C-terminal signature 341 351 1.7E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_17690 d5961906da3ff4dd7d04749c6bae4d57 397 SMART SM00388 177 242 3.2E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_17690 d5961906da3ff4dd7d04749c6bae4d57 397 SMART SM00387 287 397 5.8E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_30770 d67a6a0e411d4adb5b6b0261a6916558 288 Pfam PF01522 Polysaccharide deacetylase 108 227 4.8E-24 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMIS_30770 d67a6a0e411d4adb5b6b0261a6916558 288 Gene3D G3DSA:3.20.20.370 104 288 1.2E-32 T 14-10-2018 AMIS_30770 d67a6a0e411d4adb5b6b0261a6916558 288 SUPERFAMILY SSF88713 95 287 9.12E-36 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AMIS_11640 fcb9f6bd038957135d0a2bf98ddcb92a 327 Gene3D G3DSA:3.30.200.20 27 113 3.5E-5 T 14-10-2018 AMIS_11640 fcb9f6bd038957135d0a2bf98ddcb92a 327 Pfam PF01636 Phosphotransferase enzyme family 59 271 9.6E-13 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase AMIS_11640 fcb9f6bd038957135d0a2bf98ddcb92a 327 Gene3D G3DSA:3.90.1200.10 160 296 2.0E-6 T 14-10-2018 AMIS_11640 fcb9f6bd038957135d0a2bf98ddcb92a 327 SUPERFAMILY SSF56112 28 287 2.05E-24 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMIS_69340 65d60edd250b4c7747cde64175c15e2a 511 Gene3D G3DSA:3.30.300.50 40 119 2.8E-11 T 14-10-2018 IPR035070 Streptogrisin prodomain AMIS_69340 65d60edd250b4c7747cde64175c15e2a 511 Pfam PF00089 Trypsin 219 376 1.8E-11 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 AMIS_69340 65d60edd250b4c7747cde64175c15e2a 511 SUPERFAMILY SSF50494 200 379 3.03E-34 T 14-10-2018 IPR009003 Peptidase S1, PA clan AMIS_69340 65d60edd250b4c7747cde64175c15e2a 511 PRINTS PR00861 Alpha-lytic endopeptidase serine protease (S2A) signature 225 239 1.3E-39 T 14-10-2018 IPR001316 Peptidase S1A, streptogrisin GO:0004252|GO:0006508 AMIS_69340 65d60edd250b4c7747cde64175c15e2a 511 PRINTS PR00861 Alpha-lytic endopeptidase serine protease (S2A) signature 307 324 1.3E-39 T 14-10-2018 IPR001316 Peptidase S1A, streptogrisin GO:0004252|GO:0006508 AMIS_69340 65d60edd250b4c7747cde64175c15e2a 511 PRINTS PR00861 Alpha-lytic endopeptidase serine protease (S2A) signature 350 364 1.3E-39 T 14-10-2018 IPR001316 Peptidase S1A, streptogrisin GO:0004252|GO:0006508 AMIS_69340 65d60edd250b4c7747cde64175c15e2a 511 PRINTS PR00861 Alpha-lytic endopeptidase serine protease (S2A) signature 286 306 1.3E-39 T 14-10-2018 IPR001316 Peptidase S1A, streptogrisin GO:0004252|GO:0006508 AMIS_69340 65d60edd250b4c7747cde64175c15e2a 511 PRINTS PR00861 Alpha-lytic endopeptidase serine protease (S2A) signature 326 349 1.3E-39 T 14-10-2018 IPR001316 Peptidase S1A, streptogrisin GO:0004252|GO:0006508 AMIS_69340 65d60edd250b4c7747cde64175c15e2a 511 Gene3D G3DSA:2.40.10.10 211 383 3.1E-67 T 14-10-2018 AMIS_69340 65d60edd250b4c7747cde64175c15e2a 511 Gene3D G3DSA:3.30.300.50 122 192 2.5E-9 T 14-10-2018 IPR035070 Streptogrisin prodomain AMIS_69340 65d60edd250b4c7747cde64175c15e2a 511 Gene3D G3DSA:2.40.10.10 274 372 3.1E-67 T 14-10-2018 AMIS_69340 65d60edd250b4c7747cde64175c15e2a 511 Pfam PF02983 Alpha-lytic protease prodomain 124 181 1.0E-16 T 14-10-2018 IPR004236 Peptidase S1A, alpha-lytic prodomain GO:0005576|GO:0006508|GO:0008236 AMIS_44030 f39a18865657e0fafbfab905eb65f6a7 597 SUPERFAMILY SSF51905 68 282 8.42E-43 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_44030 f39a18865657e0fafbfab905eb65f6a7 597 SUPERFAMILY SSF51905 202 443 3.74E-37 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_44030 f39a18865657e0fafbfab905eb65f6a7 597 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 68 278 5.5E-11 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMIS_44030 f39a18865657e0fafbfab905eb65f6a7 597 Gene3D G3DSA:3.50.50.60 61 375 3.0E-57 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_44030 f39a18865657e0fafbfab905eb65f6a7 597 SUPERFAMILY SSF51905 344 587 2.92E-10 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_44030 f39a18865657e0fafbfab905eb65f6a7 597 Gene3D G3DSA:3.50.50.60 407 595 1.4E-25 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_17910 7611c1cdb6e9487c7befb1df5cc3126d 293 Pfam PF03631 Virulence factor BrkB 61 288 5.5E-16 T 14-10-2018 IPR017039 Virulence factor BrkB AMIS_1700 7a595cc963f356e34dcd02a3328eaf9d 343 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 177 341 3.4E-14 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_1700 7a595cc963f356e34dcd02a3328eaf9d 343 Gene3D G3DSA:3.60.40.10 154 341 1.5E-44 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_1700 7a595cc963f356e34dcd02a3328eaf9d 343 Gene3D G3DSA:3.30.565.10 22 145 6.1E-12 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_1700 7a595cc963f356e34dcd02a3328eaf9d 343 SUPERFAMILY SSF55874 40 141 2.76E-9 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_1700 7a595cc963f356e34dcd02a3328eaf9d 343 SUPERFAMILY SSF81606 162 341 7.85E-13 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_1700 7a595cc963f356e34dcd02a3328eaf9d 343 Pfam PF13581 Histidine kinase-like ATPase domain 28 120 2.1E-6 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_1700 7a595cc963f356e34dcd02a3328eaf9d 343 SMART SM00331 149 342 7.3E-13 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_52150 2cb7e038b04b64485964b6b7181a946e 523 PIRSF PIRSF000110 16 523 7.8E-170 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMIS_52150 2cb7e038b04b64485964b6b7181a946e 523 SUPERFAMILY SSF55347 210 520 5.56E-110 T 14-10-2018 AMIS_52150 2cb7e038b04b64485964b6b7181a946e 523 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 222 520 2.3E-112 T 14-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMIS_52150 2cb7e038b04b64485964b6b7181a946e 523 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 176 189 5.4E-46 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMIS_52150 2cb7e038b04b64485964b6b7181a946e 523 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 252 269 5.4E-46 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMIS_52150 2cb7e038b04b64485964b6b7181a946e 523 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 200 228 5.4E-46 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMIS_52150 2cb7e038b04b64485964b6b7181a946e 523 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 270 286 5.4E-46 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMIS_52150 2cb7e038b04b64485964b6b7181a946e 523 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 361 387 5.4E-46 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMIS_52150 2cb7e038b04b64485964b6b7181a946e 523 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 42 521 1.6E-183 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMIS_52150 2cb7e038b04b64485964b6b7181a946e 523 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 45 220 2.2E-50 T 14-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMIS_52150 2cb7e038b04b64485964b6b7181a946e 523 SUPERFAMILY SSF51735 30 223 7.28E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_52150 2cb7e038b04b64485964b6b7181a946e 523 Gene3D G3DSA:3.40.50.720 38 208 5.2E-47 T 14-10-2018 AMIS_52150 2cb7e038b04b64485964b6b7181a946e 523 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 41 521 81.72 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMIS_52150 2cb7e038b04b64485964b6b7181a946e 523 Gene3D G3DSA:3.30.360.10 209 522 2.4E-123 T 14-10-2018 AMIS_68910 bc66cd82d5bdb8f5173256ff17dca455 972 Gene3D G3DSA:3.20.70.20 65 711 3.8E-194 T 14-10-2018 AMIS_68910 bc66cd82d5bdb8f5173256ff17dca455 972 Pfam PF02867 Ribonucleotide reductase, barrel domain 160 695 1.3E-139 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMIS_68910 bc66cd82d5bdb8f5173256ff17dca455 972 TIGRFAM TIGR02504 NrdJ_Z: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 98 705 2.3E-180 T 14-10-2018 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMIS_68910 bc66cd82d5bdb8f5173256ff17dca455 972 PRINTS PR01183 Ribonucleotide reductase large chain signature 434 456 2.2E-11 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMIS_68910 bc66cd82d5bdb8f5173256ff17dca455 972 PRINTS PR01183 Ribonucleotide reductase large chain signature 541 568 2.2E-11 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMIS_68910 bc66cd82d5bdb8f5173256ff17dca455 972 PRINTS PR01183 Ribonucleotide reductase large chain signature 362 373 2.2E-11 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMIS_68910 bc66cd82d5bdb8f5173256ff17dca455 972 PRINTS PR01183 Ribonucleotide reductase large chain signature 235 254 2.2E-11 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMIS_68910 bc66cd82d5bdb8f5173256ff17dca455 972 SUPERFAMILY SSF51998 160 699 1.98E-129 T 14-10-2018 AMIS_68910 bc66cd82d5bdb8f5173256ff17dca455 972 Pfam PF08471 Class II vitamin B12-dependent ribonucleotide reductase 56 139 1.6E-19 T 14-10-2018 IPR013678 Ribonucleotide reductase class II vitamin B12-dependent, N-terminal domain GO:0004748|GO:0050897|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMIS_79550 c8d2ba3d216bc3e3b947e196ca63566c 215 ProSitePatterns PS00622 LuxR-type HTH domain signature. 169 196 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_79550 c8d2ba3d216bc3e3b947e196ca63566c 215 SUPERFAMILY SSF46894 147 215 5.1E-22 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_79550 c8d2ba3d216bc3e3b947e196ca63566c 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 169 1.1E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_79550 c8d2ba3d216bc3e3b947e196ca63566c 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 185 1.1E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_79550 c8d2ba3d216bc3e3b947e196ca63566c 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 197 1.1E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_79550 c8d2ba3d216bc3e3b947e196ca63566c 215 Pfam PF00072 Response regulator receiver domain 7 118 7.9E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_79550 c8d2ba3d216bc3e3b947e196ca63566c 215 SMART SM00448 4 117 2.1E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_79550 c8d2ba3d216bc3e3b947e196ca63566c 215 Gene3D G3DSA:3.40.50.12740 4 215 2.2E-69 T 14-10-2018 AMIS_79550 c8d2ba3d216bc3e3b947e196ca63566c 215 SMART SM00421 152 209 5.2E-27 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_79550 c8d2ba3d216bc3e3b947e196ca63566c 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 154 209 8.5E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_79550 c8d2ba3d216bc3e3b947e196ca63566c 215 SUPERFAMILY SSF52172 4 137 5.98E-33 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_71580 c8a0540c81b010724b0d404077e7e62b 483 SUPERFAMILY SSF51445 15 329 2.11E-74 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_71580 c8a0540c81b010724b0d404077e7e62b 483 PRINTS PR00133 Glycosyl hydrolase family 3 signature 88 107 9.0E-6 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMIS_71580 c8a0540c81b010724b0d404077e7e62b 483 PRINTS PR00133 Glycosyl hydrolase family 3 signature 242 260 9.0E-6 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMIS_71580 c8a0540c81b010724b0d404077e7e62b 483 PRINTS PR00133 Glycosyl hydrolase family 3 signature 166 182 9.0E-6 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMIS_71580 c8a0540c81b010724b0d404077e7e62b 483 Gene3D G3DSA:3.20.20.300 21 341 3.5E-98 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 AMIS_71580 c8a0540c81b010724b0d404077e7e62b 483 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 32 324 5.5E-74 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMIS_57850 e47e0b8136c3c6ef4e5166f929eec64c 101 Pfam PF02583 Metal-sensitive transcriptional repressor 17 94 1.1E-30 T 14-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 AMIS_57850 e47e0b8136c3c6ef4e5166f929eec64c 101 Gene3D G3DSA:1.20.58.1000 3 99 2.0E-33 T 14-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily AMIS_2820 eb9efc5d17aee3852965e7bcba81e8e9 429 SUPERFAMILY SSF51905 13 384 1.27E-48 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_2820 eb9efc5d17aee3852965e7bcba81e8e9 429 Gene3D G3DSA:3.50.50.60 11 427 1.1E-95 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_2820 eb9efc5d17aee3852965e7bcba81e8e9 429 Pfam PF01494 FAD binding domain 13 183 4.0E-15 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 AMIS_2820 eb9efc5d17aee3852965e7bcba81e8e9 429 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 300 315 2.7E-10 T 14-10-2018 AMIS_2820 eb9efc5d17aee3852965e7bcba81e8e9 429 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 15 37 2.7E-10 T 14-10-2018 AMIS_2820 eb9efc5d17aee3852965e7bcba81e8e9 429 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 162 177 2.7E-10 T 14-10-2018 AMIS_2820 eb9efc5d17aee3852965e7bcba81e8e9 429 TIGRFAM TIGR02032 GG-red-SF: geranylgeranyl reductase family 15 335 1.4E-74 T 14-10-2018 IPR011777 Geranylgeranyl reductase family GO:0016628|GO:0055114 AMIS_30740 2dcf0feb98d91d8236f09beafdb89d6c 294 Pfam PF00561 alpha/beta hydrolase fold 23 140 5.0E-14 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_30740 2dcf0feb98d91d8236f09beafdb89d6c 294 SUPERFAMILY SSF53474 9 287 4.79E-43 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_30740 2dcf0feb98d91d8236f09beafdb89d6c 294 Gene3D G3DSA:3.40.50.1820 2 289 3.9E-64 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_30740 2dcf0feb98d91d8236f09beafdb89d6c 294 PRINTS PR00412 Epoxide hydrolase signature 48 63 6.3E-12 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_30740 2dcf0feb98d91d8236f09beafdb89d6c 294 PRINTS PR00412 Epoxide hydrolase signature 28 46 6.3E-12 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_30740 2dcf0feb98d91d8236f09beafdb89d6c 294 PRINTS PR00412 Epoxide hydrolase signature 110 123 6.3E-12 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_30740 2dcf0feb98d91d8236f09beafdb89d6c 294 PRINTS PR00412 Epoxide hydrolase signature 267 289 6.3E-12 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_30740 2dcf0feb98d91d8236f09beafdb89d6c 294 PRINTS PR00412 Epoxide hydrolase signature 96 109 6.3E-12 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_71560 69ef25ca0f67f79b3af1d495a9b37cea 285 SUPERFAMILY SSF52540 23 264 4.32E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_71560 69ef25ca0f67f79b3af1d495a9b37cea 285 Gene3D G3DSA:3.40.50.300 16 280 8.5E-55 T 14-10-2018 AMIS_71560 69ef25ca0f67f79b3af1d495a9b37cea 285 Pfam PF00005 ABC transporter 46 197 9.8E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_71560 69ef25ca0f67f79b3af1d495a9b37cea 285 SMART SM00382 54 251 5.2E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_31390 f4050bc060adc76f720de9354a7a671b 418 Pfam PF00067 Cytochrome P450 81 384 9.6E-36 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_31390 f4050bc060adc76f720de9354a7a671b 418 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 356 365 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 AMIS_31390 f4050bc060adc76f720de9354a7a671b 418 SUPERFAMILY SSF48264 13 415 6.02E-105 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_31390 f4050bc060adc76f720de9354a7a671b 418 Gene3D G3DSA:1.10.630.10 8 417 6.3E-142 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_31390 f4050bc060adc76f720de9354a7a671b 418 PRINTS PR00385 P450 superfamily signature 354 363 8.7E-8 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_31390 f4050bc060adc76f720de9354a7a671b 418 PRINTS PR00385 P450 superfamily signature 252 269 8.7E-8 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_31390 f4050bc060adc76f720de9354a7a671b 418 PRINTS PR00385 P450 superfamily signature 287 298 8.7E-8 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_31390 f4050bc060adc76f720de9354a7a671b 418 PRINTS PR00385 P450 superfamily signature 363 374 8.7E-8 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_31390 f4050bc060adc76f720de9354a7a671b 418 PRINTS PR00359 B-class P450 signature 363 374 4.3E-47 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_31390 f4050bc060adc76f720de9354a7a671b 418 PRINTS PR00359 B-class P450 signature 354 363 4.3E-47 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_31390 f4050bc060adc76f720de9354a7a671b 418 PRINTS PR00359 B-class P450 signature 305 332 4.3E-47 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_31390 f4050bc060adc76f720de9354a7a671b 418 PRINTS PR00359 B-class P450 signature 136 152 4.3E-47 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_31390 f4050bc060adc76f720de9354a7a671b 418 PRINTS PR00359 B-class P450 signature 153 168 4.3E-47 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_31390 f4050bc060adc76f720de9354a7a671b 418 PRINTS PR00359 B-class P450 signature 287 298 4.3E-47 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_31390 f4050bc060adc76f720de9354a7a671b 418 PRINTS PR00359 B-class P450 signature 333 348 4.3E-47 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_31390 f4050bc060adc76f720de9354a7a671b 418 PRINTS PR00359 B-class P450 signature 90 101 4.3E-47 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_59900 c6b008e734694d5a5ee16a1c2f3ff45a 437 Gene3D G3DSA:3.40.190.10 35 434 8.4E-66 T 14-10-2018 AMIS_59900 c6b008e734694d5a5ee16a1c2f3ff45a 437 SUPERFAMILY SSF53850 24 432 5.89E-71 T 14-10-2018 AMIS_59900 c6b008e734694d5a5ee16a1c2f3ff45a 437 Pfam PF13416 Bacterial extracellular solute-binding protein 55 364 6.0E-30 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein AMIS_6020 80305871b3e715174647b9716cf59e95 102 Gene3D G3DSA:3.30.70.600 1 102 6.3E-39 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily AMIS_6020 80305871b3e715174647b9716cf59e95 102 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 3.3E-20 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_6020 80305871b3e715174647b9716cf59e95 102 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 3.3E-20 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_6020 80305871b3e715174647b9716cf59e95 102 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 3.3E-20 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_6020 80305871b3e715174647b9716cf59e95 102 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 14-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_6020 80305871b3e715174647b9716cf59e95 102 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 3.5E-37 T 14-10-2018 IPR027486 Ribosomal protein S10 domain AMIS_6020 80305871b3e715174647b9716cf59e95 102 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.897 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_6020 80305871b3e715174647b9716cf59e95 102 SMART SM01403 7 101 8.3E-60 T 14-10-2018 IPR027486 Ribosomal protein S10 domain AMIS_6020 80305871b3e715174647b9716cf59e95 102 SUPERFAMILY SSF54999 5 102 2.22E-39 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily AMIS_6020 80305871b3e715174647b9716cf59e95 102 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 6.0E-48 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_73730 05a7cf775c05bbe6712e55d6f322506c 481 SUPERFAMILY SSF111283 13 478 6.15E-58 T 14-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 AMIS_73730 05a7cf775c05bbe6712e55d6f322506c 481 Pfam PF01523 Putative modulator of DNA gyrase 24 319 1.1E-36 T 14-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AMIS_73730 05a7cf775c05bbe6712e55d6f322506c 481 Gene3D G3DSA:3.30.2290.10 2 231 2.3E-9 T 14-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal AMIS_32750 1cc1cdd8c219b4b3311ad31531a838b2 523 SUPERFAMILY SSF69318 260 520 1.57E-27 T 14-10-2018 AMIS_32750 1cc1cdd8c219b4b3311ad31531a838b2 523 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 380 447 2.2E-6 T 14-10-2018 AMIS_32750 1cc1cdd8c219b4b3311ad31531a838b2 523 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 268 335 3.2E-8 T 14-10-2018 AMIS_47040 00e1cd529bf8ef767692f7f62de8f09e 286 Gene3D G3DSA:1.20.120.1630 81 281 3.6E-13 T 14-10-2018 AMIS_47040 00e1cd529bf8ef767692f7f62de8f09e 286 Pfam PF06966 Protein of unknown function (DUF1295) 48 274 9.8E-52 T 14-10-2018 IPR010721 Protein of unknown function DUF1295 AMIS_49880 c1007b6e7a4e444fcd8cf9c093efdbc9 301 Pfam PF01636 Phosphotransferase enzyme family 33 253 2.5E-30 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase AMIS_49880 c1007b6e7a4e444fcd8cf9c093efdbc9 301 Gene3D G3DSA:3.30.200.20 15 102 4.4E-20 T 14-10-2018 AMIS_49880 c1007b6e7a4e444fcd8cf9c093efdbc9 301 SUPERFAMILY SSF56112 6 285 2.83E-37 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMIS_49880 c1007b6e7a4e444fcd8cf9c093efdbc9 301 Gene3D G3DSA:3.90.1200.10 115 295 1.5E-20 T 14-10-2018 AMIS_48650 7bbada5dbdf2bbbad037f817ab703a2b 216 Gene3D G3DSA:1.10.3630.10 2 214 7.4E-8 T 14-10-2018 IPR038261 Golgi phosphoprotein 3-like domain superfamily AMIS_48650 7bbada5dbdf2bbbad037f817ab703a2b 216 Pfam PF05719 Golgi phosphoprotein 3 (GPP34) 10 205 9.5E-29 T 14-10-2018 IPR008628 Golgi phosphoprotein 3-like GO:0070273 AMIS_34240 4df7e92497174d0596b186adcd949e43 415 SUPERFAMILY SSF55874 304 414 2.41E-11 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_34240 4df7e92497174d0596b186adcd949e43 415 Pfam PF07730 Histidine kinase 228 294 5.3E-15 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMIS_34240 4df7e92497174d0596b186adcd949e43 415 Gene3D G3DSA:3.30.565.10 295 415 1.6E-23 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_29900 e871138847037dee50222d4a0af679cd 693 Gene3D G3DSA:3.20.20.70 279 597 3.1E-125 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_29900 e871138847037dee50222d4a0af679cd 693 PIRSF PIRSF005536 3 689 8.7E-184 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AMIS_29900 e871138847037dee50222d4a0af679cd 693 ProSitePatterns PS00512 Alpha-galactosidase signature. 326 342 - T 14-10-2018 IPR000111 Glycoside hydrolase family 27/36, conserved site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AMIS_29900 e871138847037dee50222d4a0af679cd 693 Gene3D G3DSA:2.70.98.60 3 278 3.1E-74 T 14-10-2018 IPR038417 Alpha-galactosidase, N-terminal domain superfamily KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AMIS_29900 e871138847037dee50222d4a0af679cd 693 Gene3D G3DSA:2.60.40.1180 598 691 5.3E-6 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta AMIS_29900 e871138847037dee50222d4a0af679cd 693 Pfam PF16875 Glycosyl hydrolase family 36 N-terminal domain 31 253 2.2E-56 T 14-10-2018 IPR031704 Glycosyl hydrolase family 36, N-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AMIS_29900 e871138847037dee50222d4a0af679cd 693 Pfam PF02065 Melibiase 258 600 3.0E-120 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AMIS_29900 e871138847037dee50222d4a0af679cd 693 SUPERFAMILY SSF51445 294 605 4.12E-98 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_29900 e871138847037dee50222d4a0af679cd 693 Pfam PF16874 Glycosyl hydrolase family 36 C-terminal domain 619 686 1.3E-9 T 14-10-2018 IPR031705 Glycosyl hydrolase family 36, C-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AMIS_29900 e871138847037dee50222d4a0af679cd 693 PRINTS PR00743 Glycosyl hydrolase family 36 signature 433 448 6.5E-52 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AMIS_29900 e871138847037dee50222d4a0af679cd 693 PRINTS PR00743 Glycosyl hydrolase family 36 signature 485 501 6.5E-52 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AMIS_29900 e871138847037dee50222d4a0af679cd 693 PRINTS PR00743 Glycosyl hydrolase family 36 signature 325 340 6.5E-52 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AMIS_29900 e871138847037dee50222d4a0af679cd 693 PRINTS PR00743 Glycosyl hydrolase family 36 signature 297 311 6.5E-52 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AMIS_29900 e871138847037dee50222d4a0af679cd 693 PRINTS PR00743 Glycosyl hydrolase family 36 signature 510 526 6.5E-52 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AMIS_29900 e871138847037dee50222d4a0af679cd 693 PRINTS PR00743 Glycosyl hydrolase family 36 signature 261 281 6.5E-52 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AMIS_29900 e871138847037dee50222d4a0af679cd 693 PRINTS PR00743 Glycosyl hydrolase family 36 signature 210 225 6.5E-52 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AMIS_29900 e871138847037dee50222d4a0af679cd 693 PRINTS PR00743 Glycosyl hydrolase family 36 signature 375 397 6.5E-52 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AMIS_23810 9ffa3996990e0a0723b44b9f4ff854e0 449 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 26 424 5.0E-134 T 14-10-2018 IPR004736 MFS transporter, metabolite:H symporter GO:0016021|GO:0022857|GO:0055085 AMIS_23810 9ffa3996990e0a0723b44b9f4ff854e0 449 Pfam PF00083 Sugar (and other) transporter 20 439 1.9E-34 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AMIS_23810 9ffa3996990e0a0723b44b9f4ff854e0 449 Gene3D G3DSA:1.20.1250.20 16 446 2.3E-69 T 14-10-2018 AMIS_23810 9ffa3996990e0a0723b44b9f4ff854e0 449 SUPERFAMILY SSF103473 11 440 1.29E-63 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_23810 9ffa3996990e0a0723b44b9f4ff854e0 449 ProSitePatterns PS00216 Sugar transport proteins signature 1. 305 322 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AMIS_56010 628be566a861ba2ecaa2a5f4bc224c6c 249 SMART SM01134 71 232 4.8E-55 T 14-10-2018 AMIS_56010 628be566a861ba2ecaa2a5f4bc224c6c 249 SUPERFAMILY SSF100950 76 233 7.7E-25 T 14-10-2018 IPR037171 NagB/RpiA transferase-like AMIS_56010 628be566a861ba2ecaa2a5f4bc224c6c 249 SUPERFAMILY SSF46785 1 55 1.58E-6 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_56010 628be566a861ba2ecaa2a5f4bc224c6c 249 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.1E-5 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AMIS_56010 628be566a861ba2ecaa2a5f4bc224c6c 249 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.1E-5 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AMIS_56010 628be566a861ba2ecaa2a5f4bc224c6c 249 Pfam PF00455 DeoR C terminal sensor domain 74 230 2.3E-43 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain AMIS_56010 628be566a861ba2ecaa2a5f4bc224c6c 249 SMART SM00420 6 58 1.1E-5 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AMIS_56010 628be566a861ba2ecaa2a5f4bc224c6c 249 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 3.7E-11 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AMIS_78360 f403ba456c044dbb10860390ce8e1609 106 SUPERFAMILY SSF54913 2 105 3.67E-28 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AMIS_78360 f403ba456c044dbb10860390ce8e1609 106 Pfam PF03091 CutA1 divalent ion tolerance protein 8 103 1.5E-27 T 14-10-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 AMIS_78360 f403ba456c044dbb10860390ce8e1609 106 Gene3D G3DSA:3.30.70.120 1 106 2.3E-29 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AMIS_73260 765ea283c5e0b6064167c74a585ba13e 411 TIGRFAM TIGR03624 TIGR03624: putative hydrolase 43 391 2.6E-117 T 14-10-2018 IPR018766 Zinicin-like metallopeptidase type 2 AMIS_73260 765ea283c5e0b6064167c74a585ba13e 411 SUPERFAMILY SSF55486 42 390 2.05E-109 T 14-10-2018 AMIS_73260 765ea283c5e0b6064167c74a585ba13e 411 Pfam PF10103 Zincin-like metallopeptidase 43 389 4.0E-118 T 14-10-2018 IPR018766 Zinicin-like metallopeptidase type 2 AMIS_73260 765ea283c5e0b6064167c74a585ba13e 411 Gene3D G3DSA:1.20.150.30 43 174 6.4E-8 T 14-10-2018 AMIS_14960 87885867a226c9dedb7ef7970b0f7c0c 270 SUPERFAMILY SSF51735 2 240 1.54E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_14960 87885867a226c9dedb7ef7970b0f7c0c 270 Gene3D G3DSA:3.40.50.720 1 270 4.5E-66 T 14-10-2018 AMIS_14960 87885867a226c9dedb7ef7970b0f7c0c 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.3E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_14960 87885867a226c9dedb7ef7970b0f7c0c 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 1.3E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_14960 87885867a226c9dedb7ef7970b0f7c0c 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 1.3E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_14960 87885867a226c9dedb7ef7970b0f7c0c 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.3E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_14960 87885867a226c9dedb7ef7970b0f7c0c 270 Pfam PF00106 short chain dehydrogenase 4 196 1.1E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_55980 dd9cd0b180d156c18c8ef17e991c54b1 438 SUPERFAMILY SSF51101 301 435 1.31E-21 T 14-10-2018 IPR036404 Jacalin-like lectin domain superfamily AMIS_55980 dd9cd0b180d156c18c8ef17e991c54b1 438 SMART SM00915 312 437 1.9E-6 T 14-10-2018 IPR001229 Jacalin-like lectin domain AMIS_55980 dd9cd0b180d156c18c8ef17e991c54b1 438 Gene3D G3DSA:3.60.10.10 26 294 1.2E-28 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AMIS_55980 dd9cd0b180d156c18c8ef17e991c54b1 438 Gene3D G3DSA:2.100.10.30 302 437 3.5E-17 T 14-10-2018 IPR036404 Jacalin-like lectin domain superfamily AMIS_55980 dd9cd0b180d156c18c8ef17e991c54b1 438 SUPERFAMILY SSF56219 29 293 3.01E-38 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AMIS_55980 dd9cd0b180d156c18c8ef17e991c54b1 438 Pfam PF01419 Jacalin-like lectin domain 350 435 5.2E-6 T 14-10-2018 IPR001229 Jacalin-like lectin domain AMIS_78670 01b4a26ec6149db2a570dfb82d3cbb47 352 SUPERFAMILY SSF47802 5 77 1.71E-8 T 14-10-2018 IPR027421 DNA polymerase lambda lyase domain superfamily AMIS_78670 01b4a26ec6149db2a570dfb82d3cbb47 352 PIRSF PIRSF036978 2 352 9.5E-146 T 14-10-2018 IPR017078 Uncharacterised conserved protein UCP036978, histidinol phosphatase-related hydrolase, SCO0789 AMIS_78670 01b4a26ec6149db2a570dfb82d3cbb47 352 Pfam PF14716 Helix-hairpin-helix domain 8 72 4.2E-11 T 14-10-2018 IPR010996 DNA polymerase beta-like, N-terminal domain AMIS_78670 01b4a26ec6149db2a570dfb82d3cbb47 352 Gene3D G3DSA:3.20.20.140 97 352 7.0E-68 T 14-10-2018 AMIS_78670 01b4a26ec6149db2a570dfb82d3cbb47 352 SMART SM00481 104 184 3.1E-18 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal AMIS_78670 01b4a26ec6149db2a570dfb82d3cbb47 352 Pfam PF02811 PHP domain 105 192 5.9E-9 T 14-10-2018 IPR004013 PHP domain GO:0003824 AMIS_78670 01b4a26ec6149db2a570dfb82d3cbb47 352 Gene3D G3DSA:1.10.150.110 4 84 8.3E-8 T 14-10-2018 IPR027421 DNA polymerase lambda lyase domain superfamily AMIS_78670 01b4a26ec6149db2a570dfb82d3cbb47 352 SUPERFAMILY SSF89550 103 344 2.09E-50 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AMIS_72010 72a00977952e90c6dd18e4768f444da5 429 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 11 423 49.696 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AMIS_72010 72a00977952e90c6dd18e4768f444da5 429 PIRSF PIRSF000412 7 426 2.1E-160 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AMIS_72010 72a00977952e90c6dd18e4768f444da5 429 Pfam PF00464 Serine hydroxymethyltransferase 13 388 1.0E-149 T 14-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AMIS_72010 72a00977952e90c6dd18e4768f444da5 429 Gene3D G3DSA:3.90.1150.10 16 390 8.0E-165 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMIS_72010 72a00977952e90c6dd18e4768f444da5 429 Gene3D G3DSA:3.40.640.10 41 291 8.0E-165 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_72010 72a00977952e90c6dd18e4768f444da5 429 SUPERFAMILY SSF53383 11 422 2.92E-159 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_28620 6593b27f0e4d62b71db08e356dce88f8 219 Gene3D G3DSA:1.10.10.60 1 76 1.2E-25 T 14-10-2018 AMIS_28620 6593b27f0e4d62b71db08e356dce88f8 219 SUPERFAMILY SSF48498 87 216 4.23E-15 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_28620 6593b27f0e4d62b71db08e356dce88f8 219 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 83 216 2.3E-12 T 14-10-2018 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 AMIS_28620 6593b27f0e4d62b71db08e356dce88f8 219 SUPERFAMILY SSF46689 16 77 1.65E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_28620 6593b27f0e4d62b71db08e356dce88f8 219 Pfam PF00440 Bacterial regulatory proteins, tetR family 28 70 2.5E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_28620 6593b27f0e4d62b71db08e356dce88f8 219 Gene3D G3DSA:1.10.357.10 78 218 9.0E-21 T 14-10-2018 AMIS_79300 05242d2339fab42fe19fcf89f488e617 137 SUPERFAMILY SSF54909 1 96 2.41E-17 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel AMIS_79300 05242d2339fab42fe19fcf89f488e617 137 SMART SM00886 2 93 3.1E-12 T 14-10-2018 IPR013097 Stress responsive alpha-beta barrel AMIS_79300 05242d2339fab42fe19fcf89f488e617 137 Pfam PF07876 Stress responsive A/B Barrel Domain 2 91 1.0E-12 T 14-10-2018 IPR013097 Stress responsive alpha-beta barrel AMIS_79300 05242d2339fab42fe19fcf89f488e617 137 Gene3D G3DSA:3.30.70.100 2 92 8.1E-10 T 14-10-2018 AMIS_57120 f74e6878844338d7c5ff607357f63011 336 Pfam PF00296 Luciferase-like monooxygenase 10 303 4.9E-57 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMIS_57120 f74e6878844338d7c5ff607357f63011 336 SUPERFAMILY SSF51679 6 325 9.55E-55 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_57120 f74e6878844338d7c5ff607357f63011 336 Gene3D G3DSA:3.20.20.30 3 324 1.3E-68 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_6660 e4aadca16aff7bf6601f5b517db18604 373 SUPERFAMILY SSF51419 8 241 4.07E-58 T 14-10-2018 IPR029066 PLP-binding barrel AMIS_6660 e4aadca16aff7bf6601f5b517db18604 373 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 30 40 - T 14-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMIS_6660 e4aadca16aff7bf6601f5b517db18604 373 PRINTS PR00992 Alanine racemase signature 256 271 2.8E-62 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMIS_6660 e4aadca16aff7bf6601f5b517db18604 373 PRINTS PR00992 Alanine racemase signature 122 134 2.8E-62 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMIS_6660 e4aadca16aff7bf6601f5b517db18604 373 PRINTS PR00992 Alanine racemase signature 159 170 2.8E-62 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMIS_6660 e4aadca16aff7bf6601f5b517db18604 373 PRINTS PR00992 Alanine racemase signature 61 79 2.8E-62 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMIS_6660 e4aadca16aff7bf6601f5b517db18604 373 PRINTS PR00992 Alanine racemase signature 273 288 2.8E-62 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMIS_6660 e4aadca16aff7bf6601f5b517db18604 373 PRINTS PR00992 Alanine racemase signature 25 41 2.8E-62 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMIS_6660 e4aadca16aff7bf6601f5b517db18604 373 PRINTS PR00992 Alanine racemase signature 294 311 2.8E-62 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMIS_6660 e4aadca16aff7bf6601f5b517db18604 373 PRINTS PR00992 Alanine racemase signature 349 362 2.8E-62 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMIS_6660 e4aadca16aff7bf6601f5b517db18604 373 PRINTS PR00992 Alanine racemase signature 202 229 2.8E-62 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMIS_6660 e4aadca16aff7bf6601f5b517db18604 373 Pfam PF00842 Alanine racemase, C-terminal domain 240 367 1.8E-43 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMIS_6660 e4aadca16aff7bf6601f5b517db18604 373 TIGRFAM TIGR00492 alr: alanine racemase 4 367 1.8E-88 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMIS_6660 e4aadca16aff7bf6601f5b517db18604 373 Gene3D G3DSA:2.40.37.10 8 367 1.5E-126 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AMIS_6660 e4aadca16aff7bf6601f5b517db18604 373 Hamap MF_01201 Alanine racemase. 1 368 32.608 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMIS_6660 e4aadca16aff7bf6601f5b517db18604 373 SMART SM01005 240 368 1.9E-62 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMIS_6660 e4aadca16aff7bf6601f5b517db18604 373 Gene3D G3DSA:3.20.20.10 10 224 1.5E-126 T 14-10-2018 IPR029066 PLP-binding barrel AMIS_6660 e4aadca16aff7bf6601f5b517db18604 373 SUPERFAMILY SSF50621 233 368 2.23E-47 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AMIS_6660 e4aadca16aff7bf6601f5b517db18604 373 Pfam PF01168 Alanine racemase, N-terminal domain 8 229 1.1E-61 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMIS_71010 08ecc13e6ea7fbbcda6ae972308fe831 221 Pfam PF00753 Metallo-beta-lactamase superfamily 32 172 3.1E-19 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMIS_71010 08ecc13e6ea7fbbcda6ae972308fe831 221 Gene3D G3DSA:3.60.15.10 12 218 4.4E-41 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMIS_71010 08ecc13e6ea7fbbcda6ae972308fe831 221 SMART SM00849 30 214 8.2E-14 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMIS_71010 08ecc13e6ea7fbbcda6ae972308fe831 221 SUPERFAMILY SSF56281 3 217 4.82E-27 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMIS_49100 1e19d13174d5f49ddf897dced5c8fae7 1397 Gene3D G3DSA:3.40.50.300 595 869 4.8E-83 T 14-10-2018 AMIS_49100 1e19d13174d5f49ddf897dced5c8fae7 1397 Pfam PF01580 FtsK/SpoIIIE family 614 829 6.5E-31 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 AMIS_49100 1e19d13174d5f49ddf897dced5c8fae7 1397 Pfam PF01580 FtsK/SpoIIIE family 954 1043 3.1E-15 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 AMIS_49100 1e19d13174d5f49ddf897dced5c8fae7 1397 SUPERFAMILY SSF52540 624 851 8.21E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_49100 1e19d13174d5f49ddf897dced5c8fae7 1397 Gene3D G3DSA:2.60.200.20 85 188 3.5E-21 T 14-10-2018 AMIS_49100 1e19d13174d5f49ddf897dced5c8fae7 1397 Gene3D G3DSA:3.40.50.300 350 473 2.6E-5 T 14-10-2018 AMIS_49100 1e19d13174d5f49ddf897dced5c8fae7 1397 Gene3D G3DSA:3.40.50.300 913 1194 9.3E-44 T 14-10-2018 AMIS_49100 1e19d13174d5f49ddf897dced5c8fae7 1397 SMART SM00382 644 822 5.4E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_49100 1e19d13174d5f49ddf897dced5c8fae7 1397 SMART SM00382 1223 1378 0.0054 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_49100 1e19d13174d5f49ddf897dced5c8fae7 1397 SMART SM00382 961 1120 1.0 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_49100 1e19d13174d5f49ddf897dced5c8fae7 1397 SUPERFAMILY SSF52540 918 1148 9.06E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_49100 1e19d13174d5f49ddf897dced5c8fae7 1397 SUPERFAMILY SSF52540 1194 1307 3.71E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_49100 1e19d13174d5f49ddf897dced5c8fae7 1397 Pfam PF16697 Inner membrane component of T3SS, cytoplasmic domain 93 179 5.4E-17 T 14-10-2018 IPR032030 YscD, cytoplasmic domain AMIS_49100 1e19d13174d5f49ddf897dced5c8fae7 1397 Gene3D G3DSA:3.40.50.300 1195 1289 6.2E-8 T 14-10-2018 AMIS_49100 1e19d13174d5f49ddf897dced5c8fae7 1397 SUPERFAMILY SSF49879 84 177 7.27E-20 T 14-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 AMIS_49100 1e19d13174d5f49ddf897dced5c8fae7 1397 SMART SM00240 106 156 2.7E-7 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 AMIS_37510 cf8ad3adda7214f2d5132c3d7747eac5 349 Gene3D G3DSA:3.40.50.2300 151 349 3.8E-103 T 14-10-2018 AMIS_37510 cf8ad3adda7214f2d5132c3d7747eac5 349 SUPERFAMILY SSF53822 46 348 2.02E-62 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_37510 cf8ad3adda7214f2d5132c3d7747eac5 349 Gene3D G3DSA:3.40.50.2300 49 333 3.8E-103 T 14-10-2018 AMIS_37510 cf8ad3adda7214f2d5132c3d7747eac5 349 Pfam PF13407 Periplasmic binding protein domain 50 307 3.4E-50 T 14-10-2018 IPR025997 Periplasmic binding protein AMIS_75500 242219e679a95e67892ff9edd10cd538 269 Gene3D G3DSA:3.40.50.720 16 267 1.3E-70 T 14-10-2018 AMIS_75500 242219e679a95e67892ff9edd10cd538 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 175 194 3.1E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_75500 242219e679a95e67892ff9edd10cd538 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 162 3.1E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_75500 242219e679a95e67892ff9edd10cd538 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 95 106 3.1E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_75500 242219e679a95e67892ff9edd10cd538 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 95 106 3.2E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_75500 242219e679a95e67892ff9edd10cd538 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 196 213 3.2E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_75500 242219e679a95e67892ff9edd10cd538 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 225 245 3.2E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_75500 242219e679a95e67892ff9edd10cd538 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 25 42 3.2E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_75500 242219e679a95e67892ff9edd10cd538 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 164 3.2E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_75500 242219e679a95e67892ff9edd10cd538 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 194 3.2E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_75500 242219e679a95e67892ff9edd10cd538 269 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 32 260 5.7E-56 T 14-10-2018 AMIS_75500 242219e679a95e67892ff9edd10cd538 269 SUPERFAMILY SSF51735 22 263 4.21E-70 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_7970 f213521f60a26556c1cc0df244b54989 221 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 49 204 5.5E-67 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AMIS_7970 f213521f60a26556c1cc0df244b54989 221 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 47 210 37.078 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AMIS_7970 f213521f60a26556c1cc0df244b54989 221 Pfam PF01625 Peptide methionine sulfoxide reductase 50 205 2.3E-68 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AMIS_7970 f213521f60a26556c1cc0df244b54989 221 Gene3D G3DSA:3.30.1060.10 8 219 4.1E-94 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AMIS_7970 f213521f60a26556c1cc0df244b54989 221 SUPERFAMILY SSF55068 8 214 5.36E-80 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AMIS_16250 6c57151e28355d3fb9fc1fec795ddb2a 238 SUPERFAMILY SSF46785 9 207 1.57E-29 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_16250 6c57151e28355d3fb9fc1fec795ddb2a 238 Gene3D G3DSA:1.10.10.10 9 133 1.2E-10 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_16250 6c57151e28355d3fb9fc1fec795ddb2a 238 Pfam PF01022 Bacterial regulatory protein, arsR family 30 66 1.1E-4 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_72150 3593bfc2ba5174028ac09a2c808e7ef8 389 Gene3D G3DSA:3.90.440.10 96 206 5.3E-143 T 14-10-2018 AMIS_72150 3593bfc2ba5174028ac09a2c808e7ef8 389 ProSitePatterns PS60001 Nitric oxide synthase (NOS) signature. 79 86 - T 14-10-2018 IPR004030 Nitric oxide synthase, N-terminal GO:0004517|GO:0006809|GO:0055114 Reactome: R-HSA-1222556|Reactome: R-HSA-392154 AMIS_72150 3593bfc2ba5174028ac09a2c808e7ef8 389 PIRSF PIRSF037219 17 380 1.6E-155 T 14-10-2018 IPR017142 Nitric oxide synthase, oxygenase subunit GO:0004517|GO:0006809|GO:0020037 KEGG: 00220+1.14.14.47|KEGG: 00330+1.14.14.47 AMIS_72150 3593bfc2ba5174028ac09a2c808e7ef8 389 SUPERFAMILY SSF56512 24 375 5.1E-151 T 14-10-2018 IPR036119 Nitric oxide synthase, N-terminal domain superfamily GO:0004517|GO:0006809|GO:0055114 Reactome: R-HSA-1222556|Reactome: R-HSA-392154 AMIS_72150 3593bfc2ba5174028ac09a2c808e7ef8 389 Gene3D G3DSA:3.90.1230.10 207 313 5.3E-143 T 14-10-2018 AMIS_72150 3593bfc2ba5174028ac09a2c808e7ef8 389 Pfam PF02898 Nitric oxide synthase, oxygenase domain 24 374 2.0E-146 T 14-10-2018 IPR004030 Nitric oxide synthase, N-terminal GO:0004517|GO:0006809|GO:0055114 Reactome: R-HSA-1222556|Reactome: R-HSA-392154 AMIS_72150 3593bfc2ba5174028ac09a2c808e7ef8 389 Gene3D G3DSA:3.90.340.10 24 368 5.3E-143 T 14-10-2018 AMIS_59080 4e0707635e59a539123e4a191091e31f 331 TIGRFAM TIGR00476 selD: selenide, water dikinase 4 309 1.6E-117 T 14-10-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 AMIS_59080 4e0707635e59a539123e4a191091e31f 331 Pfam PF00586 AIR synthase related protein, N-terminal domain 50 156 5.3E-18 T 14-10-2018 IPR016188 PurM-like, N-terminal domain AMIS_59080 4e0707635e59a539123e4a191091e31f 331 Hamap MF_00625 Selenide, water dikinase [selD]. 2 331 37.296 T 14-10-2018 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 AMIS_59080 4e0707635e59a539123e4a191091e31f 331 PIRSF PIRSF036407 1 310 3.0E-101 T 14-10-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 AMIS_59080 4e0707635e59a539123e4a191091e31f 331 SUPERFAMILY SSF55326 4 160 1.33E-38 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AMIS_59080 4e0707635e59a539123e4a191091e31f 331 Gene3D G3DSA:3.30.1330.10 1 162 1.6E-49 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AMIS_59080 4e0707635e59a539123e4a191091e31f 331 Gene3D G3DSA:3.90.650.10 164 312 7.5E-41 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AMIS_59080 4e0707635e59a539123e4a191091e31f 331 SUPERFAMILY SSF56042 164 310 2.99E-35 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AMIS_59080 4e0707635e59a539123e4a191091e31f 331 Pfam PF02769 AIR synthase related protein, C-terminal domain 169 307 1.0E-17 T 14-10-2018 IPR010918 PurM-like, C-terminal domain AMIS_57700 ada767aa7cc4bd8d043d6be00399cfe8 185 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 15 169 2.5E-19 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_57700 ada767aa7cc4bd8d043d6be00399cfe8 185 Gene3D G3DSA:1.10.10.10 87 176 2.2E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_57700 ada767aa7cc4bd8d043d6be00399cfe8 185 SUPERFAMILY SSF88659 108 169 6.54E-12 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_57700 ada767aa7cc4bd8d043d6be00399cfe8 185 Gene3D G3DSA:1.10.1740.10 12 86 4.0E-11 T 14-10-2018 AMIS_57700 ada767aa7cc4bd8d043d6be00399cfe8 185 Pfam PF04542 Sigma-70 region 2 23 82 1.1E-6 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_57700 ada767aa7cc4bd8d043d6be00399cfe8 185 SUPERFAMILY SSF88946 15 81 5.49E-13 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_57700 ada767aa7cc4bd8d043d6be00399cfe8 185 Pfam PF08281 Sigma-70, region 4 117 168 3.5E-10 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_27580 a1abd81ff803cc318aa264b7681d013c 593 Gene3D G3DSA:3.40.50.1820 494 593 6.7E-16 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_27580 a1abd81ff803cc318aa264b7681d013c 593 Gene3D G3DSA:3.40.50.1820 222 460 1.9E-58 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_27580 a1abd81ff803cc318aa264b7681d013c 593 Pfam PF03729 Short repeat of unknown function (DUF308) 18 66 0.0019 T 14-10-2018 IPR005325 Protein of unknown function DUF308, membrane AMIS_27580 a1abd81ff803cc318aa264b7681d013c 593 Pfam PF03729 Short repeat of unknown function (DUF308) 71 138 0.018 T 14-10-2018 IPR005325 Protein of unknown function DUF308, membrane AMIS_27580 a1abd81ff803cc318aa264b7681d013c 593 Pfam PF03729 Short repeat of unknown function (DUF308) 128 177 9.3E-4 T 14-10-2018 IPR005325 Protein of unknown function DUF308, membrane AMIS_27580 a1abd81ff803cc318aa264b7681d013c 593 Pfam PF03583 Secretory lipase 323 589 5.4E-23 T 14-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 AMIS_27580 a1abd81ff803cc318aa264b7681d013c 593 SUPERFAMILY SSF53474 258 585 5.6E-25 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_33470 fe94c90c2b1d698a563457248291b5ab 910 Gene3D G3DSA:2.120.10.30 462 730 4.0E-13 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AMIS_33470 fe94c90c2b1d698a563457248291b5ab 910 Gene3D G3DSA:2.60.120.430 202 371 7.1E-13 T 14-10-2018 AMIS_33470 fe94c90c2b1d698a563457248291b5ab 910 Gene3D G3DSA:2.60.120.430 28 201 3.0E-11 T 14-10-2018 AMIS_33470 fe94c90c2b1d698a563457248291b5ab 910 Pfam PF13205 Bacterial Ig-like domain 375 479 2.1E-11 T 14-10-2018 IPR032812 SbsA, Ig-like domain AMIS_33470 fe94c90c2b1d698a563457248291b5ab 910 SUPERFAMILY SSF50952 506 908 4.45E-16 T 14-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 AMIS_33470 fe94c90c2b1d698a563457248291b5ab 910 SUPERFAMILY SSF49785 207 369 9.35E-25 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_33470 fe94c90c2b1d698a563457248291b5ab 910 SUPERFAMILY SSF49785 38 198 4.42E-24 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_1450 9ef4292ca24a2deadfa93cb5897599f2 189 SUPERFAMILY SSF55811 9 174 1.62E-37 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMIS_1450 9ef4292ca24a2deadfa93cb5897599f2 189 Hamap MF_00202 Isopentenyl-diphosphate Delta-isomerase [idi]. 7 182 29.818 T 14-10-2018 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: R-HSA-191273 AMIS_1450 9ef4292ca24a2deadfa93cb5897599f2 189 TIGRFAM TIGR02150 IPP_isom_1: isopentenyl-diphosphate delta-isomerase 11 167 2.7E-33 T 14-10-2018 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: R-HSA-191273 AMIS_1450 9ef4292ca24a2deadfa93cb5897599f2 189 PIRSF PIRSF018427 1 184 8.0E-45 T 14-10-2018 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: R-HSA-191273 AMIS_1450 9ef4292ca24a2deadfa93cb5897599f2 189 Pfam PF00293 NUDIX domain 34 167 4.8E-18 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMIS_1450 9ef4292ca24a2deadfa93cb5897599f2 189 Gene3D G3DSA:3.90.79.10 2 185 8.7E-43 T 14-10-2018 AMIS_76590 5c2a3ac6a12c0cd9c62e1fa694ec5d6b 205 Pfam PF00188 Cysteine-rich secretory protein family 88 202 2.7E-17 T 14-10-2018 IPR014044 CAP domain AMIS_76590 5c2a3ac6a12c0cd9c62e1fa694ec5d6b 205 SUPERFAMILY SSF55797 82 203 1.36E-21 T 14-10-2018 IPR035940 CAP superfamily AMIS_76590 5c2a3ac6a12c0cd9c62e1fa694ec5d6b 205 Gene3D G3DSA:3.40.33.10 39 203 1.5E-41 T 14-10-2018 IPR035940 CAP superfamily AMIS_77070 8f8f662d7c27c7e38c906177337b31bc 172 Gene3D G3DSA:3.40.630.30 4 159 4.4E-21 T 14-10-2018 AMIS_77070 8f8f662d7c27c7e38c906177337b31bc 172 SUPERFAMILY SSF55729 4 153 1.32E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_77070 8f8f662d7c27c7e38c906177337b31bc 172 Pfam PF00583 Acetyltransferase (GNAT) family 65 148 6.4E-12 T 14-10-2018 IPR000182 GNAT domain AMIS_5760 d111c9cdde5826f167db59c3789f6776 166 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 13 154 4.8E-21 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_5760 d111c9cdde5826f167db59c3789f6776 166 Pfam PF04542 Sigma-70 region 2 13 76 4.7E-12 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_5760 d111c9cdde5826f167db59c3789f6776 166 Pfam PF08281 Sigma-70, region 4 100 151 2.9E-13 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_5760 d111c9cdde5826f167db59c3789f6776 166 TIGRFAM TIGR02983 SigE-fam_strep: RNA polymerase sigma-70 factor, sigma-E family 2 155 2.9E-46 T 14-10-2018 IPR014325 RNA polymerase sigma-E factor, actinobacteria GO:0016987 AMIS_5760 d111c9cdde5826f167db59c3789f6776 166 SUPERFAMILY SSF88659 95 156 2.24E-14 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_5760 d111c9cdde5826f167db59c3789f6776 166 Gene3D G3DSA:1.10.10.10 93 160 9.9E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_5760 d111c9cdde5826f167db59c3789f6776 166 SUPERFAMILY SSF88946 9 85 4.32E-14 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_5760 d111c9cdde5826f167db59c3789f6776 166 Gene3D G3DSA:1.10.1740.10 1 74 4.2E-12 T 14-10-2018 AMIS_25310 f139b05aa3dd7f1806f6a29844837771 201 SUPERFAMILY SSF48498 79 194 5.04E-18 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_25310 f139b05aa3dd7f1806f6a29844837771 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 3.7E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_25310 f139b05aa3dd7f1806f6a29844837771 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 3.7E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_25310 f139b05aa3dd7f1806f6a29844837771 201 SUPERFAMILY SSF46689 4 82 1.59E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_25310 f139b05aa3dd7f1806f6a29844837771 201 Pfam PF16925 Bacterial transcriptional repressor C-terminal 84 190 1.3E-11 T 14-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AMIS_25310 f139b05aa3dd7f1806f6a29844837771 201 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 57 1.1E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_25310 f139b05aa3dd7f1806f6a29844837771 201 Gene3D G3DSA:1.10.357.10 2 200 6.0E-50 T 14-10-2018 AMIS_22200 779b721ad134d19373e6d9a7f75bd408 599 SUPERFAMILY SSF48208 201 584 4.68E-102 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AMIS_22200 779b721ad134d19373e6d9a7f75bd408 599 Pfam PF00723 Glycosyl hydrolases family 15 216 580 5.1E-63 T 14-10-2018 IPR011613 GH15-like domain Reactome: R-HSA-70221 AMIS_22200 779b721ad134d19373e6d9a7f75bd408 599 Gene3D G3DSA:1.50.10.10 216 595 1.5E-87 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 AMIS_5580 49e46de31a7cde905f219028dc4ca0ab 309 SUPERFAMILY SSF54782 223 307 1.44E-18 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMIS_5580 49e46de31a7cde905f219028dc4ca0ab 309 Gene3D G3DSA:3.30.160.40 223 307 5.6E-22 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMIS_5580 49e46de31a7cde905f219028dc4ca0ab 309 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 7 213 6.5E-62 T 14-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMIS_5580 49e46de31a7cde905f219028dc4ca0ab 309 SUPERFAMILY SSF53850 6 218 3.8E-64 T 14-10-2018 AMIS_5580 49e46de31a7cde905f219028dc4ca0ab 309 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 6 298 32.754 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMIS_5580 49e46de31a7cde905f219028dc4ca0ab 309 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 229 296 5.6E-10 T 14-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMIS_5580 49e46de31a7cde905f219028dc4ca0ab 309 Gene3D G3DSA:3.40.190.10 105 204 4.1E-69 T 14-10-2018 AMIS_5580 49e46de31a7cde905f219028dc4ca0ab 309 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 7 298 1.7E-92 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMIS_5580 49e46de31a7cde905f219028dc4ca0ab 309 PRINTS PR00151 Porphobilinogen deaminase signature 76 95 1.7E-26 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMIS_5580 49e46de31a7cde905f219028dc4ca0ab 309 PRINTS PR00151 Porphobilinogen deaminase signature 126 143 1.7E-26 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMIS_5580 49e46de31a7cde905f219028dc4ca0ab 309 PRINTS PR00151 Porphobilinogen deaminase signature 145 162 1.7E-26 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMIS_5580 49e46de31a7cde905f219028dc4ca0ab 309 PRINTS PR00151 Porphobilinogen deaminase signature 232 249 1.7E-26 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMIS_5580 49e46de31a7cde905f219028dc4ca0ab 309 PRINTS PR00151 Porphobilinogen deaminase signature 45 65 1.7E-26 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMIS_5580 49e46de31a7cde905f219028dc4ca0ab 309 PIRSF PIRSF001438 1 309 1.1E-96 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMIS_5580 49e46de31a7cde905f219028dc4ca0ab 309 Gene3D G3DSA:3.40.190.10 7 212 4.1E-69 T 14-10-2018 AMIS_5580 49e46de31a7cde905f219028dc4ca0ab 309 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 233 249 - T 14-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMIS_29170 733d47735d3cf46e5eb80241cc48a253 224 Pfam PF07238 PilZ domain 104 212 1.1E-7 T 14-10-2018 IPR009875 PilZ domain GO:0035438 AMIS_29170 733d47735d3cf46e5eb80241cc48a253 224 SUPERFAMILY SSF141371 103 209 2.75E-8 T 14-10-2018 AMIS_29170 733d47735d3cf46e5eb80241cc48a253 224 Gene3D G3DSA:2.40.10.220 100 220 3.8E-9 T 14-10-2018 AMIS_22160 20a2d8adedf2c745086ec7e942872c7c 235 Gene3D G3DSA:3.60.110.10 3 234 3.2E-33 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AMIS_22160 20a2d8adedf2c745086ec7e942872c7c 235 Pfam PF00795 Carbon-nitrogen hydrolase 10 234 4.2E-16 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 AMIS_22160 20a2d8adedf2c745086ec7e942872c7c 235 SUPERFAMILY SSF56317 9 233 7.33E-34 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AMIS_48830 a230499674b47216ad484c6417d38259 320 Pfam PF00398 Ribosomal RNA adenine dimethylase 73 318 2.1E-43 T 14-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm AMIS_48830 a230499674b47216ad484c6417d38259 320 Gene3D G3DSA:3.40.50.150 59 249 2.1E-36 T 14-10-2018 AMIS_48830 a230499674b47216ad484c6417d38259 320 SUPERFAMILY SSF53335 71 318 9.58E-41 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_48830 a230499674b47216ad484c6417d38259 320 SMART SM00650 88 248 9.2E-63 T 14-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 AMIS_48830 a230499674b47216ad484c6417d38259 320 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 104 131 - T 14-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 AMIS_13610 f9b45bccd97aa5755f3f5c5ab9180c08 468 Pfam PF09594 Glycosyltransferase family 87 142 375 3.7E-6 T 14-10-2018 IPR018584 Glycosyltransferase family 87 GO:0016758 AMIS_25750 9db03051625c4f7db2232ad316957bd4 257 SUPERFAMILY SSF53474 24 250 2.47E-33 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_25750 9db03051625c4f7db2232ad316957bd4 257 Gene3D G3DSA:3.40.50.1820 21 254 2.4E-45 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_25750 9db03051625c4f7db2232ad316957bd4 257 Pfam PF12697 Alpha/beta hydrolase family 25 246 8.9E-19 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_70760 21ce7348abda0f7ff476c6a69d6c497e 725 SMART SM00487 266 468 2.7E-26 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMIS_70760 21ce7348abda0f7ff476c6a69d6c497e 725 Gene3D G3DSA:3.40.50.300 474 654 8.5E-52 T 14-10-2018 AMIS_70760 21ce7348abda0f7ff476c6a69d6c497e 725 Pfam PF17191 RecG wedge domain 10 175 7.7E-11 T 14-10-2018 IPR033454 RecG, wedge domain AMIS_70760 21ce7348abda0f7ff476c6a69d6c497e 725 Gene3D G3DSA:3.40.50.300 209 459 2.0E-81 T 14-10-2018 AMIS_70760 21ce7348abda0f7ff476c6a69d6c497e 725 Pfam PF00271 Helicase conserved C-terminal domain 534 612 1.9E-18 T 14-10-2018 IPR001650 Helicase, C-terminal AMIS_70760 21ce7348abda0f7ff476c6a69d6c497e 725 SUPERFAMILY SSF50249 8 182 6.85E-25 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMIS_70760 21ce7348abda0f7ff476c6a69d6c497e 725 SUPERFAMILY SSF52540 188 461 1.21E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_70760 21ce7348abda0f7ff476c6a69d6c497e 725 SMART SM00490 528 613 3.0E-20 T 14-10-2018 IPR001650 Helicase, C-terminal AMIS_70760 21ce7348abda0f7ff476c6a69d6c497e 725 Gene3D G3DSA:2.40.50.140 43 141 1.7E-16 T 14-10-2018 AMIS_70760 21ce7348abda0f7ff476c6a69d6c497e 725 Pfam PF00270 DEAD/DEAH box helicase 293 444 3.2E-15 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMIS_70760 21ce7348abda0f7ff476c6a69d6c497e 725 SUPERFAMILY SSF52540 400 622 1.09E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_4850 e09951e5e9c5307e9ff11e919b13d288 479 Gene3D G3DSA:1.20.1250.20 11 466 2.7E-76 T 14-10-2018 AMIS_4850 e09951e5e9c5307e9ff11e919b13d288 479 SUPERFAMILY SSF103473 5 463 6.8E-69 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_4850 e09951e5e9c5307e9ff11e919b13d288 479 Pfam PF00083 Sugar (and other) transporter 45 465 3.8E-49 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AMIS_51980 08fd87bfa76b8121b3470251ecd8cf14 548 Pfam PF02638 Glycosyl hydrolase-like 10 85 402 9.7E-84 T 14-10-2018 IPR003790 Glycosyl hydrolase-like 10 AMIS_51980 08fd87bfa76b8121b3470251ecd8cf14 548 Gene3D G3DSA:3.20.20.70 138 308 1.1E-7 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_51980 08fd87bfa76b8121b3470251ecd8cf14 548 SUPERFAMILY SSF51445 140 377 1.02E-19 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_18020 604751924bf2ef6ee9c31d15fb5a9eaa 447 SUPERFAMILY SSF111331 130 414 5.89E-47 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily AMIS_18020 604751924bf2ef6ee9c31d15fb5a9eaa 447 Pfam PF00781 Diacylglycerol kinase catalytic domain 134 251 5.3E-17 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 AMIS_18020 604751924bf2ef6ee9c31d15fb5a9eaa 447 Gene3D G3DSA:3.40.50.10330 129 256 1.4E-18 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 AMIS_18020 604751924bf2ef6ee9c31d15fb5a9eaa 447 Gene3D G3DSA:2.60.200.40 257 403 2.0E-10 T 14-10-2018 AMIS_1620 565c26e390a57df02a8a105fdb6c1e05 209 Gene3D G3DSA:1.10.3300.10 17 191 1.1E-14 T 14-10-2018 IPR023286 ABATE domain superfamily AMIS_1620 565c26e390a57df02a8a105fdb6c1e05 209 Pfam PF11706 CGNR zinc finger 147 190 4.0E-14 T 14-10-2018 IPR021005 Zinc finger, CGNR AMIS_1620 565c26e390a57df02a8a105fdb6c1e05 209 SUPERFAMILY SSF160904 17 189 1.18E-24 T 14-10-2018 AMIS_42580 908bd0b0fdf7143454e28343e31193c7 267 Gene3D G3DSA:3.60.10.10 1 267 7.6E-28 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AMIS_42580 908bd0b0fdf7143454e28343e31193c7 267 SUPERFAMILY SSF56219 1 267 2.76E-24 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AMIS_42580 908bd0b0fdf7143454e28343e31193c7 267 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 7 242 3.8E-8 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase AMIS_67600 392a57b45ae8e930a7858e8b68807ce6 313 TIGRFAM TIGR02778 ligD_pol: DNA ligase D, polymerase domain 15 261 1.2E-70 T 14-10-2018 IPR014145 DNA ligase D, polymerase domain AMIS_67600 392a57b45ae8e930a7858e8b68807ce6 313 Pfam PF01896 DNA primase small subunit 136 258 2.1E-7 T 14-10-2018 IPR002755 DNA primase, small subunit GO:0003896|GO:0006269 Reactome: R-HSA-113501|Reactome: R-HSA-174411|Reactome: R-HSA-174430|Reactome: R-HSA-68952|Reactome: R-HSA-68962|Reactome: R-HSA-69091|Reactome: R-HSA-69166|Reactome: R-HSA-69183 AMIS_67600 392a57b45ae8e930a7858e8b68807ce6 313 Gene3D G3DSA:3.90.920.30 22 301 1.3E-89 T 14-10-2018 AMIS_42290 3d4ad07f87df369e822d1b934d1a3f9f 395 Pfam PF07730 Histidine kinase 175 239 5.3E-18 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMIS_42290 3d4ad07f87df369e822d1b934d1a3f9f 395 SUPERFAMILY SSF55874 253 394 2.23E-12 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_78340 d877d02b50c1c597df85ac881dfe0da2 174 Pfam PF00156 Phosphoribosyl transferase domain 46 150 2.8E-13 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AMIS_78340 d877d02b50c1c597df85ac881dfe0da2 174 Gene3D G3DSA:3.40.50.2020 2 172 4.7E-43 T 14-10-2018 AMIS_78340 d877d02b50c1c597df85ac881dfe0da2 174 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 16 169 6.1E-32 T 14-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AMIS_78340 d877d02b50c1c597df85ac881dfe0da2 174 SUPERFAMILY SSF53271 15 170 3.8E-34 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like AMIS_78340 d877d02b50c1c597df85ac881dfe0da2 174 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 174 22.392 T 14-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AMIS_9270 6f1a0fd920b37ead3431920d796fb870 129 Pfam PF07883 Cupin domain 30 98 7.6E-15 T 14-10-2018 IPR013096 Cupin 2, conserved barrel AMIS_9270 6f1a0fd920b37ead3431920d796fb870 129 Gene3D G3DSA:2.60.120.10 5 123 5.7E-36 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMIS_9270 6f1a0fd920b37ead3431920d796fb870 129 SUPERFAMILY SSF51182 7 111 4.45E-20 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily AMIS_9700 b5576e2ca31984143f90a60eb36bb3d4 386 Pfam PF06224 Winged helix DNA-binding domain 31 344 5.4E-58 T 14-10-2018 IPR009351 Protein of unknown function DUF1006 AMIS_45900 50254f60f92ff2b96387dd60a58970ea 309 Gene3D G3DSA:3.40.50.1820 12 306 1.4E-57 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_45900 50254f60f92ff2b96387dd60a58970ea 309 Pfam PF07859 alpha/beta hydrolase fold 78 279 2.9E-43 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 AMIS_45900 50254f60f92ff2b96387dd60a58970ea 309 SUPERFAMILY SSF53474 33 305 3.89E-48 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_4860 adc709e6e42b895719285cf7cfc61d57 381 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 16 126 5.4E-19 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AMIS_4860 adc709e6e42b895719285cf7cfc61d57 381 SUPERFAMILY SSF55347 140 301 4.25E-36 T 14-10-2018 AMIS_4860 adc709e6e42b895719285cf7cfc61d57 381 SUPERFAMILY SSF51735 15 167 5.62E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_4860 adc709e6e42b895719285cf7cfc61d57 381 Gene3D G3DSA:3.40.50.720 14 129 1.4E-27 T 14-10-2018 AMIS_4860 adc709e6e42b895719285cf7cfc61d57 381 Gene3D G3DSA:3.30.360.10 135 376 1.3E-59 T 14-10-2018 AMIS_4860 adc709e6e42b895719285cf7cfc61d57 381 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 148 216 1.3E-9 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 AMIS_42640 b60066646839e60df56d6498d8a1bb67 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.2E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_42640 b60066646839e60df56d6498d8a1bb67 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.2E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_42640 b60066646839e60df56d6498d8a1bb67 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.2E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_42640 b60066646839e60df56d6498d8a1bb67 304 SUPERFAMILY SSF53850 88 295 1.14E-33 T 14-10-2018 AMIS_42640 b60066646839e60df56d6498d8a1bb67 304 SUPERFAMILY SSF46785 1 81 1.49E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_42640 b60066646839e60df56d6498d8a1bb67 304 Pfam PF03466 LysR substrate binding domain 87 291 8.4E-37 T 14-10-2018 IPR005119 LysR, substrate-binding AMIS_42640 b60066646839e60df56d6498d8a1bb67 304 Gene3D G3DSA:3.40.190.10 96 286 1.0E-53 T 14-10-2018 AMIS_42640 b60066646839e60df56d6498d8a1bb67 304 Gene3D G3DSA:1.10.10.10 1 83 2.0E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_42640 b60066646839e60df56d6498d8a1bb67 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.0E-24 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_42640 b60066646839e60df56d6498d8a1bb67 304 Gene3D G3DSA:3.40.190.10 165 268 1.0E-53 T 14-10-2018 AMIS_80260 4574963f001ab0831cd94ac4539173b3 345 SMART SM00304 73 125 1.8E-13 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_80260 4574963f001ab0831cd94ac4539173b3 345 SUPERFAMILY SSF158472 76 121 7.06E-11 T 14-10-2018 AMIS_80260 4574963f001ab0831cd94ac4539173b3 345 Gene3D G3DSA:1.10.8.500 75 121 1.7E-8 T 14-10-2018 AMIS_80260 4574963f001ab0831cd94ac4539173b3 345 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 233 342 3.6E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_80260 4574963f001ab0831cd94ac4539173b3 345 Pfam PF00672 HAMP domain 76 120 4.3E-13 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_80260 4574963f001ab0831cd94ac4539173b3 345 SUPERFAMILY SSF55874 180 343 4.98E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_80260 4574963f001ab0831cd94ac4539173b3 345 PRINTS PR00344 Bacterial sensor protein C-terminal signature 302 320 1.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_80260 4574963f001ab0831cd94ac4539173b3 345 PRINTS PR00344 Bacterial sensor protein C-terminal signature 288 298 1.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_80260 4574963f001ab0831cd94ac4539173b3 345 PRINTS PR00344 Bacterial sensor protein C-terminal signature 270 284 1.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_80260 4574963f001ab0831cd94ac4539173b3 345 PRINTS PR00344 Bacterial sensor protein C-terminal signature 327 340 1.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_80260 4574963f001ab0831cd94ac4539173b3 345 Pfam PF00512 His Kinase A (phospho-acceptor) domain 127 190 3.7E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_80260 4574963f001ab0831cd94ac4539173b3 345 Gene3D G3DSA:3.30.565.10 195 343 1.6E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_80260 4574963f001ab0831cd94ac4539173b3 345 SUPERFAMILY SSF47384 109 190 1.77E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_80260 4574963f001ab0831cd94ac4539173b3 345 SMART SM00387 233 343 5.0E-36 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_80260 4574963f001ab0831cd94ac4539173b3 345 SMART SM00388 126 190 7.7E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_80260 4574963f001ab0831cd94ac4539173b3 345 Gene3D G3DSA:1.10.287.130 122 189 2.6E-21 T 14-10-2018 AMIS_76100 0c2d467a89a5c902c0f9c4ce23f4b907 491 Gene3D G3DSA:3.30.450.20 209 271 3.6E-10 T 14-10-2018 AMIS_76100 0c2d467a89a5c902c0f9c4ce23f4b907 491 SMART SM00387 390 490 7.6E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_76100 0c2d467a89a5c902c0f9c4ce23f4b907 491 SMART SM00388 282 350 3.6E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_76100 0c2d467a89a5c902c0f9c4ce23f4b907 491 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 350 2.1E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_76100 0c2d467a89a5c902c0f9c4ce23f4b907 491 SUPERFAMILY SSF47384 267 350 3.92E-12 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_76100 0c2d467a89a5c902c0f9c4ce23f4b907 491 Gene3D G3DSA:3.30.450.20 153 207 5.0E-7 T 14-10-2018 AMIS_76100 0c2d467a89a5c902c0f9c4ce23f4b907 491 Pfam PF13188 PAS domain 162 203 2.1E-8 T 14-10-2018 IPR000014 PAS domain AMIS_76100 0c2d467a89a5c902c0f9c4ce23f4b907 491 Pfam PF13426 PAS domain 215 253 0.0077 T 14-10-2018 IPR000014 PAS domain AMIS_76100 0c2d467a89a5c902c0f9c4ce23f4b907 491 Gene3D G3DSA:1.10.287.130 272 352 7.5E-8 T 14-10-2018 AMIS_76100 0c2d467a89a5c902c0f9c4ce23f4b907 491 SUPERFAMILY SSF55785 171 263 2.44E-14 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_76100 0c2d467a89a5c902c0f9c4ce23f4b907 491 PRINTS PR00344 Bacterial sensor protein C-terminal signature 450 468 9.5E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_76100 0c2d467a89a5c902c0f9c4ce23f4b907 491 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 439 9.5E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_76100 0c2d467a89a5c902c0f9c4ce23f4b907 491 Gene3D G3DSA:3.30.565.10 360 490 8.8E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_76100 0c2d467a89a5c902c0f9c4ce23f4b907 491 SUPERFAMILY SSF55874 339 486 6.02E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_76100 0c2d467a89a5c902c0f9c4ce23f4b907 491 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 391 487 4.0E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_58450 fbe4623fd2f71488fa1191a2dd141fa0 246 SUPERFAMILY SSF51735 7 231 2.58E-69 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_58450 fbe4623fd2f71488fa1191a2dd141fa0 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 229 1.8E-55 T 14-10-2018 AMIS_58450 fbe4623fd2f71488fa1191a2dd141fa0 246 Gene3D G3DSA:3.40.50.720 3 241 2.7E-71 T 14-10-2018 AMIS_58450 fbe4623fd2f71488fa1191a2dd141fa0 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 157 7.3E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_58450 fbe4623fd2f71488fa1191a2dd141fa0 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 68 79 7.3E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_58450 fbe4623fd2f71488fa1191a2dd141fa0 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 176 7.3E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_58450 fbe4623fd2f71488fa1191a2dd141fa0 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 7.3E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_58450 fbe4623fd2f71488fa1191a2dd141fa0 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 113 129 7.3E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_58450 fbe4623fd2f71488fa1191a2dd141fa0 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 192 212 7.3E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_58450 fbe4623fd2f71488fa1191a2dd141fa0 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 157 1.3E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_58450 fbe4623fd2f71488fa1191a2dd141fa0 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 119 127 1.3E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_58450 fbe4623fd2f71488fa1191a2dd141fa0 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 68 79 1.3E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_3710 9ee431bda9c3845ba3deacfdf092a8a7 128 Pfam PF00313 'Cold-shock' DNA-binding domain 3 63 3.0E-13 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMIS_3710 9ee431bda9c3845ba3deacfdf092a8a7 128 Gene3D G3DSA:2.40.50.140 3 66 3.2E-17 T 14-10-2018 AMIS_3710 9ee431bda9c3845ba3deacfdf092a8a7 128 PRINTS PR00050 Cold shock protein signature 24 33 1.6E-9 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMIS_3710 9ee431bda9c3845ba3deacfdf092a8a7 128 PRINTS PR00050 Cold shock protein signature 4 19 1.6E-9 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMIS_3710 9ee431bda9c3845ba3deacfdf092a8a7 128 PRINTS PR00050 Cold shock protein signature 38 56 1.6E-9 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMIS_3710 9ee431bda9c3845ba3deacfdf092a8a7 128 SMART SM00357 3 65 5.9E-18 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 AMIS_3710 9ee431bda9c3845ba3deacfdf092a8a7 128 SUPERFAMILY SSF50249 2 67 1.05E-14 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMIS_36650 ec205d05af74000c884dcb41617a843e 384 Gene3D G3DSA:3.30.9.10 73 379 3.3E-152 T 14-10-2018 AMIS_36650 ec205d05af74000c884dcb41617a843e 384 SUPERFAMILY SSF54373 168 269 4.32E-36 T 14-10-2018 AMIS_36650 ec205d05af74000c884dcb41617a843e 384 Pfam PF01494 FAD binding domain 2 336 2.4E-66 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 AMIS_36650 ec205d05af74000c884dcb41617a843e 384 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 146 161 3.6E-25 T 14-10-2018 AMIS_36650 ec205d05af74000c884dcb41617a843e 384 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 3.6E-25 T 14-10-2018 AMIS_36650 ec205d05af74000c884dcb41617a843e 384 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 287 303 3.6E-25 T 14-10-2018 AMIS_36650 ec205d05af74000c884dcb41617a843e 384 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 272 287 3.6E-25 T 14-10-2018 AMIS_36650 ec205d05af74000c884dcb41617a843e 384 SUPERFAMILY SSF51905 1 381 1.15E-50 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_36650 ec205d05af74000c884dcb41617a843e 384 Gene3D G3DSA:3.50.50.60 2 345 3.3E-152 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_27520 0d4f124e42761c007bc52df48952ab97 226 Gene3D G3DSA:1.10.443.10 13 182 7.0E-19 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AMIS_27520 0d4f124e42761c007bc52df48952ab97 226 SUPERFAMILY SSF56349 19 171 2.41E-21 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMIS_27520 0d4f124e42761c007bc52df48952ab97 226 Pfam PF00589 Phage integrase family 22 162 7.0E-14 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMIS_46110 df786ad4c4548bc70b8b8944650947f9 144 SMART SM00347 32 134 4.0E-17 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_46110 df786ad4c4548bc70b8b8944650947f9 144 SUPERFAMILY SSF46785 9 143 2.41E-26 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_46110 df786ad4c4548bc70b8b8944650947f9 144 Pfam PF01047 MarR family 39 98 6.3E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_46110 df786ad4c4548bc70b8b8944650947f9 144 Gene3D G3DSA:1.10.10.10 9 144 6.3E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_46110 df786ad4c4548bc70b8b8944650947f9 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 75 90 4.5E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_46110 df786ad4c4548bc70b8b8944650947f9 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 94 110 4.5E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_64180 eb2bed5e57bb3f9fa7724b9d6dec72fb 380 SMART SM00331 163 378 2.3E-9 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_64180 eb2bed5e57bb3f9fa7724b9d6dec72fb 380 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 189 378 9.5E-30 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_64180 eb2bed5e57bb3f9fa7724b9d6dec72fb 380 SUPERFAMILY SSF81606 178 324 1.14E-9 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_64180 eb2bed5e57bb3f9fa7724b9d6dec72fb 380 Gene3D G3DSA:3.60.40.10 164 380 4.0E-36 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_2080 c31dde8538e8eaaf7df381e029e669bf 309 SUPERFAMILY SSF53807 44 303 2.39E-56 T 14-10-2018 AMIS_2080 c31dde8538e8eaaf7df381e029e669bf 309 Gene3D G3DSA:3.40.50.1980 170 306 6.6E-35 T 14-10-2018 AMIS_2080 c31dde8538e8eaaf7df381e029e669bf 309 Gene3D G3DSA:3.40.50.1980 43 167 1.6E-28 T 14-10-2018 AMIS_2080 c31dde8538e8eaaf7df381e029e669bf 309 Pfam PF01497 Periplasmic binding protein 56 284 4.3E-33 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain AMIS_40180 30a68044ba44b7c017365f2c6a4032f2 415 Gene3D G3DSA:2.60.40.2180 49 176 1.5E-5 T 14-10-2018 AMIS_40180 30a68044ba44b7c017365f2c6a4032f2 415 Pfam PF10503 Esterase PHB depolymerase 197 331 1.3E-8 T 14-10-2018 IPR010126 Esterase, PHB depolymerase GO:0005576|GO:0016787 AMIS_40180 30a68044ba44b7c017365f2c6a4032f2 415 SUPERFAMILY SSF53474 195 410 2.84E-25 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_40180 30a68044ba44b7c017365f2c6a4032f2 415 Gene3D G3DSA:3.40.50.1820 186 412 1.4E-40 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_9790 4d292ef9d9e6f54db57e394972331a84 408 Gene3D G3DSA:2.60.40.3780 51 148 5.4E-19 T 14-10-2018 AMIS_9790 4d292ef9d9e6f54db57e394972331a84 408 Pfam PF03734 L,D-transpeptidase catalytic domain 260 376 2.6E-18 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 AMIS_9790 4d292ef9d9e6f54db57e394972331a84 408 Gene3D G3DSA:2.40.440.10 254 390 5.7E-88 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like AMIS_9790 4d292ef9d9e6f54db57e394972331a84 408 Gene3D G3DSA:2.60.40.3710 160 402 5.7E-88 T 14-10-2018 AMIS_9790 4d292ef9d9e6f54db57e394972331a84 408 SUPERFAMILY SSF141523 257 376 9.81E-31 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like AMIS_68990 0286ab959c86a7ff1d1510772ae487ef 307 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 15 294 1.1E-74 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 AMIS_68990 0286ab959c86a7ff1d1510772ae487ef 307 SUPERFAMILY SSF52540 16 154 4.02E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_68990 0286ab959c86a7ff1d1510772ae487ef 307 Pfam PF01715 IPP transferase 48 287 6.1E-74 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 AMIS_68990 0286ab959c86a7ff1d1510772ae487ef 307 Gene3D G3DSA:1.10.20.140 122 190 1.1E-87 T 14-10-2018 AMIS_68990 0286ab959c86a7ff1d1510772ae487ef 307 Gene3D G3DSA:3.40.50.300 19 292 1.1E-87 T 14-10-2018 AMIS_68990 0286ab959c86a7ff1d1510772ae487ef 307 SUPERFAMILY SSF52540 14 222 4.61E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_68990 0286ab959c86a7ff1d1510772ae487ef 307 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 15 304 27.216 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 AMIS_64120 15513765b2619e60b62e28a165515546 558 Gene3D G3DSA:1.20.1730.10 34 558 1.3E-114 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily AMIS_64120 15513765b2619e60b62e28a165515546 558 Pfam PF00474 Sodium:solute symporter family 45 454 2.1E-51 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AMIS_64120 15513765b2619e60b62e28a165515546 558 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 45 454 7.6E-79 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AMIS_62270 375220c9b89c54f508b17693170d46a4 392 ProSitePatterns PS00788 Chorismate synthase signature 2. 134 150 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AMIS_62270 375220c9b89c54f508b17693170d46a4 392 PIRSF PIRSF001456 1 384 1.8E-127 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AMIS_62270 375220c9b89c54f508b17693170d46a4 392 ProSitePatterns PS00789 Chorismate synthase signature 3. 341 357 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AMIS_62270 375220c9b89c54f508b17693170d46a4 392 TIGRFAM TIGR00033 aroC: chorismate synthase 2 371 2.7E-130 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AMIS_62270 375220c9b89c54f508b17693170d46a4 392 SUPERFAMILY SSF103263 2 388 1.44E-138 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AMIS_62270 375220c9b89c54f508b17693170d46a4 392 Gene3D G3DSA:3.60.150.10 1 392 3.8E-159 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AMIS_62270 375220c9b89c54f508b17693170d46a4 392 Hamap MF_00300 Chorismate synthase [aroC]. 2 374 35.252 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AMIS_62270 375220c9b89c54f508b17693170d46a4 392 ProSitePatterns PS00787 Chorismate synthase signature 1. 8 23 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AMIS_62270 375220c9b89c54f508b17693170d46a4 392 Pfam PF01264 Chorismate synthase 2 365 2.0E-118 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AMIS_41010 95a0a1c0fd100f0e432f8ecd916644e9 120 Gene3D G3DSA:3.10.180.10 6 120 2.5E-24 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_41010 95a0a1c0fd100f0e432f8ecd916644e9 120 SUPERFAMILY SSF54593 8 119 8.94E-19 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_47910 682706b646f22521caa4dc01edbef251 236 Gene3D G3DSA:3.40.630.30 68 226 7.2E-23 T 14-10-2018 AMIS_47910 682706b646f22521caa4dc01edbef251 236 Pfam PF13508 Acetyltransferase (GNAT) domain 157 214 2.0E-6 T 14-10-2018 IPR000182 GNAT domain AMIS_47910 682706b646f22521caa4dc01edbef251 236 SUPERFAMILY SSF55729 101 228 1.01E-17 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_48030 31385d5adce9f57d855d3154bdebe148 951 Gene3D G3DSA:3.10.170.10 262 485 4.1E-52 T 14-10-2018 AMIS_48030 31385d5adce9f57d855d3154bdebe148 951 Pfam PF02128 Fungalysin metallopeptidase (M36) 280 655 1.0E-79 T 14-10-2018 IPR001842 Peptidase M36, fungalysin GO:0004222|GO:0005615|GO:0008270 AMIS_48030 31385d5adce9f57d855d3154bdebe148 951 SUPERFAMILY SSF55486 321 652 1.15E-37 T 14-10-2018 AMIS_48030 31385d5adce9f57d855d3154bdebe148 951 Gene3D G3DSA:1.10.390.10 486 666 8.9E-39 T 14-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily AMIS_36480 4f90afdd32410b04095b7da75a80f4e7 242 SUPERFAMILY SSF52540 3 211 5.84E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_36480 4f90afdd32410b04095b7da75a80f4e7 242 ProSitePatterns PS00211 ABC transporters family signature. 118 132 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_36480 4f90afdd32410b04095b7da75a80f4e7 242 Pfam PF00005 ABC transporter 4 146 4.8E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_36480 4f90afdd32410b04095b7da75a80f4e7 242 Gene3D G3DSA:3.40.50.300 1 238 1.3E-62 T 14-10-2018 AMIS_36480 4f90afdd32410b04095b7da75a80f4e7 242 SMART SM00382 13 194 4.1E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_79600 b4650608924dac9b9b5ba312313391d6 255 Pfam PF00005 ABC transporter 21 164 7.7E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_79600 b4650608924dac9b9b5ba312313391d6 255 Gene3D G3DSA:3.40.50.300 1 228 5.9E-57 T 14-10-2018 AMIS_79600 b4650608924dac9b9b5ba312313391d6 255 SUPERFAMILY SSF52540 10 217 1.55E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_79600 b4650608924dac9b9b5ba312313391d6 255 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_79600 b4650608924dac9b9b5ba312313391d6 255 SMART SM00382 28 214 3.2E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_22770 b847a669d4839b2655dbe3444d5bba97 152 SUPERFAMILY SSF46785 12 144 1.06E-34 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_22770 b847a669d4839b2655dbe3444d5bba97 152 Gene3D G3DSA:1.10.10.10 11 152 6.8E-41 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_22770 b847a669d4839b2655dbe3444d5bba97 152 Pfam PF01638 HxlR-like helix-turn-helix 26 109 3.5E-17 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type AMIS_78600 2292c825c8e8ed589219bce1f8607f74 160 Gene3D G3DSA:3.40.140.10 1 156 1.7E-51 T 14-10-2018 AMIS_78600 2292c825c8e8ed589219bce1f8607f74 160 SUPERFAMILY SSF53927 5 149 5.52E-50 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AMIS_78600 2292c825c8e8ed589219bce1f8607f74 160 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 55 92 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AMIS_78600 2292c825c8e8ed589219bce1f8607f74 160 Pfam PF14437 MafB19-like deaminase 6 148 1.5E-27 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 AMIS_78600 2292c825c8e8ed589219bce1f8607f74 160 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 11 151 44.45 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 AMIS_33140 0ce64ef9befcb086aa217b0ddc323a53 393 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 292 1.3E-39 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMIS_33140 0ce64ef9befcb086aa217b0ddc323a53 393 SUPERFAMILY SSF51905 1 306 2.2E-31 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_33140 0ce64ef9befcb086aa217b0ddc323a53 393 Gene3D G3DSA:3.50.50.100 2 369 5.7E-70 T 14-10-2018 AMIS_33140 0ce64ef9befcb086aa217b0ddc323a53 393 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 262 280 4.5E-9 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMIS_33140 0ce64ef9befcb086aa217b0ddc323a53 393 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 98 106 4.5E-9 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMIS_33140 0ce64ef9befcb086aa217b0ddc323a53 393 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 4 26 4.5E-9 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMIS_33140 0ce64ef9befcb086aa217b0ddc323a53 393 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 140 164 4.5E-9 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMIS_33140 0ce64ef9befcb086aa217b0ddc323a53 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 5.4E-12 T 14-10-2018 AMIS_33140 0ce64ef9befcb086aa217b0ddc323a53 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 144 162 5.4E-12 T 14-10-2018 AMIS_33140 0ce64ef9befcb086aa217b0ddc323a53 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 97 115 5.4E-12 T 14-10-2018 AMIS_33140 0ce64ef9befcb086aa217b0ddc323a53 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 252 274 5.4E-12 T 14-10-2018 AMIS_61940 44dd1b28620ca00bf2566a289fb04aa4 402 Gene3D G3DSA:3.90.870.10 1 204 3.2E-92 T 14-10-2018 AMIS_61940 44dd1b28620ca00bf2566a289fb04aa4 402 Gene3D G3DSA:3.40.50.10990 205 378 7.7E-76 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AMIS_61940 44dd1b28620ca00bf2566a289fb04aa4 402 Hamap MF_01283 Riboflavin biosynthesis protein RibBA [ribBA]. 1 396 53.294 T 14-10-2018 IPR016299 Riboflavin biosynthesis protein RibBA GO:0009231 KEGG: 00740+3.5.4.25+4.1.99.12|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AMIS_61940 44dd1b28620ca00bf2566a289fb04aa4 402 Pfam PF00925 GTP cyclohydrolase II 207 372 7.0E-73 T 14-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AMIS_61940 44dd1b28620ca00bf2566a289fb04aa4 402 SUPERFAMILY SSF55821 2 198 1.26E-83 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AMIS_61940 44dd1b28620ca00bf2566a289fb04aa4 402 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 1 197 1.4E-78 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AMIS_61940 44dd1b28620ca00bf2566a289fb04aa4 402 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 204 400 41.202 T 14-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AMIS_61940 44dd1b28620ca00bf2566a289fb04aa4 402 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 6 197 4.3E-88 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AMIS_61940 44dd1b28620ca00bf2566a289fb04aa4 402 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 202 39.116 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AMIS_61940 44dd1b28620ca00bf2566a289fb04aa4 402 SUPERFAMILY SSF142695 205 376 3.27E-70 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AMIS_61940 44dd1b28620ca00bf2566a289fb04aa4 402 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 207 397 2.6E-73 T 14-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AMIS_61940 44dd1b28620ca00bf2566a289fb04aa4 402 PIRSF PIRSF001259 1 401 2.9E-177 T 14-10-2018 AMIS_73980 ba16427ccdfd8574d2d06086e2ee0c32 120 SUPERFAMILY SSF50729 5 117 1.69E-21 T 14-10-2018 AMIS_73980 ba16427ccdfd8574d2d06086e2ee0c32 120 Gene3D G3DSA:2.30.29.50 3 119 3.9E-11 T 14-10-2018 IPR037063 Bacterial Pleckstrin homology domain superfamily AMIS_73980 ba16427ccdfd8574d2d06086e2ee0c32 120 Pfam PF08000 Bacterial PH domain 13 115 1.7E-9 T 14-10-2018 IPR012544 Bacterial Pleckstrin homology domain AMIS_59820 68e5ad696535d1813a0e5909cf343480 478 Pfam PF00854 POT family 84 443 3.5E-62 T 14-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 AMIS_59820 68e5ad696535d1813a0e5909cf343480 478 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 146 158 - T 14-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 AMIS_59820 68e5ad696535d1813a0e5909cf343480 478 Gene3D G3DSA:1.20.1250.20 1 478 4.1E-127 T 14-10-2018 AMIS_59820 68e5ad696535d1813a0e5909cf343480 478 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 4 474 7.7E-148 T 14-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 AMIS_59820 68e5ad696535d1813a0e5909cf343480 478 SUPERFAMILY SSF103473 9 466 4.58E-29 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_4660 d6f5d7599ddf90c88481a24a0033d8b7 333 Gene3D G3DSA:1.10.260.40 8 65 2.6E-18 T 14-10-2018 AMIS_4660 d6f5d7599ddf90c88481a24a0033d8b7 333 ProSitePatterns PS00356 LacI-type HTH domain signature. 11 29 - T 14-10-2018 AMIS_4660 d6f5d7599ddf90c88481a24a0033d8b7 333 SUPERFAMILY SSF53822 67 317 7.07E-59 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_4660 d6f5d7599ddf90c88481a24a0033d8b7 333 SUPERFAMILY SSF47413 7 64 3.58E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_4660 d6f5d7599ddf90c88481a24a0033d8b7 333 SMART SM00354 8 80 2.3E-23 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_4660 d6f5d7599ddf90c88481a24a0033d8b7 333 Pfam PF13377 Periplasmic binding protein-like domain 175 328 1.9E-27 T 14-10-2018 AMIS_4660 d6f5d7599ddf90c88481a24a0033d8b7 333 Pfam PF00356 Bacterial regulatory proteins, lacI family 10 54 2.6E-15 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_4660 d6f5d7599ddf90c88481a24a0033d8b7 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 10 20 1.7E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_4660 d6f5d7599ddf90c88481a24a0033d8b7 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 20 30 1.7E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_4660 d6f5d7599ddf90c88481a24a0033d8b7 333 Gene3D G3DSA:3.40.50.2300 67 155 4.8E-20 T 14-10-2018 AMIS_4660 d6f5d7599ddf90c88481a24a0033d8b7 333 Gene3D G3DSA:3.40.50.2300 160 329 3.2E-43 T 14-10-2018 AMIS_16290 c0662961a1fdb37c3572c7064db45dc9 252 SMART SM00382 33 234 0.0026 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_16290 c0662961a1fdb37c3572c7064db45dc9 252 Gene3D G3DSA:3.40.50.300 1 249 3.3E-51 T 14-10-2018 AMIS_16290 c0662961a1fdb37c3572c7064db45dc9 252 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 4 247 3.9E-101 T 14-10-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524 AMIS_16290 c0662961a1fdb37c3572c7064db45dc9 252 SUPERFAMILY SSF52540 4 235 4.33E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_16290 c0662961a1fdb37c3572c7064db45dc9 252 Pfam PF00005 ABC transporter 25 175 4.8E-20 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_77860 f9475c1ffab4e9e8594e03ef9b48b144 175 SUPERFAMILY SSF55083 2 147 1.96E-38 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AMIS_77860 f9475c1ffab4e9e8594e03ef9b48b144 175 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 87 98 - T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AMIS_77860 f9475c1ffab4e9e8594e03ef9b48b144 175 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 137 1.3E-31 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AMIS_77860 f9475c1ffab4e9e8594e03ef9b48b144 175 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 137 6.9E-34 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AMIS_77860 f9475c1ffab4e9e8594e03ef9b48b144 175 Gene3D G3DSA:3.30.70.560 1 174 9.7E-43 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AMIS_54200 2f41ef390553aa7eea4907ae4d3c2126 246 Gene3D G3DSA:3.30.750.24 4 118 1.4E-5 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_54200 2f41ef390553aa7eea4907ae4d3c2126 246 Pfam PF13581 Histidine kinase-like ATPase domain 132 237 8.9E-9 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_54200 2f41ef390553aa7eea4907ae4d3c2126 246 SUPERFAMILY SSF52091 15 115 8.04E-5 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_54200 2f41ef390553aa7eea4907ae4d3c2126 246 SUPERFAMILY SSF55874 152 234 3.28E-6 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_54200 2f41ef390553aa7eea4907ae4d3c2126 246 Gene3D G3DSA:3.30.565.10 119 244 1.2E-24 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_64630 c1c4a9c5328aef19f5d924c03252e775 381 SMART SM00327 207 366 8.9E-6 T 14-10-2018 IPR002035 von Willebrand factor, type A AMIS_64630 c1c4a9c5328aef19f5d924c03252e775 381 SUPERFAMILY SSF53300 207 369 5.64E-24 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMIS_64630 c1c4a9c5328aef19f5d924c03252e775 381 Gene3D G3DSA:3.40.50.410 201 355 1.8E-10 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMIS_64630 c1c4a9c5328aef19f5d924c03252e775 381 Pfam PF05762 VWA domain containing CoxE-like protein 146 363 7.7E-58 T 14-10-2018 IPR008912 Uncharacterised protein family CoxE-like AMIS_15020 c602651634207d06a49c48f0f6d6aed0 1109 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 356 762 6.3E-140 T 14-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMIS_15020 c602651634207d06a49c48f0f6d6aed0 1109 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 63 945 1.1E-187 T 14-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMIS_15020 c602651634207d06a49c48f0f6d6aed0 1109 Pfam PF02811 PHP domain 64 237 1.2E-27 T 14-10-2018 IPR004013 PHP domain GO:0003824 AMIS_15020 c602651634207d06a49c48f0f6d6aed0 1109 Gene3D G3DSA:3.20.20.140 29 330 2.6E-76 T 14-10-2018 AMIS_15020 c602651634207d06a49c48f0f6d6aed0 1109 Pfam PF14579 Helix-hairpin-helix motif 836 943 4.2E-25 T 14-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMIS_15020 c602651634207d06a49c48f0f6d6aed0 1109 Gene3D G3DSA:1.10.150.280 878 935 3.3E-5 T 14-10-2018 AMIS_15020 c602651634207d06a49c48f0f6d6aed0 1109 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 62 1109 12.755 T 14-10-2018 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMIS_15020 c602651634207d06a49c48f0f6d6aed0 1109 SUPERFAMILY SSF89550 62 276 3.14E-21 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AMIS_15020 c602651634207d06a49c48f0f6d6aed0 1109 SMART SM00481 63 130 3.5E-24 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal AMIS_15020 c602651634207d06a49c48f0f6d6aed0 1109 Pfam PF01336 OB-fold nucleic acid binding domain 1023 1095 1.8E-6 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AMIS_11780 58bebd3d424bbffcb6fed549c5b18942 823 SUPERFAMILY SSF52279 310 684 2.88E-51 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 AMIS_11780 58bebd3d424bbffcb6fed549c5b18942 823 SMART SM01217 710 811 2.0E-10 T 14-10-2018 IPR026891 Fibronectin type III-like domain AMIS_11780 58bebd3d424bbffcb6fed549c5b18942 823 SUPERFAMILY SSF51445 5 306 4.84E-88 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_11780 58bebd3d424bbffcb6fed549c5b18942 823 Gene3D G3DSA:3.40.50.1700 295 620 1.7E-198 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 AMIS_11780 58bebd3d424bbffcb6fed549c5b18942 823 PRINTS PR00133 Glycosyl hydrolase family 3 signature 62 81 1.6E-30 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMIS_11780 58bebd3d424bbffcb6fed549c5b18942 823 PRINTS PR00133 Glycosyl hydrolase family 3 signature 208 226 1.6E-30 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMIS_11780 58bebd3d424bbffcb6fed549c5b18942 823 PRINTS PR00133 Glycosyl hydrolase family 3 signature 33 49 1.6E-30 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMIS_11780 58bebd3d424bbffcb6fed549c5b18942 823 PRINTS PR00133 Glycosyl hydrolase family 3 signature 139 155 1.6E-30 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMIS_11780 58bebd3d424bbffcb6fed549c5b18942 823 PRINTS PR00133 Glycosyl hydrolase family 3 signature 108 124 1.6E-30 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMIS_11780 58bebd3d424bbffcb6fed549c5b18942 823 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 310 681 1.1E-58 T 14-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 AMIS_11780 58bebd3d424bbffcb6fed549c5b18942 823 Gene3D G3DSA:2.60.40.10 680 733 5.1E-5 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_11780 58bebd3d424bbffcb6fed549c5b18942 823 Pfam PF14310 Fibronectin type III-like domain 752 807 6.4E-10 T 14-10-2018 IPR026891 Fibronectin type III-like domain AMIS_11780 58bebd3d424bbffcb6fed549c5b18942 823 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 34 274 3.1E-46 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMIS_11780 58bebd3d424bbffcb6fed549c5b18942 823 Gene3D G3DSA:2.60.40.10 747 822 2.9E-10 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_11780 58bebd3d424bbffcb6fed549c5b18942 823 Gene3D G3DSA:2.60.120.260 374 520 1.7E-198 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_11780 58bebd3d424bbffcb6fed549c5b18942 823 Gene3D G3DSA:3.20.20.300 6 664 1.7E-198 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 AMIS_32690 4229495edc87bca6b4253ab489cdd81d 199 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 150 194 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AMIS_32690 4229495edc87bca6b4253ab489cdd81d 199 SMART SM00342 116 198 7.4E-11 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMIS_32690 4229495edc87bca6b4253ab489cdd81d 199 Pfam PF12833 Helix-turn-helix domain 123 197 3.3E-15 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMIS_32690 4229495edc87bca6b4253ab489cdd81d 199 Gene3D G3DSA:1.10.10.60 103 199 5.6E-16 T 14-10-2018 AMIS_4340 16592785ab33d386dbe0284d1c92e1d5 781 Gene3D G3DSA:2.120.10.10 81 389 5.7E-29 T 14-10-2018 AMIS_4340 16592785ab33d386dbe0284d1c92e1d5 781 Gene3D G3DSA:2.60.120.560 597 768 1.5E-5 T 14-10-2018 AMIS_4340 16592785ab33d386dbe0284d1c92e1d5 781 Gene3D G3DSA:2.60.120.260 451 596 9.8E-12 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_4340 16592785ab33d386dbe0284d1c92e1d5 781 SUPERFAMILY SSF49785 479 593 3.4E-10 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_4340 16592785ab33d386dbe0284d1c92e1d5 781 SUPERFAMILY SSF50939 125 387 1.57E-19 T 14-10-2018 IPR036278 Sialidase superfamily KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 AMIS_4340 16592785ab33d386dbe0284d1c92e1d5 781 SUPERFAMILY SSF49899 656 758 1.19E-6 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily AMIS_4340 16592785ab33d386dbe0284d1c92e1d5 781 Pfam PF13088 BNR repeat-like domain 182 322 1.8E-10 T 14-10-2018 IPR011040 Sialidase KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 AMIS_4340 16592785ab33d386dbe0284d1c92e1d5 781 Pfam PF00754 F5/8 type C domain 474 572 1.1E-8 T 14-10-2018 IPR000421 Coagulation factor 5/8 C-terminal domain AMIS_9300 f43c7b96db9da59b49d9013adb124bd5 358 Pfam PF13298 DNA polymerase Ligase (LigD) 39 137 5.6E-32 T 14-10-2018 IPR014144 DNA ligase D, 3'-phosphoesterase domain AMIS_9300 f43c7b96db9da59b49d9013adb124bd5 358 SUPERFAMILY SSF56091 153 353 8.06E-31 T 14-10-2018 AMIS_9300 f43c7b96db9da59b49d9013adb124bd5 358 Gene3D G3DSA:3.30.1490.70 177 353 1.0E-41 T 14-10-2018 AMIS_9300 f43c7b96db9da59b49d9013adb124bd5 358 Pfam PF01068 ATP dependent DNA ligase domain 166 353 3.6E-17 T 14-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 AMIS_9300 f43c7b96db9da59b49d9013adb124bd5 358 TIGRFAM TIGR02777 LigD_PE_dom: DNA ligase D, 3'-phosphoesterase domain 5 150 2.8E-43 T 14-10-2018 IPR014144 DNA ligase D, 3'-phosphoesterase domain AMIS_9300 f43c7b96db9da59b49d9013adb124bd5 358 Gene3D G3DSA:3.30.470.30 190 312 1.0E-41 T 14-10-2018 AMIS_28820 d0446691c75e5db7224180b9b5015cc2 306 SUPERFAMILY SSF53213 51 303 3.53E-73 T 14-10-2018 AMIS_28820 d0446691c75e5db7224180b9b5015cc2 306 Gene3D G3DSA:3.40.830.10 42 304 3.3E-69 T 14-10-2018 AMIS_28820 d0446691c75e5db7224180b9b5015cc2 306 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 70 288 2.3E-36 T 14-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 AMIS_28820 d0446691c75e5db7224180b9b5015cc2 306 PIRSF PIRSF006157 47 306 2.5E-72 T 14-10-2018 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type GO:0008270|GO:0016701|GO:0055114 AMIS_16140 0568d44b784147c79d2f99186019e403 113 Gene3D G3DSA:2.20.28.270 3 81 6.9E-17 T 14-10-2018 IPR038638 RbpA superfamily AMIS_16140 0568d44b784147c79d2f99186019e403 113 Hamap MF_01483 RNA polymerase-binding protein RbpA [rbpA]. 17 113 24.805 T 14-10-2018 IPR025182 RNA polymerase-binding protein RbpA GO:0001000|GO:0045893 AMIS_16140 0568d44b784147c79d2f99186019e403 113 Pfam PF13397 RNA polymerase-binding protein 6 108 6.2E-41 T 14-10-2018 IPR025182 RNA polymerase-binding protein RbpA GO:0001000|GO:0045893 AMIS_27000 a54b5e384a1f1172ddd99b4d87c39762 184 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 60 2.1E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_27000 a54b5e384a1f1172ddd99b4d87c39762 184 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 1.3E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_27000 a54b5e384a1f1172ddd99b4d87c39762 184 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 1.3E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_27000 a54b5e384a1f1172ddd99b4d87c39762 184 SUPERFAMILY SSF46689 3 81 1.8E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_27000 a54b5e384a1f1172ddd99b4d87c39762 184 Gene3D G3DSA:1.10.357.10 10 183 4.2E-26 T 14-10-2018 AMIS_55600 a0c1783fd193a8a87cc662635a5b174a 243 SUPERFAMILY SSF46785 52 109 5.75E-6 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_5640 287830f0681e649267121a061e68c11f 215 SUPERFAMILY SSF54862 42 140 3.26E-18 T 14-10-2018 AMIS_5640 287830f0681e649267121a061e68c11f 215 Pfam PF00037 4Fe-4S binding domain 99 119 9.7E-9 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMIS_5640 287830f0681e649267121a061e68c11f 215 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 104 115 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMIS_5640 287830f0681e649267121a061e68c11f 215 Gene3D G3DSA:3.30.70.3270 34 186 2.0E-33 T 14-10-2018 AMIS_5640 287830f0681e649267121a061e68c11f 215 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 8 157 23.717 T 14-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_48000 ad3c04019d008aa3775380b3d6fe1bdf 136 Pfam PF08837 Protein of unknown function (DUF1810) 3 135 8.6E-58 T 14-10-2018 IPR014937 Protein of unknown function DUF1810 AMIS_48000 ad3c04019d008aa3775380b3d6fe1bdf 136 Gene3D G3DSA:1.25.40.380 1 136 2.1E-55 T 14-10-2018 IPR036287 Rv1873-like superfamily AMIS_48000 ad3c04019d008aa3775380b3d6fe1bdf 136 SUPERFAMILY SSF140736 3 135 5.23E-57 T 14-10-2018 IPR036287 Rv1873-like superfamily AMIS_48000 ad3c04019d008aa3775380b3d6fe1bdf 136 PIRSF PIRSF008546 2 136 9.4E-55 T 14-10-2018 IPR014937 Protein of unknown function DUF1810 AMIS_1060 c26753d498a5030ff42f6d379820d92f 405 SUPERFAMILY SSF102405 181 403 1.26E-17 T 14-10-2018 AMIS_45190 8f58b554d30e702e24e46e25f7a05f53 443 Gene3D G3DSA:3.10.28.20 356 443 3.4E-13 T 14-10-2018 AMIS_45190 8f58b554d30e702e24e46e25f7a05f53 443 SUPERFAMILY SSF141130 65 443 7.06E-71 T 14-10-2018 AMIS_45190 8f58b554d30e702e24e46e25f7a05f53 443 Pfam PF03069 Acetamidase/Formamidase family 129 443 3.3E-28 T 14-10-2018 IPR004304 Acetamidase/Formamidase GO:0016811 AMIS_45190 8f58b554d30e702e24e46e25f7a05f53 443 Gene3D G3DSA:2.60.120.580 250 346 5.5E-26 T 14-10-2018 AMIS_45190 8f58b554d30e702e24e46e25f7a05f53 443 Gene3D G3DSA:2.60.120.580 52 214 1.7E-10 T 14-10-2018 AMIS_1970 2f2af78e3cd3fd2fea9ceeccfc7ac3c4 207 SUPERFAMILY SSF52507 5 200 4.06E-41 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 AMIS_1970 2f2af78e3cd3fd2fea9ceeccfc7ac3c4 207 Gene3D G3DSA:3.40.50.1950 1 201 2.8E-66 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 AMIS_1970 2f2af78e3cd3fd2fea9ceeccfc7ac3c4 207 Pfam PF02441 Flavoprotein 5 179 2.0E-14 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AMIS_1970 2f2af78e3cd3fd2fea9ceeccfc7ac3c4 207 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 6 198 5.0E-43 T 14-10-2018 IPR004507 Flavin prenyltransferase UbiX-like AMIS_2100 01cc231c8742e744d5759a29ce2719b0 284 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_2100 01cc231c8742e744d5759a29ce2719b0 284 SMART SM00382 40 236 1.1E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_2100 01cc231c8742e744d5759a29ce2719b0 284 Gene3D G3DSA:3.40.50.300 15 264 1.4E-71 T 14-10-2018 AMIS_2100 01cc231c8742e744d5759a29ce2719b0 284 Pfam PF00005 ABC transporter 32 179 1.1E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_2100 01cc231c8742e744d5759a29ce2719b0 284 SUPERFAMILY SSF52540 15 245 6.16E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_57740 84c657a15413cd5b870245e62274adf5 252 SUPERFAMILY SSF53474 4 252 2.32E-36 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_57740 84c657a15413cd5b870245e62274adf5 252 Gene3D G3DSA:3.40.50.1820 2 252 1.2E-36 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_57740 84c657a15413cd5b870245e62274adf5 252 Pfam PF00561 alpha/beta hydrolase fold 24 123 5.3E-14 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_57740 84c657a15413cd5b870245e62274adf5 252 PRINTS PR00111 Alpha/beta hydrolase fold signature 99 112 9.2E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_57740 84c657a15413cd5b870245e62274adf5 252 PRINTS PR00111 Alpha/beta hydrolase fold signature 202 216 9.2E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_57740 84c657a15413cd5b870245e62274adf5 252 PRINTS PR00111 Alpha/beta hydrolase fold signature 53 68 9.2E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_5590 d2f083bdf3012565f798634383cb9a9c 433 SUPERFAMILY SSF56112 35 147 1.68E-6 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMIS_5590 d2f083bdf3012565f798634383cb9a9c 433 Pfam PF10009 Uncharacterized protein conserved in bacteria (DUF2252) 25 423 1.0E-111 T 14-10-2018 IPR018721 Protein of unknown function DUF2252 AMIS_10910 fb738208238cff62ebc46fb69f1847de 558 Pfam PF12848 ABC transporter 227 302 9.5E-13 T 14-10-2018 IPR032781 ABC-transporter extension domain AMIS_10910 fb738208238cff62ebc46fb69f1847de 558 Pfam PF00005 ABC transporter 21 188 8.7E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_10910 fb738208238cff62ebc46fb69f1847de 558 Gene3D G3DSA:3.40.50.300 3 282 3.2E-73 T 14-10-2018 AMIS_10910 fb738208238cff62ebc46fb69f1847de 558 SMART SM00382 346 516 7.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_10910 fb738208238cff62ebc46fb69f1847de 558 SMART SM00382 30 242 5.2E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_10910 fb738208238cff62ebc46fb69f1847de 558 SUPERFAMILY SSF52540 13 239 1.9E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_10910 fb738208238cff62ebc46fb69f1847de 558 ProSitePatterns PS00211 ABC transporters family signature. 443 457 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_10910 fb738208238cff62ebc46fb69f1847de 558 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 555 4.9E-269 T 14-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 AMIS_10910 fb738208238cff62ebc46fb69f1847de 558 Gene3D G3DSA:3.40.50.300 283 556 2.4E-63 T 14-10-2018 AMIS_10910 fb738208238cff62ebc46fb69f1847de 558 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_10910 fb738208238cff62ebc46fb69f1847de 558 Pfam PF00005 ABC transporter 338 471 1.6E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_10910 fb738208238cff62ebc46fb69f1847de 558 SUPERFAMILY SSF52540 307 507 5.33E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_22600 ff8666c358eb8ce36b85ebd1db19f5a7 129 Gene3D G3DSA:1.10.10.60 64 117 3.2E-17 T 14-10-2018 AMIS_22600 ff8666c358eb8ce36b85ebd1db19f5a7 129 SUPERFAMILY SSF46689 9 60 5.82E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_22600 ff8666c358eb8ce36b85ebd1db19f5a7 129 SUPERFAMILY SSF46689 62 113 4.93E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_22600 ff8666c358eb8ce36b85ebd1db19f5a7 129 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 93 109 2.1E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMIS_22600 ff8666c358eb8ce36b85ebd1db19f5a7 129 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 78 93 2.1E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMIS_22600 ff8666c358eb8ce36b85ebd1db19f5a7 129 Pfam PF12833 Helix-turn-helix domain 32 110 8.0E-26 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMIS_22600 ff8666c358eb8ce36b85ebd1db19f5a7 129 SMART SM00342 26 109 2.3E-31 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMIS_22600 ff8666c358eb8ce36b85ebd1db19f5a7 129 Gene3D G3DSA:1.10.10.60 5 63 1.5E-13 T 14-10-2018 AMIS_22600 ff8666c358eb8ce36b85ebd1db19f5a7 129 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 63 105 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AMIS_31260 f44104bbc62356050e5b51a4a1db629f 251 Pfam PF09335 SNARE associated Golgi protein 37 166 2.2E-20 T 14-10-2018 IPR032816 SNARE associated Golgi protein AMIS_64760 810196c933f597073db8ffa6a88fe793 169 TIGRFAM TIGR02983 SigE-fam_strep: RNA polymerase sigma-70 factor, sigma-E family 6 160 5.3E-45 T 14-10-2018 IPR014325 RNA polymerase sigma-E factor, actinobacteria GO:0016987 AMIS_64760 810196c933f597073db8ffa6a88fe793 169 Pfam PF08281 Sigma-70, region 4 102 154 1.3E-13 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_64760 810196c933f597073db8ffa6a88fe793 169 Gene3D G3DSA:1.10.1740.10 1 80 1.9E-9 T 14-10-2018 AMIS_64760 810196c933f597073db8ffa6a88fe793 169 SUPERFAMILY SSF88659 99 159 3.92E-14 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_64760 810196c933f597073db8ffa6a88fe793 169 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 15 156 1.2E-15 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_64760 810196c933f597073db8ffa6a88fe793 169 Pfam PF04542 Sigma-70 region 2 17 78 2.3E-8 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_64760 810196c933f597073db8ffa6a88fe793 169 SUPERFAMILY SSF88946 8 87 5.89E-10 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_64760 810196c933f597073db8ffa6a88fe793 169 Gene3D G3DSA:1.10.10.10 88 161 1.2E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_64830 99a900a28b7cd66a806b389bdc1c224a 691 PIRSF PIRSF005536 90 653 2.4E-159 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AMIS_64830 99a900a28b7cd66a806b389bdc1c224a 691 Gene3D G3DSA:3.20.20.70 277 581 2.2E-111 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_64830 99a900a28b7cd66a806b389bdc1c224a 691 Pfam PF16875 Glycosyl hydrolase family 36 N-terminal domain 20 251 2.8E-39 T 14-10-2018 IPR031704 Glycosyl hydrolase family 36, N-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AMIS_64830 99a900a28b7cd66a806b389bdc1c224a 691 Pfam PF02065 Melibiase 255 584 2.0E-105 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AMIS_64830 99a900a28b7cd66a806b389bdc1c224a 691 Pfam PF16874 Glycosyl hydrolase family 36 C-terminal domain 601 680 2.2E-8 T 14-10-2018 IPR031705 Glycosyl hydrolase family 36, C-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AMIS_64830 99a900a28b7cd66a806b389bdc1c224a 691 PRINTS PR00743 Glycosyl hydrolase family 36 signature 258 278 1.2E-46 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AMIS_64830 99a900a28b7cd66a806b389bdc1c224a 691 PRINTS PR00743 Glycosyl hydrolase family 36 signature 426 441 1.2E-46 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AMIS_64830 99a900a28b7cd66a806b389bdc1c224a 691 PRINTS PR00743 Glycosyl hydrolase family 36 signature 370 392 1.2E-46 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AMIS_64830 99a900a28b7cd66a806b389bdc1c224a 691 PRINTS PR00743 Glycosyl hydrolase family 36 signature 469 485 1.2E-46 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AMIS_64830 99a900a28b7cd66a806b389bdc1c224a 691 PRINTS PR00743 Glycosyl hydrolase family 36 signature 292 306 1.2E-46 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AMIS_64830 99a900a28b7cd66a806b389bdc1c224a 691 PRINTS PR00743 Glycosyl hydrolase family 36 signature 494 510 1.2E-46 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AMIS_64830 99a900a28b7cd66a806b389bdc1c224a 691 PRINTS PR00743 Glycosyl hydrolase family 36 signature 207 222 1.2E-46 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AMIS_64830 99a900a28b7cd66a806b389bdc1c224a 691 PRINTS PR00743 Glycosyl hydrolase family 36 signature 320 335 1.2E-46 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AMIS_64830 99a900a28b7cd66a806b389bdc1c224a 691 ProSitePatterns PS00512 Alpha-galactosidase signature. 321 337 - T 14-10-2018 IPR000111 Glycoside hydrolase family 27/36, conserved site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AMIS_64830 99a900a28b7cd66a806b389bdc1c224a 691 SUPERFAMILY SSF51445 289 611 2.18E-92 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_64830 99a900a28b7cd66a806b389bdc1c224a 691 Gene3D G3DSA:2.70.98.60 103 275 4.7E-38 T 14-10-2018 IPR038417 Alpha-galactosidase, N-terminal domain superfamily KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AMIS_51560 7ef17bb980ea200cf2f4bc1ef88470f4 505 Gene3D G3DSA:1.20.200.10 206 505 2.7E-35 T 14-10-2018 AMIS_51560 7ef17bb980ea200cf2f4bc1ef88470f4 505 Pfam PF00221 Aromatic amino acid lyase 19 446 1.6E-74 T 14-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 AMIS_51560 7ef17bb980ea200cf2f4bc1ef88470f4 505 Gene3D G3DSA:1.10.275.10 2 203 1.9E-40 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal AMIS_51560 7ef17bb980ea200cf2f4bc1ef88470f4 505 SUPERFAMILY SSF48557 11 448 4.0E-77 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 AMIS_10380 46c6fc58d8f520b2e01aa54a3cd9d238 491 SMART SM00656 212 427 7.5E-17 T 14-10-2018 IPR002022 Pectate lyase AMIS_10380 46c6fc58d8f520b2e01aa54a3cd9d238 491 Pfam PF00544 Pectate lyase 250 419 7.1E-18 T 14-10-2018 IPR002022 Pectate lyase AMIS_10380 46c6fc58d8f520b2e01aa54a3cd9d238 491 Gene3D G3DSA:2.160.20.10 192 489 4.2E-82 T 14-10-2018 IPR012334 Pectin lyase fold AMIS_10380 46c6fc58d8f520b2e01aa54a3cd9d238 491 Gene3D G3DSA:2.80.10.50 24 125 6.7E-25 T 14-10-2018 AMIS_10380 46c6fc58d8f520b2e01aa54a3cd9d238 491 SUPERFAMILY SSF51126 196 486 3.46E-63 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor AMIS_10380 46c6fc58d8f520b2e01aa54a3cd9d238 491 Gene3D G3DSA:2.80.10.50 126 188 4.9E-14 T 14-10-2018 AMIS_10380 46c6fc58d8f520b2e01aa54a3cd9d238 491 Pfam PF00652 Ricin-type beta-trefoil lectin domain 41 173 1.7E-19 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_10380 46c6fc58d8f520b2e01aa54a3cd9d238 491 SMART SM00458 38 176 2.5E-14 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_10380 46c6fc58d8f520b2e01aa54a3cd9d238 491 SUPERFAMILY SSF50370 36 177 1.61E-40 T 14-10-2018 IPR035992 Ricin B-like lectins AMIS_31700 2621f1511bf63d52528deb6037b75a7d 346 Pfam PF13358 DDE superfamily endonuclease 166 301 1.4E-18 T 14-10-2018 IPR038717 Tc1-like transposase, DDE domain AMIS_31700 2621f1511bf63d52528deb6037b75a7d 346 SUPERFAMILY SSF53098 206 316 6.07E-8 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily AMIS_31700 2621f1511bf63d52528deb6037b75a7d 346 SUPERFAMILY SSF46689 23 128 3.76E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_31700 2621f1511bf63d52528deb6037b75a7d 346 Pfam PF13551 Winged helix-turn helix 31 84 3.9E-12 T 14-10-2018 AMIS_31700 2621f1511bf63d52528deb6037b75a7d 346 Gene3D G3DSA:3.30.420.470 163 321 3.1E-9 T 14-10-2018 AMIS_34550 2621f1511bf63d52528deb6037b75a7d 346 Pfam PF13358 DDE superfamily endonuclease 166 301 1.4E-18 T 14-10-2018 IPR038717 Tc1-like transposase, DDE domain AMIS_34550 2621f1511bf63d52528deb6037b75a7d 346 SUPERFAMILY SSF53098 206 316 6.07E-8 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily AMIS_34550 2621f1511bf63d52528deb6037b75a7d 346 SUPERFAMILY SSF46689 23 128 3.76E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_34550 2621f1511bf63d52528deb6037b75a7d 346 Pfam PF13551 Winged helix-turn helix 31 84 3.9E-12 T 14-10-2018 AMIS_34550 2621f1511bf63d52528deb6037b75a7d 346 Gene3D G3DSA:3.30.420.470 163 321 3.1E-9 T 14-10-2018 AMIS_26650 5edc9f1fe70a4bea99819a7ff5df1fc2 417 Pfam PF07995 Glucose / Sorbosone dehydrogenase 74 404 6.5E-43 T 14-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase AMIS_26650 5edc9f1fe70a4bea99819a7ff5df1fc2 417 Gene3D G3DSA:2.120.10.30 61 413 3.6E-82 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AMIS_26650 5edc9f1fe70a4bea99819a7ff5df1fc2 417 SUPERFAMILY SSF50952 68 413 6.02E-35 T 14-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 AMIS_34470 cb40e7bfd6a1006578456b4c9d1e38c2 344 Pfam PF13377 Periplasmic binding protein-like domain 174 338 2.7E-38 T 14-10-2018 AMIS_34470 cb40e7bfd6a1006578456b4c9d1e38c2 344 Gene3D G3DSA:1.10.260.40 2 65 2.9E-20 T 14-10-2018 AMIS_34470 cb40e7bfd6a1006578456b4c9d1e38c2 344 SUPERFAMILY SSF47413 8 65 2.34E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_34470 cb40e7bfd6a1006578456b4c9d1e38c2 344 Gene3D G3DSA:3.40.50.2300 74 330 6.3E-76 T 14-10-2018 AMIS_34470 cb40e7bfd6a1006578456b4c9d1e38c2 344 SUPERFAMILY SSF53822 68 339 4.54E-68 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_34470 cb40e7bfd6a1006578456b4c9d1e38c2 344 SMART SM00354 7 77 6.3E-19 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_34470 cb40e7bfd6a1006578456b4c9d1e38c2 344 ProSitePatterns PS00356 LacI-type HTH domain signature. 10 28 - T 14-10-2018 AMIS_34470 cb40e7bfd6a1006578456b4c9d1e38c2 344 Gene3D G3DSA:3.40.50.2300 166 335 6.3E-76 T 14-10-2018 AMIS_34470 cb40e7bfd6a1006578456b4c9d1e38c2 344 Pfam PF00356 Bacterial regulatory proteins, lacI family 10 54 1.7E-16 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_44210 488feedba4cce048818b41f5eb9ccc0f 495 SUPERFAMILY SSF51011 369 488 2.81E-25 T 14-10-2018 AMIS_44210 488feedba4cce048818b41f5eb9ccc0f 495 SUPERFAMILY SSF51445 17 380 1.33E-104 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_44210 488feedba4cce048818b41f5eb9ccc0f 495 SMART SM00813 291 483 5.2E-51 T 14-10-2018 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 AMIS_44210 488feedba4cce048818b41f5eb9ccc0f 495 Gene3D G3DSA:3.20.20.80 18 381 1.0E-200 T 14-10-2018 AMIS_44210 488feedba4cce048818b41f5eb9ccc0f 495 Pfam PF06964 Alpha-L-arabinofuranosidase C-terminal domain 291 473 1.1E-30 T 14-10-2018 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 AMIS_44210 488feedba4cce048818b41f5eb9ccc0f 495 Gene3D G3DSA:2.60.40.1180 8 486 1.0E-200 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta AMIS_24880 6db0fac2e73163668d96d97c2f019c23 264 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 53 257 7.8E-71 T 14-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 AMIS_24880 6db0fac2e73163668d96d97c2f019c23 264 Gene3D G3DSA:1.10.3720.10 9 261 1.1E-72 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_24880 6db0fac2e73163668d96d97c2f019c23 264 SUPERFAMILY SSF161098 8 256 4.32E-57 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_24880 6db0fac2e73163668d96d97c2f019c23 264 TIGRFAM TIGR01581 Mo_ABC_porter: NifC-like ABC-type porter 30 253 3.3E-75 T 14-10-2018 IPR006469 NifC-like ABC-type porter GO:0005215|GO:0016020|GO:0055085 AMIS_24880 6db0fac2e73163668d96d97c2f019c23 264 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 70 256 3.0E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_57360 bc5a2318170c91bcb60d2c9a4ed21c69 444 Gene3D G3DSA:3.40.50.2300 185 331 8.7E-15 T 14-10-2018 AMIS_57360 bc5a2318170c91bcb60d2c9a4ed21c69 444 Gene3D G3DSA:3.40.50.2300 76 399 8.7E-15 T 14-10-2018 AMIS_57360 bc5a2318170c91bcb60d2c9a4ed21c69 444 Pfam PF13458 Periplasmic binding protein 71 428 1.7E-15 T 14-10-2018 IPR028081 Leucine-binding protein domain AMIS_57360 bc5a2318170c91bcb60d2c9a4ed21c69 444 SUPERFAMILY SSF53822 69 429 5.96E-17 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_17870 ab1b69beaa208b806af2e3af659df0ff 489 SUPERFAMILY SSF51445 7 385 5.76E-55 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_17870 ab1b69beaa208b806af2e3af659df0ff 489 Gene3D G3DSA:3.20.20.80 31 367 2.0E-46 T 14-10-2018 AMIS_17870 ab1b69beaa208b806af2e3af659df0ff 489 SMART SM00642 74 386 1.2E-4 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMIS_46950 3ddca6980137750be0e4906606a4232e 269 Pfam PF01925 Sulfite exporter TauE/SafE 9 241 1.3E-28 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AMIS_38060 01d9fa9cdc1c1eaac219985d6e11b7f1 313 SMART SM00829 10 311 1.9E-31 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMIS_38060 01d9fa9cdc1c1eaac219985d6e11b7f1 313 SUPERFAMILY SSF51735 118 237 2.85E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_38060 01d9fa9cdc1c1eaac219985d6e11b7f1 313 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 93 6.0E-9 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMIS_38060 01d9fa9cdc1c1eaac219985d6e11b7f1 313 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 146 167 - T 14-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 AMIS_38060 01d9fa9cdc1c1eaac219985d6e11b7f1 313 Gene3D G3DSA:3.40.50.720 129 262 9.8E-103 T 14-10-2018 AMIS_38060 01d9fa9cdc1c1eaac219985d6e11b7f1 313 SUPERFAMILY SSF50129 1 151 8.52E-38 T 14-10-2018 IPR011032 GroES-like superfamily AMIS_38060 01d9fa9cdc1c1eaac219985d6e11b7f1 313 Gene3D G3DSA:3.90.180.10 8 310 9.8E-103 T 14-10-2018 AMIS_38060 01d9fa9cdc1c1eaac219985d6e11b7f1 313 Pfam PF13602 Zinc-binding dehydrogenase 188 311 2.5E-27 T 14-10-2018 AMIS_40350 8a9ad6fbf84e75baf36589743e6a3668 176 Gene3D G3DSA:1.10.10.10 19 79 6.3E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_40350 8a9ad6fbf84e75baf36589743e6a3668 176 SMART SM00421 16 73 4.4E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_40350 8a9ad6fbf84e75baf36589743e6a3668 176 Pfam PF00196 Bacterial regulatory proteins, luxR family 24 73 4.9E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_40350 8a9ad6fbf84e75baf36589743e6a3668 176 SUPERFAMILY SSF46894 11 79 8.16E-13 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_70380 72ecef0f4a0f0851a8d916dbee21a8ea 582 Pfam PF17102 Stealth protein CR3, conserved region 3 428 476 1.3E-15 T 14-10-2018 IPR031357 Stealth protein CR3, conserved region 3 AMIS_70380 72ecef0f4a0f0851a8d916dbee21a8ea 582 Pfam PF17103 Stealth protein CR4, conserved region 4 504 553 6.2E-12 T 14-10-2018 IPR031356 Stealth protein CR4, conserved region 4 AMIS_70380 72ecef0f4a0f0851a8d916dbee21a8ea 582 Pfam PF11380 Stealth protein CR2, conserved region 2 278 383 1.4E-44 T 14-10-2018 IPR021520 Stealth protein CR2, conserved region 2 GO:0016772 AMIS_70380 72ecef0f4a0f0851a8d916dbee21a8ea 582 Pfam PF17101 Stealth protein CR1, conserved region 1 236 261 5.3E-14 T 14-10-2018 IPR031358 Stealth protein CR1, conserved region 1 AMIS_26040 7c3769a332f0e479f05729c43acf7b13 181 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 59 104 2.1E-13 T 14-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AMIS_26040 7c3769a332f0e479f05729c43acf7b13 181 Gene3D G3DSA:1.20.1290.10 14 176 4.2E-45 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AMIS_26040 7c3769a332f0e479f05729c43acf7b13 181 TIGRFAM TIGR01926 peroxid_rel: uncharacterized peroxidase-related enzyme 4 170 7.6E-27 T 14-10-2018 IPR010195 Uncharacterised peroxidase-related AMIS_26040 7c3769a332f0e479f05729c43acf7b13 181 Pfam PF02627 Carboxymuconolactone decarboxylase family 51 122 2.2E-10 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AMIS_26040 7c3769a332f0e479f05729c43acf7b13 181 SUPERFAMILY SSF69118 1 177 6.31E-52 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AMIS_18500 a5392a39d7c680da0d12ff44947c66de 186 Gene3D G3DSA:3.40.630.30 15 175 1.4E-15 T 14-10-2018 AMIS_18500 a5392a39d7c680da0d12ff44947c66de 186 Pfam PF00583 Acetyltransferase (GNAT) family 38 156 1.1E-9 T 14-10-2018 IPR000182 GNAT domain AMIS_18500 a5392a39d7c680da0d12ff44947c66de 186 SUPERFAMILY SSF55729 19 175 4.79E-17 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_58530 83c019e22aba525f85ffc99e867bda02 290 SUPERFAMILY SSF52540 47 278 3.07E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_58530 83c019e22aba525f85ffc99e867bda02 290 Gene3D G3DSA:3.40.50.300 47 276 1.6E-25 T 14-10-2018 AMIS_58530 83c019e22aba525f85ffc99e867bda02 290 Pfam PF00685 Sulfotransferase domain 121 274 8.9E-14 T 14-10-2018 IPR000863 Sulfotransferase domain GO:0008146 AMIS_66240 b7c9261f8745b6c0a7df3d72ad8eca29 433 Gene3D G3DSA:3.40.190.10 45 387 1.1E-119 T 14-10-2018 AMIS_66240 b7c9261f8745b6c0a7df3d72ad8eca29 433 SUPERFAMILY SSF53850 42 431 1.89E-48 T 14-10-2018 AMIS_66240 b7c9261f8745b6c0a7df3d72ad8eca29 433 Pfam PF01547 Bacterial extracellular solute-binding protein 55 343 1.0E-23 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein AMIS_66240 b7c9261f8745b6c0a7df3d72ad8eca29 433 Gene3D G3DSA:3.40.190.10 162 409 1.1E-119 T 14-10-2018 AMIS_10970 d879d540e5e8c8044559e7d73fd1136e 431 SUPERFAMILY SSF103473 12 397 1.57E-28 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_10970 d879d540e5e8c8044559e7d73fd1136e 431 Gene3D G3DSA:1.20.1250.20 11 394 3.7E-28 T 14-10-2018 AMIS_10970 d879d540e5e8c8044559e7d73fd1136e 431 Pfam PF07690 Major Facilitator Superfamily 19 317 1.6E-11 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_38670 ef65c10e284018b35e0c2ce0e8ee4385 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 69 80 1.1E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_38670 ef65c10e284018b35e0c2ce0e8ee4385 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 180 1.1E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_38670 ef65c10e284018b35e0c2ce0e8ee4385 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.1E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_38670 ef65c10e284018b35e0c2ce0e8ee4385 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 116 132 1.1E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_38670 ef65c10e284018b35e0c2ce0e8ee4385 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 142 161 1.1E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_38670 ef65c10e284018b35e0c2ce0e8ee4385 267 Gene3D G3DSA:3.40.50.720 2 256 2.7E-67 T 14-10-2018 AMIS_38670 ef65c10e284018b35e0c2ce0e8ee4385 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 69 80 2.1E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_38670 ef65c10e284018b35e0c2ce0e8ee4385 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 122 130 2.1E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_38670 ef65c10e284018b35e0c2ce0e8ee4385 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 161 2.1E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_38670 ef65c10e284018b35e0c2ce0e8ee4385 267 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 129 157 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMIS_38670 ef65c10e284018b35e0c2ce0e8ee4385 267 SUPERFAMILY SSF51735 3 240 3.04E-62 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_38670 ef65c10e284018b35e0c2ce0e8ee4385 267 Pfam PF00106 short chain dehydrogenase 4 183 9.7E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_6370 1759f540c90d1ced4cc93b5a26fd94e6 551 Gene3D G3DSA:3.40.50.300 327 551 1.6E-31 T 14-10-2018 AMIS_6370 1759f540c90d1ced4cc93b5a26fd94e6 551 Pfam PF00005 ABC transporter 348 493 1.9E-12 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_6370 1759f540c90d1ced4cc93b5a26fd94e6 551 SMART SM00382 353 546 4.4E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_6370 1759f540c90d1ced4cc93b5a26fd94e6 551 SMART SM00382 32 237 6.9E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_6370 1759f540c90d1ced4cc93b5a26fd94e6 551 SUPERFAMILY SSF52540 18 237 1.36E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_6370 1759f540c90d1ced4cc93b5a26fd94e6 551 SUPERFAMILY SSF52540 338 543 1.31E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_6370 1759f540c90d1ced4cc93b5a26fd94e6 551 Pfam PF00005 ABC transporter 25 192 1.0E-17 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_6370 1759f540c90d1ced4cc93b5a26fd94e6 551 Gene3D G3DSA:3.40.50.300 6 287 7.3E-42 T 14-10-2018 AMIS_31200 d03794a814f4c424954e582687449616 264 Gene3D G3DSA:1.25.40.10 164 263 5.0E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_31200 d03794a814f4c424954e582687449616 264 Gene3D G3DSA:1.25.40.10 2 163 9.1E-21 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_31200 d03794a814f4c424954e582687449616 264 SUPERFAMILY SSF48452 128 248 2.47E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_31200 d03794a814f4c424954e582687449616 264 SUPERFAMILY SSF48452 3 152 2.11E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_31200 d03794a814f4c424954e582687449616 264 SMART SM00028 175 208 31.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_31200 d03794a814f4c424954e582687449616 264 SMART SM00028 91 124 82.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_31200 d03794a814f4c424954e582687449616 264 SMART SM00028 46 79 1.1 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_31200 d03794a814f4c424954e582687449616 264 Pfam PF13424 Tetratricopeptide repeat 174 248 1.9E-9 T 14-10-2018 AMIS_31200 d03794a814f4c424954e582687449616 264 Pfam PF13424 Tetratricopeptide repeat 3 76 2.9E-8 T 14-10-2018 AMIS_1120 dddeea9051d972c823e3f5a297e0ba77 413 Gene3D G3DSA:3.30.1490.20 122 178 7.4E-13 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AMIS_1120 dddeea9051d972c823e3f5a297e0ba77 413 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 2 407 5.1E-137 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AMIS_1120 dddeea9051d972c823e3f5a297e0ba77 413 SMART SM01209 101 283 3.6E-100 T 14-10-2018 AMIS_1120 dddeea9051d972c823e3f5a297e0ba77 413 Gene3D G3DSA:3.40.50.20 1 93 3.0E-30 T 14-10-2018 AMIS_1120 dddeea9051d972c823e3f5a297e0ba77 413 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 101 283 1.1E-59 T 14-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AMIS_1120 dddeea9051d972c823e3f5a297e0ba77 413 SMART SM01210 318 407 3.2E-39 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AMIS_1120 dddeea9051d972c823e3f5a297e0ba77 413 SUPERFAMILY SSF56059 102 307 8.08E-52 T 14-10-2018 AMIS_1120 dddeea9051d972c823e3f5a297e0ba77 413 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 2 100 2.9E-29 T 14-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AMIS_1120 dddeea9051d972c823e3f5a297e0ba77 413 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 277 284 - T 14-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AMIS_1120 dddeea9051d972c823e3f5a297e0ba77 413 Gene3D G3DSA:3.90.600.10 318 404 1.0E-27 T 14-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AMIS_1120 dddeea9051d972c823e3f5a297e0ba77 413 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 407 39.595 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AMIS_1120 dddeea9051d972c823e3f5a297e0ba77 413 SUPERFAMILY SSF52440 2 101 5.32E-31 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AMIS_1120 dddeea9051d972c823e3f5a297e0ba77 413 SUPERFAMILY SSF51246 317 407 8.37E-25 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AMIS_1120 dddeea9051d972c823e3f5a297e0ba77 413 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 319 404 4.8E-26 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AMIS_1120 dddeea9051d972c823e3f5a297e0ba77 413 Gene3D G3DSA:3.30.470.20 179 315 1.9E-50 T 14-10-2018 AMIS_57950 82b34ab112f78e68ecea015b5c910f40 567 Gene3D G3DSA:3.50.50.60 23 385 1.1E-128 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_57950 82b34ab112f78e68ecea015b5c910f40 567 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 27 44 - T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMIS_57950 82b34ab112f78e68ecea015b5c910f40 567 Gene3D G3DSA:1.10.8.870 410 553 1.3E-29 T 14-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMIS_57950 82b34ab112f78e68ecea015b5c910f40 567 SUPERFAMILY SSF54373 250 342 3.4E-8 T 14-10-2018 AMIS_57950 82b34ab112f78e68ecea015b5c910f40 567 Gene3D G3DSA:3.30.9.10 101 343 1.1E-128 T 14-10-2018 AMIS_57950 82b34ab112f78e68ecea015b5c910f40 567 Pfam PF01266 FAD dependent oxidoreductase 23 372 4.4E-54 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AMIS_57950 82b34ab112f78e68ecea015b5c910f40 567 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 336 342 6.7E-31 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMIS_57950 82b34ab112f78e68ecea015b5c910f40 567 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 366 378 6.7E-31 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMIS_57950 82b34ab112f78e68ecea015b5c910f40 567 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 22 34 6.7E-31 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMIS_57950 82b34ab112f78e68ecea015b5c910f40 567 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 97 109 6.7E-31 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMIS_57950 82b34ab112f78e68ecea015b5c910f40 567 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 51 63 6.7E-31 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMIS_57950 82b34ab112f78e68ecea015b5c910f40 567 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 35 45 6.7E-31 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMIS_57950 82b34ab112f78e68ecea015b5c910f40 567 SUPERFAMILY SSF51905 22 380 6.86E-38 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_57950 82b34ab112f78e68ecea015b5c910f40 567 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 399 524 6.7E-32 T 14-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMIS_57950 82b34ab112f78e68ecea015b5c910f40 567 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 371 381 - T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMIS_29450 8f3f7499923394579c4731d24b46b143 427 Gene3D G3DSA:1.20.1250.20 19 212 1.8E-16 T 14-10-2018 AMIS_29450 8f3f7499923394579c4731d24b46b143 427 SUPERFAMILY SSF103473 27 424 9.55E-43 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_29450 8f3f7499923394579c4731d24b46b143 427 Pfam PF07690 Major Facilitator Superfamily 28 288 6.5E-19 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_29450 8f3f7499923394579c4731d24b46b143 427 Gene3D G3DSA:1.20.1250.20 233 427 2.0E-21 T 14-10-2018 AMIS_16870 2d0f324d3169d880424b7ef9da66176b 264 Gene3D G3DSA:3.30.1330.30 4 102 3.0E-7 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like AMIS_16870 2d0f324d3169d880424b7ef9da66176b 264 Pfam PF00588 SpoU rRNA Methylase family 119 259 1.3E-31 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AMIS_16870 2d0f324d3169d880424b7ef9da66176b 264 SUPERFAMILY SSF55315 6 103 1.69E-16 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like AMIS_16870 2d0f324d3169d880424b7ef9da66176b 264 Gene3D G3DSA:3.40.1280.10 107 264 6.5E-47 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMIS_16870 2d0f324d3169d880424b7ef9da66176b 264 SUPERFAMILY SSF75217 96 264 3.01E-38 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases AMIS_68300 b9029e7d9e650f17d32f6eecbefaabae 345 Gene3D G3DSA:3.20.20.210 2 345 1.2E-145 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 AMIS_68300 b9029e7d9e650f17d32f6eecbefaabae 345 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 6 340 5.0E-126 T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AMIS_68300 b9029e7d9e650f17d32f6eecbefaabae 345 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 340 4.0E-124 T 14-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AMIS_68300 b9029e7d9e650f17d32f6eecbefaabae 345 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AMIS_68300 b9029e7d9e650f17d32f6eecbefaabae 345 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 139 155 - T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AMIS_68300 b9029e7d9e650f17d32f6eecbefaabae 345 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 342 47.467 T 14-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AMIS_68300 b9029e7d9e650f17d32f6eecbefaabae 345 SUPERFAMILY SSF51726 7 342 9.42E-104 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 AMIS_62500 31d124117210bdfa4e89e0ab889cace0 420 Gene3D G3DSA:3.40.190.10 57 375 4.0E-79 T 14-10-2018 AMIS_62500 31d124117210bdfa4e89e0ab889cace0 420 Gene3D G3DSA:3.40.190.10 156 414 4.0E-79 T 14-10-2018 AMIS_62500 31d124117210bdfa4e89e0ab889cace0 420 SUPERFAMILY SSF53850 16 418 4.14E-70 T 14-10-2018 AMIS_62500 31d124117210bdfa4e89e0ab889cace0 420 Pfam PF13416 Bacterial extracellular solute-binding protein 59 354 9.3E-34 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein AMIS_72020 30dcd751f0b6613e0d41c8f2b03af773 494 SUPERFAMILY SSF55961 337 482 5.5E-9 T 14-10-2018 AMIS_72020 30dcd751f0b6613e0d41c8f2b03af773 494 Pfam PF13460 NAD(P)H-binding 7 109 5.0E-19 T 14-10-2018 IPR016040 NAD(P)-binding domain AMIS_72020 30dcd751f0b6613e0d41c8f2b03af773 494 Pfam PF11066 Protein of unknown function (DUF2867) 327 472 1.1E-41 T 14-10-2018 IPR021295 Protein of unknown function DUF2867 AMIS_72020 30dcd751f0b6613e0d41c8f2b03af773 494 Gene3D G3DSA:3.40.50.720 2 296 1.1E-48 T 14-10-2018 AMIS_72020 30dcd751f0b6613e0d41c8f2b03af773 494 SUPERFAMILY SSF51735 2 293 4.3E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_670 45d6a007cd782e9ccf36892222de3936 172 SUPERFAMILY SSF53254 5 152 3.05E-24 T 14-10-2018 IPR029033 Histidine phosphatase superfamily AMIS_670 45d6a007cd782e9ccf36892222de3936 172 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 71 2.1E-9 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AMIS_670 45d6a007cd782e9ccf36892222de3936 172 Gene3D G3DSA:3.40.50.1240 1 170 6.0E-46 T 14-10-2018 IPR029033 Histidine phosphatase superfamily AMIS_670 45d6a007cd782e9ccf36892222de3936 172 SMART SM00855 5 123 1.4E-10 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AMIS_54390 8a32e030a409f45dcfd4b836465e27e9 339 Pfam PF02607 B12 binding domain 12 81 1.0E-11 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMIS_54390 8a32e030a409f45dcfd4b836465e27e9 339 SUPERFAMILY SSF52242 91 208 2.2E-20 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 AMIS_54390 8a32e030a409f45dcfd4b836465e27e9 339 Pfam PF02310 B12 binding domain 94 208 1.2E-17 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 AMIS_54390 8a32e030a409f45dcfd4b836465e27e9 339 SUPERFAMILY SSF46458 217 322 5.32E-6 T 14-10-2018 IPR009050 Globin-like superfamily AMIS_54390 8a32e030a409f45dcfd4b836465e27e9 339 Gene3D G3DSA:1.10.1240.10 10 83 8.0E-10 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMIS_54390 8a32e030a409f45dcfd4b836465e27e9 339 Gene3D G3DSA:3.40.50.280 90 207 4.1E-26 T 14-10-2018 AMIS_74980 aec4f7ce69ae78d305772d3e102a52f2 293 Gene3D G3DSA:3.30.540.10 27 167 1.9E-19 T 14-10-2018 AMIS_74980 aec4f7ce69ae78d305772d3e102a52f2 293 Gene3D G3DSA:3.40.190.80 174 291 1.6E-19 T 14-10-2018 AMIS_74980 aec4f7ce69ae78d305772d3e102a52f2 293 SUPERFAMILY SSF56655 28 291 7.2E-46 T 14-10-2018 AMIS_74980 aec4f7ce69ae78d305772d3e102a52f2 293 Pfam PF00459 Inositol monophosphatase family 53 289 5.3E-27 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMIS_74980 aec4f7ce69ae78d305772d3e102a52f2 293 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 110 122 - T 14-10-2018 IPR020583 Inositol monophosphatase, metal-binding site AMIS_59160 56062a97095a7b5aa30b34590250e12b 667 SUPERFAMILY SSF48371 70 583 3.84E-13 T 14-10-2018 IPR016024 Armadillo-type fold AMIS_59160 56062a97095a7b5aa30b34590250e12b 667 Gene3D G3DSA:1.25.10.10 283 602 1.2E-5 T 14-10-2018 IPR011989 Armadillo-like helical AMIS_620 f1db6b834445deb09c57b7451ec8dc4f 180 SUPERFAMILY SSF53271 9 160 3.83E-18 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like AMIS_620 f1db6b834445deb09c57b7451ec8dc4f 180 Pfam PF00156 Phosphoribosyl transferase domain 36 135 3.3E-6 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AMIS_620 f1db6b834445deb09c57b7451ec8dc4f 180 Gene3D G3DSA:3.40.50.2020 2 164 8.2E-23 T 14-10-2018 AMIS_17400 a11bbbb2b2109b462bcb18ec5c3e779a 167 Pfam PF00440 Bacterial regulatory proteins, tetR family 3 46 1.9E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_17400 a11bbbb2b2109b462bcb18ec5c3e779a 167 SUPERFAMILY SSF46689 2 58 9.48E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_17400 a11bbbb2b2109b462bcb18ec5c3e779a 167 Gene3D G3DSA:1.10.357.10 1 167 9.5E-29 T 14-10-2018 AMIS_17400 a11bbbb2b2109b462bcb18ec5c3e779a 167 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 3 16 4.0E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_17400 a11bbbb2b2109b462bcb18ec5c3e779a 167 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 46 4.0E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_17400 a11bbbb2b2109b462bcb18ec5c3e779a 167 SUPERFAMILY SSF48498 62 162 8.9E-7 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_64530 aa32d99a1c30c2dca7b8d524f3ab14fd 937 Gene3D G3DSA:1.10.10.10 802 937 4.4E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_64530 aa32d99a1c30c2dca7b8d524f3ab14fd 937 SMART SM00421 876 933 8.6E-23 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_64530 aa32d99a1c30c2dca7b8d524f3ab14fd 937 SUPERFAMILY SSF48452 480 664 8.22E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_64530 aa32d99a1c30c2dca7b8d524f3ab14fd 937 SUPERFAMILY SSF46894 861 934 1.19E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_64530 aa32d99a1c30c2dca7b8d524f3ab14fd 937 Pfam PF00196 Bacterial regulatory proteins, luxR family 878 931 1.7E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_64530 aa32d99a1c30c2dca7b8d524f3ab14fd 937 ProSitePatterns PS00622 LuxR-type HTH domain signature. 893 920 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_64530 aa32d99a1c30c2dca7b8d524f3ab14fd 937 Gene3D G3DSA:1.25.40.10 380 713 6.0E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_64530 aa32d99a1c30c2dca7b8d524f3ab14fd 937 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 879 893 4.6E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_64530 aa32d99a1c30c2dca7b8d524f3ab14fd 937 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 893 909 4.6E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_64530 aa32d99a1c30c2dca7b8d524f3ab14fd 937 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 909 921 4.6E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_64530 aa32d99a1c30c2dca7b8d524f3ab14fd 937 Pfam PF13191 AAA ATPase domain 9 149 1.2E-20 T 14-10-2018 AMIS_64530 aa32d99a1c30c2dca7b8d524f3ab14fd 937 SUPERFAMILY SSF52540 8 233 1.13E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_41450 805dd15dba6e14ae1ff4bc0108a38ec2 222 SUPERFAMILY SSF46894 150 218 4.76E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_41450 805dd15dba6e14ae1ff4bc0108a38ec2 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 188 200 2.1E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_41450 805dd15dba6e14ae1ff4bc0108a38ec2 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 158 172 2.1E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_41450 805dd15dba6e14ae1ff4bc0108a38ec2 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 188 2.1E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_41450 805dd15dba6e14ae1ff4bc0108a38ec2 222 Pfam PF00196 Bacterial regulatory proteins, luxR family 157 212 3.3E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_41450 805dd15dba6e14ae1ff4bc0108a38ec2 222 SMART SM00448 5 120 3.1E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_41450 805dd15dba6e14ae1ff4bc0108a38ec2 222 Pfam PF00072 Response regulator receiver domain 7 121 1.4E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_41450 805dd15dba6e14ae1ff4bc0108a38ec2 222 SMART SM00421 155 212 2.2E-22 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_41450 805dd15dba6e14ae1ff4bc0108a38ec2 222 ProSitePatterns PS00622 LuxR-type HTH domain signature. 172 199 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_41450 805dd15dba6e14ae1ff4bc0108a38ec2 222 SUPERFAMILY SSF52172 5 131 1.42E-33 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_41450 805dd15dba6e14ae1ff4bc0108a38ec2 222 Gene3D G3DSA:3.40.50.12740 5 218 3.3E-64 T 14-10-2018 AMIS_47990 0f66f0922004d0328af28cacfe1bb69f 276 Pfam PF13460 NAD(P)H-binding 6 181 2.3E-13 T 14-10-2018 IPR016040 NAD(P)-binding domain AMIS_47990 0f66f0922004d0328af28cacfe1bb69f 276 Gene3D G3DSA:3.90.25.10 132 251 2.2E-46 T 14-10-2018 AMIS_47990 0f66f0922004d0328af28cacfe1bb69f 276 Gene3D G3DSA:3.40.50.720 3 252 2.2E-46 T 14-10-2018 AMIS_47990 0f66f0922004d0328af28cacfe1bb69f 276 SUPERFAMILY SSF51735 3 243 7.11E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_22190 d1db638db034cb3fa537210cf272e416 655 Gene3D G3DSA:1.10.287.950 337 655 2.3E-64 T 14-10-2018 AMIS_22190 d1db638db034cb3fa537210cf272e416 655 Pfam PF00672 HAMP domain 338 386 1.8E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_22190 d1db638db034cb3fa537210cf272e416 655 Gene3D G3DSA:3.30.450.20 64 212 3.2E-59 T 14-10-2018 AMIS_22190 d1db638db034cb3fa537210cf272e416 655 Pfam PF02743 Cache domain 65 301 2.1E-12 T 14-10-2018 IPR033479 Double Cache domain 1 AMIS_22190 d1db638db034cb3fa537210cf272e416 655 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 428 457 9.6E-8 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_22190 d1db638db034cb3fa537210cf272e416 655 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 575 604 9.6E-8 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_22190 d1db638db034cb3fa537210cf272e416 655 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 527 556 9.6E-8 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_22190 d1db638db034cb3fa537210cf272e416 655 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 460 621 1.3E-30 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_22190 d1db638db034cb3fa537210cf272e416 655 Gene3D G3DSA:3.30.450.20 56 308 3.2E-59 T 14-10-2018 AMIS_22190 d1db638db034cb3fa537210cf272e416 655 SMART SM00283 407 654 1.0E-46 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_22190 d1db638db034cb3fa537210cf272e416 655 SMART SM00304 338 392 2.2E-15 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_22190 d1db638db034cb3fa537210cf272e416 655 SUPERFAMILY SSF58104 360 653 4.97E-60 T 14-10-2018 AMIS_27020 8a561a1b414af305de90ead4b3058391 527 Gene3D G3DSA:3.30.410.40 162 459 2.7E-135 T 14-10-2018 AMIS_27020 8a561a1b414af305de90ead4b3058391 527 PIRSF PIRSF000137 10 325 3.3E-71 T 14-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AMIS_27020 8a561a1b414af305de90ead4b3058391 527 PIRSF PIRSF000137 361 527 1.1E-23 T 14-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AMIS_27020 8a561a1b414af305de90ead4b3058391 527 SUPERFAMILY SSF54373 330 465 6.57E-13 T 14-10-2018 AMIS_27020 8a561a1b414af305de90ead4b3058391 527 Pfam PF00732 GMC oxidoreductase 16 308 6.6E-66 T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AMIS_27020 8a561a1b414af305de90ead4b3058391 527 Gene3D G3DSA:3.50.50.60 16 520 2.7E-135 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_27020 8a561a1b414af305de90ead4b3058391 527 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 94 117 - T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AMIS_27020 8a561a1b414af305de90ead4b3058391 527 TIGRFAM TIGR03970 Rv0697: dehydrogenase, Rv0697 family 16 521 7.9E-122 T 14-10-2018 IPR023978 Glucose-methanol-choline oxidoreductase, actinobacteria AMIS_27020 8a561a1b414af305de90ead4b3058391 527 Pfam PF05199 GMC oxidoreductase 378 516 1.0E-24 T 14-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 AMIS_27020 8a561a1b414af305de90ead4b3058391 527 SUPERFAMILY SSF51905 14 526 7.34E-63 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_37520 9bf85a76df9e142815a2d5295bdf6742 206 Pfam PF12277 Protein of unknown function (DUF3618) 111 156 9.0E-10 T 14-10-2018 IPR022062 Protein of unknown function DUF3618 AMIS_30180 d824c34aba93e3974e935fc86ca036b8 182 Pfam PF14081 Domain of unknown function (DUF4262) 32 154 4.4E-35 T 14-10-2018 IPR025358 Protein of unknown function DUF4262 AMIS_32930 c02a80a03e6e398cf2467a76988e3b4d 439 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 324 6.2E-53 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMIS_32930 c02a80a03e6e398cf2467a76988e3b4d 439 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 296 303 2.7E-10 T 14-10-2018 AMIS_32930 c02a80a03e6e398cf2467a76988e3b4d 439 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 2.7E-10 T 14-10-2018 AMIS_32930 c02a80a03e6e398cf2467a76988e3b4d 439 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 159 184 2.7E-10 T 14-10-2018 AMIS_32930 c02a80a03e6e398cf2467a76988e3b4d 439 SUPERFAMILY SSF51905 157 337 1.08E-23 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_32930 c02a80a03e6e398cf2467a76988e3b4d 439 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 1.5E-13 T 14-10-2018 AMIS_32930 c02a80a03e6e398cf2467a76988e3b4d 439 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.5E-13 T 14-10-2018 AMIS_32930 c02a80a03e6e398cf2467a76988e3b4d 439 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 159 177 1.5E-13 T 14-10-2018 AMIS_32930 c02a80a03e6e398cf2467a76988e3b4d 439 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 281 303 1.5E-13 T 14-10-2018 AMIS_32930 c02a80a03e6e398cf2467a76988e3b4d 439 Gene3D G3DSA:3.50.50.100 4 401 6.9E-110 T 14-10-2018 AMIS_32930 c02a80a03e6e398cf2467a76988e3b4d 439 SUPERFAMILY SSF51905 5 184 9.36E-34 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_13920 b5a777550b66e68657ce8aa5f1dbdfb7 363 PIRSF PIRSF006487 1 363 4.2E-85 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 AMIS_13920 b5a777550b66e68657ce8aa5f1dbdfb7 363 Gene3D G3DSA:3.30.70.1400 57 143 4.8E-75 T 14-10-2018 AMIS_13920 b5a777550b66e68657ce8aa5f1dbdfb7 363 Hamap MF_00259 Aminomethyltransferase [gcvT]. 4 360 40.684 T 14-10-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AMIS_13920 b5a777550b66e68657ce8aa5f1dbdfb7 363 Gene3D G3DSA:2.40.30.110 279 363 3.1E-25 T 14-10-2018 AMIS_13920 b5a777550b66e68657ce8aa5f1dbdfb7 363 SUPERFAMILY SSF101790 270 361 3.11E-24 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal AMIS_13920 b5a777550b66e68657ce8aa5f1dbdfb7 363 Pfam PF01571 Aminomethyltransferase folate-binding domain 10 256 1.8E-81 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain AMIS_13920 b5a777550b66e68657ce8aa5f1dbdfb7 363 Gene3D G3DSA:4.10.1250.10 236 275 6.1E-12 T 14-10-2018 AMIS_13920 b5a777550b66e68657ce8aa5f1dbdfb7 363 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 264 355 7.6E-23 T 14-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AMIS_13920 b5a777550b66e68657ce8aa5f1dbdfb7 363 Gene3D G3DSA:3.30.1360.120 9 232 4.8E-75 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 AMIS_13920 b5a777550b66e68657ce8aa5f1dbdfb7 363 SUPERFAMILY SSF103025 5 277 4.55E-86 T 14-10-2018 AMIS_13920 b5a777550b66e68657ce8aa5f1dbdfb7 363 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 6 359 7.5E-95 T 14-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 AMIS_27510 964df1d9dc3cae68c5f66ab39f44d397 215 Gene3D G3DSA:1.20.120.450 4 180 3.7E-10 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes AMIS_27510 964df1d9dc3cae68c5f66ab39f44d397 215 Pfam PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain 17 110 3.5E-10 T 14-10-2018 IPR024344 Mycothiol-dependent maleylpyruvate isomerase, metal-binding domain GO:0046872 AMIS_27510 964df1d9dc3cae68c5f66ab39f44d397 215 TIGRFAM TIGR03083 TIGR03083: uncharacterized Actinobacterial protein TIGR03083 14 193 7.0E-26 T 14-10-2018 IPR017517 Conserved hypothetical protein CHP03083, actinobacterial-type AMIS_27510 964df1d9dc3cae68c5f66ab39f44d397 215 SUPERFAMILY SSF109854 17 128 2.62E-16 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes AMIS_39590 51155518e2ca4e49d5a87b44cb1a1e99 482 Pfam PF02233 NAD(P) transhydrogenase beta subunit 8 470 5.0E-196 T 14-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 AMIS_39590 51155518e2ca4e49d5a87b44cb1a1e99 482 SUPERFAMILY SSF52467 299 473 6.65E-73 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AMIS_39590 51155518e2ca4e49d5a87b44cb1a1e99 482 PIRSF PIRSF000204 2 474 5.1E-209 T 14-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 AMIS_39590 51155518e2ca4e49d5a87b44cb1a1e99 482 Gene3D G3DSA:3.40.50.1220 296 477 4.9E-84 T 14-10-2018 AMIS_77580 f81e7337f17a9bb2f1fe2c31c4d70850 235 Gene3D G3DSA:3.40.50.150 9 199 2.5E-37 T 14-10-2018 AMIS_77580 f81e7337f17a9bb2f1fe2c31c4d70850 235 Pfam PF08241 Methyltransferase domain 51 140 4.2E-20 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 AMIS_77580 f81e7337f17a9bb2f1fe2c31c4d70850 235 SUPERFAMILY SSF53335 4 206 3.44E-36 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_33030 39db777268f1aebae61da8122544a30f 255 Gene3D G3DSA:3.40.50.300 2 238 5.8E-62 T 14-10-2018 AMIS_33030 39db777268f1aebae61da8122544a30f 255 SMART SM00382 33 214 5.1E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_33030 39db777268f1aebae61da8122544a30f 255 SUPERFAMILY SSF52540 5 232 3.55E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_33030 39db777268f1aebae61da8122544a30f 255 Pfam PF00005 ABC transporter 24 165 1.0E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_33030 39db777268f1aebae61da8122544a30f 255 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_17140 9a57456b78fa5ba68fe8bb0b5822a907 124 SMART SM00448 2 115 3.3E-40 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_17140 9a57456b78fa5ba68fe8bb0b5822a907 124 Pfam PF00072 Response regulator receiver domain 4 116 7.1E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_17140 9a57456b78fa5ba68fe8bb0b5822a907 124 SUPERFAMILY SSF52172 3 123 2.85E-40 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_17140 9a57456b78fa5ba68fe8bb0b5822a907 124 Gene3D G3DSA:3.40.50.12740 2 124 1.9E-43 T 14-10-2018 AMIS_13430 338ec7a9df4a9dccfa69e4ca7847b138 265 SUPERFAMILY SSF53335 4 253 3.84E-43 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_13430 338ec7a9df4a9dccfa69e4ca7847b138 265 Pfam PF13847 Methyltransferase domain 33 146 1.3E-25 T 14-10-2018 IPR025714 Methyltransferase domain AMIS_13430 338ec7a9df4a9dccfa69e4ca7847b138 265 Gene3D G3DSA:3.40.50.150 1 249 9.2E-41 T 14-10-2018 AMIS_37080 5f104f2a912f9d5ee210d928ebd59503 333 SMART SM01230 85 328 1.3E-52 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMIS_37080 5f104f2a912f9d5ee210d928ebd59503 333 SUPERFAMILY SSF55931 85 330 9.81E-64 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AMIS_37080 5f104f2a912f9d5ee210d928ebd59503 333 Gene3D G3DSA:3.10.20.70 1 85 5.1E-31 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMIS_37080 5f104f2a912f9d5ee210d928ebd59503 333 SUPERFAMILY SSF54368 5 85 9.94E-13 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMIS_37080 5f104f2a912f9d5ee210d928ebd59503 333 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 216 232 - T 14-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AMIS_37080 5f104f2a912f9d5ee210d928ebd59503 333 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 4 76 1.1E-14 T 14-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AMIS_37080 5f104f2a912f9d5ee210d928ebd59503 333 ProSitePatterns PS00180 Glutamine synthetase signature 1. 37 54 - T 14-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AMIS_37080 5f104f2a912f9d5ee210d928ebd59503 333 Pfam PF00120 Glutamine synthetase, catalytic domain 88 235 8.1E-15 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMIS_37080 5f104f2a912f9d5ee210d928ebd59503 333 Gene3D G3DSA:3.30.590.40 86 333 1.9E-117 T 14-10-2018 AMIS_31170 70ff1e74a5848db34ead3c09294326bc 213 Gene3D G3DSA:3.40.50.150 9 200 5.0E-30 T 14-10-2018 AMIS_31170 70ff1e74a5848db34ead3c09294326bc 213 SUPERFAMILY SSF53335 33 163 6.84E-32 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_31170 70ff1e74a5848db34ead3c09294326bc 213 Pfam PF08241 Methyltransferase domain 61 155 7.3E-22 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 AMIS_7990 ccca74813552abb6b4da8b73ebacada7 383 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 195 209 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AMIS_7990 ccca74813552abb6b4da8b73ebacada7 383 SUPERFAMILY SSF53383 9 382 1.77E-119 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_7990 ccca74813552abb6b4da8b73ebacada7 383 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 9 382 1.4E-143 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AMIS_7990 ccca74813552abb6b4da8b73ebacada7 383 Gene3D G3DSA:3.90.1150.10 254 383 6.5E-51 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMIS_7990 ccca74813552abb6b4da8b73ebacada7 383 Gene3D G3DSA:3.40.640.10 1 253 8.5E-98 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_7990 ccca74813552abb6b4da8b73ebacada7 383 PIRSF PIRSF001434 1 383 1.6E-142 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AMIS_77420 50ee558956c97f044e7d84107a924554 357 Pfam PF06271 RDD family 168 329 4.2E-26 T 14-10-2018 IPR010432 RDD AMIS_77420 50ee558956c97f044e7d84107a924554 357 PRINTS PR01217 Proline rich extensin signature 68 80 4.8E-9 T 14-10-2018 AMIS_77420 50ee558956c97f044e7d84107a924554 357 PRINTS PR01217 Proline rich extensin signature 106 122 4.8E-9 T 14-10-2018 AMIS_77420 50ee558956c97f044e7d84107a924554 357 PRINTS PR01217 Proline rich extensin signature 41 57 4.8E-9 T 14-10-2018 AMIS_77420 50ee558956c97f044e7d84107a924554 357 PRINTS PR01217 Proline rich extensin signature 81 102 4.8E-9 T 14-10-2018 AMIS_28550 6e4d0fe55787465c7a14f856e439f882 147 SUPERFAMILY SSF46785 19 139 8.28E-29 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_28550 6e4d0fe55787465c7a14f856e439f882 147 Gene3D G3DSA:1.10.10.10 3 140 2.4E-43 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_28550 6e4d0fe55787465c7a14f856e439f882 147 Pfam PF01638 HxlR-like helix-turn-helix 33 128 7.8E-24 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type AMIS_16780 0159346ec78dbfe2684b8f60a1d7af7b 467 Pfam PF00392 Bacterial regulatory proteins, gntR family 23 80 1.8E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_16780 0159346ec78dbfe2684b8f60a1d7af7b 467 Gene3D G3DSA:3.40.640.10 108 457 1.2E-100 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_16780 0159346ec78dbfe2684b8f60a1d7af7b 467 Gene3D G3DSA:1.10.10.10 18 104 8.0E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_16780 0159346ec78dbfe2684b8f60a1d7af7b 467 SUPERFAMILY SSF53383 114 464 7.78E-77 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_16780 0159346ec78dbfe2684b8f60a1d7af7b 467 Pfam PF00155 Aminotransferase class I and II 115 458 4.1E-16 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMIS_16780 0159346ec78dbfe2684b8f60a1d7af7b 467 SMART SM00345 21 80 2.1E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_16780 0159346ec78dbfe2684b8f60a1d7af7b 467 SUPERFAMILY SSF46785 13 88 7.9E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_50600 364e82bd3fabe65a6c0acc82a5383dcf 269 SUPERFAMILY SSF53335 38 258 3.53E-41 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_50600 364e82bd3fabe65a6c0acc82a5383dcf 269 Gene3D G3DSA:2.20.130.10 178 236 3.2E-80 T 14-10-2018 AMIS_50600 364e82bd3fabe65a6c0acc82a5383dcf 269 Gene3D G3DSA:3.40.50.150 42 251 3.2E-80 T 14-10-2018 AMIS_50600 364e82bd3fabe65a6c0acc82a5383dcf 269 Pfam PF13649 Methyltransferase domain 75 165 7.7E-19 T 14-10-2018 AMIS_15450 b9100545c699cdeacdea3400c838e40f 221 SUPERFAMILY SSF52317 16 217 2.64E-52 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_15450 b9100545c699cdeacdea3400c838e40f 221 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 17 219 32.286 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 AMIS_15450 b9100545c699cdeacdea3400c838e40f 221 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 18 217 1.8E-62 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 AMIS_15450 b9100545c699cdeacdea3400c838e40f 221 Pfam PF00117 Glutamine amidotransferase class-I 20 208 1.6E-18 T 14-10-2018 IPR017926 Glutamine amidotransferase AMIS_15450 b9100545c699cdeacdea3400c838e40f 221 SMART SM01211 15 220 4.6E-4 T 14-10-2018 AMIS_15450 b9100545c699cdeacdea3400c838e40f 221 PIRSF PIRSF000495 16 220 1.5E-63 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 AMIS_15450 b9100545c699cdeacdea3400c838e40f 221 Gene3D G3DSA:3.40.50.880 13 219 2.0E-66 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_64950 853072cb060ed108972c549f327af337 275 SUPERFAMILY SSF52540 8 230 1.41E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_64950 853072cb060ed108972c549f327af337 275 SMART SM00382 34 224 2.1E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_64950 853072cb060ed108972c549f327af337 275 Gene3D G3DSA:3.40.50.300 5 241 8.8E-51 T 14-10-2018 AMIS_64950 853072cb060ed108972c549f327af337 275 Pfam PF00005 ABC transporter 26 176 4.1E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_43380 ecac989974cc9e5fdea5909919d54e08 362 TIGRFAM TIGR00374 TIGR00374: TIGR00374 family protein 248 351 2.0E-14 T 14-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD AMIS_43380 ecac989974cc9e5fdea5909919d54e08 362 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 33 341 8.1E-26 T 14-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD AMIS_28680 cf330963b6cde1ac4ae55cff5ffc7bc7 171 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 20 128 4.4E-9 T 14-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD AMIS_37960 ed2a6dd78061a61172b30a6d76e3e91f 524 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 286 315 3.6E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_37960 ed2a6dd78061a61172b30a6d76e3e91f 524 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 3.6E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_37960 ed2a6dd78061a61172b30a6d76e3e91f 524 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 367 394 3.6E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_37960 ed2a6dd78061a61172b30a6d76e3e91f 524 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 444 473 3.6E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_37960 ed2a6dd78061a61172b30a6d76e3e91f 524 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 329 493 1.5E-32 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_37960 ed2a6dd78061a61172b30a6d76e3e91f 524 Pfam PF00672 HAMP domain 209 257 2.3E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_37960 ed2a6dd78061a61172b30a6d76e3e91f 524 SMART SM00283 269 523 5.5E-52 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_37960 ed2a6dd78061a61172b30a6d76e3e91f 524 SMART SM00304 209 261 1.8E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_37960 ed2a6dd78061a61172b30a6d76e3e91f 524 SUPERFAMILY SSF58104 229 523 3.66E-62 T 14-10-2018 AMIS_37960 ed2a6dd78061a61172b30a6d76e3e91f 524 Gene3D G3DSA:1.10.287.950 208 524 2.0E-63 T 14-10-2018 AMIS_49950 192d505b6e79850e1c37c81340658119 315 Pfam PF00775 Dioxygenase 111 185 2.9E-8 T 14-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 AMIS_49950 192d505b6e79850e1c37c81340658119 315 SUPERFAMILY SSF49482 62 278 3.53E-39 T 14-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AMIS_49950 192d505b6e79850e1c37c81340658119 315 Gene3D G3DSA:2.60.130.10 48 252 1.4E-30 T 14-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AMIS_17070 d246c37b1c8d9344b3395805d76899ee 870 SUPERFAMILY SSF48208 417 867 1.19E-41 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AMIS_17070 d246c37b1c8d9344b3395805d76899ee 870 Gene3D G3DSA:1.50.10.10 682 869 5.2E-31 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 AMIS_17070 d246c37b1c8d9344b3395805d76899ee 870 Gene3D G3DSA:1.50.10.10 404 652 2.1E-33 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 AMIS_53990 1318db95d0e4b1ba2ed6bbf3366f1e0b 435 Pfam PF07687 Peptidase dimerisation domain 195 331 4.8E-15 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain AMIS_53990 1318db95d0e4b1ba2ed6bbf3366f1e0b 435 PIRSF PIRSF036696 1 247 1.2E-29 T 14-10-2018 AMIS_53990 1318db95d0e4b1ba2ed6bbf3366f1e0b 435 PIRSF PIRSF036696 278 435 2.9E-9 T 14-10-2018 AMIS_53990 1318db95d0e4b1ba2ed6bbf3366f1e0b 435 Gene3D G3DSA:3.40.630.10 3 201 7.9E-50 T 14-10-2018 AMIS_53990 1318db95d0e4b1ba2ed6bbf3366f1e0b 435 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 77 86 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AMIS_53990 1318db95d0e4b1ba2ed6bbf3366f1e0b 435 SUPERFAMILY SSF55031 198 330 6.85E-12 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AMIS_53990 1318db95d0e4b1ba2ed6bbf3366f1e0b 435 Pfam PF01546 Peptidase family M20/M25/M40 78 434 1.4E-38 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 AMIS_53990 1318db95d0e4b1ba2ed6bbf3366f1e0b 435 SUPERFAMILY SSF53187 6 434 5.14E-56 T 14-10-2018 AMIS_9730 bc2e07f9d9923bc76f770b21695a520d 188 Pfam PF08281 Sigma-70, region 4 122 172 1.8E-15 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_9730 bc2e07f9d9923bc76f770b21695a520d 188 TIGRFAM TIGR02983 SigE-fam_strep: RNA polymerase sigma-70 factor, sigma-E family 22 176 2.5E-44 T 14-10-2018 IPR014325 RNA polymerase sigma-E factor, actinobacteria GO:0016987 AMIS_9730 bc2e07f9d9923bc76f770b21695a520d 188 Gene3D G3DSA:1.10.1740.10 19 116 1.4E-10 T 14-10-2018 AMIS_9730 bc2e07f9d9923bc76f770b21695a520d 188 Pfam PF04542 Sigma-70 region 2 29 96 4.1E-13 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_9730 bc2e07f9d9923bc76f770b21695a520d 188 SUPERFAMILY SSF88659 119 176 1.12E-13 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_9730 bc2e07f9d9923bc76f770b21695a520d 188 SUPERFAMILY SSF88946 23 101 5.1E-16 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_9730 bc2e07f9d9923bc76f770b21695a520d 188 Gene3D G3DSA:1.10.10.10 118 178 1.4E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_9730 bc2e07f9d9923bc76f770b21695a520d 188 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 25 175 5.8E-19 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_79740 117bb2197be27cbd47173590c72871aa 348 SUPERFAMILY SSF53474 141 275 9.29E-10 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_79740 117bb2197be27cbd47173590c72871aa 348 Pfam PF06259 Alpha/beta hydrolase 118 295 1.6E-45 T 14-10-2018 IPR010427 Protein of unknown function DUF1023 AMIS_79740 117bb2197be27cbd47173590c72871aa 348 Gene3D G3DSA:3.40.50.1820 139 314 3.5E-7 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_65910 082229d01205d63c546d34d5cbd8b40a 290 Gene3D G3DSA:1.10.3720.10 10 280 1.7E-59 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_65910 082229d01205d63c546d34d5cbd8b40a 290 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 280 2.3E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_65910 082229d01205d63c546d34d5cbd8b40a 290 SUPERFAMILY SSF161098 16 290 3.4E-63 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_78480 f37073a7e41ad6d0f708fd05e08dee2b 579 SUPERFAMILY SSF53850 43 573 3.98E-89 T 14-10-2018 AMIS_78480 f37073a7e41ad6d0f708fd05e08dee2b 579 Gene3D G3DSA:3.40.190.10 19 318 4.1E-53 T 14-10-2018 AMIS_78480 f37073a7e41ad6d0f708fd05e08dee2b 579 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 92 487 1.2E-67 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain AMIS_78480 f37073a7e41ad6d0f708fd05e08dee2b 579 PIRSF PIRSF002741 13 573 2.8E-55 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AMIS_78480 f37073a7e41ad6d0f708fd05e08dee2b 579 Gene3D G3DSA:3.10.105.10 319 547 1.2E-63 T 14-10-2018 AMIS_12900 8ef3cfc5975a9ed31b9aa4908136e8b3 596 SUPERFAMILY SSF56300 39 370 6.15E-78 T 14-10-2018 AMIS_12900 8ef3cfc5975a9ed31b9aa4908136e8b3 596 SUPERFAMILY SSF55816 368 578 2.75E-38 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMIS_12900 8ef3cfc5975a9ed31b9aa4908136e8b3 596 Gene3D G3DSA:3.90.780.10 371 583 8.1E-55 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMIS_12900 8ef3cfc5975a9ed31b9aa4908136e8b3 596 Pfam PF02872 5'-nucleotidase, C-terminal domain 371 547 9.9E-27 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMIS_12900 8ef3cfc5975a9ed31b9aa4908136e8b3 596 PRINTS PR01607 Apyrase family signature 43 61 2.5E-20 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMIS_12900 8ef3cfc5975a9ed31b9aa4908136e8b3 596 PRINTS PR01607 Apyrase family signature 434 457 2.5E-20 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMIS_12900 8ef3cfc5975a9ed31b9aa4908136e8b3 596 PRINTS PR01607 Apyrase family signature 524 543 2.5E-20 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMIS_12900 8ef3cfc5975a9ed31b9aa4908136e8b3 596 PRINTS PR01607 Apyrase family signature 241 258 2.5E-20 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMIS_12900 8ef3cfc5975a9ed31b9aa4908136e8b3 596 PRINTS PR01607 Apyrase family signature 306 326 2.5E-20 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMIS_12900 8ef3cfc5975a9ed31b9aa4908136e8b3 596 PRINTS PR01607 Apyrase family signature 273 296 2.5E-20 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMIS_12900 8ef3cfc5975a9ed31b9aa4908136e8b3 596 Pfam PF00149 Calcineurin-like phosphoesterase 45 290 1.2E-10 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AMIS_12900 8ef3cfc5975a9ed31b9aa4908136e8b3 596 ProSitePatterns PS00786 5'-nucleotidase signature 2. 138 149 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMIS_12900 8ef3cfc5975a9ed31b9aa4908136e8b3 596 Gene3D G3DSA:3.60.21.10 39 370 8.9E-97 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like AMIS_79350 ab97628943cb917d7c9f184412ab6d99 682 Pfam PF13191 AAA ATPase domain 23 109 3.0E-9 T 14-10-2018 AMIS_79350 ab97628943cb917d7c9f184412ab6d99 682 SUPERFAMILY SSF52540 19 204 1.25E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_79350 ab97628943cb917d7c9f184412ab6d99 682 Gene3D G3DSA:3.40.50.300 13 125 3.2E-10 T 14-10-2018 AMIS_71640 15e7275f1b97aff920844411c542bc79 557 SUPERFAMILY SSF51703 7 551 1.12E-190 T 14-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 AMIS_71640 15e7275f1b97aff920844411c542bc79 557 Gene3D G3DSA:3.20.20.240 2 557 3.9E-224 T 14-10-2018 AMIS_71640 15e7275f1b97aff920844411c542bc79 557 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 27 556 5.7E-202 T 14-10-2018 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 AMIS_71640 15e7275f1b97aff920844411c542bc79 557 Pfam PF01642 Methylmalonyl-CoA mutase 28 549 3.3E-211 T 14-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 AMIS_28830 36be29cec94b389b0fddd1751ca71414 153 SMART SM00448 14 136 2.2E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_28830 36be29cec94b389b0fddd1751ca71414 153 Pfam PF00072 Response regulator receiver domain 16 135 5.3E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_28830 36be29cec94b389b0fddd1751ca71414 153 Gene3D G3DSA:3.40.50.2300 4 151 5.3E-33 T 14-10-2018 AMIS_28830 36be29cec94b389b0fddd1751ca71414 153 SUPERFAMILY SSF52172 14 143 6.55E-32 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_29780 b0f51bfc6bd02a2340894f6cc94e284c 196 Gene3D G3DSA:1.20.1290.10 14 179 8.8E-33 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AMIS_29780 b0f51bfc6bd02a2340894f6cc94e284c 196 SUPERFAMILY SSF69118 2 173 4.08E-39 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AMIS_29780 b0f51bfc6bd02a2340894f6cc94e284c 196 TIGRFAM TIGR01926 peroxid_rel: uncharacterized peroxidase-related enzyme 6 170 1.1E-25 T 14-10-2018 IPR010195 Uncharacterised peroxidase-related AMIS_29780 b0f51bfc6bd02a2340894f6cc94e284c 196 Pfam PF02627 Carboxymuconolactone decarboxylase family 40 89 1.7E-8 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AMIS_23910 c8d1d46e7c161919eb351c9087f84a9b 357 Gene3D G3DSA:3.10.580.10 200 342 4.3E-27 T 14-10-2018 AMIS_23910 c8d1d46e7c161919eb351c9087f84a9b 357 Pfam PF00571 CBS domain 281 331 1.8E-6 T 14-10-2018 IPR000644 CBS domain AMIS_23910 c8d1d46e7c161919eb351c9087f84a9b 357 Pfam PF01595 Domain of unknown function DUF21 8 201 1.3E-41 T 14-10-2018 IPR002550 CNNM, transmembrane domain AMIS_23910 c8d1d46e7c161919eb351c9087f84a9b 357 SUPERFAMILY SSF54631 216 347 2.12E-19 T 14-10-2018 AMIS_47920 179871d20cb505bbf12547ad35a85b36 268 Pfam PF11611 Domain of unknown function (DUF4352) 138 260 7.1E-20 T 14-10-2018 IPR029051 Domain of unknown function DUF4352 AMIS_47920 179871d20cb505bbf12547ad35a85b36 268 Gene3D G3DSA:2.60.40.1240 132 254 1.4E-16 T 14-10-2018 IPR029050 Immunoprotective extracellular, immunoglobulin-like domain superfamily AMIS_44300 ed043811afe29e9aed0f6ec3ced39115 196 Pfam PF12464 Maltose acetyltransferase 10 60 1.2E-9 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 AMIS_44300 ed043811afe29e9aed0f6ec3ced39115 196 Gene3D G3DSA:2.160.10.10 4 193 3.4E-64 T 14-10-2018 AMIS_44300 ed043811afe29e9aed0f6ec3ced39115 196 SUPERFAMILY SSF51161 7 190 1.08E-50 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily AMIS_44300 ed043811afe29e9aed0f6ec3ced39115 196 SMART SM01266 7 61 3.2E-14 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 AMIS_44300 ed043811afe29e9aed0f6ec3ced39115 196 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 132 167 1.4E-9 T 14-10-2018 IPR001451 Hexapeptide repeat AMIS_44300 ed043811afe29e9aed0f6ec3ced39115 196 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 141 169 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AMIS_24570 eb1ccc7813a6c162f36fa00d479c0092 525 PIRSF PIRSF002741 10 522 3.4E-76 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AMIS_24570 eb1ccc7813a6c162f36fa00d479c0092 525 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 93 115 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site AMIS_24570 eb1ccc7813a6c162f36fa00d479c0092 525 Gene3D G3DSA:3.10.105.10 278 498 2.5E-101 T 14-10-2018 AMIS_24570 eb1ccc7813a6c162f36fa00d479c0092 525 Gene3D G3DSA:3.90.76.10 56 202 2.5E-101 T 14-10-2018 AMIS_24570 eb1ccc7813a6c162f36fa00d479c0092 525 SUPERFAMILY SSF53850 54 523 4.16E-102 T 14-10-2018 AMIS_24570 eb1ccc7813a6c162f36fa00d479c0092 525 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 86 428 8.4E-78 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain AMIS_24570 eb1ccc7813a6c162f36fa00d479c0092 525 Gene3D G3DSA:3.40.190.10 203 502 2.5E-101 T 14-10-2018 AMIS_76020 15e8fea0dc6c82bc0af5752c902a6f19 418 ProSitePatterns PS00216 Sugar transport proteins signature 1. 69 85 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AMIS_76020 15e8fea0dc6c82bc0af5752c902a6f19 418 SUPERFAMILY SSF103473 13 402 5.49E-65 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_76020 15e8fea0dc6c82bc0af5752c902a6f19 418 Pfam PF07690 Major Facilitator Superfamily 19 318 8.6E-35 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_76020 15e8fea0dc6c82bc0af5752c902a6f19 418 Gene3D G3DSA:1.20.1250.20 12 385 2.7E-61 T 14-10-2018 AMIS_61800 e24bb47ec9a51980b45ef5bcf1728fec 454 SUPERFAMILY SSF49265 362 445 1.78E-6 T 14-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 AMIS_61800 e24bb47ec9a51980b45ef5bcf1728fec 454 Gene3D G3DSA:2.60.40.10 368 451 4.7E-10 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_61800 e24bb47ec9a51980b45ef5bcf1728fec 454 Pfam PF04389 Peptidase family M28 121 327 9.3E-28 T 14-10-2018 IPR007484 Peptidase M28 AMIS_61800 e24bb47ec9a51980b45ef5bcf1728fec 454 Gene3D G3DSA:3.40.630.10 32 367 4.8E-63 T 14-10-2018 AMIS_61800 e24bb47ec9a51980b45ef5bcf1728fec 454 SUPERFAMILY SSF53187 34 365 2.07E-50 T 14-10-2018 AMIS_71840 99dec1b4c294af708141462f0d5b4318 282 Gene3D G3DSA:1.10.1040.10 188 282 1.4E-32 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AMIS_71840 99dec1b4c294af708141462f0d5b4318 282 SUPERFAMILY SSF51735 3 181 8.0E-57 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_71840 99dec1b4c294af708141462f0d5b4318 282 Gene3D G3DSA:3.40.50.720 1 182 1.4E-66 T 14-10-2018 AMIS_71840 99dec1b4c294af708141462f0d5b4318 282 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 186 282 5.0E-30 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AMIS_71840 99dec1b4c294af708141462f0d5b4318 282 SUPERFAMILY SSF48179 186 282 5.27E-28 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMIS_71840 99dec1b4c294af708141462f0d5b4318 282 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 183 208 - T 14-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AMIS_71840 99dec1b4c294af708141462f0d5b4318 282 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 5 182 2.6E-67 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AMIS_71840 99dec1b4c294af708141462f0d5b4318 282 PIRSF PIRSF000105 1 282 1.3E-88 T 14-10-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 AMIS_15130 3813e2c29ed4419c104e3c4a80c2a9c6 406 Pfam PF08245 Mur ligase middle domain 55 260 2.7E-15 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AMIS_15130 3813e2c29ed4419c104e3c4a80c2a9c6 406 Gene3D G3DSA:3.40.1190.10 40 280 6.5E-34 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AMIS_15130 3813e2c29ed4419c104e3c4a80c2a9c6 406 SUPERFAMILY SSF53623 40 275 2.14E-30 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AMIS_15130 3813e2c29ed4419c104e3c4a80c2a9c6 406 Pfam PF08353 Domain of unknown function (DUF1727) 298 395 5.1E-20 T 14-10-2018 IPR013564 Domain of unknown function DUF1727 AMIS_41660 7b748a2fdc0c2bd2d99187375832faf1 278 SUPERFAMILY SSF50129 1 118 5.66E-24 T 14-10-2018 IPR011032 GroES-like superfamily AMIS_41660 7b748a2fdc0c2bd2d99187375832faf1 278 SMART SM00829 1 276 1.4E-10 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMIS_41660 7b748a2fdc0c2bd2d99187375832faf1 278 Pfam PF13602 Zinc-binding dehydrogenase 156 276 1.5E-19 T 14-10-2018 AMIS_41660 7b748a2fdc0c2bd2d99187375832faf1 278 Gene3D G3DSA:3.90.180.10 2 275 3.1E-73 T 14-10-2018 AMIS_41660 7b748a2fdc0c2bd2d99187375832faf1 278 Gene3D G3DSA:3.40.50.720 97 227 3.1E-73 T 14-10-2018 AMIS_41660 7b748a2fdc0c2bd2d99187375832faf1 278 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 1 60 6.5E-5 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMIS_41660 7b748a2fdc0c2bd2d99187375832faf1 278 SUPERFAMILY SSF51735 87 219 2.88E-31 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_66350 c8c9b7b7fefefe46cdf92775957a743f 1183 TIGRFAM TIGR02257 cobalto_cobN: cobaltochelatase, CobN subunit 42 1175 0.0 T 14-10-2018 IPR011953 Cobaltochelatase, CobN subunit GO:0009236|GO:0051116 AMIS_66350 c8c9b7b7fefefe46cdf92775957a743f 1183 Pfam PF02514 CobN/Magnesium Chelatase 99 1162 0.0 T 14-10-2018 IPR003672 CobN/magnesium chelatase GO:0009058 AMIS_8930 4631936c989836c8f6853a4e0d61e589 200 Pfam PF14273 Domain of unknown function (DUF4360) 37 200 2.8E-35 T 14-10-2018 IPR025649 Protein of unknown function DUF4360 AMIS_76180 ce35699ac131fd6db0926594a746b741 161 SUPERFAMILY SSF140566 4 128 5.89E-8 T 14-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 AMIS_76180 ce35699ac131fd6db0926594a746b741 161 Pfam PF05130 FlgN protein 3 147 1.6E-16 T 14-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 AMIS_22760 d6eb0133c7458a36dc45a268dee5ddba 401 SUPERFAMILY SSF103473 4 384 3.27E-47 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_22760 d6eb0133c7458a36dc45a268dee5ddba 401 Pfam PF07690 Major Facilitator Superfamily 15 227 2.4E-24 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_22760 d6eb0133c7458a36dc45a268dee5ddba 401 Gene3D G3DSA:1.20.1250.20 4 383 7.1E-45 T 14-10-2018 AMIS_10640 5d743843663f20b14e23e1ec5a5fd41d 218 Pfam PF00072 Response regulator receiver domain 9 120 1.8E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_10640 5d743843663f20b14e23e1ec5a5fd41d 218 Gene3D G3DSA:3.40.50.12740 7 213 6.2E-49 T 14-10-2018 AMIS_10640 5d743843663f20b14e23e1ec5a5fd41d 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 3.3E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_10640 5d743843663f20b14e23e1ec5a5fd41d 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 3.3E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_10640 5d743843663f20b14e23e1ec5a5fd41d 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 3.3E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_10640 5d743843663f20b14e23e1ec5a5fd41d 218 SUPERFAMILY SSF52172 6 134 1.14E-25 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_10640 5d743843663f20b14e23e1ec5a5fd41d 218 SMART SM00421 150 207 1.0E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_10640 5d743843663f20b14e23e1ec5a5fd41d 218 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 207 8.8E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_10640 5d743843663f20b14e23e1ec5a5fd41d 218 SMART SM00448 7 120 6.6E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_10640 5d743843663f20b14e23e1ec5a5fd41d 218 SUPERFAMILY SSF46894 144 214 2.28E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_73580 03d2d68047e13ad9be7b1925995a2ec1 363 SMART SM00480 39 359 0.002 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 AMIS_73580 03d2d68047e13ad9be7b1925995a2ec1 363 Pfam PF02767 DNA polymerase III beta subunit, central domain 135 244 6.7E-8 T 14-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 AMIS_73580 03d2d68047e13ad9be7b1925995a2ec1 363 ProSitePatterns PS00552 MerR-type HTH domain signature. 21 43 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_73580 03d2d68047e13ad9be7b1925995a2ec1 363 Pfam PF13411 MerR HTH family regulatory protein 20 87 9.2E-13 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_73580 03d2d68047e13ad9be7b1925995a2ec1 363 SUPERFAMILY SSF46955 19 122 1.06E-20 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily AMIS_73580 03d2d68047e13ad9be7b1925995a2ec1 363 SUPERFAMILY SSF55979 309 362 6.8E-5 T 14-10-2018 AMIS_73580 03d2d68047e13ad9be7b1925995a2ec1 363 SMART SM00422 20 88 5.6E-10 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_73580 03d2d68047e13ad9be7b1925995a2ec1 363 SUPERFAMILY SSF55979 132 245 1.36E-10 T 14-10-2018 AMIS_73580 03d2d68047e13ad9be7b1925995a2ec1 363 Gene3D G3DSA:1.10.1660.10 12 133 3.7E-19 T 14-10-2018 AMIS_73580 03d2d68047e13ad9be7b1925995a2ec1 363 Gene3D G3DSA:3.10.150.10 134 248 2.0E-16 T 14-10-2018 AMIS_79280 4f3141e7001f649a583765eb2a19c61b 385 Pfam PF00563 EAL domain 19 238 1.2E-30 T 14-10-2018 IPR001633 EAL domain AMIS_79280 4f3141e7001f649a583765eb2a19c61b 385 SUPERFAMILY SSF141868 16 246 1.18E-38 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_79280 4f3141e7001f649a583765eb2a19c61b 385 SMART SM00052 5 243 9.3E-14 T 14-10-2018 IPR001633 EAL domain AMIS_79280 4f3141e7001f649a583765eb2a19c61b 385 Gene3D G3DSA:3.20.20.450 4 249 1.7E-39 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_68330 dfb5fc3913520c9447f37b6d775224c1 387 SUPERFAMILY SSF47819 191 292 9.59E-22 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 AMIS_68330 dfb5fc3913520c9447f37b6d775224c1 387 SMART SM00341 205 285 2.3E-17 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 AMIS_68330 dfb5fc3913520c9447f37b6d775224c1 387 SUPERFAMILY SSF53098 1 203 1.31E-51 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily AMIS_68330 dfb5fc3913520c9447f37b6d775224c1 387 SMART SM00474 1 164 8.1E-35 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AMIS_68330 dfb5fc3913520c9447f37b6d775224c1 387 Gene3D G3DSA:3.30.420.10 1 188 1.8E-69 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMIS_68330 dfb5fc3913520c9447f37b6d775224c1 387 Pfam PF00570 HRDC domain 210 274 1.6E-13 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 AMIS_68330 dfb5fc3913520c9447f37b6d775224c1 387 Pfam PF01612 3'-5' exonuclease 1 164 8.3E-36 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AMIS_68330 dfb5fc3913520c9447f37b6d775224c1 387 Gene3D G3DSA:1.10.150.80 293 384 7.4E-26 T 14-10-2018 AMIS_68330 dfb5fc3913520c9447f37b6d775224c1 387 Gene3D G3DSA:1.10.150.80 189 287 1.1E-22 T 14-10-2018 AMIS_45650 bb30c0828567aa365630c407a1a348c3 155 SUPERFAMILY SSF109854 7 149 2.14E-22 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes AMIS_45650 bb30c0828567aa365630c407a1a348c3 155 Gene3D G3DSA:1.20.120.450 3 150 2.3E-18 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes AMIS_45650 bb30c0828567aa365630c407a1a348c3 155 Pfam PF04978 Protein of unknown function (DUF664) 18 149 5.2E-13 T 14-10-2018 IPR007061 Protein of unknown function DUF664 AMIS_26860 99f8c5ab88360948cbf1c001054be598 225 SUPERFAMILY SSF52172 1 139 2.13E-32 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_26860 99f8c5ab88360948cbf1c001054be598 225 SMART SM00421 154 211 2.1E-23 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_26860 99f8c5ab88360948cbf1c001054be598 225 Pfam PF00072 Response regulator receiver domain 4 120 1.2E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_26860 99f8c5ab88360948cbf1c001054be598 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 171 4.6E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_26860 99f8c5ab88360948cbf1c001054be598 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 187 4.6E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_26860 99f8c5ab88360948cbf1c001054be598 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 187 199 4.6E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_26860 99f8c5ab88360948cbf1c001054be598 225 Gene3D G3DSA:3.40.50.12740 2 217 6.1E-69 T 14-10-2018 AMIS_26860 99f8c5ab88360948cbf1c001054be598 225 SUPERFAMILY SSF46894 147 217 1.94E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_26860 99f8c5ab88360948cbf1c001054be598 225 Pfam PF00196 Bacterial regulatory proteins, luxR family 156 209 1.3E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_26860 99f8c5ab88360948cbf1c001054be598 225 SMART SM00448 2 119 4.7E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_10620 81be3db84e4dd520531e061062c5f500 195 Gene3D G3DSA:3.40.50.150 24 185 9.5E-23 T 14-10-2018 AMIS_10620 81be3db84e4dd520531e061062c5f500 195 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 62 112 4.8E-12 T 14-10-2018 AMIS_10620 81be3db84e4dd520531e061062c5f500 195 SUPERFAMILY SSF53335 35 175 1.38E-19 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_47580 3c432627b25e4671f7f044e5aa07d39c 121 SUPERFAMILY SSF54637 4 94 5.18E-15 T 14-10-2018 IPR029069 HotDog domain superfamily AMIS_47580 3c432627b25e4671f7f044e5aa07d39c 121 Gene3D G3DSA:3.10.129.10 2 120 6.3E-30 T 14-10-2018 AMIS_47580 3c432627b25e4671f7f044e5aa07d39c 121 Pfam PF03061 Thioesterase superfamily 25 80 3.7E-6 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AMIS_78100 641f65c785470cbdab07d6e2176699d3 451 Pfam PF08817 WXG100 protein secretion system (Wss), protein YukD 6 81 5.9E-21 T 14-10-2018 IPR024962 YukD-like AMIS_78100 641f65c785470cbdab07d6e2176699d3 451 TIGRFAM TIGR03920 T7SS_EccD: type VII secretion integral membrane protein EccD 8 447 2.6E-59 T 14-10-2018 IPR006707 Type VII secretion system membrane protein EccD AMIS_78100 641f65c785470cbdab07d6e2176699d3 451 Gene3D G3DSA:3.10.20.90 2 83 2.1E-10 T 14-10-2018 AMIS_78100 641f65c785470cbdab07d6e2176699d3 451 PIRSF PIRSF017804 1 451 3.8E-88 T 14-10-2018 IPR006707 Type VII secretion system membrane protein EccD AMIS_47960 2bb52d8e6109155e4652ad618d01dded 334 SUPERFAMILY SSF49785 207 333 1.98E-28 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_47960 2bb52d8e6109155e4652ad618d01dded 334 Gene3D G3DSA:2.60.120.260 207 334 9.7E-35 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_47960 2bb52d8e6109155e4652ad618d01dded 334 Pfam PF00754 F5/8 type C domain 218 329 4.9E-24 T 14-10-2018 IPR000421 Coagulation factor 5/8 C-terminal domain AMIS_73930 325609fcec42b3d95490cb798182e4a3 470 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 274 285 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AMIS_73930 325609fcec42b3d95490cb798182e4a3 470 Gene3D G3DSA:3.40.605.10 11 466 3.1E-163 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AMIS_73930 325609fcec42b3d95490cb798182e4a3 470 Pfam PF00171 Aldehyde dehydrogenase family 15 468 2.6E-158 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AMIS_73930 325609fcec42b3d95490cb798182e4a3 470 SUPERFAMILY SSF53720 4 468 3.27E-151 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMIS_73930 325609fcec42b3d95490cb798182e4a3 470 Gene3D G3DSA:3.40.309.10 251 438 3.1E-163 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AMIS_73930 325609fcec42b3d95490cb798182e4a3 470 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 246 253 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AMIS_65180 b867f179f69ffb6483b5115df240715b 1253 Pfam PF01926 50S ribosome-binding GTPase 82 195 7.2E-11 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 AMIS_65180 b867f179f69ffb6483b5115df240715b 1253 Pfam PF01926 50S ribosome-binding GTPase 738 825 1.9E-7 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 AMIS_65180 b867f179f69ffb6483b5115df240715b 1253 SUPERFAMILY SSF52540 75 245 1.0E-16 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_65180 b867f179f69ffb6483b5115df240715b 1253 Gene3D G3DSA:3.40.50.300 82 247 7.2E-17 T 14-10-2018 AMIS_65180 b867f179f69ffb6483b5115df240715b 1253 Gene3D G3DSA:3.40.50.300 723 917 2.2E-14 T 14-10-2018 AMIS_65180 b867f179f69ffb6483b5115df240715b 1253 SUPERFAMILY SSF52540 730 871 4.56E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_25260 7e06297f8f78bc1eca7bc0cb3f903c41 136 Gene3D G3DSA:1.10.10.10 2 136 2.6E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_25260 7e06297f8f78bc1eca7bc0cb3f903c41 136 SMART SM00347 24 123 5.2E-21 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_25260 7e06297f8f78bc1eca7bc0cb3f903c41 136 SUPERFAMILY SSF46785 4 135 1.14E-28 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_25260 7e06297f8f78bc1eca7bc0cb3f903c41 136 PRINTS PR00598 Bacterial regulatory protein MarR family signature 83 99 5.0E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_25260 7e06297f8f78bc1eca7bc0cb3f903c41 136 PRINTS PR00598 Bacterial regulatory protein MarR family signature 47 63 5.0E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_25260 7e06297f8f78bc1eca7bc0cb3f903c41 136 PRINTS PR00598 Bacterial regulatory protein MarR family signature 64 79 5.0E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_25260 7e06297f8f78bc1eca7bc0cb3f903c41 136 Pfam PF12802 MarR family 30 87 8.2E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_14480 2bc374d889f4b3ad7b790f58188093e8 227 Pfam PF01553 Acyltransferase 21 150 9.6E-28 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AMIS_14480 2bc374d889f4b3ad7b790f58188093e8 227 SMART SM00563 35 154 8.2E-34 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AMIS_14480 2bc374d889f4b3ad7b790f58188093e8 227 SUPERFAMILY SSF69593 3 218 1.7E-54 T 14-10-2018 AMIS_630 43e41523f47b3ebd7bef007d9aefe32c 375 SMART SM00331 143 354 1.8E-25 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_630 43e41523f47b3ebd7bef007d9aefe32c 375 SUPERFAMILY SSF81606 175 314 4.05E-8 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_630 43e41523f47b3ebd7bef007d9aefe32c 375 Gene3D G3DSA:3.60.40.10 147 358 3.8E-44 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_630 43e41523f47b3ebd7bef007d9aefe32c 375 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 174 353 7.3E-35 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_65700 ced3705be7477e82c49ed912f0eec9de 346 SUPERFAMILY SSF46785 10 72 9.25E-8 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_65700 ced3705be7477e82c49ed912f0eec9de 346 Pfam PF13847 Methyltransferase domain 164 283 3.3E-22 T 14-10-2018 IPR025714 Methyltransferase domain AMIS_65700 ced3705be7477e82c49ed912f0eec9de 346 Gene3D G3DSA:3.40.50.150 133 345 3.1E-35 T 14-10-2018 AMIS_65700 ced3705be7477e82c49ed912f0eec9de 346 SUPERFAMILY SSF53335 146 342 7.52E-36 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_65700 ced3705be7477e82c49ed912f0eec9de 346 Gene3D G3DSA:1.10.10.10 5 78 1.2E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_47860 2d29d058f60d9e6796df85c3bc502f9b 537 SUPERFAMILY SSF55073 364 519 7.85E-44 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_47860 2d29d058f60d9e6796df85c3bc502f9b 537 SMART SM00267 348 517 1.8E-62 T 14-10-2018 IPR000160 GGDEF domain AMIS_47860 2d29d058f60d9e6796df85c3bc502f9b 537 Pfam PF00990 Diguanylate cyclase, GGDEF domain 359 511 2.6E-42 T 14-10-2018 IPR000160 GGDEF domain AMIS_47860 2d29d058f60d9e6796df85c3bc502f9b 537 Gene3D G3DSA:3.30.70.270 356 530 1.1E-54 T 14-10-2018 AMIS_47860 2d29d058f60d9e6796df85c3bc502f9b 537 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 355 513 3.8E-40 T 14-10-2018 IPR000160 GGDEF domain AMIS_27080 a2455c3361fcec8cfa270690d1fedf4f 383 Gene3D G3DSA:3.40.47.10 1 379 6.6E-112 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_27080 a2455c3361fcec8cfa270690d1fedf4f 383 SUPERFAMILY SSF53901 2 222 9.74E-23 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_27080 a2455c3361fcec8cfa270690d1fedf4f 383 SUPERFAMILY SSF53901 244 370 7.39E-19 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_27080 a2455c3361fcec8cfa270690d1fedf4f 383 PIRSF PIRSF000429 1 377 9.6E-18 T 14-10-2018 IPR002155 Thiolase GO:0016747 AMIS_12100 984e2c1f090d9c4ce04e9ecca4009e54 459 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 157 332 1.3E-9 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMIS_12100 984e2c1f090d9c4ce04e9ecca4009e54 459 TIGRFAM TIGR00389 glyS_dimeric: glycine--tRNA ligase 7 233 1.4E-82 T 14-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AMIS_12100 984e2c1f090d9c4ce04e9ecca4009e54 459 PRINTS PR01043 Glycyl-tRNA synthetase signature 25 39 2.2E-52 T 14-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AMIS_12100 984e2c1f090d9c4ce04e9ecca4009e54 459 PRINTS PR01043 Glycyl-tRNA synthetase signature 316 328 2.2E-52 T 14-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AMIS_12100 984e2c1f090d9c4ce04e9ecca4009e54 459 PRINTS PR01043 Glycyl-tRNA synthetase signature 157 174 2.2E-52 T 14-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AMIS_12100 984e2c1f090d9c4ce04e9ecca4009e54 459 PRINTS PR01043 Glycyl-tRNA synthetase signature 206 216 2.2E-52 T 14-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AMIS_12100 984e2c1f090d9c4ce04e9ecca4009e54 459 PRINTS PR01043 Glycyl-tRNA synthetase signature 402 421 2.2E-52 T 14-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AMIS_12100 984e2c1f090d9c4ce04e9ecca4009e54 459 PRINTS PR01043 Glycyl-tRNA synthetase signature 136 148 2.2E-52 T 14-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AMIS_12100 984e2c1f090d9c4ce04e9ecca4009e54 459 PRINTS PR01043 Glycyl-tRNA synthetase signature 189 206 2.2E-52 T 14-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AMIS_12100 984e2c1f090d9c4ce04e9ecca4009e54 459 Gene3D G3DSA:3.40.50.800 360 458 1.3E-34 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily AMIS_12100 984e2c1f090d9c4ce04e9ecca4009e54 459 SUPERFAMILY SSF55681 5 368 5.81E-120 T 14-10-2018 AMIS_12100 984e2c1f090d9c4ce04e9ecca4009e54 459 Hamap MF_00253_B Glycine--tRNA ligase [glyQS]. 3 457 49.4 T 14-10-2018 IPR022961 Glycine-tRNA ligase, bacterial GO:0004820 KEGG: 00970+6.1.1.14 AMIS_12100 984e2c1f090d9c4ce04e9ecca4009e54 459 SUPERFAMILY SSF52954 352 457 1.51E-35 T 14-10-2018 AMIS_12100 984e2c1f090d9c4ce04e9ecca4009e54 459 Pfam PF03129 Anticodon binding domain 365 454 1.3E-23 T 14-10-2018 IPR004154 Anticodon-binding AMIS_3160 70b43188700caeff4953cd4864b13a70 359 TIGRFAM TIGR03815 CpaE_hom_Actino: helicase/secretion neighborhood CpaE-like protein 10 350 7.9E-115 T 14-10-2018 IPR022521 Conserved hypothetical protein CHP03815, CpaE-like AMIS_3160 70b43188700caeff4953cd4864b13a70 359 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 124 166 1.7E-6 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AMIS_3160 70b43188700caeff4953cd4864b13a70 359 SUPERFAMILY SSF52540 122 351 1.98E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_3160 70b43188700caeff4953cd4864b13a70 359 Gene3D G3DSA:3.40.50.300 121 355 1.7E-30 T 14-10-2018 AMIS_10960 2af3dfc6b5822d06c5d155c1bd034a41 133 Gene3D G3DSA:1.10.490.10 4 129 1.2E-48 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 AMIS_10960 2af3dfc6b5822d06c5d155c1bd034a41 133 SUPERFAMILY SSF46458 6 125 1.09E-37 T 14-10-2018 IPR009050 Globin-like superfamily AMIS_10960 2af3dfc6b5822d06c5d155c1bd034a41 133 Pfam PF01152 Bacterial-like globin 6 120 1.0E-34 T 14-10-2018 IPR001486 Truncated hemoglobin GO:0019825 AMIS_41340 74887fbabc48e5a43d59431ee4f30373 559 SMART SM00382 58 260 2.0E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_41340 74887fbabc48e5a43d59431ee4f30373 559 SMART SM00382 403 555 3.6E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_41340 74887fbabc48e5a43d59431ee4f30373 559 SUPERFAMILY SSF52540 373 558 8.04E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_41340 74887fbabc48e5a43d59431ee4f30373 559 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_41340 74887fbabc48e5a43d59431ee4f30373 559 Gene3D G3DSA:3.40.50.300 437 559 6.7E-21 T 14-10-2018 AMIS_41340 74887fbabc48e5a43d59431ee4f30373 559 Gene3D G3DSA:3.40.50.300 39 311 3.8E-55 T 14-10-2018 AMIS_41340 74887fbabc48e5a43d59431ee4f30373 559 Pfam PF00005 ABC transporter 394 425 3.3E-6 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_41340 74887fbabc48e5a43d59431ee4f30373 559 SUPERFAMILY SSF52540 31 258 2.85E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_41340 74887fbabc48e5a43d59431ee4f30373 559 Pfam PF00005 ABC transporter 51 215 7.7E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_41340 74887fbabc48e5a43d59431ee4f30373 559 ProSitePatterns PS00211 ABC transporters family signature. 187 201 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_41340 74887fbabc48e5a43d59431ee4f30373 559 Pfam PF00005 ABC transporter 457 509 2.6E-5 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_41340 74887fbabc48e5a43d59431ee4f30373 559 Gene3D G3DSA:3.40.50.300 364 436 2.9E-12 T 14-10-2018 AMIS_41460 7abcfc15734c5bfaf4cb67cd56ee2258 118 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 76 1.4E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_41460 7abcfc15734c5bfaf4cb67cd56ee2258 118 SMART SM00345 17 76 2.8E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_41460 7abcfc15734c5bfaf4cb67cd56ee2258 118 Gene3D G3DSA:1.10.10.10 10 118 2.2E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_41460 7abcfc15734c5bfaf4cb67cd56ee2258 118 SUPERFAMILY SSF46785 5 88 3.2E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_3330 16432d13ae08a39d521ac050f61aec75 665 Gene3D G3DSA:1.20.1250.20 3 419 1.1E-19 T 14-10-2018 AMIS_3330 16432d13ae08a39d521ac050f61aec75 665 SUPERFAMILY SSF103473 5 416 1.05E-21 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_3330 16432d13ae08a39d521ac050f61aec75 665 Pfam PF02223 Thymidylate kinase 461 647 4.2E-48 T 14-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 AMIS_3330 16432d13ae08a39d521ac050f61aec75 665 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 455 648 1.7E-53 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 AMIS_3330 16432d13ae08a39d521ac050f61aec75 665 Gene3D G3DSA:3.40.50.300 453 661 2.1E-67 T 14-10-2018 AMIS_3330 16432d13ae08a39d521ac050f61aec75 665 SUPERFAMILY SSF52540 456 648 1.89E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_3330 16432d13ae08a39d521ac050f61aec75 665 Hamap MF_00165 Thymidylate kinase [tmk]. 457 659 30.805 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 AMIS_3330 16432d13ae08a39d521ac050f61aec75 665 ProSitePatterns PS01331 Thymidylate kinase signature. 546 558 - T 14-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 AMIS_5880 d489bab2997444ae39ad31641e0ac21b 249 PRINTS PR00338 Transcription termination factor NUSG signature 123 135 8.3E-18 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AMIS_5880 d489bab2997444ae39ad31641e0ac21b 249 PRINTS PR00338 Transcription termination factor NUSG signature 225 241 8.3E-18 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AMIS_5880 d489bab2997444ae39ad31641e0ac21b 249 PRINTS PR00338 Transcription termination factor NUSG signature 207 222 8.3E-18 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AMIS_5880 d489bab2997444ae39ad31641e0ac21b 249 Pfam PF02357 Transcription termination factor nusG 70 173 4.5E-22 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AMIS_5880 d489bab2997444ae39ad31641e0ac21b 249 Gene3D G3DSA:3.30.70.940 66 188 1.1E-37 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AMIS_5880 d489bab2997444ae39ad31641e0ac21b 249 Gene3D G3DSA:2.30.30.30 189 249 3.6E-24 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 AMIS_5880 d489bab2997444ae39ad31641e0ac21b 249 SUPERFAMILY SSF50104 194 249 2.31E-16 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily AMIS_5880 d489bab2997444ae39ad31641e0ac21b 249 SMART SM00738 68 179 2.0E-44 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AMIS_5880 d489bab2997444ae39ad31641e0ac21b 249 ProSitePatterns PS01014 Transcription termination factor nusG signature. 232 241 - T 14-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site AMIS_5880 d489bab2997444ae39ad31641e0ac21b 249 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 68 249 22.682 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AMIS_5880 d489bab2997444ae39ad31641e0ac21b 249 SUPERFAMILY SSF82679 70 172 1.83E-33 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AMIS_5880 d489bab2997444ae39ad31641e0ac21b 249 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 71 249 2.2E-59 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AMIS_56020 3b92335d5583dfb7033c787cbfd093b2 111 SUPERFAMILY SSF52309 2 104 1.46E-5 T 14-10-2018 AMIS_12300 d747da5f3133f7ae88039c5e34cc3e58 396 SUPERFAMILY SSF46785 9 71 4.84E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_12300 d747da5f3133f7ae88039c5e34cc3e58 396 Pfam PF00480 ROK family 78 389 1.6E-54 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AMIS_12300 d747da5f3133f7ae88039c5e34cc3e58 396 Gene3D G3DSA:3.30.420.40 199 374 1.4E-86 T 14-10-2018 AMIS_12300 d747da5f3133f7ae88039c5e34cc3e58 396 Gene3D G3DSA:3.30.420.40 82 384 1.4E-86 T 14-10-2018 AMIS_12300 d747da5f3133f7ae88039c5e34cc3e58 396 Gene3D G3DSA:1.10.10.10 10 71 7.6E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_12300 d747da5f3133f7ae88039c5e34cc3e58 396 SUPERFAMILY SSF53067 77 391 1.1E-55 T 14-10-2018 AMIS_12300 d747da5f3133f7ae88039c5e34cc3e58 396 ProSitePatterns PS01125 ROK family signature. 209 236 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AMIS_53960 cc44357014c2c7adc498f408c11ddfe9 309 SUPERFAMILY SSF51430 1 291 4.71E-82 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMIS_53960 cc44357014c2c7adc498f408c11ddfe9 309 Pfam PF00248 Aldo/keto reductase family 2 289 9.0E-63 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain AMIS_53960 cc44357014c2c7adc498f408c11ddfe9 309 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 115 132 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AMIS_53960 cc44357014c2c7adc498f408c11ddfe9 309 Gene3D G3DSA:3.20.20.100 1 305 8.2E-92 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMIS_53960 cc44357014c2c7adc498f408c11ddfe9 309 PRINTS PR00069 Aldo-keto reductase signature 19 43 6.7E-7 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMIS_53960 cc44357014c2c7adc498f408c11ddfe9 309 PRINTS PR00069 Aldo-keto reductase signature 115 132 6.7E-7 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMIS_53960 cc44357014c2c7adc498f408c11ddfe9 309 PRINTS PR00069 Aldo-keto reductase signature 84 102 6.7E-7 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMIS_1930 e6b4d2b35ea9621bbc91d889ce2f1261 486 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 15 428 1.1E-157 T 14-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 AMIS_1930 e6b4d2b35ea9621bbc91d889ce2f1261 486 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 12 453 7.8E-142 T 14-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 AMIS_1930 e6b4d2b35ea9621bbc91d889ce2f1261 486 Gene3D G3DSA:3.40.1670.10 337 452 8.2E-33 T 14-10-2018 AMIS_1930 e6b4d2b35ea9621bbc91d889ce2f1261 486 SUPERFAMILY SSF50475 8 322 5.89E-114 T 14-10-2018 AMIS_1930 e6b4d2b35ea9621bbc91d889ce2f1261 486 SUPERFAMILY SSF143968 323 486 1.44E-55 T 14-10-2018 AMIS_1930 e6b4d2b35ea9621bbc91d889ce2f1261 486 TIGRFAM TIGR03701 mena_SCO4490: menaquinone biosynthesis decarboxylase, SCO4490 family 13 445 3.9E-193 T 14-10-2018 IPR022390 4-hydroxybenzoate decarboxylase subunit C GO:0016831 AMIS_49170 3888fef60bd9b15220e6e3eaae59e7be 272 SUPERFAMILY SSF161098 2 272 1.12E-65 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_49170 3888fef60bd9b15220e6e3eaae59e7be 272 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 262 4.6E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_49170 3888fef60bd9b15220e6e3eaae59e7be 272 Gene3D G3DSA:1.10.3720.10 7 259 9.5E-58 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_57050 05f0115c8e47ed3882e7bda1913228d9 101 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 33 88 1.2E-16 T 14-10-2018 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal AMIS_57050 05f0115c8e47ed3882e7bda1913228d9 101 SUPERFAMILY SSF50249 3 89 2.57E-23 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMIS_57050 05f0115c8e47ed3882e7bda1913228d9 101 Pfam PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) 3 30 7.2E-8 T 14-10-2018 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal AMIS_59610 fff6669e071038b211ad63ac102bdd83 219 TIGRFAM TIGR03351 PhnX-like: phosphonatase-like hydrolase 3 214 3.9E-72 T 14-10-2018 IPR022468 Phosphonatase-like hydrolase AMIS_59610 fff6669e071038b211ad63ac102bdd83 219 SUPERFAMILY SSF56784 3 215 5.51E-39 T 14-10-2018 IPR036412 HAD-like superfamily AMIS_59610 fff6669e071038b211ad63ac102bdd83 219 Gene3D G3DSA:3.40.50.1000 63 218 1.3E-33 T 14-10-2018 IPR023214 HAD superfamily AMIS_59610 fff6669e071038b211ad63ac102bdd83 219 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 185 5.6E-16 T 14-10-2018 AMIS_37940 dc845f6567948c2cf0177ff41dc0fa1d 125 Pfam PF01638 HxlR-like helix-turn-helix 26 109 4.5E-24 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type AMIS_37940 dc845f6567948c2cf0177ff41dc0fa1d 125 SUPERFAMILY SSF46785 12 111 8.93E-26 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_37940 dc845f6567948c2cf0177ff41dc0fa1d 125 Gene3D G3DSA:1.10.10.10 9 124 7.6E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_50800 551feb22766d711a4e59f0edeb846847 619 Gene3D G3DSA:3.30.565.10 1 226 4.4E-73 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_50800 551feb22766d711a4e59f0edeb846847 619 Gene3D G3DSA:3.40.50.11260 395 483 3.0E-31 T 14-10-2018 AMIS_50800 551feb22766d711a4e59f0edeb846847 619 SUPERFAMILY SSF55874 3 211 4.45E-61 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_50800 551feb22766d711a4e59f0edeb846847 619 Hamap MF_00505 Chaperone protein HtpG [htpG]. 1 616 29.942 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 AMIS_50800 551feb22766d711a4e59f0edeb846847 619 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 27 178 1.0E-11 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_50800 551feb22766d711a4e59f0edeb846847 619 Gene3D G3DSA:1.20.120.790 484 616 6.0E-39 T 14-10-2018 IPR037196 HSP90, C-terminal domain AMIS_50800 551feb22766d711a4e59f0edeb846847 619 SMART SM00387 26 180 5.1E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_50800 551feb22766d711a4e59f0edeb846847 619 SUPERFAMILY SSF54211 225 477 6.3E-92 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMIS_50800 551feb22766d711a4e59f0edeb846847 619 SUPERFAMILY SSF110942 499 615 3.53E-33 T 14-10-2018 IPR037196 HSP90, C-terminal domain AMIS_50800 551feb22766d711a4e59f0edeb846847 619 PIRSF PIRSF002583 1 618 2.0E-209 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 AMIS_50800 551feb22766d711a4e59f0edeb846847 619 Gene3D G3DSA:3.30.230.80 227 394 3.5E-63 T 14-10-2018 AMIS_50800 551feb22766d711a4e59f0edeb846847 619 PRINTS PR00775 90kDa heat shock protein signature 91 108 2.4E-59 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AMIS_50800 551feb22766d711a4e59f0edeb846847 619 PRINTS PR00775 90kDa heat shock protein signature 117 139 2.4E-59 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AMIS_50800 551feb22766d711a4e59f0edeb846847 619 PRINTS PR00775 90kDa heat shock protein signature 73 90 2.4E-59 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AMIS_50800 551feb22766d711a4e59f0edeb846847 619 PRINTS PR00775 90kDa heat shock protein signature 191 209 2.4E-59 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AMIS_50800 551feb22766d711a4e59f0edeb846847 619 PRINTS PR00775 90kDa heat shock protein signature 25 47 2.4E-59 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AMIS_50800 551feb22766d711a4e59f0edeb846847 619 PRINTS PR00775 90kDa heat shock protein signature 168 185 2.4E-59 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AMIS_50800 551feb22766d711a4e59f0edeb846847 619 PRINTS PR00775 90kDa heat shock protein signature 4 24 2.4E-59 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AMIS_50800 551feb22766d711a4e59f0edeb846847 619 Pfam PF00183 Hsp90 protein 217 616 1.0E-126 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 AMIS_50800 551feb22766d711a4e59f0edeb846847 619 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 24 33 - T 14-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 AMIS_55830 6a75f612fe34240b428f652cb2c1fddc 110 SMART SM00418 13 91 7.6E-13 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_55830 6a75f612fe34240b428f652cb2c1fddc 110 Gene3D G3DSA:1.10.10.10 5 110 3.3E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_55830 6a75f612fe34240b428f652cb2c1fddc 110 SUPERFAMILY SSF46785 10 103 3.27E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_55830 6a75f612fe34240b428f652cb2c1fddc 110 Pfam PF12840 Helix-turn-helix domain 12 71 1.6E-10 T 14-10-2018 AMIS_38200 79ad7a8594930aa56408765b88de3c52 343 Gene3D G3DSA:1.10.260.40 1 58 1.8E-19 T 14-10-2018 AMIS_38200 79ad7a8594930aa56408765b88de3c52 343 SMART SM00354 5 75 8.4E-19 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_38200 79ad7a8594930aa56408765b88de3c52 343 SUPERFAMILY SSF47413 5 63 2.17E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_38200 79ad7a8594930aa56408765b88de3c52 343 Pfam PF13377 Periplasmic binding protein-like domain 171 339 1.8E-30 T 14-10-2018 AMIS_38200 79ad7a8594930aa56408765b88de3c52 343 Gene3D G3DSA:3.40.50.2300 163 300 1.9E-66 T 14-10-2018 AMIS_38200 79ad7a8594930aa56408765b88de3c52 343 Pfam PF00356 Bacterial regulatory proteins, lacI family 10 52 9.2E-14 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_38200 79ad7a8594930aa56408765b88de3c52 343 SUPERFAMILY SSF53822 65 342 4.93E-56 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_38200 79ad7a8594930aa56408765b88de3c52 343 Gene3D G3DSA:3.40.50.2300 59 317 1.9E-66 T 14-10-2018 AMIS_4210 a879cdc54d832e343f8464429ba8c797 326 SUPERFAMILY SSF51735 8 258 3.86E-54 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_4210 a879cdc54d832e343f8464429ba8c797 326 TIGRFAM TIGR03589 PseB: UDP-N-acetylglucosamine 4,6-dehydratase (inverting) 6 322 5.7E-147 T 14-10-2018 IPR020025 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) KEGG: 00520+4.2.1.115|MetaCyc: PWY-6143|MetaCyc: PWY-7330|MetaCyc: PWY-7331|MetaCyc: PWY-7332|MetaCyc: PWY-7719 AMIS_4210 a879cdc54d832e343f8464429ba8c797 326 Gene3D G3DSA:3.40.50.720 8 306 1.3E-121 T 14-10-2018 AMIS_4210 a879cdc54d832e343f8464429ba8c797 326 Gene3D G3DSA:3.90.25.30 170 310 1.3E-121 T 14-10-2018 AMIS_4210 a879cdc54d832e343f8464429ba8c797 326 Pfam PF02719 Polysaccharide biosynthesis protein 9 282 4.6E-96 T 14-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain AMIS_43010 d50f16a5c6d194384e40722722b8c021 209 Gene3D G3DSA:1.10.357.10 72 208 3.9E-38 T 14-10-2018 AMIS_43010 d50f16a5c6d194384e40722722b8c021 209 SUPERFAMILY SSF46689 22 87 9.98E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_43010 d50f16a5c6d194384e40722722b8c021 209 Pfam PF00440 Bacterial regulatory proteins, tetR family 33 76 1.1E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_43010 d50f16a5c6d194384e40722722b8c021 209 Pfam PF16859 Bacterial transcriptional repressor C-terminal 91 198 1.3E-27 T 14-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AMIS_43010 d50f16a5c6d194384e40722722b8c021 209 SUPERFAMILY SSF48498 94 205 2.63E-24 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_43010 d50f16a5c6d194384e40722722b8c021 209 Gene3D G3DSA:1.10.10.60 21 70 4.6E-18 T 14-10-2018 AMIS_16520 6851c9c97e128eea8261af6fbfc80ec0 925 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 29 923 0.0 T 14-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 AMIS_16520 6851c9c97e128eea8261af6fbfc80ec0 925 Gene3D G3DSA:1.10.1440.20 624 685 4.0E-18 T 14-10-2018 AMIS_16520 6851c9c97e128eea8261af6fbfc80ec0 925 ProSitePatterns PS00450 Aconitase family signature 1. 460 476 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AMIS_16520 6851c9c97e128eea8261af6fbfc80ec0 925 SUPERFAMILY SSF53732 6 660 1.57E-221 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 AMIS_16520 6851c9c97e128eea8261af6fbfc80ec0 925 Gene3D G3DSA:3.30.499.20 10 366 2.5E-157 T 14-10-2018 AMIS_16520 6851c9c97e128eea8261af6fbfc80ec0 925 PRINTS PR00415 Aconitase family signature 144 157 3.3E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMIS_16520 6851c9c97e128eea8261af6fbfc80ec0 925 PRINTS PR00415 Aconitase family signature 273 286 3.3E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMIS_16520 6851c9c97e128eea8261af6fbfc80ec0 925 PRINTS PR00415 Aconitase family signature 526 539 3.3E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMIS_16520 6851c9c97e128eea8261af6fbfc80ec0 925 PRINTS PR00415 Aconitase family signature 197 210 3.3E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMIS_16520 6851c9c97e128eea8261af6fbfc80ec0 925 PRINTS PR00415 Aconitase family signature 211 226 3.3E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMIS_16520 6851c9c97e128eea8261af6fbfc80ec0 925 PRINTS PR00415 Aconitase family signature 168 176 3.3E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMIS_16520 6851c9c97e128eea8261af6fbfc80ec0 925 PRINTS PR00415 Aconitase family signature 366 380 3.3E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMIS_16520 6851c9c97e128eea8261af6fbfc80ec0 925 PRINTS PR00415 Aconitase family signature 287 300 3.3E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMIS_16520 6851c9c97e128eea8261af6fbfc80ec0 925 PRINTS PR00415 Aconitase family signature 464 475 3.3E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMIS_16520 6851c9c97e128eea8261af6fbfc80ec0 925 Gene3D G3DSA:3.20.19.10 687 924 2.7E-105 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 AMIS_16520 6851c9c97e128eea8261af6fbfc80ec0 925 ProSitePatterns PS01244 Aconitase family signature 2. 526 539 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AMIS_16520 6851c9c97e128eea8261af6fbfc80ec0 925 Pfam PF00330 Aconitase family (aconitate hydratase) 67 595 6.6E-179 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMIS_16520 6851c9c97e128eea8261af6fbfc80ec0 925 Pfam PF00694 Aconitase C-terminal domain 725 852 6.0E-45 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 AMIS_16520 6851c9c97e128eea8261af6fbfc80ec0 925 SUPERFAMILY SSF52016 664 923 2.55E-87 T 14-10-2018 AMIS_17940 669cdbf822368f178024d2aa026d3ee0 406 PIRSF PIRSF006356 1 405 4.8E-131 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AMIS_17940 669cdbf822368f178024d2aa026d3ee0 406 Gene3D G3DSA:1.10.3930.10 67 148 1.1E-143 T 14-10-2018 AMIS_17940 669cdbf822368f178024d2aa026d3ee0 406 SUPERFAMILY SSF55909 2 404 9.99E-120 T 14-10-2018 AMIS_17940 669cdbf822368f178024d2aa026d3ee0 406 Pfam PF02274 Amidinotransferase 17 403 1.7E-92 T 14-10-2018 AMIS_17940 669cdbf822368f178024d2aa026d3ee0 406 Hamap MF_00242 Arginine deiminase [arcA]. 1 406 41.58 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AMIS_17940 669cdbf822368f178024d2aa026d3ee0 406 PRINTS PR01466 Bacterial arginine deiminase signature 177 192 3.2E-47 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AMIS_17940 669cdbf822368f178024d2aa026d3ee0 406 PRINTS PR01466 Bacterial arginine deiminase signature 342 359 3.2E-47 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AMIS_17940 669cdbf822368f178024d2aa026d3ee0 406 PRINTS PR01466 Bacterial arginine deiminase signature 362 376 3.2E-47 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AMIS_17940 669cdbf822368f178024d2aa026d3ee0 406 PRINTS PR01466 Bacterial arginine deiminase signature 385 403 3.2E-47 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AMIS_17940 669cdbf822368f178024d2aa026d3ee0 406 PRINTS PR01466 Bacterial arginine deiminase signature 149 167 3.2E-47 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AMIS_17940 669cdbf822368f178024d2aa026d3ee0 406 PRINTS PR01466 Bacterial arginine deiminase signature 1 21 3.2E-47 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AMIS_17940 669cdbf822368f178024d2aa026d3ee0 406 Gene3D G3DSA:3.75.10.10 5 403 1.1E-143 T 14-10-2018 AMIS_590 79b21de203fc9b34b55fe4d893612c1c 193 Hamap MF_00146 dCTP deaminase [dcd]. 1 182 32.97 T 14-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 AMIS_590 79b21de203fc9b34b55fe4d893612c1c 193 SUPERFAMILY SSF51283 1 182 2.75E-52 T 14-10-2018 IPR036157 dUTPase-like superfamily AMIS_590 79b21de203fc9b34b55fe4d893612c1c 193 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 3 181 1.1E-62 T 14-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 AMIS_590 79b21de203fc9b34b55fe4d893612c1c 193 Gene3D G3DSA:2.70.40.10 1 185 1.3E-56 T 14-10-2018 IPR036157 dUTPase-like superfamily AMIS_590 79b21de203fc9b34b55fe4d893612c1c 193 Pfam PF00692 dUTPase 62 179 2.4E-10 T 14-10-2018 IPR029054 dUTPase-like AMIS_75250 7d668ef95b0b606c785d764f19baa9ad 169 Pfam PF09965 Uncharacterized protein conserved in bacteria (DUF2199) 8 152 3.5E-50 T 14-10-2018 IPR018697 Protein of unknown function DUF2199 AMIS_71400 466765c2532a1ce0888b9905fabab598 329 Gene3D G3DSA:3.20.20.210 71 329 5.8E-28 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 AMIS_71400 466765c2532a1ce0888b9905fabab598 329 SUPERFAMILY SSF51726 100 327 2.75E-27 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 AMIS_71400 466765c2532a1ce0888b9905fabab598 329 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 12 322 3.1E-11 T 14-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AMIS_69360 f87d8d3a41ad44d98bc291339b331673 297 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 7 292 53.874 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMIS_69360 f87d8d3a41ad44d98bc291339b331673 297 SMART SM01130 7 294 3.8E-108 T 14-10-2018 IPR002220 DapA-like GO:0016829 AMIS_69360 f87d8d3a41ad44d98bc291339b331673 297 PIRSF PIRSF001365 4 296 9.3E-71 T 14-10-2018 IPR002220 DapA-like GO:0016829 AMIS_69360 f87d8d3a41ad44d98bc291339b331673 297 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 45 62 - T 14-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMIS_69360 f87d8d3a41ad44d98bc291339b331673 297 SUPERFAMILY SSF51569 5 294 4.4E-85 T 14-10-2018 AMIS_69360 f87d8d3a41ad44d98bc291339b331673 297 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 11 287 7.7E-75 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMIS_69360 f87d8d3a41ad44d98bc291339b331673 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 42 63 1.6E-26 T 14-10-2018 IPR002220 DapA-like GO:0016829 AMIS_69360 f87d8d3a41ad44d98bc291339b331673 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 135 152 1.6E-26 T 14-10-2018 IPR002220 DapA-like GO:0016829 AMIS_69360 f87d8d3a41ad44d98bc291339b331673 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 78 96 1.6E-26 T 14-10-2018 IPR002220 DapA-like GO:0016829 AMIS_69360 f87d8d3a41ad44d98bc291339b331673 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 110 126 1.6E-26 T 14-10-2018 IPR002220 DapA-like GO:0016829 AMIS_69360 f87d8d3a41ad44d98bc291339b331673 297 Gene3D G3DSA:3.20.20.70 2 296 6.5E-96 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_69360 f87d8d3a41ad44d98bc291339b331673 297 Pfam PF00701 Dihydrodipicolinate synthetase family 8 291 1.2E-79 T 14-10-2018 IPR002220 DapA-like GO:0016829 AMIS_69360 f87d8d3a41ad44d98bc291339b331673 297 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 140 170 - T 14-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 AMIS_63570 e30c6c9fe69900e95946e8bc3300d7ea 720 SUPERFAMILY SSF55781 198 346 7.85E-9 T 14-10-2018 AMIS_63570 e30c6c9fe69900e95946e8bc3300d7ea 720 SMART SM00065 196 346 0.0064 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_63570 e30c6c9fe69900e95946e8bc3300d7ea 720 SUPERFAMILY SSF81606 380 583 2.22E-6 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_63570 e30c6c9fe69900e95946e8bc3300d7ea 720 Pfam PF13581 Histidine kinase-like ATPase domain 599 708 3.0E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_63570 e30c6c9fe69900e95946e8bc3300d7ea 720 SMART SM00331 372 585 3.1E-41 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_63570 e30c6c9fe69900e95946e8bc3300d7ea 720 Gene3D G3DSA:3.60.40.10 360 585 4.7E-56 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_63570 e30c6c9fe69900e95946e8bc3300d7ea 720 Gene3D G3DSA:3.30.450.20 59 183 1.8E-12 T 14-10-2018 AMIS_63570 e30c6c9fe69900e95946e8bc3300d7ea 720 SUPERFAMILY SSF55874 621 710 2.53E-5 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_63570 e30c6c9fe69900e95946e8bc3300d7ea 720 Pfam PF13185 GAF domain 195 335 1.9E-8 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_63570 e30c6c9fe69900e95946e8bc3300d7ea 720 Gene3D G3DSA:3.30.565.10 590 716 1.3E-24 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_63570 e30c6c9fe69900e95946e8bc3300d7ea 720 Gene3D G3DSA:3.30.450.40 184 346 2.7E-10 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_63570 e30c6c9fe69900e95946e8bc3300d7ea 720 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 394 584 8.0E-44 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_68880 de9477067087bbf6e33418b0f6c6f7f9 300 Gene3D G3DSA:3.40.50.1820 1 300 4.8E-44 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_68880 de9477067087bbf6e33418b0f6c6f7f9 300 SUPERFAMILY SSF53474 5 298 2.72E-39 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_68880 de9477067087bbf6e33418b0f6c6f7f9 300 Pfam PF12697 Alpha/beta hydrolase family 26 290 1.7E-20 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_62680 a13b4a0b3f5ee6506eff79b2060fcc38 172 SUPERFAMILY SSF54637 15 164 7.79E-35 T 14-10-2018 IPR029069 HotDog domain superfamily AMIS_62680 a13b4a0b3f5ee6506eff79b2060fcc38 172 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 52 164 1.4E-22 T 14-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 AMIS_62680 a13b4a0b3f5ee6506eff79b2060fcc38 172 Pfam PF03061 Thioesterase superfamily 80 158 5.8E-15 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AMIS_62680 a13b4a0b3f5ee6506eff79b2060fcc38 172 Gene3D G3DSA:3.10.129.10 21 170 3.0E-40 T 14-10-2018 AMIS_76010 1f4e50e69883cb9b53c6411347d15349 249 Gene3D G3DSA:3.40.50.1240 3 249 9.0E-79 T 14-10-2018 IPR029033 Histidine phosphatase superfamily AMIS_76010 1f4e50e69883cb9b53c6411347d15349 249 SMART SM00855 4 190 1.8E-22 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AMIS_76010 1f4e50e69883cb9b53c6411347d15349 249 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 2 231 41.735 T 14-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 AMIS_76010 1f4e50e69883cb9b53c6411347d15349 249 SUPERFAMILY SSF53254 1 221 5.57E-69 T 14-10-2018 IPR029033 Histidine phosphatase superfamily AMIS_76010 1f4e50e69883cb9b53c6411347d15349 249 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 131 4.1E-25 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AMIS_76010 1f4e50e69883cb9b53c6411347d15349 249 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 4 248 4.3E-113 T 14-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 AMIS_76010 1f4e50e69883cb9b53c6411347d15349 249 PIRSF PIRSF000709 2 112 1.8E-4 T 14-10-2018 AMIS_76010 1f4e50e69883cb9b53c6411347d15349 249 PIRSF PIRSF000709 147 213 1.6 T 14-10-2018 AMIS_51000 6c6e5402289565647c2c414eb144f8e0 904 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 446 457 - T 14-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 AMIS_51000 6c6e5402289565647c2c414eb144f8e0 904 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 535 893 8.4E-79 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AMIS_51000 6c6e5402289565647c2c414eb144f8e0 904 PIRSF PIRSF000853 1 904 0.0 T 14-10-2018 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMIS_51000 6c6e5402289565647c2c414eb144f8e0 904 Pfam PF00391 PEP-utilising enzyme, mobile domain 418 497 3.2E-26 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AMIS_51000 6c6e5402289565647c2c414eb144f8e0 904 Gene3D G3DSA:3.50.30.10 381 499 1.7E-60 T 14-10-2018 AMIS_51000 6c6e5402289565647c2c414eb144f8e0 904 Gene3D G3DSA:3.30.1490.20 10 241 8.8E-98 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AMIS_51000 6c6e5402289565647c2c414eb144f8e0 904 Gene3D G3DSA:1.20.80.30 108 194 8.8E-98 T 14-10-2018 AMIS_51000 6c6e5402289565647c2c414eb144f8e0 904 Gene3D G3DSA:3.20.20.60 543 896 1.2E-134 T 14-10-2018 AMIS_51000 6c6e5402289565647c2c414eb144f8e0 904 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 294 350 2.6E-9 T 14-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 AMIS_51000 6c6e5402289565647c2c414eb144f8e0 904 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 16 285 6.6E-44 T 14-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 AMIS_51000 6c6e5402289565647c2c414eb144f8e0 904 SUPERFAMILY SSF52009 378 505 7.72E-35 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 AMIS_51000 6c6e5402289565647c2c414eb144f8e0 904 Gene3D G3DSA:3.30.470.20 242 339 1.2E-37 T 14-10-2018 AMIS_51000 6c6e5402289565647c2c414eb144f8e0 904 SUPERFAMILY SSF51621 534 895 7.85E-109 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AMIS_51000 6c6e5402289565647c2c414eb144f8e0 904 SUPERFAMILY SSF56059 1 377 6.47E-133 T 14-10-2018 AMIS_51000 6c6e5402289565647c2c414eb144f8e0 904 TIGRFAM TIGR01828 pyru_phos_dikin: pyruvate, phosphate dikinase 1 896 0.0 T 14-10-2018 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMIS_51000 6c6e5402289565647c2c414eb144f8e0 904 Gene3D G3DSA:1.10.189.10 343 515 1.7E-60 T 14-10-2018 AMIS_77490 9f5f9b1acc1a38ae7340627cc325bfc5 365 SMART SM00028 11 44 34.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_77490 9f5f9b1acc1a38ae7340627cc325bfc5 365 SMART SM00028 45 78 170.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_77490 9f5f9b1acc1a38ae7340627cc325bfc5 365 SMART SM00028 147 180 1.7 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_77490 9f5f9b1acc1a38ae7340627cc325bfc5 365 Gene3D G3DSA:1.25.40.10 4 228 6.6E-24 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_77490 9f5f9b1acc1a38ae7340627cc325bfc5 365 SUPERFAMILY SSF48452 10 205 1.73E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_67500 9b9454a3288d8586b1152c2adef7479b 733 SMART SM01006 4 51 2.8E-17 T 14-10-2018 IPR019432 Siderophore biosynthesis protein, conserved domain AMIS_67500 9b9454a3288d8586b1152c2adef7479b 733 Pfam PF13523 Acetyltransferase (GNAT) domain 7 152 1.0E-49 T 14-10-2018 AMIS_67500 9b9454a3288d8586b1152c2adef7479b 733 Pfam PF06276 Ferric iron reductase FhuF-like transporter 558 707 8.0E-32 T 14-10-2018 IPR022770 Ferric iron reductase FhuF domain AMIS_67500 9b9454a3288d8586b1152c2adef7479b 733 Pfam PF04183 IucA / IucC family 291 537 5.3E-74 T 14-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 AMIS_67500 9b9454a3288d8586b1152c2adef7479b 733 Gene3D G3DSA:1.10.510.40 526 729 4.5E-61 T 14-10-2018 AMIS_67500 9b9454a3288d8586b1152c2adef7479b 733 SUPERFAMILY SSF55729 2 164 8.04E-40 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_67500 9b9454a3288d8586b1152c2adef7479b 733 Gene3D G3DSA:3.40.630.30 1 163 7.2E-53 T 14-10-2018 AMIS_67500 9b9454a3288d8586b1152c2adef7479b 733 Gene3D G3DSA:1.10.274.90 164 279 1.4E-32 T 14-10-2018 AMIS_32850 ce25774eae8384b600360fed722517c0 390 Gene3D G3DSA:1.10.540.10 2 106 2.8E-27 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMIS_32850 ce25774eae8384b600360fed722517c0 390 SUPERFAMILY SSF47203 219 373 3.22E-17 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMIS_32850 ce25774eae8384b600360fed722517c0 390 Gene3D G3DSA:2.40.110.10 112 223 1.2E-34 T 14-10-2018 AMIS_32850 ce25774eae8384b600360fed722517c0 390 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 107 1.4E-20 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMIS_32850 ce25774eae8384b600360fed722517c0 390 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 219 371 9.7E-18 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMIS_32850 ce25774eae8384b600360fed722517c0 390 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 112 207 6.6E-23 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMIS_32850 ce25774eae8384b600360fed722517c0 390 SUPERFAMILY SSF56645 2 232 1.11E-69 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMIS_32850 ce25774eae8384b600360fed722517c0 390 Gene3D G3DSA:1.20.140.10 224 378 1.0E-25 T 14-10-2018 AMIS_52340 549a5b14b9bf203f7c17157793a2d79a 394 Pfam PF12704 MacB-like periplasmic core domain 21 238 5.2E-32 T 14-10-2018 IPR025857 MacB-like periplasmic core domain AMIS_52340 549a5b14b9bf203f7c17157793a2d79a 394 Pfam PF02687 FtsX-like permease family 300 387 1.1E-7 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AMIS_36100 7aeed4df43a0455009d0b59a8eba99bb 254 Gene3D G3DSA:1.10.287.130 42 99 2.8E-10 T 14-10-2018 AMIS_36100 7aeed4df43a0455009d0b59a8eba99bb 254 SUPERFAMILY SSF47384 25 102 2.75E-10 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_36100 7aeed4df43a0455009d0b59a8eba99bb 254 Gene3D G3DSA:3.30.565.10 100 241 2.8E-10 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_36100 7aeed4df43a0455009d0b59a8eba99bb 254 SMART SM00388 37 102 3.4E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_36100 7aeed4df43a0455009d0b59a8eba99bb 254 Pfam PF00512 His Kinase A (phospho-acceptor) domain 37 102 1.4E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_78210 f3fcaeed314fdbcafe1c550f7d716992 328 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 135 147 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 AMIS_78210 f3fcaeed314fdbcafe1c550f7d716992 328 Gene3D G3DSA:1.10.510.10 99 282 3.6E-35 T 14-10-2018 AMIS_78210 f3fcaeed314fdbcafe1c550f7d716992 328 Gene3D G3DSA:3.30.200.20 19 97 9.5E-18 T 14-10-2018 AMIS_78210 f3fcaeed314fdbcafe1c550f7d716992 328 SUPERFAMILY SSF56112 21 304 1.91E-58 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMIS_78210 f3fcaeed314fdbcafe1c550f7d716992 328 SMART SM00220 17 269 1.2E-41 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMIS_78210 f3fcaeed314fdbcafe1c550f7d716992 328 Pfam PF00069 Protein kinase domain 24 265 2.2E-40 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMIS_3990 358b418bf48a9b503bc25b08757e79cf 160 SUPERFAMILY SSF55874 54 141 1.19E-9 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_3990 358b418bf48a9b503bc25b08757e79cf 160 Pfam PF13581 Histidine kinase-like ATPase domain 43 147 1.0E-11 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_3990 358b418bf48a9b503bc25b08757e79cf 160 Gene3D G3DSA:3.30.565.10 29 156 8.0E-23 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_53000 6c17329be56fc79377b91f10e25e09d2 235 Gene3D G3DSA:3.40.50.2300 1 134 3.8E-42 T 14-10-2018 AMIS_53000 6c17329be56fc79377b91f10e25e09d2 235 Pfam PF00072 Response regulator receiver domain 6 116 2.7E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_53000 6c17329be56fc79377b91f10e25e09d2 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 230 2.2E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_53000 6c17329be56fc79377b91f10e25e09d2 235 Gene3D G3DSA:1.10.10.10 135 234 7.4E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_53000 6c17329be56fc79377b91f10e25e09d2 235 SMART SM00862 155 230 5.0E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_53000 6c17329be56fc79377b91f10e25e09d2 235 SMART SM00448 4 115 1.1E-48 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_53000 6c17329be56fc79377b91f10e25e09d2 235 SUPERFAMILY SSF46894 133 231 5.67E-28 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_53000 6c17329be56fc79377b91f10e25e09d2 235 SUPERFAMILY SSF52172 2 128 9.39E-47 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_21680 ac4b1507ccf0edac7f23559ee45b6752 228 SMART SM00882 6 191 0.0022 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 AMIS_21680 ac4b1507ccf0edac7f23559ee45b6752 228 Pfam PF01144 Coenzyme A transferase 81 190 1.1E-6 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 AMIS_21680 ac4b1507ccf0edac7f23559ee45b6752 228 Gene3D G3DSA:3.40.1080.10 2 225 2.2E-43 T 14-10-2018 AMIS_21680 ac4b1507ccf0edac7f23559ee45b6752 228 SUPERFAMILY SSF100950 3 226 1.42E-48 T 14-10-2018 IPR037171 NagB/RpiA transferase-like AMIS_49790 735eac861a7bd869e7a813a4776b4839 323 Gene3D G3DSA:2.40.10.10 105 217 6.8E-31 T 14-10-2018 AMIS_49790 735eac861a7bd869e7a813a4776b4839 323 SUPERFAMILY SSF50494 101 310 8.25E-16 T 14-10-2018 IPR009003 Peptidase S1, PA clan AMIS_49790 735eac861a7bd869e7a813a4776b4839 323 Gene3D G3DSA:2.40.10.10 218 319 3.4E-19 T 14-10-2018 AMIS_22210 5017eb07aa1f739efbf00f6cd5ff242c 261 Gene3D G3DSA:3.20.10.10 112 256 4.1E-22 T 14-10-2018 AMIS_22210 5017eb07aa1f739efbf00f6cd5ff242c 261 Pfam PF01063 Amino-transferase class IV 25 232 1.6E-27 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 AMIS_22210 5017eb07aa1f739efbf00f6cd5ff242c 261 SUPERFAMILY SSF56752 11 238 4.06E-38 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 AMIS_23850 e23821734bd1b1c2778308ccb4d672f3 302 Pfam PF03547 Membrane transport protein 11 142 3.6E-7 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 AMIS_23850 e23821734bd1b1c2778308ccb4d672f3 302 Pfam PF03547 Membrane transport protein 153 292 7.0E-12 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 AMIS_74790 8addda7856e6a7dec61613350d96b01f 269 PIRSF PIRSF018249 2 266 1.3E-81 T 14-10-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 AMIS_74790 8addda7856e6a7dec61613350d96b01f 269 SUPERFAMILY SSF53335 11 247 8.92E-31 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_74790 8addda7856e6a7dec61613350d96b01f 269 Gene3D G3DSA:3.40.50.150 8 266 9.8E-67 T 14-10-2018 AMIS_74790 8addda7856e6a7dec61613350d96b01f 269 Pfam PF13649 Methyltransferase domain 86 170 2.0E-6 T 14-10-2018 AMIS_26340 522bb1f3c5b1142d99c0352a757e2ea8 416 Gene3D G3DSA:3.40.190.10 46 352 8.6E-90 T 14-10-2018 AMIS_26340 522bb1f3c5b1142d99c0352a757e2ea8 416 Gene3D G3DSA:3.40.190.10 138 406 8.6E-90 T 14-10-2018 AMIS_26340 522bb1f3c5b1142d99c0352a757e2ea8 416 SUPERFAMILY SSF53850 15 414 1.43E-69 T 14-10-2018 AMIS_26340 522bb1f3c5b1142d99c0352a757e2ea8 416 Pfam PF13416 Bacterial extracellular solute-binding protein 45 352 7.2E-42 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein AMIS_61560 bf0818a0bd28e87083d6aeb292104252 303 Hamap MF_00082 Acetylglutamate kinase [argB]. 22 280 47.674 T 14-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AMIS_61560 bf0818a0bd28e87083d6aeb292104252 303 Gene3D G3DSA:3.40.1160.10 1 291 2.1E-103 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AMIS_61560 bf0818a0bd28e87083d6aeb292104252 303 TIGRFAM TIGR00761 argB: acetylglutamate kinase 24 262 3.4E-78 T 14-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AMIS_61560 bf0818a0bd28e87083d6aeb292104252 303 SUPERFAMILY SSF53633 3 288 3.93E-87 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AMIS_61560 bf0818a0bd28e87083d6aeb292104252 303 PRINTS PR00474 Glutamate 5-kinase family signature 186 213 5.6E-8 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AMIS_61560 bf0818a0bd28e87083d6aeb292104252 303 PRINTS PR00474 Glutamate 5-kinase family signature 54 68 5.6E-8 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AMIS_61560 bf0818a0bd28e87083d6aeb292104252 303 PRINTS PR00474 Glutamate 5-kinase family signature 237 257 5.6E-8 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AMIS_61560 bf0818a0bd28e87083d6aeb292104252 303 Pfam PF00696 Amino acid kinase family 24 263 1.2E-46 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AMIS_61560 bf0818a0bd28e87083d6aeb292104252 303 PIRSF PIRSF000728 8 287 2.1E-100 T 14-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AMIS_69890 5d6d6cfc967e95b9e0a396e150888c27 249 SUPERFAMILY SSF55781 39 161 6.87E-9 T 14-10-2018 AMIS_69890 5d6d6cfc967e95b9e0a396e150888c27 249 Gene3D G3DSA:3.30.450.40 43 156 7.3E-10 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_69890 5d6d6cfc967e95b9e0a396e150888c27 249 SMART SM01012 166 234 2.1E-5 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 AMIS_22720 f9dd3ed6c8e0bc274a85fdcdfa7cdc5e 332 SMART SM01236 157 262 1.3E-32 T 14-10-2018 AMIS_22720 f9dd3ed6c8e0bc274a85fdcdfa7cdc5e 332 Pfam PF14518 Iron-containing redox enzyme 125 299 1.1E-45 T 14-10-2018 AMIS_22720 f9dd3ed6c8e0bc274a85fdcdfa7cdc5e 332 SUPERFAMILY SSF48613 112 297 5.34E-12 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AMIS_22720 f9dd3ed6c8e0bc274a85fdcdfa7cdc5e 332 Gene3D G3DSA:1.20.910.10 104 310 2.4E-29 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AMIS_52210 fed734c5402af55e7a23b804e3e59f69 511 SUPERFAMILY SSF52540 247 488 1.55E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_52210 fed734c5402af55e7a23b804e3e59f69 511 ProSitePatterns PS00211 ABC transporters family signature. 407 421 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_52210 fed734c5402af55e7a23b804e3e59f69 511 Pfam PF00005 ABC transporter 279 434 6.7E-17 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_52210 fed734c5402af55e7a23b804e3e59f69 511 Gene3D G3DSA:3.40.50.300 257 510 9.0E-39 T 14-10-2018 AMIS_52210 fed734c5402af55e7a23b804e3e59f69 511 Gene3D G3DSA:3.40.50.300 1 248 3.4E-56 T 14-10-2018 AMIS_52210 fed734c5402af55e7a23b804e3e59f69 511 SUPERFAMILY SSF52540 4 233 8.32E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_52210 fed734c5402af55e7a23b804e3e59f69 511 SMART SM00382 287 482 5.4E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_52210 fed734c5402af55e7a23b804e3e59f69 511 SMART SM00382 30 220 6.4E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_52210 fed734c5402af55e7a23b804e3e59f69 511 Pfam PF00005 ABC transporter 21 172 1.6E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_50110 fd5da0be7ec999dea50e50b4074eedb4 226 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 125 153 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMIS_50110 fd5da0be7ec999dea50e50b4074eedb4 226 SUPERFAMILY SSF51735 4 208 6.87E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_50110 fd5da0be7ec999dea50e50b4074eedb4 226 Pfam PF00106 short chain dehydrogenase 3 181 1.3E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_50110 fd5da0be7ec999dea50e50b4074eedb4 226 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 118 126 2.4E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_50110 fd5da0be7ec999dea50e50b4074eedb4 226 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 157 2.4E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_50110 fd5da0be7ec999dea50e50b4074eedb4 226 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 66 77 2.4E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_50110 fd5da0be7ec999dea50e50b4074eedb4 226 Gene3D G3DSA:3.40.50.720 2 225 3.4E-46 T 14-10-2018 AMIS_50110 fd5da0be7ec999dea50e50b4074eedb4 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 175 6.1E-28 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_50110 fd5da0be7ec999dea50e50b4074eedb4 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 157 6.1E-28 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_50110 fd5da0be7ec999dea50e50b4074eedb4 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 6.1E-28 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_50110 fd5da0be7ec999dea50e50b4074eedb4 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 112 128 6.1E-28 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_50110 fd5da0be7ec999dea50e50b4074eedb4 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 206 6.1E-28 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_50110 fd5da0be7ec999dea50e50b4074eedb4 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 66 77 6.1E-28 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_58480 445d2d651e27bff503ab27c343e4538a 446 Gene3D G3DSA:3.40.50.720 6 403 6.5E-113 T 14-10-2018 AMIS_58480 445d2d651e27bff503ab27c343e4538a 446 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 166 441 8.2E-68 T 14-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMIS_58480 445d2d651e27bff503ab27c343e4538a 446 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 118 131 1.5E-38 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMIS_58480 445d2d651e27bff503ab27c343e4538a 446 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 212 228 1.5E-38 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMIS_58480 445d2d651e27bff503ab27c343e4538a 446 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 142 170 1.5E-38 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMIS_58480 445d2d651e27bff503ab27c343e4538a 446 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 194 211 1.5E-38 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMIS_58480 445d2d651e27bff503ab27c343e4538a 446 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 302 328 1.5E-38 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMIS_58480 445d2d651e27bff503ab27c343e4538a 446 SUPERFAMILY SSF55347 152 442 2.88E-77 T 14-10-2018 AMIS_58480 445d2d651e27bff503ab27c343e4538a 446 Gene3D G3DSA:3.30.360.10 152 441 6.5E-113 T 14-10-2018 AMIS_58480 445d2d651e27bff503ab27c343e4538a 446 PIRSF PIRSF000110 1 445 1.7E-104 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMIS_58480 445d2d651e27bff503ab27c343e4538a 446 SUPERFAMILY SSF51735 3 165 3.94E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_58480 445d2d651e27bff503ab27c343e4538a 446 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 7 162 1.7E-25 T 14-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMIS_33450 bac77008b20f8d3d6595b40128557bdb 318 Gene3D G3DSA:3.90.1580.10 56 256 6.3E-5 T 14-10-2018 AMIS_33450 bac77008b20f8d3d6595b40128557bdb 318 SUPERFAMILY SSF56436 56 287 5.18E-7 T 14-10-2018 IPR016187 C-type lectin fold AMIS_22300 3ceb1ce423b2f91cee5d2d257a06159e 279 Pfam PF14016 Protein of unknown function (DUF4232) 142 272 4.5E-23 T 14-10-2018 IPR025326 Protein of unknown function DUF4232 AMIS_50460 0001f9f32d603ff9de3f44f88245007e 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 244 3.5E-59 T 14-10-2018 AMIS_50460 0001f9f32d603ff9de3f44f88245007e 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMIS_50460 0001f9f32d603ff9de3f44f88245007e 246 SUPERFAMILY SSF51735 3 245 2.55E-73 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_50460 0001f9f32d603ff9de3f44f88245007e 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 4.3E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_50460 0001f9f32d603ff9de3f44f88245007e 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 4.3E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_50460 0001f9f32d603ff9de3f44f88245007e 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 4.3E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_50460 0001f9f32d603ff9de3f44f88245007e 246 Gene3D G3DSA:3.40.50.720 3 246 1.3E-73 T 14-10-2018 AMIS_50460 0001f9f32d603ff9de3f44f88245007e 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 7.8E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_50460 0001f9f32d603ff9de3f44f88245007e 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 7.8E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_50460 0001f9f32d603ff9de3f44f88245007e 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 7.8E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_50460 0001f9f32d603ff9de3f44f88245007e 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 7.8E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_50460 0001f9f32d603ff9de3f44f88245007e 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 7.8E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_50460 0001f9f32d603ff9de3f44f88245007e 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 7.8E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_27290 f8446f5a9af8a41c1582251c8e4e62e3 292 Pfam PF12697 Alpha/beta hydrolase family 44 266 2.0E-12 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_27290 f8446f5a9af8a41c1582251c8e4e62e3 292 SUPERFAMILY SSF53474 23 272 7.97E-36 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_27290 f8446f5a9af8a41c1582251c8e4e62e3 292 Gene3D G3DSA:3.40.50.1820 38 277 1.0E-36 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_39830 1477cb57bd06790179efe9b8c9925cd2 337 ProSitePatterns PS00356 LacI-type HTH domain signature. 11 29 - T 14-10-2018 AMIS_39830 1477cb57bd06790179efe9b8c9925cd2 337 Gene3D G3DSA:1.10.260.40 2 57 5.2E-17 T 14-10-2018 AMIS_39830 1477cb57bd06790179efe9b8c9925cd2 337 Gene3D G3DSA:3.40.50.2300 159 324 1.1E-58 T 14-10-2018 AMIS_39830 1477cb57bd06790179efe9b8c9925cd2 337 Pfam PF13377 Periplasmic binding protein-like domain 168 329 6.2E-32 T 14-10-2018 AMIS_39830 1477cb57bd06790179efe9b8c9925cd2 337 SMART SM00354 8 70 5.0E-13 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_39830 1477cb57bd06790179efe9b8c9925cd2 337 SUPERFAMILY SSF47413 8 55 1.13E-11 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_39830 1477cb57bd06790179efe9b8c9925cd2 337 Pfam PF00356 Bacterial regulatory proteins, lacI family 10 54 4.9E-16 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_39830 1477cb57bd06790179efe9b8c9925cd2 337 SUPERFAMILY SSF53822 61 332 1.16E-54 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_39830 1477cb57bd06790179efe9b8c9925cd2 337 Gene3D G3DSA:3.40.50.2300 86 320 1.1E-58 T 14-10-2018 AMIS_56620 8a8619e457a00b599de8c9260c148833 313 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 308 3.4E-34 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_56620 8a8619e457a00b599de8c9260c148833 313 Gene3D G3DSA:1.10.3720.10 84 303 4.9E-22 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_56620 8a8619e457a00b599de8c9260c148833 313 SUPERFAMILY SSF161098 93 293 1.09E-18 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_27010 94df627d193ed46f36b3bcd53287109e 203 SUPERFAMILY SSF46689 17 89 8.51E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_27010 94df627d193ed46f36b3bcd53287109e 203 Gene3D G3DSA:1.10.357.10 66 202 1.1E-32 T 14-10-2018 AMIS_27010 94df627d193ed46f36b3bcd53287109e 203 Pfam PF00440 Bacterial regulatory proteins, tetR family 33 71 8.7E-14 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_27010 94df627d193ed46f36b3bcd53287109e 203 TIGRFAM TIGR03968 mycofact_TetR: mycofactocin system transcriptional regulator 16 203 1.1E-75 T 14-10-2018 IPR023851 Transcriptional regulator, TetR-type AMIS_27010 94df627d193ed46f36b3bcd53287109e 203 Gene3D G3DSA:1.10.10.60 25 64 1.3E-16 T 14-10-2018 AMIS_27010 94df627d193ed46f36b3bcd53287109e 203 ProSitePatterns PS01081 TetR-type HTH domain signature. 40 71 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMIS_80400 8a90b541876187c797129ce9d5c3293a 387 SUPERFAMILY SSF47384 161 228 1.8E-11 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_80400 8a90b541876187c797129ce9d5c3293a 387 SMART SM00388 166 234 1.8E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_80400 8a90b541876187c797129ce9d5c3293a 387 SUPERFAMILY SSF55874 237 386 8.12E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_80400 8a90b541876187c797129ce9d5c3293a 387 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 280 386 3.9E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_80400 8a90b541876187c797129ce9d5c3293a 387 SMART SM00387 278 387 9.1E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_80400 8a90b541876187c797129ce9d5c3293a 387 Pfam PF00512 His Kinase A (phospho-acceptor) domain 170 232 5.7E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_80400 8a90b541876187c797129ce9d5c3293a 387 Gene3D G3DSA:1.10.287.130 160 232 5.2E-12 T 14-10-2018 AMIS_80400 8a90b541876187c797129ce9d5c3293a 387 Gene3D G3DSA:3.30.565.10 240 387 1.9E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_80400 8a90b541876187c797129ce9d5c3293a 387 PRINTS PR00344 Bacterial sensor protein C-terminal signature 333 343 1.0E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_80400 8a90b541876187c797129ce9d5c3293a 387 PRINTS PR00344 Bacterial sensor protein C-terminal signature 348 366 1.0E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_80400 8a90b541876187c797129ce9d5c3293a 387 PRINTS PR00344 Bacterial sensor protein C-terminal signature 315 329 1.0E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_80400 8a90b541876187c797129ce9d5c3293a 387 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 385 1.0E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_78450 24e619c627eacd85b23a671d40a471af 345 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_78450 24e619c627eacd85b23a671d40a471af 345 SMART SM00382 41 233 2.9E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_78450 24e619c627eacd85b23a671d40a471af 345 SUPERFAMILY SSF52540 6 254 3.36E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_78450 24e619c627eacd85b23a671d40a471af 345 Pfam PF00005 ABC transporter 33 183 6.6E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_78450 24e619c627eacd85b23a671d40a471af 345 Gene3D G3DSA:3.40.50.300 3 339 5.1E-98 T 14-10-2018 AMIS_78450 24e619c627eacd85b23a671d40a471af 345 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 304 2.9E-17 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMIS_78450 24e619c627eacd85b23a671d40a471af 345 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 233 327 1.6E-26 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMIS_2110 e50af7fa872de33f4c56e4d937103b9f 89 PIRSF PIRSF004669 1 89 2.6E-31 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AMIS_2110 e50af7fa872de33f4c56e4d937103b9f 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 6.6E-27 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AMIS_2110 e50af7fa872de33f4c56e4d937103b9f 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 5.7E-19 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AMIS_2110 e50af7fa872de33f4c56e4d937103b9f 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 5.7E-19 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AMIS_2110 e50af7fa872de33f4c56e4d937103b9f 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 5.7E-19 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AMIS_2110 e50af7fa872de33f4c56e4d937103b9f 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 2.4E-27 T 14-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 AMIS_56450 3e12db552cc322e5e08d095c10a1018f 475 Gene3D G3DSA:3.50.50.60 307 475 3.8E-42 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_56450 3e12db552cc322e5e08d095c10a1018f 475 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 5 206 5.3E-16 T 14-10-2018 AMIS_56450 3e12db552cc322e5e08d095c10a1018f 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 3.0E-5 T 14-10-2018 AMIS_56450 3e12db552cc322e5e08d095c10a1018f 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 167 185 3.0E-5 T 14-10-2018 AMIS_56450 3e12db552cc322e5e08d095c10a1018f 475 SUPERFAMILY SSF51905 272 468 3.02E-21 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_56450 3e12db552cc322e5e08d095c10a1018f 475 SUPERFAMILY SSF51905 1 239 1.58E-59 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_56450 3e12db552cc322e5e08d095c10a1018f 475 Gene3D G3DSA:3.50.50.60 1 235 5.7E-71 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_56450 3e12db552cc322e5e08d095c10a1018f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 167 192 2.4E-7 T 14-10-2018 AMIS_56450 3e12db552cc322e5e08d095c10a1018f 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 2.4E-7 T 14-10-2018 AMIS_55750 61848809c507f74bbb80fc217a8a2548 398 Pfam PF13449 Esterase-like activity of phytase 76 365 7.2E-63 T 14-10-2018 IPR027372 Phytase-like domain AMIS_55750 61848809c507f74bbb80fc217a8a2548 398 SUPERFAMILY SSF63829 80 294 1.6E-6 T 14-10-2018 AMIS_40020 ce9a1030afb5e28e9ddc2d9c9053cc50 223 SUPERFAMILY SSF48008 81 216 6.02E-27 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AMIS_40020 ce9a1030afb5e28e9ddc2d9c9053cc50 223 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 75 2.6E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_40020 ce9a1030afb5e28e9ddc2d9c9053cc50 223 SMART SM00345 17 75 1.0E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_40020 ce9a1030afb5e28e9ddc2d9c9053cc50 223 Gene3D G3DSA:1.10.10.10 5 75 3.8E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_40020 ce9a1030afb5e28e9ddc2d9c9053cc50 223 SMART SM00895 85 209 1.2E-19 T 14-10-2018 IPR011711 GntR, C-terminal AMIS_40020 ce9a1030afb5e28e9ddc2d9c9053cc50 223 Pfam PF07729 FCD domain 85 208 6.1E-25 T 14-10-2018 IPR011711 GntR, C-terminal AMIS_40020 ce9a1030afb5e28e9ddc2d9c9053cc50 223 Gene3D G3DSA:1.20.120.530 79 219 2.1E-28 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AMIS_40020 ce9a1030afb5e28e9ddc2d9c9053cc50 223 SUPERFAMILY SSF46785 9 104 2.44E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_24840 6d6dc97c5ccb12e0ad144e661a1f4564 119 Pfam PF13564 DoxX-like family 14 110 4.3E-13 T 14-10-2018 IPR032808 DoxX family AMIS_35630 d9c01688b38ff7e05e6370b3e3e342d0 276 Gene3D G3DSA:3.20.20.100 6 274 5.9E-78 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMIS_35630 d9c01688b38ff7e05e6370b3e3e342d0 276 SUPERFAMILY SSF51430 4 268 1.27E-71 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMIS_35630 d9c01688b38ff7e05e6370b3e3e342d0 276 Pfam PF00248 Aldo/keto reductase family 14 268 8.1E-55 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain AMIS_21580 c89b0c19d8570cb4e62cc2df1f37e016 626 SUPERFAMILY SSF52540 355 617 4.44E-81 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_21580 c89b0c19d8570cb4e62cc2df1f37e016 626 SUPERFAMILY SSF90123 30 350 1.31E-71 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMIS_21580 c89b0c19d8570cb4e62cc2df1f37e016 626 Gene3D G3DSA:3.40.50.300 353 621 3.1E-83 T 14-10-2018 AMIS_21580 c89b0c19d8570cb4e62cc2df1f37e016 626 SMART SM00382 406 592 1.0E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_21580 c89b0c19d8570cb4e62cc2df1f37e016 626 Pfam PF00664 ABC transporter transmembrane region 46 313 1.4E-37 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AMIS_21580 c89b0c19d8570cb4e62cc2df1f37e016 626 ProSitePatterns PS00211 ABC transporters family signature. 518 532 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_21580 c89b0c19d8570cb4e62cc2df1f37e016 626 Pfam PF00005 ABC transporter 397 546 4.2E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_21580 c89b0c19d8570cb4e62cc2df1f37e016 626 Gene3D G3DSA:1.20.1560.10 9 348 2.6E-78 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMIS_7850 aa01adf20ffd9231f66ea171d75532b4 333 Gene3D G3DSA:3.40.50.300 40 323 1.4E-101 T 14-10-2018 AMIS_7850 aa01adf20ffd9231f66ea171d75532b4 333 PIRSF PIRSF028756 48 328 5.5E-120 T 14-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 AMIS_7850 aa01adf20ffd9231f66ea171d75532b4 333 SUPERFAMILY SSF52540 107 293 5.82E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_7850 aa01adf20ffd9231f66ea171d75532b4 333 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 77 302 3.3E-115 T 14-10-2018 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 KEGG: 00190+2.7.4.1 AMIS_7850 aa01adf20ffd9231f66ea171d75532b4 333 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 78 300 1.1E-103 T 14-10-2018 IPR022488 Polyphosphate kinase-2-related AMIS_33260 bd60911add707cd05251f1c7a1ecce77 100 SUPERFAMILY SSF57716 67 98 1.05E-8 T 14-10-2018 AMIS_33260 bd60911add707cd05251f1c7a1ecce77 100 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 65 98 1.4E-13 T 14-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AMIS_33260 bd60911add707cd05251f1c7a1ecce77 100 Gene3D G3DSA:1.20.120.910 4 100 5.1E-23 T 14-10-2018 AMIS_44920 bd94b858c2dfbd6de8cdae754abb86bc 137 Gene3D G3DSA:2.30.110.10 1 134 1.9E-18 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AMIS_44920 bd94b858c2dfbd6de8cdae754abb86bc 137 SUPERFAMILY SSF50475 4 128 5.05E-18 T 14-10-2018 AMIS_44920 bd94b858c2dfbd6de8cdae754abb86bc 137 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 9 90 7.1E-8 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AMIS_75390 6077bd6fb4baf1b8f1e5a7e2e8c262ed 287 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 17 257 1.8E-49 T 14-10-2018 IPR018713 Domain of unknown function DUF2236 AMIS_55330 d6a92e4d9ba4295ff15dea790419a5cf 354 Pfam PF00294 pfkB family carbohydrate kinase 37 290 1.8E-32 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB AMIS_55330 d6a92e4d9ba4295ff15dea790419a5cf 354 Gene3D G3DSA:3.40.1190.20 2 312 1.0E-52 T 14-10-2018 IPR029056 Ribokinase-like AMIS_55330 d6a92e4d9ba4295ff15dea790419a5cf 354 SUPERFAMILY SSF53613 6 299 4.21E-50 T 14-10-2018 IPR029056 Ribokinase-like AMIS_55330 d6a92e4d9ba4295ff15dea790419a5cf 354 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 243 256 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AMIS_65610 704676e31a6f3300417f368340f19205 293 Pfam PF01965 DJ-1/PfpI family 1 161 5.4E-20 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 AMIS_65610 704676e31a6f3300417f368340f19205 293 Pfam PF12833 Helix-turn-helix domain 223 285 1.6E-14 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMIS_65610 704676e31a6f3300417f368340f19205 293 SMART SM00342 217 289 1.0E-8 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMIS_65610 704676e31a6f3300417f368340f19205 293 Gene3D G3DSA:3.40.50.880 1 200 2.7E-54 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_65610 704676e31a6f3300417f368340f19205 293 SUPERFAMILY SSF52317 1 182 3.27E-44 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_65610 704676e31a6f3300417f368340f19205 293 SUPERFAMILY SSF46689 201 252 6.57E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_65610 704676e31a6f3300417f368340f19205 293 Gene3D G3DSA:1.10.10.60 201 290 5.0E-20 T 14-10-2018 AMIS_10150 bb9507028a2986834f40235ae97139c1 245 PIRSF PIRSF006648 2 244 9.2E-47 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AMIS_10150 bb9507028a2986834f40235ae97139c1 245 Pfam PF01061 ABC-2 type transporter 8 209 1.3E-29 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 AMIS_7390 39c70cdb7db2e78adbdcdc5f11f85191 506 Pfam PF14306 PUA-like domain 17 109 1.2E-15 T 14-10-2018 IPR025980 ATP-sulfurylase PUA-like domain KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 AMIS_7390 39c70cdb7db2e78adbdcdc5f11f85191 506 Gene3D G3DSA:3.40.50.620 131 318 6.8E-19 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMIS_7390 39c70cdb7db2e78adbdcdc5f11f85191 506 SUPERFAMILY SSF52540 324 497 3.54E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_7390 39c70cdb7db2e78adbdcdc5f11f85191 506 SUPERFAMILY SSF52374 131 317 7.2E-14 T 14-10-2018 AMIS_7390 39c70cdb7db2e78adbdcdc5f11f85191 506 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 320 494 1.1E-52 T 14-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 AMIS_7390 39c70cdb7db2e78adbdcdc5f11f85191 506 Gene3D G3DSA:3.40.50.300 319 504 6.6E-67 T 14-10-2018 AMIS_7390 39c70cdb7db2e78adbdcdc5f11f85191 506 Pfam PF01583 Adenylylsulphate kinase 325 481 9.0E-56 T 14-10-2018 AMIS_7390 39c70cdb7db2e78adbdcdc5f11f85191 506 Pfam PF01747 ATP-sulfurylase 135 244 2.3E-9 T 14-10-2018 IPR024951 Sulphate adenylyltransferase catalytic domain GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 AMIS_7390 39c70cdb7db2e78adbdcdc5f11f85191 506 SUPERFAMILY SSF88697 12 119 1.19E-17 T 14-10-2018 IPR015947 PUA-like superfamily AMIS_7390 39c70cdb7db2e78adbdcdc5f11f85191 506 Gene3D G3DSA:3.10.400.10 7 128 3.2E-23 T 14-10-2018 AMIS_33990 d4833c4b285dc6b8ba8cf2f906c77c37 82 Gene3D G3DSA:3.40.50.2020 1 75 2.1E-7 T 14-10-2018 AMIS_33990 d4833c4b285dc6b8ba8cf2f906c77c37 82 SUPERFAMILY SSF53271 3 45 8.13E-8 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like AMIS_73480 665ef55ed608732cf806bdecceeb7ec0 1166 Pfam PF13361 UvrD-like helicase C-terminal domain 352 523 1.3E-12 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AMIS_73480 665ef55ed608732cf806bdecceeb7ec0 1166 Gene3D G3DSA:3.90.320.10 965 1147 8.3E-6 T 14-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal AMIS_73480 665ef55ed608732cf806bdecceeb7ec0 1166 Gene3D G3DSA:3.40.50.300 235 371 1.6E-32 T 14-10-2018 AMIS_73480 665ef55ed608732cf806bdecceeb7ec0 1166 Gene3D G3DSA:3.40.50.300 35 204 6.1E-33 T 14-10-2018 AMIS_73480 665ef55ed608732cf806bdecceeb7ec0 1166 Gene3D G3DSA:3.40.50.300 617 802 7.8E-25 T 14-10-2018 AMIS_73480 665ef55ed608732cf806bdecceeb7ec0 1166 SUPERFAMILY SSF52980 991 1135 1.18E-7 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AMIS_73480 665ef55ed608732cf806bdecceeb7ec0 1166 Pfam PF12705 PD-(D/E)XK nuclease superfamily 990 1142 1.4E-11 T 14-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type AMIS_73480 665ef55ed608732cf806bdecceeb7ec0 1166 Pfam PF00580 UvrD/REP helicase N-terminal domain 39 339 1.2E-48 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AMIS_73480 665ef55ed608732cf806bdecceeb7ec0 1166 SUPERFAMILY SSF52540 36 802 4.11E-112 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_73480 665ef55ed608732cf806bdecceeb7ec0 1166 Gene3D G3DSA:3.40.50.300 405 513 3.3E-17 T 14-10-2018 AMIS_73480 665ef55ed608732cf806bdecceeb7ec0 1166 Pfam PF13361 UvrD-like helicase C-terminal domain 668 777 1.4E-13 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AMIS_43110 2fd927e0414e618d782e407e94ae2c14 496 SUPERFAMILY SSF54631 104 213 2.2E-14 T 14-10-2018 AMIS_43110 2fd927e0414e618d782e407e94ae2c14 496 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 10 482 4.3E-98 T 14-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 AMIS_43110 2fd927e0414e618d782e407e94ae2c14 496 Gene3D G3DSA:3.20.20.70 4 493 6.0E-127 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_43110 2fd927e0414e618d782e407e94ae2c14 496 SUPERFAMILY SSF51412 6 483 7.46E-88 T 14-10-2018 AMIS_43110 2fd927e0414e618d782e407e94ae2c14 496 PIRSF PIRSF000130 10 491 2.2E-120 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 AMIS_43110 2fd927e0414e618d782e407e94ae2c14 496 SMART SM01240 7 486 2.0E-139 T 14-10-2018 AMIS_43110 2fd927e0414e618d782e407e94ae2c14 496 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 308 320 - T 14-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 AMIS_36110 ecdc8fb383c27e7b82432b3166541bd4 385 Gene3D G3DSA:1.10.287.470 104 211 6.8E-52 T 14-10-2018 AMIS_36110 ecdc8fb383c27e7b82432b3166541bd4 385 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 185 382 4.6E-29 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AMIS_36110 ecdc8fb383c27e7b82432b3166541bd4 385 Gene3D G3DSA:2.40.50.100 70 246 6.8E-52 T 14-10-2018 AMIS_36110 ecdc8fb383c27e7b82432b3166541bd4 385 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 60 287 5.2E-13 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMIS_36110 ecdc8fb383c27e7b82432b3166541bd4 385 Gene3D G3DSA:2.40.420.20 54 382 6.8E-52 T 14-10-2018 AMIS_36110 ecdc8fb383c27e7b82432b3166541bd4 385 Gene3D G3DSA:2.40.30.170 59 323 6.8E-52 T 14-10-2018 AMIS_63410 f75bdd8a137b2030f2e6174857f33c73 208 Pfam PF00196 Bacterial regulatory proteins, luxR family 144 198 1.6E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_63410 f75bdd8a137b2030f2e6174857f33c73 208 SMART SM00448 2 115 1.9E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_63410 f75bdd8a137b2030f2e6174857f33c73 208 SUPERFAMILY SSF46894 137 205 1.6E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_63410 f75bdd8a137b2030f2e6174857f33c73 208 SUPERFAMILY SSF52172 4 133 4.13E-34 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_63410 f75bdd8a137b2030f2e6174857f33c73 208 SMART SM00421 142 199 8.5E-25 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_63410 f75bdd8a137b2030f2e6174857f33c73 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 175 187 2.7E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_63410 f75bdd8a137b2030f2e6174857f33c73 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 175 2.7E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_63410 f75bdd8a137b2030f2e6174857f33c73 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 145 159 2.7E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_63410 f75bdd8a137b2030f2e6174857f33c73 208 Gene3D G3DSA:3.40.50.12740 2 205 1.5E-68 T 14-10-2018 AMIS_63410 f75bdd8a137b2030f2e6174857f33c73 208 Pfam PF00072 Response regulator receiver domain 5 115 7.8E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_47670 12bbfebba7c8b55ba935ca777083b1fc 287 Gene3D G3DSA:1.10.10.10 1 87 1.2E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_47670 12bbfebba7c8b55ba935ca777083b1fc 287 Gene3D G3DSA:3.40.190.10 91 277 2.2E-21 T 14-10-2018 AMIS_47670 12bbfebba7c8b55ba935ca777083b1fc 287 SUPERFAMILY SSF53850 90 283 7.42E-21 T 14-10-2018 AMIS_47670 12bbfebba7c8b55ba935ca777083b1fc 287 SUPERFAMILY SSF46785 2 82 1.15E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_47670 12bbfebba7c8b55ba935ca777083b1fc 287 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 3.1E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_47670 12bbfebba7c8b55ba935ca777083b1fc 287 Pfam PF03466 LysR substrate binding domain 91 280 2.3E-20 T 14-10-2018 IPR005119 LysR, substrate-binding AMIS_47670 12bbfebba7c8b55ba935ca777083b1fc 287 Gene3D G3DSA:3.40.190.10 159 257 2.2E-21 T 14-10-2018 AMIS_47670 12bbfebba7c8b55ba935ca777083b1fc 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 9.4E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_47670 12bbfebba7c8b55ba935ca777083b1fc 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 9.4E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_47670 12bbfebba7c8b55ba935ca777083b1fc 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 9.4E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_64060 03a5f0c990614eec686de3be9f298010 346 Pfam PF07676 WD40-like Beta Propeller Repeat 124 144 6.7E-7 T 14-10-2018 IPR011659 WD40-like Beta Propeller AMIS_64060 03a5f0c990614eec686de3be9f298010 346 Pfam PF07676 WD40-like Beta Propeller Repeat 195 208 0.042 T 14-10-2018 IPR011659 WD40-like Beta Propeller AMIS_64060 03a5f0c990614eec686de3be9f298010 346 Pfam PF07676 WD40-like Beta Propeller Repeat 81 104 0.0014 T 14-10-2018 IPR011659 WD40-like Beta Propeller AMIS_64060 03a5f0c990614eec686de3be9f298010 346 Gene3D G3DSA:2.120.10.30 38 176 5.6E-23 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AMIS_64060 03a5f0c990614eec686de3be9f298010 346 Gene3D G3DSA:2.120.10.30 178 345 3.4E-11 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AMIS_64060 03a5f0c990614eec686de3be9f298010 346 SUPERFAMILY SSF82171 76 328 2.09E-26 T 14-10-2018 AMIS_80600 4fdf82606a72867acdedd787041e8009 193 Gene3D G3DSA:3.90.550.10 1 193 8.1E-39 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_80600 4fdf82606a72867acdedd787041e8009 193 Pfam PF12804 MobA-like NTP transferase domain 1 159 1.2E-26 T 14-10-2018 IPR025877 MobA-like NTP transferase AMIS_80600 4fdf82606a72867acdedd787041e8009 193 SUPERFAMILY SSF53448 1 185 9.75E-24 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_6590 196149f8707309f7062c6473d594b5ed 388 Pfam PF00155 Aminotransferase class I and II 31 384 3.4E-61 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMIS_6590 196149f8707309f7062c6473d594b5ed 388 Gene3D G3DSA:3.90.1150.10 20 384 5.7E-140 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMIS_6590 196149f8707309f7062c6473d594b5ed 388 SUPERFAMILY SSF53383 9 385 1.33E-102 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_6590 196149f8707309f7062c6473d594b5ed 388 Gene3D G3DSA:3.40.640.10 43 284 5.7E-140 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_27360 081f3a698e1f081fe25a4409465b9778 517 Pfam PF07690 Major Facilitator Superfamily 28 418 8.4E-49 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_27360 081f3a698e1f081fe25a4409465b9778 517 ProSitePatterns PS00216 Sugar transport proteins signature 1. 77 94 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AMIS_27360 081f3a698e1f081fe25a4409465b9778 517 Gene3D G3DSA:1.20.1720.10 23 254 3.1E-39 T 14-10-2018 AMIS_27360 081f3a698e1f081fe25a4409465b9778 517 Gene3D G3DSA:1.20.1250.20 276 510 3.5E-22 T 14-10-2018 AMIS_27360 081f3a698e1f081fe25a4409465b9778 517 SUPERFAMILY SSF103473 13 510 4.05E-67 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_26130 0f38aac1f57da7bdb0a2407fa6c13f18 221 SMART SM00382 31 218 6.9E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_26130 0f38aac1f57da7bdb0a2407fa6c13f18 221 SUPERFAMILY SSF52540 6 220 1.33E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_26130 0f38aac1f57da7bdb0a2407fa6c13f18 221 Pfam PF00005 ABC transporter 23 170 7.1E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_26130 0f38aac1f57da7bdb0a2407fa6c13f18 221 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_26130 0f38aac1f57da7bdb0a2407fa6c13f18 221 Gene3D G3DSA:3.40.50.300 3 221 1.2E-66 T 14-10-2018 AMIS_14100 bcab80a54a86060bb2accad0f189868c 122 Gene3D G3DSA:2.60.300.12 17 122 2.0E-29 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 AMIS_14100 bcab80a54a86060bb2accad0f189868c 122 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 18 122 5.2E-36 T 14-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 AMIS_14100 bcab80a54a86060bb2accad0f189868c 122 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 104 121 - T 14-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 AMIS_14100 bcab80a54a86060bb2accad0f189868c 122 Pfam PF01521 Iron-sulphur cluster biosynthesis 18 119 6.9E-19 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AMIS_14100 bcab80a54a86060bb2accad0f189868c 122 SUPERFAMILY SSF89360 18 112 4.71E-27 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 AMIS_80630 abcb3a75cf39901d56f6f7aa7efc48be 352 SUPERFAMILY SSF56300 21 293 9.1E-22 T 14-10-2018 AMIS_80630 abcb3a75cf39901d56f6f7aa7efc48be 352 Pfam PF09423 PhoD-like phosphatase 7 292 1.6E-93 T 14-10-2018 IPR018946 Alkaline phosphatase D-related AMIS_80630 abcb3a75cf39901d56f6f7aa7efc48be 352 Gene3D G3DSA:3.60.21.70 1 349 5.9E-118 T 14-10-2018 IPR038607 PhoD-like superfamily AMIS_44630 a7838fea53f2228a263c7d97ae54f06e 695 Gene3D G3DSA:1.10.3470.10 19 357 5.0E-73 T 14-10-2018 IPR037294 ABC transporter, BtuC-like AMIS_44630 a7838fea53f2228a263c7d97ae54f06e 695 Gene3D G3DSA:1.10.3470.10 370 695 4.3E-85 T 14-10-2018 IPR037294 ABC transporter, BtuC-like AMIS_44630 a7838fea53f2228a263c7d97ae54f06e 695 Pfam PF01032 FecCD transport family 384 692 7.6E-78 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AMIS_44630 a7838fea53f2228a263c7d97ae54f06e 695 Pfam PF01032 FecCD transport family 34 352 2.9E-62 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AMIS_44630 a7838fea53f2228a263c7d97ae54f06e 695 SUPERFAMILY SSF81345 368 692 1.7E-70 T 14-10-2018 IPR037294 ABC transporter, BtuC-like AMIS_44630 a7838fea53f2228a263c7d97ae54f06e 695 SUPERFAMILY SSF81345 23 352 9.02E-54 T 14-10-2018 IPR037294 ABC transporter, BtuC-like AMIS_65640 e52d518909347357c517165a3b25e723 233 SUPERFAMILY SSF46955 6 90 6.87E-13 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily AMIS_65640 e52d518909347357c517165a3b25e723 233 Pfam PF00376 MerR family regulatory protein 5 40 1.5E-11 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_65640 e52d518909347357c517165a3b25e723 233 SUPERFAMILY SSF46955 120 225 4.07E-13 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily AMIS_65640 e52d518909347357c517165a3b25e723 233 Pfam PF13411 MerR HTH family regulatory protein 120 184 9.9E-11 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_65640 e52d518909347357c517165a3b25e723 233 Gene3D G3DSA:1.10.1660.10 111 230 1.7E-15 T 14-10-2018 AMIS_65640 e52d518909347357c517165a3b25e723 233 SMART SM00422 119 186 7.1E-4 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_65640 e52d518909347357c517165a3b25e723 233 SMART SM00422 2 70 1.9E-4 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_65640 e52d518909347357c517165a3b25e723 233 ProSitePatterns PS00552 MerR-type HTH domain signature. 122 144 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_65640 e52d518909347357c517165a3b25e723 233 Gene3D G3DSA:1.10.1660.10 3 106 4.1E-14 T 14-10-2018 AMIS_21930 428450363b2b6296ac31b671c0ae3a5d 397 Gene3D G3DSA:2.60.120.310 72 215 2.3E-14 T 14-10-2018 IPR036939 Copper type II, ascorbate-dependent monooxygenase, N-terminal domain superfamily GO:0004497|GO:0005507|GO:0016715|GO:0055114 AMIS_21930 428450363b2b6296ac31b671c0ae3a5d 397 Pfam PF03712 Copper type II ascorbate-dependent monooxygenase, C-terminal domain 287 389 1.6E-8 T 14-10-2018 IPR024548 Copper type II ascorbate-dependent monooxygenase, C-terminal AMIS_21930 428450363b2b6296ac31b671c0ae3a5d 397 Gene3D G3DSA:2.60.120.230 276 396 2.2E-7 T 14-10-2018 IPR014784 Copper type II, ascorbate-dependent monooxygenase-like, C-terminal GO:0016715|GO:0055114 AMIS_21930 428450363b2b6296ac31b671c0ae3a5d 397 SUPERFAMILY SSF49742 64 212 1.41E-28 T 14-10-2018 IPR008977 PHM/PNGase F domain superfamily GO:0003824 AMIS_21930 428450363b2b6296ac31b671c0ae3a5d 397 SUPERFAMILY SSF49742 300 392 2.67E-12 T 14-10-2018 IPR008977 PHM/PNGase F domain superfamily GO:0003824 AMIS_11420 b89c13b327908ae155be5197ebe7b40b 244 Pfam PF10105 Uncharacterized protein conserved in bacteria (DUF2344) 3 193 7.1E-50 T 14-10-2018 IPR018768 Domain of unknown function DUF2344 AMIS_11420 b89c13b327908ae155be5197ebe7b40b 244 TIGRFAM TIGR03936 sam_1_link_chp: radical SAM-linked protein 3 205 9.7E-56 T 14-10-2018 IPR018768 Domain of unknown function DUF2344 AMIS_22530 60020aa40da956d134890db4d9a7bf25 134 PIRSF PIRSF028777 11 134 3.7E-44 T 14-10-2018 IPR031308 Uncharacterised conserved protein UCP028777 AMIS_22530 60020aa40da956d134890db4d9a7bf25 134 Pfam PF03733 Inner membrane component domain 14 64 1.1E-17 T 14-10-2018 IPR005185 Inner membrane component domain AMIS_22530 60020aa40da956d134890db4d9a7bf25 134 Pfam PF03733 Inner membrane component domain 78 128 1.3E-18 T 14-10-2018 IPR005185 Inner membrane component domain AMIS_55490 1a0af523be949bdbe0ef06dfe9e0ff86 285 Gene3D G3DSA:1.10.3720.10 5 275 8.0E-58 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_55490 1a0af523be949bdbe0ef06dfe9e0ff86 285 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 97 273 1.2E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_55490 1a0af523be949bdbe0ef06dfe9e0ff86 285 SUPERFAMILY SSF161098 9 284 6.98E-58 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_59930 af51b45c56ee94024186923ef9496e13 258 Pfam PF09339 IclR helix-turn-helix domain 11 60 1.3E-14 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AMIS_59930 af51b45c56ee94024186923ef9496e13 258 SUPERFAMILY SSF55781 77 252 5.89E-39 T 14-10-2018 AMIS_59930 af51b45c56ee94024186923ef9496e13 258 Pfam PF01614 Bacterial transcriptional regulator 128 249 1.4E-28 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal AMIS_59930 af51b45c56ee94024186923ef9496e13 258 Gene3D G3DSA:3.30.450.40 87 256 1.4E-43 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_59930 af51b45c56ee94024186923ef9496e13 258 SUPERFAMILY SSF46785 9 82 1.37E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_59930 af51b45c56ee94024186923ef9496e13 258 Gene3D G3DSA:1.10.10.10 5 82 6.5E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_59930 af51b45c56ee94024186923ef9496e13 258 SMART SM00346 9 99 5.1E-8 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AMIS_40670 078e59a86733704c8839b62ecc3195d3 292 Pfam PF06271 RDD family 20 158 4.8E-16 T 14-10-2018 IPR010432 RDD AMIS_75090 fd86e1d0353591d27794a988cbed7cca 122 Gene3D G3DSA:3.90.1570.10 15 106 2.2E-7 T 14-10-2018 AMIS_57210 f5785dab8e4abc73dd1f3ce3dd4bfcb8 471 Pfam PF00171 Aldehyde dehydrogenase family 7 445 6.7E-117 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AMIS_57210 f5785dab8e4abc73dd1f3ce3dd4bfcb8 471 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 253 264 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AMIS_57210 f5785dab8e4abc73dd1f3ce3dd4bfcb8 471 Gene3D G3DSA:3.40.605.10 7 443 4.8E-126 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AMIS_57210 f5785dab8e4abc73dd1f3ce3dd4bfcb8 471 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 224 231 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AMIS_57210 f5785dab8e4abc73dd1f3ce3dd4bfcb8 471 Gene3D G3DSA:3.40.309.10 231 420 4.8E-126 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AMIS_57210 f5785dab8e4abc73dd1f3ce3dd4bfcb8 471 SUPERFAMILY SSF53720 8 445 3.8E-117 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMIS_40130 4f900b570e7fab7fee39deda3f8f1c12 201 Gene3D G3DSA:1.20.120.700 6 163 1.3E-9 T 14-10-2018 AMIS_40130 4f900b570e7fab7fee39deda3f8f1c12 201 Gene3D G3DSA:1.10.4070.10 69 150 1.3E-9 T 14-10-2018 AMIS_40130 4f900b570e7fab7fee39deda3f8f1c12 201 SUPERFAMILY SSF89155 2 165 4.32E-29 T 14-10-2018 IPR036411 TorD-like superfamily AMIS_40130 4f900b570e7fab7fee39deda3f8f1c12 201 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 10 161 4.0E-38 T 14-10-2018 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 AMIS_40130 4f900b570e7fab7fee39deda3f8f1c12 201 Pfam PF02613 Nitrate reductase delta subunit 56 154 5.9E-9 T 14-10-2018 IPR020945 DMSO/Nitrate reductase chaperone AMIS_760 85566d380d3c169c02896e18132af8e2 485 Pfam PF02817 e3 binding domain 191 226 1.6E-12 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 AMIS_760 85566d380d3c169c02896e18132af8e2 485 Gene3D G3DSA:3.30.559.10 238 482 2.6E-77 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AMIS_760 85566d380d3c169c02896e18132af8e2 485 SUPERFAMILY SSF52777 247 481 7.12E-76 T 14-10-2018 AMIS_760 85566d380d3c169c02896e18132af8e2 485 Pfam PF00364 Biotin-requiring enzyme 8 81 6.7E-22 T 14-10-2018 IPR000089 Biotin/lipoyl attachment AMIS_760 85566d380d3c169c02896e18132af8e2 485 Gene3D G3DSA:4.10.320.10 181 232 8.8E-15 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 AMIS_760 85566d380d3c169c02896e18132af8e2 485 SUPERFAMILY SSF51230 5 100 1.7E-26 T 14-10-2018 IPR011053 Single hybrid motif AMIS_760 85566d380d3c169c02896e18132af8e2 485 Gene3D G3DSA:2.40.50.100 3 103 1.2E-24 T 14-10-2018 AMIS_760 85566d380d3c169c02896e18132af8e2 485 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 32 61 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AMIS_760 85566d380d3c169c02896e18132af8e2 485 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 253 482 3.2E-77 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 AMIS_760 85566d380d3c169c02896e18132af8e2 485 SUPERFAMILY SSF47005 188 230 1.44E-10 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 AMIS_61350 6c8e0809a93bec41ee46c56a2afb40e6 238 PIRSF PIRSF000709 8 189 2.0E-15 T 14-10-2018 AMIS_61350 6c8e0809a93bec41ee46c56a2afb40e6 238 SMART SM00855 6 173 2.6E-11 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AMIS_61350 6c8e0809a93bec41ee46c56a2afb40e6 238 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 9 215 1.0E-39 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AMIS_61350 6c8e0809a93bec41ee46c56a2afb40e6 238 SUPERFAMILY SSF53254 7 221 1.24E-44 T 14-10-2018 IPR029033 Histidine phosphatase superfamily AMIS_61350 6c8e0809a93bec41ee46c56a2afb40e6 238 Gene3D G3DSA:3.40.50.1240 7 224 1.6E-44 T 14-10-2018 IPR029033 Histidine phosphatase superfamily AMIS_80290 fa80df79dcabb4c092a499668e918669 259 Gene3D G3DSA:3.40.50.300 5 250 2.2E-54 T 14-10-2018 AMIS_80290 fa80df79dcabb4c092a499668e918669 259 SUPERFAMILY SSF52540 13 234 1.36E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_80290 fa80df79dcabb4c092a499668e918669 259 Pfam PF00005 ABC transporter 31 173 5.7E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_80290 fa80df79dcabb4c092a499668e918669 259 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_80290 fa80df79dcabb4c092a499668e918669 259 SMART SM00382 39 229 1.4E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_44670 827d8bdfd7a5c0c27abd9bfd12dd4db4 308 Gene3D G3DSA:3.20.20.100 14 303 1.7E-68 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMIS_44670 827d8bdfd7a5c0c27abd9bfd12dd4db4 308 SUPERFAMILY SSF51430 18 294 2.75E-64 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMIS_44670 827d8bdfd7a5c0c27abd9bfd12dd4db4 308 Pfam PF00248 Aldo/keto reductase family 23 292 1.7E-49 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain AMIS_44670 827d8bdfd7a5c0c27abd9bfd12dd4db4 308 PRINTS PR00069 Aldo-keto reductase signature 149 166 2.4E-5 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMIS_44670 827d8bdfd7a5c0c27abd9bfd12dd4db4 308 PRINTS PR00069 Aldo-keto reductase signature 52 76 2.4E-5 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMIS_63370 8aeed323200205583c00b1a84868284a 288 Pfam PF12833 Helix-turn-helix domain 182 259 3.3E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMIS_63370 8aeed323200205583c00b1a84868284a 288 SUPERFAMILY SSF46689 213 259 1.66E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_63370 8aeed323200205583c00b1a84868284a 288 Gene3D G3DSA:1.10.10.60 164 261 5.5E-19 T 14-10-2018 AMIS_63370 8aeed323200205583c00b1a84868284a 288 SMART SM00342 176 258 1.4E-14 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMIS_26200 bfb3c287fbf1f039031a9a05fc5481f8 219 Gene3D G3DSA:3.40.50.12740 3 215 2.4E-72 T 14-10-2018 AMIS_26200 bfb3c287fbf1f039031a9a05fc5481f8 219 Pfam PF00072 Response regulator receiver domain 5 117 1.6E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_26200 bfb3c287fbf1f039031a9a05fc5481f8 219 ProSitePatterns PS00622 LuxR-type HTH domain signature. 169 196 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_26200 bfb3c287fbf1f039031a9a05fc5481f8 219 SUPERFAMILY SSF46894 140 216 2.52E-23 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_26200 bfb3c287fbf1f039031a9a05fc5481f8 219 SUPERFAMILY SSF52172 1 135 1.27E-34 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_26200 bfb3c287fbf1f039031a9a05fc5481f8 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 169 2.7E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_26200 bfb3c287fbf1f039031a9a05fc5481f8 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 185 2.7E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_26200 bfb3c287fbf1f039031a9a05fc5481f8 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 197 2.7E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_26200 bfb3c287fbf1f039031a9a05fc5481f8 219 SMART SM00421 152 209 7.9E-28 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_26200 bfb3c287fbf1f039031a9a05fc5481f8 219 Pfam PF00196 Bacterial regulatory proteins, luxR family 154 209 1.7E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_26200 bfb3c287fbf1f039031a9a05fc5481f8 219 SMART SM00448 3 116 6.2E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_14250 eb8c832a4c613288360550ecfe04ba97 95 Pfam PF01037 Lrp/AsnC ligand binding domain 6 76 6.5E-15 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMIS_14250 eb8c832a4c613288360550ecfe04ba97 95 Gene3D G3DSA:3.30.70.920 2 74 5.5E-19 T 14-10-2018 AMIS_14250 eb8c832a4c613288360550ecfe04ba97 95 SUPERFAMILY SSF54909 3 78 8.04E-18 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel AMIS_47520 3f08d1eeca39a6ab3e90267dd2cc3fbb 112 Hamap MF_01483 RNA polymerase-binding protein RbpA [rbpA]. 16 112 24.973 T 14-10-2018 IPR025182 RNA polymerase-binding protein RbpA GO:0001000|GO:0045893 AMIS_47520 3f08d1eeca39a6ab3e90267dd2cc3fbb 112 Pfam PF13397 RNA polymerase-binding protein 4 107 1.2E-42 T 14-10-2018 IPR025182 RNA polymerase-binding protein RbpA GO:0001000|GO:0045893 AMIS_47520 3f08d1eeca39a6ab3e90267dd2cc3fbb 112 Gene3D G3DSA:2.20.28.270 1 80 5.0E-35 T 14-10-2018 IPR038638 RbpA superfamily AMIS_71170 136485df4bd0e5db8cb12b5cfaec03a6 343 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 237 256 - T 14-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 AMIS_71170 136485df4bd0e5db8cb12b5cfaec03a6 343 SMART SM01329 5 339 6.7E-158 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AMIS_71170 136485df4bd0e5db8cb12b5cfaec03a6 343 Gene3D G3DSA:3.40.718.10 3 343 8.4E-126 T 14-10-2018 AMIS_71170 136485df4bd0e5db8cb12b5cfaec03a6 343 SUPERFAMILY SSF53659 5 341 2.88E-108 T 14-10-2018 AMIS_71170 136485df4bd0e5db8cb12b5cfaec03a6 343 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 325 1.4E-87 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AMIS_24110 3017c7938a67f40acd518ff51a9fbdd3 154 Gene3D G3DSA:3.80.10.10 2 150 4.0E-9 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily AMIS_24110 3017c7938a67f40acd518ff51a9fbdd3 154 SUPERFAMILY SSF52058 11 142 3.23E-6 T 14-10-2018 AMIS_20930 cffb76d9de81b26ee124ae5b32f305a2 697 Pfam PF06074 Protein of unknown function (DUF935) 238 504 4.1E-9 T 14-10-2018 IPR009279 Protein of unknown function DUF935 AMIS_56390 f135e313ab1e1a63bcad0fc3c4f6a24f 704 Pfam PF05787 Bacterial protein of unknown function (DUF839) 108 667 2.1E-163 T 14-10-2018 IPR008557 Protein of unknown function DUF839 AMIS_32740 31fc544c8b06ac2916421ace262c4172 189 Pfam PF03029 Conserved hypothetical ATP binding protein 13 177 1.9E-22 T 14-10-2018 IPR004130 GPN-loop GTPase AMIS_32740 31fc544c8b06ac2916421ace262c4172 189 Gene3D G3DSA:3.40.50.300 3 185 2.1E-16 T 14-10-2018 AMIS_32740 31fc544c8b06ac2916421ace262c4172 189 PRINTS PR00449 Transforming protein P21 ras signature 157 179 1.4E-6 T 14-10-2018 AMIS_32740 31fc544c8b06ac2916421ace262c4172 189 PRINTS PR00449 Transforming protein P21 ras signature 9 30 1.4E-6 T 14-10-2018 AMIS_32740 31fc544c8b06ac2916421ace262c4172 189 PRINTS PR00449 Transforming protein P21 ras signature 67 89 1.4E-6 T 14-10-2018 AMIS_32740 31fc544c8b06ac2916421ace262c4172 189 SUPERFAMILY SSF52540 8 181 1.47E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_14690 3e21cb84bb9fbeaafd8d0e6aab5e98df 468 SUPERFAMILY SSF51569 31 467 8.79E-187 T 14-10-2018 AMIS_14690 3e21cb84bb9fbeaafd8d0e6aab5e98df 468 Pfam PF01474 Class-II DAHP synthetase family 36 463 4.9E-186 T 14-10-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AMIS_14690 3e21cb84bb9fbeaafd8d0e6aab5e98df 468 Gene3D G3DSA:3.20.20.70 218 468 4.6E-103 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_14690 3e21cb84bb9fbeaafd8d0e6aab5e98df 468 TIGRFAM TIGR01358 DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 36 467 2.3E-202 T 14-10-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AMIS_12460 78a815cd5783cbaf949624c5b3cf29d8 218 SUPERFAMILY SSF53955 145 210 3.94E-8 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily AMIS_35520 d162a550f670799e9e305daad108823e 161 Gene3D G3DSA:3.40.630.30 10 151 8.0E-23 T 14-10-2018 AMIS_35520 d162a550f670799e9e305daad108823e 161 Pfam PF00583 Acetyltransferase (GNAT) family 54 143 6.7E-9 T 14-10-2018 IPR000182 GNAT domain AMIS_35520 d162a550f670799e9e305daad108823e 161 SUPERFAMILY SSF55729 10 142 2.3E-15 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_78460 f18345e0c93d0aacc38f0a51335497ab 346 Gene3D G3DSA:3.40.50.300 10 341 8.2E-95 T 14-10-2018 AMIS_78460 f18345e0c93d0aacc38f0a51335497ab 346 SUPERFAMILY SSF52540 12 262 3.06E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_78460 f18345e0c93d0aacc38f0a51335497ab 346 SMART SM00382 40 241 2.1E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_78460 f18345e0c93d0aacc38f0a51335497ab 346 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_78460 f18345e0c93d0aacc38f0a51335497ab 346 Pfam PF00005 ABC transporter 34 191 2.6E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_78460 f18345e0c93d0aacc38f0a51335497ab 346 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 241 328 5.1E-21 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMIS_78460 f18345e0c93d0aacc38f0a51335497ab 346 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 304 6.4E-19 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMIS_65490 46ceb932a91a54be38364f733665f234 343 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 191 196 - T 14-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 AMIS_65490 46ceb932a91a54be38364f733665f234 343 PIRSF PIRSF001134 22 343 2.4E-103 T 14-10-2018 IPR001316 Peptidase S1A, streptogrisin GO:0004252|GO:0006508 AMIS_65490 46ceb932a91a54be38364f733665f234 343 Pfam PF02983 Alpha-lytic protease prodomain 89 143 3.8E-10 T 14-10-2018 IPR004236 Peptidase S1A, alpha-lytic prodomain GO:0005576|GO:0006508|GO:0008236 AMIS_65490 46ceb932a91a54be38364f733665f234 343 Gene3D G3DSA:2.40.10.10 161 237 8.3E-30 T 14-10-2018 AMIS_65490 46ceb932a91a54be38364f733665f234 343 SUPERFAMILY SSF50494 167 336 5.28E-32 T 14-10-2018 IPR009003 Peptidase S1, PA clan AMIS_65490 46ceb932a91a54be38364f733665f234 343 Pfam PF00089 Trypsin 188 332 2.4E-8 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 AMIS_65490 46ceb932a91a54be38364f733665f234 343 PRINTS PR00861 Alpha-lytic endopeptidase serine protease (S2A) signature 189 203 1.7E-45 T 14-10-2018 IPR001316 Peptidase S1A, streptogrisin GO:0004252|GO:0006508 AMIS_65490 46ceb932a91a54be38364f733665f234 343 PRINTS PR00861 Alpha-lytic endopeptidase serine protease (S2A) signature 244 264 1.7E-45 T 14-10-2018 IPR001316 Peptidase S1A, streptogrisin GO:0004252|GO:0006508 AMIS_65490 46ceb932a91a54be38364f733665f234 343 PRINTS PR00861 Alpha-lytic endopeptidase serine protease (S2A) signature 284 307 1.7E-45 T 14-10-2018 IPR001316 Peptidase S1A, streptogrisin GO:0004252|GO:0006508 AMIS_65490 46ceb932a91a54be38364f733665f234 343 PRINTS PR00861 Alpha-lytic endopeptidase serine protease (S2A) signature 308 322 1.7E-45 T 14-10-2018 IPR001316 Peptidase S1A, streptogrisin GO:0004252|GO:0006508 AMIS_65490 46ceb932a91a54be38364f733665f234 343 PRINTS PR00861 Alpha-lytic endopeptidase serine protease (S2A) signature 265 282 1.7E-45 T 14-10-2018 IPR001316 Peptidase S1A, streptogrisin GO:0004252|GO:0006508 AMIS_65490 46ceb932a91a54be38364f733665f234 343 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 293 304 - T 14-10-2018 IPR033116 Serine proteases, trypsin family, serine active site AMIS_65490 46ceb932a91a54be38364f733665f234 343 Gene3D G3DSA:2.40.10.10 238 330 1.1E-32 T 14-10-2018 AMIS_47070 9d58c1754a3f8f96180cf6033b47fcd9 201 SMART SM00421 138 195 2.5E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_47070 9d58c1754a3f8f96180cf6033b47fcd9 201 SUPERFAMILY SSF52172 1 129 2.13E-31 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_47070 9d58c1754a3f8f96180cf6033b47fcd9 201 SMART SM00448 2 115 3.1E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_47070 9d58c1754a3f8f96180cf6033b47fcd9 201 SUPERFAMILY SSF46894 124 201 2.52E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_47070 9d58c1754a3f8f96180cf6033b47fcd9 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 171 7.0E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_47070 9d58c1754a3f8f96180cf6033b47fcd9 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 141 155 7.0E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_47070 9d58c1754a3f8f96180cf6033b47fcd9 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 183 7.0E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_47070 9d58c1754a3f8f96180cf6033b47fcd9 201 Pfam PF00072 Response regulator receiver domain 5 116 1.2E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_47070 9d58c1754a3f8f96180cf6033b47fcd9 201 Gene3D G3DSA:3.40.50.12740 2 201 1.5E-55 T 14-10-2018 AMIS_47070 9d58c1754a3f8f96180cf6033b47fcd9 201 Pfam PF00196 Bacterial regulatory proteins, luxR family 140 195 2.5E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_74360 10d11f4f8b6c21bdc19d20852eb19679 373 Pfam PF01494 FAD binding domain 4 155 3.1E-9 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 AMIS_74360 10d11f4f8b6c21bdc19d20852eb19679 373 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 1.3E-15 T 14-10-2018 AMIS_74360 10d11f4f8b6c21bdc19d20852eb19679 373 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 252 267 1.3E-15 T 14-10-2018 AMIS_74360 10d11f4f8b6c21bdc19d20852eb19679 373 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 135 150 1.3E-15 T 14-10-2018 AMIS_74360 10d11f4f8b6c21bdc19d20852eb19679 373 Gene3D G3DSA:3.50.50.60 2 328 1.8E-65 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_74360 10d11f4f8b6c21bdc19d20852eb19679 373 TIGRFAM TIGR02032 GG-red-SF: geranylgeranyl reductase family 4 285 2.0E-55 T 14-10-2018 IPR011777 Geranylgeranyl reductase family GO:0016628|GO:0055114 AMIS_74360 10d11f4f8b6c21bdc19d20852eb19679 373 SUPERFAMILY SSF51905 4 330 1.54E-35 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_50170 86f2927888631979c492809a63b7b832 352 Pfam PF00535 Glycosyl transferase family 2 43 106 3.1E-10 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AMIS_50170 86f2927888631979c492809a63b7b832 352 Gene3D G3DSA:3.90.550.10 1 181 4.4E-21 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_50170 86f2927888631979c492809a63b7b832 352 SUPERFAMILY SSF53448 4 199 8.04E-28 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_50270 b3f4d88aea11157c567c0948d721ed76 289 Gene3D G3DSA:3.20.20.20 12 288 2.8E-89 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMIS_50270 b3f4d88aea11157c567c0948d721ed76 289 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 23 38 - T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMIS_50270 b3f4d88aea11157c567c0948d721ed76 289 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 23 275 8.0E-80 T 14-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 AMIS_50270 b3f4d88aea11157c567c0948d721ed76 289 Pfam PF00809 Pterin binding enzyme 24 260 4.6E-65 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMIS_50270 b3f4d88aea11157c567c0948d721ed76 289 SUPERFAMILY SSF51717 9 280 4.97E-84 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMIS_31290 1dbaeb9305391dd8675ed2d0f255373f 166 SUPERFAMILY SSF51182 4 129 1.24E-24 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily AMIS_31290 1dbaeb9305391dd8675ed2d0f255373f 166 Pfam PF07883 Cupin domain 44 110 3.2E-14 T 14-10-2018 IPR013096 Cupin 2, conserved barrel AMIS_31290 1dbaeb9305391dd8675ed2d0f255373f 166 Gene3D G3DSA:2.60.120.10 2 154 3.0E-38 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMIS_28190 9dd472a8ebdc6855e96c2d0b63218f71 512 Gene3D G3DSA:3.40.50.1980 25 131 2.2E-19 T 14-10-2018 AMIS_28190 9dd472a8ebdc6855e96c2d0b63218f71 512 TIGRFAM TIGR03772 anch_rpt_subst: anchored repeat ABC transporter, substrate-binding protein 34 512 4.9E-220 T 14-10-2018 IPR022434 ABC transporter, LPXTG-anchor lipoprotein, actinobacteria AMIS_28190 9dd472a8ebdc6855e96c2d0b63218f71 512 SUPERFAMILY SSF53807 30 512 1.61E-62 T 14-10-2018 AMIS_28190 9dd472a8ebdc6855e96c2d0b63218f71 512 Gene3D G3DSA:3.40.50.1980 331 393 1.2E-14 T 14-10-2018 AMIS_28190 9dd472a8ebdc6855e96c2d0b63218f71 512 TIGRFAM TIGR03769 P_ac_wall_RPT: actinobacterial surface-anchored protein domain 209 251 1.9E-14 T 14-10-2018 IPR022435 Surface-anchored repeat, actinobacteria AMIS_28190 9dd472a8ebdc6855e96c2d0b63218f71 512 PRINTS PR00690 Adhesin family signature 63 76 4.2E-10 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 AMIS_28190 9dd472a8ebdc6855e96c2d0b63218f71 512 PRINTS PR00690 Adhesin family signature 32 50 4.2E-10 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 AMIS_28190 9dd472a8ebdc6855e96c2d0b63218f71 512 PRINTS PR00690 Adhesin family signature 76 93 4.2E-10 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 AMIS_28190 9dd472a8ebdc6855e96c2d0b63218f71 512 Gene3D G3DSA:3.40.50.1980 394 512 4.9E-28 T 14-10-2018 AMIS_28190 9dd472a8ebdc6855e96c2d0b63218f71 512 Pfam PF01297 Zinc-uptake complex component A periplasmic 35 510 7.2E-74 T 14-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 AMIS_28190 9dd472a8ebdc6855e96c2d0b63218f71 512 PRINTS PR00691 Adhesin B signature 76 95 3.0E-11 T 14-10-2018 IPR006129 Adhesin B GO:0007155 AMIS_28190 9dd472a8ebdc6855e96c2d0b63218f71 512 PRINTS PR00691 Adhesin B signature 32 53 3.0E-11 T 14-10-2018 IPR006129 Adhesin B GO:0007155 AMIS_28190 9dd472a8ebdc6855e96c2d0b63218f71 512 PRINTS PR00691 Adhesin B signature 57 75 3.0E-11 T 14-10-2018 IPR006129 Adhesin B GO:0007155 AMIS_79790 8a41812d3b7512075ea7fb9f5616bc1d 235 SUPERFAMILY SSF48498 89 225 9.78E-22 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_79790 8a41812d3b7512075ea7fb9f5616bc1d 235 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 88 224 5.0E-10 T 14-10-2018 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 AMIS_79790 8a41812d3b7512075ea7fb9f5616bc1d 235 SUPERFAMILY SSF46689 18 76 1.64E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_79790 8a41812d3b7512075ea7fb9f5616bc1d 235 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 67 1.3E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_79790 8a41812d3b7512075ea7fb9f5616bc1d 235 Gene3D G3DSA:1.10.357.10 2 235 8.4E-66 T 14-10-2018 AMIS_11350 d71196b1f9bd7e2567decde37815bea5 1044 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 10 834 3.2E-265 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AMIS_11350 d71196b1f9bd7e2567decde37815bea5 1044 Gene3D G3DSA:3.40.50.620 20 625 1.1E-228 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMIS_11350 d71196b1f9bd7e2567decde37815bea5 1044 SUPERFAMILY SSF47323 655 887 6.35E-48 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMIS_11350 d71196b1f9bd7e2567decde37815bea5 1044 Gene3D G3DSA:1.10.730.10 642 822 2.4E-52 T 14-10-2018 AMIS_11350 d71196b1f9bd7e2567decde37815bea5 1044 Hamap MF_02003 Isoleucine--tRNA ligase [ileS]. 7 1021 13.634 T 14-10-2018 IPR023586 Isoleucine-tRNA ligase, type 2 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AMIS_11350 d71196b1f9bd7e2567decde37815bea5 1044 SUPERFAMILY SSF50677 205 393 5.76E-48 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AMIS_11350 d71196b1f9bd7e2567decde37815bea5 1044 Gene3D G3DSA:3.90.740.10 201 397 1.1E-228 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AMIS_11350 d71196b1f9bd7e2567decde37815bea5 1044 SUPERFAMILY SSF52374 7 645 6.7E-118 T 14-10-2018 AMIS_11350 d71196b1f9bd7e2567decde37815bea5 1044 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 22 629 2.2E-164 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMIS_11350 d71196b1f9bd7e2567decde37815bea5 1044 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 391 406 6.5E-27 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AMIS_11350 d71196b1f9bd7e2567decde37815bea5 1044 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 45 56 6.5E-27 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AMIS_11350 d71196b1f9bd7e2567decde37815bea5 1044 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 229 252 6.5E-27 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AMIS_11350 d71196b1f9bd7e2567decde37815bea5 1044 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 558 567 6.5E-27 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AMIS_11350 d71196b1f9bd7e2567decde37815bea5 1044 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 516 529 6.5E-27 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AMIS_11350 d71196b1f9bd7e2567decde37815bea5 1044 Pfam PF08264 Anticodon-binding domain of tRNA 685 829 3.1E-28 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 AMIS_3040 40617fbd54dcca96a0a21662ed43c6e0 123 Pfam PF06013 Proteins of 100 residues with WXG 23 106 1.3E-13 T 14-10-2018 IPR010310 Type VII secretion system ESAT-6-like AMIS_3040 40617fbd54dcca96a0a21662ed43c6e0 123 TIGRFAM TIGR03930 WXG100_ESAT6: WXG100 family type VII secretion target 23 110 1.5E-14 T 14-10-2018 IPR010310 Type VII secretion system ESAT-6-like AMIS_3040 40617fbd54dcca96a0a21662ed43c6e0 123 Gene3D G3DSA:1.10.287.1060 21 120 1.5E-15 T 14-10-2018 AMIS_3040 40617fbd54dcca96a0a21662ed43c6e0 123 SUPERFAMILY SSF140453 25 112 9.29E-16 T 14-10-2018 IPR036689 ESAT-6-like superfamily AMIS_46290 d3431c89f64589121d547f9ec1ad4d6a 205 SUPERFAMILY SSF54593 3 142 2.95E-18 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_46290 d3431c89f64589121d547f9ec1ad4d6a 205 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 135 2.3E-5 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMIS_46290 d3431c89f64589121d547f9ec1ad4d6a 205 Gene3D G3DSA:3.10.180.10 3 139 1.4E-24 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_11060 6c5c5cbec61b3633d8b2fb96a88c347c 210 Gene3D G3DSA:3.40.30.10 1 210 5.4E-72 T 14-10-2018 AMIS_11060 6c5c5cbec61b3633d8b2fb96a88c347c 210 Pfam PF01323 DSBA-like thioredoxin domain 6 141 6.1E-6 T 14-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 AMIS_11060 6c5c5cbec61b3633d8b2fb96a88c347c 210 SUPERFAMILY SSF52833 5 169 1.95E-20 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMIS_30710 f4f6ddd51abd315e6a84dda42b84bc96 276 Gene3D G3DSA:3.40.50.1820 3 254 1.2E-42 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_30710 f4f6ddd51abd315e6a84dda42b84bc96 276 SUPERFAMILY SSF53474 6 252 1.66E-44 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_30710 f4f6ddd51abd315e6a84dda42b84bc96 276 Pfam PF12697 Alpha/beta hydrolase family 33 245 4.2E-18 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_30710 f4f6ddd51abd315e6a84dda42b84bc96 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 100 113 1.8E-9 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_30710 f4f6ddd51abd315e6a84dda42b84bc96 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 56 71 1.8E-9 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_30710 f4f6ddd51abd315e6a84dda42b84bc96 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 114 127 1.8E-9 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_79800 10b25f1eeedb4f879069cd38fdbbf15c 420 Gene3D G3DSA:2.30.40.10 14 409 1.1E-60 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMIS_79800 10b25f1eeedb4f879069cd38fdbbf15c 420 Gene3D G3DSA:3.20.20.140 55 373 1.1E-60 T 14-10-2018 AMIS_79800 10b25f1eeedb4f879069cd38fdbbf15c 420 Pfam PF01979 Amidohydrolase family 49 409 1.7E-25 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AMIS_79800 10b25f1eeedb4f879069cd38fdbbf15c 420 SUPERFAMILY SSF51556 52 373 2.82E-49 T 14-10-2018 IPR032466 Metal-dependent hydrolase AMIS_79800 10b25f1eeedb4f879069cd38fdbbf15c 420 SUPERFAMILY SSF51338 3 411 1.28E-15 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMIS_17210 7bb8ae56a25e437279efb4a1e602efba 509 Pfam PF00817 impB/mucB/samB family 10 159 1.2E-40 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AMIS_17210 7bb8ae56a25e437279efb4a1e602efba 509 SUPERFAMILY SSF100879 245 344 3.14E-26 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AMIS_17210 7bb8ae56a25e437279efb4a1e602efba 509 Gene3D G3DSA:2.30.40.20 14 74 4.2E-23 T 14-10-2018 AMIS_17210 7bb8ae56a25e437279efb4a1e602efba 509 SUPERFAMILY SSF56672 7 243 8.9E-69 T 14-10-2018 AMIS_17210 7bb8ae56a25e437279efb4a1e602efba 509 Gene3D G3DSA:3.30.1490.100 244 355 1.4E-24 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AMIS_17210 7bb8ae56a25e437279efb4a1e602efba 509 Hamap MF_01113 DNA polymerase IV [dinB]. 4 354 34.228 T 14-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 AMIS_17210 7bb8ae56a25e437279efb4a1e602efba 509 Gene3D G3DSA:1.10.150.20 175 243 8.2E-17 T 14-10-2018 AMIS_17210 7bb8ae56a25e437279efb4a1e602efba 509 Gene3D G3DSA:3.30.70.270 75 171 3.3E-24 T 14-10-2018 AMIS_17210 7bb8ae56a25e437279efb4a1e602efba 509 Pfam PF11799 impB/mucB/samB family C-terminal domain 242 350 1.2E-16 T 14-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AMIS_67650 fa05d4e63f5a4074df81da49555a502b 331 SUPERFAMILY SSF110296 12 302 1.96E-30 T 14-10-2018 AMIS_67650 fa05d4e63f5a4074df81da49555a502b 331 Gene3D G3DSA:2.130.10.10 124 321 1.6E-8 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_67650 fa05d4e63f5a4074df81da49555a502b 331 Gene3D G3DSA:2.130.10.10 11 123 7.0E-9 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_26670 a5035452a25e8e8eeeff2d5a5e90325b 215 SUPERFAMILY SSF81296 120 197 9.92E-7 T 14-10-2018 IPR014756 Immunoglobulin E-set AMIS_26670 a5035452a25e8e8eeeff2d5a5e90325b 215 Pfam PF01833 IPT/TIG domain 118 188 2.9E-7 T 14-10-2018 IPR002909 IPT domain AMIS_26670 a5035452a25e8e8eeeff2d5a5e90325b 215 SMART SM00429 117 198 7.8E-4 T 14-10-2018 IPR002909 IPT domain AMIS_26670 a5035452a25e8e8eeeff2d5a5e90325b 215 Gene3D G3DSA:2.60.40.10 115 198 4.7E-12 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_19060 e13bcaf7807d003a95711b19f944cf84 381 Gene3D G3DSA:3.40.47.10 2 379 2.8E-91 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_19060 e13bcaf7807d003a95711b19f944cf84 381 SUPERFAMILY SSF53901 262 355 5.04E-12 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_19060 e13bcaf7807d003a95711b19f944cf84 381 SUPERFAMILY SSF53901 4 225 1.93E-21 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_19060 e13bcaf7807d003a95711b19f944cf84 381 PIRSF PIRSF000429 2 333 2.4E-15 T 14-10-2018 IPR002155 Thiolase GO:0016747 AMIS_29660 21e0d6ea61c8e4231f99041813d3d7be 250 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 167 0.0048 T 14-10-2018 AMIS_29660 21e0d6ea61c8e4231f99041813d3d7be 250 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 132 160 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMIS_29660 21e0d6ea61c8e4231f99041813d3d7be 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 1.4E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_29660 21e0d6ea61c8e4231f99041813d3d7be 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 1.4E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_29660 21e0d6ea61c8e4231f99041813d3d7be 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 1.4E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_29660 21e0d6ea61c8e4231f99041813d3d7be 250 SUPERFAMILY SSF51735 8 241 2.88E-67 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_29660 21e0d6ea61c8e4231f99041813d3d7be 250 Gene3D G3DSA:3.40.50.720 1 244 5.2E-69 T 14-10-2018 AMIS_29660 21e0d6ea61c8e4231f99041813d3d7be 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 3.4E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_29660 21e0d6ea61c8e4231f99041813d3d7be 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 3.4E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_29660 21e0d6ea61c8e4231f99041813d3d7be 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 3.4E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_29660 21e0d6ea61c8e4231f99041813d3d7be 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.4E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_29660 21e0d6ea61c8e4231f99041813d3d7be 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 3.4E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_29660 21e0d6ea61c8e4231f99041813d3d7be 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 3.4E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_29660 21e0d6ea61c8e4231f99041813d3d7be 250 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 241 7.4E-53 T 14-10-2018 AMIS_77510 2eebc28198134f3317810ed567f2ddd0 158 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 4 156 29.971 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AMIS_77510 2eebc28198134f3317810ed567f2ddd0 158 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 5 155 3.1E-44 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AMIS_77510 2eebc28198134f3317810ed567f2ddd0 158 Gene3D G3DSA:3.30.1330.50 1 158 1.0E-56 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AMIS_77510 2eebc28198134f3317810ed567f2ddd0 158 SUPERFAMILY SSF69765 3 156 6.28E-50 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AMIS_77510 2eebc28198134f3317810ed567f2ddd0 158 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 38 53 - T 14-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AMIS_77510 2eebc28198134f3317810ed567f2ddd0 158 Pfam PF02542 YgbB family 5 154 4.5E-45 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AMIS_31400 a3d5bc5bb27139e91be1865e361cad2f 424 SUPERFAMILY SSF56601 55 370 9.86E-69 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMIS_31400 a3d5bc5bb27139e91be1865e361cad2f 424 Pfam PF00144 Beta-lactamase 87 371 1.3E-50 T 14-10-2018 IPR001466 Beta-lactamase-related AMIS_31400 a3d5bc5bb27139e91be1865e361cad2f 424 Gene3D G3DSA:3.40.710.10 51 387 7.6E-95 T 14-10-2018 AMIS_16150 5b6885b16b51b732b23a129e066810b5 196 Gene3D G3DSA:3.40.630.30 1 196 4.9E-64 T 14-10-2018 AMIS_16150 5b6885b16b51b732b23a129e066810b5 196 SUPERFAMILY SSF55729 2 183 1.32E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_16150 5b6885b16b51b732b23a129e066810b5 196 Pfam PF00583 Acetyltransferase (GNAT) family 54 177 4.0E-9 T 14-10-2018 IPR000182 GNAT domain AMIS_65190 ef1f3b437d8a30a82422b23b313529f0 273 SMART SM00530 9 81 1.7E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMIS_65190 ef1f3b437d8a30a82422b23b313529f0 273 Pfam PF13560 Helix-turn-helix domain 5 84 2.9E-16 T 14-10-2018 AMIS_65190 ef1f3b437d8a30a82422b23b313529f0 273 Gene3D G3DSA:1.10.260.40 3 85 1.2E-6 T 14-10-2018 AMIS_65190 ef1f3b437d8a30a82422b23b313529f0 273 SUPERFAMILY SSF47413 29 77 1.39E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_17590 b886fd0ec86f0122460047d9d046b094 750 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 17 748 8.7E-278 T 14-10-2018 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 AMIS_17590 b886fd0ec86f0122460047d9d046b094 750 Pfam PF00384 Molybdopterin oxidoreductase 114 407 3.8E-29 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_17590 b886fd0ec86f0122460047d9d046b094 750 SUPERFAMILY SSF53706 51 626 9.29E-142 T 14-10-2018 AMIS_17590 b886fd0ec86f0122460047d9d046b094 750 SUPERFAMILY SSF50692 632 749 1.04E-15 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily AMIS_17590 b886fd0ec86f0122460047d9d046b094 750 PIRSF PIRSF000144 1 750 0.0 T 14-10-2018 AMIS_17590 b886fd0ec86f0122460047d9d046b094 750 Pfam PF01568 Molydopterin dinucleotide binding domain 636 723 1.7E-8 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 AMIS_17590 b886fd0ec86f0122460047d9d046b094 750 Gene3D G3DSA:3.40.50.740 119 599 1.2E-73 T 14-10-2018 AMIS_17590 b886fd0ec86f0122460047d9d046b094 750 Gene3D G3DSA:3.40.228.10 190 406 1.2E-73 T 14-10-2018 AMIS_40270 da4779caf062af740cc74639577f0222 539 SUPERFAMILY SSF56645 58 278 1.41E-38 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMIS_40270 da4779caf062af740cc74639577f0222 539 Gene3D G3DSA:1.20.140.10 280 434 9.1E-31 T 14-10-2018 AMIS_40270 da4779caf062af740cc74639577f0222 539 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 178 190 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AMIS_40270 da4779caf062af740cc74639577f0222 539 Gene3D G3DSA:2.40.110.20 126 279 7.1E-59 T 14-10-2018 AMIS_40270 da4779caf062af740cc74639577f0222 539 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 176 270 8.8E-18 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMIS_40270 da4779caf062af740cc74639577f0222 539 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 280 433 2.5E-24 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMIS_40270 da4779caf062af740cc74639577f0222 539 SUPERFAMILY SSF47203 285 437 5.15E-35 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMIS_13350 b61ffe08c9f13cc1274579445851bba9 203 Gene3D G3DSA:3.30.1380.10 50 203 3.6E-20 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AMIS_13350 b61ffe08c9f13cc1274579445851bba9 203 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 98 200 2.7E-14 T 14-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 AMIS_13350 b61ffe08c9f13cc1274579445851bba9 203 SUPERFAMILY SSF55166 95 201 5.49E-23 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AMIS_61380 cc36e6aae125a418fb0619d55ca57e09 803 SUPERFAMILY SSF141868 549 798 2.35E-88 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_61380 cc36e6aae125a418fb0619d55ca57e09 803 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 369 532 2.0E-41 T 14-10-2018 IPR000160 GGDEF domain AMIS_61380 cc36e6aae125a418fb0619d55ca57e09 803 Pfam PF00990 Diguanylate cyclase, GGDEF domain 373 529 2.2E-44 T 14-10-2018 IPR000160 GGDEF domain AMIS_61380 cc36e6aae125a418fb0619d55ca57e09 803 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 265 366 4.0E-6 T 14-10-2018 IPR000014 PAS domain AMIS_61380 cc36e6aae125a418fb0619d55ca57e09 803 SUPERFAMILY SSF158472 204 252 4.32E-11 T 14-10-2018 AMIS_61380 cc36e6aae125a418fb0619d55ca57e09 803 Gene3D G3DSA:3.30.450.20 260 371 2.9E-14 T 14-10-2018 AMIS_61380 cc36e6aae125a418fb0619d55ca57e09 803 SMART SM00304 203 255 8.2E-17 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_61380 cc36e6aae125a418fb0619d55ca57e09 803 Gene3D G3DSA:1.20.1480.50 169 259 9.8E-14 T 14-10-2018 AMIS_61380 cc36e6aae125a418fb0619d55ca57e09 803 Gene3D G3DSA:3.20.20.450 547 802 1.4E-100 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_61380 cc36e6aae125a418fb0619d55ca57e09 803 SUPERFAMILY SSF55785 272 370 8.55E-14 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_61380 cc36e6aae125a418fb0619d55ca57e09 803 Pfam PF13426 PAS domain 272 360 5.7E-7 T 14-10-2018 IPR000014 PAS domain AMIS_61380 cc36e6aae125a418fb0619d55ca57e09 803 Gene3D G3DSA:3.30.70.270 372 546 3.3E-58 T 14-10-2018 AMIS_61380 cc36e6aae125a418fb0619d55ca57e09 803 Pfam PF00563 EAL domain 549 786 9.3E-78 T 14-10-2018 IPR001633 EAL domain AMIS_61380 cc36e6aae125a418fb0619d55ca57e09 803 Pfam PF00672 HAMP domain 204 252 1.5E-14 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_61380 cc36e6aae125a418fb0619d55ca57e09 803 SMART SM00052 543 791 1.4E-111 T 14-10-2018 IPR001633 EAL domain AMIS_61380 cc36e6aae125a418fb0619d55ca57e09 803 SMART SM00267 362 533 1.6E-56 T 14-10-2018 IPR000160 GGDEF domain AMIS_61380 cc36e6aae125a418fb0619d55ca57e09 803 SUPERFAMILY SSF55073 378 534 7.85E-48 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_1990 fc86603515a470ac440ed9e3ee7e78ff 149 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AMIS_1990 fc86603515a470ac440ed9e3ee7e78ff 149 SMART SM00344 1 108 2.3E-39 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AMIS_1990 fc86603515a470ac440ed9e3ee7e78ff 149 SUPERFAMILY SSF54909 61 145 2.82E-16 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel AMIS_1990 fc86603515a470ac440ed9e3ee7e78ff 149 Gene3D G3DSA:1.10.10.10 2 51 3.3E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_1990 fc86603515a470ac440ed9e3ee7e78ff 149 SUPERFAMILY SSF46785 1 60 2.34E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_1990 fc86603515a470ac440ed9e3ee7e78ff 149 Pfam PF13404 AsnC-type helix-turn-helix domain 1 42 1.5E-17 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMIS_1990 fc86603515a470ac440ed9e3ee7e78ff 149 Pfam PF01037 Lrp/AsnC ligand binding domain 75 138 9.2E-17 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMIS_1990 fc86603515a470ac440ed9e3ee7e78ff 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 4.3E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMIS_1990 fc86603515a470ac440ed9e3ee7e78ff 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 4.3E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMIS_1990 fc86603515a470ac440ed9e3ee7e78ff 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 4.3E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMIS_1990 fc86603515a470ac440ed9e3ee7e78ff 149 Gene3D G3DSA:3.30.70.920 52 143 1.4E-19 T 14-10-2018 AMIS_44770 db0811e61bfb66977b7b15ea891e1fe7 246 SUPERFAMILY SSF53474 2 244 1.01E-51 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_44770 db0811e61bfb66977b7b15ea891e1fe7 246 Gene3D G3DSA:3.40.50.1820 1 244 6.4E-50 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_44770 db0811e61bfb66977b7b15ea891e1fe7 246 Pfam PF12697 Alpha/beta hydrolase family 19 233 7.4E-16 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_18170 012e94ea71e8b6d4a01fe4d85321de3b 811 SUPERFAMILY SSF46894 736 811 2.35E-18 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_18170 012e94ea71e8b6d4a01fe4d85321de3b 811 Gene3D G3DSA:1.25.40.10 418 753 7.8E-26 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_18170 012e94ea71e8b6d4a01fe4d85321de3b 811 Gene3D G3DSA:1.10.10.10 754 811 1.2E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_18170 012e94ea71e8b6d4a01fe4d85321de3b 811 SMART SM00421 748 805 7.2E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_18170 012e94ea71e8b6d4a01fe4d85321de3b 811 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 751 765 1.2E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_18170 012e94ea71e8b6d4a01fe4d85321de3b 811 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 765 781 1.2E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_18170 012e94ea71e8b6d4a01fe4d85321de3b 811 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 781 793 1.2E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_18170 012e94ea71e8b6d4a01fe4d85321de3b 811 Pfam PF00196 Bacterial regulatory proteins, luxR family 750 804 1.1E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_13850 c9c2abfa0edfcc5649a5df2b0ce58bf8 215 SUPERFAMILY SSF55681 12 212 3.89E-65 T 14-10-2018 AMIS_13850 c9c2abfa0edfcc5649a5df2b0ce58bf8 215 Pfam PF03099 Biotin/lipoate A/B protein ligase family 70 170 7.9E-8 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 AMIS_13850 c9c2abfa0edfcc5649a5df2b0ce58bf8 215 Gene3D G3DSA:3.30.930.10 6 214 9.3E-76 T 14-10-2018 AMIS_13850 c9c2abfa0edfcc5649a5df2b0ce58bf8 215 PIRSF PIRSF016262 7 215 8.9E-58 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AMIS_13850 c9c2abfa0edfcc5649a5df2b0ce58bf8 215 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 38 205 5.4E-38 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AMIS_13850 c9c2abfa0edfcc5649a5df2b0ce58bf8 215 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 81 133 2.0E-17 T 14-10-2018 AMIS_13850 c9c2abfa0edfcc5649a5df2b0ce58bf8 215 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 77 92 - T 14-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 AMIS_13850 c9c2abfa0edfcc5649a5df2b0ce58bf8 215 Hamap MF_00013 Octanoyltransferase [lipB]. 11 214 31.528 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AMIS_42570 7eb0195755d951acd71e4c339db8c204 455 Gene3D G3DSA:3.30.70.360 201 373 9.0E-123 T 14-10-2018 AMIS_42570 7eb0195755d951acd71e4c339db8c204 455 Gene3D G3DSA:3.40.630.10 18 445 9.0E-123 T 14-10-2018 AMIS_42570 7eb0195755d951acd71e4c339db8c204 455 SUPERFAMILY SSF53187 4 452 2.6E-56 T 14-10-2018 AMIS_42570 7eb0195755d951acd71e4c339db8c204 455 Pfam PF07687 Peptidase dimerisation domain 195 348 1.2E-14 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain AMIS_42570 7eb0195755d951acd71e4c339db8c204 455 Pfam PF01546 Peptidase family M20/M25/M40 83 450 3.3E-31 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 AMIS_80170 6fe31264a38710f1f5e603db38ac7473 353 Gene3D G3DSA:1.20.1090.10 160 350 3.3E-44 T 14-10-2018 AMIS_80170 6fe31264a38710f1f5e603db38ac7473 353 PIRSF PIRSF000112 1 352 6.1E-75 T 14-10-2018 IPR016205 Glycerol dehydrogenase GO:0016614|GO:0046872|GO:0055114 KEGG: 00564+1.1.1.261|MetaCyc: PWY-6349 AMIS_80170 6fe31264a38710f1f5e603db38ac7473 353 Pfam PF13685 Iron-containing alcohol dehydrogenase 16 267 3.7E-55 T 14-10-2018 IPR032837 Glycerol-1-phosphate dehydrogenase KEGG: 00564+1.1.1.261|MetaCyc: PWY-6349 AMIS_80170 6fe31264a38710f1f5e603db38ac7473 353 Gene3D G3DSA:3.40.50.1970 4 157 2.8E-26 T 14-10-2018 AMIS_80170 6fe31264a38710f1f5e603db38ac7473 353 SUPERFAMILY SSF56796 8 346 4.45E-53 T 14-10-2018 AMIS_14210 23421f4e2cf6ea5312c85d3b9c746268 203 Pfam PF00510 Cytochrome c oxidase subunit III 21 201 7.2E-23 T 14-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_14210 23421f4e2cf6ea5312c85d3b9c746268 203 SUPERFAMILY SSF81452 15 202 4.32E-56 T 14-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_14210 23421f4e2cf6ea5312c85d3b9c746268 203 Gene3D G3DSA:1.20.120.80 21 203 1.3E-55 T 14-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_39630 9774b4bb4185f675ee464c428b8c8766 238 Gene3D G3DSA:3.40.50.300 1 225 8.4E-55 T 14-10-2018 AMIS_39630 9774b4bb4185f675ee464c428b8c8766 238 Pfam PF00005 ABC transporter 23 151 6.4E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_39630 9774b4bb4185f675ee464c428b8c8766 238 SMART SM00382 32 201 1.6E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_39630 9774b4bb4185f675ee464c428b8c8766 238 ProSitePatterns PS00211 ABC transporters family signature. 124 138 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_39630 9774b4bb4185f675ee464c428b8c8766 238 SUPERFAMILY SSF52540 7 205 1.39E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_78070 7e5a11078f832df4ee6e6689843c7503 346 Gene3D G3DSA:1.20.150.30 4 130 8.2E-32 T 14-10-2018 AMIS_78070 7e5a11078f832df4ee6e6689843c7503 346 TIGRFAM TIGR03883 DUF2342_F420: uncharacterized protein, coenzyme F420 biosynthesis associated 5 345 3.6E-129 T 14-10-2018 IPR022454 Conserved hypothetical protein CHP03883, F420 biosynthesis associated AMIS_78070 7e5a11078f832df4ee6e6689843c7503 346 SUPERFAMILY SSF55486 4 344 4.1E-98 T 14-10-2018 AMIS_78070 7e5a11078f832df4ee6e6689843c7503 346 TIGRFAM TIGR03624 TIGR03624: putative hydrolase 5 345 3.5E-101 T 14-10-2018 IPR018766 Zinicin-like metallopeptidase type 2 AMIS_78070 7e5a11078f832df4ee6e6689843c7503 346 Pfam PF10103 Zincin-like metallopeptidase 5 341 1.4E-109 T 14-10-2018 IPR018766 Zinicin-like metallopeptidase type 2 AMIS_67360 7b54bbb8c224771240194a2a8208e913 211 Gene3D G3DSA:3.40.630.30 45 185 5.7E-13 T 14-10-2018 AMIS_67360 7b54bbb8c224771240194a2a8208e913 211 SUPERFAMILY SSF55729 60 180 7.89E-15 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_67360 7b54bbb8c224771240194a2a8208e913 211 Pfam PF00583 Acetyltransferase (GNAT) family 54 138 9.2E-6 T 14-10-2018 IPR000182 GNAT domain AMIS_48020 8f0ad1681e4cfee535674cfae083b9f7 276 Gene3D G3DSA:3.40.50.720 10 263 2.7E-69 T 14-10-2018 AMIS_48020 8f0ad1681e4cfee535674cfae083b9f7 276 SUPERFAMILY SSF51735 8 244 1.89E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_48020 8f0ad1681e4cfee535674cfae083b9f7 276 Gene3D G3DSA:3.90.25.10 141 264 2.7E-69 T 14-10-2018 AMIS_48020 8f0ad1681e4cfee535674cfae083b9f7 276 Pfam PF05368 NmrA-like family 9 214 2.1E-20 T 14-10-2018 IPR008030 NmrA-like domain Reactome: R-HSA-70635 AMIS_2120 01552c95f5e12d72b39ccc7285d7cc30 254 SUPERFAMILY SSF54593 12 168 1.31E-22 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_2120 01552c95f5e12d72b39ccc7285d7cc30 254 Gene3D G3DSA:3.10.180.10 133 254 1.7E-34 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_2120 01552c95f5e12d72b39ccc7285d7cc30 254 Gene3D G3DSA:3.10.180.10 7 127 3.1E-33 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_2120 01552c95f5e12d72b39ccc7285d7cc30 254 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 15 119 1.1E-4 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMIS_2120 01552c95f5e12d72b39ccc7285d7cc30 254 SUPERFAMILY SSF54593 139 251 4.7E-18 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_8610 2669252d7582f8fc4dd61b093a13f0de 124 PIRSF PIRSF009151 1 124 4.5E-57 T 14-10-2018 IPR008497 Protein of unknown function DUF779 AMIS_8610 2669252d7582f8fc4dd61b093a13f0de 124 Pfam PF05610 Protein of unknown function (DUF779) 14 113 2.2E-46 T 14-10-2018 IPR008497 Protein of unknown function DUF779 AMIS_79070 811bee1e615545682416a9c4f1a35e55 189 Gene3D G3DSA:3.40.630.30 5 189 6.1E-47 T 14-10-2018 AMIS_79070 811bee1e615545682416a9c4f1a35e55 189 Pfam PF13302 Acetyltransferase (GNAT) domain 18 160 1.4E-31 T 14-10-2018 IPR000182 GNAT domain AMIS_79070 811bee1e615545682416a9c4f1a35e55 189 SUPERFAMILY SSF55729 12 184 1.63E-43 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_31140 6ca4d6c796e0b0c1d71ae3219ea5229a 386 Pfam PF10442 FIST C domain 226 367 8.0E-22 T 14-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 AMIS_31140 6ca4d6c796e0b0c1d71ae3219ea5229a 386 SMART SM00897 27 225 2.6E-39 T 14-10-2018 IPR013702 FIST domain, N-terminal AMIS_31140 6ca4d6c796e0b0c1d71ae3219ea5229a 386 Pfam PF08495 FIST N domain 30 223 1.9E-34 T 14-10-2018 IPR013702 FIST domain, N-terminal AMIS_31140 6ca4d6c796e0b0c1d71ae3219ea5229a 386 SMART SM01204 226 369 7.8E-20 T 14-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 AMIS_80700 87be837b2f657bb57ebf892ae325b6ab 403 Gene3D G3DSA:3.60.21.10 183 368 2.4E-18 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like AMIS_80700 87be837b2f657bb57ebf892ae325b6ab 403 Pfam PF00149 Calcineurin-like phosphoesterase 184 344 5.1E-14 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AMIS_80700 87be837b2f657bb57ebf892ae325b6ab 403 SUPERFAMILY SSF56300 184 401 4.06E-39 T 14-10-2018 AMIS_49720 7a1de59b27094a9bf5798ce5c5d49de9 502 SUPERFAMILY SSF52777 59 225 1.78E-33 T 14-10-2018 AMIS_49720 7a1de59b27094a9bf5798ce5c5d49de9 502 SUPERFAMILY SSF52777 231 470 1.67E-33 T 14-10-2018 AMIS_49720 7a1de59b27094a9bf5798ce5c5d49de9 502 Gene3D G3DSA:3.30.559.30 229 468 5.1E-81 T 14-10-2018 AMIS_49720 7a1de59b27094a9bf5798ce5c5d49de9 502 Gene3D G3DSA:3.30.559.10 59 413 5.1E-81 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AMIS_49720 7a1de59b27094a9bf5798ce5c5d49de9 502 Pfam PF00668 Condensation domain 58 374 2.4E-40 T 14-10-2018 IPR001242 Condensation domain AMIS_11260 9cbe9a9ebbe0362ee9882808091a7ad8 264 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 147 167 - T 14-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site AMIS_11260 9cbe9a9ebbe0362ee9882808091a7ad8 264 Gene3D G3DSA:3.60.110.10 1 264 3.2E-96 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AMIS_11260 9cbe9a9ebbe0362ee9882808091a7ad8 264 SUPERFAMILY SSF56317 1 262 1.07E-84 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AMIS_11260 9cbe9a9ebbe0362ee9882808091a7ad8 264 Pfam PF00795 Carbon-nitrogen hydrolase 2 253 1.1E-60 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 AMIS_15030 c0746255723e630c803b5aa6fd383953 118 ProDom PD004028 INHIBITOR PROTEASE SERINE DIRECT SEQUENCING SUBTILISIN PRECURSOR SIGNAL INHIBITOR-LIKE INHIBITOR 30 108 3.0E-12 T 14-10-2018 IPR023549 Subtilisin inhibitor GO:0004867 AMIS_15030 c0746255723e630c803b5aa6fd383953 118 PRINTS PR00294 Streptomyces subtilisin inhibitor signature 93 109 1.1E-9 T 14-10-2018 IPR000691 Proteinase inhibitor I16, Streptomyces subtilisin-type inhibitor GO:0004867 AMIS_15030 c0746255723e630c803b5aa6fd383953 118 PRINTS PR00294 Streptomyces subtilisin inhibitor signature 42 69 1.1E-9 T 14-10-2018 IPR000691 Proteinase inhibitor I16, Streptomyces subtilisin-type inhibitor GO:0004867 AMIS_15030 c0746255723e630c803b5aa6fd383953 118 Gene3D G3DSA:3.30.350.10 23 118 1.6E-29 T 14-10-2018 IPR036819 Subtilisin inhibitor-like superfamily GO:0004867 AMIS_15030 c0746255723e630c803b5aa6fd383953 118 ProSitePatterns PS00999 Streptomyces subtilisin-type inhibitors signature. 42 59 - T 14-10-2018 IPR020054 Proteinase inhibitor I16, Streptomyces subtilisin-type inhibitor, conserved site GO:0004867 AMIS_15030 c0746255723e630c803b5aa6fd383953 118 Pfam PF00720 Subtilisin inhibitor-like 31 104 5.0E-22 T 14-10-2018 IPR023549 Subtilisin inhibitor GO:0004867 AMIS_15030 c0746255723e630c803b5aa6fd383953 118 SUPERFAMILY SSF55399 30 118 1.83E-26 T 14-10-2018 IPR036819 Subtilisin inhibitor-like superfamily GO:0004867 AMIS_31900 97c7fc76f188ee9b04b6cdc09c0b4a1d 218 Pfam PF00072 Response regulator receiver domain 3 112 2.2E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_31900 97c7fc76f188ee9b04b6cdc09c0b4a1d 218 Gene3D G3DSA:1.10.10.10 125 218 8.8E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_31900 97c7fc76f188ee9b04b6cdc09c0b4a1d 218 Gene3D G3DSA:3.40.50.2300 1 124 4.6E-30 T 14-10-2018 AMIS_31900 97c7fc76f188ee9b04b6cdc09c0b4a1d 218 SMART SM00448 1 112 1.1E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_31900 97c7fc76f188ee9b04b6cdc09c0b4a1d 218 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 217 7.7E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_31900 97c7fc76f188ee9b04b6cdc09c0b4a1d 218 SUPERFAMILY SSF52172 1 172 1.9E-34 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_31900 97c7fc76f188ee9b04b6cdc09c0b4a1d 218 SMART SM00862 145 217 4.7E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_58170 1d903f809a769e9e3ead756e6ea5c0f8 342 Gene3D G3DSA:3.40.630.30 140 305 4.7E-15 T 14-10-2018 AMIS_58170 1d903f809a769e9e3ead756e6ea5c0f8 342 SUPERFAMILY SSF55729 148 322 1.32E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_74800 efc5ff894f5787cfe5de4af41c750004 226 Pfam PF14094 Domain of unknown function (DUF4272) 13 213 8.0E-43 T 14-10-2018 IPR025368 Protein of unknown function DUF4272 AMIS_79150 3ef5452fcf3341976081c35becab9705 382 SUPERFAMILY SSF51569 54 328 7.01E-15 T 14-10-2018 AMIS_79150 3ef5452fcf3341976081c35becab9705 382 Pfam PF06187 Protein of unknown function (DUF993) 12 379 9.2E-178 T 14-10-2018 IPR009334 Protein of unknown function DUF993 AMIS_79150 3ef5452fcf3341976081c35becab9705 382 Gene3D G3DSA:3.20.20.500 4 376 1.3E-169 T 14-10-2018 AMIS_69910 5f329b963446691c2bfea6e22d54235f 362 Gene3D G3DSA:3.30.450.40 13 165 1.7E-14 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_69910 5f329b963446691c2bfea6e22d54235f 362 SMART SM01012 185 240 0.0029 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 AMIS_69910 5f329b963446691c2bfea6e22d54235f 362 Pfam PF03861 ANTAR domain 192 240 4.2E-7 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 AMIS_69910 5f329b963446691c2bfea6e22d54235f 362 Pfam PF13185 GAF domain 63 155 7.1E-11 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_69910 5f329b963446691c2bfea6e22d54235f 362 SUPERFAMILY SSF52091 257 350 1.1E-13 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_69910 5f329b963446691c2bfea6e22d54235f 362 Gene3D G3DSA:3.30.750.24 248 358 1.3E-15 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_69910 5f329b963446691c2bfea6e22d54235f 362 Pfam PF13466 STAS domain 266 342 5.5E-8 T 14-10-2018 IPR002645 STAS domain AMIS_69910 5f329b963446691c2bfea6e22d54235f 362 SUPERFAMILY SSF55781 49 156 8.72E-15 T 14-10-2018 AMIS_52140 250236952960419707a98a1bd5a383f5 312 SUPERFAMILY SSF64182 6 305 1.96E-8 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily AMIS_52140 250236952960419707a98a1bd5a383f5 312 PIRSF PIRSF028235 1 308 1.6E-136 T 14-10-2018 IPR016877 Uncharacterised conserved protein UCP028235 AMIS_57110 c0686d28e1143b184c3bf7803810a812 399 Gene3D G3DSA:3.40.50.10540 3 388 6.6E-116 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily AMIS_57110 c0686d28e1143b184c3bf7803810a812 399 SUPERFAMILY SSF89796 1 393 1.44E-119 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily AMIS_57110 c0686d28e1143b184c3bf7803810a812 399 Gene3D G3DSA:3.30.1540.10 229 323 6.6E-116 T 14-10-2018 AMIS_57110 c0686d28e1143b184c3bf7803810a812 399 Pfam PF02515 CoA-transferase family III 4 370 6.7E-119 T 14-10-2018 IPR003673 CoA-transferase family III GO:0003824 AMIS_65920 4f87ecd714a5e72e9e2276ccf08397b9 582 Pfam PF00128 Alpha amylase, catalytic domain 50 397 1.4E-75 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMIS_65920 4f87ecd714a5e72e9e2276ccf08397b9 582 Gene3D G3DSA:3.90.400.10 125 192 2.3E-132 T 14-10-2018 AMIS_65920 4f87ecd714a5e72e9e2276ccf08397b9 582 SUPERFAMILY SSF51445 25 434 1.61E-106 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_65920 4f87ecd714a5e72e9e2276ccf08397b9 582 Pfam PF11941 Domain of unknown function (DUF3459) 503 580 2.0E-6 T 14-10-2018 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) AMIS_65920 4f87ecd714a5e72e9e2276ccf08397b9 582 Gene3D G3DSA:3.20.20.80 472 519 1.9E-8 T 14-10-2018 AMIS_65920 4f87ecd714a5e72e9e2276ccf08397b9 582 SMART SM00642 35 423 1.3E-107 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMIS_65920 4f87ecd714a5e72e9e2276ccf08397b9 582 SUPERFAMILY SSF51445 473 517 6.32E-5 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_65920 4f87ecd714a5e72e9e2276ccf08397b9 582 Gene3D G3DSA:3.20.20.80 27 442 2.3E-132 T 14-10-2018 AMIS_43740 87fcb8de831c2203636b4d2743eb18f8 324 Pfam PF13602 Zinc-binding dehydrogenase 188 321 1.7E-21 T 14-10-2018 AMIS_43740 87fcb8de831c2203636b4d2743eb18f8 324 Gene3D G3DSA:3.40.50.720 130 272 9.8E-80 T 14-10-2018 AMIS_43740 87fcb8de831c2203636b4d2743eb18f8 324 SUPERFAMILY SSF51735 119 298 2.74E-28 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_43740 87fcb8de831c2203636b4d2743eb18f8 324 Gene3D G3DSA:3.90.180.10 8 320 9.8E-80 T 14-10-2018 AMIS_43740 87fcb8de831c2203636b4d2743eb18f8 324 SUPERFAMILY SSF50129 1 159 3.04E-28 T 14-10-2018 IPR011032 GroES-like superfamily AMIS_43740 87fcb8de831c2203636b4d2743eb18f8 324 SMART SM00829 10 321 5.2E-12 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMIS_65650 4bb41838dec7c301bf8c500d24ea9399 138 Gene3D G3DSA:3.90.50.10 15 135 4.2E-7 T 14-10-2018 IPR014747 Bacterial photosynthetic reaction centre, H-chain, C-terminal GO:0019684|GO:0030077|GO:0045156 AMIS_65650 4bb41838dec7c301bf8c500d24ea9399 138 SUPERFAMILY SSF50346 37 133 8.04E-23 T 14-10-2018 IPR011033 PRC-barrel-like superfamily AMIS_18480 ba8402e2912a5d8be7a7a92d854dd6fb 209 Gene3D G3DSA:2.60.40.1220 41 140 4.8E-27 T 14-10-2018 AMIS_18480 ba8402e2912a5d8be7a7a92d854dd6fb 209 Pfam PF04234 CopC domain 41 134 8.8E-23 T 14-10-2018 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 AMIS_18480 ba8402e2912a5d8be7a7a92d854dd6fb 209 SUPERFAMILY SSF81296 40 134 9.1E-22 T 14-10-2018 IPR014756 Immunoglobulin E-set AMIS_77360 eec3d0e4428c59d0f290791ceb3c12ee 465 PRINTS PR00145 Argininosuccinate lyase family signature 131 153 1.6E-6 T 14-10-2018 AMIS_77360 eec3d0e4428c59d0f290791ceb3c12ee 465 PRINTS PR00145 Argininosuccinate lyase family signature 173 193 1.6E-6 T 14-10-2018 AMIS_77360 eec3d0e4428c59d0f290791ceb3c12ee 465 PRINTS PR00145 Argininosuccinate lyase family signature 315 331 1.6E-6 T 14-10-2018 AMIS_77360 eec3d0e4428c59d0f290791ceb3c12ee 465 Hamap MF_00743 Fumarate hydratase class II [fumC]. 8 465 80.08 T 14-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AMIS_77360 eec3d0e4428c59d0f290791ceb3c12ee 465 PRINTS PR00149 Fumarate lyase superfamily signature 132 150 9.7E-33 T 14-10-2018 IPR000362 Fumarate lyase family AMIS_77360 eec3d0e4428c59d0f290791ceb3c12ee 465 PRINTS PR00149 Fumarate lyase superfamily signature 269 296 9.7E-33 T 14-10-2018 IPR000362 Fumarate lyase family AMIS_77360 eec3d0e4428c59d0f290791ceb3c12ee 465 PRINTS PR00149 Fumarate lyase superfamily signature 178 196 9.7E-33 T 14-10-2018 IPR000362 Fumarate lyase family AMIS_77360 eec3d0e4428c59d0f290791ceb3c12ee 465 PRINTS PR00149 Fumarate lyase superfamily signature 315 331 9.7E-33 T 14-10-2018 IPR000362 Fumarate lyase family AMIS_77360 eec3d0e4428c59d0f290791ceb3c12ee 465 Pfam PF10415 Fumarase C C-terminus 406 464 3.0E-22 T 14-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AMIS_77360 eec3d0e4428c59d0f290791ceb3c12ee 465 Gene3D G3DSA:1.20.200.10 137 405 6.9E-111 T 14-10-2018 AMIS_77360 eec3d0e4428c59d0f290791ceb3c12ee 465 Gene3D G3DSA:1.10.40.30 406 462 4.4E-24 T 14-10-2018 AMIS_77360 eec3d0e4428c59d0f290791ceb3c12ee 465 ProSitePatterns PS00163 Fumarate lyases signature. 315 324 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AMIS_77360 eec3d0e4428c59d0f290791ceb3c12ee 465 SUPERFAMILY SSF48557 8 463 4.24E-146 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 AMIS_77360 eec3d0e4428c59d0f290791ceb3c12ee 465 Pfam PF00206 Lyase 16 340 1.9E-100 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal AMIS_77360 eec3d0e4428c59d0f290791ceb3c12ee 465 Gene3D G3DSA:1.10.275.10 9 136 6.1E-51 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal AMIS_51740 4a63cf63552035d18cb88db2675b624e 221 Pfam PF00072 Response regulator receiver domain 3 112 8.0E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_51740 4a63cf63552035d18cb88db2675b624e 221 SMART SM00448 1 112 1.2E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_51740 4a63cf63552035d18cb88db2675b624e 221 SMART SM00862 145 217 1.7E-18 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_51740 4a63cf63552035d18cb88db2675b624e 221 Gene3D G3DSA:3.40.50.2300 1 121 6.7E-31 T 14-10-2018 AMIS_51740 4a63cf63552035d18cb88db2675b624e 221 SUPERFAMILY SSF52172 1 170 3.84E-35 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_51740 4a63cf63552035d18cb88db2675b624e 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 217 1.3E-18 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_51740 4a63cf63552035d18cb88db2675b624e 221 Gene3D G3DSA:1.10.10.10 122 221 2.0E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_27340 6266f467629bc67a11b598d193246cd9 257 Gene3D G3DSA:3.40.50.720 1 256 3.5E-74 T 14-10-2018 AMIS_27340 6266f467629bc67a11b598d193246cd9 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 8.6E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_27340 6266f467629bc67a11b598d193246cd9 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 8.6E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_27340 6266f467629bc67a11b598d193246cd9 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 8.6E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_27340 6266f467629bc67a11b598d193246cd9 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 8.6E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_27340 6266f467629bc67a11b598d193246cd9 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 8.6E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_27340 6266f467629bc67a11b598d193246cd9 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 8.6E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_27340 6266f467629bc67a11b598d193246cd9 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 255 4.6E-62 T 14-10-2018 AMIS_27340 6266f467629bc67a11b598d193246cd9 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 3.5E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_27340 6266f467629bc67a11b598d193246cd9 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 3.5E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_27340 6266f467629bc67a11b598d193246cd9 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 3.5E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_27340 6266f467629bc67a11b598d193246cd9 257 SUPERFAMILY SSF51735 6 255 9.85E-72 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_3790 bf13dfb092550053b5aa4d0f186987b3 645 Pfam PF07690 Major Facilitator Superfamily 65 410 9.2E-12 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_3790 bf13dfb092550053b5aa4d0f186987b3 645 Gene3D G3DSA:1.20.1250.20 61 444 1.4E-15 T 14-10-2018 AMIS_3790 bf13dfb092550053b5aa4d0f186987b3 645 SUPERFAMILY SSF103473 71 448 1.83E-17 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_43880 9ddd7af9ec6eb609d69f1e22e3c9e897 152 Gene3D G3DSA:1.10.10.10 7 142 4.1E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_43880 9ddd7af9ec6eb609d69f1e22e3c9e897 152 Pfam PF12802 MarR family 43 85 4.9E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_43880 9ddd7af9ec6eb609d69f1e22e3c9e897 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 84 3.9E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_43880 9ddd7af9ec6eb609d69f1e22e3c9e897 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 52 68 3.9E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_43880 9ddd7af9ec6eb609d69f1e22e3c9e897 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 118 138 3.9E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_43880 9ddd7af9ec6eb609d69f1e22e3c9e897 152 SUPERFAMILY SSF46785 14 141 2.02E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_48930 7ec80a72d1f9c660e75c62a32cc40b63 1615 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1049 1077 0.0013 T 14-10-2018 IPR006530 YD repeat AMIS_48930 7ec80a72d1f9c660e75c62a32cc40b63 1615 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 803 839 8.3E-6 T 14-10-2018 IPR006530 YD repeat AMIS_48930 7ec80a72d1f9c660e75c62a32cc40b63 1615 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 402 438 3.0E-5 T 14-10-2018 IPR006530 YD repeat AMIS_48930 7ec80a72d1f9c660e75c62a32cc40b63 1615 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 946 975 0.0016 T 14-10-2018 IPR006530 YD repeat AMIS_48930 7ec80a72d1f9c660e75c62a32cc40b63 1615 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 673 714 6.9E-5 T 14-10-2018 IPR006530 YD repeat AMIS_48930 7ec80a72d1f9c660e75c62a32cc40b63 1615 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 903 943 6.9E-9 T 14-10-2018 IPR006530 YD repeat AMIS_48930 7ec80a72d1f9c660e75c62a32cc40b63 1615 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 736 765 2.8E-4 T 14-10-2018 IPR006530 YD repeat AMIS_48930 7ec80a72d1f9c660e75c62a32cc40b63 1615 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 360 396 2.3E-6 T 14-10-2018 IPR006530 YD repeat AMIS_48930 7ec80a72d1f9c660e75c62a32cc40b63 1615 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 882 922 5.0E-10 T 14-10-2018 IPR006530 YD repeat AMIS_48930 7ec80a72d1f9c660e75c62a32cc40b63 1615 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 726 755 3.6E-4 T 14-10-2018 IPR006530 YD repeat AMIS_48930 7ec80a72d1f9c660e75c62a32cc40b63 1615 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 385 421 1.4E-4 T 14-10-2018 IPR006530 YD repeat AMIS_48930 7ec80a72d1f9c660e75c62a32cc40b63 1615 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 507 547 3.4E-12 T 14-10-2018 IPR006530 YD repeat AMIS_48930 7ec80a72d1f9c660e75c62a32cc40b63 1615 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 985 1018 0.0035 T 14-10-2018 IPR006530 YD repeat AMIS_48930 7ec80a72d1f9c660e75c62a32cc40b63 1615 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 590 627 5.7E-7 T 14-10-2018 IPR006530 YD repeat AMIS_48930 7ec80a72d1f9c660e75c62a32cc40b63 1615 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 841 878 1.7E-7 T 14-10-2018 IPR006530 YD repeat AMIS_48930 7ec80a72d1f9c660e75c62a32cc40b63 1615 Gene3D G3DSA:3.90.930.1 469 613 2.3E-10 T 14-10-2018 AMIS_48930 7ec80a72d1f9c660e75c62a32cc40b63 1615 Gene3D G3DSA:3.90.930.1 288 407 9.9E-6 T 14-10-2018 AMIS_48930 7ec80a72d1f9c660e75c62a32cc40b63 1615 Pfam PF05593 RHS Repeat 886 919 1.5E-9 T 14-10-2018 IPR031325 RHS repeat AMIS_48930 7ec80a72d1f9c660e75c62a32cc40b63 1615 Pfam PF05593 RHS Repeat 924 956 3.2E-5 T 14-10-2018 IPR031325 RHS repeat AMIS_48930 7ec80a72d1f9c660e75c62a32cc40b63 1615 Pfam PF05593 RHS Repeat 803 835 1.8E-6 T 14-10-2018 IPR031325 RHS repeat AMIS_48930 7ec80a72d1f9c660e75c62a32cc40b63 1615 Pfam PF05593 RHS Repeat 527 563 2.5E-10 T 14-10-2018 IPR031325 RHS repeat AMIS_48930 7ec80a72d1f9c660e75c62a32cc40b63 1615 Pfam PF05593 RHS Repeat 611 646 1.3E-7 T 14-10-2018 IPR031325 RHS repeat AMIS_48930 7ec80a72d1f9c660e75c62a32cc40b63 1615 Pfam PF05593 RHS Repeat 507 541 2.0E-8 T 14-10-2018 IPR031325 RHS repeat AMIS_48930 7ec80a72d1f9c660e75c62a32cc40b63 1615 Pfam PF05593 RHS Repeat 402 436 1.3E-6 T 14-10-2018 IPR031325 RHS repeat AMIS_48930 7ec80a72d1f9c660e75c62a32cc40b63 1615 Pfam PF05593 RHS Repeat 361 396 1.3E-6 T 14-10-2018 IPR031325 RHS repeat AMIS_48930 7ec80a72d1f9c660e75c62a32cc40b63 1615 Pfam PF05593 RHS Repeat 841 877 1.4E-10 T 14-10-2018 IPR031325 RHS repeat AMIS_48930 7ec80a72d1f9c660e75c62a32cc40b63 1615 Pfam PF05593 RHS Repeat 673 709 2.6E-5 T 14-10-2018 IPR031325 RHS repeat AMIS_48930 7ec80a72d1f9c660e75c62a32cc40b63 1615 Pfam PF05593 RHS Repeat 467 501 7.0E-5 T 14-10-2018 IPR031325 RHS repeat AMIS_48930 7ec80a72d1f9c660e75c62a32cc40b63 1615 Pfam PF05593 RHS Repeat 592 627 2.1E-7 T 14-10-2018 IPR031325 RHS repeat AMIS_48930 7ec80a72d1f9c660e75c62a32cc40b63 1615 Gene3D G3DSA:2.180.10.10 879 1163 3.4E-13 T 14-10-2018 AMIS_48930 7ec80a72d1f9c660e75c62a32cc40b63 1615 Gene3D G3DSA:2.180.10.10 1232 1293 6.4E-7 T 14-10-2018 AMIS_48930 7ec80a72d1f9c660e75c62a32cc40b63 1615 Gene3D G3DSA:2.180.10.10 622 840 1.3E-10 T 14-10-2018 AMIS_48930 7ec80a72d1f9c660e75c62a32cc40b63 1615 SUPERFAMILY SSF69304 350 549 1.01E-7 T 14-10-2018 AMIS_48930 7ec80a72d1f9c660e75c62a32cc40b63 1615 SUPERFAMILY SSF50969 619 910 4.24E-5 T 14-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like AMIS_48930 7ec80a72d1f9c660e75c62a32cc40b63 1615 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1229 1293 1.3E-10 T 14-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 AMIS_48930 7ec80a72d1f9c660e75c62a32cc40b63 1615 SUPERFAMILY SSF50960 872 1053 1.44E-5 T 14-10-2018 AMIS_66630 ab010c456dd2d842c93b5ec8404dc67f 283 Pfam PF13466 STAS domain 201 275 1.0E-8 T 14-10-2018 IPR002645 STAS domain AMIS_66630 ab010c456dd2d842c93b5ec8404dc67f 283 Pfam PF14417 MEDS: MEthanogen/methylotroph, DcmR Sensory domain 12 173 3.0E-42 T 14-10-2018 IPR025847 MEDS domain AMIS_66630 ab010c456dd2d842c93b5ec8404dc67f 283 SUPERFAMILY SSF52091 200 281 1.51E-9 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_66630 ab010c456dd2d842c93b5ec8404dc67f 283 Gene3D G3DSA:3.30.750.24 192 282 1.5E-10 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_42990 b72bc4fd7ab108addeec6c7b507f5252 333 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 73 78 - T 14-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 AMIS_42990 b72bc4fd7ab108addeec6c7b507f5252 333 SMART SM00020 27 248 1.6E-17 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 AMIS_42990 b72bc4fd7ab108addeec6c7b507f5252 333 SUPERFAMILY SSF50494 20 254 5.25E-37 T 14-10-2018 IPR009003 Peptidase S1, PA clan AMIS_42990 b72bc4fd7ab108addeec6c7b507f5252 333 Gene3D G3DSA:2.40.10.10 121 255 1.3E-15 T 14-10-2018 AMIS_42990 b72bc4fd7ab108addeec6c7b507f5252 333 Gene3D G3DSA:2.40.10.10 28 120 3.4E-11 T 14-10-2018 AMIS_42990 b72bc4fd7ab108addeec6c7b507f5252 333 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 120 134 5.6E-8 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AMIS_42990 b72bc4fd7ab108addeec6c7b507f5252 333 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 63 78 5.6E-8 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AMIS_42990 b72bc4fd7ab108addeec6c7b507f5252 333 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 198 210 5.6E-8 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AMIS_42990 b72bc4fd7ab108addeec6c7b507f5252 333 Pfam PF00089 Trypsin 29 248 2.1E-24 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 AMIS_61840 b178f98496a6ec342d385ef6bbbbde23 130 SUPERFAMILY SSF74731 3 116 2.09E-44 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_61840 b178f98496a6ec342d385ef6bbbbde23 130 Gene3D G3DSA:1.10.1900.20 56 119 1.3E-26 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_61840 b178f98496a6ec342d385ef6bbbbde23 130 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 27.884 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_61840 b178f98496a6ec342d385ef6bbbbde23 130 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 70 2.0E-20 T 14-10-2018 AMIS_61840 b178f98496a6ec342d385ef6bbbbde23 130 Pfam PF00453 Ribosomal protein L20 3 107 6.5E-44 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_61840 b178f98496a6ec342d385ef6bbbbde23 130 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 113 1.8E-45 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_61840 b178f98496a6ec342d385ef6bbbbde23 130 Gene3D G3DSA:1.10.720.90 2 55 8.4E-19 T 14-10-2018 AMIS_61840 b178f98496a6ec342d385ef6bbbbde23 130 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_61840 b178f98496a6ec342d385ef6bbbbde23 130 PRINTS PR00062 Ribosomal protein L20 signature 42 71 3.3E-38 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_61840 b178f98496a6ec342d385ef6bbbbde23 130 PRINTS PR00062 Ribosomal protein L20 signature 75 101 3.3E-38 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_61840 b178f98496a6ec342d385ef6bbbbde23 130 PRINTS PR00062 Ribosomal protein L20 signature 12 41 3.3E-38 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_28290 19d807094d0f4add6c99a9676fa62395 451 Gene3D G3DSA:2.60.40.290 355 451 2.4E-22 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 AMIS_28290 19d807094d0f4add6c99a9676fa62395 451 Gene3D G3DSA:3.20.20.80 33 340 3.1E-116 T 14-10-2018 AMIS_28290 19d807094d0f4add6c99a9676fa62395 451 ProSitePatterns PS00591 Glycosyl hydrolases family 10 (GH10) active site. 258 268 - T 14-10-2018 IPR031158 Glycosyl hydrolases family 10, active site MetaCyc: PWY-6717|MetaCyc: PWY-6784 AMIS_28290 19d807094d0f4add6c99a9676fa62395 451 PRINTS PR00134 Glycosyl hydrolase family 10 signature 152 163 1.3E-16 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 AMIS_28290 19d807094d0f4add6c99a9676fa62395 451 PRINTS PR00134 Glycosyl hydrolase family 10 signature 226 238 1.3E-16 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 AMIS_28290 19d807094d0f4add6c99a9676fa62395 451 PRINTS PR00134 Glycosyl hydrolase family 10 signature 110 122 1.3E-16 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 AMIS_28290 19d807094d0f4add6c99a9676fa62395 451 PRINTS PR00134 Glycosyl hydrolase family 10 signature 197 208 1.3E-16 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 AMIS_28290 19d807094d0f4add6c99a9676fa62395 451 SUPERFAMILY SSF51445 39 332 3.47E-109 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_28290 19d807094d0f4add6c99a9676fa62395 451 Pfam PF00553 Cellulose binding domain 358 447 2.3E-18 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 AMIS_28290 19d807094d0f4add6c99a9676fa62395 451 SMART SM00637 358 448 2.2E-24 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 AMIS_28290 19d807094d0f4add6c99a9676fa62395 451 Pfam PF00331 Glycosyl hydrolase family 10 39 329 7.0E-104 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 AMIS_28290 19d807094d0f4add6c99a9676fa62395 451 SUPERFAMILY SSF49384 352 448 1.26E-22 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 AMIS_28290 19d807094d0f4add6c99a9676fa62395 451 SMART SM00633 79 331 5.9E-128 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 AMIS_19040 25e7e44a8505c73d0e2b1ab735c4210c 375 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 210 1.3E-17 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMIS_19040 25e7e44a8505c73d0e2b1ab735c4210c 375 Gene3D G3DSA:1.20.140.10 232 374 1.9E-19 T 14-10-2018 AMIS_19040 25e7e44a8505c73d0e2b1ab735c4210c 375 SUPERFAMILY SSF56645 4 241 1.83E-65 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMIS_19040 25e7e44a8505c73d0e2b1ab735c4210c 375 SUPERFAMILY SSF47203 228 372 4.0E-11 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMIS_19040 25e7e44a8505c73d0e2b1ab735c4210c 375 Gene3D G3DSA:2.40.110.10 121 231 2.4E-32 T 14-10-2018 AMIS_19040 25e7e44a8505c73d0e2b1ab735c4210c 375 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 228 366 8.1E-16 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMIS_19040 25e7e44a8505c73d0e2b1ab735c4210c 375 Gene3D G3DSA:1.10.540.10 2 117 4.9E-31 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMIS_19040 25e7e44a8505c73d0e2b1ab735c4210c 375 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 118 7.4E-23 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMIS_76360 fdadc5be0fb288904e878d4d47496e2f 361 Pfam PF01312 FlhB HrpN YscU SpaS Family 3 340 1.1E-112 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AMIS_76360 fdadc5be0fb288904e878d4d47496e2f 361 SUPERFAMILY SSF160544 238 344 7.19E-35 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal AMIS_76360 fdadc5be0fb288904e878d4d47496e2f 361 Gene3D G3DSA:3.40.1690.10 211 351 1.9E-53 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal AMIS_76360 fdadc5be0fb288904e878d4d47496e2f 361 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 202 220 8.8E-35 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AMIS_76360 fdadc5be0fb288904e878d4d47496e2f 361 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 266 281 8.8E-35 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AMIS_76360 fdadc5be0fb288904e878d4d47496e2f 361 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 295 316 8.8E-35 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AMIS_76360 fdadc5be0fb288904e878d4d47496e2f 361 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 6 28 8.8E-35 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AMIS_76360 fdadc5be0fb288904e878d4d47496e2f 361 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 222 239 8.8E-35 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AMIS_55530 dea59334842c7133040fded76d70b765 1054 SUPERFAMILY SSF48452 92 241 4.05E-21 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_55530 dea59334842c7133040fded76d70b765 1054 PRINTS PR00364 Disease resistance protein signature 272 287 1.6E-5 T 14-10-2018 AMIS_55530 dea59334842c7133040fded76d70b765 1054 PRINTS PR00364 Disease resistance protein signature 448 462 1.6E-5 T 14-10-2018 AMIS_55530 dea59334842c7133040fded76d70b765 1054 PRINTS PR00364 Disease resistance protein signature 346 360 1.6E-5 T 14-10-2018 AMIS_55530 dea59334842c7133040fded76d70b765 1054 SUPERFAMILY SSF48452 798 933 7.05E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_55530 dea59334842c7133040fded76d70b765 1054 Pfam PF03704 Bacterial transcriptional activator domain 95 231 5.1E-30 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain AMIS_55530 dea59334842c7133040fded76d70b765 1054 Gene3D G3DSA:1.10.10.10 1 91 3.6E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_55530 dea59334842c7133040fded76d70b765 1054 Pfam PF00486 Transcriptional regulatory protein, C terminal 27 76 6.1E-8 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_55530 dea59334842c7133040fded76d70b765 1054 SUPERFAMILY SSF52540 243 515 3.9E-16 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_55530 dea59334842c7133040fded76d70b765 1054 Gene3D G3DSA:1.25.40.10 764 1044 1.3E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_55530 dea59334842c7133040fded76d70b765 1054 SMART SM01043 95 231 3.4E-39 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain AMIS_55530 dea59334842c7133040fded76d70b765 1054 Gene3D G3DSA:1.25.40.10 93 256 5.9E-38 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_55530 dea59334842c7133040fded76d70b765 1054 SMART SM00862 16 88 1.8E-9 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_55530 dea59334842c7133040fded76d70b765 1054 SUPERFAMILY SSF46894 3 81 5.95E-13 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_22440 21f710d2771ca9f444b3b57306ab26cc 738 Gene3D G3DSA:3.40.225.10 2 220 6.0E-59 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily AMIS_22440 21f710d2771ca9f444b3b57306ab26cc 738 Gene3D G3DSA:3.90.1150.10 308 729 6.0E-112 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMIS_22440 21f710d2771ca9f444b3b57306ab26cc 738 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 533 569 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMIS_22440 21f710d2771ca9f444b3b57306ab26cc 738 SUPERFAMILY SSF53639 7 215 1.04E-49 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily AMIS_22440 21f710d2771ca9f444b3b57306ab26cc 738 SUPERFAMILY SSF53383 321 732 1.55E-82 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_22440 21f710d2771ca9f444b3b57306ab26cc 738 Gene3D G3DSA:3.40.640.10 367 622 6.0E-112 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_22440 21f710d2771ca9f444b3b57306ab26cc 738 Pfam PF00202 Aminotransferase class-III 329 665 1.7E-50 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMIS_22440 21f710d2771ca9f444b3b57306ab26cc 738 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 9 186 1.7E-43 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal AMIS_22440 21f710d2771ca9f444b3b57306ab26cc 738 SMART SM01007 8 191 3.1E-53 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal AMIS_49890 e32788e1a9ac3734205c2dba4c83dede 289 Gene3D G3DSA:3.40.50.720 1 271 1.3E-38 T 14-10-2018 AMIS_49890 e32788e1a9ac3734205c2dba4c83dede 289 Pfam PF01370 NAD dependent epimerase/dehydratase family 1 206 1.5E-15 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AMIS_49890 e32788e1a9ac3734205c2dba4c83dede 289 SUPERFAMILY SSF51735 1 280 5.34E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_50670 75cb826c9ee6e0f30089b9d182917b61 396 SUPERFAMILY SSF56601 4 379 1.01E-66 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMIS_50670 75cb826c9ee6e0f30089b9d182917b61 396 Gene3D G3DSA:3.40.710.30 1 385 2.0E-104 T 14-10-2018 AMIS_50670 75cb826c9ee6e0f30089b9d182917b61 396 Pfam PF00144 Beta-lactamase 14 374 1.8E-62 T 14-10-2018 IPR001466 Beta-lactamase-related AMIS_17980 37329c5890ac6b36d4660a5db659711e 494 PRINTS PR01036 Tetracycline resistance protein TetB signature 402 421 2.1E-8 T 14-10-2018 AMIS_17980 37329c5890ac6b36d4660a5db659711e 494 PRINTS PR01036 Tetracycline resistance protein TetB signature 74 96 2.1E-8 T 14-10-2018 AMIS_17980 37329c5890ac6b36d4660a5db659711e 494 PRINTS PR01036 Tetracycline resistance protein TetB signature 162 186 2.1E-8 T 14-10-2018 AMIS_17980 37329c5890ac6b36d4660a5db659711e 494 PRINTS PR01036 Tetracycline resistance protein TetB signature 137 161 2.1E-8 T 14-10-2018 AMIS_17980 37329c5890ac6b36d4660a5db659711e 494 Gene3D G3DSA:1.20.1250.20 276 463 7.7E-19 T 14-10-2018 AMIS_17980 37329c5890ac6b36d4660a5db659711e 494 SUPERFAMILY SSF103473 5 458 3.27E-58 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_17980 37329c5890ac6b36d4660a5db659711e 494 Gene3D G3DSA:1.20.1720.10 12 228 3.3E-35 T 14-10-2018 AMIS_17980 37329c5890ac6b36d4660a5db659711e 494 Pfam PF07690 Major Facilitator Superfamily 16 412 2.6E-48 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_58150 c714f6337f61b3dab2ba4e6b5157b91a 340 SUPERFAMILY SSF55729 146 319 3.18E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_58150 c714f6337f61b3dab2ba4e6b5157b91a 340 Gene3D G3DSA:3.40.630.30 139 300 9.4E-17 T 14-10-2018 AMIS_58150 c714f6337f61b3dab2ba4e6b5157b91a 340 Pfam PF13480 Acetyltransferase (GNAT) domain 153 283 1.3E-10 T 14-10-2018 IPR038740 BioF2-like, acetyltransferase domain KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 AMIS_19980 ed46d1954f892f6770ac651e388a8fc8 97 Gene3D G3DSA:2.40.50.140 5 95 2.2E-5 T 14-10-2018 AMIS_19980 ed46d1954f892f6770ac651e388a8fc8 97 SUPERFAMILY SSF50249 3 79 2.94E-5 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMIS_19980 ed46d1954f892f6770ac651e388a8fc8 97 Pfam PF01336 OB-fold nucleic acid binding domain 21 95 8.2E-7 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AMIS_5810 22a51c71858d5b99c32f2ed6ea296b95 271 ProSitePatterns PS00380 Rhodanese signature 1. 36 47 - T 14-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 AMIS_5810 22a51c71858d5b99c32f2ed6ea296b95 271 Pfam PF00581 Rhodanese-like domain 8 123 2.3E-14 T 14-10-2018 IPR001763 Rhodanese-like domain AMIS_5810 22a51c71858d5b99c32f2ed6ea296b95 271 Pfam PF00581 Rhodanese-like domain 158 259 7.3E-9 T 14-10-2018 IPR001763 Rhodanese-like domain AMIS_5810 22a51c71858d5b99c32f2ed6ea296b95 271 SUPERFAMILY SSF52821 156 269 4.19E-28 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily AMIS_5810 22a51c71858d5b99c32f2ed6ea296b95 271 Gene3D G3DSA:3.40.250.10 2 145 1.1E-45 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily AMIS_5810 22a51c71858d5b99c32f2ed6ea296b95 271 Gene3D G3DSA:3.40.250.10 148 268 9.6E-30 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily AMIS_5810 22a51c71858d5b99c32f2ed6ea296b95 271 SMART SM00450 4 128 1.9E-18 T 14-10-2018 IPR001763 Rhodanese-like domain AMIS_5810 22a51c71858d5b99c32f2ed6ea296b95 271 SMART SM00450 145 264 2.6E-9 T 14-10-2018 IPR001763 Rhodanese-like domain AMIS_5810 22a51c71858d5b99c32f2ed6ea296b95 271 SUPERFAMILY SSF52821 3 143 9.3E-38 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily AMIS_41720 d49773bb8edc3968b710aaf588321ce3 254 Pfam PF01925 Sulfite exporter TauE/SafE 6 245 3.1E-35 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AMIS_28300 103b47da9fdf27c48a34051f10049f7c 368 Pfam PF00652 Ricin-type beta-trefoil lectin domain 247 365 1.0E-28 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_28300 103b47da9fdf27c48a34051f10049f7c 368 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 47 220 3.5E-19 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain AMIS_28300 103b47da9fdf27c48a34051f10049f7c 368 SUPERFAMILY SSF50370 243 366 2.23E-39 T 14-10-2018 IPR035992 Ricin B-like lectins AMIS_28300 103b47da9fdf27c48a34051f10049f7c 368 Gene3D G3DSA:2.80.10.50 331 368 2.6E-12 T 14-10-2018 AMIS_28300 103b47da9fdf27c48a34051f10049f7c 368 SMART SM00458 244 368 7.1E-28 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_28300 103b47da9fdf27c48a34051f10049f7c 368 SUPERFAMILY SSF52266 33 231 1.24E-32 T 14-10-2018 AMIS_28300 103b47da9fdf27c48a34051f10049f7c 368 Gene3D G3DSA:3.40.50.1110 38 240 4.0E-64 T 14-10-2018 IPR036514 SGNH hydrolase superfamily AMIS_28300 103b47da9fdf27c48a34051f10049f7c 368 Gene3D G3DSA:2.80.10.50 244 330 3.2E-26 T 14-10-2018 AMIS_63450 ef4f507722e0c25a80c08639e2ee9477 400 Gene3D G3DSA:3.40.50.2000 186 367 1.7E-104 T 14-10-2018 AMIS_63450 ef4f507722e0c25a80c08639e2ee9477 400 SUPERFAMILY SSF53756 3 387 1.4E-77 T 14-10-2018 AMIS_63450 ef4f507722e0c25a80c08639e2ee9477 400 Gene3D G3DSA:3.40.50.2000 5 384 1.7E-104 T 14-10-2018 AMIS_63450 ef4f507722e0c25a80c08639e2ee9477 400 Pfam PF00534 Glycosyl transferases group 1 200 356 5.6E-25 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 AMIS_63450 ef4f507722e0c25a80c08639e2ee9477 400 Pfam PF13439 Glycosyltransferase Family 4 17 189 2.8E-29 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AMIS_17430 f7aa51db2f233e2797c9b331e8cc39ab 432 Gene3D G3DSA:3.30.465.10 332 420 4.3E-18 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AMIS_17430 f7aa51db2f233e2797c9b331e8cc39ab 432 SUPERFAMILY SSF54631 207 344 6.32E-27 T 14-10-2018 AMIS_17430 f7aa51db2f233e2797c9b331e8cc39ab 432 SMART SM01091 340 421 1.3E-16 T 14-10-2018 IPR005170 Transporter-associated domain AMIS_17430 f7aa51db2f233e2797c9b331e8cc39ab 432 Pfam PF01595 Domain of unknown function DUF21 10 190 5.8E-43 T 14-10-2018 IPR002550 CNNM, transmembrane domain AMIS_17430 f7aa51db2f233e2797c9b331e8cc39ab 432 SUPERFAMILY SSF56176 339 429 1.45E-15 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AMIS_17430 f7aa51db2f233e2797c9b331e8cc39ab 432 SMART SM00116 219 269 1.7E-4 T 14-10-2018 IPR000644 CBS domain AMIS_17430 f7aa51db2f233e2797c9b331e8cc39ab 432 SMART SM00116 277 325 23.0 T 14-10-2018 IPR000644 CBS domain AMIS_17430 f7aa51db2f233e2797c9b331e8cc39ab 432 Pfam PF03471 Transporter associated domain 341 419 6.0E-16 T 14-10-2018 IPR005170 Transporter-associated domain AMIS_17430 f7aa51db2f233e2797c9b331e8cc39ab 432 Pfam PF00571 CBS domain 215 267 4.3E-7 T 14-10-2018 IPR000644 CBS domain AMIS_17430 f7aa51db2f233e2797c9b331e8cc39ab 432 Pfam PF00571 CBS domain 271 324 1.9E-7 T 14-10-2018 IPR000644 CBS domain AMIS_17430 f7aa51db2f233e2797c9b331e8cc39ab 432 Gene3D G3DSA:3.10.580.10 190 331 1.3E-39 T 14-10-2018 AMIS_55580 3a09261f03b06e7e13b6e7e9f8b8355d 770 Gene3D G3DSA:1.20.1640.10 491 687 1.9E-9 T 14-10-2018 AMIS_55580 3a09261f03b06e7e13b6e7e9f8b8355d 770 SUPERFAMILY SSF82866 118 334 1.7E-28 T 14-10-2018 AMIS_55580 3a09261f03b06e7e13b6e7e9f8b8355d 770 Gene3D G3DSA:1.20.1640.10 171 344 9.7E-6 T 14-10-2018 AMIS_55580 3a09261f03b06e7e13b6e7e9f8b8355d 770 Pfam PF03176 MMPL family 435 689 5.3E-36 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 AMIS_55580 3a09261f03b06e7e13b6e7e9f8b8355d 770 Pfam PF03176 MMPL family 45 361 1.6E-63 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 AMIS_55580 3a09261f03b06e7e13b6e7e9f8b8355d 770 SUPERFAMILY SSF82866 454 689 1.7E-31 T 14-10-2018 AMIS_78110 1d960e01a9715b11d5895cb6dbfba18b 1268 TIGRFAM TIGR03924 T7SS_EccC_a: type VII secretion protein EccCa 24 666 8.5E-242 T 14-10-2018 IPR023836 EccCa-like, Actinobacteria AMIS_78110 1d960e01a9715b11d5895cb6dbfba18b 1268 SUPERFAMILY SSF52540 1017 1184 3.45E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_78110 1d960e01a9715b11d5895cb6dbfba18b 1268 SUPERFAMILY SSF52540 740 957 2.6E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_78110 1d960e01a9715b11d5895cb6dbfba18b 1268 TIGRFAM TIGR03925 T7SS_EccC_b: type VII secretion protein EccCb 705 1251 1.2E-204 T 14-10-2018 IPR023837 EccCb-like, Actinobacteria AMIS_78110 1d960e01a9715b11d5895cb6dbfba18b 1268 Gene3D G3DSA:3.40.50.300 727 1012 6.0E-72 T 14-10-2018 AMIS_78110 1d960e01a9715b11d5895cb6dbfba18b 1268 SUPERFAMILY SSF52540 391 666 3.39E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_78110 1d960e01a9715b11d5895cb6dbfba18b 1268 Pfam PF01580 FtsK/SpoIIIE family 873 983 8.9E-15 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 AMIS_78110 1d960e01a9715b11d5895cb6dbfba18b 1268 Pfam PF01580 FtsK/SpoIIIE family 413 535 2.7E-25 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 AMIS_78110 1d960e01a9715b11d5895cb6dbfba18b 1268 Pfam PF01580 FtsK/SpoIIIE family 1039 1125 6.1E-10 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 AMIS_78110 1d960e01a9715b11d5895cb6dbfba18b 1268 Pfam PF01580 FtsK/SpoIIIE family 765 867 5.5E-24 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 AMIS_78110 1d960e01a9715b11d5895cb6dbfba18b 1268 Gene3D G3DSA:3.40.50.300 1019 1253 2.6E-60 T 14-10-2018 AMIS_78110 1d960e01a9715b11d5895cb6dbfba18b 1268 SMART SM00382 784 939 0.14 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_78110 1d960e01a9715b11d5895cb6dbfba18b 1268 SMART SM00382 443 623 5.5E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_78110 1d960e01a9715b11d5895cb6dbfba18b 1268 SMART SM00382 1047 1249 14.0 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_56430 eef626a08c995a0c3574e9c98a69cda5 145 Gene3D G3DSA:1.10.10.10 1 136 1.1E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_56430 eef626a08c995a0c3574e9c98a69cda5 145 SUPERFAMILY SSF46785 2 130 2.48E-28 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_56430 eef626a08c995a0c3574e9c98a69cda5 145 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 47 65 - T 14-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site AMIS_56430 eef626a08c995a0c3574e9c98a69cda5 145 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 2 128 1.3E-24 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type AMIS_56430 eef626a08c995a0c3574e9c98a69cda5 145 Pfam PF02082 Transcriptional regulator 2 79 1.2E-16 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type AMIS_13470 0cefe3fef95a808b9208551396c243a8 488 Pfam PF00773 RNB domain 47 369 5.2E-40 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 AMIS_13470 0cefe3fef95a808b9208551396c243a8 488 SUPERFAMILY SSF50249 10 422 7.42E-83 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMIS_13470 0cefe3fef95a808b9208551396c243a8 488 SMART SM00955 45 379 7.0E-53 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 AMIS_69410 dc90c4f6c8af05801b8f62a35554dcc5 401 SUPERFAMILY SSF103088 289 395 3.14E-22 T 14-10-2018 IPR036737 OmpA-like domain superfamily AMIS_69410 dc90c4f6c8af05801b8f62a35554dcc5 401 PRINTS PR01021 OMPA domain signature 343 359 1.7E-10 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMIS_69410 dc90c4f6c8af05801b8f62a35554dcc5 401 PRINTS PR01021 OMPA domain signature 298 320 1.7E-10 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMIS_69410 dc90c4f6c8af05801b8f62a35554dcc5 401 PRINTS PR01021 OMPA domain signature 328 343 1.7E-10 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMIS_69410 dc90c4f6c8af05801b8f62a35554dcc5 401 Pfam PF00691 OmpA family 297 375 1.4E-12 T 14-10-2018 IPR006665 OmpA-like domain AMIS_69410 dc90c4f6c8af05801b8f62a35554dcc5 401 Gene3D G3DSA:3.40.50.410 45 255 2.5E-8 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMIS_69410 dc90c4f6c8af05801b8f62a35554dcc5 401 Gene3D G3DSA:3.30.1330.60 283 399 4.0E-25 T 14-10-2018 IPR036737 OmpA-like domain superfamily AMIS_28170 1f685abdd4773b5880fe4cdc5ff2d209 239 ProSitePatterns PS00211 ABC transporters family signature. 128 142 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_28170 1f685abdd4773b5880fe4cdc5ff2d209 239 TIGRFAM TIGR03771 anch_rpt_ABC: anchored repeat-type ABC transporter, ATP-binding subunit 24 235 2.7E-95 T 14-10-2018 IPR022508 ABC transporter, anchored repeat-type, ATP-binding subunit AMIS_28170 1f685abdd4773b5880fe4cdc5ff2d209 239 SUPERFAMILY SSF52540 3 214 2.92E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_28170 1f685abdd4773b5880fe4cdc5ff2d209 239 Gene3D G3DSA:3.40.50.300 1 222 5.4E-56 T 14-10-2018 AMIS_28170 1f685abdd4773b5880fe4cdc5ff2d209 239 Pfam PF00005 ABC transporter 19 155 2.6E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_28170 1f685abdd4773b5880fe4cdc5ff2d209 239 SMART SM00382 28 202 1.0E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_63040 8daabf24e1904123fc1803f51c094374 325 Gene3D G3DSA:3.20.20.100 2 324 9.6E-75 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMIS_63040 8daabf24e1904123fc1803f51c094374 325 Pfam PF00248 Aldo/keto reductase family 16 312 3.7E-57 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain AMIS_63040 8daabf24e1904123fc1803f51c094374 325 SUPERFAMILY SSF51430 4 317 1.07E-73 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMIS_30670 ed3a30dda811f369b96aa5bad2141860 135 Gene3D G3DSA:3.10.450.50 10 133 1.4E-28 T 14-10-2018 AMIS_30670 ed3a30dda811f369b96aa5bad2141860 135 Pfam PF14534 Domain of unknown function (DUF4440) 16 120 2.6E-9 T 14-10-2018 IPR027843 Domain of unknown function DUF4440 AMIS_30670 ed3a30dda811f369b96aa5bad2141860 135 SUPERFAMILY SSF54427 14 129 1.47E-19 T 14-10-2018 IPR032710 NTF2-like domain superfamily AMIS_72030 b69258a3572250d5b0945e1601690f3c 313 PIRSF PIRSF004930 2 313 2.4E-96 T 14-10-2018 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 AMIS_72030 b69258a3572250d5b0945e1601690f3c 313 SUPERFAMILY SSF55821 4 201 1.22E-56 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AMIS_72030 b69258a3572250d5b0945e1601690f3c 313 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 5 198 6.0E-52 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 AMIS_72030 b69258a3572250d5b0945e1601690f3c 313 Pfam PF03481 Putative GTP-binding controlling metal-binding 195 312 4.1E-22 T 14-10-2018 IPR005145 Putative GTP-binding controlling metal-binding domain AMIS_72030 b69258a3572250d5b0945e1601690f3c 313 Pfam PF01300 Telomere recombination 15 189 7.2E-50 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 AMIS_72030 b69258a3572250d5b0945e1601690f3c 313 Gene3D G3DSA:3.40.50.11030 207 313 3.1E-15 T 14-10-2018 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily AMIS_72030 b69258a3572250d5b0945e1601690f3c 313 Gene3D G3DSA:3.90.870.10 2 204 1.3E-71 T 14-10-2018 AMIS_42920 ae245b754d947fa2c4da5f2fa3a1d023 211 Pfam PF00881 Nitroreductase family 9 175 3.8E-25 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AMIS_42920 ae245b754d947fa2c4da5f2fa3a1d023 211 Gene3D G3DSA:3.40.109.10 1 178 3.5E-42 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AMIS_42920 ae245b754d947fa2c4da5f2fa3a1d023 211 SUPERFAMILY SSF55469 4 207 3.53E-44 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AMIS_42920 ae245b754d947fa2c4da5f2fa3a1d023 211 TIGRFAM TIGR02476 BluB: 5,6-dimethylbenzimidazole synthase 3 200 4.8E-66 T 14-10-2018 IPR012825 5,6-dimethylbenzimidazole synthase BluB KEGG: 00740+1.13.11.79|MetaCyc: PWY-5523 AMIS_35350 d82c625d36a0d09d2f168aab11a87516 213 Gene3D G3DSA:3.40.50.880 1 213 1.6E-38 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_35350 d82c625d36a0d09d2f168aab11a87516 213 SUPERFAMILY SSF52317 2 213 1.4E-42 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_35350 d82c625d36a0d09d2f168aab11a87516 213 Pfam PF06283 Trehalose utilisation 2 211 2.5E-45 T 14-10-2018 IPR029010 ThuA-like domain AMIS_63930 148e678f05843d7ac358305864ea366d 309 SUPERFAMILY SSF48179 178 298 9.35E-24 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMIS_63930 148e678f05843d7ac358305864ea366d 309 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 151 4.5E-35 T 14-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain AMIS_63930 148e678f05843d7ac358305864ea366d 309 Gene3D G3DSA:3.40.50.720 1 175 1.3E-46 T 14-10-2018 AMIS_63930 148e678f05843d7ac358305864ea366d 309 Gene3D G3DSA:1.10.1040.10 177 305 1.2E-22 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AMIS_63930 148e678f05843d7ac358305864ea366d 309 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 178 292 1.3E-22 T 14-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain AMIS_63930 148e678f05843d7ac358305864ea366d 309 SUPERFAMILY SSF51735 1 112 1.13E-12 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_63930 148e678f05843d7ac358305864ea366d 309 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 297 3.5E-62 T 14-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 AMIS_58300 50b0e002c432458d339fb8eaf477f3cd 201 SUPERFAMILY SSF52172 1 129 1.51E-8 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_58300 50b0e002c432458d339fb8eaf477f3cd 201 SUPERFAMILY SSF46894 127 200 6.46E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_58300 50b0e002c432458d339fb8eaf477f3cd 201 Gene3D G3DSA:3.40.50.12740 2 200 7.2E-30 T 14-10-2018 AMIS_58300 50b0e002c432458d339fb8eaf477f3cd 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 182 5.4E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_58300 50b0e002c432458d339fb8eaf477f3cd 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 140 154 5.4E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_58300 50b0e002c432458d339fb8eaf477f3cd 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 170 5.4E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_58300 50b0e002c432458d339fb8eaf477f3cd 201 ProSitePatterns PS00622 LuxR-type HTH domain signature. 154 181 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_58300 50b0e002c432458d339fb8eaf477f3cd 201 SMART SM00421 137 194 7.6E-22 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_58300 50b0e002c432458d339fb8eaf477f3cd 201 Pfam PF00196 Bacterial regulatory proteins, luxR family 140 194 8.8E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_56160 7852d41d37deac94973e2f09031aaf64 89 Pfam PF02325 YGGT family 8 88 2.0E-17 T 14-10-2018 IPR003425 CCB3/YggT GO:0016020 AMIS_69370 883d0fa7794d516be783a7d70edc9029 185 Pfam PF10825 Protein of unknown function (DUF2752) 88 136 1.4E-17 T 14-10-2018 IPR021215 Protein of unknown function DUF2752 AMIS_40100 429e6d4e37289e7a5ef735c96b515c23 223 Gene3D G3DSA:3.40.50.150 15 181 4.9E-31 T 14-10-2018 AMIS_40100 429e6d4e37289e7a5ef735c96b515c23 223 Pfam PF13649 Methyltransferase domain 60 149 2.3E-18 T 14-10-2018 AMIS_40100 429e6d4e37289e7a5ef735c96b515c23 223 SUPERFAMILY SSF53335 17 214 5.27E-29 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_10140 0aa0d282c7208965f015de7f4eebf961 357 SUPERFAMILY SSF144083 292 354 3.4E-17 T 14-10-2018 AMIS_10140 0aa0d282c7208965f015de7f4eebf961 357 Gene3D G3DSA:1.20.58.340 280 357 3.4E-19 T 14-10-2018 AMIS_10140 0aa0d282c7208965f015de7f4eebf961 357 Gene3D G3DSA:1.20.58.340 169 279 2.7E-21 T 14-10-2018 AMIS_10140 0aa0d282c7208965f015de7f4eebf961 357 SUPERFAMILY SSF143865 16 290 3.79E-47 T 14-10-2018 AMIS_10140 0aa0d282c7208965f015de7f4eebf961 357 Gene3D G3DSA:3.30.460.20 17 168 5.8E-17 T 14-10-2018 AMIS_10140 0aa0d282c7208965f015de7f4eebf961 357 Pfam PF01544 CorA-like Mg2+ transporter protein 62 347 4.9E-50 T 14-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 AMIS_34130 3a9e07384fabdb84b2d1fd5dd2aa31bf 261 Pfam PF07920 Protein of unknown function (DUF1684) 120 257 2.1E-42 T 14-10-2018 IPR012467 Protein of unknown function DUF1684 AMIS_57780 826f01a4c6a763fb07b9cf3d41a70c90 287 SMART SM00382 32 198 4.2E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_57780 826f01a4c6a763fb07b9cf3d41a70c90 287 SUPERFAMILY SSF52540 26 252 4.8E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_57780 826f01a4c6a763fb07b9cf3d41a70c90 287 Pfam PF07728 AAA domain (dynein-related subfamily) 35 187 2.3E-12 T 14-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 AMIS_57780 826f01a4c6a763fb07b9cf3d41a70c90 287 Gene3D G3DSA:3.40.50.300 20 205 1.8E-28 T 14-10-2018 AMIS_13520 6040fafb080c12043db398868b91e876 202 SUPERFAMILY SSF88946 4 106 2.49E-22 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_13520 6040fafb080c12043db398868b91e876 202 Pfam PF08281 Sigma-70, region 4 124 175 7.6E-8 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_13520 6040fafb080c12043db398868b91e876 202 SUPERFAMILY SSF88659 117 179 1.59E-7 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_13520 6040fafb080c12043db398868b91e876 202 Gene3D G3DSA:1.10.10.10 125 181 1.4E-10 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_13520 6040fafb080c12043db398868b91e876 202 Pfam PF04542 Sigma-70 region 2 25 92 2.1E-11 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_13520 6040fafb080c12043db398868b91e876 202 Gene3D G3DSA:1.10.1740.10 6 123 3.0E-22 T 14-10-2018 AMIS_13520 6040fafb080c12043db398868b91e876 202 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 179 1.5E-16 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_64420 779944275e45e7784ce9032e4070cb36 326 Gene3D G3DSA:1.10.3720.10 91 315 3.6E-17 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_64420 779944275e45e7784ce9032e4070cb36 326 SUPERFAMILY SSF161098 96 323 1.23E-13 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_64420 779944275e45e7784ce9032e4070cb36 326 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 324 2.3E-41 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_9100 10f375e795ada5ae5192ea01444e0cdb 807 SUPERFAMILY SSF48452 390 486 4.17E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_9100 10f375e795ada5ae5192ea01444e0cdb 807 Pfam PF13424 Tetratricopeptide repeat 510 571 1.1E-7 T 14-10-2018 AMIS_9100 10f375e795ada5ae5192ea01444e0cdb 807 Pfam PF13424 Tetratricopeptide repeat 628 692 1.4E-9 T 14-10-2018 AMIS_9100 10f375e795ada5ae5192ea01444e0cdb 807 SUPERFAMILY SSF48452 586 693 1.66E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_9100 10f375e795ada5ae5192ea01444e0cdb 807 Gene3D G3DSA:3.40.50.300 1 157 3.4E-20 T 14-10-2018 AMIS_9100 10f375e795ada5ae5192ea01444e0cdb 807 SUPERFAMILY SSF48452 464 572 9.49E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_9100 10f375e795ada5ae5192ea01444e0cdb 807 SUPERFAMILY SSF52540 3 220 6.73E-16 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_9100 10f375e795ada5ae5192ea01444e0cdb 807 Pfam PF13374 Tetratricopeptide repeat 425 460 2.8E-5 T 14-10-2018 AMIS_9100 10f375e795ada5ae5192ea01444e0cdb 807 Pfam PF13374 Tetratricopeptide repeat 712 753 1.9E-4 T 14-10-2018 AMIS_9100 10f375e795ada5ae5192ea01444e0cdb 807 Pfam PF13374 Tetratricopeptide repeat 464 504 0.0023 T 14-10-2018 AMIS_9100 10f375e795ada5ae5192ea01444e0cdb 807 Gene3D G3DSA:1.25.40.10 381 577 5.3E-31 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_9100 10f375e795ada5ae5192ea01444e0cdb 807 Gene3D G3DSA:1.25.40.10 581 783 8.4E-31 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_35500 ccd98474d63eda3635b84fe0fd4a0e74 345 Gene3D G3DSA:3.40.50.1980 181 345 2.6E-48 T 14-10-2018 AMIS_35500 ccd98474d63eda3635b84fe0fd4a0e74 345 Pfam PF01497 Periplasmic binding protein 62 312 4.7E-31 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain AMIS_35500 ccd98474d63eda3635b84fe0fd4a0e74 345 Gene3D G3DSA:3.40.50.1980 38 179 5.0E-44 T 14-10-2018 AMIS_35500 ccd98474d63eda3635b84fe0fd4a0e74 345 SUPERFAMILY SSF53807 38 314 4.32E-48 T 14-10-2018 AMIS_7110 4d17e4af2004aa49cdf099a8ae059bed 608 Gene3D G3DSA:3.60.21.10 45 399 2.4E-56 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like AMIS_7110 4d17e4af2004aa49cdf099a8ae059bed 608 Pfam PF02872 5'-nucleotidase, C-terminal domain 411 570 3.3E-40 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMIS_7110 4d17e4af2004aa49cdf099a8ae059bed 608 SUPERFAMILY SSF56300 53 401 1.99E-61 T 14-10-2018 AMIS_7110 4d17e4af2004aa49cdf099a8ae059bed 608 Gene3D G3DSA:3.90.780.10 410 604 1.6E-53 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMIS_7110 4d17e4af2004aa49cdf099a8ae059bed 608 Pfam PF00149 Calcineurin-like phosphoesterase 55 308 2.1E-4 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AMIS_7110 4d17e4af2004aa49cdf099a8ae059bed 608 PRINTS PR01607 Apyrase family signature 470 493 8.9E-17 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMIS_7110 4d17e4af2004aa49cdf099a8ae059bed 608 PRINTS PR01607 Apyrase family signature 322 342 8.9E-17 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMIS_7110 4d17e4af2004aa49cdf099a8ae059bed 608 PRINTS PR01607 Apyrase family signature 50 68 8.9E-17 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMIS_7110 4d17e4af2004aa49cdf099a8ae059bed 608 PRINTS PR01607 Apyrase family signature 291 314 8.9E-17 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMIS_7110 4d17e4af2004aa49cdf099a8ae059bed 608 PRINTS PR01607 Apyrase family signature 545 564 8.9E-17 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMIS_7110 4d17e4af2004aa49cdf099a8ae059bed 608 SUPERFAMILY SSF55816 404 606 1.83E-50 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMIS_45470 cfb00a42a66da370dcf444d96d845d81 283 Pfam PF01026 TatD related DNase 4 230 3.6E-12 T 14-10-2018 IPR001130 TatD family GO:0016788 AMIS_45470 cfb00a42a66da370dcf444d96d845d81 283 Gene3D G3DSA:3.20.20.140 2 263 3.5E-49 T 14-10-2018 AMIS_45470 cfb00a42a66da370dcf444d96d845d81 283 SUPERFAMILY SSF51556 2 256 3.19E-52 T 14-10-2018 IPR032466 Metal-dependent hydrolase AMIS_45470 cfb00a42a66da370dcf444d96d845d81 283 PIRSF PIRSF005295 2 259 1.8E-99 T 14-10-2018 IPR012022 Protein of unknown function UCP005295 AMIS_70860 3dbdbcf14315d3b412e44e5246cafdaf 369 PIRSF PIRSF001434 8 369 1.4E-98 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AMIS_70860 3dbdbcf14315d3b412e44e5246cafdaf 369 Gene3D G3DSA:3.40.640.10 6 244 2.5E-60 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_70860 3dbdbcf14315d3b412e44e5246cafdaf 369 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 44 365 9.7E-80 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AMIS_70860 3dbdbcf14315d3b412e44e5246cafdaf 369 SUPERFAMILY SSF53383 12 366 5.9E-78 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_70860 3dbdbcf14315d3b412e44e5246cafdaf 369 Gene3D G3DSA:3.90.1150.10 245 367 8.3E-28 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMIS_71860 fc6d14a934233c389b4fb3b7845b1f4d 429 Gene3D G3DSA:3.65.10.10 9 417 5.0E-151 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 AMIS_71860 fc6d14a934233c389b4fb3b7845b1f4d 429 SUPERFAMILY SSF55205 5 420 1.06E-124 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 AMIS_71860 fc6d14a934233c389b4fb3b7845b1f4d 429 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 5 419 2.4E-152 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMIS_71860 fc6d14a934233c389b4fb3b7845b1f4d 429 Gene3D G3DSA:3.65.10.10 24 234 5.0E-151 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 AMIS_71860 fc6d14a934233c389b4fb3b7845b1f4d 429 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 4 420 39.44 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMIS_71860 fc6d14a934233c389b4fb3b7845b1f4d 429 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 10 410 3.9E-93 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AMIS_28030 d6c54de525bdb9611c6d39773b30e6bb 303 Gene3D G3DSA:3.40.50.1980 178 303 8.0E-35 T 14-10-2018 AMIS_28030 d6c54de525bdb9611c6d39773b30e6bb 303 SUPERFAMILY SSF53807 24 302 1.08E-67 T 14-10-2018 AMIS_28030 d6c54de525bdb9611c6d39773b30e6bb 303 Gene3D G3DSA:3.40.50.1980 28 177 5.4E-34 T 14-10-2018 AMIS_28030 d6c54de525bdb9611c6d39773b30e6bb 303 PRINTS PR00691 Adhesin B signature 26 47 2.1E-21 T 14-10-2018 IPR006129 Adhesin B GO:0007155 AMIS_28030 d6c54de525bdb9611c6d39773b30e6bb 303 PRINTS PR00691 Adhesin B signature 184 201 2.1E-21 T 14-10-2018 IPR006129 Adhesin B GO:0007155 AMIS_28030 d6c54de525bdb9611c6d39773b30e6bb 303 PRINTS PR00691 Adhesin B signature 235 252 2.1E-21 T 14-10-2018 IPR006129 Adhesin B GO:0007155 AMIS_28030 d6c54de525bdb9611c6d39773b30e6bb 303 PRINTS PR00691 Adhesin B signature 70 89 2.1E-21 T 14-10-2018 IPR006129 Adhesin B GO:0007155 AMIS_28030 d6c54de525bdb9611c6d39773b30e6bb 303 PRINTS PR00691 Adhesin B signature 279 297 2.1E-21 T 14-10-2018 IPR006129 Adhesin B GO:0007155 AMIS_28030 d6c54de525bdb9611c6d39773b30e6bb 303 Pfam PF01297 Zinc-uptake complex component A periplasmic 29 296 7.1E-67 T 14-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 AMIS_28030 d6c54de525bdb9611c6d39773b30e6bb 303 PRINTS PR00690 Adhesin family signature 239 257 1.7E-25 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 AMIS_28030 d6c54de525bdb9611c6d39773b30e6bb 303 PRINTS PR00690 Adhesin family signature 26 44 1.7E-25 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 AMIS_28030 d6c54de525bdb9611c6d39773b30e6bb 303 PRINTS PR00690 Adhesin family signature 266 285 1.7E-25 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 AMIS_28030 d6c54de525bdb9611c6d39773b30e6bb 303 PRINTS PR00690 Adhesin family signature 70 87 1.7E-25 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 AMIS_28030 d6c54de525bdb9611c6d39773b30e6bb 303 PRINTS PR00690 Adhesin family signature 57 70 1.7E-25 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 AMIS_28030 d6c54de525bdb9611c6d39773b30e6bb 303 PRINTS PR00690 Adhesin family signature 184 205 1.7E-25 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 AMIS_46900 888e337a11b8df8617a6d326add67654 473 Gene3D G3DSA:2.115.10.20 53 351 1.5E-63 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMIS_46900 888e337a11b8df8617a6d326add67654 473 SUPERFAMILY SSF49785 352 468 9.23E-19 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_46900 888e337a11b8df8617a6d326add67654 473 SUPERFAMILY SSF75005 41 340 1.27E-58 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMIS_46900 888e337a11b8df8617a6d326add67654 473 Pfam PF04616 Glycosyl hydrolases family 43 55 341 1.9E-41 T 14-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 AMIS_46900 888e337a11b8df8617a6d326add67654 473 Gene3D G3DSA:2.60.120.260 352 473 2.1E-28 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_46900 888e337a11b8df8617a6d326add67654 473 Pfam PF16990 Carbohydrate binding module (family 35) 353 472 1.2E-10 T 14-10-2018 IPR005084 Carbohydrate binding module family 6 GO:0030246 AMIS_72360 80965e020e31e2756d36903439199800 516 PRINTS PR01036 Tetracycline resistance protein TetB signature 21 45 3.4E-11 T 14-10-2018 AMIS_72360 80965e020e31e2756d36903439199800 516 PRINTS PR01036 Tetracycline resistance protein TetB signature 142 166 3.4E-11 T 14-10-2018 AMIS_72360 80965e020e31e2756d36903439199800 516 PRINTS PR01036 Tetracycline resistance protein TetB signature 112 132 3.4E-11 T 14-10-2018 AMIS_72360 80965e020e31e2756d36903439199800 516 PRINTS PR01036 Tetracycline resistance protein TetB signature 408 427 3.4E-11 T 14-10-2018 AMIS_72360 80965e020e31e2756d36903439199800 516 Gene3D G3DSA:1.20.1720.10 19 228 5.6E-42 T 14-10-2018 AMIS_72360 80965e020e31e2756d36903439199800 516 Pfam PF07690 Major Facilitator Superfamily 22 417 3.0E-45 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_72360 80965e020e31e2756d36903439199800 516 SUPERFAMILY SSF103473 12 493 2.62E-63 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_11200 cb400d0944705780107893665835892b 167 SUPERFAMILY SSF55961 4 163 4.45E-27 T 14-10-2018 AMIS_11200 cb400d0944705780107893665835892b 167 Gene3D G3DSA:3.30.530.20 2 167 4.6E-27 T 14-10-2018 IPR023393 START-like domain superfamily AMIS_11200 cb400d0944705780107893665835892b 167 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 14 160 1.5E-17 T 14-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like AMIS_51770 05d4d0b62bb29a794965720725adea61 97 SUPERFAMILY SSF52091 11 90 5.1E-5 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_51770 05d4d0b62bb29a794965720725adea61 97 Gene3D G3DSA:3.30.750.24 2 96 1.5E-6 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_51770 05d4d0b62bb29a794965720725adea61 97 Pfam PF13466 STAS domain 13 85 8.7E-12 T 14-10-2018 IPR002645 STAS domain AMIS_54590 464d9457ae3bae24365611be83a7484d 184 Gene3D G3DSA:3.40.630.30 1 181 1.1E-46 T 14-10-2018 AMIS_54590 464d9457ae3bae24365611be83a7484d 184 SUPERFAMILY SSF55729 2 169 2.61E-44 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_54590 464d9457ae3bae24365611be83a7484d 184 Pfam PF13302 Acetyltransferase (GNAT) domain 5 145 7.8E-30 T 14-10-2018 IPR000182 GNAT domain AMIS_53350 f327d05c7afc65dc59e8e6cd29860623 451 Pfam PF05977 Transmembrane secretion effector 242 429 1.4E-11 T 14-10-2018 IPR010290 Transmembrane secretion effector AMIS_53350 f327d05c7afc65dc59e8e6cd29860623 451 Pfam PF05977 Transmembrane secretion effector 12 199 1.3E-19 T 14-10-2018 IPR010290 Transmembrane secretion effector AMIS_53350 f327d05c7afc65dc59e8e6cd29860623 451 SUPERFAMILY SSF103473 15 433 5.75E-42 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_76550 2fd4f90eeb4ab526ca970e076a5fb192 145 SMART SM00260 1 138 1.4E-28 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMIS_76550 2fd4f90eeb4ab526ca970e076a5fb192 145 Pfam PF01584 CheW-like domain 5 139 1.6E-28 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMIS_76550 2fd4f90eeb4ab526ca970e076a5fb192 145 Gene3D G3DSA:2.30.30.40 8 132 1.2E-31 T 14-10-2018 AMIS_76550 2fd4f90eeb4ab526ca970e076a5fb192 145 SUPERFAMILY SSF50341 2 139 5.49E-32 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 AMIS_76550 2fd4f90eeb4ab526ca970e076a5fb192 145 Gene3D G3DSA:2.40.50.180 24 133 1.2E-31 T 14-10-2018 AMIS_61420 9e409e0ed972b3d5a328f142dba70d79 1802 Gene3D G3DSA:3.20.20.80 42 512 1.2E-102 T 14-10-2018 AMIS_61420 9e409e0ed972b3d5a328f142dba70d79 1802 SUPERFAMILY SSF51445 52 519 1.59E-86 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_61420 9e409e0ed972b3d5a328f142dba70d79 1802 SMART SM00642 57 510 3.8E-90 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMIS_61420 9e409e0ed972b3d5a328f142dba70d79 1802 SUPERFAMILY SSF81296 928 1058 2.52E-24 T 14-10-2018 IPR014756 Immunoglobulin E-set AMIS_61420 9e409e0ed972b3d5a328f142dba70d79 1802 Gene3D G3DSA:2.60.40.1180 1732 1802 4.5E-28 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta AMIS_61420 9e409e0ed972b3d5a328f142dba70d79 1802 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 1071 1144 2.3E-6 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 AMIS_61420 9e409e0ed972b3d5a328f142dba70d79 1802 Gene3D G3DSA:3.20.20.80 1159 1731 6.8E-215 T 14-10-2018 AMIS_61420 9e409e0ed972b3d5a328f142dba70d79 1802 Pfam PF03714 Bacterial pullanase-associated domain 825 915 9.6E-19 T 14-10-2018 IPR005323 Pullulanase, carbohydrate-binding module 41 GO:0005975|GO:0030246 AMIS_61420 9e409e0ed972b3d5a328f142dba70d79 1802 Pfam PF03714 Bacterial pullanase-associated domain 711 806 5.7E-21 T 14-10-2018 IPR005323 Pullulanase, carbohydrate-binding module 41 GO:0005975|GO:0030246 AMIS_61420 9e409e0ed972b3d5a328f142dba70d79 1802 Gene3D G3DSA:2.60.40.1180 513 599 2.3E-12 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta AMIS_61420 9e409e0ed972b3d5a328f142dba70d79 1802 Gene3D G3DSA:2.60.40.1110 703 808 9.0E-27 T 14-10-2018 AMIS_61420 9e409e0ed972b3d5a328f142dba70d79 1802 Pfam PF00128 Alpha amylase, catalytic domain 95 458 5.1E-80 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMIS_61420 9e409e0ed972b3d5a328f142dba70d79 1802 Gene3D G3DSA:2.60.40.10 1062 1157 9.6E-18 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_61420 9e409e0ed972b3d5a328f142dba70d79 1802 TIGRFAM TIGR02103 pullul_strch: alpha-1,6-glucosidases, pullulanase-type 931 1801 0.0 T 14-10-2018 IPR011839 Alpha-1,6-glucosidases, pullulanase-type GO:0005975|GO:0051060 AMIS_61420 9e409e0ed972b3d5a328f142dba70d79 1802 SUPERFAMILY SSF51445 1174 1698 5.58E-115 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_61420 9e409e0ed972b3d5a328f142dba70d79 1802 SUPERFAMILY SSF49452 709 811 2.62E-29 T 14-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 AMIS_61420 9e409e0ed972b3d5a328f142dba70d79 1802 Gene3D G3DSA:2.60.40.1110 809 916 2.7E-27 T 14-10-2018 AMIS_61420 9e409e0ed972b3d5a328f142dba70d79 1802 SUPERFAMILY SSF51011 1702 1801 4.32E-28 T 14-10-2018 AMIS_61420 9e409e0ed972b3d5a328f142dba70d79 1802 Pfam PF11852 Domain of unknown function (DUF3372) 1641 1801 1.8E-57 T 14-10-2018 IPR024561 Alpha-1,6-glucosidases, pullulanase-type, C-terminal AMIS_61420 9e409e0ed972b3d5a328f142dba70d79 1802 Gene3D G3DSA:2.60.40.1130 932 1057 5.1E-29 T 14-10-2018 AMIS_61420 9e409e0ed972b3d5a328f142dba70d79 1802 SUPERFAMILY SSF49452 811 915 6.54E-31 T 14-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 AMIS_61420 9e409e0ed972b3d5a328f142dba70d79 1802 SUPERFAMILY SSF81296 1071 1161 1.9E-13 T 14-10-2018 IPR014756 Immunoglobulin E-set AMIS_61420 9e409e0ed972b3d5a328f142dba70d79 1802 SUPERFAMILY SSF51011 524 597 1.22E-8 T 14-10-2018 AMIS_56110 3993ae4e5d0f33bfc88a1f33534262a5 448 Gene3D G3DSA:3.30.465.10 98 435 5.1E-91 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AMIS_56110 3993ae4e5d0f33bfc88a1f33534262a5 448 SUPERFAMILY SSF56176 2 197 2.48E-42 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AMIS_56110 3993ae4e5d0f33bfc88a1f33534262a5 448 ProSitePatterns PS00862 Oxygen oxidoreductases covalent FAD-binding site. 35 68 - T 14-10-2018 IPR006093 Oxygen oxidoreductase covalent FAD-binding site GO:0016491|GO:0055114 AMIS_56110 3993ae4e5d0f33bfc88a1f33534262a5 448 Pfam PF01565 FAD binding domain 35 166 5.5E-22 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AMIS_56110 3993ae4e5d0f33bfc88a1f33534262a5 448 Gene3D G3DSA:3.40.462.20 198 407 5.1E-91 T 14-10-2018 AMIS_56110 3993ae4e5d0f33bfc88a1f33534262a5 448 Gene3D G3DSA:3.30.43.10 10 86 3.7E-17 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 AMIS_79170 b9d7b2d75bcd8077aebc76d4cc51ef02 362 Gene3D G3DSA:3.40.640.10 6 253 1.5E-58 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_79170 b9d7b2d75bcd8077aebc76d4cc51ef02 362 Gene3D G3DSA:3.90.1150.10 257 357 1.3E-6 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMIS_79170 b9d7b2d75bcd8077aebc76d4cc51ef02 362 SUPERFAMILY SSF53383 39 304 5.67E-58 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_79170 b9d7b2d75bcd8077aebc76d4cc51ef02 362 Pfam PF01212 Beta-eliminating lyase 37 287 6.1E-28 T 14-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 AMIS_210 59f7a4d12a72df2a5c643bb5c0f642d0 299 Gene3D G3DSA:3.40.250.10 4 155 2.1E-43 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily AMIS_210 59f7a4d12a72df2a5c643bb5c0f642d0 299 ProSitePatterns PS00380 Rhodanese signature 1. 47 58 - T 14-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 AMIS_210 59f7a4d12a72df2a5c643bb5c0f642d0 299 SMART SM00450 160 287 9.4E-20 T 14-10-2018 IPR001763 Rhodanese-like domain AMIS_210 59f7a4d12a72df2a5c643bb5c0f642d0 299 SMART SM00450 21 135 5.9E-19 T 14-10-2018 IPR001763 Rhodanese-like domain AMIS_210 59f7a4d12a72df2a5c643bb5c0f642d0 299 ProSitePatterns PS00683 Rhodanese C-terminal signature. 271 281 - T 14-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 AMIS_210 59f7a4d12a72df2a5c643bb5c0f642d0 299 Gene3D G3DSA:3.40.250.10 156 298 9.3E-41 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily AMIS_210 59f7a4d12a72df2a5c643bb5c0f642d0 299 SUPERFAMILY SSF52821 14 153 4.19E-37 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily AMIS_210 59f7a4d12a72df2a5c643bb5c0f642d0 299 Pfam PF00581 Rhodanese-like domain 167 282 7.9E-18 T 14-10-2018 IPR001763 Rhodanese-like domain AMIS_210 59f7a4d12a72df2a5c643bb5c0f642d0 299 Pfam PF00581 Rhodanese-like domain 22 131 8.2E-14 T 14-10-2018 IPR001763 Rhodanese-like domain AMIS_210 59f7a4d12a72df2a5c643bb5c0f642d0 299 SUPERFAMILY SSF52821 163 292 1.96E-32 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily AMIS_39220 4269ffe12575f6a0fee2b32bbddfa5a6 706 Gene3D G3DSA:3.30.565.10 254 379 1.6E-20 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_39220 4269ffe12575f6a0fee2b32bbddfa5a6 706 SUPERFAMILY SSF55874 273 378 3.01E-9 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_39220 4269ffe12575f6a0fee2b32bbddfa5a6 706 Pfam PF07730 Histidine kinase 185 245 3.2E-12 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMIS_53190 7d15ea95a891d1fcd1118758cae91d6c 296 SUPERFAMILY SSF52540 21 239 1.11E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_53190 7d15ea95a891d1fcd1118758cae91d6c 296 Gene3D G3DSA:3.40.50.300 19 266 1.3E-70 T 14-10-2018 AMIS_53190 7d15ea95a891d1fcd1118758cae91d6c 296 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_53190 7d15ea95a891d1fcd1118758cae91d6c 296 SMART SM00382 49 235 1.7E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_53190 7d15ea95a891d1fcd1118758cae91d6c 296 Pfam PF00005 ABC transporter 40 186 2.4E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_39440 4f1a1edf7e0c06dae01ec8e1f5eb8e57 495 SMART SM00267 317 480 3.5E-58 T 14-10-2018 IPR000160 GGDEF domain AMIS_39440 4f1a1edf7e0c06dae01ec8e1f5eb8e57 495 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 324 478 5.5E-35 T 14-10-2018 IPR000160 GGDEF domain AMIS_39440 4f1a1edf7e0c06dae01ec8e1f5eb8e57 495 Gene3D G3DSA:3.30.70.270 315 481 3.8E-47 T 14-10-2018 AMIS_39440 4f1a1edf7e0c06dae01ec8e1f5eb8e57 495 Pfam PF00990 Diguanylate cyclase, GGDEF domain 328 474 2.6E-38 T 14-10-2018 IPR000160 GGDEF domain AMIS_39440 4f1a1edf7e0c06dae01ec8e1f5eb8e57 495 SUPERFAMILY SSF55073 333 480 1.02E-40 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_32220 b5b38212ec372fcd97fa3080d7fac106 295 Hamap MF_01482 Mycothiol S-conjugate amidase [mca]. 13 291 49.546 T 14-10-2018 IPR017811 Mycothiol S-conjugate amidase Mca GO:0010126 AMIS_32220 b5b38212ec372fcd97fa3080d7fac106 295 Gene3D G3DSA:3.40.50.10320 7 294 5.3E-73 T 14-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 AMIS_32220 b5b38212ec372fcd97fa3080d7fac106 295 TIGRFAM TIGR03446 mycothiol_Mca: mycothiol conjugate amidase Mca 10 290 6.2E-130 T 14-10-2018 IPR017811 Mycothiol S-conjugate amidase Mca GO:0010126 AMIS_32220 b5b38212ec372fcd97fa3080d7fac106 295 Pfam PF02585 GlcNAc-PI de-N-acetylase 13 158 7.0E-25 T 14-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 AMIS_32220 b5b38212ec372fcd97fa3080d7fac106 295 SUPERFAMILY SSF102588 9 290 4.97E-67 T 14-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 AMIS_34200 aef83eba12712d429d861cc8202f6fdb 126 Gene3D G3DSA:3.30.750.24 7 120 7.5E-16 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_34200 aef83eba12712d429d861cc8202f6fdb 126 SUPERFAMILY SSF52091 12 99 1.35E-12 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_34200 aef83eba12712d429d861cc8202f6fdb 126 Pfam PF13466 STAS domain 18 98 8.6E-13 T 14-10-2018 IPR002645 STAS domain AMIS_1650 22a86c4a8e63bfc0020471b03765c451 161 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 13 135 1.2E-37 T 14-10-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L AMIS_1650 22a86c4a8e63bfc0020471b03765c451 161 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 23 36 - T 14-10-2018 IPR019823 Large-conductance mechanosensitive channel, conserved site AMIS_1650 22a86c4a8e63bfc0020471b03765c451 161 SUPERFAMILY SSF81330 22 132 1.57E-26 T 14-10-2018 IPR036019 Gated mechanosensitive channel AMIS_1650 22a86c4a8e63bfc0020471b03765c451 161 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 13 137 20.602 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 AMIS_1650 22a86c4a8e63bfc0020471b03765c451 161 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 13 135 1.1E-29 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 AMIS_1650 22a86c4a8e63bfc0020471b03765c451 161 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 16 30 6.5E-7 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 AMIS_1650 22a86c4a8e63bfc0020471b03765c451 161 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 87 95 6.5E-7 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 AMIS_1650 22a86c4a8e63bfc0020471b03765c451 161 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 97 106 6.5E-7 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 AMIS_1650 22a86c4a8e63bfc0020471b03765c451 161 Gene3D G3DSA:1.10.1200.120 13 138 1.0E-37 T 14-10-2018 IPR036019 Gated mechanosensitive channel AMIS_40420 578afe14bdd457f7d6860c3f7501038f 452 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 40 287 9.2E-37 T 14-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 AMIS_40420 578afe14bdd457f7d6860c3f7501038f 452 Gene3D G3DSA:3.20.20.80 18 329 1.3E-89 T 14-10-2018 AMIS_40420 578afe14bdd457f7d6860c3f7501038f 452 SUPERFAMILY SSF51445 31 327 7.55E-79 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_40420 578afe14bdd457f7d6860c3f7501038f 452 Gene3D G3DSA:2.60.40.290 351 452 2.8E-29 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 AMIS_40420 578afe14bdd457f7d6860c3f7501038f 452 SMART SM00637 357 451 2.5E-36 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 AMIS_40420 578afe14bdd457f7d6860c3f7501038f 452 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 150 159 - T 14-10-2018 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 AMIS_40420 578afe14bdd457f7d6860c3f7501038f 452 Pfam PF00553 Cellulose binding domain 357 447 2.6E-24 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 AMIS_40420 578afe14bdd457f7d6860c3f7501038f 452 SUPERFAMILY SSF49384 352 448 4.67E-28 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 AMIS_72910 d7bbdab6444a8296e50524a98d0a3aaa 84 Pfam PF02467 Transcription factor WhiB 3 70 3.7E-26 T 14-10-2018 IPR034768 WhiB-like iron-sulfur binding domain AMIS_72910 d7bbdab6444a8296e50524a98d0a3aaa 84 Hamap MF_01479 Transcriptional regulator WhiB [whiB]. 1 76 18.309 T 14-10-2018 IPR003482 Transcription factor WhiB AMIS_31530 bce858b10a015eb8d03b7f59744aa092 286 SMART SM00530 9 81 3.2E-9 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMIS_31530 bce858b10a015eb8d03b7f59744aa092 286 Gene3D G3DSA:1.10.260.40 27 83 1.6E-7 T 14-10-2018 AMIS_31530 bce858b10a015eb8d03b7f59744aa092 286 Gene3D G3DSA:3.30.450.180 105 268 4.8E-11 T 14-10-2018 AMIS_31530 bce858b10a015eb8d03b7f59744aa092 286 SUPERFAMILY SSF47413 28 80 1.07E-9 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_31530 bce858b10a015eb8d03b7f59744aa092 286 Pfam PF13560 Helix-turn-helix domain 7 84 6.4E-16 T 14-10-2018 AMIS_71370 0749325bf6659fc6d99636b713d459d2 99 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 4 96 1.3E-22 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 AMIS_71370 0749325bf6659fc6d99636b713d459d2 99 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 20 91 1.9E-14 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 AMIS_71370 0749325bf6659fc6d99636b713d459d2 99 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 3 96 22.603 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 AMIS_71370 0749325bf6659fc6d99636b713d459d2 99 SUPERFAMILY SSF141000 4 94 3.53E-26 T 14-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 AMIS_71370 0749325bf6659fc6d99636b713d459d2 99 Gene3D G3DSA:1.10.20.60 1 94 2.0E-22 T 14-10-2018 AMIS_77940 445264a9482ac69c084cfd957efb0a81 371 Pfam PF01551 Peptidase family M23 239 346 4.4E-24 T 14-10-2018 IPR016047 Peptidase M23 AMIS_77940 445264a9482ac69c084cfd957efb0a81 371 Gene3D G3DSA:2.70.70.10 209 369 5.0E-37 T 14-10-2018 IPR011055 Duplicated hybrid motif AMIS_77940 445264a9482ac69c084cfd957efb0a81 371 SUPERFAMILY SSF51261 216 359 2.72E-33 T 14-10-2018 IPR011055 Duplicated hybrid motif AMIS_80040 0095774f7274df5648a2ef3152737bfb 320 Gene3D G3DSA:3.40.50.720 116 257 4.8E-107 T 14-10-2018 AMIS_80040 0095774f7274df5648a2ef3152737bfb 320 SMART SM00829 7 318 8.9E-51 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMIS_80040 0095774f7274df5648a2ef3152737bfb 320 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 1 319 2.2E-130 T 14-10-2018 IPR014189 Quinone oxidoreductase PIG3 Reactome: R-HSA-6803205 AMIS_80040 0095774f7274df5648a2ef3152737bfb 320 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 24 83 3.6E-7 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMIS_80040 0095774f7274df5648a2ef3152737bfb 320 SUPERFAMILY SSF50129 1 135 4.11E-37 T 14-10-2018 IPR011032 GroES-like superfamily AMIS_80040 0095774f7274df5648a2ef3152737bfb 320 Gene3D G3DSA:3.90.180.10 10 318 4.8E-107 T 14-10-2018 AMIS_80040 0095774f7274df5648a2ef3152737bfb 320 SUPERFAMILY SSF51735 107 282 5.11E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_80040 0095774f7274df5648a2ef3152737bfb 320 Pfam PF13602 Zinc-binding dehydrogenase 178 318 1.5E-25 T 14-10-2018 AMIS_79260 2e540ba84b1432b9330c632a75d5b5e4 261 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 14 233 2.5E-28 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AMIS_79260 2e540ba84b1432b9330c632a75d5b5e4 261 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 55 68 7.1E-9 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AMIS_79260 2e540ba84b1432b9330c632a75d5b5e4 261 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 178 190 7.1E-9 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AMIS_79260 2e540ba84b1432b9330c632a75d5b5e4 261 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 35 49 7.1E-9 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AMIS_79260 2e540ba84b1432b9330c632a75d5b5e4 261 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 14 30 7.1E-9 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AMIS_79260 2e540ba84b1432b9330c632a75d5b5e4 261 Gene3D G3DSA:3.40.50.150 12 232 6.1E-31 T 14-10-2018 AMIS_79260 2e540ba84b1432b9330c632a75d5b5e4 261 SUPERFAMILY SSF53335 11 243 3.53E-39 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_79260 2e540ba84b1432b9330c632a75d5b5e4 261 Gene3D G3DSA:1.10.1020.10 62 158 6.1E-31 T 14-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 AMIS_79260 2e540ba84b1432b9330c632a75d5b5e4 261 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 181 187 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AMIS_79260 2e540ba84b1432b9330c632a75d5b5e4 261 PIRSF PIRSF000398 5 261 6.0E-45 T 14-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 AMIS_75840 9e6b698657fc385be1ef6b62a9cbb479 244 Gene3D G3DSA:1.10.150.240 18 84 1.4E-18 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AMIS_75840 9e6b698657fc385be1ef6b62a9cbb479 244 SUPERFAMILY SSF56784 4 196 6.2E-22 T 14-10-2018 IPR036412 HAD-like superfamily AMIS_75840 9e6b698657fc385be1ef6b62a9cbb479 244 Gene3D G3DSA:3.40.50.1000 7 196 1.4E-18 T 14-10-2018 IPR023214 HAD superfamily AMIS_75840 9e6b698657fc385be1ef6b62a9cbb479 244 Pfam PF00702 haloacid dehalogenase-like hydrolase 4 176 1.3E-8 T 14-10-2018 AMIS_36020 f8359d2e7bde220dffbec8fd3f35613a 159 SUPERFAMILY SSF51182 5 134 6.68E-25 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily AMIS_36020 f8359d2e7bde220dffbec8fd3f35613a 159 Pfam PF07883 Cupin domain 62 121 6.3E-14 T 14-10-2018 IPR013096 Cupin 2, conserved barrel AMIS_36020 f8359d2e7bde220dffbec8fd3f35613a 159 Gene3D G3DSA:2.60.120.10 8 155 2.2E-28 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMIS_48950 31aa95801e5355d11d70935810927f63 94 Gene3D G3DSA:1.10.287.1060 4 91 5.3E-7 T 14-10-2018 AMIS_48950 31aa95801e5355d11d70935810927f63 94 SUPERFAMILY SSF140453 22 89 3.01E-5 T 14-10-2018 IPR036689 ESAT-6-like superfamily AMIS_30830 44a2c319323bf14abe6c0485346b59a0 239 Gene3D G3DSA:3.40.50.1820 2 237 2.7E-46 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_30830 44a2c319323bf14abe6c0485346b59a0 239 SUPERFAMILY SSF53474 2 238 3.6E-34 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_30830 44a2c319323bf14abe6c0485346b59a0 239 Pfam PF12146 Serine aminopeptidase, S33 18 146 2.8E-11 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 AMIS_8390 734f4de3835b55085e28f38aa86c26e2 144 Pfam PF01638 HxlR-like helix-turn-helix 30 117 3.9E-29 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type AMIS_8390 734f4de3835b55085e28f38aa86c26e2 144 Gene3D G3DSA:1.10.10.10 4 129 7.9E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_8390 734f4de3835b55085e28f38aa86c26e2 144 SUPERFAMILY SSF46785 24 123 8.19E-30 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_45530 f2c69adfecfc1443e64f1e7ec959af81 375 Gene3D G3DSA:1.10.1740.10 2 64 2.0E-7 T 14-10-2018 AMIS_45530 f2c69adfecfc1443e64f1e7ec959af81 375 Pfam PF04542 Sigma-70 region 2 4 65 1.1E-9 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_45530 f2c69adfecfc1443e64f1e7ec959af81 375 SUPERFAMILY SSF88946 3 81 8.24E-12 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_45530 f2c69adfecfc1443e64f1e7ec959af81 375 SUPERFAMILY SSF88659 90 146 1.85E-8 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_45530 f2c69adfecfc1443e64f1e7ec959af81 375 Pfam PF08281 Sigma-70, region 4 94 145 1.1E-7 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_45530 f2c69adfecfc1443e64f1e7ec959af81 375 Gene3D G3DSA:1.10.10.10 99 148 1.4E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_75050 81015d2c2fdf07fbb7a144102b58468e 200 ProSitePatterns PS01081 TetR-type HTH domain signature. 22 52 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMIS_75050 81015d2c2fdf07fbb7a144102b58468e 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 54 8.9E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_75050 81015d2c2fdf07fbb7a144102b58468e 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 10 23 8.9E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_75050 81015d2c2fdf07fbb7a144102b58468e 200 Gene3D G3DSA:1.10.357.10 1 193 8.1E-49 T 14-10-2018 AMIS_75050 81015d2c2fdf07fbb7a144102b58468e 200 SUPERFAMILY SSF48498 77 187 2.34E-8 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_75050 81015d2c2fdf07fbb7a144102b58468e 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 54 1.5E-16 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_75050 81015d2c2fdf07fbb7a144102b58468e 200 SUPERFAMILY SSF46689 2 76 4.59E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_4170 ce167f985b2b33f9fea45ac850118ec5 241 Pfam PF02348 Cytidylyltransferase 5 180 5.4E-30 T 14-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 AMIS_4170 ce167f985b2b33f9fea45ac850118ec5 241 Gene3D G3DSA:3.90.550.10 2 209 1.5E-34 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_4170 ce167f985b2b33f9fea45ac850118ec5 241 SUPERFAMILY SSF53448 1 202 3.75E-25 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_80220 43fe71e74186a8dd6dc89511373daf51 529 Pfam PF13727 CoA-binding domain 124 299 9.0E-10 T 14-10-2018 AMIS_80220 43fe71e74186a8dd6dc89511373daf51 529 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 69 529 8.2E-121 T 14-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase AMIS_80220 43fe71e74186a8dd6dc89511373daf51 529 Gene3D G3DSA:3.40.50.720 201 323 1.7E-5 T 14-10-2018 AMIS_80220 43fe71e74186a8dd6dc89511373daf51 529 Pfam PF02397 Bacterial sugar transferase 337 523 9.7E-66 T 14-10-2018 IPR003362 Bacterial sugar transferase AMIS_63830 fd1564bb4a84b573609a654415e4016f 761 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 286 378 6.5E-32 T 14-10-2018 IPR000160 GGDEF domain AMIS_63830 fd1564bb4a84b573609a654415e4016f 761 SUPERFAMILY SSF55073 295 379 8.11E-30 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_63830 fd1564bb4a84b573609a654415e4016f 761 Pfam PF00990 Diguanylate cyclase, GGDEF domain 290 379 1.6E-33 T 14-10-2018 IPR000160 GGDEF domain AMIS_63830 fd1564bb4a84b573609a654415e4016f 761 Pfam PF00990 Diguanylate cyclase, GGDEF domain 432 493 3.2E-7 T 14-10-2018 IPR000160 GGDEF domain AMIS_63830 fd1564bb4a84b573609a654415e4016f 761 Pfam PF00563 EAL domain 529 754 5.1E-60 T 14-10-2018 IPR001633 EAL domain AMIS_63830 fd1564bb4a84b573609a654415e4016f 761 Gene3D G3DSA:3.20.20.450 510 761 3.0E-76 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_63830 fd1564bb4a84b573609a654415e4016f 761 SUPERFAMILY SSF141868 529 759 2.09E-66 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_63830 fd1564bb4a84b573609a654415e4016f 761 SMART SM00267 279 499 6.1E-45 T 14-10-2018 IPR000160 GGDEF domain AMIS_63830 fd1564bb4a84b573609a654415e4016f 761 SUPERFAMILY SSF55073 429 500 3.61E-11 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_63830 fd1564bb4a84b573609a654415e4016f 761 SMART SM00052 507 759 2.8E-72 T 14-10-2018 IPR001633 EAL domain AMIS_44200 ff12693e8ad213c0b9d796e74dbdff0e 444 SUPERFAMILY SSF53850 56 432 9.24E-73 T 14-10-2018 AMIS_44200 ff12693e8ad213c0b9d796e74dbdff0e 444 Pfam PF13416 Bacterial extracellular solute-binding protein 73 379 1.8E-37 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein AMIS_44200 ff12693e8ad213c0b9d796e74dbdff0e 444 Gene3D G3DSA:3.40.190.10 52 442 8.2E-85 T 14-10-2018 AMIS_35080 879a97c8280e3e035bd2b8dc32dcbd19 197 SUPERFAMILY SSF54909 2 97 2.84E-17 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel AMIS_35080 879a97c8280e3e035bd2b8dc32dcbd19 197 Pfam PF07978 NIPSNAP 3 97 6.4E-14 T 14-10-2018 IPR012577 NIPSNAP AMIS_35080 879a97c8280e3e035bd2b8dc32dcbd19 197 Gene3D G3DSA:3.30.70.100 1 103 3.3E-13 T 14-10-2018 AMIS_10850 a26ee40f12656c3af2f4dda5be28dfc1 714 Gene3D G3DSA:1.10.3810.10 65 274 8.6E-70 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMIS_10850 a26ee40f12656c3af2f4dda5be28dfc1 714 Pfam PF00905 Penicillin binding protein transpeptidase domain 364 663 6.4E-26 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AMIS_10850 a26ee40f12656c3af2f4dda5be28dfc1 714 SUPERFAMILY SSF56601 242 710 8.18E-75 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMIS_10850 a26ee40f12656c3af2f4dda5be28dfc1 714 Pfam PF00912 Transglycosylase 76 258 1.1E-59 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMIS_10850 a26ee40f12656c3af2f4dda5be28dfc1 714 SUPERFAMILY SSF53955 60 284 3.37E-68 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily AMIS_10850 a26ee40f12656c3af2f4dda5be28dfc1 714 Gene3D G3DSA:3.40.710.10 315 712 1.9E-74 T 14-10-2018 AMIS_65740 c5c7c795f2a19c8bbfefaa24eb09432a 162 Gene3D G3DSA:1.20.1260.100 12 162 1.2E-45 T 14-10-2018 IPR038330 TspO/MBR-related superfamily AMIS_65740 c5c7c795f2a19c8bbfefaa24eb09432a 162 Pfam PF03073 TspO/MBR family 23 159 1.3E-44 T 14-10-2018 IPR004307 TspO/MBR-related protein GO:0016021 AMIS_65740 c5c7c795f2a19c8bbfefaa24eb09432a 162 PIRSF PIRSF005859 10 162 9.4E-44 T 14-10-2018 IPR004307 TspO/MBR-related protein GO:0016021 AMIS_49820 ce8ecb25bb3bd657de8a4048bec091c2 660 Gene3D G3DSA:3.30.450.40 376 457 5.1E-7 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_49820 ce8ecb25bb3bd657de8a4048bec091c2 660 Pfam PF07730 Histidine kinase 466 529 1.7E-6 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMIS_49820 ce8ecb25bb3bd657de8a4048bec091c2 660 Gene3D G3DSA:3.30.565.10 530 657 2.2E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_49820 ce8ecb25bb3bd657de8a4048bec091c2 660 SMART SM00387 565 659 4.5E-9 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_49820 ce8ecb25bb3bd657de8a4048bec091c2 660 SUPERFAMILY SSF55781 390 454 4.91E-7 T 14-10-2018 AMIS_49820 ce8ecb25bb3bd657de8a4048bec091c2 660 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 567 656 4.7E-6 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_49820 ce8ecb25bb3bd657de8a4048bec091c2 660 SUPERFAMILY SSF55874 542 657 3.64E-17 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_27450 124efa7f0895202facc4c5fce4b907cb 240 Gene3D G3DSA:3.40.50.300 1 233 5.6E-54 T 14-10-2018 AMIS_27450 124efa7f0895202facc4c5fce4b907cb 240 ProSitePatterns PS00211 ABC transporters family signature. 128 142 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_27450 124efa7f0895202facc4c5fce4b907cb 240 SUPERFAMILY SSF52540 2 219 3.04E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_27450 124efa7f0895202facc4c5fce4b907cb 240 SMART SM00382 26 204 1.2E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_27450 124efa7f0895202facc4c5fce4b907cb 240 Pfam PF00005 ABC transporter 19 156 6.3E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_38640 82e5725b7c6cf2fac03c13cdc07010b1 104 SUPERFAMILY SSF46458 3 103 2.0E-23 T 14-10-2018 IPR009050 Globin-like superfamily AMIS_38640 82e5725b7c6cf2fac03c13cdc07010b1 104 Gene3D G3DSA:1.10.490.10 1 104 7.9E-28 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 AMIS_38640 82e5725b7c6cf2fac03c13cdc07010b1 104 Pfam PF01152 Bacterial-like globin 4 95 3.0E-9 T 14-10-2018 IPR001486 Truncated hemoglobin GO:0019825 AMIS_47930 5337519776ae54c4bbaad996cedbd2c1 206 Pfam PF13563 2'-5' RNA ligase superfamily 53 185 3.0E-6 T 14-10-2018 AMIS_47930 5337519776ae54c4bbaad996cedbd2c1 206 SUPERFAMILY SSF55144 30 205 4.19E-9 T 14-10-2018 IPR009097 Cyclic phosphodiesterase AMIS_47930 5337519776ae54c4bbaad996cedbd2c1 206 Gene3D G3DSA:3.90.1140.10 25 206 6.1E-11 T 14-10-2018 AMIS_50410 3fd1de356b2718db9dd2a559591e792d 95 SMART SM01294 17 83 7.5E-14 T 14-10-2018 AMIS_50410 3fd1de356b2718db9dd2a559591e792d 95 SUPERFAMILY SSF47336 12 92 2.09E-17 T 14-10-2018 IPR036736 ACP-like superfamily AMIS_50410 3fd1de356b2718db9dd2a559591e792d 95 SMART SM00823 Phosphopantetheine attachment site 16 87 1.3E-9 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AMIS_50410 3fd1de356b2718db9dd2a559591e792d 95 Gene3D G3DSA:1.10.1200.10 2 92 6.0E-23 T 14-10-2018 IPR036736 ACP-like superfamily AMIS_50410 3fd1de356b2718db9dd2a559591e792d 95 ProSitePatterns PS00012 Phosphopantetheine attachment site. 42 57 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site AMIS_50410 3fd1de356b2718db9dd2a559591e792d 95 Pfam PF00550 Phosphopantetheine attachment site 17 83 1.5E-13 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain AMIS_7220 70b56d6611dd241fc93c952a8fe027a0 302 Pfam PF04480 Protein of unknown function (DUF559) 228 291 3.2E-9 T 14-10-2018 IPR007569 Protein of unknown function DUF559 AMIS_7220 70b56d6611dd241fc93c952a8fe027a0 302 SUPERFAMILY SSF52980 186 294 3.22E-15 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AMIS_7220 70b56d6611dd241fc93c952a8fe027a0 302 Gene3D G3DSA:3.40.960.10 191 297 1.5E-17 T 14-10-2018 AMIS_62160 4c47e7bb81842db10566b15d63fb9668 420 ProSitePatterns PS00483 Dihydroorotase signature 2. 296 307 - T 14-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMIS_62160 4c47e7bb81842db10566b15d63fb9668 420 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 29 413 4.8E-128 T 14-10-2018 AMIS_62160 4c47e7bb81842db10566b15d63fb9668 420 SUPERFAMILY SSF51556 46 358 4.09E-100 T 14-10-2018 IPR032466 Metal-dependent hydrolase AMIS_62160 4c47e7bb81842db10566b15d63fb9668 420 Hamap MF_00220_B Dihydroorotase [pyrC]. 3 415 41.923 T 14-10-2018 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMIS_62160 4c47e7bb81842db10566b15d63fb9668 420 Gene3D G3DSA:3.20.20.140 47 357 2.8E-129 T 14-10-2018 AMIS_62160 4c47e7bb81842db10566b15d63fb9668 420 Gene3D G3DSA:2.30.40.10 15 410 2.8E-129 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMIS_62160 4c47e7bb81842db10566b15d63fb9668 420 SUPERFAMILY SSF51338 12 418 7.26E-21 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMIS_62160 4c47e7bb81842db10566b15d63fb9668 420 Pfam PF01979 Amidohydrolase family 43 410 2.3E-22 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AMIS_46220 f2750e8d24e25388b73c0af690628ad4 333 Pfam PF09084 NMT1/THI5 like 48 267 2.0E-17 T 14-10-2018 IPR015168 SsuA/THI5-like AMIS_46220 f2750e8d24e25388b73c0af690628ad4 333 SUPERFAMILY SSF53850 46 274 2.95E-26 T 14-10-2018 AMIS_46220 f2750e8d24e25388b73c0af690628ad4 333 Gene3D G3DSA:3.40.190.10 51 291 1.3E-36 T 14-10-2018 AMIS_46220 f2750e8d24e25388b73c0af690628ad4 333 Gene3D G3DSA:3.40.190.10 116 229 1.3E-36 T 14-10-2018 AMIS_67620 0bda0f101185664f172d32d1d332421d 597 Pfam PF00989 PAS fold 305 416 1.0E-12 T 14-10-2018 IPR013767 PAS fold GO:0006355 AMIS_67620 0bda0f101185664f172d32d1d332421d 597 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 303 426 1.6E-18 T 14-10-2018 IPR000014 PAS domain AMIS_67620 0bda0f101185664f172d32d1d332421d 597 SMART SM00267 419 585 4.6E-61 T 14-10-2018 IPR000160 GGDEF domain AMIS_67620 0bda0f101185664f172d32d1d332421d 597 SUPERFAMILY SSF55785 295 417 7.26E-21 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_67620 0bda0f101185664f172d32d1d332421d 597 Pfam PF00990 Diguanylate cyclase, GGDEF domain 430 580 3.9E-44 T 14-10-2018 IPR000160 GGDEF domain AMIS_67620 0bda0f101185664f172d32d1d332421d 597 Gene3D G3DSA:3.30.70.270 423 584 1.4E-53 T 14-10-2018 AMIS_67620 0bda0f101185664f172d32d1d332421d 597 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 426 581 4.0E-39 T 14-10-2018 IPR000160 GGDEF domain AMIS_67620 0bda0f101185664f172d32d1d332421d 597 SUPERFAMILY SSF55073 435 581 2.62E-45 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_67620 0bda0f101185664f172d32d1d332421d 597 Gene3D G3DSA:3.30.450.20 294 416 2.6E-19 T 14-10-2018 AMIS_67620 0bda0f101185664f172d32d1d332421d 597 SMART SM00091 305 371 6.6E-14 T 14-10-2018 IPR000014 PAS domain AMIS_14420 fb7784c872924be82da050382f29aeba 316 ProSitePatterns PS01125 ROK family signature. 133 160 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AMIS_14420 fb7784c872924be82da050382f29aeba 316 SUPERFAMILY SSF53067 4 315 3.14E-61 T 14-10-2018 AMIS_14420 fb7784c872924be82da050382f29aeba 316 Gene3D G3DSA:3.30.420.40 5 310 5.2E-99 T 14-10-2018 AMIS_14420 fb7784c872924be82da050382f29aeba 316 Pfam PF00480 ROK family 4 315 4.9E-79 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AMIS_14420 fb7784c872924be82da050382f29aeba 316 Gene3D G3DSA:3.30.420.40 124 297 5.2E-99 T 14-10-2018 AMIS_14420 fb7784c872924be82da050382f29aeba 316 TIGRFAM TIGR00744 ROK_glcA_fam: ROK family protein (putative glucokinase) 5 314 1.7E-90 T 14-10-2018 IPR004654 Glucokinase ROK GO:0004340|GO:0005737|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 AMIS_36920 0f99b2a48810060a1768b1b824e2ccc1 112 Pfam PF05899 Protein of unknown function (DUF861) 42 108 5.6E-13 T 14-10-2018 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 AMIS_36920 0f99b2a48810060a1768b1b824e2ccc1 112 SUPERFAMILY SSF51182 40 109 4.92E-11 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily AMIS_36920 0f99b2a48810060a1768b1b824e2ccc1 112 Gene3D G3DSA:2.60.120.10 6 111 2.6E-26 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMIS_37470 f6ffdad3afe67779ba09849f2927d6c9 383 Pfam PF06134 L-rhamnose isomerase (RhaA) 86 331 2.0E-8 T 14-10-2018 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14 AMIS_37470 f6ffdad3afe67779ba09849f2927d6c9 383 TIGRFAM TIGR02635 RhaI_grampos: L-rhamnose isomerase 6 373 3.7E-178 T 14-10-2018 IPR013457 Rhamnose isomerase-related AMIS_37470 f6ffdad3afe67779ba09849f2927d6c9 383 SUPERFAMILY SSF51658 20 354 6.73E-86 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily AMIS_37470 f6ffdad3afe67779ba09849f2927d6c9 383 Gene3D G3DSA:3.20.20.150 3 375 7.9E-121 T 14-10-2018 AMIS_37470 f6ffdad3afe67779ba09849f2927d6c9 383 ProDom PD042532 ISOMERASE L-RHAMNOSE METAL-BINDING METABOLISM RHAMNOSE MANGANESE ENZYME KINASE 3D-STRUCTURE RHAA/RHAB 100 331 4.0E-7 T 14-10-2018 AMIS_59380 8d7554f8f3c4c5fa008057a1c7c8066f 520 Gene3D G3DSA:2.60.40.290 431 520 2.8E-19 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 AMIS_59380 8d7554f8f3c4c5fa008057a1c7c8066f 520 SUPERFAMILY SSF53474 122 372 1.83E-8 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_59380 8d7554f8f3c4c5fa008057a1c7c8066f 520 SUPERFAMILY SSF49384 432 517 4.19E-15 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 AMIS_59380 8d7554f8f3c4c5fa008057a1c7c8066f 520 SMART SM00637 434 517 1.8E-13 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 AMIS_59380 8d7554f8f3c4c5fa008057a1c7c8066f 520 Gene3D G3DSA:3.40.50.1820 29 403 7.1E-102 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_72090 4ab0d9d6bf029c64ab7a619874e6d9aa 448 Gene3D G3DSA:2.130.10.10 54 390 1.3E-25 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_72090 4ab0d9d6bf029c64ab7a619874e6d9aa 448 SUPERFAMILY SSF50998 68 374 2.98E-14 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AMIS_72090 4ab0d9d6bf029c64ab7a619874e6d9aa 448 Pfam PF13360 PQQ-like domain 144 290 1.4E-7 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat AMIS_27110 97b8bc7a726fab910dc3bca1cf222912 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMIS_27110 97b8bc7a726fab910dc3bca1cf222912 253 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 185 1.7E-6 T 14-10-2018 AMIS_27110 97b8bc7a726fab910dc3bca1cf222912 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 9.1E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_27110 97b8bc7a726fab910dc3bca1cf222912 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 9.1E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_27110 97b8bc7a726fab910dc3bca1cf222912 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 9.1E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_27110 97b8bc7a726fab910dc3bca1cf222912 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 9.1E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_27110 97b8bc7a726fab910dc3bca1cf222912 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 9.1E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_27110 97b8bc7a726fab910dc3bca1cf222912 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 9.1E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_27110 97b8bc7a726fab910dc3bca1cf222912 253 SUPERFAMILY SSF51735 6 250 2.95E-83 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_27110 97b8bc7a726fab910dc3bca1cf222912 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 250 3.2E-68 T 14-10-2018 AMIS_27110 97b8bc7a726fab910dc3bca1cf222912 253 Gene3D G3DSA:3.40.50.720 1 253 5.5E-85 T 14-10-2018 AMIS_27110 97b8bc7a726fab910dc3bca1cf222912 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 3.3E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_27110 97b8bc7a726fab910dc3bca1cf222912 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 3.3E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_27110 97b8bc7a726fab910dc3bca1cf222912 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 3.3E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_41600 062cabbb07e0c73a0d8b58f715a76d57 157 Pfam PF00652 Ricin-type beta-trefoil lectin domain 31 149 8.6E-20 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_41600 062cabbb07e0c73a0d8b58f715a76d57 157 SMART SM00458 21 152 6.0E-25 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_41600 062cabbb07e0c73a0d8b58f715a76d57 157 Gene3D G3DSA:2.80.10.50 22 154 3.3E-32 T 14-10-2018 AMIS_41600 062cabbb07e0c73a0d8b58f715a76d57 157 SUPERFAMILY SSF50370 21 152 2.17E-32 T 14-10-2018 IPR035992 Ricin B-like lectins AMIS_79630 d787905b73cfa2eb39b14e2c60a024aa 269 SUPERFAMILY SSF53474 35 264 1.66E-32 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_79630 d787905b73cfa2eb39b14e2c60a024aa 269 Gene3D G3DSA:3.40.50.1820 31 268 2.7E-47 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_79630 d787905b73cfa2eb39b14e2c60a024aa 269 Pfam PF12697 Alpha/beta hydrolase family 41 260 4.9E-19 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_56780 126dcf2270f5b66e7889180cff81bed5 415 Pfam PF04932 O-Antigen ligase 200 334 1.5E-11 T 14-10-2018 IPR007016 O-antigen ligase-related AMIS_16310 e384088b8f5d91a9d281191589f81bfe 151 TIGRFAM TIGR01994 SUF_scaf_2: SUF system FeS assembly protein, NifU family 3 135 8.7E-43 T 14-10-2018 AMIS_16310 e384088b8f5d91a9d281191589f81bfe 151 Gene3D G3DSA:3.90.1010.10 1 138 3.1E-42 T 14-10-2018 AMIS_16310 e384088b8f5d91a9d281191589f81bfe 151 Pfam PF01592 NifU-like N terminal domain 7 124 3.7E-22 T 14-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 AMIS_16310 e384088b8f5d91a9d281191589f81bfe 151 SUPERFAMILY SSF82649 1 135 3.92E-40 T 14-10-2018 AMIS_68930 d7097ebd68c5d3f27bd8204780503c75 265 Pfam PF01726 LexA DNA binding domain 59 121 2.4E-27 T 14-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 AMIS_68930 d7097ebd68c5d3f27bd8204780503c75 265 Gene3D G3DSA:2.10.109.10 150 265 5.8E-40 T 14-10-2018 AMIS_68930 d7097ebd68c5d3f27bd8204780503c75 265 Hamap MF_00015 LexA repressor [lexA]. 59 265 33.872 T 14-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 AMIS_68930 d7097ebd68c5d3f27bd8204780503c75 265 SUPERFAMILY SSF46785 59 124 2.23E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_68930 d7097ebd68c5d3f27bd8204780503c75 265 Pfam PF00717 Peptidase S24-like 184 248 4.0E-14 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AMIS_68930 d7097ebd68c5d3f27bd8204780503c75 265 Gene3D G3DSA:1.10.10.10 59 124 1.0E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_68930 d7097ebd68c5d3f27bd8204780503c75 265 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 192 203 3.8E-9 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AMIS_68930 d7097ebd68c5d3f27bd8204780503c75 265 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 181 191 3.8E-9 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AMIS_68930 d7097ebd68c5d3f27bd8204780503c75 265 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 220 232 3.8E-9 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AMIS_68930 d7097ebd68c5d3f27bd8204780503c75 265 SUPERFAMILY SSF51306 145 263 2.44E-35 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily AMIS_68930 d7097ebd68c5d3f27bd8204780503c75 265 TIGRFAM TIGR00498 lexA: repressor LexA 59 265 2.7E-75 T 14-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 AMIS_28890 86d545773d29459aaa639de7cd90d664 247 SUPERFAMILY SSF51735 16 230 4.26E-21 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_28890 86d545773d29459aaa639de7cd90d664 247 Pfam PF13460 NAD(P)H-binding 22 219 5.5E-19 T 14-10-2018 IPR016040 NAD(P)-binding domain AMIS_28890 86d545773d29459aaa639de7cd90d664 247 Gene3D G3DSA:3.40.50.720 6 233 1.2E-24 T 14-10-2018 AMIS_64280 5330801d7a9bc5916ed1320a61fe93f7 283 Gene3D G3DSA:1.10.1740.10 2 85 3.9E-20 T 14-10-2018 AMIS_64280 5330801d7a9bc5916ed1320a61fe93f7 283 SUPERFAMILY SSF88946 13 87 1.63E-18 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_64280 5330801d7a9bc5916ed1320a61fe93f7 283 Pfam PF04545 Sigma-70, region 4 181 228 9.4E-11 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 AMIS_64280 5330801d7a9bc5916ed1320a61fe93f7 283 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 13 228 6.0E-24 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_64280 5330801d7a9bc5916ed1320a61fe93f7 283 SUPERFAMILY SSF88659 89 155 5.67E-12 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_64280 5330801d7a9bc5916ed1320a61fe93f7 283 Pfam PF04542 Sigma-70 region 2 16 87 2.2E-9 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_64280 5330801d7a9bc5916ed1320a61fe93f7 283 SUPERFAMILY SSF88659 152 233 4.11E-16 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_64280 5330801d7a9bc5916ed1320a61fe93f7 283 Pfam PF04539 Sigma-70 region 3 100 167 2.3E-9 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 AMIS_64280 5330801d7a9bc5916ed1320a61fe93f7 283 Gene3D G3DSA:1.20.140.160 86 234 6.3E-36 T 14-10-2018 AMIS_64280 5330801d7a9bc5916ed1320a61fe93f7 283 PIRSF PIRSF000770 2 252 1.6E-56 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMIS_33600 274ca1fd63d260e2d582e1a65502a667 157 Pfam PF04978 Protein of unknown function (DUF664) 12 153 8.3E-45 T 14-10-2018 IPR007061 Protein of unknown function DUF664 AMIS_33600 274ca1fd63d260e2d582e1a65502a667 157 Gene3D G3DSA:1.20.120.450 4 154 2.5E-32 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes AMIS_33600 274ca1fd63d260e2d582e1a65502a667 157 SUPERFAMILY SSF109854 7 153 1.68E-36 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes AMIS_31280 e6f9d17454fab1726ed7928691340c2b 325 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 2 319 2.2E-89 T 14-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 AMIS_31280 e6f9d17454fab1726ed7928691340c2b 325 Pfam PF00296 Luciferase-like monooxygenase 8 296 2.4E-35 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMIS_31280 e6f9d17454fab1726ed7928691340c2b 325 SUPERFAMILY SSF51679 2 309 5.76E-57 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_31280 e6f9d17454fab1726ed7928691340c2b 325 Gene3D G3DSA:3.20.20.30 1 324 4.7E-75 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_61770 553cb373da72bac42ef618c18bcf7500 252 Gene3D G3DSA:3.40.50.10790 1 155 3.2E-5 T 14-10-2018 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal AMIS_61770 553cb373da72bac42ef618c18bcf7500 252 SUPERFAMILY SSF102522 3 146 5.1E-8 T 14-10-2018 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal AMIS_61770 553cb373da72bac42ef618c18bcf7500 252 Pfam PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase 4 220 5.7E-10 T 14-10-2018 IPR002747 SAM-dependent chlorinase/fluorinase AMIS_13730 bf0e086e3427a884643b9c1e958cab62 460 TIGRFAM TIGR03920 T7SS_EccD: type VII secretion integral membrane protein EccD 12 453 1.5E-54 T 14-10-2018 IPR006707 Type VII secretion system membrane protein EccD AMIS_13730 bf0e086e3427a884643b9c1e958cab62 460 PIRSF PIRSF017804 1 456 2.0E-70 T 14-10-2018 IPR006707 Type VII secretion system membrane protein EccD AMIS_13730 bf0e086e3427a884643b9c1e958cab62 460 Pfam PF08817 WXG100 protein secretion system (Wss), protein YukD 10 83 1.7E-21 T 14-10-2018 IPR024962 YukD-like AMIS_13730 bf0e086e3427a884643b9c1e958cab62 460 Gene3D G3DSA:3.10.20.90 5 84 3.1E-8 T 14-10-2018 AMIS_81220 ef4d44f5f9bf5babd5d19f5beb548d09 339 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 38 258 4.0E-56 T 14-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_81220 ef4d44f5f9bf5babd5d19f5beb548d09 339 Pfam PF02096 60Kd inner membrane protein 38 258 3.4E-55 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AMIS_18150 a0d2f2a31e31f695d80d35056e912663 369 Gene3D G3DSA:3.90.230.10 141 369 9.1E-73 T 14-10-2018 AMIS_18150 a0d2f2a31e31f695d80d35056e912663 369 Pfam PF01321 Creatinase/Prolidase N-terminal domain 11 143 5.5E-10 T 14-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 AMIS_18150 a0d2f2a31e31f695d80d35056e912663 369 Pfam PF00557 Metallopeptidase family M24 152 352 2.6E-56 T 14-10-2018 IPR000994 Peptidase M24 AMIS_18150 a0d2f2a31e31f695d80d35056e912663 369 SUPERFAMILY SSF55920 142 368 4.19E-70 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like AMIS_18150 a0d2f2a31e31f695d80d35056e912663 369 SUPERFAMILY SSF53092 1 141 3.14E-12 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AMIS_18150 a0d2f2a31e31f695d80d35056e912663 369 Gene3D G3DSA:3.40.350.10 1 136 2.5E-28 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AMIS_73370 8711206f1ed990e17f7d37e0fe3db2f9 321 ProSitePatterns PS00893 Nudix box signature. 212 233 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMIS_73370 8711206f1ed990e17f7d37e0fe3db2f9 321 Pfam PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain 54 135 1.4E-6 T 14-10-2018 IPR015375 NADH pyrophosphatase-like, N-terminal GO:0016787 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 AMIS_73370 8711206f1ed990e17f7d37e0fe3db2f9 321 SUPERFAMILY SSF55811 122 293 4.6E-37 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMIS_73370 8711206f1ed990e17f7d37e0fe3db2f9 321 Gene3D G3DSA:3.90.79.10 170 320 2.6E-31 T 14-10-2018 AMIS_73370 8711206f1ed990e17f7d37e0fe3db2f9 321 Pfam PF00293 NUDIX domain 187 288 3.9E-13 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMIS_38380 e1128a88a360eb73a63030ec4d842832 375 ProSitePatterns PS00480 Citrate synthase signature. 242 254 - T 14-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AMIS_38380 e1128a88a360eb73a63030ec4d842832 375 Gene3D G3DSA:1.10.580.10 1 67 9.1E-11 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AMIS_38380 e1128a88a360eb73a63030ec4d842832 375 SUPERFAMILY SSF48256 2 354 1.14E-94 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 AMIS_38380 e1128a88a360eb73a63030ec4d842832 375 Pfam PF00285 Citrate synthase, C-terminal domain 7 343 2.1E-86 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 AMIS_38380 e1128a88a360eb73a63030ec4d842832 375 Gene3D G3DSA:1.10.230.10 208 308 6.0E-68 T 14-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain AMIS_38380 e1128a88a360eb73a63030ec4d842832 375 Gene3D G3DSA:1.10.580.10 100 341 6.0E-68 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AMIS_38380 e1128a88a360eb73a63030ec4d842832 375 PRINTS PR00143 Citrate synthase signature 182 210 1.4E-28 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 AMIS_38380 e1128a88a360eb73a63030ec4d842832 375 PRINTS PR00143 Citrate synthase signature 314 328 1.4E-28 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 AMIS_38380 e1128a88a360eb73a63030ec4d842832 375 PRINTS PR00143 Citrate synthase signature 294 310 1.4E-28 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 AMIS_38380 e1128a88a360eb73a63030ec4d842832 375 PRINTS PR00143 Citrate synthase signature 160 175 1.4E-28 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 AMIS_38380 e1128a88a360eb73a63030ec4d842832 375 PRINTS PR00143 Citrate synthase signature 235 255 1.4E-28 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 AMIS_770 370269c4924a458efc39dd7790f11ae8 328 SUPERFAMILY SSF52518 4 183 8.34E-68 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold AMIS_770 370269c4924a458efc39dd7790f11ae8 328 Gene3D G3DSA:3.40.50.970 1 195 3.4E-78 T 14-10-2018 AMIS_770 370269c4924a458efc39dd7790f11ae8 328 SMART SM00861 5 180 1.9E-69 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AMIS_770 370269c4924a458efc39dd7790f11ae8 328 Gene3D G3DSA:3.40.50.920 196 326 6.5E-45 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AMIS_770 370269c4924a458efc39dd7790f11ae8 328 SUPERFAMILY SSF52922 194 326 2.09E-36 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AMIS_770 370269c4924a458efc39dd7790f11ae8 328 Pfam PF02780 Transketolase, C-terminal domain 199 318 4.1E-35 T 14-10-2018 IPR033248 Transketolase, C-terminal domain AMIS_770 370269c4924a458efc39dd7790f11ae8 328 Pfam PF02779 Transketolase, pyrimidine binding domain 4 178 5.7E-48 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AMIS_72610 d8c74fc9464a94fc2424ce8619200682 268 Pfam PF02274 Amidinotransferase 63 266 2.9E-14 T 14-10-2018 AMIS_72610 d8c74fc9464a94fc2424ce8619200682 268 Gene3D G3DSA:3.75.10.10 8 265 1.2E-52 T 14-10-2018 AMIS_72610 d8c74fc9464a94fc2424ce8619200682 268 SUPERFAMILY SSF55909 8 266 1.96E-52 T 14-10-2018 AMIS_46010 e0dcb9a38a6229c46676fad08d2f742f 707 TIGRFAM TIGR04267 mod_HExxH: HEXXH motif domain 361 700 1.1E-83 T 14-10-2018 IPR026337 HEXXH motif domain AMIS_46010 e0dcb9a38a6229c46676fad08d2f742f 707 TIGRFAM TIGR04269 SAM_SPASM_FxsB: radical SAM/SPASM domain protein, FxsB family 1 345 3.4E-146 T 14-10-2018 IPR026335 Radical SAM/SPASM domain, FxsB family AMIS_46010 e0dcb9a38a6229c46676fad08d2f742f 707 Gene3D G3DSA:3.20.20.70 1 356 2.6E-58 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_46010 e0dcb9a38a6229c46676fad08d2f742f 707 Pfam PF13394 4Fe-4S single cluster domain 8 100 4.6E-5 T 14-10-2018 AMIS_46010 e0dcb9a38a6229c46676fad08d2f742f 707 Pfam PF04055 Radical SAM superfamily 6 151 1.4E-12 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMIS_46010 e0dcb9a38a6229c46676fad08d2f742f 707 SUPERFAMILY SSF102114 2 316 1.7E-22 T 14-10-2018 AMIS_40040 15d2906144d4bb0d5d393941bc09c8c2 520 Pfam PF13450 NAD(P)-binding Rossmann-like domain 14 67 1.2E-6 T 14-10-2018 AMIS_40040 15d2906144d4bb0d5d393941bc09c8c2 520 Gene3D G3DSA:3.50.50.60 322 432 3.2E-6 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_40040 15d2906144d4bb0d5d393941bc09c8c2 520 Pfam PF00743 Flavin-binding monooxygenase-like 84 349 8.4E-13 T 14-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 AMIS_40040 15d2906144d4bb0d5d393941bc09c8c2 520 SUPERFAMILY SSF51905 8 392 1.2E-53 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_40040 15d2906144d4bb0d5d393941bc09c8c2 520 Gene3D G3DSA:3.50.50.60 159 258 3.8E-14 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_40040 15d2906144d4bb0d5d393941bc09c8c2 520 Gene3D G3DSA:3.50.50.60 3 158 6.4E-40 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_79370 bfd9bd0f5056421b64ce7436ea11b4ff 1135 SMART SM00862 16 98 3.1E-13 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_79370 bfd9bd0f5056421b64ce7436ea11b4ff 1135 SUPERFAMILY SSF46894 2 96 1.11E-13 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_79370 bfd9bd0f5056421b64ce7436ea11b4ff 1135 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 1071 1085 2.1E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_79370 bfd9bd0f5056421b64ce7436ea11b4ff 1135 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 1085 1101 2.1E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_79370 bfd9bd0f5056421b64ce7436ea11b4ff 1135 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 1101 1113 2.1E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_79370 bfd9bd0f5056421b64ce7436ea11b4ff 1135 Pfam PF00196 Bacterial regulatory proteins, luxR family 1071 1121 1.5E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_79370 bfd9bd0f5056421b64ce7436ea11b4ff 1135 Gene3D G3DSA:1.25.40.10 100 213 7.9E-20 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_79370 bfd9bd0f5056421b64ce7436ea11b4ff 1135 SUPERFAMILY SSF46894 1058 1122 3.13E-15 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_79370 bfd9bd0f5056421b64ce7436ea11b4ff 1135 SMART SM01043 103 215 1.5E-14 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain AMIS_79370 bfd9bd0f5056421b64ce7436ea11b4ff 1135 SUPERFAMILY SSF48452 99 206 1.06E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_79370 bfd9bd0f5056421b64ce7436ea11b4ff 1135 Gene3D G3DSA:1.10.10.10 1023 1128 6.5E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_79370 bfd9bd0f5056421b64ce7436ea11b4ff 1135 SMART SM00421 1068 1125 5.7E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_79370 bfd9bd0f5056421b64ce7436ea11b4ff 1135 Pfam PF00486 Transcriptional regulatory protein, C terminal 18 95 5.7E-10 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_79370 bfd9bd0f5056421b64ce7436ea11b4ff 1135 Gene3D G3DSA:1.10.10.10 1 99 4.3E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_79370 bfd9bd0f5056421b64ce7436ea11b4ff 1135 SUPERFAMILY SSF52540 232 461 1.83E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_79370 bfd9bd0f5056421b64ce7436ea11b4ff 1135 Pfam PF03704 Bacterial transcriptional activator domain 103 210 7.2E-15 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain AMIS_79370 bfd9bd0f5056421b64ce7436ea11b4ff 1135 Pfam PF13191 AAA ATPase domain 234 389 1.1E-16 T 14-10-2018 AMIS_79370 bfd9bd0f5056421b64ce7436ea11b4ff 1135 Gene3D G3DSA:1.25.40.10 704 875 5.0E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_79370 bfd9bd0f5056421b64ce7436ea11b4ff 1135 ProSitePatterns PS00622 LuxR-type HTH domain signature. 1085 1112 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_56310 3af38a402703d73e79a8db5da68b9d52 514 Pfam PF00501 AMP-binding enzyme 43 418 7.7E-67 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMIS_56310 3af38a402703d73e79a8db5da68b9d52 514 ProSitePatterns PS00455 Putative AMP-binding domain signature. 179 190 - T 14-10-2018 IPR020845 AMP-binding, conserved site AMIS_56310 3af38a402703d73e79a8db5da68b9d52 514 SUPERFAMILY SSF56801 38 514 2.75E-120 T 14-10-2018 AMIS_56310 3af38a402703d73e79a8db5da68b9d52 514 Gene3D G3DSA:3.40.50.12780 37 409 1.6E-83 T 14-10-2018 AMIS_56310 3af38a402703d73e79a8db5da68b9d52 514 Pfam PF13193 AMP-binding enzyme C-terminal domain 427 502 4.2E-20 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AMIS_56310 3af38a402703d73e79a8db5da68b9d52 514 Gene3D G3DSA:3.30.300.310 414 513 7.1E-31 T 14-10-2018 AMIS_8660 b2481162cce1e8fdf76a9145d33781a4 63 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 3 57 21.818 T 14-10-2018 IPR038053 Uncharacterised protein family UPF0434 AMIS_8660 b2481162cce1e8fdf76a9145d33781a4 63 SUPERFAMILY SSF158997 2 56 9.55E-16 T 14-10-2018 AMIS_8660 b2481162cce1e8fdf76a9145d33781a4 63 Pfam PF03966 Trm112p-like protein 4 43 4.8E-8 T 14-10-2018 IPR005651 Trm112-like AMIS_8660 b2481162cce1e8fdf76a9145d33781a4 63 Gene3D G3DSA:2.20.25.10 10 62 2.5E-17 T 14-10-2018 AMIS_51030 592d0d8bfab129b5215c46b3adb5be05 460 SUPERFAMILY SSF56176 166 245 2.62E-21 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AMIS_51030 592d0d8bfab129b5215c46b3adb5be05 460 Pfam PF01565 FAD binding domain 27 138 1.5E-11 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AMIS_51030 592d0d8bfab129b5215c46b3adb5be05 460 Pfam PF01565 FAD binding domain 165 207 2.6E-7 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AMIS_51030 592d0d8bfab129b5215c46b3adb5be05 460 SUPERFAMILY SSF56176 23 135 9.49E-12 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AMIS_51030 592d0d8bfab129b5215c46b3adb5be05 460 Gene3D G3DSA:3.30.465.40 12 148 8.3E-11 T 14-10-2018 AMIS_51030 592d0d8bfab129b5215c46b3adb5be05 460 SUPERFAMILY SSF55103 259 457 8.5E-13 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AMIS_51030 592d0d8bfab129b5215c46b3adb5be05 460 Gene3D G3DSA:3.30.465.10 151 244 2.2E-27 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AMIS_59430 e5ccc4867cb87628833a95320c2da94b 99 Gene3D G3DSA:1.10.260.40 12 97 3.2E-18 T 14-10-2018 AMIS_59430 e5ccc4867cb87628833a95320c2da94b 99 Pfam PF13560 Helix-turn-helix domain 32 87 2.3E-15 T 14-10-2018 AMIS_59430 e5ccc4867cb87628833a95320c2da94b 99 SUPERFAMILY SSF47413 24 97 2.95E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_59430 e5ccc4867cb87628833a95320c2da94b 99 SMART SM00530 36 91 1.3E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMIS_28650 61ee675097a20389d15c3e0353254ff5 304 SUPERFAMILY SSF54427 184 300 4.81E-8 T 14-10-2018 IPR032710 NTF2-like domain superfamily AMIS_28650 61ee675097a20389d15c3e0353254ff5 304 Pfam PF04542 Sigma-70 region 2 28 91 1.4E-15 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_28650 61ee675097a20389d15c3e0353254ff5 304 TIGRFAM TIGR02957 SigX4: RNA polymerase sigma-70 factor, TIGR02957 family 27 303 6.4E-99 T 14-10-2018 IPR014303 RNA polymerase sigma-70, ECF type AMIS_28650 61ee675097a20389d15c3e0353254ff5 304 Pfam PF08281 Sigma-70, region 4 129 175 3.0E-11 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_28650 61ee675097a20389d15c3e0353254ff5 304 SUPERFAMILY SSF88659 123 176 4.58E-9 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_28650 61ee675097a20389d15c3e0353254ff5 304 Gene3D G3DSA:1.10.1740.10 12 88 1.2E-8 T 14-10-2018 AMIS_28650 61ee675097a20389d15c3e0353254ff5 304 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 24 176 7.1E-13 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_28650 61ee675097a20389d15c3e0353254ff5 304 SUPERFAMILY SSF88946 23 107 1.22E-12 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_28650 61ee675097a20389d15c3e0353254ff5 304 Gene3D G3DSA:1.10.10.10 126 180 1.3E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_26840 31f8c23ae097674c2161c5568cdd5824 393 Pfam PF13692 Glycosyl transferases group 1 210 350 6.2E-28 T 14-10-2018 AMIS_26840 31f8c23ae097674c2161c5568cdd5824 393 Gene3D G3DSA:3.40.50.2000 200 368 1.6E-37 T 14-10-2018 AMIS_26840 31f8c23ae097674c2161c5568cdd5824 393 SUPERFAMILY SSF53756 17 383 1.2E-63 T 14-10-2018 AMIS_26840 31f8c23ae097674c2161c5568cdd5824 393 Pfam PF13439 Glycosyltransferase Family 4 23 190 4.9E-17 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AMIS_26840 31f8c23ae097674c2161c5568cdd5824 393 Gene3D G3DSA:3.40.50.2000 1 199 4.3E-20 T 14-10-2018 AMIS_62810 135145cf060e20bb4f02feb42293da39 199 Gene3D G3DSA:1.10.150.20 66 140 3.0E-20 T 14-10-2018 AMIS_62810 135145cf060e20bb4f02feb42293da39 199 Gene3D G3DSA:2.40.50.140 1 65 6.2E-24 T 14-10-2018 AMIS_62810 135145cf060e20bb4f02feb42293da39 199 Pfam PF01330 RuvA N terminal domain 1 61 3.6E-18 T 14-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 AMIS_62810 135145cf060e20bb4f02feb42293da39 199 SUPERFAMILY SSF46929 148 197 3.02E-6 T 14-10-2018 IPR036267 RuvA, C-terminal domain superfamily AMIS_62810 135145cf060e20bb4f02feb42293da39 199 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 196 25.904 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 AMIS_62810 135145cf060e20bb4f02feb42293da39 199 SUPERFAMILY SSF50249 1 62 1.03E-13 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMIS_62810 135145cf060e20bb4f02feb42293da39 199 Pfam PF14520 Helix-hairpin-helix domain 71 129 1.4E-12 T 14-10-2018 AMIS_62810 135145cf060e20bb4f02feb42293da39 199 SMART SM00278 107 126 31.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AMIS_62810 135145cf060e20bb4f02feb42293da39 199 SMART SM00278 72 91 37.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AMIS_62810 135145cf060e20bb4f02feb42293da39 199 Gene3D G3DSA:1.10.8.10 141 199 8.8E-13 T 14-10-2018 AMIS_62810 135145cf060e20bb4f02feb42293da39 199 Pfam PF07499 RuvA, C-terminal domain 148 196 2.0E-7 T 14-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 AMIS_62810 135145cf060e20bb4f02feb42293da39 199 SUPERFAMILY SSF47781 65 132 2.41E-17 T 14-10-2018 IPR010994 RuvA domain 2-like AMIS_4240 0b4a325f5f0bed770c02b32cc6faef1b 407 SUPERFAMILY SSF56801 39 405 3.79E-72 T 14-10-2018 AMIS_4240 0b4a325f5f0bed770c02b32cc6faef1b 407 Pfam PF00501 AMP-binding enzyme 81 324 3.3E-49 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMIS_4240 0b4a325f5f0bed770c02b32cc6faef1b 407 ProSitePatterns PS00455 Putative AMP-binding domain signature. 89 100 - T 14-10-2018 IPR020845 AMP-binding, conserved site AMIS_4240 0b4a325f5f0bed770c02b32cc6faef1b 407 Gene3D G3DSA:3.30.300.30 326 407 5.2E-5 T 14-10-2018 AMIS_4240 0b4a325f5f0bed770c02b32cc6faef1b 407 Gene3D G3DSA:3.40.50.12780 13 320 1.8E-66 T 14-10-2018 AMIS_75490 97f132f4a80edea7bd5d54faf39e7ea4 135 SUPERFAMILY SSF51735 5 129 9.46E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_75490 97f132f4a80edea7bd5d54faf39e7ea4 135 Gene3D G3DSA:3.40.50.720 1 132 4.0E-42 T 14-10-2018 AMIS_75490 97f132f4a80edea7bd5d54faf39e7ea4 135 Pfam PF13380 CoA binding domain 13 125 5.7E-38 T 14-10-2018 IPR003781 CoA-binding GO:0048037 AMIS_75490 97f132f4a80edea7bd5d54faf39e7ea4 135 SMART SM00881 8 100 4.9E-21 T 14-10-2018 IPR003781 CoA-binding GO:0048037 AMIS_8030 9bc55f4c2de11b5ae283a2792f862a69 139 Pfam PF14155 Domain of unknown function (DUF4307) 25 135 2.9E-29 T 14-10-2018 IPR025443 Protein of unknown function DUF4307 AMIS_75890 bcb306f349dfa454305d4668b271cbb4 330 PIRSF PIRSF016753 42 329 5.3E-91 T 14-10-2018 IPR016676 Phospholipid/glycerol acyltransferase, predicted AMIS_75890 bcb306f349dfa454305d4668b271cbb4 330 SUPERFAMILY SSF69593 94 321 3.27E-31 T 14-10-2018 AMIS_75890 bcb306f349dfa454305d4668b271cbb4 330 Pfam PF01553 Acyltransferase 104 233 5.2E-16 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AMIS_75890 bcb306f349dfa454305d4668b271cbb4 330 SMART SM00563 117 236 2.0E-15 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AMIS_75940 2f140507a454ae381bb6982937faf3a2 177 Pfam PF07336 Putative stress-induced transcription regulator 8 114 1.3E-8 T 14-10-2018 IPR010852 Putative stress-induced transcription regulator AMIS_75940 2f140507a454ae381bb6982937faf3a2 177 Pfam PF11706 CGNR zinc finger 128 170 4.4E-13 T 14-10-2018 IPR021005 Zinc finger, CGNR AMIS_75940 2f140507a454ae381bb6982937faf3a2 177 SUPERFAMILY SSF160904 7 169 4.45E-36 T 14-10-2018 AMIS_75940 2f140507a454ae381bb6982937faf3a2 177 Gene3D G3DSA:1.10.3300.10 1 172 1.8E-46 T 14-10-2018 IPR023286 ABATE domain superfamily AMIS_42590 89ab11214c839aced07c01988578727e 177 Pfam PF14435 SUKH-4 immunity protein 13 173 1.2E-29 T 14-10-2018 IPR025851 SUKH-4 immunity protein AMIS_63730 fc29174845fbd35de777f14ab4e6fe71 443 TIGRFAM TIGR03178 allantoinase: allantoinase 3 426 3.8E-174 T 14-10-2018 IPR017593 Allantoinase GO:0000256|GO:0004038|GO:0008270|GO:0050897 KEGG: 00230+3.5.2.5|MetaCyc: PWY-5697|MetaCyc: PWY-5698 AMIS_63730 fc29174845fbd35de777f14ab4e6fe71 443 Gene3D G3DSA:3.20.20.140 1 425 1.8E-142 T 14-10-2018 AMIS_63730 fc29174845fbd35de777f14ab4e6fe71 443 Pfam PF01979 Amidohydrolase family 52 421 1.4E-25 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AMIS_63730 fc29174845fbd35de777f14ab4e6fe71 443 SUPERFAMILY SSF51556 55 369 3.62E-98 T 14-10-2018 IPR032466 Metal-dependent hydrolase AMIS_63730 fc29174845fbd35de777f14ab4e6fe71 443 SUPERFAMILY SSF51338 1 425 8.38E-25 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMIS_36840 5b99a6cace19ec1c2527e656e04b74e1 104 TIGRFAM TIGR03954 integ_memb_HG: integral membrane protein 7 90 8.4E-24 T 14-10-2018 IPR023845 Domain of unknown function DUF3817, transmembrane AMIS_36840 5b99a6cace19ec1c2527e656e04b74e1 104 Pfam PF12823 Domain of unknown function (DUF3817) 5 91 5.8E-22 T 14-10-2018 IPR023845 Domain of unknown function DUF3817, transmembrane AMIS_45840 89b860cf9814f1f32089318311a68654 318 Gene3D G3DSA:3.40.50.720 119 263 3.8E-44 T 14-10-2018 AMIS_45840 89b860cf9814f1f32089318311a68654 318 SUPERFAMILY SSF50129 4 141 2.6E-14 T 14-10-2018 IPR011032 GroES-like superfamily AMIS_45840 89b860cf9814f1f32089318311a68654 318 Gene3D G3DSA:3.90.180.10 18 303 3.8E-44 T 14-10-2018 AMIS_45840 89b860cf9814f1f32089318311a68654 318 Pfam PF00107 Zinc-binding dehydrogenase 146 264 1.6E-16 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMIS_45840 89b860cf9814f1f32089318311a68654 318 SUPERFAMILY SSF51735 112 284 4.38E-25 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_45840 89b860cf9814f1f32089318311a68654 318 SMART SM00829 11 316 4.8E-5 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMIS_74110 c91305e35b9a5ec3733097700a741762 415 SUPERFAMILY SSF47413 38 82 7.7E-6 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_74110 c91305e35b9a5ec3733097700a741762 415 SMART SM00530 28 84 0.0065 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMIS_74110 c91305e35b9a5ec3733097700a741762 415 Gene3D G3DSA:1.10.260.40 28 89 1.0E-5 T 14-10-2018 AMIS_9320 90a47410cdb994d968b596d7ac917442 368 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 282 298 8.2E-19 T 14-10-2018 AMIS_9320 90a47410cdb994d968b596d7ac917442 368 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 267 282 8.2E-19 T 14-10-2018 AMIS_9320 90a47410cdb994d968b596d7ac917442 368 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 8.2E-19 T 14-10-2018 AMIS_9320 90a47410cdb994d968b596d7ac917442 368 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 145 160 8.2E-19 T 14-10-2018 AMIS_9320 90a47410cdb994d968b596d7ac917442 368 SUPERFAMILY SSF51905 4 339 8.19E-53 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_9320 90a47410cdb994d968b596d7ac917442 368 Gene3D G3DSA:3.30.9.30 37 259 2.0E-77 T 14-10-2018 AMIS_9320 90a47410cdb994d968b596d7ac917442 368 Gene3D G3DSA:3.50.50.60 6 331 2.0E-77 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_9320 90a47410cdb994d968b596d7ac917442 368 Pfam PF01494 FAD binding domain 4 326 5.9E-24 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 AMIS_40990 87939bf094efcbee98fb0fc037dbb762 189 Pfam PF13376 Bacteriocin-protection, YdeI or OmpD-Associated 126 183 1.7E-23 T 14-10-2018 AMIS_17510 4bc2a43150e8819ba40b8bf4f8eaeeea 516 Gene3D G3DSA:3.30.450.40 205 329 3.2E-18 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_17510 4bc2a43150e8819ba40b8bf4f8eaeeea 516 SUPERFAMILY SSF58104 326 513 7.72E-39 T 14-10-2018 AMIS_17510 4bc2a43150e8819ba40b8bf4f8eaeeea 516 SUPERFAMILY SSF55781 38 191 3.92E-12 T 14-10-2018 AMIS_17510 4bc2a43150e8819ba40b8bf4f8eaeeea 516 Pfam PF13185 GAF domain 45 174 1.3E-7 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_17510 4bc2a43150e8819ba40b8bf4f8eaeeea 516 Pfam PF13185 GAF domain 212 346 2.2E-13 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_17510 4bc2a43150e8819ba40b8bf4f8eaeeea 516 SMART SM00065 210 361 6.5E-4 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_17510 4bc2a43150e8819ba40b8bf4f8eaeeea 516 Gene3D G3DSA:3.30.450.40 18 193 2.6E-13 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_17510 4bc2a43150e8819ba40b8bf4f8eaeeea 516 SUPERFAMILY SSF55781 195 356 5.67E-15 T 14-10-2018 AMIS_17510 4bc2a43150e8819ba40b8bf4f8eaeeea 516 SMART SM00283 317 516 1.1E-6 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_17510 4bc2a43150e8819ba40b8bf4f8eaeeea 516 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 378 511 3.2E-29 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_17510 4bc2a43150e8819ba40b8bf4f8eaeeea 516 Gene3D G3DSA:1.10.287.950 331 516 2.1E-36 T 14-10-2018 AMIS_41190 ec2f248461f7c9a4960eadbe06f86b8b 123 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 71 7.8E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_41190 ec2f248461f7c9a4960eadbe06f86b8b 123 SUPERFAMILY SSF46785 4 75 4.52E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_41190 ec2f248461f7c9a4960eadbe06f86b8b 123 SMART SM00345 12 71 5.3E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_41190 ec2f248461f7c9a4960eadbe06f86b8b 123 Gene3D G3DSA:1.10.10.10 5 122 7.2E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_34660 0456183d3c700874e771cf9511c5c5c9 224 Gene3D G3DSA:3.40.50.10420 31 222 3.3E-51 T 14-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily AMIS_34660 0456183d3c700874e771cf9511c5c5c9 224 Pfam PF02589 LUD domain 42 222 1.4E-22 T 14-10-2018 IPR003741 LUD domain AMIS_34660 0456183d3c700874e771cf9511c5c5c9 224 SUPERFAMILY SSF100950 37 222 1.51E-35 T 14-10-2018 IPR037171 NagB/RpiA transferase-like AMIS_57610 8128e4ca85fa0818cf3cacf89830df2a 201 SUPERFAMILY SSF53335 18 179 9.53E-21 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_57610 8128e4ca85fa0818cf3cacf89830df2a 201 Pfam PF05401 Nodulation protein S (NodS) 25 153 2.7E-16 T 14-10-2018 IPR008715 SAM-dependent methyltransferase, NodS-related GO:0008757|GO:0009312|GO:0009877 AMIS_57610 8128e4ca85fa0818cf3cacf89830df2a 201 Gene3D G3DSA:3.40.50.150 36 199 2.8E-37 T 14-10-2018 AMIS_31870 910cabaa533d50b9316405c933b11519 368 Gene3D G3DSA:1.10.260.40 9 81 9.2E-6 T 14-10-2018 AMIS_68030 7a0a844a1c59f724971dbfcfe4a6d053 239 SUPERFAMILY SSF56784 1 239 2.25E-34 T 14-10-2018 IPR036412 HAD-like superfamily AMIS_68030 7a0a844a1c59f724971dbfcfe4a6d053 239 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 122 201 1.2E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMIS_68030 7a0a844a1c59f724971dbfcfe4a6d053 239 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 119 132 2.9E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMIS_68030 7a0a844a1c59f724971dbfcfe4a6d053 239 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 151 167 2.9E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMIS_68030 7a0a844a1c59f724971dbfcfe4a6d053 239 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 2.9E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMIS_68030 7a0a844a1c59f724971dbfcfe4a6d053 239 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 169 189 2.9E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMIS_68030 7a0a844a1c59f724971dbfcfe4a6d053 239 Gene3D G3DSA:3.40.50.1000 1 218 1.4E-33 T 14-10-2018 IPR023214 HAD superfamily AMIS_68030 7a0a844a1c59f724971dbfcfe4a6d053 239 Pfam PF13419 Haloacid dehalogenase-like hydrolase 104 203 5.7E-17 T 14-10-2018 AMIS_34330 eecd7698419fe4617b3de65c3f44203f 252 SUPERFAMILY SSF46458 104 216 1.69E-23 T 14-10-2018 IPR009050 Globin-like superfamily AMIS_34330 eecd7698419fe4617b3de65c3f44203f 252 Gene3D G3DSA:3.30.70.100 1 94 3.1E-20 T 14-10-2018 AMIS_34330 eecd7698419fe4617b3de65c3f44203f 252 Gene3D G3DSA:1.10.490.10 102 228 1.7E-28 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 AMIS_34330 eecd7698419fe4617b3de65c3f44203f 252 SUPERFAMILY SSF54909 3 89 1.02E-10 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel AMIS_34330 eecd7698419fe4617b3de65c3f44203f 252 Pfam PF03992 Antibiotic biosynthesis monooxygenase 13 71 3.8E-5 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain AMIS_34330 eecd7698419fe4617b3de65c3f44203f 252 Pfam PF01152 Bacterial-like globin 105 203 3.4E-17 T 14-10-2018 IPR001486 Truncated hemoglobin GO:0019825 AMIS_31920 b0e2ade2eb0dd249d23045e2f7799a7e 533 SUPERFAMILY SSF58104 238 531 2.75E-62 T 14-10-2018 AMIS_31920 b0e2ade2eb0dd249d23045e2f7799a7e 533 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 453 482 4.2E-24 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_31920 b0e2ade2eb0dd249d23045e2f7799a7e 533 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 22 47 4.2E-24 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_31920 b0e2ade2eb0dd249d23045e2f7799a7e 533 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 376 403 4.2E-24 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_31920 b0e2ade2eb0dd249d23045e2f7799a7e 533 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 68 83 4.2E-24 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_31920 b0e2ade2eb0dd249d23045e2f7799a7e 533 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 295 324 4.2E-24 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_31920 b0e2ade2eb0dd249d23045e2f7799a7e 533 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 405 434 4.2E-24 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_31920 b0e2ade2eb0dd249d23045e2f7799a7e 533 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 337 501 3.5E-34 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_31920 b0e2ade2eb0dd249d23045e2f7799a7e 533 Gene3D G3DSA:1.10.287.950 217 533 3.1E-62 T 14-10-2018 AMIS_31920 b0e2ade2eb0dd249d23045e2f7799a7e 533 Pfam PF12729 Four helix bundle sensory module for signal transduction 11 188 1.3E-16 T 14-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain AMIS_31920 b0e2ade2eb0dd249d23045e2f7799a7e 533 SMART SM00304 218 270 3.5E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_31920 b0e2ade2eb0dd249d23045e2f7799a7e 533 SMART SM00283 278 532 1.1E-48 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_34620 b15874bd16e0134f847fe1cfe944dd03 676 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 418 603 0.0069 T 14-10-2018 AMIS_34620 b15874bd16e0134f847fe1cfe944dd03 676 TIGRFAM TIGR02632 RhaD_aldol-ADH: rhamnulose-1-phosphate aldolase/alcohol dehydrogenase 6 676 0.0 T 14-10-2018 IPR013454 Bifunctional rhamnulose-1-phosphate aldolase/alcohol dehydrogenase AMIS_34620 b15874bd16e0134f847fe1cfe944dd03 676 Gene3D G3DSA:3.40.225.10 5 215 6.2E-50 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily AMIS_34620 b15874bd16e0134f847fe1cfe944dd03 676 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 10 210 3.1E-23 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal AMIS_34620 b15874bd16e0134f847fe1cfe944dd03 676 SMART SM01007 8 210 3.4E-32 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal AMIS_34620 b15874bd16e0134f847fe1cfe944dd03 676 SUPERFAMILY SSF51735 406 673 4.97E-62 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_34620 b15874bd16e0134f847fe1cfe944dd03 676 SUPERFAMILY SSF53639 7 211 1.81E-30 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily AMIS_34620 b15874bd16e0134f847fe1cfe944dd03 676 Gene3D G3DSA:3.40.50.720 398 673 3.5E-62 T 14-10-2018 AMIS_34620 b15874bd16e0134f847fe1cfe944dd03 676 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 587 604 3.5E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_34620 b15874bd16e0134f847fe1cfe944dd03 676 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 419 436 3.5E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_34620 b15874bd16e0134f847fe1cfe944dd03 676 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 492 503 3.5E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_34620 b15874bd16e0134f847fe1cfe944dd03 676 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 634 654 3.5E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_34620 b15874bd16e0134f847fe1cfe944dd03 676 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 540 556 3.5E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_34620 b15874bd16e0134f847fe1cfe944dd03 676 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 566 585 3.5E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_34620 b15874bd16e0134f847fe1cfe944dd03 676 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 427 670 1.7E-45 T 14-10-2018 AMIS_61450 798f4cabf070c6150aa4b2f027710b97 540 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 326 524 3.5E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_61450 798f4cabf070c6150aa4b2f027710b97 540 SUPERFAMILY SSF161098 290 525 3.01E-52 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_61450 798f4cabf070c6150aa4b2f027710b97 540 Gene3D G3DSA:1.20.58.370 28 120 1.9E-9 T 14-10-2018 IPR035277 MalF, N-terminal AMIS_61450 798f4cabf070c6150aa4b2f027710b97 540 Pfam PF16296 N-terminal of TM subunit in PBP-dependent ABC transporters 98 181 4.9E-36 T 14-10-2018 IPR032550 PBP-dependent ABC transporters TM subunit, N-terminal AMIS_61450 798f4cabf070c6150aa4b2f027710b97 540 Gene3D G3DSA:1.10.3720.10 300 535 5.2E-59 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_61450 798f4cabf070c6150aa4b2f027710b97 540 SUPERFAMILY SSF160964 39 289 2.09E-61 T 14-10-2018 AMIS_57340 c408ffbbcce657e0e36852dc74d4dab0 937 SUPERFAMILY SSF52540 682 926 4.51E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_57340 c408ffbbcce657e0e36852dc74d4dab0 937 Pfam PF00005 ABC transporter 700 856 4.7E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_57340 c408ffbbcce657e0e36852dc74d4dab0 937 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 907 928 1.0E-6 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AMIS_57340 c408ffbbcce657e0e36852dc74d4dab0 937 SMART SM00382 708 906 7.5E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_57340 c408ffbbcce657e0e36852dc74d4dab0 937 Pfam PF02653 Branched-chain amino acid transport system / permease component 332 571 1.9E-21 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 AMIS_57340 c408ffbbcce657e0e36852dc74d4dab0 937 Pfam PF02653 Branched-chain amino acid transport system / permease component 15 281 6.2E-28 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 AMIS_57340 c408ffbbcce657e0e36852dc74d4dab0 937 Gene3D G3DSA:3.40.50.300 682 929 7.0E-58 T 14-10-2018 AMIS_10060 56066715b245d1f2e7ae46fbec59ffd4 144 SMART SM00450 22 119 9.9E-16 T 14-10-2018 IPR001763 Rhodanese-like domain AMIS_10060 56066715b245d1f2e7ae46fbec59ffd4 144 Gene3D G3DSA:3.40.250.10 4 121 9.9E-29 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily AMIS_10060 56066715b245d1f2e7ae46fbec59ffd4 144 SUPERFAMILY SSF52821 19 122 4.32E-24 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily AMIS_10060 56066715b245d1f2e7ae46fbec59ffd4 144 Pfam PF00581 Rhodanese-like domain 34 115 7.1E-13 T 14-10-2018 IPR001763 Rhodanese-like domain AMIS_59250 d69498651799fb056a4a7bd7bfd7bae7 788 SMART SM00060 115 193 5.9E-5 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 AMIS_59250 d69498651799fb056a4a7bd7bfd7bae7 788 Gene3D G3DSA:2.60.40.10 112 206 9.1E-8 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_59250 d69498651799fb056a4a7bd7bfd7bae7 788 SUPERFAMILY SSF49265 117 200 7.99E-7 T 14-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 AMIS_12830 ccb0e9996bf98e81f8dd36b7c5c55a76 159 Pfam PF16259 Domain of unknown function (DUF4913) 38 144 3.6E-36 T 14-10-2018 IPR032584 Protein of unknown function DUF4913 AMIS_72840 73fc2e638c847615105b4465f6f41770 418 Pfam PF00390 Malic enzyme, N-terminal domain 28 123 3.5E-23 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AMIS_72840 73fc2e638c847615105b4465f6f41770 418 SMART SM01274 27 160 3.8E-81 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AMIS_72840 73fc2e638c847615105b4465f6f41770 418 SUPERFAMILY SSF51735 172 405 6.0E-68 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_72840 73fc2e638c847615105b4465f6f41770 418 Gene3D G3DSA:3.40.50.10380 15 169 2.2E-69 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 AMIS_72840 73fc2e638c847615105b4465f6f41770 418 PIRSF PIRSF000106 32 418 3.4E-76 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AMIS_72840 73fc2e638c847615105b4465f6f41770 418 Gene3D G3DSA:3.40.50.720 170 417 4.5E-74 T 14-10-2018 AMIS_72840 73fc2e638c847615105b4465f6f41770 418 SUPERFAMILY SSF53223 21 170 2.81E-55 T 14-10-2018 AMIS_72840 73fc2e638c847615105b4465f6f41770 418 SMART SM00919 172 394 1.1E-104 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AMIS_72840 73fc2e638c847615105b4465f6f41770 418 Pfam PF03949 Malic enzyme, NAD binding domain 174 390 4.3E-21 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AMIS_23320 0f699d9e103c1c337d545e33e0581e3d 107 Gene3D G3DSA:3.30.750.24 2 107 2.2E-21 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_23320 0f699d9e103c1c337d545e33e0581e3d 107 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 15 106 2.5E-15 T 14-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 AMIS_23320 0f699d9e103c1c337d545e33e0581e3d 107 SUPERFAMILY SSF52091 9 106 9.16E-17 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_23320 0f699d9e103c1c337d545e33e0581e3d 107 Pfam PF13466 STAS domain 19 102 1.0E-14 T 14-10-2018 IPR002645 STAS domain AMIS_54180 08f6fc847c47e20537e03b77ca3adc8d 332 SUPERFAMILY SSF53448 40 288 2.34E-59 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_54180 08f6fc847c47e20537e03b77ca3adc8d 332 Gene3D G3DSA:3.90.550.10 2 328 4.2E-107 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_54180 08f6fc847c47e20537e03b77ca3adc8d 332 Pfam PF00535 Glycosyl transferase family 2 41 165 4.1E-14 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AMIS_74180 e4d3c20fcc7d38b728b2d753bbaf4389 165 Gene3D G3DSA:1.10.10.10 77 164 3.9E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_74180 e4d3c20fcc7d38b728b2d753bbaf4389 165 SUPERFAMILY SSF46767 84 163 8.11E-23 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 AMIS_74180 e4d3c20fcc7d38b728b2d753bbaf4389 165 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 85 162 1.1E-22 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AMIS_74180 e4d3c20fcc7d38b728b2d753bbaf4389 165 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 84 162 3.8E-25 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AMIS_74180 e4d3c20fcc7d38b728b2d753bbaf4389 165 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 133 139 - T 14-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AMIS_74180 e4d3c20fcc7d38b728b2d753bbaf4389 165 SUPERFAMILY SSF53155 2 73 2.55E-5 T 14-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AMIS_72580 905ea6c372c11e81b0f94b3817e7100e 283 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 2 93 1.2E-5 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AMIS_72580 905ea6c372c11e81b0f94b3817e7100e 283 SUPERFAMILY SSF81624 2 123 5.1E-23 T 14-10-2018 IPR035937 MutM-like, N-terminal AMIS_72580 905ea6c372c11e81b0f94b3817e7100e 283 SUPERFAMILY SSF46946 121 205 3.68E-20 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 AMIS_72580 905ea6c372c11e81b0f94b3817e7100e 283 Gene3D G3DSA:1.10.8.50 124 268 6.7E-38 T 14-10-2018 AMIS_72580 905ea6c372c11e81b0f94b3817e7100e 283 ProSitePatterns PS01242 Zinc finger FPG-type signature. 243 267 - T 14-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 AMIS_72580 905ea6c372c11e81b0f94b3817e7100e 283 Gene3D G3DSA:3.20.190.10 2 120 1.6E-12 T 14-10-2018 IPR035937 MutM-like, N-terminal AMIS_72580 905ea6c372c11e81b0f94b3817e7100e 283 Pfam PF06827 Zinc finger found in FPG and IleRS 240 268 6.3E-7 T 14-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 AMIS_72580 905ea6c372c11e81b0f94b3817e7100e 283 SMART SM01232 122 214 3.7E-26 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AMIS_72580 905ea6c372c11e81b0f94b3817e7100e 283 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 122 207 3.0E-18 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AMIS_72580 905ea6c372c11e81b0f94b3817e7100e 283 SMART SM00898 2 108 7.2E-16 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AMIS_72580 905ea6c372c11e81b0f94b3817e7100e 283 SUPERFAMILY SSF57716 221 268 1.91E-13 T 14-10-2018 AMIS_64200 d690215e9903f66e2b8dab1553d67c3a 293 SUPERFAMILY SSF51679 3 268 8.11E-56 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_64200 d690215e9903f66e2b8dab1553d67c3a 293 Pfam PF00296 Luciferase-like monooxygenase 11 233 3.0E-52 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMIS_64200 d690215e9903f66e2b8dab1553d67c3a 293 Gene3D G3DSA:3.20.20.30 1 284 1.4E-58 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_34760 a367c834429212facb0f7a648cd5e4ad 149 SUPERFAMILY SSF46785 9 146 3.47E-27 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_34760 a367c834429212facb0f7a648cd5e4ad 149 SMART SM00347 31 131 2.7E-16 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_34760 a367c834429212facb0f7a648cd5e4ad 149 Gene3D G3DSA:1.10.10.10 2 148 1.4E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_34760 a367c834429212facb0f7a648cd5e4ad 149 Pfam PF01047 MarR family 39 87 2.4E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_33120 d140c96ae1ae769caaa241a4f9ba072d 132 SMART SM00418 13 91 2.0E-22 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_33120 d140c96ae1ae769caaa241a4f9ba072d 132 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 62 77 3.3E-13 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_33120 d140c96ae1ae769caaa241a4f9ba072d 132 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 15 30 3.3E-13 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_33120 d140c96ae1ae769caaa241a4f9ba072d 132 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 47 62 3.3E-13 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_33120 d140c96ae1ae769caaa241a4f9ba072d 132 SUPERFAMILY SSF46785 9 88 8.68E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_33120 d140c96ae1ae769caaa241a4f9ba072d 132 Pfam PF01022 Bacterial regulatory protein, arsR family 20 66 1.2E-14 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_33120 d140c96ae1ae769caaa241a4f9ba072d 132 Gene3D G3DSA:1.10.10.10 2 97 9.6E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_40660 738743be60e5f456c92599aec2c940a3 327 Pfam PF01944 Stage II sporulation protein M 108 280 3.3E-29 T 14-10-2018 IPR002798 Stage II sporulation protein M-like AMIS_8410 e510e91b1f8bdb041dde98b4ee27c871 351 Gene3D G3DSA:1.10.260.40 4 51 6.2E-15 T 14-10-2018 AMIS_8410 e510e91b1f8bdb041dde98b4ee27c871 351 SUPERFAMILY SSF47413 8 51 3.87E-10 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_8410 e510e91b1f8bdb041dde98b4ee27c871 351 Gene3D G3DSA:3.40.50.2300 163 293 6.7E-70 T 14-10-2018 AMIS_8410 e510e91b1f8bdb041dde98b4ee27c871 351 SMART SM00354 8 74 1.9E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_8410 e510e91b1f8bdb041dde98b4ee27c871 351 Pfam PF00356 Bacterial regulatory proteins, lacI family 10 48 4.5E-11 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_8410 e510e91b1f8bdb041dde98b4ee27c871 351 Gene3D G3DSA:3.40.50.2300 70 314 6.7E-70 T 14-10-2018 AMIS_8410 e510e91b1f8bdb041dde98b4ee27c871 351 SUPERFAMILY SSF53822 70 334 3.73E-66 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_8410 e510e91b1f8bdb041dde98b4ee27c871 351 Pfam PF13377 Periplasmic binding protein-like domain 172 333 7.6E-42 T 14-10-2018 AMIS_56070 4013993885c72fa0b30efbd641f8ec8c 1123 SUPERFAMILY SSF53720 497 921 2.49E-96 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMIS_56070 4013993885c72fa0b30efbd641f8ec8c 1123 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 696 703 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AMIS_56070 4013993885c72fa0b30efbd641f8ec8c 1123 Gene3D G3DSA:3.40.605.10 498 906 5.5E-100 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AMIS_56070 4013993885c72fa0b30efbd641f8ec8c 1123 SUPERFAMILY SSF51730 122 444 2.31E-74 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like AMIS_56070 4013993885c72fa0b30efbd641f8ec8c 1123 Pfam PF00171 Aldehyde dehydrogenase family 501 920 9.5E-96 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AMIS_56070 4013993885c72fa0b30efbd641f8ec8c 1123 PIRSF PIRSF000197 27 1122 6.9E-250 T 14-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AMIS_56070 4013993885c72fa0b30efbd641f8ec8c 1123 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 724 735 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AMIS_56070 4013993885c72fa0b30efbd641f8ec8c 1123 Pfam PF01619 Proline dehydrogenase 123 412 2.5E-63 T 14-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 AMIS_56070 4013993885c72fa0b30efbd641f8ec8c 1123 Gene3D G3DSA:3.20.20.220 58 447 5.6E-108 T 14-10-2018 AMIS_56070 4013993885c72fa0b30efbd641f8ec8c 1123 Gene3D G3DSA:3.40.309.10 700 889 5.5E-100 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AMIS_3860 328c9ed30d1d5deb51c074a7ae311476 155 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 1 154 16.91 T 14-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 AMIS_3860 328c9ed30d1d5deb51c074a7ae311476 155 Gene3D G3DSA:3.90.1140.10 1 155 2.9E-27 T 14-10-2018 AMIS_3860 328c9ed30d1d5deb51c074a7ae311476 155 SUPERFAMILY SSF55144 3 154 1.52E-25 T 14-10-2018 IPR009097 Cyclic phosphodiesterase AMIS_3860 328c9ed30d1d5deb51c074a7ae311476 155 Pfam PF13563 2'-5' RNA ligase superfamily 26 143 4.8E-12 T 14-10-2018 AMIS_38320 79166658126a288ca09acabc435cf816 138 SUPERFAMILY SSF46785 6 137 3.29E-32 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_38320 79166658126a288ca09acabc435cf816 138 SMART SM00347 26 126 4.6E-21 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_38320 79166658126a288ca09acabc435cf816 138 Pfam PF01047 MarR family 34 90 5.2E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_38320 79166658126a288ca09acabc435cf816 138 Gene3D G3DSA:1.10.10.10 2 138 3.4E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_38320 79166658126a288ca09acabc435cf816 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 67 82 1.0E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_38320 79166658126a288ca09acabc435cf816 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 102 1.0E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_38320 79166658126a288ca09acabc435cf816 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 116 136 1.0E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_51990 e6416b5a68218f601afe28ad3c88b5fb 403 Pfam PF13439 Glycosyltransferase Family 4 23 186 2.1E-31 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AMIS_51990 e6416b5a68218f601afe28ad3c88b5fb 403 Gene3D G3DSA:3.40.50.2000 14 399 2.3E-81 T 14-10-2018 AMIS_51990 e6416b5a68218f601afe28ad3c88b5fb 403 Pfam PF00534 Glycosyl transferases group 1 200 380 9.5E-29 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 AMIS_51990 e6416b5a68218f601afe28ad3c88b5fb 403 SUPERFAMILY SSF53756 15 403 1.54E-82 T 14-10-2018 AMIS_51990 e6416b5a68218f601afe28ad3c88b5fb 403 TIGRFAM TIGR02149 glgA_Coryne: glycogen synthase, Corynebacterium family 9 403 4.1E-175 T 14-10-2018 IPR011875 Alpha-maltose-1-phosphate synthase GO:0009250|GO:0016740 KEGG: 00500+2.4.1.342|MetaCyc: PWY-7900 AMIS_51990 e6416b5a68218f601afe28ad3c88b5fb 403 Gene3D G3DSA:3.40.50.2000 183 382 2.3E-81 T 14-10-2018 AMIS_710 7de8b7b98070d2b8d16f917dd3a996f0 276 SUPERFAMILY SSF50891 169 274 3.3E-14 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily AMIS_710 7de8b7b98070d2b8d16f917dd3a996f0 276 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 24 273 2.6E-78 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B AMIS_710 7de8b7b98070d2b8d16f917dd3a996f0 276 SMART SM00797 23 276 2.5E-86 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B AMIS_710 7de8b7b98070d2b8d16f917dd3a996f0 276 Gene3D G3DSA:2.40.100.10 167 275 1.5E-37 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily AMIS_710 7de8b7b98070d2b8d16f917dd3a996f0 276 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 2 274 4.2E-75 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B AMIS_26330 07d033e093a017b3b486d8e2d5cc2abd 877 PIRSF PIRSF010631 1 876 1.0E-277 T 14-10-2018 IPR016007 Alpha-L-rhamnosidase AMIS_26330 07d033e093a017b3b486d8e2d5cc2abd 877 Pfam PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain 332 428 5.6E-29 T 14-10-2018 IPR008902 Alpha-L-rhamnosidase, concanavalin-like domain AMIS_26330 07d033e093a017b3b486d8e2d5cc2abd 877 Pfam PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain 775 844 8.9E-13 T 14-10-2018 IPR035398 Alpha-L-rhamnosidase C-terminal domain AMIS_26330 07d033e093a017b3b486d8e2d5cc2abd 877 Pfam PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain 434 767 3.8E-117 T 14-10-2018 IPR035396 Alpha-L-rhamnosidase, six-hairpin glycosidase domain AMIS_26330 07d033e093a017b3b486d8e2d5cc2abd 877 Gene3D G3DSA:2.60.40.10 1 109 3.8E-30 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_26330 07d033e093a017b3b486d8e2d5cc2abd 877 Pfam PF08531 Alpha-L-rhamnosidase N-terminal domain 161 295 1.1E-46 T 14-10-2018 IPR013737 Bacterial alpha-L-rhamnosidase N-terminal AMIS_26330 07d033e093a017b3b486d8e2d5cc2abd 877 Gene3D G3DSA:1.50.10.10 110 877 4.1E-276 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 AMIS_26330 07d033e093a017b3b486d8e2d5cc2abd 877 SUPERFAMILY SSF48208 434 845 7.48E-35 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AMIS_6870 0e9d16f3c6f57d58faeb1184ae0fe8b3 488 Pfam PF00174 Oxidoreductase molybdopterin binding domain 216 361 3.1E-37 T 14-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 AMIS_6870 0e9d16f3c6f57d58faeb1184ae0fe8b3 488 Gene3D G3DSA:3.90.420.10 182 377 7.7E-47 T 14-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 AMIS_6870 0e9d16f3c6f57d58faeb1184ae0fe8b3 488 SUPERFAMILY SSF56524 199 385 3.14E-55 T 14-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 AMIS_6870 0e9d16f3c6f57d58faeb1184ae0fe8b3 488 SUPERFAMILY SSF81296 378 487 6.23E-23 T 14-10-2018 IPR014756 Immunoglobulin E-set AMIS_6870 0e9d16f3c6f57d58faeb1184ae0fe8b3 488 Gene3D G3DSA:2.60.40.650 378 488 3.5E-24 T 14-10-2018 AMIS_4320 1dadd24983b2aebd7b6d2ae6b04d92be 120 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 10 110 16.018 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AMIS_4320 1dadd24983b2aebd7b6d2ae6b04d92be 120 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 12 105 5.9E-18 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AMIS_35750 c12c22b47caf947c2b0f32ea23b00365 257 Gene3D G3DSA:3.90.1200.10 80 195 2.2E-7 T 14-10-2018 AMIS_35750 c12c22b47caf947c2b0f32ea23b00365 257 SUPERFAMILY SSF56112 19 196 6.12E-22 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMIS_35750 c12c22b47caf947c2b0f32ea23b00365 257 Pfam PF01636 Phosphotransferase enzyme family 121 177 1.2E-8 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase AMIS_35750 c12c22b47caf947c2b0f32ea23b00365 257 Pfam PF01636 Phosphotransferase enzyme family 26 108 1.4E-5 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase AMIS_44800 804d0b3e2bcdeeca43b4c357834d55d0 403 SMART SM00387 306 399 8.1E-6 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_44800 804d0b3e2bcdeeca43b4c357834d55d0 403 Pfam PF07730 Histidine kinase 202 268 2.1E-17 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMIS_44800 804d0b3e2bcdeeca43b4c357834d55d0 403 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 396 7.4E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_44800 804d0b3e2bcdeeca43b4c357834d55d0 403 PRINTS PR00344 Bacterial sensor protein C-terminal signature 342 356 7.4E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_44800 804d0b3e2bcdeeca43b4c357834d55d0 403 PRINTS PR00344 Bacterial sensor protein C-terminal signature 359 377 7.4E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_44800 804d0b3e2bcdeeca43b4c357834d55d0 403 SUPERFAMILY SSF55874 273 396 5.07E-18 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_44800 804d0b3e2bcdeeca43b4c357834d55d0 403 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 311 397 8.7E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_44800 804d0b3e2bcdeeca43b4c357834d55d0 403 Gene3D G3DSA:3.30.565.10 272 398 1.2E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_44800 804d0b3e2bcdeeca43b4c357834d55d0 403 PIRSF PIRSF037434 9 402 1.3E-77 T 14-10-2018 IPR017205 Signal transduction histidine kinase, ChrS AMIS_25500 10cbbc0a0430c17dd3480983022a84fa 489 Gene3D G3DSA:1.20.1250.20 287 487 1.3E-14 T 14-10-2018 AMIS_25500 10cbbc0a0430c17dd3480983022a84fa 489 Pfam PF07690 Major Facilitator Superfamily 31 431 4.0E-40 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_25500 10cbbc0a0430c17dd3480983022a84fa 489 PRINTS PR01035 Tetracycline resistance protein signature 152 174 3.2E-7 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMIS_25500 10cbbc0a0430c17dd3480983022a84fa 489 PRINTS PR01035 Tetracycline resistance protein signature 94 118 3.2E-7 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMIS_25500 10cbbc0a0430c17dd3480983022a84fa 489 PRINTS PR01035 Tetracycline resistance protein signature 37 53 3.2E-7 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMIS_25500 10cbbc0a0430c17dd3480983022a84fa 489 SUPERFAMILY SSF103473 26 480 2.01E-56 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_25500 10cbbc0a0430c17dd3480983022a84fa 489 Gene3D G3DSA:1.20.1720.10 27 238 3.6E-53 T 14-10-2018 AMIS_32010 de64ce7c2d0f84a28ce73555f2fb65d5 327 SUPERFAMILY SSF52540 3 253 5.09E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_32010 de64ce7c2d0f84a28ce73555f2fb65d5 327 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_32010 de64ce7c2d0f84a28ce73555f2fb65d5 327 Gene3D G3DSA:3.40.50.300 1 324 7.3E-91 T 14-10-2018 AMIS_32010 de64ce7c2d0f84a28ce73555f2fb65d5 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 234 299 8.9E-17 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMIS_32010 de64ce7c2d0f84a28ce73555f2fb65d5 327 Pfam PF00005 ABC transporter 25 182 3.7E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_32010 de64ce7c2d0f84a28ce73555f2fb65d5 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 318 2.3E-18 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMIS_32010 de64ce7c2d0f84a28ce73555f2fb65d5 327 SMART SM00382 33 231 1.2E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_74660 5ab69eb119f166daa67ee0cbe887942c 1170 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 805 1162 1.2E-106 T 14-10-2018 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 AMIS_74660 5ab69eb119f166daa67ee0cbe887942c 1170 SUPERFAMILY SSF53448 5 212 2.91E-51 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_74660 5ab69eb119f166daa67ee0cbe887942c 1170 Gene3D G3DSA:3.40.50.12580 968 1150 3.2E-121 T 14-10-2018 AMIS_74660 5ab69eb119f166daa67ee0cbe887942c 1170 SUPERFAMILY SSF53756 925 1163 7.85E-19 T 14-10-2018 AMIS_74660 5ab69eb119f166daa67ee0cbe887942c 1170 Gene3D G3DSA:3.90.550.10 4 200 1.6E-49 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_74660 5ab69eb119f166daa67ee0cbe887942c 1170 Pfam PF00535 Glycosyl transferase family 2 6 134 5.9E-36 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AMIS_74660 5ab69eb119f166daa67ee0cbe887942c 1170 Gene3D G3DSA:3.40.50.11820 806 1157 3.2E-121 T 14-10-2018 AMIS_6520 e17e19ae939e7120bce89795d23c505f 135 SMART SM00960 11 101 4.7E-28 T 14-10-2018 IPR004942 Roadblock/LAMTOR2 domain AMIS_6520 e17e19ae939e7120bce89795d23c505f 135 Pfam PF03259 Roadblock/LC7 domain 11 101 6.3E-22 T 14-10-2018 IPR004942 Roadblock/LAMTOR2 domain AMIS_6520 e17e19ae939e7120bce89795d23c505f 135 Gene3D G3DSA:3.30.450.30 7 132 1.7E-41 T 14-10-2018 AMIS_6520 e17e19ae939e7120bce89795d23c505f 135 SUPERFAMILY SSF103196 4 130 1.62E-33 T 14-10-2018 AMIS_67970 96eda284d9d46431bf02156c4161e082 356 Gene3D G3DSA:3.30.70.260 14 84 1.9E-5 T 14-10-2018 AMIS_67970 96eda284d9d46431bf02156c4161e082 356 Gene3D G3DSA:3.40.630.30 191 353 9.2E-32 T 14-10-2018 AMIS_67970 96eda284d9d46431bf02156c4161e082 356 SUPERFAMILY SSF55021 11 74 1.08E-7 T 14-10-2018 AMIS_67970 96eda284d9d46431bf02156c4161e082 356 SUPERFAMILY SSF55729 196 329 2.57E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_67970 96eda284d9d46431bf02156c4161e082 356 Pfam PF00583 Acetyltransferase (GNAT) family 247 329 8.9E-6 T 14-10-2018 IPR000182 GNAT domain AMIS_36500 c05d865dc63982e8c934356e27a2d544 267 SUPERFAMILY SSF161098 62 246 7.72E-22 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_36500 c05d865dc63982e8c934356e27a2d544 267 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 248 3.1E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_36500 c05d865dc63982e8c934356e27a2d544 267 Gene3D G3DSA:1.10.3720.10 60 254 1.5E-17 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_13740 a897a761cfe5b3f70990b75101c7714c 1309 Gene3D G3DSA:3.40.50.300 1076 1306 4.5E-56 T 14-10-2018 AMIS_13740 a897a761cfe5b3f70990b75101c7714c 1309 SUPERFAMILY SSF52540 1061 1237 1.37E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_13740 a897a761cfe5b3f70990b75101c7714c 1309 Pfam PF01580 FtsK/SpoIIIE family 1095 1144 2.0E-6 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 AMIS_13740 a897a761cfe5b3f70990b75101c7714c 1309 Pfam PF01580 FtsK/SpoIIIE family 439 562 2.0E-24 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 AMIS_13740 a897a761cfe5b3f70990b75101c7714c 1309 Pfam PF01580 FtsK/SpoIIIE family 801 1032 2.6E-53 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 AMIS_13740 a897a761cfe5b3f70990b75101c7714c 1309 SUPERFAMILY SSF52540 430 691 3.62E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_13740 a897a761cfe5b3f70990b75101c7714c 1309 SMART SM00382 1102 1262 4.3 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_13740 a897a761cfe5b3f70990b75101c7714c 1309 SMART SM00382 819 995 0.16 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_13740 a897a761cfe5b3f70990b75101c7714c 1309 SMART SM00382 467 647 0.0082 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_13740 a897a761cfe5b3f70990b75101c7714c 1309 Gene3D G3DSA:3.40.50.300 762 1069 1.5E-91 T 14-10-2018 AMIS_13740 a897a761cfe5b3f70990b75101c7714c 1309 Gene3D G3DSA:3.40.50.300 193 341 3.9E-7 T 14-10-2018 AMIS_13740 a897a761cfe5b3f70990b75101c7714c 1309 TIGRFAM TIGR03925 T7SS_EccC_b: type VII secretion protein EccCb 738 1303 1.5E-229 T 14-10-2018 IPR023837 EccCb-like, Actinobacteria AMIS_13740 a897a761cfe5b3f70990b75101c7714c 1309 SUPERFAMILY SSF52540 773 1001 1.13E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_13740 a897a761cfe5b3f70990b75101c7714c 1309 TIGRFAM TIGR03924 T7SS_EccC_a: type VII secretion protein EccCa 24 691 6.6E-258 T 14-10-2018 IPR023836 EccCa-like, Actinobacteria AMIS_76400 62bed9d107f6159ce07f1ed16ed2db40 247 PRINTS PR00956 Flagellar motor switch protein FliN signature 172 188 8.3E-27 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AMIS_76400 62bed9d107f6159ce07f1ed16ed2db40 247 PRINTS PR00956 Flagellar motor switch protein FliN signature 189 205 8.3E-27 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AMIS_76400 62bed9d107f6159ce07f1ed16ed2db40 247 PRINTS PR00956 Flagellar motor switch protein FliN signature 205 218 8.3E-27 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AMIS_76400 62bed9d107f6159ce07f1ed16ed2db40 247 PRINTS PR00956 Flagellar motor switch protein FliN signature 218 233 8.3E-27 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AMIS_76400 62bed9d107f6159ce07f1ed16ed2db40 247 SUPERFAMILY SSF101801 170 245 9.29E-24 T 14-10-2018 IPR036429 SpoA-like superfamily AMIS_76400 62bed9d107f6159ce07f1ed16ed2db40 247 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 172 242 3.7E-27 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) AMIS_76400 62bed9d107f6159ce07f1ed16ed2db40 247 Gene3D G3DSA:2.30.330.10 166 247 1.8E-33 T 14-10-2018 IPR036429 SpoA-like superfamily AMIS_76400 62bed9d107f6159ce07f1ed16ed2db40 247 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 170 243 2.6E-30 T 14-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 AMIS_7050 421e505e56928f17f5ae81f6170fac75 545 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 465 8.9E-62 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain AMIS_7050 421e505e56928f17f5ae81f6170fac75 545 PIRSF PIRSF002741 4 545 5.9E-82 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AMIS_7050 421e505e56928f17f5ae81f6170fac75 545 SUPERFAMILY SSF53850 41 541 1.19E-101 T 14-10-2018 AMIS_7050 421e505e56928f17f5ae81f6170fac75 545 Gene3D G3DSA:3.90.76.10 67 202 3.7E-106 T 14-10-2018 AMIS_7050 421e505e56928f17f5ae81f6170fac75 545 Gene3D G3DSA:3.40.190.10 46 530 3.7E-106 T 14-10-2018 AMIS_7050 421e505e56928f17f5ae81f6170fac75 545 Gene3D G3DSA:3.10.105.10 306 517 3.7E-106 T 14-10-2018 AMIS_35970 35c4442f317f1b755a004f5d44b8e1cc 304 Gene3D G3DSA:1.10.10.2730 246 287 6.2E-12 T 14-10-2018 AMIS_35970 35c4442f317f1b755a004f5d44b8e1cc 304 Gene3D G3DSA:2.60.120.10 15 90 3.2E-6 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMIS_35970 35c4442f317f1b755a004f5d44b8e1cc 304 Pfam PF12833 Helix-turn-helix domain 210 288 2.1E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMIS_35970 35c4442f317f1b755a004f5d44b8e1cc 304 Gene3D G3DSA:1.10.10.60 189 245 9.6E-13 T 14-10-2018 AMIS_35970 35c4442f317f1b755a004f5d44b8e1cc 304 SUPERFAMILY SSF51215 22 109 4.18E-10 T 14-10-2018 IPR037923 Transcription regulator HTH-like AMIS_35970 35c4442f317f1b755a004f5d44b8e1cc 304 SUPERFAMILY SSF46689 241 288 2.21E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_35970 35c4442f317f1b755a004f5d44b8e1cc 304 SUPERFAMILY SSF46689 190 237 5.47E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_35970 35c4442f317f1b755a004f5d44b8e1cc 304 Pfam PF02311 AraC-like ligand binding domain 31 107 2.8E-8 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AMIS_35970 35c4442f317f1b755a004f5d44b8e1cc 304 SMART SM00342 204 287 6.6E-30 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMIS_30480 03730a3f52808bfd823a480d00781c8c 657 SUPERFAMILY SSF55073 232 386 1.88E-46 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_30480 03730a3f52808bfd823a480d00781c8c 657 SMART SM00052 397 642 7.2E-105 T 14-10-2018 IPR001633 EAL domain AMIS_30480 03730a3f52808bfd823a480d00781c8c 657 Gene3D G3DSA:3.20.20.450 398 650 7.6E-99 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_30480 03730a3f52808bfd823a480d00781c8c 657 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 226 380 9.1E-43 T 14-10-2018 IPR000160 GGDEF domain AMIS_30480 03730a3f52808bfd823a480d00781c8c 657 Pfam PF00563 EAL domain 403 637 8.5E-75 T 14-10-2018 IPR001633 EAL domain AMIS_30480 03730a3f52808bfd823a480d00781c8c 657 Pfam PF00990 Diguanylate cyclase, GGDEF domain 227 381 2.2E-46 T 14-10-2018 IPR000160 GGDEF domain AMIS_30480 03730a3f52808bfd823a480d00781c8c 657 Gene3D G3DSA:3.30.70.270 222 388 1.1E-53 T 14-10-2018 AMIS_30480 03730a3f52808bfd823a480d00781c8c 657 SMART SM00267 217 387 2.8E-56 T 14-10-2018 IPR000160 GGDEF domain AMIS_30480 03730a3f52808bfd823a480d00781c8c 657 SUPERFAMILY SSF141868 403 648 1.57E-88 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_68010 a2251a439f77f3096d94ba9f3e0875d4 390 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 154 354 22.78 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AMIS_68010 a2251a439f77f3096d94ba9f3e0875d4 390 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 158 320 1.8E-35 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AMIS_68010 a2251a439f77f3096d94ba9f3e0875d4 390 Pfam PF13500 AAA domain 157 354 7.7E-29 T 14-10-2018 AMIS_68010 a2251a439f77f3096d94ba9f3e0875d4 390 SUPERFAMILY SSF52540 156 334 2.38E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_68010 a2251a439f77f3096d94ba9f3e0875d4 390 Gene3D G3DSA:3.40.50.300 155 379 8.4E-51 T 14-10-2018 AMIS_16650 5b269df7417bbf5c417967e1160c19be 336 Pfam PF01882 Protein of unknown function DUF58 49 132 1.6E-17 T 14-10-2018 IPR002881 Domain of unknown function DUF58 AMIS_8260 05e17c7d5e85bb65873cf878b7bd7f2f 298 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 108 282 3.7E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_8260 05e17c7d5e85bb65873cf878b7bd7f2f 298 Gene3D G3DSA:1.10.3720.10 21 285 5.7E-50 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_8260 05e17c7d5e85bb65873cf878b7bd7f2f 298 SUPERFAMILY SSF161098 25 298 4.97E-57 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_76880 b833e58753fe56e04406d69aad652f3a 258 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 5 258 1.9E-113 T 14-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 AMIS_76880 b833e58753fe56e04406d69aad652f3a 258 SMART SM00382 29 245 2.8E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_76880 b833e58753fe56e04406d69aad652f3a 258 Gene3D G3DSA:3.40.50.300 2 256 7.3E-61 T 14-10-2018 AMIS_76880 b833e58753fe56e04406d69aad652f3a 258 Pfam PF00005 ABC transporter 21 176 3.0E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_76880 b833e58753fe56e04406d69aad652f3a 258 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_76880 b833e58753fe56e04406d69aad652f3a 258 SUPERFAMILY SSF52540 5 245 8.95E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_46920 d7a6aac879bfea4ca91467a8cd56a506 463 Pfam PF02417 Chromate transporter 263 452 4.8E-31 T 14-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 AMIS_46920 d7a6aac879bfea4ca91467a8cd56a506 463 Pfam PF02417 Chromate transporter 26 187 2.2E-32 T 14-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 AMIS_46920 d7a6aac879bfea4ca91467a8cd56a506 463 TIGRFAM TIGR00937 2A51: chromate efflux transporter 33 403 2.1E-62 T 14-10-2018 IPR014047 Chromate transporter, long chain AMIS_46920 d7a6aac879bfea4ca91467a8cd56a506 463 PIRSF PIRSF004810 7 459 2.1E-118 T 14-10-2018 IPR014047 Chromate transporter, long chain AMIS_34640 ec743767ce4ca1201e1d28f14edfb87f 245 Pfam PF02754 Cysteine-rich domain 136 220 1.2E-14 T 14-10-2018 IPR004017 Cysteine-rich domain AMIS_34640 ec743767ce4ca1201e1d28f14edfb87f 245 Pfam PF02754 Cysteine-rich domain 5 85 3.5E-15 T 14-10-2018 IPR004017 Cysteine-rich domain AMIS_25070 e364fa6549581de28d3b8318635b1e1f 317 Pfam PF01497 Periplasmic binding protein 51 290 1.4E-22 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain AMIS_25070 e364fa6549581de28d3b8318635b1e1f 317 Gene3D G3DSA:3.40.50.1980 150 317 2.0E-52 T 14-10-2018 AMIS_25070 e364fa6549581de28d3b8318635b1e1f 317 Gene3D G3DSA:3.40.50.1980 18 149 7.6E-43 T 14-10-2018 AMIS_25070 e364fa6549581de28d3b8318635b1e1f 317 SUPERFAMILY SSF53807 34 312 7.46E-39 T 14-10-2018 AMIS_44740 c77dbd78c708be564a48d53400c03881 69 Gene3D G3DSA:3.40.50.300 12 67 2.2E-10 T 14-10-2018 AMIS_44740 c77dbd78c708be564a48d53400c03881 69 Pfam PF00005 ABC transporter 22 56 2.3E-7 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_44740 c77dbd78c708be564a48d53400c03881 69 SUPERFAMILY SSF52540 20 55 1.48E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_14880 4b59b3d028952679decba83d7fe0da90 247 Gene3D G3DSA:3.40.50.150 39 231 2.9E-40 T 14-10-2018 AMIS_14880 4b59b3d028952679decba83d7fe0da90 247 Gene3D G3DSA:2.20.25.570 140 203 2.9E-40 T 14-10-2018 AMIS_14880 4b59b3d028952679decba83d7fe0da90 247 SUPERFAMILY SSF53335 15 229 1.51E-35 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_14880 4b59b3d028952679decba83d7fe0da90 247 Pfam PF13649 Methyltransferase domain 40 132 1.7E-16 T 14-10-2018 AMIS_79110 e4ee7cd15ffb8d084ebc732daf87b6ef 290 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 160 4.5E-39 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 AMIS_79110 e4ee7cd15ffb8d084ebc732daf87b6ef 290 SUPERFAMILY SSF51735 3 160 6.72E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_79110 e4ee7cd15ffb8d084ebc732daf87b6ef 290 Gene3D G3DSA:1.10.1040.10 163 287 6.5E-26 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AMIS_79110 e4ee7cd15ffb8d084ebc732daf87b6ef 290 Gene3D G3DSA:3.40.50.720 1 161 5.5E-43 T 14-10-2018 AMIS_79110 e4ee7cd15ffb8d084ebc732daf87b6ef 290 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 166 283 3.3E-15 T 14-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 AMIS_79110 e4ee7cd15ffb8d084ebc732daf87b6ef 290 SUPERFAMILY SSF48179 165 284 2.61E-22 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMIS_79110 e4ee7cd15ffb8d084ebc732daf87b6ef 290 PIRSF PIRSF000103 1 288 2.9E-81 T 14-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 AMIS_18580 f423839bd596afa96ced6ad45a4e7780 964 Pfam PF00486 Transcriptional regulatory protein, C terminal 35 84 1.2E-4 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_18580 f423839bd596afa96ced6ad45a4e7780 964 Gene3D G3DSA:1.25.40.10 133 304 1.3E-34 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_18580 f423839bd596afa96ced6ad45a4e7780 964 Gene3D G3DSA:1.25.40.10 677 908 5.8E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_18580 f423839bd596afa96ced6ad45a4e7780 964 SMART SM00862 24 96 1.1E-13 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_18580 f423839bd596afa96ced6ad45a4e7780 964 SUPERFAMILY SSF48452 134 285 1.44E-23 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_18580 f423839bd596afa96ced6ad45a4e7780 964 SMART SM01043 134 275 2.4E-33 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain AMIS_18580 f423839bd596afa96ced6ad45a4e7780 964 Pfam PF03704 Bacterial transcriptional activator domain 134 275 1.3E-26 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain AMIS_18580 f423839bd596afa96ced6ad45a4e7780 964 SUPERFAMILY SSF52540 278 529 7.91E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_18580 f423839bd596afa96ced6ad45a4e7780 964 SUPERFAMILY SSF46894 12 96 4.25E-10 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_18580 f423839bd596afa96ced6ad45a4e7780 964 Gene3D G3DSA:1.10.10.10 4 98 1.6E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_66450 695646ced32552a78187725208c9e5d7 371 Pfam PF00534 Glycosyl transferases group 1 192 331 1.6E-22 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 AMIS_66450 695646ced32552a78187725208c9e5d7 371 SUPERFAMILY SSF53756 4 359 1.73E-72 T 14-10-2018 AMIS_66450 695646ced32552a78187725208c9e5d7 371 Pfam PF13439 Glycosyltransferase Family 4 14 175 1.6E-30 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AMIS_66450 695646ced32552a78187725208c9e5d7 371 Gene3D G3DSA:3.40.50.2000 183 340 3.3E-31 T 14-10-2018 AMIS_66450 695646ced32552a78187725208c9e5d7 371 Gene3D G3DSA:3.40.50.2000 1 180 2.3E-36 T 14-10-2018 AMIS_43000 c761875002e2e92f2dd20149d574c64f 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 185 8.8E-5 T 14-10-2018 AMIS_43000 c761875002e2e92f2dd20149d574c64f 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 1.2E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_43000 c761875002e2e92f2dd20149d574c64f 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.2E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_43000 c761875002e2e92f2dd20149d574c64f 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 1.2E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_43000 c761875002e2e92f2dd20149d574c64f 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.2E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_43000 c761875002e2e92f2dd20149d574c64f 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.2E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_43000 c761875002e2e92f2dd20149d574c64f 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.2E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_43000 c761875002e2e92f2dd20149d574c64f 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 1.2E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_43000 c761875002e2e92f2dd20149d574c64f 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 1.2E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_43000 c761875002e2e92f2dd20149d574c64f 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.2E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_43000 c761875002e2e92f2dd20149d574c64f 245 Gene3D G3DSA:3.40.50.720 1 245 2.6E-71 T 14-10-2018 AMIS_43000 c761875002e2e92f2dd20149d574c64f 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 244 7.9E-55 T 14-10-2018 AMIS_43000 c761875002e2e92f2dd20149d574c64f 245 SUPERFAMILY SSF51735 5 244 4.53E-72 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_15270 6a4fe1677640dbb1677a4d5c980630ae 236 Gene3D G3DSA:3.20.20.10 1 235 1.3E-72 T 14-10-2018 IPR029066 PLP-binding barrel AMIS_15270 6a4fe1677640dbb1677a4d5c980630ae 236 SUPERFAMILY SSF51419 8 230 1.96E-64 T 14-10-2018 IPR029066 PLP-binding barrel AMIS_15270 6a4fe1677640dbb1677a4d5c980630ae 236 PIRSF PIRSF004848 5 236 1.3E-63 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 AMIS_15270 6a4fe1677640dbb1677a4d5c980630ae 236 Pfam PF01168 Alanine racemase, N-terminal domain 19 232 4.7E-20 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMIS_15270 6a4fe1677640dbb1677a4d5c980630ae 236 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 13 231 26.974 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 AMIS_15270 6a4fe1677640dbb1677a4d5c980630ae 236 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 85 99 - T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 AMIS_15270 6a4fe1677640dbb1677a4d5c980630ae 236 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 13 232 9.9E-43 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 AMIS_44110 612edf8f30e5cd06828518c7f6cbf015 532 SMART SM00304 217 269 1.4E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_44110 612edf8f30e5cd06828518c7f6cbf015 532 Pfam PF12729 Four helix bundle sensory module for signal transduction 8 136 4.2E-10 T 14-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain AMIS_44110 612edf8f30e5cd06828518c7f6cbf015 532 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 337 501 1.8E-30 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_44110 612edf8f30e5cd06828518c7f6cbf015 532 Gene3D G3DSA:1.10.287.950 217 532 9.6E-62 T 14-10-2018 AMIS_44110 612edf8f30e5cd06828518c7f6cbf015 532 SMART SM00283 284 531 3.0E-48 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_44110 612edf8f30e5cd06828518c7f6cbf015 532 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 8 33 6.6E-19 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_44110 612edf8f30e5cd06828518c7f6cbf015 532 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 375 402 6.6E-19 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_44110 612edf8f30e5cd06828518c7f6cbf015 532 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 404 433 6.6E-19 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_44110 612edf8f30e5cd06828518c7f6cbf015 532 SUPERFAMILY SSF58104 237 530 3.14E-61 T 14-10-2018 AMIS_35360 b4162ed5ab431dddbef939313d3375f6 218 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 24 214 2.9E-30 T 14-10-2018 IPR006214 Bax inhibitor 1-related AMIS_23180 f48cff60d427702aa94bd7bf2f558810 339 SUPERFAMILY SSF46785 1 110 2.28E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_23180 f48cff60d427702aa94bd7bf2f558810 339 Gene3D G3DSA:3.40.190.10 134 272 1.4E-25 T 14-10-2018 AMIS_23180 f48cff60d427702aa94bd7bf2f558810 339 Gene3D G3DSA:3.40.190.10 163 263 1.4E-25 T 14-10-2018 AMIS_23180 f48cff60d427702aa94bd7bf2f558810 339 SUPERFAMILY SSF53850 92 290 4.96E-26 T 14-10-2018 AMIS_23180 f48cff60d427702aa94bd7bf2f558810 339 Gene3D G3DSA:1.10.10.10 1 87 3.9E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_23180 f48cff60d427702aa94bd7bf2f558810 339 Pfam PF03466 LysR substrate binding domain 93 286 7.3E-24 T 14-10-2018 IPR005119 LysR, substrate-binding AMIS_23180 f48cff60d427702aa94bd7bf2f558810 339 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.2E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_53130 687e565ae9fbece128fd1a482cbc15e3 315 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 145 306 3.8E-53 T 14-10-2018 IPR000160 GGDEF domain AMIS_53130 687e565ae9fbece128fd1a482cbc15e3 315 Gene3D G3DSA:3.30.70.270 142 311 8.5E-59 T 14-10-2018 AMIS_53130 687e565ae9fbece128fd1a482cbc15e3 315 SUPERFAMILY SSF55073 151 305 5.81E-49 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_53130 687e565ae9fbece128fd1a482cbc15e3 315 Pfam PF00990 Diguanylate cyclase, GGDEF domain 146 303 5.7E-49 T 14-10-2018 IPR000160 GGDEF domain AMIS_53130 687e565ae9fbece128fd1a482cbc15e3 315 SMART SM00267 135 307 1.7E-61 T 14-10-2018 IPR000160 GGDEF domain AMIS_2150 66857c39ed191a012ed08d0e4cd050f6 189 Pfam PF12840 Helix-turn-helix domain 16 69 1.9E-11 T 14-10-2018 AMIS_2150 66857c39ed191a012ed08d0e4cd050f6 189 SUPERFAMILY SSF46785 9 90 2.43E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_2150 66857c39ed191a012ed08d0e4cd050f6 189 SMART SM00418 13 102 8.4E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_2150 66857c39ed191a012ed08d0e4cd050f6 189 Gene3D G3DSA:1.10.10.10 10 108 2.1E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_39050 4893873307f46985cadecfff891c4ad3 198 Gene3D G3DSA:1.10.357.10 63 194 5.1E-14 T 14-10-2018 AMIS_39050 4893873307f46985cadecfff891c4ad3 198 SUPERFAMILY SSF46689 15 78 2.79E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_39050 4893873307f46985cadecfff891c4ad3 198 ProSitePatterns PS01081 TetR-type HTH domain signature. 36 67 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMIS_39050 4893873307f46985cadecfff891c4ad3 198 Gene3D G3DSA:1.10.10.60 14 62 2.2E-16 T 14-10-2018 AMIS_39050 4893873307f46985cadecfff891c4ad3 198 SUPERFAMILY SSF48498 82 193 3.93E-11 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_39050 4893873307f46985cadecfff891c4ad3 198 Pfam PF16859 Bacterial transcriptional repressor C-terminal 82 187 1.9E-12 T 14-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AMIS_39050 4893873307f46985cadecfff891c4ad3 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 30 69 2.4E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_24010 e15a6b948cb1e3f8ab9269e4b3f8226d 731 SUPERFAMILY SSF82866 499 714 7.98E-27 T 14-10-2018 AMIS_24010 e15a6b948cb1e3f8ab9269e4b3f8226d 731 Pfam PF03176 MMPL family 458 714 2.5E-33 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 AMIS_24010 e15a6b948cb1e3f8ab9269e4b3f8226d 731 Pfam PF03176 MMPL family 54 390 1.4E-57 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 AMIS_24010 e15a6b948cb1e3f8ab9269e4b3f8226d 731 SUPERFAMILY SSF82866 125 352 4.45E-30 T 14-10-2018 AMIS_24010 e15a6b948cb1e3f8ab9269e4b3f8226d 731 Gene3D G3DSA:1.20.1640.10 185 364 3.5E-6 T 14-10-2018 AMIS_50360 be37beba375cca6b1ced1e54c075a592 258 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 232 3.2E-42 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AMIS_50360 be37beba375cca6b1ced1e54c075a592 258 Gene3D G3DSA:3.90.226.10 2 224 8.1E-47 T 14-10-2018 AMIS_50360 be37beba375cca6b1ced1e54c075a592 258 SUPERFAMILY SSF52096 5 250 1.34E-43 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMIS_48730 332e7f180f3f1e6db17ca696d177e138 488 Gene3D G3DSA:3.30.565.10 311 486 1.2E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_48730 332e7f180f3f1e6db17ca696d177e138 488 Pfam PF00672 HAMP domain 182 231 2.3E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_48730 332e7f180f3f1e6db17ca696d177e138 488 SMART SM00387 353 485 8.4E-36 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_48730 332e7f180f3f1e6db17ca696d177e138 488 Gene3D G3DSA:1.20.1480.50 143 238 2.7E-6 T 14-10-2018 AMIS_48730 332e7f180f3f1e6db17ca696d177e138 488 SMART SM00388 243 310 3.0E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_48730 332e7f180f3f1e6db17ca696d177e138 488 SUPERFAMILY SSF158472 184 231 9.15E-7 T 14-10-2018 AMIS_48730 332e7f180f3f1e6db17ca696d177e138 488 Gene3D G3DSA:1.10.287.130 239 310 1.2E-21 T 14-10-2018 AMIS_48730 332e7f180f3f1e6db17ca696d177e138 488 SUPERFAMILY SSF55874 299 483 2.62E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_48730 332e7f180f3f1e6db17ca696d177e138 488 Pfam PF00512 His Kinase A (phospho-acceptor) domain 244 309 3.0E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_48730 332e7f180f3f1e6db17ca696d177e138 488 SMART SM00304 182 235 6.0E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_48730 332e7f180f3f1e6db17ca696d177e138 488 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 463 9.8E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_48730 332e7f180f3f1e6db17ca696d177e138 488 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 423 9.8E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_48730 332e7f180f3f1e6db17ca696d177e138 488 PRINTS PR00344 Bacterial sensor protein C-terminal signature 469 482 9.8E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_48730 332e7f180f3f1e6db17ca696d177e138 488 PRINTS PR00344 Bacterial sensor protein C-terminal signature 427 437 9.8E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_48730 332e7f180f3f1e6db17ca696d177e138 488 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 353 482 8.4E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_48730 332e7f180f3f1e6db17ca696d177e138 488 SUPERFAMILY SSF47384 230 310 5.89E-18 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_37420 61e3e9c77e45179daf98e6c7f1b8ad4c 128 Pfam PF13581 Histidine kinase-like ATPase domain 18 119 3.0E-10 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_37420 61e3e9c77e45179daf98e6c7f1b8ad4c 128 SUPERFAMILY SSF55874 39 122 2.46E-9 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_37420 61e3e9c77e45179daf98e6c7f1b8ad4c 128 Gene3D G3DSA:3.30.565.10 3 125 2.7E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_31660 fd350ffb1029a1b84f7959c96f28efef 197 SUPERFAMILY SSF53597 1 195 5.63E-18 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AMIS_31660 fd350ffb1029a1b84f7959c96f28efef 197 Pfam PF01872 RibD C-terminal domain 4 170 5.3E-6 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 AMIS_31660 fd350ffb1029a1b84f7959c96f28efef 197 Gene3D G3DSA:3.40.430.10 1 195 8.4E-29 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AMIS_3470 ddece27e5573259d25f4a6d41409f6c2 376 SUPERFAMILY SSF51905 7 344 3.71E-41 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_3470 ddece27e5573259d25f4a6d41409f6c2 376 Pfam PF01494 FAD binding domain 7 283 3.0E-13 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 AMIS_3470 ddece27e5573259d25f4a6d41409f6c2 376 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 262 277 2.6E-14 T 14-10-2018 AMIS_3470 ddece27e5573259d25f4a6d41409f6c2 376 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 2.6E-14 T 14-10-2018 AMIS_3470 ddece27e5573259d25f4a6d41409f6c2 376 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 143 158 2.6E-14 T 14-10-2018 AMIS_3470 ddece27e5573259d25f4a6d41409f6c2 376 TIGRFAM TIGR02032 GG-red-SF: geranylgeranyl reductase family 7 296 7.4E-67 T 14-10-2018 IPR011777 Geranylgeranyl reductase family GO:0016628|GO:0055114 AMIS_3470 ddece27e5573259d25f4a6d41409f6c2 376 Gene3D G3DSA:3.50.50.60 4 333 2.9E-60 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_37490 87d8f7b9eb9c83c0f48b574b22c7dba2 330 Pfam PF02653 Branched-chain amino acid transport system / permease component 49 317 2.3E-40 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 AMIS_58890 5cffba73b2b406d00c4ec65962d2876e 203 SUPERFAMILY SSF46689 21 103 1.89E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_58890 5cffba73b2b406d00c4ec65962d2876e 203 Pfam PF00440 Bacterial regulatory proteins, tetR family 34 79 3.1E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_58890 5cffba73b2b406d00c4ec65962d2876e 203 SUPERFAMILY SSF48498 101 200 1.3E-11 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_58890 5cffba73b2b406d00c4ec65962d2876e 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 54 77 2.0E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_58890 5cffba73b2b406d00c4ec65962d2876e 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 47 2.0E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_58890 5cffba73b2b406d00c4ec65962d2876e 203 Gene3D G3DSA:1.10.357.10 17 203 2.6E-46 T 14-10-2018 AMIS_69840 c7027b443077137e66f8bdde4c460a1a 351 Pfam PF12698 ABC-2 family transporter protein 137 327 5.8E-24 T 14-10-2018 AMIS_61370 748074a48d9ca2d55cfa8e8567d7897e 306 Pfam PF01925 Sulfite exporter TauE/SafE 6 252 4.4E-42 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AMIS_53220 3162758872b91f34e4ea1ea2bdf3995c 141 Gene3D G3DSA:2.60.130.10 1 117 6.6E-17 T 14-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AMIS_53220 3162758872b91f34e4ea1ea2bdf3995c 141 SUPERFAMILY SSF49482 2 102 1.96E-18 T 14-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AMIS_15780 125b8d0001bdd5658bf469847cf2cc76 330 Pfam PF02653 Branched-chain amino acid transport system / permease component 18 310 1.1E-48 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 AMIS_46240 26e3ea26e779deda0fa1ce116da5fa07 317 Gene3D G3DSA:3.50.50.60 10 278 3.0E-64 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_46240 26e3ea26e779deda0fa1ce116da5fa07 317 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 10 274 1.1E-38 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMIS_46240 26e3ea26e779deda0fa1ce116da5fa07 317 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 11 33 1.1E-25 T 14-10-2018 AMIS_46240 26e3ea26e779deda0fa1ce116da5fa07 317 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 140 149 1.1E-25 T 14-10-2018 AMIS_46240 26e3ea26e779deda0fa1ce116da5fa07 317 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 1.1E-25 T 14-10-2018 AMIS_46240 26e3ea26e779deda0fa1ce116da5fa07 317 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 43 58 1.1E-25 T 14-10-2018 AMIS_46240 26e3ea26e779deda0fa1ce116da5fa07 317 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 262 276 1.1E-25 T 14-10-2018 AMIS_46240 26e3ea26e779deda0fa1ce116da5fa07 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 137 155 1.5E-15 T 14-10-2018 AMIS_46240 26e3ea26e779deda0fa1ce116da5fa07 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 277 1.5E-15 T 14-10-2018 AMIS_46240 26e3ea26e779deda0fa1ce116da5fa07 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 1.5E-15 T 14-10-2018 AMIS_46240 26e3ea26e779deda0fa1ce116da5fa07 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 1.5E-15 T 14-10-2018 AMIS_46240 26e3ea26e779deda0fa1ce116da5fa07 317 Gene3D G3DSA:3.50.50.60 149 268 3.0E-64 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_46240 26e3ea26e779deda0fa1ce116da5fa07 317 SUPERFAMILY SSF51905 9 233 1.86E-39 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_66640 773d6e201f607d0e561af7ffa8630077 330 Gene3D G3DSA:1.10.600.10 3 329 4.8E-93 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily AMIS_66640 773d6e201f607d0e561af7ffa8630077 330 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 207 219 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site AMIS_66640 773d6e201f607d0e561af7ffa8630077 330 SUPERFAMILY SSF48576 12 329 8.48E-77 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily AMIS_66640 773d6e201f607d0e561af7ffa8630077 330 Pfam PF00348 Polyprenyl synthetase 37 265 5.3E-57 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 AMIS_29750 5b2d81c9ebbc1027c82df81b117e7639 311 SUPERFAMILY SSF161098 26 311 6.41E-56 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_29750 5b2d81c9ebbc1027c82df81b117e7639 311 Gene3D G3DSA:1.10.3720.10 21 302 7.6E-68 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_29750 5b2d81c9ebbc1027c82df81b117e7639 311 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 304 4.7E-10 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_200 dc16f7c64683f9cf0c9f5de3618d92ca 256 Gene3D G3DSA:3.40.50.1110 4 193 1.2E-27 T 14-10-2018 IPR036514 SGNH hydrolase superfamily AMIS_200 dc16f7c64683f9cf0c9f5de3618d92ca 256 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 8 183 3.2E-28 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain AMIS_200 dc16f7c64683f9cf0c9f5de3618d92ca 256 SUPERFAMILY SSF52266 3 192 9.31E-36 T 14-10-2018 AMIS_21910 0f66e96b05fe33961679133d3b6bf0bf 328 SUPERFAMILY SSF51430 8 319 9.56E-57 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMIS_21910 0f66e96b05fe33961679133d3b6bf0bf 328 Pfam PF00248 Aldo/keto reductase family 20 308 5.9E-39 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain AMIS_21910 0f66e96b05fe33961679133d3b6bf0bf 328 Gene3D G3DSA:3.20.20.100 7 318 3.7E-64 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMIS_14800 c0556a7df91325580cfdf78239cdf5d7 143 SMART SM00507 69 118 8.6E-13 T 14-10-2018 IPR003615 HNH nuclease AMIS_14800 c0556a7df91325580cfdf78239cdf5d7 143 Pfam PF14279 HNH endonuclease 82 132 2.5E-14 T 14-10-2018 IPR029471 HNH endonuclease 5 AMIS_14800 c0556a7df91325580cfdf78239cdf5d7 143 Gene3D G3DSA:3.30.40.60 55 141 9.8E-21 T 14-10-2018 AMIS_52610 c6c93de55f31bfd91c6d3987b5062fde 215 Gene3D G3DSA:3.30.1360.20 4 97 1.5E-17 T 14-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 AMIS_52610 c6c93de55f31bfd91c6d3987b5062fde 215 Gene3D G3DSA:3.10.180.10 98 215 5.7E-19 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_52610 c6c93de55f31bfd91c6d3987b5062fde 215 SUPERFAMILY SSF54593 113 213 1.11E-7 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_52610 c6c93de55f31bfd91c6d3987b5062fde 215 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 6 90 3.8E-17 T 14-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 AMIS_52610 c6c93de55f31bfd91c6d3987b5062fde 215 SUPERFAMILY SSF55248 19 93 5.89E-19 T 14-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 AMIS_40860 c6b75bb6e5547f3c3b555eef9130d307 295 SUPERFAMILY SSF103481 196 287 6.28E-10 T 14-10-2018 AMIS_40860 c6b75bb6e5547f3c3b555eef9130d307 295 Pfam PF00892 EamA-like transporter family 154 282 1.8E-13 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMIS_40860 c6b75bb6e5547f3c3b555eef9130d307 295 SUPERFAMILY SSF103481 56 149 1.02E-7 T 14-10-2018 AMIS_29970 bde513829bcf2b7a8c6d2aa72e1179eb 231 SUPERFAMILY SSF52172 3 130 1.71E-42 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_29970 bde513829bcf2b7a8c6d2aa72e1179eb 231 SMART SM00448 3 114 1.2E-44 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_29970 bde513829bcf2b7a8c6d2aa72e1179eb 231 SUPERFAMILY SSF46894 129 226 1.39E-27 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_29970 bde513829bcf2b7a8c6d2aa72e1179eb 231 Pfam PF00072 Response regulator receiver domain 5 114 5.7E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_29970 bde513829bcf2b7a8c6d2aa72e1179eb 231 Gene3D G3DSA:3.40.50.2300 2 121 1.0E-38 T 14-10-2018 AMIS_29970 bde513829bcf2b7a8c6d2aa72e1179eb 231 Gene3D G3DSA:1.10.10.10 122 230 2.0E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_29970 bde513829bcf2b7a8c6d2aa72e1179eb 231 SMART SM00862 150 225 3.2E-28 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_29970 bde513829bcf2b7a8c6d2aa72e1179eb 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 224 2.3E-26 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_500 6cf0228a590d945b756f3bc9902d05b6 792 Pfam PF04203 Sortase family 644 770 2.2E-31 T 14-10-2018 IPR005754 Sortase family AMIS_500 6cf0228a590d945b756f3bc9902d05b6 792 Gene3D G3DSA:2.40.260.10 597 785 2.6E-51 T 14-10-2018 IPR023365 Sortase domain superfamily AMIS_500 6cf0228a590d945b756f3bc9902d05b6 792 SUPERFAMILY SSF63817 586 771 4.84E-32 T 14-10-2018 IPR023365 Sortase domain superfamily AMIS_500 6cf0228a590d945b756f3bc9902d05b6 792 TIGRFAM TIGR01076 sortase_fam: sortase 642 769 1.6E-17 T 14-10-2018 IPR005754 Sortase family AMIS_65830 6a344577aaaeb6668f072616d57eebfd 336 SUPERFAMILY SSF51556 54 303 1.36E-37 T 14-10-2018 IPR032466 Metal-dependent hydrolase AMIS_65830 6a344577aaaeb6668f072616d57eebfd 336 Pfam PF01979 Amidohydrolase family 50 300 1.8E-6 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AMIS_65830 6a344577aaaeb6668f072616d57eebfd 336 Gene3D G3DSA:3.20.20.140 55 307 3.8E-45 T 14-10-2018 AMIS_30400 d60ae20e2b81b5e911bceb68cbaa30ea 267 SUPERFAMILY SSF56112 35 202 7.31E-17 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMIS_30400 d60ae20e2b81b5e911bceb68cbaa30ea 267 Gene3D G3DSA:3.90.1200.10 83 177 1.5E-7 T 14-10-2018 AMIS_30400 d60ae20e2b81b5e911bceb68cbaa30ea 267 Pfam PF01636 Phosphotransferase enzyme family 116 162 1.7E-6 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase AMIS_18570 c3886dbbd08d2f1fda870af30caf1755 307 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 53 302 3.2E-35 T 14-10-2018 IPR005218 Diacylglycerol/lipid kinase AMIS_18570 c3886dbbd08d2f1fda870af30caf1755 307 Gene3D G3DSA:2.60.200.40 137 291 5.0E-27 T 14-10-2018 AMIS_18570 c3886dbbd08d2f1fda870af30caf1755 307 Gene3D G3DSA:3.40.50.10330 10 136 3.4E-23 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 AMIS_18570 c3886dbbd08d2f1fda870af30caf1755 307 Pfam PF00781 Diacylglycerol kinase catalytic domain 17 133 4.7E-19 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 AMIS_18570 c3886dbbd08d2f1fda870af30caf1755 307 SUPERFAMILY SSF111331 14 303 2.62E-55 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily AMIS_44100 173cae33754ba03ead2ac6f9c078f9bf 156 Pfam PF12680 SnoaL-like domain 18 121 2.5E-13 T 14-10-2018 IPR037401 SnoaL-like domain AMIS_44100 173cae33754ba03ead2ac6f9c078f9bf 156 Gene3D G3DSA:3.10.450.50 1 151 1.1E-23 T 14-10-2018 AMIS_44100 173cae33754ba03ead2ac6f9c078f9bf 156 SUPERFAMILY SSF54427 2 140 3.42E-22 T 14-10-2018 IPR032710 NTF2-like domain superfamily AMIS_56490 9b3907eb8b354e1f2483bb5952daa966 263 Pfam PF02146 Sir2 family 22 201 1.0E-49 T 14-10-2018 IPR003000 Sirtuin family GO:0070403 AMIS_56490 9b3907eb8b354e1f2483bb5952daa966 263 Gene3D G3DSA:3.40.50.1220 13 245 2.5E-82 T 14-10-2018 AMIS_56490 9b3907eb8b354e1f2483bb5952daa966 263 Gene3D G3DSA:3.30.1600.10 31 171 2.5E-82 T 14-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily AMIS_56490 9b3907eb8b354e1f2483bb5952daa966 263 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 15 251 56.807 T 14-10-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 AMIS_56490 9b3907eb8b354e1f2483bb5952daa966 263 SUPERFAMILY SSF52467 3 249 2.24E-79 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AMIS_1560 11c0f3330bdb6b6b156f95870d6ee3c8 941 Pfam PF13439 Glycosyltransferase Family 4 13 197 5.0E-12 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AMIS_1560 11c0f3330bdb6b6b156f95870d6ee3c8 941 Pfam PF17101 Stealth protein CR1, conserved region 1 623 648 7.7E-13 T 14-10-2018 IPR031358 Stealth protein CR1, conserved region 1 AMIS_1560 11c0f3330bdb6b6b156f95870d6ee3c8 941 SUPERFAMILY SSF53756 2 380 1.17E-65 T 14-10-2018 AMIS_1560 11c0f3330bdb6b6b156f95870d6ee3c8 941 Gene3D G3DSA:3.40.50.2000 203 364 5.9E-42 T 14-10-2018 AMIS_1560 11c0f3330bdb6b6b156f95870d6ee3c8 941 Pfam PF11380 Stealth protein CR2, conserved region 2 662 767 5.1E-45 T 14-10-2018 IPR021520 Stealth protein CR2, conserved region 2 GO:0016772 AMIS_1560 11c0f3330bdb6b6b156f95870d6ee3c8 941 Gene3D G3DSA:3.40.50.2000 1 202 1.0E-9 T 14-10-2018 AMIS_1560 11c0f3330bdb6b6b156f95870d6ee3c8 941 Pfam PF00534 Glycosyl transferases group 1 207 358 1.4E-36 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 AMIS_1560 11c0f3330bdb6b6b156f95870d6ee3c8 941 Pfam PF17102 Stealth protein CR3, conserved region 3 813 858 3.2E-12 T 14-10-2018 IPR031357 Stealth protein CR3, conserved region 3 AMIS_1560 11c0f3330bdb6b6b156f95870d6ee3c8 941 Pfam PF17103 Stealth protein CR4, conserved region 4 888 940 6.5E-15 T 14-10-2018 IPR031356 Stealth protein CR4, conserved region 4 AMIS_76730 f2faa8a427ab7764bba8ceaf303e0310 132 Gene3D G3DSA:1.10.10.10 1 76 3.1E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_76730 f2faa8a427ab7764bba8ceaf303e0310 132 Pfam PF01475 Ferric uptake regulator family 4 114 1.7E-24 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 AMIS_76730 f2faa8a427ab7764bba8ceaf303e0310 132 SUPERFAMILY SSF46785 1 126 2.35E-31 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_76730 f2faa8a427ab7764bba8ceaf303e0310 132 Gene3D G3DSA:3.30.1490.190 78 132 1.0E-13 T 14-10-2018 AMIS_48610 535809d98af2794c8636eb6e2251e15c 625 SUPERFAMILY SSF52467 188 376 5.97E-44 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AMIS_48610 535809d98af2794c8636eb6e2251e15c 625 Gene3D G3DSA:3.40.50.1220 213 385 5.2E-41 T 14-10-2018 AMIS_48610 535809d98af2794c8636eb6e2251e15c 625 Gene3D G3DSA:3.40.50.970 393 586 4.6E-43 T 14-10-2018 AMIS_48610 535809d98af2794c8636eb6e2251e15c 625 Gene3D G3DSA:3.40.50.970 1 208 1.9E-32 T 14-10-2018 AMIS_48610 535809d98af2794c8636eb6e2251e15c 625 SUPERFAMILY SSF52518 393 603 8.58E-46 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold AMIS_48610 535809d98af2794c8636eb6e2251e15c 625 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 415 574 9.8E-37 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AMIS_48610 535809d98af2794c8636eb6e2251e15c 625 TIGRFAM TIGR04377 myo_inos_iolD: 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase 4 617 1.2E-270 T 14-10-2018 IPR030817 3,5/4-Trihydroxycyclohexa-1,2-dione hydrolase GO:0016823|GO:0019310|GO:0030976 KEGG: 00562+3.7.1.22 AMIS_48610 535809d98af2794c8636eb6e2251e15c 625 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 222 356 1.7E-34 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AMIS_48610 535809d98af2794c8636eb6e2251e15c 625 SUPERFAMILY SSF52518 3 212 1.28E-31 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold AMIS_48610 535809d98af2794c8636eb6e2251e15c 625 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 6 199 2.9E-34 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AMIS_27710 49eef42d37f300ecd2e3b55f7435dac4 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 3.9E-22 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_27710 49eef42d37f300ecd2e3b55f7435dac4 301 SUPERFAMILY SSF53850 92 298 6.24E-35 T 14-10-2018 AMIS_27710 49eef42d37f300ecd2e3b55f7435dac4 301 Gene3D G3DSA:1.10.10.10 3 94 4.9E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_27710 49eef42d37f300ecd2e3b55f7435dac4 301 Pfam PF03466 LysR substrate binding domain 91 295 8.2E-40 T 14-10-2018 IPR005119 LysR, substrate-binding AMIS_27710 49eef42d37f300ecd2e3b55f7435dac4 301 SUPERFAMILY SSF46785 3 113 4.34E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_27710 49eef42d37f300ecd2e3b55f7435dac4 301 Gene3D G3DSA:3.40.190.10 166 269 3.6E-36 T 14-10-2018 AMIS_27710 49eef42d37f300ecd2e3b55f7435dac4 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.6E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_27710 49eef42d37f300ecd2e3b55f7435dac4 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.6E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_27710 49eef42d37f300ecd2e3b55f7435dac4 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.6E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_27710 49eef42d37f300ecd2e3b55f7435dac4 301 Gene3D G3DSA:3.40.190.10 95 291 3.6E-36 T 14-10-2018 AMIS_52930 2794f34200a7dc5115acd74d36b9de6a 345 Pfam PF01032 FecCD transport family 34 336 3.2E-74 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AMIS_52930 2794f34200a7dc5115acd74d36b9de6a 345 Gene3D G3DSA:1.10.3470.10 20 344 2.4E-82 T 14-10-2018 IPR037294 ABC transporter, BtuC-like AMIS_52930 2794f34200a7dc5115acd74d36b9de6a 345 SUPERFAMILY SSF81345 18 336 2.62E-61 T 14-10-2018 IPR037294 ABC transporter, BtuC-like AMIS_71660 3c385a23cdef6ec118d5db4c695d6ba3 194 Gene3D G3DSA:1.10.10.10 1 98 4.7E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_71660 3c385a23cdef6ec118d5db4c695d6ba3 194 Pfam PF03551 Transcriptional regulator PadR-like family 10 86 2.7E-11 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal AMIS_71660 3c385a23cdef6ec118d5db4c695d6ba3 194 SUPERFAMILY SSF46785 6 175 1.3E-28 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_2210 5da0ef7a4b5750045464634b27d968a6 413 Hamap MF_00992 Cyclic dehypoxanthine futalosine synthase [mqnC]. 17 376 49.291 T 14-10-2018 IPR022431 Cyclic dehypoxanthine futalosine synthase GO:0009234 KEGG: 00130+1.21.98.1|MetaCyc: PWY-7371|MetaCyc: PWY-7374 AMIS_2210 5da0ef7a4b5750045464634b27d968a6 413 Pfam PF04055 Radical SAM superfamily 63 233 2.4E-13 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMIS_2210 5da0ef7a4b5750045464634b27d968a6 413 SUPERFAMILY SSF102114 17 329 6.67E-46 T 14-10-2018 AMIS_2210 5da0ef7a4b5750045464634b27d968a6 413 TIGRFAM TIGR00423 TIGR00423: radical SAM domain protein, CofH subfamily 54 373 3.0E-101 T 14-10-2018 IPR020050 FO synthase, subunit 2 GO:0016765 KEGG: 00680+2.5.1.77 AMIS_2210 5da0ef7a4b5750045464634b27d968a6 413 TIGRFAM TIGR03699 menaquin_MqnC: dehypoxanthine futalosine cyclase 19 373 9.7E-138 T 14-10-2018 IPR022431 Cyclic dehypoxanthine futalosine synthase GO:0009234 KEGG: 00130+1.21.98.1|MetaCyc: PWY-7371|MetaCyc: PWY-7374 AMIS_2210 5da0ef7a4b5750045464634b27d968a6 413 PIRSF PIRSF004762 251 386 1.2E-30 T 14-10-2018 AMIS_2210 5da0ef7a4b5750045464634b27d968a6 413 PIRSF PIRSF004762 2 248 2.7E-65 T 14-10-2018 AMIS_2210 5da0ef7a4b5750045464634b27d968a6 413 Gene3D G3DSA:3.20.20.70 6 371 2.5E-56 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_28670 dae18f29c80e0da5fe2843e087de6e98 208 ProSitePatterns PS01081 TetR-type HTH domain signature. 38 68 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMIS_28670 dae18f29c80e0da5fe2843e087de6e98 208 SUPERFAMILY SSF46689 13 85 5.64E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_28670 dae18f29c80e0da5fe2843e087de6e98 208 SUPERFAMILY SSF48498 90 199 5.87E-9 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_28670 dae18f29c80e0da5fe2843e087de6e98 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 72 8.0E-17 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_28670 dae18f29c80e0da5fe2843e087de6e98 208 Gene3D G3DSA:1.10.357.10 17 201 1.2E-37 T 14-10-2018 AMIS_28670 dae18f29c80e0da5fe2843e087de6e98 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 47 70 7.7E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_28670 dae18f29c80e0da5fe2843e087de6e98 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 26 39 7.7E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_33060 4ddf8971d4f03c4c3304bb3cd89f2cbb 346 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AMIS_33060 4ddf8971d4f03c4c3304bb3cd89f2cbb 346 SUPERFAMILY SSF50129 6 171 1.22E-54 T 14-10-2018 IPR011032 GroES-like superfamily AMIS_33060 4ddf8971d4f03c4c3304bb3cd89f2cbb 346 SMART SM00829 11 341 4.3E-7 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMIS_33060 4ddf8971d4f03c4c3304bb3cd89f2cbb 346 Gene3D G3DSA:3.40.50.720 159 313 1.9E-133 T 14-10-2018 AMIS_33060 4ddf8971d4f03c4c3304bb3cd89f2cbb 346 SUPERFAMILY SSF51735 148 311 2.38E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_33060 4ddf8971d4f03c4c3304bb3cd89f2cbb 346 Gene3D G3DSA:3.90.180.10 13 341 1.9E-133 T 14-10-2018 AMIS_33060 4ddf8971d4f03c4c3304bb3cd89f2cbb 346 Pfam PF00107 Zinc-binding dehydrogenase 185 307 1.2E-16 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMIS_33060 4ddf8971d4f03c4c3304bb3cd89f2cbb 346 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 143 8.9E-29 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMIS_22990 09c4dc3d5936b98c51ec22b519b84190 485 PIRSF PIRSF036492 20 485 6.4E-90 T 14-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 AMIS_22990 09c4dc3d5936b98c51ec22b519b84190 485 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 259 270 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AMIS_22990 09c4dc3d5936b98c51ec22b519b84190 485 Gene3D G3DSA:3.40.605.10 3 446 1.7E-136 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AMIS_22990 09c4dc3d5936b98c51ec22b519b84190 485 Pfam PF00171 Aldehyde dehydrogenase family 4 450 3.2E-125 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AMIS_22990 09c4dc3d5936b98c51ec22b519b84190 485 Gene3D G3DSA:3.40.309.10 235 419 1.7E-136 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AMIS_22990 09c4dc3d5936b98c51ec22b519b84190 485 SUPERFAMILY SSF53720 3 453 4.06E-131 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMIS_62730 05a4c0b2cf56297e1c714e67427ba5fc 287 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 104 271 1.2E-21 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AMIS_62730 05a4c0b2cf56297e1c714e67427ba5fc 287 SUPERFAMILY SSF50891 105 272 2.05E-27 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily AMIS_62730 05a4c0b2cf56297e1c714e67427ba5fc 287 Gene3D G3DSA:2.40.100.10 100 273 2.7E-31 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily AMIS_70540 f1d5a7a97c627881c74f2b3477e7d7f0 556 Gene3D G3DSA:3.60.21.70 102 394 2.5E-13 T 14-10-2018 IPR038607 PhoD-like superfamily AMIS_70540 f1d5a7a97c627881c74f2b3477e7d7f0 556 Pfam PF09423 PhoD-like phosphatase 133 251 9.8E-14 T 14-10-2018 IPR018946 Alkaline phosphatase D-related AMIS_70540 f1d5a7a97c627881c74f2b3477e7d7f0 556 SUPERFAMILY SSF56300 123 367 2.17E-8 T 14-10-2018 AMIS_28100 823d4bf34a98762b184a8ee094b64fc6 270 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 264 5.3E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_28100 823d4bf34a98762b184a8ee094b64fc6 270 Gene3D G3DSA:1.10.3720.10 2 257 3.2E-60 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_28100 823d4bf34a98762b184a8ee094b64fc6 270 SUPERFAMILY SSF161098 10 269 7.98E-67 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_3250 26f1504f2fc0eed05e07cc52b9fbfd53 146 Pfam PF13581 Histidine kinase-like ATPase domain 9 141 7.8E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_3250 26f1504f2fc0eed05e07cc52b9fbfd53 146 Gene3D G3DSA:3.30.565.10 2 146 1.7E-12 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_46780 2232e1d32554eecfb9af0a5d7b93ce52 103 Gene3D G3DSA:3.30.750.24 3 101 6.1E-15 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_46780 2232e1d32554eecfb9af0a5d7b93ce52 103 Pfam PF01740 STAS domain 12 74 5.1E-8 T 14-10-2018 IPR002645 STAS domain AMIS_46780 2232e1d32554eecfb9af0a5d7b93ce52 103 SUPERFAMILY SSF52091 12 93 3.92E-12 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_42740 1066d82d510e8af2eaf5744b58a4c1f3 246 Pfam PF11575 FhuF 2Fe-2S C-terminal domain 213 233 5.5E-9 T 14-10-2018 IPR024726 Ferric iron reductase, C-terminal GO:0051537 AMIS_16390 7d5bd581bc92657135c431b9bf32c7b7 210 SUPERFAMILY SSF53137 74 201 1.03E-17 T 14-10-2018 AMIS_16390 7d5bd581bc92657135c431b9bf32c7b7 210 Gene3D G3DSA:3.30.420.60 75 195 6.9E-12 T 14-10-2018 AMIS_11230 2b1aab429c380db65814ccb001ef03cf 210 PRINTS PR00127 Clp protease catalytic subunit P signature 96 113 1.6E-47 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMIS_11230 2b1aab429c380db65814ccb001ef03cf 210 PRINTS PR00127 Clp protease catalytic subunit P signature 25 40 1.6E-47 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMIS_11230 2b1aab429c380db65814ccb001ef03cf 210 PRINTS PR00127 Clp protease catalytic subunit P signature 117 136 1.6E-47 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMIS_11230 2b1aab429c380db65814ccb001ef03cf 210 PRINTS PR00127 Clp protease catalytic subunit P signature 65 85 1.6E-47 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMIS_11230 2b1aab429c380db65814ccb001ef03cf 210 PRINTS PR00127 Clp protease catalytic subunit P signature 174 193 1.6E-47 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMIS_11230 2b1aab429c380db65814ccb001ef03cf 210 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 8 199 39.566 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMIS_11230 2b1aab429c380db65814ccb001ef03cf 210 SUPERFAMILY SSF52096 25 197 6.63E-67 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMIS_11230 2b1aab429c380db65814ccb001ef03cf 210 Gene3D G3DSA:3.90.226.10 7 200 4.8E-74 T 14-10-2018 AMIS_11230 2b1aab429c380db65814ccb001ef03cf 210 Pfam PF00574 Clp protease 24 197 3.3E-77 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA AMIS_11230 2b1aab429c380db65814ccb001ef03cf 210 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 118 131 - T 14-10-2018 IPR033135 ClpP, histidine active site AMIS_14510 2a2750d05d13abcd4dd190531c9e3d1b 163 Hamap MF_00977 3'-5' exoribonuclease. 3 163 41.802 T 14-10-2018 IPR030853 3-5 exoribonuclease, actinobacteria GO:0000287|GO:0008408 AMIS_14510 2a2750d05d13abcd4dd190531c9e3d1b 163 Pfam PF16473 3' exoribonuclease, RNase T-like 4 159 9.8E-19 T 14-10-2018 IPR033390 3'-5' exoribonuclease Rv2179c-like domain AMIS_14510 2a2750d05d13abcd4dd190531c9e3d1b 163 SUPERFAMILY SSF53098 6 158 6.83E-6 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily AMIS_14510 2a2750d05d13abcd4dd190531c9e3d1b 163 Gene3D G3DSA:3.30.420.10 3 163 2.2E-61 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMIS_72450 ab4c56f6683306680cb21c6a23d2caa7 487 SUPERFAMILY SSF56059 32 482 2.3E-45 T 14-10-2018 AMIS_72450 ab4c56f6683306680cb21c6a23d2caa7 487 Gene3D G3DSA:3.30.1490.330 349 435 2.1E-14 T 14-10-2018 AMIS_72450 ab4c56f6683306680cb21c6a23d2caa7 487 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 144 483 5.1E-84 T 14-10-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain AMIS_72450 ab4c56f6683306680cb21c6a23d2caa7 487 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 19 75 3.3E-8 T 14-10-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain AMIS_72450 ab4c56f6683306680cb21c6a23d2caa7 487 SUPERFAMILY SSF52440 249 364 1.24E-20 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AMIS_16020 62cc525f1334f61b560010859a3bf954 339 Gene3D G3DSA:3.40.50.300 93 263 1.1E-43 T 14-10-2018 AMIS_16020 62cc525f1334f61b560010859a3bf954 339 Pfam PF03193 RsgA GTPase 89 263 1.8E-38 T 14-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 AMIS_16020 62cc525f1334f61b560010859a3bf954 339 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 27 327 28.955 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 AMIS_16020 62cc525f1334f61b560010859a3bf954 339 SUPERFAMILY SSF52540 108 323 4.65E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_16020 62cc525f1334f61b560010859a3bf954 339 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 70 319 1.5E-40 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 AMIS_16020 62cc525f1334f61b560010859a3bf954 339 Gene3D G3DSA:1.10.40.50 266 335 3.2E-20 T 14-10-2018 AMIS_42240 c49839a6c5c4d2fcb5697afefea39dac 101 Gene3D G3DSA:3.40.1620.10 1 41 1.6E-10 T 14-10-2018 AMIS_42240 c49839a6c5c4d2fcb5697afefea39dac 101 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 3 57 1.4E-14 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AMIS_42240 c49839a6c5c4d2fcb5697afefea39dac 101 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 4 51 4.5E-16 T 14-10-2018 AMIS_42240 c49839a6c5c4d2fcb5697afefea39dac 101 SUPERFAMILY SSF143120 3 51 2.62E-11 T 14-10-2018 IPR036165 YefM-like superfamily AMIS_58270 c43d67030e49dc1a3ba33e4dc1a51bfd 645 Gene3D G3DSA:3.40.50.720 287 571 1.1E-99 T 14-10-2018 AMIS_58270 c43d67030e49dc1a3ba33e4dc1a51bfd 645 Pfam PF02719 Polysaccharide biosynthesis protein 292 568 9.1E-99 T 14-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain AMIS_58270 c43d67030e49dc1a3ba33e4dc1a51bfd 645 SUPERFAMILY SSF51735 149 279 1.57E-12 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_58270 c43d67030e49dc1a3ba33e4dc1a51bfd 645 SUPERFAMILY SSF51735 289 547 2.39E-58 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_58270 c43d67030e49dc1a3ba33e4dc1a51bfd 645 Gene3D G3DSA:3.40.50.720 149 273 8.0E-30 T 14-10-2018 AMIS_58270 c43d67030e49dc1a3ba33e4dc1a51bfd 645 Pfam PF13727 CoA-binding domain 71 247 9.5E-15 T 14-10-2018 AMIS_13910 3c62a6f67083ebef6ce5b0014463362d 510 SUPERFAMILY SSF53187 188 508 1.17E-103 T 14-10-2018 AMIS_13910 3c62a6f67083ebef6ce5b0014463362d 510 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 6 510 30.945 T 14-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 AMIS_13910 3c62a6f67083ebef6ce5b0014463362d 510 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 356 363 - T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AMIS_13910 3c62a6f67083ebef6ce5b0014463362d 510 Gene3D G3DSA:3.40.630.10 174 510 1.6E-120 T 14-10-2018 AMIS_13910 3c62a6f67083ebef6ce5b0014463362d 510 SUPERFAMILY SSF52949 18 161 3.71E-24 T 14-10-2018 AMIS_13910 3c62a6f67083ebef6ce5b0014463362d 510 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 194 503 2.2E-108 T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AMIS_13910 3c62a6f67083ebef6ce5b0014463362d 510 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 22 155 1.0E-21 T 14-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AMIS_13910 3c62a6f67083ebef6ce5b0014463362d 510 PRINTS PR00481 Cytosol aminopeptidase signature 330 351 3.5E-46 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMIS_13910 3c62a6f67083ebef6ce5b0014463362d 510 PRINTS PR00481 Cytosol aminopeptidase signature 352 372 3.5E-46 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMIS_13910 3c62a6f67083ebef6ce5b0014463362d 510 PRINTS PR00481 Cytosol aminopeptidase signature 271 288 3.5E-46 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMIS_13910 3c62a6f67083ebef6ce5b0014463362d 510 PRINTS PR00481 Cytosol aminopeptidase signature 380 395 3.5E-46 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMIS_13910 3c62a6f67083ebef6ce5b0014463362d 510 PRINTS PR00481 Cytosol aminopeptidase signature 293 314 3.5E-46 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMIS_13910 3c62a6f67083ebef6ce5b0014463362d 510 Gene3D G3DSA:3.40.220.10 5 161 1.1E-30 T 14-10-2018 AMIS_70680 e26c49c3c65a80e1f29c8df626c59dde 57 SUPERFAMILY SSF57829 2 56 1.22E-19 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 AMIS_70680 e26c49c3c65a80e1f29c8df626c59dde 57 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 56 3.3E-25 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_70680 e26c49c3c65a80e1f29c8df626c59dde 57 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 2 55 19.329 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_70680 e26c49c3c65a80e1f29c8df626c59dde 57 Pfam PF01783 Ribosomal L32p protein family 2 56 1.2E-24 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_80840 3f37d7e0f278cc889d9915af139806df 101 Gene3D G3DSA:3.30.1310.10 5 96 1.3E-8 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily AMIS_80840 3f37d7e0f278cc889d9915af139806df 101 Pfam PF02575 YbaB/EbfC DNA-binding family 17 85 8.3E-12 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AMIS_80840 3f37d7e0f278cc889d9915af139806df 101 SUPERFAMILY SSF82607 16 85 1.96E-9 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily AMIS_56990 b8187d6150b6614be2d29db0155f813f 853 SMART SM00631 114 388 1.3E-4 T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 AMIS_56990 b8187d6150b6614be2d29db0155f813f 853 Gene3D G3DSA:3.40.630.10 119 334 4.9E-34 T 14-10-2018 AMIS_56990 b8187d6150b6614be2d29db0155f813f 853 SUPERFAMILY SSF52317 658 853 3.89E-6 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_56990 b8187d6150b6614be2d29db0155f813f 853 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 188 202 8.7E-5 T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 AMIS_56990 b8187d6150b6614be2d29db0155f813f 853 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 252 260 8.7E-5 T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 AMIS_56990 b8187d6150b6614be2d29db0155f813f 853 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 136 148 8.7E-5 T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 AMIS_56990 b8187d6150b6614be2d29db0155f813f 853 SUPERFAMILY SSF53187 113 373 2.78E-38 T 14-10-2018 AMIS_56990 b8187d6150b6614be2d29db0155f813f 853 Pfam PF00246 Zinc carboxypeptidase 121 301 1.2E-23 T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 AMIS_35270 77696a36bbc259d6b842bcd1e1868321 140 Pfam PF13474 SnoaL-like domain 4 126 2.8E-15 T 14-10-2018 IPR037401 SnoaL-like domain AMIS_35270 77696a36bbc259d6b842bcd1e1868321 140 Gene3D G3DSA:3.10.450.50 1 140 3.9E-30 T 14-10-2018 AMIS_35270 77696a36bbc259d6b842bcd1e1868321 140 SUPERFAMILY SSF54427 2 123 2.8E-20 T 14-10-2018 IPR032710 NTF2-like domain superfamily AMIS_59950 263cff7d810f68ebabf1355ec000148a 316 PRINTS PR00739 Glycosyl hydrolase family 26 signature 165 182 4.3E-11 T 14-10-2018 IPR000805 Glycoside hydrolase family 26 GO:0006080|GO:0016985 KEGG: 00051+3.2.1.78|MetaCyc: PWY-7456 AMIS_59950 263cff7d810f68ebabf1355ec000148a 316 PRINTS PR00739 Glycosyl hydrolase family 26 signature 226 238 4.3E-11 T 14-10-2018 IPR000805 Glycoside hydrolase family 26 GO:0006080|GO:0016985 KEGG: 00051+3.2.1.78|MetaCyc: PWY-7456 AMIS_59950 263cff7d810f68ebabf1355ec000148a 316 PRINTS PR00739 Glycosyl hydrolase family 26 signature 93 107 4.3E-11 T 14-10-2018 IPR000805 Glycoside hydrolase family 26 GO:0006080|GO:0016985 KEGG: 00051+3.2.1.78|MetaCyc: PWY-7456 AMIS_59950 263cff7d810f68ebabf1355ec000148a 316 SUPERFAMILY SSF51445 17 287 1.69E-38 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_59950 263cff7d810f68ebabf1355ec000148a 316 Gene3D G3DSA:3.20.20.80 9 316 4.8E-79 T 14-10-2018 AMIS_59950 263cff7d810f68ebabf1355ec000148a 316 Pfam PF02156 Glycosyl hydrolase family 26 25 313 9.4E-49 T 14-10-2018 IPR022790 Glycosyl hydrolase family 26 domain GO:0004553 AMIS_9840 3fc7b8273fe347ba34ebb265ef495c59 508 Gene3D G3DSA:3.40.720.10 50 472 3.0E-98 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AMIS_9840 3fc7b8273fe347ba34ebb265ef495c59 508 SUPERFAMILY SSF53649 50 494 1.6E-99 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AMIS_9840 3fc7b8273fe347ba34ebb265ef495c59 508 PIRSF PIRSF036666 41 506 5.3E-92 T 14-10-2018 IPR012251 N-acetylglucosamine-6-sulfatase GO:0008449|GO:0030203 KEGG: 00531+3.1.6.14|Reactome: R-HSA-2022857|Reactome: R-HSA-2206305|Reactome: R-HSA-432720|Reactome: R-HSA-6798695 AMIS_9840 3fc7b8273fe347ba34ebb265ef495c59 508 Pfam PF00884 Sulfatase 51 385 8.5E-57 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 AMIS_70270 b97b3d9b74a6db5c275512200743c74b 170 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 80 2.3E-31 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_70270 b97b3d9b74a6db5c275512200743c74b 170 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 77 22.955 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_70270 b97b3d9b74a6db5c275512200743c74b 170 Pfam PF00886 Ribosomal protein S16 9 67 2.4E-23 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_70270 b97b3d9b74a6db5c275512200743c74b 170 Gene3D G3DSA:3.30.1320.10 1 146 4.4E-30 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_70270 b97b3d9b74a6db5c275512200743c74b 170 SUPERFAMILY SSF54565 2 87 8.5E-32 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_24380 4c79114cb7de648ce60bca2dabc6c550 416 SUPERFAMILY SSF53850 70 365 1.29E-60 T 14-10-2018 AMIS_24380 4c79114cb7de648ce60bca2dabc6c550 416 Gene3D G3DSA:3.40.190.10 183 308 2.3E-80 T 14-10-2018 AMIS_24380 4c79114cb7de648ce60bca2dabc6c550 416 Pfam PF13416 Bacterial extracellular solute-binding protein 88 355 1.8E-34 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein AMIS_24380 4c79114cb7de648ce60bca2dabc6c550 416 Gene3D G3DSA:3.40.190.10 74 363 2.3E-80 T 14-10-2018 AMIS_24380 4c79114cb7de648ce60bca2dabc6c550 416 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 301 320 7.2E-19 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMIS_24380 4c79114cb7de648ce60bca2dabc6c550 416 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 142 155 7.2E-19 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMIS_24380 4c79114cb7de648ce60bca2dabc6c550 416 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 199 213 7.2E-19 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMIS_24380 4c79114cb7de648ce60bca2dabc6c550 416 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 217 236 7.2E-19 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMIS_24380 4c79114cb7de648ce60bca2dabc6c550 416 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 174 190 7.2E-19 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMIS_39760 d514d3de28584a55ad600bdc230c4a84 445 TIGRFAM TIGR01910 DapE-ArgE: peptidase, ArgE/DapE family 46 430 3.1E-71 T 14-10-2018 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase AMIS_39760 d514d3de28584a55ad600bdc230c4a84 445 SUPERFAMILY SSF53187 37 439 2.54E-52 T 14-10-2018 AMIS_39760 d514d3de28584a55ad600bdc230c4a84 445 Pfam PF01546 Peptidase family M20/M25/M40 121 436 6.5E-32 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 AMIS_39760 d514d3de28584a55ad600bdc230c4a84 445 Gene3D G3DSA:3.30.70.360 228 353 2.7E-118 T 14-10-2018 AMIS_39760 d514d3de28584a55ad600bdc230c4a84 445 Gene3D G3DSA:3.40.630.10 49 441 2.7E-118 T 14-10-2018 AMIS_39760 d514d3de28584a55ad600bdc230c4a84 445 Pfam PF07687 Peptidase dimerisation domain 225 336 1.5E-8 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain AMIS_39760 d514d3de28584a55ad600bdc230c4a84 445 SUPERFAMILY SSF55031 228 334 4.6E-8 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AMIS_64450 ec40a4f2ea2d6eb153b4722db258c6ec 438 PRINTS PR00131 Glycosyl hydrolase family 1 signature 408 420 1.7E-18 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMIS_64450 ec40a4f2ea2d6eb153b4722db258c6ec 438 PRINTS PR00131 Glycosyl hydrolase family 1 signature 274 288 1.7E-18 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMIS_64450 ec40a4f2ea2d6eb153b4722db258c6ec 438 PRINTS PR00131 Glycosyl hydrolase family 1 signature 363 374 1.7E-18 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMIS_64450 ec40a4f2ea2d6eb153b4722db258c6ec 438 PRINTS PR00131 Glycosyl hydrolase family 1 signature 342 350 1.7E-18 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMIS_64450 ec40a4f2ea2d6eb153b4722db258c6ec 438 PRINTS PR00131 Glycosyl hydrolase family 1 signature 384 401 1.7E-18 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMIS_64450 ec40a4f2ea2d6eb153b4722db258c6ec 438 SUPERFAMILY SSF51445 3 437 4.76E-143 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_64450 ec40a4f2ea2d6eb153b4722db258c6ec 438 Pfam PF00232 Glycosyl hydrolase family 1 2 434 3.1E-141 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMIS_64450 ec40a4f2ea2d6eb153b4722db258c6ec 438 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 3 17 - T 14-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site AMIS_64450 ec40a4f2ea2d6eb153b4722db258c6ec 438 TIGRFAM TIGR03356 BGL: beta-galactosidase 2 430 1.2E-167 T 14-10-2018 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase GO:0008422|GO:0030245 KEGG: 00460+3.2.1.21|KEGG: 00500+3.2.1.21|KEGG: 00940+3.2.1.21|MetaCyc: PWY-3121|MetaCyc: PWY-5176|MetaCyc: PWY-6002|MetaCyc: PWY-6788|MetaCyc: PWY-7091|MetaCyc: PWY-7092|MetaCyc: PWY-7913 AMIS_64450 ec40a4f2ea2d6eb153b4722db258c6ec 438 Gene3D G3DSA:3.20.20.80 1 438 3.2E-151 T 14-10-2018 AMIS_50150 a697a6df71eb33af70668654e0e77be3 313 SUPERFAMILY SSF53756 200 307 1.88E-15 T 14-10-2018 AMIS_50150 a697a6df71eb33af70668654e0e77be3 313 Pfam PF00534 Glycosyl transferases group 1 207 286 7.8E-8 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 AMIS_50150 a697a6df71eb33af70668654e0e77be3 313 Gene3D G3DSA:3.40.50.2000 177 292 2.0E-13 T 14-10-2018 AMIS_36120 4d79f1adc499c08bda6795c6e186240e 363 Gene3D G3DSA:2.40.50.100 58 186 6.8E-52 T 14-10-2018 AMIS_36120 4d79f1adc499c08bda6795c6e186240e 363 Gene3D G3DSA:2.20.25.620 266 324 6.8E-52 T 14-10-2018 AMIS_36120 4d79f1adc499c08bda6795c6e186240e 363 Gene3D G3DSA:1.10.287.470 92 148 6.8E-52 T 14-10-2018 AMIS_36120 4d79f1adc499c08bda6795c6e186240e 363 SUPERFAMILY SSF111369 47 263 1.57E-14 T 14-10-2018 AMIS_36120 4d79f1adc499c08bda6795c6e186240e 363 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 36 325 8.1E-39 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AMIS_36120 4d79f1adc499c08bda6795c6e186240e 363 Gene3D G3DSA:2.40.30.170 52 265 6.8E-52 T 14-10-2018 AMIS_36120 4d79f1adc499c08bda6795c6e186240e 363 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 44 233 2.2E-14 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMIS_60630 7d1bc895c5b937a4400433fc5ca51e56 268 Gene3D G3DSA:3.40.50.10320 7 233 2.6E-41 T 14-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 AMIS_60630 7d1bc895c5b937a4400433fc5ca51e56 268 SUPERFAMILY SSF102588 11 236 5.23E-40 T 14-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 AMIS_60630 7d1bc895c5b937a4400433fc5ca51e56 268 Pfam PF02585 GlcNAc-PI de-N-acetylase 15 131 4.7E-26 T 14-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 AMIS_41780 fce2cd65b32346297a54ff37cd70d15e 393 Pfam PF07690 Major Facilitator Superfamily 11 242 2.5E-13 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_41780 fce2cd65b32346297a54ff37cd70d15e 393 Gene3D G3DSA:1.20.1250.20 203 383 4.0E-18 T 14-10-2018 AMIS_41780 fce2cd65b32346297a54ff37cd70d15e 393 SUPERFAMILY SSF103473 8 389 1.57E-35 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_41780 fce2cd65b32346297a54ff37cd70d15e 393 Gene3D G3DSA:1.20.1250.20 4 187 1.4E-10 T 14-10-2018 AMIS_58250 982b3e1107f80eb12e8025fb35b8ba86 222 Pfam PF02397 Bacterial sugar transferase 12 187 8.1E-60 T 14-10-2018 IPR003362 Bacterial sugar transferase AMIS_63720 bfe98f98f10a4c67cfa47ff56f46c157 328 Pfam PF03561 Allantoicase repeat 185 315 1.3E-37 T 14-10-2018 IPR015908 Allantoicase domain GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 AMIS_63720 bfe98f98f10a4c67cfa47ff56f46c157 328 Pfam PF03561 Allantoicase repeat 17 164 2.1E-45 T 14-10-2018 IPR015908 Allantoicase domain GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 AMIS_63720 bfe98f98f10a4c67cfa47ff56f46c157 328 TIGRFAM TIGR02961 allantoicase: allantoicase 9 316 6.3E-119 T 14-10-2018 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 AMIS_63720 bfe98f98f10a4c67cfa47ff56f46c157 328 SUPERFAMILY SSF49785 175 317 8.08E-42 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_63720 bfe98f98f10a4c67cfa47ff56f46c157 328 Gene3D G3DSA:2.60.120.260 3 169 4.6E-57 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_63720 bfe98f98f10a4c67cfa47ff56f46c157 328 PIRSF PIRSF016516 2 319 4.8E-102 T 14-10-2018 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 AMIS_63720 bfe98f98f10a4c67cfa47ff56f46c157 328 Hamap MF_00813 Probable allantoicase [alc]. 2 318 44.262 T 14-10-2018 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 AMIS_63720 bfe98f98f10a4c67cfa47ff56f46c157 328 SUPERFAMILY SSF49785 5 168 9.78E-55 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_63720 bfe98f98f10a4c67cfa47ff56f46c157 328 Gene3D G3DSA:2.60.120.260 175 316 2.6E-43 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_15810 ca74e860e58097dd964bec69c8b72bfa 422 Gene3D G3DSA:3.40.50.2300 168 297 9.8E-58 T 14-10-2018 AMIS_15810 ca74e860e58097dd964bec69c8b72bfa 422 Gene3D G3DSA:3.40.50.2300 49 357 9.8E-58 T 14-10-2018 AMIS_15810 ca74e860e58097dd964bec69c8b72bfa 422 Pfam PF13458 Periplasmic binding protein 48 403 5.8E-39 T 14-10-2018 IPR028081 Leucine-binding protein domain AMIS_15810 ca74e860e58097dd964bec69c8b72bfa 422 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 70 86 4.8E-5 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMIS_15810 ca74e860e58097dd964bec69c8b72bfa 422 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 374 389 4.8E-5 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMIS_15810 ca74e860e58097dd964bec69c8b72bfa 422 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 48 64 4.8E-5 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMIS_15810 ca74e860e58097dd964bec69c8b72bfa 422 SUPERFAMILY SSF53822 47 413 1.26E-62 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_37010 d06fbe0f1aa3abec16f50e57b0d8dbce 152 SUPERFAMILY SSF52172 27 148 1.04E-26 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_37010 d06fbe0f1aa3abec16f50e57b0d8dbce 152 Pfam PF00072 Response regulator receiver domain 34 144 1.1E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_37010 d06fbe0f1aa3abec16f50e57b0d8dbce 152 SMART SM00448 32 144 4.9E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_37010 d06fbe0f1aa3abec16f50e57b0d8dbce 152 Gene3D G3DSA:3.40.50.12740 32 151 1.1E-27 T 14-10-2018 AMIS_47540 f2992987cc00599a452ec1e02e9375ae 259 Gene3D G3DSA:3.90.550.10 7 248 1.8E-43 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_47540 f2992987cc00599a452ec1e02e9375ae 259 Pfam PF00535 Glycosyl transferase family 2 12 176 1.0E-29 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AMIS_47540 f2992987cc00599a452ec1e02e9375ae 259 SUPERFAMILY SSF53448 9 223 1.19E-39 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_48390 70d31026f97ba141cf28f42410e9019b 301 SUPERFAMILY SSF52402 15 151 3.6E-19 T 14-10-2018 AMIS_48390 70d31026f97ba141cf28f42410e9019b 301 Pfam PF00582 Universal stress protein family 16 149 4.9E-15 T 14-10-2018 IPR006016 UspA AMIS_48390 70d31026f97ba141cf28f42410e9019b 301 Pfam PF00582 Universal stress protein family 164 298 1.4E-18 T 14-10-2018 IPR006016 UspA AMIS_48390 70d31026f97ba141cf28f42410e9019b 301 SUPERFAMILY SSF52402 164 299 1.17E-23 T 14-10-2018 AMIS_48390 70d31026f97ba141cf28f42410e9019b 301 PRINTS PR01438 Universal stress protein signature 13 31 1.6E-8 T 14-10-2018 IPR006015 Universal stress protein A AMIS_48390 70d31026f97ba141cf28f42410e9019b 301 PRINTS PR01438 Universal stress protein signature 276 298 1.6E-8 T 14-10-2018 IPR006015 Universal stress protein A AMIS_48390 70d31026f97ba141cf28f42410e9019b 301 PRINTS PR01438 Universal stress protein signature 258 270 1.6E-8 T 14-10-2018 IPR006015 Universal stress protein A AMIS_48390 70d31026f97ba141cf28f42410e9019b 301 Gene3D G3DSA:3.40.50.620 155 297 1.7E-24 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMIS_48390 70d31026f97ba141cf28f42410e9019b 301 Gene3D G3DSA:3.40.50.620 7 149 1.6E-17 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMIS_67520 a1999baf53b0fc73af6fa6482a1597f2 504 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 87 415 4.2E-59 T 14-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 AMIS_67520 a1999baf53b0fc73af6fa6482a1597f2 504 Gene3D G3DSA:3.90.1150.170 61 464 1.0E-122 T 14-10-2018 AMIS_67520 a1999baf53b0fc73af6fa6482a1597f2 504 Gene3D G3DSA:3.40.640.10 115 358 1.0E-122 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_67520 a1999baf53b0fc73af6fa6482a1597f2 504 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 353 368 7.7E-7 T 14-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 AMIS_67520 a1999baf53b0fc73af6fa6482a1597f2 504 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 88 107 7.7E-7 T 14-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 AMIS_67520 a1999baf53b0fc73af6fa6482a1597f2 504 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 396 415 7.7E-7 T 14-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 AMIS_67520 a1999baf53b0fc73af6fa6482a1597f2 504 SUPERFAMILY SSF53383 43 476 6.87E-111 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_75790 23ffc3b42a1afbb9a25caefec745e3e1 327 SMART SM01004 3 325 6.3E-212 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AMIS_75790 23ffc3b42a1afbb9a25caefec745e3e1 327 SUPERFAMILY SSF51569 2 326 2.64E-128 T 14-10-2018 AMIS_75790 23ffc3b42a1afbb9a25caefec745e3e1 327 PIRSF PIRSF001415 1 327 1.6E-142 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AMIS_75790 23ffc3b42a1afbb9a25caefec745e3e1 327 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 244 256 - T 14-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AMIS_75790 23ffc3b42a1afbb9a25caefec745e3e1 327 Pfam PF00490 Delta-aminolevulinic acid dehydratase 7 322 1.1E-136 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AMIS_75790 23ffc3b42a1afbb9a25caefec745e3e1 327 Gene3D G3DSA:3.20.20.70 1 327 4.2E-134 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_75790 23ffc3b42a1afbb9a25caefec745e3e1 327 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 244 260 3.1E-57 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AMIS_75790 23ffc3b42a1afbb9a25caefec745e3e1 327 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 124 138 3.1E-57 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AMIS_75790 23ffc3b42a1afbb9a25caefec745e3e1 327 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 269 284 3.1E-57 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AMIS_75790 23ffc3b42a1afbb9a25caefec745e3e1 327 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 155 174 3.1E-57 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AMIS_75790 23ffc3b42a1afbb9a25caefec745e3e1 327 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 193 212 3.1E-57 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AMIS_75790 23ffc3b42a1afbb9a25caefec745e3e1 327 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 299 318 3.1E-57 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AMIS_45330 0a7893292101f477305dee6980363bb6 73 Pfam PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain 13 63 1.2E-12 T 14-10-2018 IPR007934 Alpha-L-arabinofuranosidase B, arabinose-binding domain GO:0046373|GO:0046556 AMIS_45330 0a7893292101f477305dee6980363bb6 73 SUPERFAMILY SSF110221 17 70 2.88E-11 T 14-10-2018 IPR036195 Alpha-L-arabinofuranosidase B, arabinose-binding domain superfamily GO:0046373|GO:0046556 AMIS_45330 0a7893292101f477305dee6980363bb6 73 Gene3D G3DSA:2.80.10.50 2 73 1.7E-12 T 14-10-2018 AMIS_4260 944237bf3a724d18ae847a1abbeab153 396 Pfam PF05893 Acyl-CoA reductase (LuxC) 77 256 4.9E-29 T 14-10-2018 IPR008670 Long-chain-fatty-acyl-CoA reductase, LuxC GO:0003995|GO:0008218|GO:0055114 KEGG: 00073+1.2.1.50|MetaCyc: PWY-7723 AMIS_4260 944237bf3a724d18ae847a1abbeab153 396 SUPERFAMILY SSF53720 75 252 3.51E-8 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMIS_32770 cfb93c5991c8a00e2d599e17b70fd52b 277 Gene3D G3DSA:3.40.50.150 3 248 3.3E-44 T 14-10-2018 AMIS_32770 cfb93c5991c8a00e2d599e17b70fd52b 277 SUPERFAMILY SSF53335 18 252 1.22E-42 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_32770 cfb93c5991c8a00e2d599e17b70fd52b 277 Pfam PF13649 Methyltransferase domain 51 146 4.0E-21 T 14-10-2018 AMIS_80140 275054b1aea848377c9e8718a1b70fd2 375 Gene3D G3DSA:1.20.58.340 298 375 1.3E-21 T 14-10-2018 AMIS_80140 275054b1aea848377c9e8718a1b70fd2 375 Gene3D G3DSA:1.20.58.340 185 297 5.5E-33 T 14-10-2018 AMIS_80140 275054b1aea848377c9e8718a1b70fd2 375 SUPERFAMILY SSF143865 47 307 1.31E-64 T 14-10-2018 AMIS_80140 275054b1aea848377c9e8718a1b70fd2 375 Gene3D G3DSA:3.30.460.20 36 184 1.7E-27 T 14-10-2018 AMIS_80140 275054b1aea848377c9e8718a1b70fd2 375 SUPERFAMILY SSF144083 310 372 9.29E-17 T 14-10-2018 AMIS_80140 275054b1aea848377c9e8718a1b70fd2 375 Pfam PF01544 CorA-like Mg2+ transporter protein 77 371 9.7E-60 T 14-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 AMIS_59300 362bff4fce88d89a0b099dcea5a42cee 309 Gene3D G3DSA:3.20.20.30 1 307 1.8E-73 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_59300 362bff4fce88d89a0b099dcea5a42cee 309 SUPERFAMILY SSF51679 5 306 2.09E-59 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_59300 362bff4fce88d89a0b099dcea5a42cee 309 Pfam PF00296 Luciferase-like monooxygenase 15 241 1.4E-50 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMIS_59300 362bff4fce88d89a0b099dcea5a42cee 309 TIGRFAM TIGR03619 F420_Rv2161c: probable F420-dependent oxidoreductase, Rv2161c family 22 283 1.6E-69 T 14-10-2018 IPR019921 Luciferase-like, F420-dependent oxidoreductase, Rv2161c, predicted AMIS_60170 840e6cda82e662a56fd3d3679a660bf4 145 SMART SM00260 1 138 2.6E-31 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMIS_60170 840e6cda82e662a56fd3d3679a660bf4 145 Pfam PF01584 CheW-like domain 5 139 1.2E-28 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMIS_60170 840e6cda82e662a56fd3d3679a660bf4 145 SUPERFAMILY SSF50341 2 139 8.37E-33 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 AMIS_60170 840e6cda82e662a56fd3d3679a660bf4 145 Gene3D G3DSA:2.40.50.180 24 133 4.0E-33 T 14-10-2018 AMIS_60170 840e6cda82e662a56fd3d3679a660bf4 145 Gene3D G3DSA:2.30.30.40 7 132 4.0E-33 T 14-10-2018 AMIS_50660 bf5dfcd3e7286456d94b9b256a1af36f 324 SUPERFAMILY SSF55961 173 321 3.87E-27 T 14-10-2018 AMIS_50660 bf5dfcd3e7286456d94b9b256a1af36f 324 SUPERFAMILY SSF55961 18 163 3.06E-26 T 14-10-2018 AMIS_50660 bf5dfcd3e7286456d94b9b256a1af36f 324 Gene3D G3DSA:3.30.530.20 170 324 2.0E-59 T 14-10-2018 IPR023393 START-like domain superfamily AMIS_50660 bf5dfcd3e7286456d94b9b256a1af36f 324 Gene3D G3DSA:3.30.530.20 15 164 1.1E-38 T 14-10-2018 IPR023393 START-like domain superfamily AMIS_50660 bf5dfcd3e7286456d94b9b256a1af36f 324 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 24 163 3.7E-8 T 14-10-2018 IPR019587 Polyketide cyclase/dehydrase AMIS_50660 bf5dfcd3e7286456d94b9b256a1af36f 324 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 173 296 3.2E-9 T 14-10-2018 IPR019587 Polyketide cyclase/dehydrase AMIS_27980 995adf8ad3dcad02cc43597f5193e28c 316 PIRSF PIRSF020623 14 307 1.7E-56 T 14-10-2018 IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX GO:0006351 AMIS_27980 995adf8ad3dcad02cc43597f5193e28c 316 Pfam PF07848 PaaX-like protein 29 92 2.8E-12 T 14-10-2018 IPR012906 PaaX-like, N-terminal AMIS_27980 995adf8ad3dcad02cc43597f5193e28c 316 Pfam PF08223 PaaX-like protein C-terminal domain 198 287 9.2E-18 T 14-10-2018 IPR013225 PaaX-like, C-terminal AMIS_27980 995adf8ad3dcad02cc43597f5193e28c 316 Gene3D G3DSA:1.10.10.10 26 106 8.3E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_21700 d98949cdc380aa05111a051b1dd1d596 245 Gene3D G3DSA:3.90.226.10 5 245 3.3E-58 T 14-10-2018 AMIS_21700 d98949cdc380aa05111a051b1dd1d596 245 SUPERFAMILY SSF52096 7 245 5.83E-58 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMIS_21700 d98949cdc380aa05111a051b1dd1d596 245 Pfam PF00378 Enoyl-CoA hydratase/isomerase 8 208 4.6E-43 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AMIS_54160 b5a0a6a745e6192549c6518e41c085a5 365 SUPERFAMILY SSF51735 163 290 2.93E-19 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_54160 b5a0a6a745e6192549c6518e41c085a5 365 Gene3D G3DSA:3.90.180.10 105 345 1.4E-25 T 14-10-2018 AMIS_54160 b5a0a6a745e6192549c6518e41c085a5 365 SUPERFAMILY SSF50129 13 116 8.99E-5 T 14-10-2018 IPR011032 GroES-like superfamily AMIS_54160 b5a0a6a745e6192549c6518e41c085a5 365 Pfam PF00107 Zinc-binding dehydrogenase 179 275 1.9E-12 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMIS_54160 b5a0a6a745e6192549c6518e41c085a5 365 Gene3D G3DSA:3.40.50.720 143 308 1.4E-25 T 14-10-2018 AMIS_45100 a435351da6ad89cce068d6faa2921a89 110 Pfam PF03551 Transcriptional regulator PadR-like family 11 83 2.8E-22 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal AMIS_45100 a435351da6ad89cce068d6faa2921a89 110 Gene3D G3DSA:1.10.10.10 2 105 1.2E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_45100 a435351da6ad89cce068d6faa2921a89 110 SUPERFAMILY SSF46785 7 101 6.31E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_5450 8130b51c5ddcabe23773da13e8212ea9 393 SUPERFAMILY SSF69572 7 360 4.19E-107 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 AMIS_5450 8130b51c5ddcabe23773da13e8212ea9 393 Pfam PF00581 Rhodanese-like domain 291 384 8.4E-15 T 14-10-2018 IPR001763 Rhodanese-like domain AMIS_5450 8130b51c5ddcabe23773da13e8212ea9 393 SMART SM00450 291 388 3.7E-27 T 14-10-2018 IPR001763 Rhodanese-like domain AMIS_5450 8130b51c5ddcabe23773da13e8212ea9 393 Pfam PF00899 ThiF family 21 254 1.7E-64 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AMIS_5450 8130b51c5ddcabe23773da13e8212ea9 393 Gene3D G3DSA:3.40.50.720 14 263 2.6E-93 T 14-10-2018 AMIS_5450 8130b51c5ddcabe23773da13e8212ea9 393 Gene3D G3DSA:3.40.250.10 274 390 5.3E-26 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily AMIS_48550 1d01e30ad0622c45aed999b51d8aa380 336 SUPERFAMILY SSF51735 4 152 2.18E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_48550 1d01e30ad0622c45aed999b51d8aa380 336 Gene3D G3DSA:3.30.360.10 142 263 2.0E-100 T 14-10-2018 AMIS_48550 1d01e30ad0622c45aed999b51d8aa380 336 Hamap MF_01671 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase [iolG]. 2 334 46.24 T 14-10-2018 IPR023794 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase GO:0019310|GO:0050112|GO:0055114 KEGG: 00521+1.1.1.18|KEGG: 00562+1.1.1.18|MetaCyc: PWY-5940|MetaCyc: PWY-7237|MetaCyc: PWY-7241 AMIS_48550 1d01e30ad0622c45aed999b51d8aa380 336 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 138 236 6.0E-8 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 AMIS_48550 1d01e30ad0622c45aed999b51d8aa380 336 Gene3D G3DSA:3.40.50.720 5 312 2.0E-100 T 14-10-2018 AMIS_48550 1d01e30ad0622c45aed999b51d8aa380 336 SUPERFAMILY SSF55347 130 281 1.57E-18 T 14-10-2018 AMIS_48550 1d01e30ad0622c45aed999b51d8aa380 336 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 123 1.1E-25 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AMIS_22150 73d959c49926fbc5f39522f537dea40c 196 Gene3D G3DSA:1.10.10.60 3 54 5.2E-23 T 14-10-2018 AMIS_22150 73d959c49926fbc5f39522f537dea40c 196 SUPERFAMILY SSF46689 6 71 3.25E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_22150 73d959c49926fbc5f39522f537dea40c 196 Gene3D G3DSA:1.10.357.10 55 196 1.1E-33 T 14-10-2018 AMIS_22150 73d959c49926fbc5f39522f537dea40c 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 5.3E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_22150 73d959c49926fbc5f39522f537dea40c 196 SUPERFAMILY SSF48498 76 193 1.15E-23 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_22150 73d959c49926fbc5f39522f537dea40c 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 4.4E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_22150 73d959c49926fbc5f39522f537dea40c 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 4.4E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_22150 73d959c49926fbc5f39522f537dea40c 196 Pfam PF16859 Bacterial transcriptional repressor C-terminal 75 186 4.8E-28 T 14-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AMIS_41490 aa00bf23f3d36d2fe204c021d2c7635f 585 Gene3D G3DSA:3.40.50.300 43 260 5.9E-25 T 14-10-2018 AMIS_41490 aa00bf23f3d36d2fe204c021d2c7635f 585 Pfam PF00350 Dynamin family 43 181 1.2E-11 T 14-10-2018 IPR022812 Dynamin superfamily AMIS_41490 aa00bf23f3d36d2fe204c021d2c7635f 585 SUPERFAMILY SSF52540 35 243 1.01E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_60080 2952601ec18a07416a9cf331d2044769 396 TIGRFAM TIGR04269 SAM_SPASM_FxsB: radical SAM/SPASM domain protein, FxsB family 24 383 1.6E-139 T 14-10-2018 IPR026335 Radical SAM/SPASM domain, FxsB family AMIS_60080 2952601ec18a07416a9cf331d2044769 396 Pfam PF13353 4Fe-4S single cluster domain 32 159 3.4E-8 T 14-10-2018 AMIS_60080 2952601ec18a07416a9cf331d2044769 396 Gene3D G3DSA:3.20.20.70 22 390 9.8E-70 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_60080 2952601ec18a07416a9cf331d2044769 396 SUPERFAMILY SSF102114 25 353 6.15E-29 T 14-10-2018 AMIS_60080 2952601ec18a07416a9cf331d2044769 396 Pfam PF04055 Radical SAM superfamily 32 179 4.1E-15 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMIS_39870 c92987cecaafbddce4cb428346341211 808 SMART SM00382 544 707 5.7E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_39870 c92987cecaafbddce4cb428346341211 808 SMART SM00382 211 355 9.7E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_39870 c92987cecaafbddce4cb428346341211 808 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 578 596 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 AMIS_39870 c92987cecaafbddce4cb428346341211 808 SUPERFAMILY SSF52540 171 434 2.56E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_39870 c92987cecaafbddce4cb428346341211 808 Gene3D G3DSA:1.10.8.60 714 806 9.3E-23 T 14-10-2018 AMIS_39870 c92987cecaafbddce4cb428346341211 808 SUPERFAMILY SSF81923 32 137 5.89E-16 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AMIS_39870 c92987cecaafbddce4cb428346341211 808 SMART SM01086 714 803 1.8E-30 T 14-10-2018 IPR019489 Clp ATPase, C-terminal AMIS_39870 c92987cecaafbddce4cb428346341211 808 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 216 326 1.7E-12 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMIS_39870 c92987cecaafbddce4cb428346341211 808 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 43 92 5.9E-7 T 14-10-2018 IPR004176 Clp, N-terminal AMIS_39870 c92987cecaafbddce4cb428346341211 808 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 115 151 2.8E-8 T 14-10-2018 IPR004176 Clp, N-terminal AMIS_39870 c92987cecaafbddce4cb428346341211 808 Gene3D G3DSA:1.10.1780.10 30 163 1.5E-26 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AMIS_39870 c92987cecaafbddce4cb428346341211 808 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 655 669 6.5E-38 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 AMIS_39870 c92987cecaafbddce4cb428346341211 808 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 548 566 6.5E-38 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 AMIS_39870 c92987cecaafbddce4cb428346341211 808 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 593 611 6.5E-38 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 AMIS_39870 c92987cecaafbddce4cb428346341211 808 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 622 640 6.5E-38 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 AMIS_39870 c92987cecaafbddce4cb428346341211 808 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 714 794 5.3E-21 T 14-10-2018 IPR019489 Clp ATPase, C-terminal AMIS_39870 c92987cecaafbddce4cb428346341211 808 Gene3D G3DSA:3.40.50.300 164 354 4.1E-66 T 14-10-2018 AMIS_39870 c92987cecaafbddce4cb428346341211 808 SUPERFAMILY SSF52540 493 799 4.03E-79 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_39870 c92987cecaafbddce4cb428346341211 808 Gene3D G3DSA:3.40.50.300 474 712 2.1E-94 T 14-10-2018 AMIS_39870 c92987cecaafbddce4cb428346341211 808 Pfam PF07724 AAA domain (Cdc48 subfamily) 543 708 5.4E-50 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMIS_39870 c92987cecaafbddce4cb428346341211 808 Gene3D G3DSA:3.40.50.300 355 473 3.5E-37 T 14-10-2018 AMIS_71120 9006b7f9c7b92db25b333c6c07a70ab1 169 Pfam PF13302 Acetyltransferase (GNAT) domain 2 139 3.7E-20 T 14-10-2018 IPR000182 GNAT domain AMIS_71120 9006b7f9c7b92db25b333c6c07a70ab1 169 Gene3D G3DSA:3.40.630.30 1 166 2.9E-42 T 14-10-2018 AMIS_71120 9006b7f9c7b92db25b333c6c07a70ab1 169 SUPERFAMILY SSF55729 1 163 1.8E-42 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_6410 1609f19a691fdf98d8168b8ec24b41fd 247 Pfam PF05690 Thiazole biosynthesis protein ThiG 7 239 1.4E-101 T 14-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 AMIS_6410 1609f19a691fdf98d8168b8ec24b41fd 247 Hamap MF_00443 Thiazole synthase [thiG]. 1 246 38.6 T 14-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 AMIS_6410 1609f19a691fdf98d8168b8ec24b41fd 247 Gene3D G3DSA:3.20.20.70 5 246 9.4E-103 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_6410 1609f19a691fdf98d8168b8ec24b41fd 247 SUPERFAMILY SSF110399 7 232 8.76E-81 T 14-10-2018 AMIS_14350 d792e2c4d42799e4a5faafc644287b7b 111 Gene3D G3DSA:3.40.30.10 15 108 3.1E-11 T 14-10-2018 AMIS_14350 d792e2c4d42799e4a5faafc644287b7b 111 SUPERFAMILY SSF52833 20 109 1.42E-15 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMIS_14350 d792e2c4d42799e4a5faafc644287b7b 111 Pfam PF00085 Thioredoxin 24 105 2.0E-8 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 AMIS_69080 bf2b55d717da588605adc7d30c5c4baa 293 Gene3D G3DSA:1.10.3720.10 53 270 6.5E-47 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_69080 bf2b55d717da588605adc7d30c5c4baa 293 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 65 160 6.7E-23 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 AMIS_69080 bf2b55d717da588605adc7d30c5c4baa 293 SUPERFAMILY SSF161098 63 268 6.93E-39 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_69080 bf2b55d717da588605adc7d30c5c4baa 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 268 4.0E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_37450 9aad5bb8e2340f8228e8dcdcb2c80ddf 388 Gene3D G3DSA:3.40.50.2300 6 144 9.4E-30 T 14-10-2018 AMIS_37450 9aad5bb8e2340f8228e8dcdcb2c80ddf 388 Pfam PF00072 Response regulator receiver domain 9 119 7.7E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_37450 9aad5bb8e2340f8228e8dcdcb2c80ddf 388 Gene3D G3DSA:1.10.3210.10 145 321 1.1E-5 T 14-10-2018 AMIS_37450 9aad5bb8e2340f8228e8dcdcb2c80ddf 388 SUPERFAMILY SSF52172 7 136 3.13E-28 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_37450 9aad5bb8e2340f8228e8dcdcb2c80ddf 388 SMART SM00448 7 119 5.0E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_69610 8a0332737c42b456afd13137c28c532c 151 SUPERFAMILY SSF89919 2 111 9.42E-29 T 14-10-2018 IPR023799 Ribosome-binding factor A domain superfamily AMIS_69610 8a0332737c42b456afd13137c28c532c 151 Pfam PF02033 Ribosome-binding factor A 7 108 1.6E-25 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 AMIS_69610 8a0332737c42b456afd13137c28c532c 151 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 95 3.0E-23 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 AMIS_69610 8a0332737c42b456afd13137c28c532c 151 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 5 108 24.168 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 AMIS_69610 8a0332737c42b456afd13137c28c532c 151 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 6 110 6.2E-24 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 AMIS_69610 8a0332737c42b456afd13137c28c532c 151 Gene3D G3DSA:3.30.300.20 1 102 1.3E-27 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta AMIS_69610 8a0332737c42b456afd13137c28c532c 151 ProSitePatterns PS01319 Ribosome-binding factor A signature. 74 95 - T 14-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 AMIS_72640 dbda1a679b4723e79198f5d3a34ff071 260 SUPERFAMILY SSF89392 46 239 7.06E-5 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX AMIS_32170 3eefb71baef5b300d5f58f3ced0dbe85 314 Pfam PF04321 RmlD substrate binding domain 9 271 3.7E-30 T 14-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 AMIS_32170 3eefb71baef5b300d5f58f3ced0dbe85 314 Gene3D G3DSA:3.40.50.720 5 281 2.7E-43 T 14-10-2018 AMIS_32170 3eefb71baef5b300d5f58f3ced0dbe85 314 SUPERFAMILY SSF51735 9 289 1.39E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_10220 d5d9dad055d36333db893c8da4af254c 653 Pfam PF01435 Peptidase family M48 69 287 1.7E-5 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AMIS_27910 ba9c11149d12a4f56b91bcd8527a5e80 382 SUPERFAMILY SSF51445 49 371 9.22E-99 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_27910 ba9c11149d12a4f56b91bcd8527a5e80 382 Pfam PF00331 Glycosyl hydrolase family 10 49 369 1.4E-95 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 AMIS_27910 ba9c11149d12a4f56b91bcd8527a5e80 382 Gene3D G3DSA:3.20.20.80 53 376 4.0E-103 T 14-10-2018 AMIS_27910 ba9c11149d12a4f56b91bcd8527a5e80 382 SMART SM00633 92 373 7.4E-91 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 AMIS_27910 ba9c11149d12a4f56b91bcd8527a5e80 382 PRINTS PR00134 Glycosyl hydrolase family 10 signature 123 135 1.0E-16 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 AMIS_27910 ba9c11149d12a4f56b91bcd8527a5e80 382 PRINTS PR00134 Glycosyl hydrolase family 10 signature 216 227 1.0E-16 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 AMIS_27910 ba9c11149d12a4f56b91bcd8527a5e80 382 PRINTS PR00134 Glycosyl hydrolase family 10 signature 171 182 1.0E-16 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 AMIS_27910 ba9c11149d12a4f56b91bcd8527a5e80 382 PRINTS PR00134 Glycosyl hydrolase family 10 signature 245 257 1.0E-16 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 AMIS_39990 c1fc06a287d89e5cc7e28ded15342a78 662 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 330 4.4E-75 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AMIS_39990 c1fc06a287d89e5cc7e28ded15342a78 662 SUPERFAMILY SSF51905 354 627 1.81E-38 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_39990 c1fc06a287d89e5cc7e28ded15342a78 662 Gene3D G3DSA:3.20.20.70 2 368 2.0E-116 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_39990 c1fc06a287d89e5cc7e28ded15342a78 662 Gene3D G3DSA:3.50.50.60 469 615 6.7E-105 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_39990 c1fc06a287d89e5cc7e28ded15342a78 662 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 496 514 4.4E-9 T 14-10-2018 AMIS_39990 c1fc06a287d89e5cc7e28ded15342a78 662 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 377 396 4.4E-9 T 14-10-2018 AMIS_39990 c1fc06a287d89e5cc7e28ded15342a78 662 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 608 624 4.4E-9 T 14-10-2018 AMIS_39990 c1fc06a287d89e5cc7e28ded15342a78 662 SUPERFAMILY SSF51395 2 366 5.64E-103 T 14-10-2018 AMIS_39990 c1fc06a287d89e5cc7e28ded15342a78 662 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 376 642 1.2E-25 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMIS_39990 c1fc06a287d89e5cc7e28ded15342a78 662 Gene3D G3DSA:3.40.50.720 375 655 6.7E-105 T 14-10-2018 AMIS_6290 bb4f9c10177b75b95f5e17ec9e70757f 126 PIRSF PIRSF002134 1 125 9.8E-43 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_6290 bb4f9c10177b75b95f5e17ec9e70757f 126 SUPERFAMILY SSF46946 2 122 1.2E-45 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 AMIS_6290 bb4f9c10177b75b95f5e17ec9e70757f 126 Gene3D G3DSA:4.10.910.10 73 126 7.3E-25 T 14-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_6290 bb4f9c10177b75b95f5e17ec9e70757f 126 ProSitePatterns PS00646 Ribosomal protein S13 signature. 88 101 - T 14-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_6290 bb4f9c10177b75b95f5e17ec9e70757f 126 Gene3D G3DSA:1.10.8.50 1 72 3.2E-29 T 14-10-2018 AMIS_6290 bb4f9c10177b75b95f5e17ec9e70757f 126 Pfam PF00416 Ribosomal protein S13/S18 3 109 1.7E-32 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_6290 bb4f9c10177b75b95f5e17ec9e70757f 126 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 115 5.0E-51 T 14-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_6290 bb4f9c10177b75b95f5e17ec9e70757f 126 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 119 26.791 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_73920 56ce7c04213024c2b4ebb81a1236542c 362 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AMIS_73920 56ce7c04213024c2b4ebb81a1236542c 362 Gene3D G3DSA:3.40.50.720 169 305 4.3E-111 T 14-10-2018 AMIS_73920 56ce7c04213024c2b4ebb81a1236542c 362 SUPERFAMILY SSF50129 310 361 1.27E-5 T 14-10-2018 IPR011032 GroES-like superfamily AMIS_73920 56ce7c04213024c2b4ebb81a1236542c 362 Pfam PF00107 Zinc-binding dehydrogenase 192 313 9.9E-23 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMIS_73920 56ce7c04213024c2b4ebb81a1236542c 362 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 149 2.3E-28 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMIS_73920 56ce7c04213024c2b4ebb81a1236542c 362 SUPERFAMILY SSF51735 154 327 4.27E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_73920 56ce7c04213024c2b4ebb81a1236542c 362 SMART SM00829 14 362 2.0E-8 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMIS_73920 56ce7c04213024c2b4ebb81a1236542c 362 Gene3D G3DSA:3.90.180.10 9 356 4.3E-111 T 14-10-2018 AMIS_73920 56ce7c04213024c2b4ebb81a1236542c 362 SUPERFAMILY SSF50129 8 183 2.89E-51 T 14-10-2018 IPR011032 GroES-like superfamily AMIS_66230 6129a6e4c39a6f63e78cbff172a9c43c 155 SUPERFAMILY SSF53098 8 147 4.43E-54 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily AMIS_66230 6129a6e4c39a6f63e78cbff172a9c43c 155 Pfam PF00075 RNase H 7 146 2.1E-48 T 14-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 AMIS_66230 6129a6e4c39a6f63e78cbff172a9c43c 155 Gene3D G3DSA:3.30.420.10 4 154 8.5E-56 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMIS_66230 6129a6e4c39a6f63e78cbff172a9c43c 155 Hamap MF_00042 Ribonuclease H [rnhA]. 5 155 32.819 T 14-10-2018 IPR022892 Ribonuclease HI GO:0004523 AMIS_32120 b26d684912bacf5f4290583a43da0dd9 214 Gene3D G3DSA:3.40.30.10 2 214 1.3E-63 T 14-10-2018 AMIS_32120 b26d684912bacf5f4290583a43da0dd9 214 SUPERFAMILY SSF52833 11 174 9.84E-16 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMIS_36880 4d5d9ea0f0c5a7cb7ba6ca135549d03d 771 SUPERFAMILY SSF55785 119 240 2.62E-20 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_36880 4d5d9ea0f0c5a7cb7ba6ca135549d03d 771 PRINTS PR00344 Bacterial sensor protein C-terminal signature 616 629 4.9E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_36880 4d5d9ea0f0c5a7cb7ba6ca135549d03d 771 PRINTS PR00344 Bacterial sensor protein C-terminal signature 579 589 4.9E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_36880 4d5d9ea0f0c5a7cb7ba6ca135549d03d 771 PRINTS PR00344 Bacterial sensor protein C-terminal signature 561 575 4.9E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_36880 4d5d9ea0f0c5a7cb7ba6ca135549d03d 771 PRINTS PR00344 Bacterial sensor protein C-terminal signature 592 610 4.9E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_36880 4d5d9ea0f0c5a7cb7ba6ca135549d03d 771 Gene3D G3DSA:3.30.565.10 471 639 1.6E-47 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_36880 4d5d9ea0f0c5a7cb7ba6ca135549d03d 771 Gene3D G3DSA:3.30.450.20 8 122 9.0E-25 T 14-10-2018 AMIS_36880 4d5d9ea0f0c5a7cb7ba6ca135549d03d 771 SMART SM00388 404 469 3.4E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_36880 4d5d9ea0f0c5a7cb7ba6ca135549d03d 771 SMART SM00448 652 763 2.5E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_36880 4d5d9ea0f0c5a7cb7ba6ca135549d03d 771 SMART SM00387 510 632 6.9E-31 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_36880 4d5d9ea0f0c5a7cb7ba6ca135549d03d 771 Pfam PF00512 His Kinase A (phospho-acceptor) domain 404 467 4.2E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_36880 4d5d9ea0f0c5a7cb7ba6ca135549d03d 771 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 245 379 9.5E-9 T 14-10-2018 IPR000014 PAS domain AMIS_36880 4d5d9ea0f0c5a7cb7ba6ca135549d03d 771 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 127 248 3.1E-19 T 14-10-2018 IPR000014 PAS domain AMIS_36880 4d5d9ea0f0c5a7cb7ba6ca135549d03d 771 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 10 125 1.2E-21 T 14-10-2018 IPR000014 PAS domain AMIS_36880 4d5d9ea0f0c5a7cb7ba6ca135549d03d 771 Gene3D G3DSA:3.30.450.20 125 245 5.8E-24 T 14-10-2018 AMIS_36880 4d5d9ea0f0c5a7cb7ba6ca135549d03d 771 Gene3D G3DSA:3.40.50.2300 651 771 3.4E-26 T 14-10-2018 AMIS_36880 4d5d9ea0f0c5a7cb7ba6ca135549d03d 771 Pfam PF00072 Response regulator receiver domain 654 763 1.1E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_36880 4d5d9ea0f0c5a7cb7ba6ca135549d03d 771 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 511 631 3.2E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_36880 4d5d9ea0f0c5a7cb7ba6ca135549d03d 771 Pfam PF00989 PAS fold 248 370 4.8E-9 T 14-10-2018 IPR013767 PAS fold GO:0006355 AMIS_36880 4d5d9ea0f0c5a7cb7ba6ca135549d03d 771 Pfam PF00989 PAS fold 10 116 3.0E-12 T 14-10-2018 IPR013767 PAS fold GO:0006355 AMIS_36880 4d5d9ea0f0c5a7cb7ba6ca135549d03d 771 Pfam PF08448 PAS fold 135 244 6.2E-12 T 14-10-2018 IPR013656 PAS fold-4 AMIS_36880 4d5d9ea0f0c5a7cb7ba6ca135549d03d 771 SUPERFAMILY SSF47384 392 467 4.32E-9 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_36880 4d5d9ea0f0c5a7cb7ba6ca135549d03d 771 Gene3D G3DSA:3.30.450.20 246 371 4.6E-16 T 14-10-2018 AMIS_36880 4d5d9ea0f0c5a7cb7ba6ca135549d03d 771 SUPERFAMILY SSF55785 16 125 8.52E-22 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_36880 4d5d9ea0f0c5a7cb7ba6ca135549d03d 771 SMART SM00086 201 242 540.0 T 14-10-2018 IPR001610 PAC motif AMIS_36880 4d5d9ea0f0c5a7cb7ba6ca135549d03d 771 SMART SM00086 79 120 4.8 T 14-10-2018 IPR001610 PAC motif AMIS_36880 4d5d9ea0f0c5a7cb7ba6ca135549d03d 771 SMART SM00086 333 373 8.5 T 14-10-2018 IPR001610 PAC motif AMIS_36880 4d5d9ea0f0c5a7cb7ba6ca135549d03d 771 SUPERFAMILY SSF55785 243 371 2.62E-12 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_36880 4d5d9ea0f0c5a7cb7ba6ca135549d03d 771 SMART SM00091 5 71 1.8E-10 T 14-10-2018 IPR000014 PAS domain AMIS_36880 4d5d9ea0f0c5a7cb7ba6ca135549d03d 771 SMART SM00091 128 193 2.1E-9 T 14-10-2018 IPR000014 PAS domain AMIS_36880 4d5d9ea0f0c5a7cb7ba6ca135549d03d 771 SMART SM00091 247 312 9.1E-5 T 14-10-2018 IPR000014 PAS domain AMIS_36880 4d5d9ea0f0c5a7cb7ba6ca135549d03d 771 SUPERFAMILY SSF55874 459 634 5.11E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_36880 4d5d9ea0f0c5a7cb7ba6ca135549d03d 771 Gene3D G3DSA:1.10.287.130 396 467 2.3E-18 T 14-10-2018 AMIS_36880 4d5d9ea0f0c5a7cb7ba6ca135549d03d 771 SUPERFAMILY SSF52172 651 768 2.28E-28 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_2790 7eac9a1ff8076bd5190e184c510681a6 406 Gene3D G3DSA:1.10.443.10 177 366 3.6E-45 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AMIS_2790 7eac9a1ff8076bd5190e184c510681a6 406 Pfam PF00589 Phage integrase family 176 350 2.0E-26 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMIS_2790 7eac9a1ff8076bd5190e184c510681a6 406 SUPERFAMILY SSF56349 57 354 2.05E-56 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMIS_2790 7eac9a1ff8076bd5190e184c510681a6 406 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 58 114 4.3E-7 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AMIS_2790 7eac9a1ff8076bd5190e184c510681a6 406 Gene3D G3DSA:1.10.150.130 53 176 1.0E-21 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal AMIS_61670 274893b2ef7be6e71b138230a17f0989 318 Hamap MF_02037 Histidine N-alpha-methyltransferase [egtD]. 1 317 58.079 T 14-10-2018 IPR032888 Histidine N-alpha-methyltransferase, Actinobacteria-type GO:0008276|GO:0052699 KEGG: 00340+2.1.1.44|MetaCyc: PWY-7255|MetaCyc: PWY-7550 AMIS_61670 274893b2ef7be6e71b138230a17f0989 318 Gene3D G3DSA:3.40.50.150 41 214 2.8E-54 T 14-10-2018 AMIS_61670 274893b2ef7be6e71b138230a17f0989 318 Gene3D G3DSA:3.40.50.150 263 317 6.9E-6 T 14-10-2018 AMIS_61670 274893b2ef7be6e71b138230a17f0989 318 PIRSF PIRSF018005 3 318 2.1E-128 T 14-10-2018 IPR017804 Methyltransferase EgtD-like GO:0008168 AMIS_61670 274893b2ef7be6e71b138230a17f0989 318 SUPERFAMILY SSF53335 32 215 1.99E-9 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_61670 274893b2ef7be6e71b138230a17f0989 318 Pfam PF10017 Histidine-specific methyltransferase, SAM-dependent 14 316 5.7E-115 T 14-10-2018 IPR019257 Histidine-specific methyltransferase, SAM-dependent AMIS_61670 274893b2ef7be6e71b138230a17f0989 318 TIGRFAM TIGR03438 egtD_ergothio: dimethylhistidine N-methyltransferase 14 314 3.0E-116 T 14-10-2018 IPR035094 Histidine N-alpha-methyltransferase KEGG: 00340+2.1.1.44|MetaCyc: PWY-7255|MetaCyc: PWY-7550 AMIS_57670 48af6735e69fb2d9eca9bcda7c0b70c5 289 Gene3D G3DSA:1.10.3720.10 46 285 1.2E-52 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_57670 48af6735e69fb2d9eca9bcda7c0b70c5 289 SUPERFAMILY SSF161098 4 285 1.4E-47 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_57670 48af6735e69fb2d9eca9bcda7c0b70c5 289 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 282 1.0E-11 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_11690 e946ce7708e3645e675b2693ee408dd7 546 SUPERFAMILY SSF55785 403 513 4.51E-13 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_11690 e946ce7708e3645e675b2693ee408dd7 546 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 404 516 7.0E-10 T 14-10-2018 IPR000014 PAS domain AMIS_11690 e946ce7708e3645e675b2693ee408dd7 546 Gene3D G3DSA:3.30.450.20 400 513 5.9E-13 T 14-10-2018 AMIS_11690 e946ce7708e3645e675b2693ee408dd7 546 Pfam PF08448 PAS fold 418 516 4.3E-6 T 14-10-2018 IPR013656 PAS fold-4 AMIS_11690 e946ce7708e3645e675b2693ee408dd7 546 SMART SM00091 407 472 2.9E-8 T 14-10-2018 IPR000014 PAS domain AMIS_21870 cf7bd572d0e8313cf497e96925346b96 331 Pfam PF00775 Dioxygenase 109 185 2.3E-8 T 14-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 AMIS_21870 cf7bd572d0e8313cf497e96925346b96 331 Gene3D G3DSA:2.60.130.10 36 248 3.8E-31 T 14-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AMIS_21870 cf7bd572d0e8313cf497e96925346b96 331 SUPERFAMILY SSF49482 14 278 3.53E-40 T 14-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AMIS_15970 eb4a5a650800234f5507c5a234ffcb62 123 SUPERFAMILY SSF103196 3 121 3.66E-5 T 14-10-2018 AMIS_44060 78d06a5b1e4dc944121cfe1282a3b2e2 401 Pfam PF07690 Major Facilitator Superfamily 22 232 1.1E-9 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_44060 78d06a5b1e4dc944121cfe1282a3b2e2 401 Gene3D G3DSA:1.20.1250.20 211 391 1.3E-21 T 14-10-2018 AMIS_44060 78d06a5b1e4dc944121cfe1282a3b2e2 401 SUPERFAMILY SSF103473 8 393 3.4E-37 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_44060 78d06a5b1e4dc944121cfe1282a3b2e2 401 Gene3D G3DSA:1.20.1250.20 13 198 7.0E-14 T 14-10-2018 AMIS_50620 dd1d382b66b958b49677d816cb820980 332 Pfam PF01370 NAD dependent epimerase/dehydratase family 9 248 9.9E-38 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AMIS_50620 dd1d382b66b958b49677d816cb820980 332 SUPERFAMILY SSF51735 8 324 4.26E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_50620 dd1d382b66b958b49677d816cb820980 332 Gene3D G3DSA:3.40.50.720 9 326 2.0E-47 T 14-10-2018 AMIS_2870 72fb62f5988c62de3c5c06d8f88d8f6d 383 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 26 170 6.2E-44 T 14-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_2870 72fb62f5988c62de3c5c06d8f88d8f6d 383 SUPERFAMILY SSF52833 18 178 4.81E-49 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMIS_2870 72fb62f5988c62de3c5c06d8f88d8f6d 383 Gene3D G3DSA:1.10.10.1590 17 87 9.1E-23 T 14-10-2018 AMIS_2870 72fb62f5988c62de3c5c06d8f88d8f6d 383 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 26 170 7.7E-48 T 14-10-2018 AMIS_2870 72fb62f5988c62de3c5c06d8f88d8f6d 383 Gene3D G3DSA:3.40.30.10 88 192 5.2E-26 T 14-10-2018 AMIS_16270 fd98664c5f684c92fc2263eceaa5becb 375 SUPERFAMILY SSF101960 26 370 7.59E-85 T 14-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily AMIS_16270 fd98664c5f684c92fc2263eceaa5becb 375 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 96 362 4.4E-75 T 14-10-2018 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 AMIS_16270 fd98664c5f684c92fc2263eceaa5becb 375 Pfam PF01458 Uncharacterized protein family (UPF0051) 124 345 2.8E-70 T 14-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 AMIS_35800 02ad8f7f779c67b8719ac2fa5addae7e 168 SUPERFAMILY SSF55961 2 122 4.4E-19 T 14-10-2018 AMIS_35800 02ad8f7f779c67b8719ac2fa5addae7e 168 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 2 77 1.3E-6 T 14-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like AMIS_35800 02ad8f7f779c67b8719ac2fa5addae7e 168 Gene3D G3DSA:3.30.530.20 1 143 8.3E-28 T 14-10-2018 IPR023393 START-like domain superfamily AMIS_46550 f8e2f1b661438d3761718cfd4917437f 511 Pfam PF08666 SAF domain 18 87 4.1E-9 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AMIS_46550 f8e2f1b661438d3761718cfd4917437f 511 SMART SM00858 17 88 4.0E-14 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AMIS_46550 f8e2f1b661438d3761718cfd4917437f 511 Gene3D G3DSA:3.90.1210.30 10 90 1.8E-24 T 14-10-2018 AMIS_46550 f8e2f1b661438d3761718cfd4917437f 511 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 112 509 2.4E-160 T 14-10-2018 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 AMIS_25470 592d9206470adba1771ba98b90c0283b 216 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 8 183 3.2E-18 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMIS_25470 592d9206470adba1771ba98b90c0283b 216 SUPERFAMILY SSF56784 5 215 2.3E-54 T 14-10-2018 IPR036412 HAD-like superfamily AMIS_25470 592d9206470adba1771ba98b90c0283b 216 Gene3D G3DSA:3.40.50.1000 8 194 3.7E-58 T 14-10-2018 IPR023214 HAD superfamily AMIS_25470 592d9206470adba1771ba98b90c0283b 216 Gene3D G3DSA:1.10.150.240 20 86 3.7E-58 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AMIS_25470 592d9206470adba1771ba98b90c0283b 216 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 184 1.0E-21 T 14-10-2018 AMIS_25470 592d9206470adba1771ba98b90c0283b 216 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 46 179 8.3E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMIS_23500 1e1c4c777e484938185a313a4272f8a4 465 Gene3D G3DSA:3.40.190.10 97 411 3.4E-55 T 14-10-2018 AMIS_23500 1e1c4c777e484938185a313a4272f8a4 465 Gene3D G3DSA:3.40.190.10 179 437 3.4E-55 T 14-10-2018 AMIS_23500 1e1c4c777e484938185a313a4272f8a4 465 Pfam PF01547 Bacterial extracellular solute-binding protein 71 368 3.4E-16 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein AMIS_23500 1e1c4c777e484938185a313a4272f8a4 465 SUPERFAMILY SSF53850 54 456 1.15E-43 T 14-10-2018 AMIS_23500 1e1c4c777e484938185a313a4272f8a4 465 TIGRFAM TIGR03851 chitin_NgcE: carbohydrate ABC transporter, N-acetylglucosamine/diacetylchitobiose-binding protein 20 462 5.1E-164 T 14-10-2018 IPR022386 Carbohydrate ABC transporter, N-acetylglucosamine/diacetylchitobiose-binding protein AMIS_16490 46467ae0a6d67d37c3c07aac64d35ccc 294 Gene3D G3DSA:1.10.510.10 190 291 3.2E-19 T 14-10-2018 AMIS_16490 46467ae0a6d67d37c3c07aac64d35ccc 294 SMART SM00090 33 289 4.3E-7 T 14-10-2018 IPR000687 RIO kinase GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1|Reactome: R-HSA-6791226 AMIS_16490 46467ae0a6d67d37c3c07aac64d35ccc 294 SUPERFAMILY SSF56112 66 252 4.37E-12 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMIS_16490 46467ae0a6d67d37c3c07aac64d35ccc 294 Pfam PF01163 RIO1 family 116 281 1.4E-28 T 14-10-2018 AMIS_10780 114a7436a93e583794d7a85b1d9fb02f 484 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 269 284 8.3E-44 T 14-10-2018 AMIS_10780 114a7436a93e583794d7a85b1d9fb02f 484 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 320 336 8.3E-44 T 14-10-2018 AMIS_10780 114a7436a93e583794d7a85b1d9fb02f 484 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 302 320 8.3E-44 T 14-10-2018 AMIS_10780 114a7436a93e583794d7a85b1d9fb02f 484 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 284 300 8.3E-44 T 14-10-2018 AMIS_10780 114a7436a93e583794d7a85b1d9fb02f 484 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 8.3E-44 T 14-10-2018 AMIS_10780 114a7436a93e583794d7a85b1d9fb02f 484 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 152 167 8.3E-44 T 14-10-2018 AMIS_10780 114a7436a93e583794d7a85b1d9fb02f 484 Gene3D G3DSA:3.30.70.2450 181 258 5.4E-96 T 14-10-2018 AMIS_10780 114a7436a93e583794d7a85b1d9fb02f 484 SUPERFAMILY SSF51905 6 362 6.76E-58 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_10780 114a7436a93e583794d7a85b1d9fb02f 484 Gene3D G3DSA:3.50.50.60 8 335 5.4E-96 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_10780 114a7436a93e583794d7a85b1d9fb02f 484 Pfam PF01494 FAD binding domain 6 333 1.4E-75 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 AMIS_14830 3e81286c988bcfa5549581421e7cef75 132 SUPERFAMILY SSF54427 2 132 5.94E-26 T 14-10-2018 IPR032710 NTF2-like domain superfamily AMIS_14830 3e81286c988bcfa5549581421e7cef75 132 Pfam PF12680 SnoaL-like domain 14 118 2.4E-11 T 14-10-2018 IPR037401 SnoaL-like domain AMIS_14830 3e81286c988bcfa5549581421e7cef75 132 Gene3D G3DSA:3.10.450.50 2 132 7.6E-36 T 14-10-2018 AMIS_50180 414b11155bfce258c4f21dedad8d8f17 564 SUPERFAMILY SSF53067 1 326 2.85E-17 T 14-10-2018 AMIS_50180 414b11155bfce258c4f21dedad8d8f17 564 Gene3D G3DSA:3.30.420.40 10 323 4.2E-83 T 14-10-2018 AMIS_50180 414b11155bfce258c4f21dedad8d8f17 564 Gene3D G3DSA:3.30.420.350 123 316 4.2E-83 T 14-10-2018 AMIS_50180 414b11155bfce258c4f21dedad8d8f17 564 Gene3D G3DSA:3.90.870.20 333 535 8.0E-75 T 14-10-2018 IPR038152 Carbamoyltransferase, C-terminal domain superfamily AMIS_50180 414b11155bfce258c4f21dedad8d8f17 564 SUPERFAMILY SSF55821 358 535 3.66E-8 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AMIS_50180 414b11155bfce258c4f21dedad8d8f17 564 Pfam PF16861 Carbamoyltransferase C-terminus 368 535 1.0E-64 T 14-10-2018 IPR031730 Carbamoyltransferase, C-terminal AMIS_50180 414b11155bfce258c4f21dedad8d8f17 564 Pfam PF02543 Carbamoyltransferase N-terminus 113 323 2.0E-45 T 14-10-2018 IPR003696 Carbamoyltransferase GO:0003824|GO:0009058 AMIS_50180 414b11155bfce258c4f21dedad8d8f17 564 Pfam PF02543 Carbamoyltransferase N-terminus 2 74 3.1E-8 T 14-10-2018 IPR003696 Carbamoyltransferase GO:0003824|GO:0009058 AMIS_37500 7541ef79bb8eca81fe3540d74485da76 503 SUPERFAMILY SSF52540 8 235 7.0E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_37500 7541ef79bb8eca81fe3540d74485da76 503 Gene3D G3DSA:3.40.50.300 270 498 4.7E-37 T 14-10-2018 AMIS_37500 7541ef79bb8eca81fe3540d74485da76 503 Gene3D G3DSA:3.40.50.300 1 253 1.5E-58 T 14-10-2018 AMIS_37500 7541ef79bb8eca81fe3540d74485da76 503 ProSitePatterns PS00211 ABC transporters family signature. 404 418 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_37500 7541ef79bb8eca81fe3540d74485da76 503 SMART SM00382 34 225 4.4E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_37500 7541ef79bb8eca81fe3540d74485da76 503 SMART SM00382 285 479 0.0021 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_37500 7541ef79bb8eca81fe3540d74485da76 503 Pfam PF00005 ABC transporter 277 432 3.4E-16 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_37500 7541ef79bb8eca81fe3540d74485da76 503 Pfam PF00005 ABC transporter 26 177 4.8E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_37500 7541ef79bb8eca81fe3540d74485da76 503 SUPERFAMILY SSF52540 258 488 6.13E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_51550 6c6e64d88d0d685429e57585e16fd996 329 SUPERFAMILY SSF47413 4 61 1.69E-9 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_51550 6c6e64d88d0d685429e57585e16fd996 329 SUPERFAMILY SSF53822 70 328 1.19E-42 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_51550 6c6e64d88d0d685429e57585e16fd996 329 SMART SM00354 4 72 8.4E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_51550 6c6e64d88d0d685429e57585e16fd996 329 Gene3D G3DSA:3.40.50.2300 161 287 2.5E-46 T 14-10-2018 AMIS_51550 6c6e64d88d0d685429e57585e16fd996 329 Gene3D G3DSA:3.40.50.2300 58 302 2.5E-46 T 14-10-2018 AMIS_51550 6c6e64d88d0d685429e57585e16fd996 329 Pfam PF13377 Periplasmic binding protein-like domain 170 325 5.0E-28 T 14-10-2018 AMIS_51550 6c6e64d88d0d685429e57585e16fd996 329 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 48 4.1E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_51550 6c6e64d88d0d685429e57585e16fd996 329 Gene3D G3DSA:1.10.260.40 1 57 1.7E-12 T 14-10-2018 AMIS_69760 308425cff0df9e2493e7942368eb8f75 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 8.6E-47 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_69760 308425cff0df9e2493e7942368eb8f75 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 8.6E-47 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_69760 308425cff0df9e2493e7942368eb8f75 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 8.6E-47 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_69760 308425cff0df9e2493e7942368eb8f75 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 8.6E-47 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_69760 308425cff0df9e2493e7942368eb8f75 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 8.6E-47 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_69760 308425cff0df9e2493e7942368eb8f75 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 8.6E-47 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_69760 308425cff0df9e2493e7942368eb8f75 256 Gene3D G3DSA:3.40.50.720 4 256 1.3E-90 T 14-10-2018 AMIS_69760 308425cff0df9e2493e7942368eb8f75 256 SUPERFAMILY SSF51735 7 249 2.33E-82 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_69760 308425cff0df9e2493e7942368eb8f75 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 249 4.6E-74 T 14-10-2018 AMIS_69760 308425cff0df9e2493e7942368eb8f75 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 3.4E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_69760 308425cff0df9e2493e7942368eb8f75 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 3.4E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_69760 308425cff0df9e2493e7942368eb8f75 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 3.4E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_17290 315168001d24567981759bd4c27c80ba 394 PRINTS PR00359 B-class P450 signature 347 358 1.1E-7 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_17290 315168001d24567981759bd4c27c80ba 394 PRINTS PR00359 B-class P450 signature 274 285 1.1E-7 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_17290 315168001d24567981759bd4c27c80ba 394 PRINTS PR00359 B-class P450 signature 291 318 1.1E-7 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_17290 315168001d24567981759bd4c27c80ba 394 PRINTS PR00359 B-class P450 signature 338 347 1.1E-7 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_17290 315168001d24567981759bd4c27c80ba 394 Gene3D G3DSA:1.10.630.10 80 393 2.2E-27 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_17290 315168001d24567981759bd4c27c80ba 394 Pfam PF00067 Cytochrome P450 272 362 1.6E-6 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_17290 315168001d24567981759bd4c27c80ba 394 SUPERFAMILY SSF48264 45 376 5.5E-30 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_17290 315168001d24567981759bd4c27c80ba 394 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 340 349 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 AMIS_49180 81082b912f50ccd71f3aa58d34956040 308 SUPERFAMILY SSF161098 77 297 1.02E-50 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_49180 81082b912f50ccd71f3aa58d34956040 308 Gene3D G3DSA:1.10.3720.10 75 307 2.0E-56 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_49180 81082b912f50ccd71f3aa58d34956040 308 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 108 299 3.3E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_70890 7e9501db329ca784bb809d9d6514126d 218 TIGRFAM TIGR03552 F420_cofC: 2-phospho-L-lactate guanylyltransferase 11 201 7.8E-47 T 14-10-2018 IPR002835 2-phospho-L-lactate guanylyltransferase, CofC GO:0016779 KEGG: 00680+2.7.7.68|MetaCyc: PWY-5198 AMIS_70890 7e9501db329ca784bb809d9d6514126d 218 SUPERFAMILY SSF53448 10 209 9.09E-34 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_70890 7e9501db329ca784bb809d9d6514126d 218 Hamap MF_02114 2-phospho-L-lactate guanylyltransferase [cofC]. 10 208 21.719 T 14-10-2018 IPR002835 2-phospho-L-lactate guanylyltransferase, CofC GO:0016779 KEGG: 00680+2.7.7.68|MetaCyc: PWY-5198 AMIS_70890 7e9501db329ca784bb809d9d6514126d 218 Gene3D G3DSA:3.90.550.10 7 190 4.2E-42 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_70890 7e9501db329ca784bb809d9d6514126d 218 Pfam PF01983 Guanylyl transferase CofC like 12 213 3.1E-11 T 14-10-2018 IPR002835 2-phospho-L-lactate guanylyltransferase, CofC GO:0016779 KEGG: 00680+2.7.7.68|MetaCyc: PWY-5198 AMIS_43990 e8f6fb15f745568bec0485bb72809a70 529 Pfam PF00544 Pectate lyase 288 461 6.9E-34 T 14-10-2018 IPR002022 Pectate lyase AMIS_43990 e8f6fb15f745568bec0485bb72809a70 529 SUPERFAMILY SSF49899 51 175 1.48E-6 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily AMIS_43990 e8f6fb15f745568bec0485bb72809a70 529 Gene3D G3DSA:2.160.20.10 226 529 3.0E-89 T 14-10-2018 IPR012334 Pectin lyase fold AMIS_43990 e8f6fb15f745568bec0485bb72809a70 529 SMART SM00656 248 467 2.5E-36 T 14-10-2018 IPR002022 Pectate lyase AMIS_43990 e8f6fb15f745568bec0485bb72809a70 529 Gene3D G3DSA:2.60.120.560 35 193 2.0E-31 T 14-10-2018 AMIS_43990 e8f6fb15f745568bec0485bb72809a70 529 SUPERFAMILY SSF51126 225 528 2.09E-68 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor AMIS_8740 e0441f4087df1f42d7db0887ec3cccdc 526 Pfam PF00512 His Kinase A (phospho-acceptor) domain 281 347 1.8E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_8740 e0441f4087df1f42d7db0887ec3cccdc 526 Gene3D G3DSA:1.10.287.130 276 352 1.8E-17 T 14-10-2018 AMIS_8740 e0441f4087df1f42d7db0887ec3cccdc 526 PRINTS PR00344 Bacterial sensor protein C-terminal signature 488 501 1.1E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_8740 e0441f4087df1f42d7db0887ec3cccdc 526 PRINTS PR00344 Bacterial sensor protein C-terminal signature 464 482 1.1E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_8740 e0441f4087df1f42d7db0887ec3cccdc 526 PRINTS PR00344 Bacterial sensor protein C-terminal signature 447 457 1.1E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_8740 e0441f4087df1f42d7db0887ec3cccdc 526 PRINTS PR00344 Bacterial sensor protein C-terminal signature 429 443 1.1E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMIS_8740 e0441f4087df1f42d7db0887ec3cccdc 526 Gene3D G3DSA:1.20.1480.50 187 275 5.8E-10 T 14-10-2018 AMIS_8740 e0441f4087df1f42d7db0887ec3cccdc 526 Gene3D G3DSA:3.30.565.10 353 504 5.1E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_8740 e0441f4087df1f42d7db0887ec3cccdc 526 SMART SM00388 280 347 8.7E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMIS_8740 e0441f4087df1f42d7db0887ec3cccdc 526 SMART SM00304 220 272 6.0E-13 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_8740 e0441f4087df1f42d7db0887ec3cccdc 526 SMART SM00387 393 504 4.6E-32 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_8740 e0441f4087df1f42d7db0887ec3cccdc 526 SUPERFAMILY SSF47384 263 347 8.63E-17 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMIS_8740 e0441f4087df1f42d7db0887ec3cccdc 526 SUPERFAMILY SSF158472 220 270 2.35E-8 T 14-10-2018 AMIS_8740 e0441f4087df1f42d7db0887ec3cccdc 526 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 394 502 1.3E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_8740 e0441f4087df1f42d7db0887ec3cccdc 526 Pfam PF00672 HAMP domain 220 269 1.8E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_8740 e0441f4087df1f42d7db0887ec3cccdc 526 SUPERFAMILY SSF55874 337 503 2.88E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_16970 758c9d47992fb939a437ce83b3db74ea 295 SUPERFAMILY SSF161098 50 283 1.02E-44 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_16970 758c9d47992fb939a437ce83b3db74ea 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 287 8.6E-9 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_16970 758c9d47992fb939a437ce83b3db74ea 295 Gene3D G3DSA:1.10.3720.10 46 294 5.1E-56 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_18460 c036e1711c6c392f98c413ebb284d6c0 269 Pfam PF13649 Methyltransferase domain 48 144 3.4E-13 T 14-10-2018 AMIS_18460 c036e1711c6c392f98c413ebb284d6c0 269 SUPERFAMILY SSF53335 15 159 3.41E-27 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_58430 bb62ba931fbb38ab72a77fd84d257558 70 Gene3D G3DSA:3.30.160.250 5 65 6.7E-10 T 14-10-2018 AMIS_58430 bb62ba931fbb38ab72a77fd84d257558 70 SUPERFAMILY SSF143100 4 52 4.58E-12 T 14-10-2018 IPR035069 TTHA1013/TTHA0281-like AMIS_6600 140e9ce52b9f040e148505b8876e4aa1 250 Gene3D G3DSA:2.60.40.2880 161 247 2.2E-13 T 14-10-2018 IPR038468 Transport accessory protein MmpS, soluble domain superfamily AMIS_6600 140e9ce52b9f040e148505b8876e4aa1 250 Pfam PF05423 Mycobacterium membrane protein 162 245 3.1E-9 T 14-10-2018 IPR008693 Transport accessory protein MmpS AMIS_30690 b03224f4649f33e0b23c52a1a4f70bdd 274 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 15 239 2.2E-105 T 14-10-2018 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 KEGG: 00190+2.7.4.1 AMIS_30690 b03224f4649f33e0b23c52a1a4f70bdd 274 Gene3D G3DSA:3.40.50.300 1 255 2.9E-88 T 14-10-2018 AMIS_30690 b03224f4649f33e0b23c52a1a4f70bdd 274 PIRSF PIRSF028756 1 268 1.6E-112 T 14-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 AMIS_30690 b03224f4649f33e0b23c52a1a4f70bdd 274 SUPERFAMILY SSF52540 48 236 1.77E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_30690 b03224f4649f33e0b23c52a1a4f70bdd 274 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 16 238 3.0E-95 T 14-10-2018 IPR022488 Polyphosphate kinase-2-related AMIS_4220 53c38f56672701afad0c149b759dbdfc 80 SUPERFAMILY SSF47336 5 74 2.36E-10 T 14-10-2018 IPR036736 ACP-like superfamily AMIS_4220 53c38f56672701afad0c149b759dbdfc 80 Pfam PF00550 Phosphopantetheine attachment site 5 70 1.3E-6 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain AMIS_4220 53c38f56672701afad0c149b759dbdfc 80 Gene3D G3DSA:1.10.1200.10 2 76 3.5E-16 T 14-10-2018 IPR036736 ACP-like superfamily AMIS_70320 527eb83fdb37e6304eaa3e1893321abc 176 SUPERFAMILY SSF88659 96 153 3.49E-14 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_70320 527eb83fdb37e6304eaa3e1893321abc 176 Pfam PF08281 Sigma-70, region 4 101 149 1.0E-13 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_70320 527eb83fdb37e6304eaa3e1893321abc 176 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 6 154 4.5E-19 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_70320 527eb83fdb37e6304eaa3e1893321abc 176 TIGRFAM TIGR02983 SigE-fam_strep: RNA polymerase sigma-70 factor, sigma-E family 4 155 3.4E-45 T 14-10-2018 IPR014325 RNA polymerase sigma-E factor, actinobacteria GO:0016987 AMIS_70320 527eb83fdb37e6304eaa3e1893321abc 176 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 32 63 - T 14-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_70320 527eb83fdb37e6304eaa3e1893321abc 176 SUPERFAMILY SSF88946 5 95 3.49E-17 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_70320 527eb83fdb37e6304eaa3e1893321abc 176 Gene3D G3DSA:1.10.1740.10 2 80 1.4E-11 T 14-10-2018 AMIS_70320 527eb83fdb37e6304eaa3e1893321abc 176 Gene3D G3DSA:1.10.10.10 95 157 2.5E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_70320 527eb83fdb37e6304eaa3e1893321abc 176 Pfam PF04542 Sigma-70 region 2 10 74 2.1E-11 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_15150 8a675cd060de03feb37d5c36c4bb59b4 143 Pfam PF02381 MraZ protein, putative antitoxin-like 1 70 1.9E-19 T 14-10-2018 IPR020603 MraZ domain AMIS_15150 8a675cd060de03feb37d5c36c4bb59b4 143 Pfam PF02381 MraZ protein, putative antitoxin-like 72 136 1.8E-17 T 14-10-2018 IPR020603 MraZ domain AMIS_15150 8a675cd060de03feb37d5c36c4bb59b4 143 Gene3D G3DSA:2.40.330.20 1 139 3.0E-46 T 14-10-2018 IPR038619 MraZ superfamily AMIS_15150 8a675cd060de03feb37d5c36c4bb59b4 143 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 143 52.833 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 AMIS_15150 8a675cd060de03feb37d5c36c4bb59b4 143 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 129 8.0E-52 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 AMIS_15150 8a675cd060de03feb37d5c36c4bb59b4 143 SUPERFAMILY SSF89447 1 136 2.02E-46 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily AMIS_15150 8a675cd060de03feb37d5c36c4bb59b4 143 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 136 1.5E-39 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 AMIS_71040 d62d13996c1f3aecc05e692a6d244f35 80 Gene3D G3DSA:1.10.260.40 6 69 2.7E-21 T 14-10-2018 AMIS_71040 d62d13996c1f3aecc05e692a6d244f35 80 SUPERFAMILY SSF47413 8 68 1.85E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_71040 d62d13996c1f3aecc05e692a6d244f35 80 Pfam PF01381 Helix-turn-helix 10 62 4.4E-16 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMIS_71040 d62d13996c1f3aecc05e692a6d244f35 80 SMART SM00530 9 64 1.5E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMIS_58030 5dc60215309c5d44c00561716e88f1c6 597 SUPERFAMILY SSF50974 251 567 4.71E-28 T 14-10-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 AMIS_58030 5dc60215309c5d44c00561716e88f1c6 597 Gene3D G3DSA:3.30.420.40 29 94 9.5E-10 T 14-10-2018 AMIS_58030 5dc60215309c5d44c00561716e88f1c6 597 Gene3D G3DSA:2.130.10.10 416 594 8.6E-20 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_58030 5dc60215309c5d44c00561716e88f1c6 597 Gene3D G3DSA:3.30.420.40 95 126 9.5E-10 T 14-10-2018 AMIS_58030 5dc60215309c5d44c00561716e88f1c6 597 Pfam PF07676 WD40-like Beta Propeller Repeat 420 439 0.19 T 14-10-2018 IPR011659 WD40-like Beta Propeller AMIS_58030 5dc60215309c5d44c00561716e88f1c6 597 Gene3D G3DSA:2.130.10.10 244 409 1.4E-7 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_46480 3c790715657f88f1073bf6ebaa6d2f13 205 Gene3D G3DSA:3.40.430.10 2 186 1.2E-29 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AMIS_46480 3c790715657f88f1073bf6ebaa6d2f13 205 SUPERFAMILY SSF53597 34 185 6.54E-18 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AMIS_46480 3c790715657f88f1073bf6ebaa6d2f13 205 Pfam PF01872 RibD C-terminal domain 113 168 2.8E-8 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 AMIS_23140 6038fdc9fe8b625be4c09c8705f96dfb 491 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 288 302 5.4E-37 T 14-10-2018 AMIS_23140 6038fdc9fe8b625be4c09c8705f96dfb 491 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 206 231 5.4E-37 T 14-10-2018 AMIS_23140 6038fdc9fe8b625be4c09c8705f96dfb 491 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 369 390 5.4E-37 T 14-10-2018 AMIS_23140 6038fdc9fe8b625be4c09c8705f96dfb 491 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 431 446 5.4E-37 T 14-10-2018 AMIS_23140 6038fdc9fe8b625be4c09c8705f96dfb 491 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 5.4E-37 T 14-10-2018 AMIS_23140 6038fdc9fe8b625be4c09c8705f96dfb 491 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 330 337 5.4E-37 T 14-10-2018 AMIS_23140 6038fdc9fe8b625be4c09c8705f96dfb 491 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 374 474 4.3E-10 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AMIS_23140 6038fdc9fe8b625be4c09c8705f96dfb 491 SUPERFAMILY SSF55424 373 478 2.41E-14 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AMIS_23140 6038fdc9fe8b625be4c09c8705f96dfb 491 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 339 2.3E-43 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMIS_23140 6038fdc9fe8b625be4c09c8705f96dfb 491 PIRSF PIRSF000350 152 478 6.4E-49 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 AMIS_23140 6038fdc9fe8b625be4c09c8705f96dfb 491 PIRSF PIRSF000350 1 154 1.0E-13 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 AMIS_23140 6038fdc9fe8b625be4c09c8705f96dfb 491 SUPERFAMILY SSF51905 1 360 1.47E-43 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_23140 6038fdc9fe8b625be4c09c8705f96dfb 491 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 166 184 9.4E-20 T 14-10-2018 AMIS_23140 6038fdc9fe8b625be4c09c8705f96dfb 491 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 9.4E-20 T 14-10-2018 AMIS_23140 6038fdc9fe8b625be4c09c8705f96dfb 491 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 206 224 9.4E-20 T 14-10-2018 AMIS_23140 6038fdc9fe8b625be4c09c8705f96dfb 491 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 287 303 9.4E-20 T 14-10-2018 AMIS_23140 6038fdc9fe8b625be4c09c8705f96dfb 491 Gene3D G3DSA:3.30.390.30 373 487 2.2E-16 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AMIS_66520 5044f479d21862aa644150b89c24e493 278 Gene3D G3DSA:3.40.50.80 130 274 1.3E-49 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMIS_66520 5044f479d21862aa644150b89c24e493 278 Gene3D G3DSA:2.40.30.10 4 128 1.8E-33 T 14-10-2018 AMIS_66520 5044f479d21862aa644150b89c24e493 278 SUPERFAMILY SSF63380 9 129 1.98E-9 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AMIS_66520 5044f479d21862aa644150b89c24e493 278 Pfam PF08021 Siderophore-interacting FAD-binding domain 14 127 3.7E-34 T 14-10-2018 IPR013113 FAD-binding 9, siderophore-interacting AMIS_66520 5044f479d21862aa644150b89c24e493 278 Pfam PF04954 Siderophore-interacting protein 135 252 1.6E-37 T 14-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain AMIS_36720 cc0556df0a687e70c1705726078a7d57 367 SMART SM00637 272 363 1.1E-33 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 AMIS_36720 cc0556df0a687e70c1705726078a7d57 367 SUPERFAMILY SSF49384 267 361 5.09E-26 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 AMIS_36720 cc0556df0a687e70c1705726078a7d57 367 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 35 226 4.9E-32 T 14-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal AMIS_36720 cc0556df0a687e70c1705726078a7d57 367 Gene3D G3DSA:2.70.50.50 35 228 1.8E-63 T 14-10-2018 AMIS_36720 cc0556df0a687e70c1705726078a7d57 367 Pfam PF00553 Cellulose binding domain 272 360 1.1E-23 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 AMIS_36720 cc0556df0a687e70c1705726078a7d57 367 SUPERFAMILY SSF81296 35 230 2.94E-30 T 14-10-2018 IPR014756 Immunoglobulin E-set AMIS_36720 cc0556df0a687e70c1705726078a7d57 367 Gene3D G3DSA:2.60.40.290 269 367 3.1E-25 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 AMIS_22820 3f158f2d8485703623d0e706190cf024 265 SUPERFAMILY SSF56112 40 209 7.53E-18 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMIS_22820 3f158f2d8485703623d0e706190cf024 265 Pfam PF01636 Phosphotransferase enzyme family 148 214 1.2E-7 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase AMIS_22820 3f158f2d8485703623d0e706190cf024 265 Gene3D G3DSA:3.90.1200.10 137 214 1.2E-6 T 14-10-2018 AMIS_58690 224bc637cfcc954d4c8c86af45db5c96 283 Gene3D G3DSA:3.40.1090.10 3 98 1.3E-24 T 14-10-2018 AMIS_58690 224bc637cfcc954d4c8c86af45db5c96 283 Gene3D G3DSA:3.40.1090.10 99 205 1.1E-15 T 14-10-2018 AMIS_58690 224bc637cfcc954d4c8c86af45db5c96 283 Pfam PF01734 Patatin-like phospholipase 13 170 3.9E-26 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 AMIS_58690 224bc637cfcc954d4c8c86af45db5c96 283 SUPERFAMILY SSF52151 8 269 9.68E-56 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMIS_6780 52cc27eff8f07091d54b58cbffb4b110 395 Gene3D G3DSA:3.40.50.150 86 255 8.5E-37 T 14-10-2018 AMIS_6780 52cc27eff8f07091d54b58cbffb4b110 395 SUPERFAMILY SSF53335 66 196 6.01E-24 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_6780 52cc27eff8f07091d54b58cbffb4b110 395 Pfam PF13649 Methyltransferase domain 106 171 1.2E-6 T 14-10-2018 AMIS_70750 ce4a3df94fef7d225f18249fcf0f7d92 110 SUPERFAMILY SSF56399 1 106 3.45E-22 T 14-10-2018 AMIS_70750 ce4a3df94fef7d225f18249fcf0f7d92 110 Gene3D G3DSA:3.20.170.20 1 108 2.2E-29 T 14-10-2018 AMIS_70750 ce4a3df94fef7d225f18249fcf0f7d92 110 Pfam PF06108 Protein of unknown function (DUF952) 5 95 2.1E-21 T 14-10-2018 IPR009297 Protein of unknown function DUF952 AMIS_28240 4bd4044abcaaef3050f23ba79a6750f6 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 5 55 1.1E-22 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_28240 4bd4044abcaaef3050f23ba79a6750f6 55 SUPERFAMILY SSF57829 5 55 2.69E-17 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 AMIS_28240 4bd4044abcaaef3050f23ba79a6750f6 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 7 55 14.505 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_28240 4bd4044abcaaef3050f23ba79a6750f6 55 Pfam PF00471 Ribosomal protein L33 10 54 3.5E-16 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_28240 4bd4044abcaaef3050f23ba79a6750f6 55 Gene3D G3DSA:2.20.28.120 1 55 5.5E-24 T 14-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_28240 4bd4044abcaaef3050f23ba79a6750f6 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 23 42 - T 14-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_14570 ed29a6b652767ba59f12e8c8b9e46ad4 163 Pfam PF16242 Pyridoxamine 5'-phosphate oxidase like 5 154 9.8E-57 T 14-10-2018 IPR038725 General stress protein, FMN-binding split barrel domain AMIS_14570 ed29a6b652767ba59f12e8c8b9e46ad4 163 SUPERFAMILY SSF50475 7 132 2.39E-35 T 14-10-2018 AMIS_14570 ed29a6b652767ba59f12e8c8b9e46ad4 163 Gene3D G3DSA:2.30.110.10 2 163 4.4E-54 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AMIS_64700 2e3fcb7b0fba87575b902694a0290b95 250 SUPERFAMILY SSF55811 14 161 2.71E-29 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMIS_64700 2e3fcb7b0fba87575b902694a0290b95 250 Gene3D G3DSA:1.10.10.10 157 235 4.7E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_64700 2e3fcb7b0fba87575b902694a0290b95 250 ProSitePatterns PS00893 Nudix box signature. 55 76 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMIS_64700 2e3fcb7b0fba87575b902694a0290b95 250 Gene3D G3DSA:3.90.79.10 11 152 1.1E-42 T 14-10-2018 AMIS_64700 2e3fcb7b0fba87575b902694a0290b95 250 SUPERFAMILY SSF46785 164 238 3.54E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_64700 2e3fcb7b0fba87575b902694a0290b95 250 Pfam PF00293 NUDIX domain 22 149 1.2E-15 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMIS_71900 22fbc53e60730348b94f89d443206125 93 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 85 2.0E-17 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMIS_71900 22fbc53e60730348b94f89d443206125 93 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 92 11.569 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMIS_71900 22fbc53e60730348b94f89d443206125 93 SUPERFAMILY SSF51344 4 87 1.83E-20 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMIS_71900 22fbc53e60730348b94f89d443206125 93 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 5 85 5.2E-25 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMIS_71900 22fbc53e60730348b94f89d443206125 93 Gene3D G3DSA:2.60.15.10 2 89 2.2E-24 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMIS_71900 22fbc53e60730348b94f89d443206125 93 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 87 8.2E-21 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMIS_47400 79267081f039d48faf8f978f3e51dae8 291 Pfam PF12697 Alpha/beta hydrolase family 45 282 1.4E-9 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_47400 79267081f039d48faf8f978f3e51dae8 291 Gene3D G3DSA:3.40.50.1820 1 289 7.4E-35 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_47400 79267081f039d48faf8f978f3e51dae8 291 SUPERFAMILY SSF53474 2 288 4.1E-24 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_4830 9c1afff6d93b52be09dd6c820c57f92b 299 Gene3D G3DSA:3.90.25.10 171 294 9.6E-55 T 14-10-2018 AMIS_4830 9c1afff6d93b52be09dd6c820c57f92b 299 SUPERFAMILY SSF51735 7 295 3.78E-56 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_4830 9c1afff6d93b52be09dd6c820c57f92b 299 Gene3D G3DSA:3.40.50.720 10 283 9.6E-55 T 14-10-2018 AMIS_4830 9c1afff6d93b52be09dd6c820c57f92b 299 Pfam PF01370 NAD dependent epimerase/dehydratase family 10 228 2.7E-35 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AMIS_8860 b5b69524c68241bbbf740fc5def774c1 226 Pfam PF00005 ABC transporter 19 166 3.0E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_8860 b5b69524c68241bbbf740fc5def774c1 226 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_8860 b5b69524c68241bbbf740fc5def774c1 226 SUPERFAMILY SSF52540 1 220 4.13E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_8860 b5b69524c68241bbbf740fc5def774c1 226 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 215 2.0E-83 T 14-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 AMIS_8860 b5b69524c68241bbbf740fc5def774c1 226 Gene3D G3DSA:3.40.50.300 1 223 2.1E-68 T 14-10-2018 AMIS_8860 b5b69524c68241bbbf740fc5def774c1 226 SMART SM00382 28 215 1.9E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_5790 61b14eb388985f39a7b2f567525ad770 163 Gene3D G3DSA:3.30.70.860 6 163 6.8E-60 T 14-10-2018 IPR035571 UPF0234-like, C-terminal AMIS_5790 61b14eb388985f39a7b2f567525ad770 163 SUPERFAMILY SSF89963 91 163 8.11E-26 T 14-10-2018 IPR036183 YajQ-like superfamily AMIS_5790 61b14eb388985f39a7b2f567525ad770 163 Gene3D G3DSA:3.30.70.990 12 100 6.8E-60 T 14-10-2018 IPR035570 UPF0234, N-terminal AMIS_5790 61b14eb388985f39a7b2f567525ad770 163 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 4 163 25.965 T 14-10-2018 IPR007551 Protein of unknown function DUF520 AMIS_5790 61b14eb388985f39a7b2f567525ad770 163 SUPERFAMILY SSF89963 5 88 2.25E-25 T 14-10-2018 IPR036183 YajQ-like superfamily AMIS_5790 61b14eb388985f39a7b2f567525ad770 163 Pfam PF04461 Protein of unknown function (DUF520) 5 163 5.1E-61 T 14-10-2018 IPR007551 Protein of unknown function DUF520 AMIS_48310 c08b505b4a7221fa7d82d624b6378e00 1051 Pfam PF00271 Helicase conserved C-terminal domain 879 988 7.1E-13 T 14-10-2018 IPR001650 Helicase, C-terminal AMIS_48310 c08b505b4a7221fa7d82d624b6378e00 1051 Pfam PF00176 SNF2 family N-terminal domain 603 861 5.9E-59 T 14-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 AMIS_48310 c08b505b4a7221fa7d82d624b6378e00 1051 Gene3D G3DSA:1.20.120.850 815 1038 5.7E-77 T 14-10-2018 AMIS_48310 c08b505b4a7221fa7d82d624b6378e00 1051 SMART SM00487 581 769 3.6E-33 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMIS_48310 c08b505b4a7221fa7d82d624b6378e00 1051 SUPERFAMILY SSF52540 696 1044 5.48E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_48310 c08b505b4a7221fa7d82d624b6378e00 1051 Pfam PF12419 SNF2 Helicase protein 406 538 1.3E-37 T 14-10-2018 IPR022138 Helicase SWF/SNF-related AMIS_48310 c08b505b4a7221fa7d82d624b6378e00 1051 Gene3D G3DSA:3.40.50.10810 586 792 6.8E-67 T 14-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily AMIS_48310 c08b505b4a7221fa7d82d624b6378e00 1051 Gene3D G3DSA:3.40.50.300 800 1002 5.7E-77 T 14-10-2018 AMIS_48310 c08b505b4a7221fa7d82d624b6378e00 1051 SUPERFAMILY SSF52540 572 791 2.03E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_48310 c08b505b4a7221fa7d82d624b6378e00 1051 SMART SM00490 904 988 3.0E-19 T 14-10-2018 IPR001650 Helicase, C-terminal AMIS_55090 73bcf0560ff6bb8570a5f4687d806cbd 90 SUPERFAMILY SSF51182 19 86 4.45E-12 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily AMIS_55090 73bcf0560ff6bb8570a5f4687d806cbd 90 Pfam PF07883 Cupin domain 19 79 1.6E-11 T 14-10-2018 IPR013096 Cupin 2, conserved barrel AMIS_55090 73bcf0560ff6bb8570a5f4687d806cbd 90 Gene3D G3DSA:2.60.120.10 4 88 1.1E-12 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMIS_59520 f44c56a101e18e8a3320370d758f9fe3 520 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 329 488 1.3E-28 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_59520 f44c56a101e18e8a3320370d758f9fe3 520 Pfam PF00672 HAMP domain 206 253 7.9E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_59520 f44c56a101e18e8a3320370d758f9fe3 520 Gene3D G3DSA:1.10.287.950 204 520 7.0E-62 T 14-10-2018 AMIS_59520 f44c56a101e18e8a3320370d758f9fe3 520 SMART SM00283 265 519 3.9E-52 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_59520 f44c56a101e18e8a3320370d758f9fe3 520 SMART SM00304 205 257 8.5E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_59520 f44c56a101e18e8a3320370d758f9fe3 520 SMART SM00304 264 331 110.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_59520 f44c56a101e18e8a3320370d758f9fe3 520 SUPERFAMILY SSF58104 225 518 2.75E-60 T 14-10-2018 AMIS_59520 f44c56a101e18e8a3320370d758f9fe3 520 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 282 311 1.6E-16 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_59520 f44c56a101e18e8a3320370d758f9fe3 520 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 363 390 1.6E-16 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_59520 f44c56a101e18e8a3320370d758f9fe3 520 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 392 421 1.6E-16 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_19240 cbb31a6de2b5f936f244075034fa82a5 342 Gene3D G3DSA:1.10.540.10 3 118 5.4E-15 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMIS_19240 cbb31a6de2b5f936f244075034fa82a5 342 SUPERFAMILY SSF56645 3 122 3.66E-11 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMIS_19240 cbb31a6de2b5f936f244075034fa82a5 342 SUPERFAMILY SSF47203 182 339 1.94E-36 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMIS_19240 cbb31a6de2b5f936f244075034fa82a5 342 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 181 337 2.0E-29 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMIS_19240 cbb31a6de2b5f936f244075034fa82a5 342 Gene3D G3DSA:1.20.140.10 177 342 7.0E-38 T 14-10-2018 AMIS_19240 cbb31a6de2b5f936f244075034fa82a5 342 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 43 116 5.1E-9 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMIS_61220 486b5496dd1aeab5ca35279214939ea2 349 SUPERFAMILY SSF52768 6 320 7.92E-86 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily AMIS_61220 486b5496dd1aeab5ca35279214939ea2 349 Gene3D G3DSA:3.40.800.10 4 323 5.0E-89 T 14-10-2018 AMIS_61220 486b5496dd1aeab5ca35279214939ea2 349 TIGRFAM TIGR01230 agmatinase: agmatinase 27 312 5.9E-55 T 14-10-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 AMIS_61220 486b5496dd1aeab5ca35279214939ea2 349 ProSitePatterns PS01053 Arginase family signature. 242 263 - T 14-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 AMIS_61220 486b5496dd1aeab5ca35279214939ea2 349 PRINTS PR00116 Arginase signature 239 268 7.6E-13 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 AMIS_61220 486b5496dd1aeab5ca35279214939ea2 349 PRINTS PR00116 Arginase signature 122 137 7.6E-13 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 AMIS_61220 486b5496dd1aeab5ca35279214939ea2 349 PIRSF PIRSF036979 14 319 7.3E-78 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 AMIS_61220 486b5496dd1aeab5ca35279214939ea2 349 Pfam PF00491 Arginase family 31 311 6.2E-79 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 AMIS_2860 6f2211489045621c76879ed1ba82121a 441 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 156 441 5.7E-110 T 14-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_2860 6f2211489045621c76879ed1ba82121a 441 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 38 441 7.0E-166 T 14-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_2860 6f2211489045621c76879ed1ba82121a 441 SUPERFAMILY SSF56762 49 441 2.22E-120 T 14-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_2860 6f2211489045621c76879ed1ba82121a 441 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 32 441 46.799 T 14-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_2860 6f2211489045621c76879ed1ba82121a 441 Gene3D G3DSA:1.10.645.20 38 441 7.3E-164 T 14-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_2860 6f2211489045621c76879ed1ba82121a 441 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 76 87 - T 14-10-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_51420 85debb64638c534d0b48904f0ffd972d 165 SUPERFAMILY SSF50475 10 158 7.36E-33 T 14-10-2018 AMIS_51420 85debb64638c534d0b48904f0ffd972d 165 Pfam PF01613 Flavin reductase like domain 16 157 2.2E-28 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 AMIS_51420 85debb64638c534d0b48904f0ffd972d 165 SMART SM00903 16 159 1.7E-30 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 AMIS_51420 85debb64638c534d0b48904f0ffd972d 165 Gene3D G3DSA:2.30.110.10 3 163 4.0E-40 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AMIS_350 53f788439cd912187f4b976cce502a7f 278 Pfam PF03793 PASTA domain 193 252 4.5E-13 T 14-10-2018 IPR005543 PASTA domain AMIS_350 53f788439cd912187f4b976cce502a7f 278 SMART SM00740 189 254 2.6E-12 T 14-10-2018 IPR005543 PASTA domain AMIS_350 53f788439cd912187f4b976cce502a7f 278 Gene3D G3DSA:3.30.10.20 190 253 4.2E-15 T 14-10-2018 AMIS_80390 6d03e0dc8b7a4d0e0812713db0d4b3fd 264 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 13 254 4.9E-39 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 AMIS_80390 6d03e0dc8b7a4d0e0812713db0d4b3fd 264 Gene3D G3DSA:3.20.20.190 2 261 5.6E-68 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 AMIS_80390 6d03e0dc8b7a4d0e0812713db0d4b3fd 264 SUPERFAMILY SSF51695 7 259 7.85E-63 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 AMIS_7590 b5f858ce8d643de19dcf66f3a94a0332 168 Pfam PF04417 Protein of unknown function (DUF501) 27 150 2.7E-40 T 14-10-2018 IPR007511 Protein of unknown function DUF501 AMIS_56690 ca665d3dc0ebff5760a70106b8bf511b 465 Gene3D G3DSA:3.40.50.300 187 436 8.9E-69 T 14-10-2018 AMIS_56690 ca665d3dc0ebff5760a70106b8bf511b 465 SUPERFAMILY SSF52540 259 434 5.53E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_56690 ca665d3dc0ebff5760a70106b8bf511b 465 Pfam PF09140 ATPase MipZ 269 375 1.2E-4 T 14-10-2018 IPR015223 ATPase MipZ AMIS_56690 ca665d3dc0ebff5760a70106b8bf511b 465 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 241 431 2.3E-40 T 14-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 AMIS_33830 eb7b6718392801c2cdebf98ac4714e72 222 SMART SM00894 186 222 3.1E-20 T 14-10-2018 IPR008613 Excalibur calcium-binding domain AMIS_33830 eb7b6718392801c2cdebf98ac4714e72 222 PRINTS PR01217 Proline rich extensin signature 127 144 3.7E-13 T 14-10-2018 AMIS_33830 eb7b6718392801c2cdebf98ac4714e72 222 PRINTS PR01217 Proline rich extensin signature 102 118 3.7E-13 T 14-10-2018 AMIS_33830 eb7b6718392801c2cdebf98ac4714e72 222 PRINTS PR01217 Proline rich extensin signature 13 29 3.7E-13 T 14-10-2018 AMIS_33830 eb7b6718392801c2cdebf98ac4714e72 222 PRINTS PR01217 Proline rich extensin signature 153 178 3.7E-13 T 14-10-2018 AMIS_33830 eb7b6718392801c2cdebf98ac4714e72 222 PRINTS PR01217 Proline rich extensin signature 75 96 3.7E-13 T 14-10-2018 AMIS_33830 eb7b6718392801c2cdebf98ac4714e72 222 Pfam PF05901 Excalibur calcium-binding domain 187 222 3.8E-15 T 14-10-2018 IPR008613 Excalibur calcium-binding domain AMIS_11480 0c051bf3c38867f7f44dfa35ee87d7b9 322 Pfam PF00579 tRNA synthetases class I (W and Y) 5 271 3.4E-60 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMIS_11480 0c051bf3c38867f7f44dfa35ee87d7b9 322 Gene3D G3DSA:3.40.50.620 7 319 8.5E-105 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMIS_11480 0c051bf3c38867f7f44dfa35ee87d7b9 322 SUPERFAMILY SSF52374 5 320 6.57E-77 T 14-10-2018 AMIS_11480 0c051bf3c38867f7f44dfa35ee87d7b9 322 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 5 320 1.3E-82 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AMIS_11480 0c051bf3c38867f7f44dfa35ee87d7b9 322 Gene3D G3DSA:1.10.240.10 185 288 8.5E-105 T 14-10-2018 AMIS_11480 0c051bf3c38867f7f44dfa35ee87d7b9 322 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 21 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMIS_11480 0c051bf3c38867f7f44dfa35ee87d7b9 322 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 5.9E-20 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AMIS_11480 0c051bf3c38867f7f44dfa35ee87d7b9 322 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 141 162 5.9E-20 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AMIS_11480 0c051bf3c38867f7f44dfa35ee87d7b9 322 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 5.9E-20 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AMIS_11480 0c051bf3c38867f7f44dfa35ee87d7b9 322 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 194 204 5.9E-20 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AMIS_68760 97982c11c6296bb953a02b062be0e021 519 Gene3D G3DSA:2.30.30.40 189 318 2.6E-29 T 14-10-2018 AMIS_68760 97982c11c6296bb953a02b062be0e021 519 SUPERFAMILY SSF50341 362 498 2.75E-31 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 AMIS_68760 97982c11c6296bb953a02b062be0e021 519 SMART SM00260 183 324 6.7E-29 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMIS_68760 97982c11c6296bb953a02b062be0e021 519 SMART SM00260 357 496 6.6E-27 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMIS_68760 97982c11c6296bb953a02b062be0e021 519 SMART SM00260 14 151 2.3E-27 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMIS_68760 97982c11c6296bb953a02b062be0e021 519 Gene3D G3DSA:2.30.30.40 363 488 1.8E-34 T 14-10-2018 AMIS_68760 97982c11c6296bb953a02b062be0e021 519 SUPERFAMILY SSF50341 183 328 1.19E-29 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 AMIS_68760 97982c11c6296bb953a02b062be0e021 519 Pfam PF01584 CheW-like domain 19 153 1.9E-30 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMIS_68760 97982c11c6296bb953a02b062be0e021 519 Pfam PF01584 CheW-like domain 362 498 4.8E-32 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMIS_68760 97982c11c6296bb953a02b062be0e021 519 Pfam PF01584 CheW-like domain 188 327 2.4E-29 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMIS_68760 97982c11c6296bb953a02b062be0e021 519 Gene3D G3DSA:2.40.50.180 37 102 1.3E-31 T 14-10-2018 AMIS_68760 97982c11c6296bb953a02b062be0e021 519 Gene3D G3DSA:2.40.50.180 206 273 2.6E-29 T 14-10-2018 AMIS_68760 97982c11c6296bb953a02b062be0e021 519 Gene3D G3DSA:2.40.50.180 380 447 1.8E-34 T 14-10-2018 AMIS_68760 97982c11c6296bb953a02b062be0e021 519 Gene3D G3DSA:2.30.30.40 20 145 1.3E-31 T 14-10-2018 AMIS_68760 97982c11c6296bb953a02b062be0e021 519 SUPERFAMILY SSF50341 12 153 2.49E-31 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 AMIS_30650 c59889aebadae3adbb5fb170cccbde7e 432 Gene3D G3DSA:2.60.40.290 340 431 8.4E-21 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 AMIS_30650 c59889aebadae3adbb5fb170cccbde7e 432 SUPERFAMILY SSF53474 28 109 4.15E-12 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_30650 c59889aebadae3adbb5fb170cccbde7e 432 SUPERFAMILY SSF53474 133 343 7.56E-39 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_30650 c59889aebadae3adbb5fb170cccbde7e 432 SMART SM00637 340 429 4.1E-23 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 AMIS_30650 c59889aebadae3adbb5fb170cccbde7e 432 TIGRFAM TIGR01840 esterase_phb: esterase, PHB depolymerase family 51 269 6.8E-39 T 14-10-2018 IPR010126 Esterase, PHB depolymerase GO:0005576|GO:0016787 AMIS_30650 c59889aebadae3adbb5fb170cccbde7e 432 Pfam PF00553 Cellulose binding domain 341 427 4.7E-18 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 AMIS_30650 c59889aebadae3adbb5fb170cccbde7e 432 SUPERFAMILY SSF49384 336 427 9.07E-21 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 AMIS_30650 c59889aebadae3adbb5fb170cccbde7e 432 Gene3D G3DSA:3.40.50.1820 26 339 1.5E-49 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_30650 c59889aebadae3adbb5fb170cccbde7e 432 Pfam PF10503 Esterase PHB depolymerase 52 247 1.0E-19 T 14-10-2018 IPR010126 Esterase, PHB depolymerase GO:0005576|GO:0016787 AMIS_45780 05da2f2521def922484f31503971f850 267 SUPERFAMILY SSF55781 78 255 2.88E-43 T 14-10-2018 AMIS_45780 05da2f2521def922484f31503971f850 267 Gene3D G3DSA:1.10.10.10 8 81 3.1E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_45780 05da2f2521def922484f31503971f850 267 Pfam PF01614 Bacterial transcriptional regulator 129 252 3.3E-23 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal AMIS_45780 05da2f2521def922484f31503971f850 267 Pfam PF09339 IclR helix-turn-helix domain 15 63 6.5E-16 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AMIS_45780 05da2f2521def922484f31503971f850 267 Gene3D G3DSA:3.30.450.40 82 259 1.0E-49 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_45780 05da2f2521def922484f31503971f850 267 SMART SM00419 22 73 0.001 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMIS_45780 05da2f2521def922484f31503971f850 267 SUPERFAMILY SSF46785 13 85 4.97E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_45780 05da2f2521def922484f31503971f850 267 SMART SM00346 13 101 2.1E-26 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AMIS_68170 6827da51bd7ba9bc4f63d0e7990d3df2 340 TIGRFAM TIGR02778 ligD_pol: DNA ligase D, polymerase domain 16 262 6.6E-71 T 14-10-2018 IPR014145 DNA ligase D, polymerase domain AMIS_68170 6827da51bd7ba9bc4f63d0e7990d3df2 340 Gene3D G3DSA:3.90.920.30 23 302 1.9E-93 T 14-10-2018 AMIS_34720 9a3ca1a8b56c4da4e164ac291e51b86c 198 Gene3D G3DSA:1.10.150.240 18 86 9.9E-38 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AMIS_34720 9a3ca1a8b56c4da4e164ac291e51b86c 198 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 105 180 6.2E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMIS_34720 9a3ca1a8b56c4da4e164ac291e51b86c 198 SUPERFAMILY SSF56784 4 189 2.69E-28 T 14-10-2018 IPR036412 HAD-like superfamily AMIS_34720 9a3ca1a8b56c4da4e164ac291e51b86c 198 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 9.8E-12 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMIS_34720 9a3ca1a8b56c4da4e164ac291e51b86c 198 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 143 163 9.8E-12 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMIS_34720 9a3ca1a8b56c4da4e164ac291e51b86c 198 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 125 141 9.8E-12 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMIS_34720 9a3ca1a8b56c4da4e164ac291e51b86c 198 Gene3D G3DSA:3.40.50.1000 4 192 9.9E-38 T 14-10-2018 IPR023214 HAD superfamily AMIS_60040 e81e77868a76b494815c456ce2ffaf75 116 SUPERFAMILY SSF52091 11 113 6.28E-23 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_60040 e81e77868a76b494815c456ce2ffaf75 116 Pfam PF13466 STAS domain 21 97 1.2E-11 T 14-10-2018 IPR002645 STAS domain AMIS_60040 e81e77868a76b494815c456ce2ffaf75 116 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 10 108 5.8E-16 T 14-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 AMIS_60040 e81e77868a76b494815c456ce2ffaf75 116 Gene3D G3DSA:3.30.750.24 6 115 2.0E-26 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_7300 3d9e62b6499f620d640e53cc1e76a3e9 276 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 64 241 2.8E-53 T 14-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 AMIS_7300 3d9e62b6499f620d640e53cc1e76a3e9 276 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 62 241 4.4E-35 T 14-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 AMIS_65210 cf2b0c9ebcf863f86956de8a9951be0f 402 Gene3D G3DSA:3.30.565.10 277 397 7.8E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_65210 cf2b0c9ebcf863f86956de8a9951be0f 402 Pfam PF07730 Histidine kinase 191 254 3.9E-13 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMIS_65210 cf2b0c9ebcf863f86956de8a9951be0f 402 SUPERFAMILY SSF55874 289 397 3.87E-16 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_65210 cf2b0c9ebcf863f86956de8a9951be0f 402 SMART SM00387 307 399 5.2E-5 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_67000 be6fbb27a59f947ad27a7207f7799497 804 Gene3D G3DSA:3.40.50.300 461 660 7.6E-14 T 14-10-2018 AMIS_67000 be6fbb27a59f947ad27a7207f7799497 804 Gene3D G3DSA:3.40.50.300 63 339 3.3E-16 T 14-10-2018 AMIS_67000 be6fbb27a59f947ad27a7207f7799497 804 SUPERFAMILY SSF52540 65 646 1.37E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_67000 be6fbb27a59f947ad27a7207f7799497 804 Pfam PF02463 RecF/RecN/SMC N terminal domain 65 646 2.1E-12 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal AMIS_30820 fb2f086025fa2329b71f342f7d67e5c6 335 Pfam PF12146 Serine aminopeptidase, S33 49 282 1.1E-10 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 AMIS_30820 fb2f086025fa2329b71f342f7d67e5c6 335 SUPERFAMILY SSF53474 21 288 1.05E-33 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_30820 fb2f086025fa2329b71f342f7d67e5c6 335 Gene3D G3DSA:3.40.50.1820 19 298 3.7E-35 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_70330 3cbc51dccadb4d5b921953ad19d4032f 464 Gene3D G3DSA:2.130.10.10 47 318 5.7E-13 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_70330 3cbc51dccadb4d5b921953ad19d4032f 464 Pfam PF13360 PQQ-like domain 117 386 2.0E-13 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat AMIS_70330 3cbc51dccadb4d5b921953ad19d4032f 464 SUPERFAMILY SSF50998 86 363 3.53E-12 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AMIS_56860 19981fb448b9449ecd20186e213532bc 226 Gene3D G3DSA:3.40.50.300 1 220 3.6E-52 T 14-10-2018 AMIS_56860 19981fb448b9449ecd20186e213532bc 226 SUPERFAMILY SSF52540 4 219 2.0E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_56860 19981fb448b9449ecd20186e213532bc 226 SMART SM00382 29 182 2.3E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_56860 19981fb448b9449ecd20186e213532bc 226 Pfam PF00005 ABC transporter 20 146 3.1E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_56860 19981fb448b9449ecd20186e213532bc 226 ProSitePatterns PS00211 ABC transporters family signature. 121 135 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_26260 35b23e2eca547c612c5b6dbf3194de29 131 Gene3D G3DSA:1.10.10.10 5 128 2.5E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_26260 35b23e2eca547c612c5b6dbf3194de29 131 Pfam PF01638 HxlR-like helix-turn-helix 30 117 6.6E-29 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type AMIS_26260 35b23e2eca547c612c5b6dbf3194de29 131 SUPERFAMILY SSF46785 24 125 1.13E-30 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_49700 c66de2f3feb66f6b6ca1346d208f7a43 344 Gene3D G3DSA:3.30.1780.10 24 332 4.0E-87 T 14-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 AMIS_49700 c66de2f3feb66f6b6ca1346d208f7a43 344 TIGRFAM TIGR03944 dehyd_SbnB_fam: 2,3-diaminopropionate biosynthesis protein SbnB 13 338 1.2E-122 T 14-10-2018 IPR023866 2,3-diaminopropionate biosynthesis protein SbnB AMIS_49700 c66de2f3feb66f6b6ca1346d208f7a43 344 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 29 328 5.8E-38 T 14-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 AMIS_49700 c66de2f3feb66f6b6ca1346d208f7a43 344 SUPERFAMILY SSF51735 13 334 2.5E-60 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_49700 c66de2f3feb66f6b6ca1346d208f7a43 344 Gene3D G3DSA:3.40.50.720 143 311 4.0E-87 T 14-10-2018 AMIS_49700 c66de2f3feb66f6b6ca1346d208f7a43 344 PIRSF PIRSF001439 7 338 9.5E-64 T 14-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 AMIS_400 65c37f82578463594368c71d7a52d482 272 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 63 240 6.2E-42 T 14-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 AMIS_400 65c37f82578463594368c71d7a52d482 272 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 67 236 8.6E-51 T 14-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 AMIS_76190 44b2b28b2de3eda99f29ae4cc03c826f 411 PRINTS PR00207 Flagellin signature 111 134 2.1E-22 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AMIS_76190 44b2b28b2de3eda99f29ae4cc03c826f 411 PRINTS PR00207 Flagellin signature 76 95 2.1E-22 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AMIS_76190 44b2b28b2de3eda99f29ae4cc03c826f 411 PRINTS PR00207 Flagellin signature 37 54 2.1E-22 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AMIS_76190 44b2b28b2de3eda99f29ae4cc03c826f 411 Gene3D G3DSA:1.10.8.410 361 411 4.0E-27 T 14-10-2018 AMIS_76190 44b2b28b2de3eda99f29ae4cc03c826f 411 Gene3D G3DSA:1.20.1330.10 44 360 1.2E-66 T 14-10-2018 AMIS_76190 44b2b28b2de3eda99f29ae4cc03c826f 411 Pfam PF00700 Bacterial flagellin C-terminal helical region 326 410 1.6E-29 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AMIS_76190 44b2b28b2de3eda99f29ae4cc03c826f 411 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 4.0E-41 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AMIS_76190 44b2b28b2de3eda99f29ae4cc03c826f 411 SUPERFAMILY SSF64518 1 411 9.15E-91 T 14-10-2018 AMIS_76190 44b2b28b2de3eda99f29ae4cc03c826f 411 Gene3D G3DSA:3.30.70.2120 182 297 1.2E-66 T 14-10-2018 AMIS_37600 8ba85b489a57993b60dad50c32c58472 483 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 255 262 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AMIS_37600 8ba85b489a57993b60dad50c32c58472 483 Gene3D G3DSA:3.40.605.10 31 472 1.9E-163 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AMIS_37600 8ba85b489a57993b60dad50c32c58472 483 SUPERFAMILY SSF53720 10 479 1.57E-153 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMIS_37600 8ba85b489a57993b60dad50c32c58472 483 Gene3D G3DSA:3.40.309.10 259 447 1.9E-163 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AMIS_37600 8ba85b489a57993b60dad50c32c58472 483 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 283 294 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AMIS_37600 8ba85b489a57993b60dad50c32c58472 483 Pfam PF00171 Aldehyde dehydrogenase family 29 478 2.3E-156 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AMIS_73610 73c1b4ea1a9c4fff7d9ed75500382cfc 332 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 4.5E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_73610 73c1b4ea1a9c4fff7d9ed75500382cfc 332 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 4.5E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_73610 73c1b4ea1a9c4fff7d9ed75500382cfc 332 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 4.5E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_73610 73c1b4ea1a9c4fff7d9ed75500382cfc 332 Pfam PF00106 short chain dehydrogenase 6 189 1.4E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_73610 73c1b4ea1a9c4fff7d9ed75500382cfc 332 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 9.7E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_73610 73c1b4ea1a9c4fff7d9ed75500382cfc 332 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 9.7E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_73610 73c1b4ea1a9c4fff7d9ed75500382cfc 332 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 9.7E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_73610 73c1b4ea1a9c4fff7d9ed75500382cfc 332 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 9.7E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_73610 73c1b4ea1a9c4fff7d9ed75500382cfc 332 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 9.7E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_73610 73c1b4ea1a9c4fff7d9ed75500382cfc 332 SUPERFAMILY SSF51735 4 262 5.96E-60 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_73610 73c1b4ea1a9c4fff7d9ed75500382cfc 332 Gene3D G3DSA:3.40.50.720 2 267 1.7E-57 T 14-10-2018 AMIS_73610 73c1b4ea1a9c4fff7d9ed75500382cfc 332 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMIS_63780 fbfd998018304501b607bca99707c5f0 448 SUPERFAMILY SSF51338 331 446 7.1E-25 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMIS_63780 fbfd998018304501b607bca99707c5f0 448 SUPERFAMILY SSF51556 57 371 5.68E-94 T 14-10-2018 IPR032466 Metal-dependent hydrolase AMIS_63780 fbfd998018304501b607bca99707c5f0 448 Gene3D G3DSA:3.20.20.140 58 371 6.1E-122 T 14-10-2018 AMIS_63780 fbfd998018304501b607bca99707c5f0 448 Pfam PF01979 Amidohydrolase family 55 414 2.7E-57 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AMIS_63780 fbfd998018304501b607bca99707c5f0 448 SUPERFAMILY SSF51338 2 67 1.71E-11 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMIS_63780 fbfd998018304501b607bca99707c5f0 448 Gene3D G3DSA:2.30.40.10 11 419 6.1E-122 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMIS_23030 f32affa0dff6820f2f9809744b4940ad 355 Gene3D G3DSA:3.40.50.720 169 301 8.3E-121 T 14-10-2018 AMIS_23030 f32affa0dff6820f2f9809744b4940ad 355 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 149 3.6E-24 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMIS_23030 f32affa0dff6820f2f9809744b4940ad 355 SUPERFAMILY SSF51735 155 318 1.43E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_23030 f32affa0dff6820f2f9809744b4940ad 355 Pfam PF00107 Zinc-binding dehydrogenase 192 315 3.0E-28 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMIS_23030 f32affa0dff6820f2f9809744b4940ad 355 SUPERFAMILY SSF50129 1 188 2.59E-52 T 14-10-2018 IPR011032 GroES-like superfamily AMIS_23030 f32affa0dff6820f2f9809744b4940ad 355 Gene3D G3DSA:3.90.180.10 8 348 8.3E-121 T 14-10-2018 AMIS_23030 f32affa0dff6820f2f9809744b4940ad 355 SMART SM00829 12 351 3.3E-4 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMIS_23030 f32affa0dff6820f2f9809744b4940ad 355 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 60 74 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AMIS_61650 5913d2ed7ff3f1f5d911d46882fc11bf 430 TIGRFAM TIGR03440 egtB_TIGR03440: ergothioneine biosynthesis protein EgtB 10 427 1.3E-132 T 14-10-2018 IPR017806 Ergothioneine biosynthesis protein EgtB GO:0052699 KEGG: 00340+1.14.99.50|MetaCyc: PWY-7255 AMIS_61650 5913d2ed7ff3f1f5d911d46882fc11bf 430 SUPERFAMILY SSF109854 4 140 3.43E-20 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes AMIS_61650 5913d2ed7ff3f1f5d911d46882fc11bf 430 Hamap MF_02035 Hercynine oxygenase [egtB]. 1 430 52.145 T 14-10-2018 IPR032890 Hercynine oxygenase, Actinobacteria GO:0016491|GO:0052699 KEGG: 00340+1.14.99.50|MetaCyc: PWY-7255 AMIS_61650 5913d2ed7ff3f1f5d911d46882fc11bf 430 Gene3D G3DSA:1.20.120.450 2 149 4.6E-9 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes AMIS_61650 5913d2ed7ff3f1f5d911d46882fc11bf 430 Gene3D G3DSA:3.90.1580.10 158 430 2.4E-61 T 14-10-2018 AMIS_61650 5913d2ed7ff3f1f5d911d46882fc11bf 430 Pfam PF12867 DinB superfamily 12 144 2.6E-26 T 14-10-2018 IPR024775 DinB-like domain AMIS_61650 5913d2ed7ff3f1f5d911d46882fc11bf 430 SUPERFAMILY SSF56436 171 429 8.67E-76 T 14-10-2018 IPR016187 C-type lectin fold AMIS_61650 5913d2ed7ff3f1f5d911d46882fc11bf 430 Pfam PF03781 Sulfatase-modifying factor enzyme 1 170 428 1.5E-63 T 14-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 AMIS_18850 12a79c550ef3b48f3c5067429fe08d06 574 SMART SM00327 369 556 2.8E-9 T 14-10-2018 IPR002035 von Willebrand factor, type A AMIS_18850 12a79c550ef3b48f3c5067429fe08d06 574 Gene3D G3DSA:3.40.50.410 371 563 1.8E-26 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMIS_18850 12a79c550ef3b48f3c5067429fe08d06 574 Pfam PF13531 Bacterial extracellular solute-binding protein 50 324 1.8E-23 T 14-10-2018 AMIS_18850 12a79c550ef3b48f3c5067429fe08d06 574 SUPERFAMILY SSF53300 372 559 8.75E-18 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMIS_18850 12a79c550ef3b48f3c5067429fe08d06 574 SUPERFAMILY SSF53850 48 348 7.38E-8 T 14-10-2018 AMIS_18850 12a79c550ef3b48f3c5067429fe08d06 574 Pfam PF00092 von Willebrand factor type A domain 374 549 2.5E-6 T 14-10-2018 IPR002035 von Willebrand factor, type A AMIS_70470 f2e7d8a56e058c37a45a968eb1e3c947 353 SUPERFAMILY SSF53335 165 325 1.38E-14 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_70470 f2e7d8a56e058c37a45a968eb1e3c947 353 Gene3D G3DSA:3.40.50.150 152 331 3.3E-26 T 14-10-2018 AMIS_70470 f2e7d8a56e058c37a45a968eb1e3c947 353 Pfam PF13578 Methyltransferase domain 190 308 9.5E-18 T 14-10-2018 AMIS_56590 44512ed380d2d08d4b12d6761e954f17 258 Gene3D G3DSA:3.40.50.300 3 257 1.8E-77 T 14-10-2018 AMIS_56590 44512ed380d2d08d4b12d6761e954f17 258 SUPERFAMILY SSF52540 3 247 4.22E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_56590 44512ed380d2d08d4b12d6761e954f17 258 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_56590 44512ed380d2d08d4b12d6761e954f17 258 SMART SM00382 30 226 4.4E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_56590 44512ed380d2d08d4b12d6761e954f17 258 Pfam PF00005 ABC transporter 22 168 3.8E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_24130 d6206dfede342dc46f036b4ca8399159 509 Gene3D G3DSA:3.40.605.10 34 485 5.6E-146 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AMIS_24130 d6206dfede342dc46f036b4ca8399159 509 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AMIS_24130 d6206dfede342dc46f036b4ca8399159 509 SUPERFAMILY SSF53720 25 495 1.15E-135 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMIS_24130 d6206dfede342dc46f036b4ca8399159 509 Gene3D G3DSA:3.40.309.10 265 460 5.6E-146 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AMIS_24130 d6206dfede342dc46f036b4ca8399159 509 Pfam PF00171 Aldehyde dehydrogenase family 32 488 1.6E-129 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AMIS_78890 4a1a39ad928ef1c7cf5b9f73dea3f8c8 296 Pfam PF13560 Helix-turn-helix domain 21 83 6.4E-13 T 14-10-2018 AMIS_78890 4a1a39ad928ef1c7cf5b9f73dea3f8c8 296 SUPERFAMILY SSF47413 17 74 1.78E-5 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_78890 4a1a39ad928ef1c7cf5b9f73dea3f8c8 296 Gene3D G3DSA:1.10.260.40 17 79 1.9E-5 T 14-10-2018 AMIS_48180 39dbe7203f28670039cd4cece9f93d17 447 Gene3D G3DSA:1.20.1250.20 10 389 1.6E-27 T 14-10-2018 AMIS_48180 39dbe7203f28670039cd4cece9f93d17 447 SUPERFAMILY SSF103473 15 430 1.27E-25 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_48180 39dbe7203f28670039cd4cece9f93d17 447 Pfam PF07690 Major Facilitator Superfamily 18 366 7.3E-20 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_13940 c682f75956535716a042311c20de621f 566 Pfam PF02277 Phosphoribosyltransferase 238 545 5.1E-46 T 14-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 AMIS_13940 c682f75956535716a042311c20de621f 566 SUPERFAMILY SSF52540 9 179 1.06E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_13940 c682f75956535716a042311c20de621f 566 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 9 176 4.6E-46 T 14-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 AMIS_13940 c682f75956535716a042311c20de621f 566 Gene3D G3DSA:3.40.50.10210 284 538 1.7E-40 T 14-10-2018 AMIS_13940 c682f75956535716a042311c20de621f 566 Gene3D G3DSA:3.40.50.300 8 179 1.6E-44 T 14-10-2018 AMIS_13940 c682f75956535716a042311c20de621f 566 SUPERFAMILY SSF52733 236 543 5.89E-34 T 14-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 AMIS_36790 2a5ea83af86e11fd69f944cf6f23b75f 377 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 3.3E-21 T 14-10-2018 AMIS_36790 2a5ea83af86e11fd69f944cf6f23b75f 377 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 283 298 3.3E-21 T 14-10-2018 AMIS_36790 2a5ea83af86e11fd69f944cf6f23b75f 377 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 298 314 3.3E-21 T 14-10-2018 AMIS_36790 2a5ea83af86e11fd69f944cf6f23b75f 377 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 3.3E-21 T 14-10-2018 AMIS_36790 2a5ea83af86e11fd69f944cf6f23b75f 377 Pfam PF01494 FAD binding domain 6 346 1.4E-38 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 AMIS_36790 2a5ea83af86e11fd69f944cf6f23b75f 377 SUPERFAMILY SSF51905 6 357 1.15E-56 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_36790 2a5ea83af86e11fd69f944cf6f23b75f 377 Gene3D G3DSA:3.50.50.60 5 363 2.5E-64 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_19390 c60885c7297b415a927ddfd45db0fc4f 532 Pfam PF00732 GMC oxidoreductase 113 318 6.5E-5 T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AMIS_19390 c60885c7297b415a927ddfd45db0fc4f 532 Pfam PF13450 NAD(P)-binding Rossmann-like domain 38 67 4.6E-6 T 14-10-2018 AMIS_19390 c60885c7297b415a927ddfd45db0fc4f 532 SUPERFAMILY SSF54373 322 475 3.14E-7 T 14-10-2018 AMIS_19390 c60885c7297b415a927ddfd45db0fc4f 532 Gene3D G3DSA:3.50.50.60 36 528 4.2E-155 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_19390 c60885c7297b415a927ddfd45db0fc4f 532 Pfam PF05199 GMC oxidoreductase 469 523 9.1E-9 T 14-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 AMIS_19390 c60885c7297b415a927ddfd45db0fc4f 532 SUPERFAMILY SSF51905 37 529 6.66E-33 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_19390 c60885c7297b415a927ddfd45db0fc4f 532 Gene3D G3DSA:3.30.410.10 172 467 4.2E-155 T 14-10-2018 AMIS_5500 8b1fe42929d40269fcdfebdc675f7ad9 287 SUPERFAMILY SSF53335 6 252 9.14E-55 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_5500 8b1fe42929d40269fcdfebdc675f7ad9 287 TIGRFAM TIGR00027 mthyl_TIGR00027: methyltransferase, TIGR00027 family 8 246 4.6E-48 T 14-10-2018 IPR011610 S-adenosyl-L-methionine-dependent methyltransferase, putative GO:0008168 AMIS_5500 8b1fe42929d40269fcdfebdc675f7ad9 287 Pfam PF04072 Leucine carboxyl methyltransferase 12 171 2.1E-35 T 14-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 AMIS_5500 8b1fe42929d40269fcdfebdc675f7ad9 287 Gene3D G3DSA:3.40.50.150 3 256 2.5E-51 T 14-10-2018 AMIS_24330 acc9a707820ea7b891e74343f4812d9a 275 Gene3D G3DSA:3.90.25.10 150 264 1.0E-83 T 14-10-2018 AMIS_24330 acc9a707820ea7b891e74343f4812d9a 275 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 3 271 1.5E-78 T 14-10-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 AMIS_24330 acc9a707820ea7b891e74343f4812d9a 275 Pfam PF04321 RmlD substrate binding domain 1 273 4.1E-87 T 14-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 AMIS_24330 acc9a707820ea7b891e74343f4812d9a 275 SUPERFAMILY SSF51735 1 270 4.76E-78 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_24330 acc9a707820ea7b891e74343f4812d9a 275 Gene3D G3DSA:3.40.50.720 4 260 1.0E-83 T 14-10-2018 AMIS_40850 5455ac87d6f2984f11e0d018e8195e6a 322 Pfam PF03466 LysR substrate binding domain 180 317 1.5E-8 T 14-10-2018 IPR005119 LysR, substrate-binding AMIS_40850 5455ac87d6f2984f11e0d018e8195e6a 322 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.5E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_40850 5455ac87d6f2984f11e0d018e8195e6a 322 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.5E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_40850 5455ac87d6f2984f11e0d018e8195e6a 322 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.5E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_40850 5455ac87d6f2984f11e0d018e8195e6a 322 Gene3D G3DSA:3.40.190.10 181 313 9.5E-9 T 14-10-2018 AMIS_40850 5455ac87d6f2984f11e0d018e8195e6a 322 Gene3D G3DSA:3.40.190.10 196 294 9.5E-9 T 14-10-2018 AMIS_40850 5455ac87d6f2984f11e0d018e8195e6a 322 Gene3D G3DSA:1.10.10.10 3 92 4.7E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_40850 5455ac87d6f2984f11e0d018e8195e6a 322 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 2.2E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_40850 5455ac87d6f2984f11e0d018e8195e6a 322 SUPERFAMILY SSF46785 4 88 4.81E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_40850 5455ac87d6f2984f11e0d018e8195e6a 322 SUPERFAMILY SSF53850 180 305 2.71E-8 T 14-10-2018 AMIS_47300 9d8aa916f4e6e8e5809bb9413137d4c4 267 Pfam PF09557 Domain of unknown function (DUF2382) 144 255 1.1E-30 T 14-10-2018 IPR019060 Domain of unknown function DUF2382 AMIS_47300 9d8aa916f4e6e8e5809bb9413137d4c4 267 Gene3D G3DSA:3.90.50.10 2 107 2.9E-5 T 14-10-2018 IPR014747 Bacterial photosynthetic reaction centre, H-chain, C-terminal GO:0019684|GO:0030077|GO:0045156 AMIS_47300 9d8aa916f4e6e8e5809bb9413137d4c4 267 SUPERFAMILY SSF50346 7 105 4.87E-16 T 14-10-2018 IPR011033 PRC-barrel-like superfamily AMIS_47300 9d8aa916f4e6e8e5809bb9413137d4c4 267 Pfam PF05239 PRC-barrel domain 6 73 2.4E-10 T 14-10-2018 IPR027275 PRC-barrel domain AMIS_22510 5eb1a2731a552a4088fd553d3316111c 121 Pfam PF09969 Uncharacterized conserved protein (DUF2203) 3 119 5.6E-34 T 14-10-2018 IPR018699 Protein of unknown function DUF2203 AMIS_22510 5eb1a2731a552a4088fd553d3316111c 121 PIRSF PIRSF016498 1 121 2.9E-22 T 14-10-2018 IPR018699 Protein of unknown function DUF2203 AMIS_48420 0efea3f3d1f28d02ad800a1a2a8b83eb 311 SUPERFAMILY SSF52540 2 301 1.4E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_48420 0efea3f3d1f28d02ad800a1a2a8b83eb 311 Gene3D G3DSA:3.40.50.300 1 237 7.1E-69 T 14-10-2018 AMIS_48420 0efea3f3d1f28d02ad800a1a2a8b83eb 311 Pfam PF00685 Sulfotransferase domain 4 210 7.0E-19 T 14-10-2018 IPR000863 Sulfotransferase domain GO:0008146 AMIS_39260 2ddb7025158ce551c0596b62abb87f1d 595 Pfam PF00149 Calcineurin-like phosphoesterase 38 223 1.3E-7 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AMIS_39260 2ddb7025158ce551c0596b62abb87f1d 595 Gene3D G3DSA:2.60.120.200 342 589 2.2E-17 T 14-10-2018 AMIS_39260 2ddb7025158ce551c0596b62abb87f1d 595 Gene3D G3DSA:3.60.21.10 21 288 2.7E-10 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like AMIS_39260 2ddb7025158ce551c0596b62abb87f1d 595 SUPERFAMILY SSF49899 343 587 5.31E-23 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily AMIS_39260 2ddb7025158ce551c0596b62abb87f1d 595 SUPERFAMILY SSF56300 36 262 1.84E-21 T 14-10-2018 AMIS_39260 2ddb7025158ce551c0596b62abb87f1d 595 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 433 587 1.2E-11 T 14-10-2018 AMIS_38730 68e5605f213bb865998114887745ab61 551 Gene3D G3DSA:3.40.640.10 46 268 6.6E-41 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_38730 68e5605f213bb865998114887745ab61 551 Pfam PF00266 Aminotransferase class-V 29 396 1.6E-36 T 14-10-2018 IPR000192 Aminotransferase class V domain AMIS_38730 68e5605f213bb865998114887745ab61 551 SUPERFAMILY SSF53383 19 445 5.7E-68 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_38730 68e5605f213bb865998114887745ab61 551 Gene3D G3DSA:3.90.1150.10 288 450 1.9E-24 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMIS_72310 0c88978cf165aaece19efafc0396f387 619 Pfam PF13432 Tetratricopeptide repeat 243 306 5.7E-7 T 14-10-2018 AMIS_72310 0c88978cf165aaece19efafc0396f387 619 SUPERFAMILY SSF48452 245 338 8.28E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_72310 0c88978cf165aaece19efafc0396f387 619 Gene3D G3DSA:3.90.550.20 389 503 1.8E-5 T 14-10-2018 AMIS_72310 0c88978cf165aaece19efafc0396f387 619 Pfam PF05704 Capsular polysaccharide synthesis protein 387 612 1.8E-51 T 14-10-2018 IPR008441 Capsular polysaccharide synthesis protein AMIS_72310 0c88978cf165aaece19efafc0396f387 619 Gene3D G3DSA:2.60.120.260 3 177 9.2E-7 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_72310 0c88978cf165aaece19efafc0396f387 619 SUPERFAMILY SSF53448 387 548 2.25E-14 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_72310 0c88978cf165aaece19efafc0396f387 619 Gene3D G3DSA:1.25.40.10 215 366 1.2E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_6810 76e6db843b16c062802c5b7caaf7fbb5 267 SUPERFAMILY SSF52540 5 233 8.1E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_6810 76e6db843b16c062802c5b7caaf7fbb5 267 Pfam PF00005 ABC transporter 22 173 8.0E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_6810 76e6db843b16c062802c5b7caaf7fbb5 267 SMART SM00382 31 221 2.8E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_6810 76e6db843b16c062802c5b7caaf7fbb5 267 Gene3D G3DSA:3.40.50.300 1 241 9.5E-58 T 14-10-2018 AMIS_21640 a6d1ad258a4530c5d496cc8bb8d9aff5 195 Gene3D G3DSA:1.20.140.10 59 194 5.4E-34 T 14-10-2018 AMIS_21640 a6d1ad258a4530c5d496cc8bb8d9aff5 195 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 62 181 9.2E-27 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMIS_21640 a6d1ad258a4530c5d496cc8bb8d9aff5 195 SUPERFAMILY SSF47203 61 193 3.06E-33 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMIS_51130 9780ee398fa363b5f6b775acec0d2fbf 320 SUPERFAMILY SSF161098 11 313 9.81E-54 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_51130 9780ee398fa363b5f6b775acec0d2fbf 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 316 1.8E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_26470 7e82463ac219f4714198197e6b078cc4 2039 Gene3D G3DSA:2.170.16.10 1754 1898 1.4E-41 T 14-10-2018 AMIS_26470 7e82463ac219f4714198197e6b078cc4 2039 Pfam PF07591 Pretoxin HINT domain 1766 1899 1.4E-20 T 14-10-2018 AMIS_26470 7e82463ac219f4714198197e6b078cc4 2039 Gene3D G3DSA:3.90.930.1 498 628 1.9E-8 T 14-10-2018 AMIS_26470 7e82463ac219f4714198197e6b078cc4 2039 Gene3D G3DSA:3.90.930.1 371 497 6.1E-8 T 14-10-2018 AMIS_26470 7e82463ac219f4714198197e6b078cc4 2039 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1149 1178 8.9E-4 T 14-10-2018 IPR006530 YD repeat AMIS_26470 7e82463ac219f4714198197e6b078cc4 2039 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 578 619 2.2E-8 T 14-10-2018 IPR006530 YD repeat AMIS_26470 7e82463ac219f4714198197e6b078cc4 2039 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 842 881 3.9E-6 T 14-10-2018 IPR006530 YD repeat AMIS_26470 7e82463ac219f4714198197e6b078cc4 2039 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 411 442 2.0E-5 T 14-10-2018 IPR006530 YD repeat AMIS_26470 7e82463ac219f4714198197e6b078cc4 2039 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 557 585 1.9E-4 T 14-10-2018 IPR006530 YD repeat AMIS_26470 7e82463ac219f4714198197e6b078cc4 2039 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1026 1060 4.3E-4 T 14-10-2018 IPR006530 YD repeat AMIS_26470 7e82463ac219f4714198197e6b078cc4 2039 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 954 989 9.5E-4 T 14-10-2018 IPR006530 YD repeat AMIS_26470 7e82463ac219f4714198197e6b078cc4 2039 Pfam PF05593 RHS Repeat 1170 1203 7.9E-5 T 14-10-2018 IPR031325 RHS repeat AMIS_26470 7e82463ac219f4714198197e6b078cc4 2039 Pfam PF05593 RHS Repeat 844 876 1.4E-6 T 14-10-2018 IPR031325 RHS repeat AMIS_26470 7e82463ac219f4714198197e6b078cc4 2039 Pfam PF05593 RHS Repeat 1149 1179 3.0E-5 T 14-10-2018 IPR031325 RHS repeat AMIS_26470 7e82463ac219f4714198197e6b078cc4 2039 Pfam PF05593 RHS Repeat 412 443 5.8E-7 T 14-10-2018 IPR031325 RHS repeat AMIS_26470 7e82463ac219f4714198197e6b078cc4 2039 Pfam PF05593 RHS Repeat 1026 1058 3.6E-5 T 14-10-2018 IPR031325 RHS repeat AMIS_26470 7e82463ac219f4714198197e6b078cc4 2039 Pfam PF05593 RHS Repeat 578 613 4.8E-5 T 14-10-2018 IPR031325 RHS repeat AMIS_26470 7e82463ac219f4714198197e6b078cc4 2039 Pfam PF05593 RHS Repeat 629 662 1.6E-4 T 14-10-2018 IPR031325 RHS repeat AMIS_26470 7e82463ac219f4714198197e6b078cc4 2039 TIGRFAM TIGR01443 intein_Cterm: intein C-terminal splicing region 1874 1898 0.0031 T 14-10-2018 IPR030934 Intein C-terminal splicing region AMIS_26470 7e82463ac219f4714198197e6b078cc4 2039 SMART SM00306 1754 1856 1.2E-9 T 14-10-2018 IPR003587 Hint domain N-terminal Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AMIS_26470 7e82463ac219f4714198197e6b078cc4 2039 SUPERFAMILY SSF51294 1756 1899 1.96E-22 T 14-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AMIS_26470 7e82463ac219f4714198197e6b078cc4 2039 Gene3D G3DSA:2.180.10.10 1030 1569 3.8E-36 T 14-10-2018 AMIS_26470 7e82463ac219f4714198197e6b078cc4 2039 Gene3D G3DSA:2.180.10.10 821 950 1.4E-5 T 14-10-2018 AMIS_26470 7e82463ac219f4714198197e6b078cc4 2039 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1481 1569 8.7E-20 T 14-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 AMIS_19200 4aa4376e1cbb0a800a063d5bfa93fb4f 297 Gene3D G3DSA:3.10.180.10 3 127 5.3E-34 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_19200 4aa4376e1cbb0a800a063d5bfa93fb4f 297 ProSitePatterns PS00082 Extradiol ring-cleavage dioxygenases signature. 242 263 - T 14-10-2018 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II GO:0003824|GO:0006725|GO:0008198|GO:0055114 AMIS_19200 4aa4376e1cbb0a800a063d5bfa93fb4f 297 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 139 264 5.0E-22 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMIS_19200 4aa4376e1cbb0a800a063d5bfa93fb4f 297 SUPERFAMILY SSF54593 4 125 8.12E-22 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_19200 4aa4376e1cbb0a800a063d5bfa93fb4f 297 Gene3D G3DSA:3.10.180.10 130 295 8.3E-54 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_19200 4aa4376e1cbb0a800a063d5bfa93fb4f 297 SUPERFAMILY SSF54593 132 290 3.03E-35 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_58290 c4453d48c12c80ee9375381a4af5bd41 190 Pfam PF04892 VanZ like family 76 162 4.3E-15 T 14-10-2018 IPR006976 VanZ-like AMIS_61970 b8ac740b2da99413e2704f0cb92ecbc1 192 Gene3D G3DSA:1.10.357.10 5 187 1.8E-43 T 14-10-2018 AMIS_61970 b8ac740b2da99413e2704f0cb92ecbc1 192 SUPERFAMILY SSF48498 83 188 8.9E-15 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_61970 b8ac740b2da99413e2704f0cb92ecbc1 192 SUPERFAMILY SSF46689 7 73 5.82E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_61970 b8ac740b2da99413e2704f0cb92ecbc1 192 Pfam PF13305 WHG domain 87 165 1.8E-11 T 14-10-2018 IPR025996 WHG domain AMIS_61970 b8ac740b2da99413e2704f0cb92ecbc1 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 57 4.1E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_24300 0de85e70988a7cbe4dfd23e73a5d03e2 185 SUPERFAMILY SSF46894 120 171 1.36E-9 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_24300 0de85e70988a7cbe4dfd23e73a5d03e2 185 Pfam PF04542 Sigma-70 region 2 25 94 9.7E-5 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_24300 0de85e70988a7cbe4dfd23e73a5d03e2 185 SUPERFAMILY SSF88946 21 106 3.92E-10 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_24300 0de85e70988a7cbe4dfd23e73a5d03e2 185 Pfam PF08281 Sigma-70, region 4 129 171 6.6E-8 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_24300 0de85e70988a7cbe4dfd23e73a5d03e2 185 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 23 174 7.1E-14 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_24300 0de85e70988a7cbe4dfd23e73a5d03e2 185 Gene3D G3DSA:1.10.10.10 100 181 1.5E-10 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_24300 0de85e70988a7cbe4dfd23e73a5d03e2 185 SMART SM00421 126 181 0.002 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_24300 0de85e70988a7cbe4dfd23e73a5d03e2 185 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 171 3.1E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_24300 0de85e70988a7cbe4dfd23e73a5d03e2 185 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 143 159 3.1E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_24300 0de85e70988a7cbe4dfd23e73a5d03e2 185 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 129 143 3.1E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_65950 90f223479ea1eb2ad489f03281ce790e 351 SUPERFAMILY SSF51735 1 344 1.92E-61 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_65950 90f223479ea1eb2ad489f03281ce790e 351 Gene3D G3DSA:3.40.50.720 2 274 2.1E-63 T 14-10-2018 AMIS_65950 90f223479ea1eb2ad489f03281ce790e 351 Pfam PF01370 NAD dependent epimerase/dehydratase family 1 274 9.2E-33 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AMIS_65950 90f223479ea1eb2ad489f03281ce790e 351 Gene3D G3DSA:3.90.25.10 210 342 2.1E-63 T 14-10-2018 AMIS_12040 1f90daacc9384b72db6a4885501261f6 287 Pfam PF00950 ABC 3 transport family 6 258 5.7E-64 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 AMIS_12040 1f90daacc9384b72db6a4885501261f6 287 SUPERFAMILY SSF81345 3 256 7.32E-32 T 14-10-2018 IPR037294 ABC transporter, BtuC-like AMIS_12040 1f90daacc9384b72db6a4885501261f6 287 Gene3D G3DSA:1.10.3470.10 37 260 6.3E-6 T 14-10-2018 IPR037294 ABC transporter, BtuC-like AMIS_9800 001c59af8cf87ceb131942dd17e54ef8 328 Gene3D G3DSA:2.60.40.290 240 328 1.4E-23 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 AMIS_9800 001c59af8cf87ceb131942dd17e54ef8 328 Gene3D G3DSA:3.20.20.370 23 223 4.9E-57 T 14-10-2018 AMIS_9800 001c59af8cf87ceb131942dd17e54ef8 328 Pfam PF01522 Polysaccharide deacetylase 40 156 6.2E-29 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMIS_9800 001c59af8cf87ceb131942dd17e54ef8 328 SMART SM00637 243 325 4.3E-19 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 AMIS_9800 001c59af8cf87ceb131942dd17e54ef8 328 SUPERFAMILY SSF88713 35 214 7.91E-54 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AMIS_9800 001c59af8cf87ceb131942dd17e54ef8 328 SUPERFAMILY SSF49384 240 325 2.65E-18 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 AMIS_10090 8122b8e8cb1cd024139f4622b637a174 289 SUPERFAMILY SSF55781 152 276 2.07E-15 T 14-10-2018 AMIS_10090 8122b8e8cb1cd024139f4622b637a174 289 SUPERFAMILY SSF52172 1 116 4.27E-28 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_10090 8122b8e8cb1cd024139f4622b637a174 289 Pfam PF00072 Response regulator receiver domain 4 110 1.1E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_10090 8122b8e8cb1cd024139f4622b637a174 289 Gene3D G3DSA:3.40.50.2300 1 127 6.4E-28 T 14-10-2018 AMIS_10090 8122b8e8cb1cd024139f4622b637a174 289 Pfam PF01590 GAF domain 152 274 4.9E-8 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_10090 8122b8e8cb1cd024139f4622b637a174 289 Gene3D G3DSA:3.30.450.40 128 285 4.2E-15 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_10090 8122b8e8cb1cd024139f4622b637a174 289 SMART SM00448 2 110 1.1E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_23720 6353a88ee1c23b994409889479e42d5c 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 53 9.0E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_23720 6353a88ee1c23b994409889479e42d5c 207 Gene3D G3DSA:1.10.357.10 1 198 6.0E-20 T 14-10-2018 AMIS_23720 6353a88ee1c23b994409889479e42d5c 207 SUPERFAMILY SSF46689 3 79 2.0E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_23720 6353a88ee1c23b994409889479e42d5c 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 2.1E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_23720 6353a88ee1c23b994409889479e42d5c 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 2.1E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_75950 0456d542ee8274afb706ffa4e48e1c84 272 Gene3D G3DSA:3.20.20.150 2 265 1.6E-36 T 14-10-2018 AMIS_75950 0456d542ee8274afb706ffa4e48e1c84 272 Pfam PF01261 Xylose isomerase-like TIM barrel 23 210 1.1E-13 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AMIS_75950 0456d542ee8274afb706ffa4e48e1c84 272 SUPERFAMILY SSF51658 15 264 2.75E-40 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily AMIS_5730 66cdc073abde62a53e3cecb4bd333b2b 337 Pfam PF00296 Luciferase-like monooxygenase 14 309 2.2E-35 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMIS_5730 66cdc073abde62a53e3cecb4bd333b2b 337 SUPERFAMILY SSF51679 8 333 2.36E-72 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_5730 66cdc073abde62a53e3cecb4bd333b2b 337 Gene3D G3DSA:3.20.20.30 4 337 7.6E-92 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_5730 66cdc073abde62a53e3cecb4bd333b2b 337 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 9 333 3.4E-117 T 14-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 AMIS_48170 dc9ef7a85b85d40aa333497691a3de5a 480 Gene3D G3DSA:1.20.5.320 439 474 1.7E-18 T 14-10-2018 AMIS_48170 dc9ef7a85b85d40aa333497691a3de5a 480 Gene3D G3DSA:3.40.50.720 1 182 1.6E-55 T 14-10-2018 AMIS_48170 dc9ef7a85b85d40aa333497691a3de5a 480 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 256 268 - T 14-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AMIS_48170 dc9ef7a85b85d40aa333497691a3de5a 480 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 122 147 2.4E-81 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AMIS_48170 dc9ef7a85b85d40aa333497691a3de5a 480 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 252 279 2.4E-81 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AMIS_48170 dc9ef7a85b85d40aa333497691a3de5a 480 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 6 29 2.4E-81 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AMIS_48170 dc9ef7a85b85d40aa333497691a3de5a 480 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 170 198 2.4E-81 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AMIS_48170 dc9ef7a85b85d40aa333497691a3de5a 480 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 360 382 2.4E-81 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AMIS_48170 dc9ef7a85b85d40aa333497691a3de5a 480 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 69 98 2.4E-81 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AMIS_48170 dc9ef7a85b85d40aa333497691a3de5a 480 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 7 174 1.0E-49 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 AMIS_48170 dc9ef7a85b85d40aa333497691a3de5a 480 SUPERFAMILY SSF48179 179 473 2.55E-118 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMIS_48170 dc9ef7a85b85d40aa333497691a3de5a 480 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 181 470 6.2E-123 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AMIS_48170 dc9ef7a85b85d40aa333497691a3de5a 480 SMART SM01350 181 471 2.8E-202 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AMIS_48170 dc9ef7a85b85d40aa333497691a3de5a 480 Gene3D G3DSA:1.10.1040.10 183 438 2.8E-100 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AMIS_48170 dc9ef7a85b85d40aa333497691a3de5a 480 SUPERFAMILY SSF51735 6 179 1.28E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_48170 dc9ef7a85b85d40aa333497691a3de5a 480 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 7 471 7.8E-206 T 14-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AMIS_48170 dc9ef7a85b85d40aa333497691a3de5a 480 PIRSF PIRSF000109 1 478 2.0E-199 T 14-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AMIS_69790 9539d2ffe52a02a651b29067decc4c6f 507 Pfam PF13520 Amino acid permease 29 472 4.3E-62 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AMIS_69790 9539d2ffe52a02a651b29067decc4c6f 507 PIRSF PIRSF006060 11 505 1.5E-60 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AMIS_69790 9539d2ffe52a02a651b29067decc4c6f 507 Gene3D G3DSA:1.20.1740.10 36 477 1.7E-32 T 14-10-2018 AMIS_37200 e037e14abe7cdec075d79fe18be85949 247 SUPERFAMILY SSF51735 3 245 1.96E-86 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_37200 e037e14abe7cdec075d79fe18be85949 247 Gene3D G3DSA:3.40.50.720 2 246 1.6E-86 T 14-10-2018 AMIS_37200 e037e14abe7cdec075d79fe18be85949 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 244 7.0E-73 T 14-10-2018 AMIS_37200 e037e14abe7cdec075d79fe18be85949 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 6.6E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_37200 e037e14abe7cdec075d79fe18be85949 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 6.6E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_37200 e037e14abe7cdec075d79fe18be85949 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 6.6E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_37200 e037e14abe7cdec075d79fe18be85949 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 135 163 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMIS_37200 e037e14abe7cdec075d79fe18be85949 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 179 1.1E-5 T 14-10-2018 AMIS_37200 e037e14abe7cdec075d79fe18be85949 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 3.3E-50 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_37200 e037e14abe7cdec075d79fe18be85949 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 3.3E-50 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_37200 e037e14abe7cdec075d79fe18be85949 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 3.3E-50 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_37200 e037e14abe7cdec075d79fe18be85949 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.3E-50 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_37200 e037e14abe7cdec075d79fe18be85949 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 3.3E-50 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_37200 e037e14abe7cdec075d79fe18be85949 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 3.3E-50 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_60740 602309e9722ed83b29eab6f04841bddf 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.1E-22 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_60740 602309e9722ed83b29eab6f04841bddf 299 SUPERFAMILY SSF46785 2 111 5.45E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_60740 602309e9722ed83b29eab6f04841bddf 299 Pfam PF03466 LysR substrate binding domain 87 292 9.6E-39 T 14-10-2018 IPR005119 LysR, substrate-binding AMIS_60740 602309e9722ed83b29eab6f04841bddf 299 SUPERFAMILY SSF53850 88 295 4.34E-39 T 14-10-2018 AMIS_60740 602309e9722ed83b29eab6f04841bddf 299 Gene3D G3DSA:1.10.10.10 1 88 1.5E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_60740 602309e9722ed83b29eab6f04841bddf 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.0E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_60740 602309e9722ed83b29eab6f04841bddf 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.0E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_60740 602309e9722ed83b29eab6f04841bddf 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.0E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_60740 602309e9722ed83b29eab6f04841bddf 299 Gene3D G3DSA:3.40.190.290 91 297 1.3E-41 T 14-10-2018 AMIS_8190 e879f4b61024521b9d73d4e33ef94879 400 PRINTS PR00359 B-class P450 signature 340 349 7.5E-31 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_8190 e879f4b61024521b9d73d4e33ef94879 400 PRINTS PR00359 B-class P450 signature 90 101 7.5E-31 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_8190 e879f4b61024521b9d73d4e33ef94879 400 PRINTS PR00359 B-class P450 signature 137 153 7.5E-31 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_8190 e879f4b61024521b9d73d4e33ef94879 400 PRINTS PR00359 B-class P450 signature 291 318 7.5E-31 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_8190 e879f4b61024521b9d73d4e33ef94879 400 PRINTS PR00359 B-class P450 signature 154 169 7.5E-31 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_8190 e879f4b61024521b9d73d4e33ef94879 400 PRINTS PR00359 B-class P450 signature 319 334 7.5E-31 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_8190 e879f4b61024521b9d73d4e33ef94879 400 PRINTS PR00359 B-class P450 signature 274 285 7.5E-31 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_8190 e879f4b61024521b9d73d4e33ef94879 400 PRINTS PR00359 B-class P450 signature 349 360 7.5E-31 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_8190 e879f4b61024521b9d73d4e33ef94879 400 Gene3D G3DSA:1.10.630.10 7 400 8.8E-101 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_8190 e879f4b61024521b9d73d4e33ef94879 400 SUPERFAMILY SSF48264 10 399 6.68E-77 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_8190 e879f4b61024521b9d73d4e33ef94879 400 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 342 351 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 AMIS_8190 e879f4b61024521b9d73d4e33ef94879 400 Pfam PF00067 Cytochrome P450 223 368 2.0E-21 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_16010 46b44146fee7af69d769d98f33986043 233 SUPERFAMILY SSF109854 4 149 2.41E-34 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes AMIS_16010 46b44146fee7af69d769d98f33986043 233 Pfam PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain 12 146 1.7E-23 T 14-10-2018 IPR024344 Mycothiol-dependent maleylpyruvate isomerase, metal-binding domain GO:0046872 AMIS_16010 46b44146fee7af69d769d98f33986043 233 Gene3D G3DSA:1.20.120.450 8 150 1.7E-37 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes AMIS_16010 46b44146fee7af69d769d98f33986043 233 TIGRFAM TIGR03083 TIGR03083: uncharacterized Actinobacterial protein TIGR03083 12 212 5.8E-27 T 14-10-2018 IPR017517 Conserved hypothetical protein CHP03083, actinobacterial-type AMIS_16010 46b44146fee7af69d769d98f33986043 233 SUPERFAMILY SSF55718 154 232 3.88E-10 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily AMIS_80780 40eaed99356d911644e0c00c99667c3a 404 SUPERFAMILY SSF63882 7 169 5.89E-34 T 14-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMIS_80780 40eaed99356d911644e0c00c99667c3a 404 SUPERFAMILY SSF63867 328 397 6.67E-8 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMIS_80780 40eaed99356d911644e0c00c99667c3a 404 Pfam PF03453 MoeA N-terminal region (domain I and II) 10 162 8.6E-31 T 14-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMIS_80780 40eaed99356d911644e0c00c99667c3a 404 SMART SM00852 175 318 2.0E-22 T 14-10-2018 IPR001453 MoaB/Mog domain AMIS_80780 40eaed99356d911644e0c00c99667c3a 404 Pfam PF03454 MoeA C-terminal region (domain IV) 333 397 5.2E-9 T 14-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMIS_80780 40eaed99356d911644e0c00c99667c3a 404 Gene3D G3DSA:3.90.105.10 27 169 4.6E-79 T 14-10-2018 AMIS_80780 40eaed99356d911644e0c00c99667c3a 404 Gene3D G3DSA:2.40.340.10 329 392 4.6E-79 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMIS_80780 40eaed99356d911644e0c00c99667c3a 404 Pfam PF00994 Probable molybdopterin binding domain 176 316 2.0E-16 T 14-10-2018 IPR001453 MoaB/Mog domain AMIS_80780 40eaed99356d911644e0c00c99667c3a 404 SUPERFAMILY SSF53218 171 321 3.14E-25 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily AMIS_80780 40eaed99356d911644e0c00c99667c3a 404 Gene3D G3DSA:2.170.190.11 51 136 4.6E-79 T 14-10-2018 AMIS_80780 40eaed99356d911644e0c00c99667c3a 404 Gene3D G3DSA:3.40.980.10 170 328 4.6E-79 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily AMIS_79430 1c3749db862cf1b1956c213154dbcb36 157 Gene3D G3DSA:3.30.530.20 2 146 2.3E-26 T 14-10-2018 IPR023393 START-like domain superfamily AMIS_79430 1c3749db862cf1b1956c213154dbcb36 157 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 15 145 1.4E-11 T 14-10-2018 IPR019587 Polyketide cyclase/dehydrase AMIS_79430 1c3749db862cf1b1956c213154dbcb36 157 SUPERFAMILY SSF55961 15 146 6.68E-22 T 14-10-2018 AMIS_11000 f8ba27493f49576b2d054a05fead276f 273 Gene3D G3DSA:2.40.260.10 118 273 1.2E-26 T 14-10-2018 IPR023365 Sortase domain superfamily AMIS_11000 f8ba27493f49576b2d054a05fead276f 273 SUPERFAMILY SSF63817 115 269 1.1E-16 T 14-10-2018 IPR023365 Sortase domain superfamily AMIS_11000 f8ba27493f49576b2d054a05fead276f 273 Pfam PF04203 Sortase family 126 268 4.5E-18 T 14-10-2018 IPR005754 Sortase family AMIS_40750 48c85c5d71679276656cc75023bd1936 201 Gene3D G3DSA:1.10.357.10 7 201 1.8E-42 T 14-10-2018 AMIS_40750 48c85c5d71679276656cc75023bd1936 201 SUPERFAMILY SSF46689 3 77 4.74E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_40750 48c85c5d71679276656cc75023bd1936 201 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 62 9.3E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_74440 6784f0508afefb6defa480b4d705c568 521 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 102 116 3.9E-6 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AMIS_74440 6784f0508afefb6defa480b4d705c568 521 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 136 154 3.9E-6 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AMIS_74440 6784f0508afefb6defa480b4d705c568 521 Pfam PF01039 Carboxyl transferase domain 35 519 2.5E-197 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 AMIS_74440 6784f0508afefb6defa480b4d705c568 521 SUPERFAMILY SSF52096 250 521 1.38E-87 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMIS_74440 6784f0508afefb6defa480b4d705c568 521 SUPERFAMILY SSF52096 13 261 3.32E-79 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMIS_74440 6784f0508afefb6defa480b4d705c568 521 Gene3D G3DSA:3.90.226.10 2 265 7.3E-97 T 14-10-2018 AMIS_74440 6784f0508afefb6defa480b4d705c568 521 Gene3D G3DSA:3.90.226.10 269 521 1.5E-90 T 14-10-2018 AMIS_68060 e96ab0a71e19c7e6ceacec009bc48018 115 Gene3D G3DSA:1.20.890.50 81 115 2.3E-16 T 14-10-2018 AMIS_68060 e96ab0a71e19c7e6ceacec009bc48018 115 Pfam PF11774 Lsr2 1 113 7.9E-41 T 14-10-2018 IPR024412 Lsr2 AMIS_68060 e96ab0a71e19c7e6ceacec009bc48018 115 ProDom PD026347 LSR2-LIKE LSR2 ANTIGEN IMMUNE PRECURSOR RESPONSE SIGNAL PLASMID LYSYL GP61 1 111 6.0E-21 T 14-10-2018 IPR024412 Lsr2 AMIS_68060 e96ab0a71e19c7e6ceacec009bc48018 115 Gene3D G3DSA:3.30.60.230 1 59 1.5E-23 T 14-10-2018 AMIS_69470 45a6bfa6063ffef7b67c150e04789eed 239 SMART SM00419 173 221 0.0018 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMIS_69470 45a6bfa6063ffef7b67c150e04789eed 239 SUPERFAMILY SSF51206 15 144 2.62E-26 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like AMIS_69470 45a6bfa6063ffef7b67c150e04789eed 239 SUPERFAMILY SSF46785 152 229 1.03E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_69470 45a6bfa6063ffef7b67c150e04789eed 239 Pfam PF00027 Cyclic nucleotide-binding domain 33 118 3.8E-17 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain AMIS_69470 45a6bfa6063ffef7b67c150e04789eed 239 SMART SM00100 15 133 1.5E-13 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain AMIS_69470 45a6bfa6063ffef7b67c150e04789eed 239 Gene3D G3DSA:2.60.120.10 13 150 2.5E-31 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMIS_69470 45a6bfa6063ffef7b67c150e04789eed 239 Gene3D G3DSA:1.10.10.10 152 228 9.4E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_69470 45a6bfa6063ffef7b67c150e04789eed 239 Pfam PF13545 Crp-like helix-turn-helix domain 153 228 3.1E-15 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMIS_50700 5844632bb01ccc4dadb8956a76056280 332 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 4 317 1.1E-136 T 14-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 AMIS_50700 5844632bb01ccc4dadb8956a76056280 332 Gene3D G3DSA:3.90.25.10 185 312 2.9E-113 T 14-10-2018 AMIS_50700 5844632bb01ccc4dadb8956a76056280 332 Gene3D G3DSA:3.40.50.720 5 299 2.9E-113 T 14-10-2018 AMIS_50700 5844632bb01ccc4dadb8956a76056280 332 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 295 3.5E-77 T 14-10-2018 IPR016040 NAD(P)-binding domain AMIS_50700 5844632bb01ccc4dadb8956a76056280 332 SUPERFAMILY SSF51735 1 321 9.36E-90 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_44850 22079e456859ff29e3ed79fd6524a89e 222 SUPERFAMILY SSF55729 85 216 2.96E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_44850 22079e456859ff29e3ed79fd6524a89e 222 Gene3D G3DSA:3.40.630.30 1 220 3.4E-64 T 14-10-2018 AMIS_44850 22079e456859ff29e3ed79fd6524a89e 222 Pfam PF08445 FR47-like protein 131 212 1.9E-22 T 14-10-2018 IPR013653 FR47-like GO:0016747 AMIS_32960 22541122798b8421a3e2a67011798920 393 SUPERFAMILY SSF101353 231 378 1.83E-30 T 14-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 AMIS_32960 22541122798b8421a3e2a67011798920 393 Gene3D G3DSA:3.30.930.10 5 226 2.8E-68 T 14-10-2018 AMIS_32960 22541122798b8421a3e2a67011798920 393 PRINTS PR00980 Alanyl-tRNA synthetase signature 254 270 3.8E-21 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AMIS_32960 22541122798b8421a3e2a67011798920 393 PRINTS PR00980 Alanyl-tRNA synthetase signature 211 224 3.8E-21 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AMIS_32960 22541122798b8421a3e2a67011798920 393 PRINTS PR00980 Alanyl-tRNA synthetase signature 70 81 3.8E-21 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AMIS_32960 22541122798b8421a3e2a67011798920 393 PRINTS PR00980 Alanyl-tRNA synthetase signature 184 195 3.8E-21 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AMIS_32960 22541122798b8421a3e2a67011798920 393 PRINTS PR00980 Alanyl-tRNA synthetase signature 278 291 3.8E-21 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AMIS_32960 22541122798b8421a3e2a67011798920 393 Pfam PF01411 tRNA synthetases class II (A) 8 381 1.2E-83 T 14-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 AMIS_32960 22541122798b8421a3e2a67011798920 393 SUPERFAMILY SSF55681 6 230 2.82E-61 T 14-10-2018 AMIS_39800 b1bec9b8536631e79923fbb41dea2405 702 Gene3D G3DSA:3.40.710.10 313 702 1.3E-64 T 14-10-2018 AMIS_39800 b1bec9b8536631e79923fbb41dea2405 702 Gene3D G3DSA:1.10.3810.10 65 274 4.6E-67 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMIS_39800 b1bec9b8536631e79923fbb41dea2405 702 Pfam PF00912 Transglycosylase 75 258 4.6E-57 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMIS_39800 b1bec9b8536631e79923fbb41dea2405 702 SUPERFAMILY SSF56601 244 701 7.45E-65 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMIS_39800 b1bec9b8536631e79923fbb41dea2405 702 SUPERFAMILY SSF53955 60 281 2.64E-65 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily AMIS_39800 b1bec9b8536631e79923fbb41dea2405 702 Pfam PF00905 Penicillin binding protein transpeptidase domain 362 647 7.0E-23 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AMIS_35720 2bafe393c37d756432501d045da06b0c 466 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 281 440 1.9E-10 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain AMIS_35720 2bafe393c37d756432501d045da06b0c 466 Gene3D G3DSA:3.40.50.1110 228 454 1.2E-18 T 14-10-2018 IPR036514 SGNH hydrolase superfamily AMIS_35720 2bafe393c37d756432501d045da06b0c 466 Gene3D G3DSA:3.20.20.370 25 227 4.2E-41 T 14-10-2018 AMIS_35720 2bafe393c37d756432501d045da06b0c 466 SUPERFAMILY SSF88713 33 222 1.16E-40 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AMIS_35720 2bafe393c37d756432501d045da06b0c 466 SUPERFAMILY SSF52266 229 358 8.01E-11 T 14-10-2018 AMIS_35720 2bafe393c37d756432501d045da06b0c 466 Pfam PF01522 Polysaccharide deacetylase 34 149 1.1E-23 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMIS_71380 e02261a91226fe96ef4eb167905ce115 788 SMART SM00052 517 764 1.8E-95 T 14-10-2018 IPR001633 EAL domain AMIS_71380 e02261a91226fe96ef4eb167905ce115 788 Gene3D G3DSA:3.20.20.450 518 772 1.1E-86 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_71380 e02261a91226fe96ef4eb167905ce115 788 SUPERFAMILY SSF55073 358 503 6.98E-38 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_71380 e02261a91226fe96ef4eb167905ce115 788 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 350 503 3.1E-30 T 14-10-2018 IPR000160 GGDEF domain AMIS_71380 e02261a91226fe96ef4eb167905ce115 788 SUPERFAMILY SSF141868 525 774 2.48E-79 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_71380 e02261a91226fe96ef4eb167905ce115 788 Pfam PF00563 EAL domain 524 759 4.8E-66 T 14-10-2018 IPR001633 EAL domain AMIS_71380 e02261a91226fe96ef4eb167905ce115 788 Pfam PF00990 Diguanylate cyclase, GGDEF domain 353 502 2.0E-38 T 14-10-2018 IPR000160 GGDEF domain AMIS_71380 e02261a91226fe96ef4eb167905ce115 788 Gene3D G3DSA:3.30.70.270 348 513 2.1E-45 T 14-10-2018 AMIS_71380 e02261a91226fe96ef4eb167905ce115 788 SMART SM00267 336 507 6.0E-47 T 14-10-2018 IPR000160 GGDEF domain AMIS_5770 b3d566403e6c66b7c2c9addeb5c923ce 155 SUPERFAMILY SSF52038 31 95 5.36E-16 T 14-10-2018 IPR035905 Barstar-like superfamily AMIS_5770 b3d566403e6c66b7c2c9addeb5c923ce 155 Gene3D G3DSA:3.30.370.10 31 125 5.1E-12 T 14-10-2018 IPR035905 Barstar-like superfamily AMIS_5770 b3d566403e6c66b7c2c9addeb5c923ce 155 Pfam PF01337 Barstar (barnase inhibitor) 35 100 1.1E-16 T 14-10-2018 IPR000468 Barstar (barnase inhibitor) AMIS_76860 d7900e2106ed5094161dca4af924f786 260 Gene3D G3DSA:3.90.79.10 17 245 3.6E-58 T 14-10-2018 AMIS_76860 d7900e2106ed5094161dca4af924f786 260 Pfam PF00293 NUDIX domain 22 111 8.7E-7 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMIS_76860 d7900e2106ed5094161dca4af924f786 260 SUPERFAMILY SSF55811 9 220 3.81E-17 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMIS_64570 dcc3c1645689b9573b70e4451dd3472e 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 230 1.2E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_64570 dcc3c1645689b9573b70e4451dd3472e 233 SUPERFAMILY SSF46894 136 230 2.16E-27 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_64570 dcc3c1645689b9573b70e4451dd3472e 233 Gene3D G3DSA:1.10.10.10 139 233 1.1E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_64570 dcc3c1645689b9573b70e4451dd3472e 233 Gene3D G3DSA:3.40.50.2300 10 138 2.4E-32 T 14-10-2018 AMIS_64570 dcc3c1645689b9573b70e4451dd3472e 233 SUPERFAMILY SSF52172 9 137 3.56E-37 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_64570 dcc3c1645689b9573b70e4451dd3472e 233 SMART SM00862 158 231 8.7E-26 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_64570 dcc3c1645689b9573b70e4451dd3472e 233 Pfam PF00072 Response regulator receiver domain 14 124 3.3E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_64570 dcc3c1645689b9573b70e4451dd3472e 233 SMART SM00448 12 123 1.7E-38 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_61850 f2d34439e3954ad5a52304e8ba9ffa11 64 Pfam PF01632 Ribosomal protein L35 2 62 2.3E-20 T 14-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_61850 f2d34439e3954ad5a52304e8ba9ffa11 64 SUPERFAMILY SSF143034 2 63 1.06E-18 T 14-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_61850 f2d34439e3954ad5a52304e8ba9ffa11 64 Gene3D G3DSA:2.40.50.530 2 64 1.6E-20 T 14-10-2018 AMIS_61850 f2d34439e3954ad5a52304e8ba9ffa11 64 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 63 1.8E-20 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AMIS_61850 f2d34439e3954ad5a52304e8ba9ffa11 64 PRINTS PR00064 Ribosomal protein L35 signature 36 54 8.2E-13 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AMIS_61850 f2d34439e3954ad5a52304e8ba9ffa11 64 PRINTS PR00064 Ribosomal protein L35 signature 3 20 8.2E-13 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AMIS_61850 f2d34439e3954ad5a52304e8ba9ffa11 64 PRINTS PR00064 Ribosomal protein L35 signature 21 35 8.2E-13 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AMIS_61850 f2d34439e3954ad5a52304e8ba9ffa11 64 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 15.604 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AMIS_6230 f95689c30a17c71bfb16286667bc78e9 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 378 396 2.5E-84 T 14-10-2018 AMIS_6230 f95689c30a17c71bfb16286667bc78e9 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 279 298 2.5E-84 T 14-10-2018 AMIS_6230 f95689c30a17c71bfb16286667bc78e9 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 18 36 2.5E-84 T 14-10-2018 AMIS_6230 f95689c30a17c71bfb16286667bc78e9 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 414 432 2.5E-84 T 14-10-2018 AMIS_6230 f95689c30a17c71bfb16286667bc78e9 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 323 345 2.5E-84 T 14-10-2018 AMIS_6230 f95689c30a17c71bfb16286667bc78e9 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 192 215 2.5E-84 T 14-10-2018 AMIS_6230 f95689c30a17c71bfb16286667bc78e9 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 166 191 2.5E-84 T 14-10-2018 AMIS_6230 f95689c30a17c71bfb16286667bc78e9 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 73 93 2.5E-84 T 14-10-2018 AMIS_6230 f95689c30a17c71bfb16286667bc78e9 446 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 15 441 7.3E-127 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AMIS_6230 f95689c30a17c71bfb16286667bc78e9 446 Gene3D G3DSA:1.10.3370.10 1 441 8.9E-160 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AMIS_6230 f95689c30a17c71bfb16286667bc78e9 446 Hamap MF_01465 Protein translocase subunit SecY [secY]. 5 445 28.593 T 14-10-2018 IPR026593 Protein translocase subunit SecY AMIS_6230 f95689c30a17c71bfb16286667bc78e9 446 SUPERFAMILY SSF103491 2 436 1.14E-121 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AMIS_6230 f95689c30a17c71bfb16286667bc78e9 446 PIRSF PIRSF004557 1 446 3.4E-118 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AMIS_6230 f95689c30a17c71bfb16286667bc78e9 446 Pfam PF00344 SecY translocase 74 429 1.7E-115 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AMIS_6230 f95689c30a17c71bfb16286667bc78e9 446 ProSitePatterns PS00756 Protein secY signature 2. 185 202 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AMIS_6230 f95689c30a17c71bfb16286667bc78e9 446 ProSitePatterns PS00755 Protein secY signature 1. 74 93 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AMIS_22360 e9c0ec86965a843e7e81ec472d6d81a9 266 SUPERFAMILY SSF53474 33 263 7.03E-34 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_22360 e9c0ec86965a843e7e81ec472d6d81a9 266 Pfam PF12697 Alpha/beta hydrolase family 41 259 5.0E-19 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_22360 e9c0ec86965a843e7e81ec472d6d81a9 266 Gene3D G3DSA:3.40.50.1820 34 266 4.3E-45 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_70510 4f618e006a8a47d536de6e7f5f8fc033 456 SUPERFAMILY SSF111352 7 400 3.01E-127 T 14-10-2018 AMIS_70510 4f618e006a8a47d536de6e7f5f8fc033 456 TIGRFAM TIGR00836 amt: ammonium transporter 11 419 1.7E-141 T 14-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 AMIS_70510 4f618e006a8a47d536de6e7f5f8fc033 456 ProSitePatterns PS01219 Ammonium transporters signature. 173 198 - T 14-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 AMIS_70510 4f618e006a8a47d536de6e7f5f8fc033 456 Pfam PF00909 Ammonium Transporter Family 13 419 2.7E-131 T 14-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 AMIS_70510 4f618e006a8a47d536de6e7f5f8fc033 456 Gene3D G3DSA:1.10.3430.10 2 426 1.8E-144 T 14-10-2018 IPR029020 Ammonium/urea transporter AMIS_51570 fba6a56b12c2e1550eba85f9fdd0fafb 276 Gene3D G3DSA:1.10.10.10 7 77 9.6E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_51570 fba6a56b12c2e1550eba85f9fdd0fafb 276 SUPERFAMILY SSF53697 95 251 9.57E-10 T 14-10-2018 AMIS_51570 fba6a56b12c2e1550eba85f9fdd0fafb 276 SUPERFAMILY SSF46689 10 80 6.45E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_51570 fba6a56b12c2e1550eba85f9fdd0fafb 276 Gene3D G3DSA:3.40.50.10490 92 271 2.4E-16 T 14-10-2018 AMIS_51570 fba6a56b12c2e1550eba85f9fdd0fafb 276 Pfam PF01380 SIS domain 130 230 3.1E-6 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AMIS_51570 fba6a56b12c2e1550eba85f9fdd0fafb 276 Pfam PF01418 Helix-turn-helix domain, rpiR family 11 75 1.8E-11 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AMIS_9950 8d8dfeacc5b35494344ff7b0a0799ad8 203 SUPERFAMILY SSF55729 8 198 7.21E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_9950 8d8dfeacc5b35494344ff7b0a0799ad8 203 Pfam PF13508 Acetyltransferase (GNAT) domain 127 181 6.5E-8 T 14-10-2018 IPR000182 GNAT domain AMIS_9950 8d8dfeacc5b35494344ff7b0a0799ad8 203 Gene3D G3DSA:3.40.630.30 7 202 9.7E-44 T 14-10-2018 AMIS_58950 4230947e57c2c4f30a8ab20ae324d894 336 SUPERFAMILY SSF50129 1 172 7.0E-57 T 14-10-2018 IPR011032 GroES-like superfamily AMIS_58950 4230947e57c2c4f30a8ab20ae324d894 336 Gene3D G3DSA:3.40.50.720 148 285 1.9E-121 T 14-10-2018 AMIS_58950 4230947e57c2c4f30a8ab20ae324d894 336 Pfam PF00107 Zinc-binding dehydrogenase 175 298 1.9E-28 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMIS_58950 4230947e57c2c4f30a8ab20ae324d894 336 SUPERFAMILY SSF51735 138 303 7.3E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_58950 4230947e57c2c4f30a8ab20ae324d894 336 Gene3D G3DSA:3.90.180.10 5 324 1.9E-121 T 14-10-2018 AMIS_58950 4230947e57c2c4f30a8ab20ae324d894 336 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 133 3.6E-32 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMIS_58950 4230947e57c2c4f30a8ab20ae324d894 336 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 60 74 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AMIS_58950 4230947e57c2c4f30a8ab20ae324d894 336 SMART SM00829 8 334 1.3E-7 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMIS_45710 9045dde58b7c946f9639e69819c42aad 230 Pfam PF00440 Bacterial regulatory proteins, tetR family 48 93 2.3E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_45710 9045dde58b7c946f9639e69819c42aad 230 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 69 92 3.5E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_45710 9045dde58b7c946f9639e69819c42aad 230 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 48 61 3.5E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_45710 9045dde58b7c946f9639e69819c42aad 230 SUPERFAMILY SSF46689 38 108 2.44E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_45710 9045dde58b7c946f9639e69819c42aad 230 Gene3D G3DSA:1.10.357.10 36 230 1.1E-22 T 14-10-2018 AMIS_34180 8c6e91305fca6a76152815c5c104fbee 162 SUPERFAMILY SSF55961 16 158 6.32E-35 T 14-10-2018 AMIS_34180 8c6e91305fca6a76152815c5c104fbee 162 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 25 157 3.2E-18 T 14-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like AMIS_34180 8c6e91305fca6a76152815c5c104fbee 162 Gene3D G3DSA:3.30.530.20 1 159 9.8E-35 T 14-10-2018 IPR023393 START-like domain superfamily AMIS_67700 c102cc84139d5856acaf6398d8b1e60d 300 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 87 109 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AMIS_67700 c102cc84139d5856acaf6398d8b1e60d 300 Gene3D G3DSA:1.20.120.1760 13 174 9.8E-32 T 14-10-2018 AMIS_67700 c102cc84139d5856acaf6398d8b1e60d 300 Pfam PF01066 CDP-alcohol phosphatidyltransferase 43 109 4.0E-11 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AMIS_66400 cf14972962ee4a084fe9f90185a7c567 387 Pfam PF13692 Glycosyl transferases group 1 201 336 9.0E-16 T 14-10-2018 AMIS_66400 cf14972962ee4a084fe9f90185a7c567 387 Gene3D G3DSA:3.40.50.2000 181 347 1.0E-23 T 14-10-2018 AMIS_66400 cf14972962ee4a084fe9f90185a7c567 387 Pfam PF13579 Glycosyl transferase 4-like domain 10 178 1.4E-15 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AMIS_66400 cf14972962ee4a084fe9f90185a7c567 387 SUPERFAMILY SSF53756 6 364 4.89E-49 T 14-10-2018 AMIS_66400 cf14972962ee4a084fe9f90185a7c567 387 Gene3D G3DSA:3.40.50.2000 1 180 2.8E-13 T 14-10-2018 AMIS_19180 f64f3866a13cc63c53f6ff12fc8a1eac 388 Gene3D G3DSA:1.10.540.10 1 106 4.6E-32 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMIS_19180 f64f3866a13cc63c53f6ff12fc8a1eac 388 SUPERFAMILY SSF56645 8 202 9.56E-36 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMIS_19180 f64f3866a13cc63c53f6ff12fc8a1eac 388 PIRSF PIRSF016578 1 388 9.9E-132 T 14-10-2018 AMIS_19180 f64f3866a13cc63c53f6ff12fc8a1eac 388 SUPERFAMILY SSF47203 220 371 1.92E-18 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMIS_19180 f64f3866a13cc63c53f6ff12fc8a1eac 388 Gene3D G3DSA:2.40.110.10 107 203 1.1E-35 T 14-10-2018 AMIS_19180 f64f3866a13cc63c53f6ff12fc8a1eac 388 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 9 80 1.0E-5 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMIS_19180 f64f3866a13cc63c53f6ff12fc8a1eac 388 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 234 366 2.9E-34 T 14-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain AMIS_19180 f64f3866a13cc63c53f6ff12fc8a1eac 388 Gene3D G3DSA:1.20.140.10 204 388 4.6E-50 T 14-10-2018 AMIS_16660 0f208ee3ac193620b2489c1e5668e364 316 Pfam PF00092 von Willebrand factor type A domain 89 274 2.9E-18 T 14-10-2018 IPR002035 von Willebrand factor, type A AMIS_16660 0f208ee3ac193620b2489c1e5668e364 316 SMART SM00327 86 277 3.4E-19 T 14-10-2018 IPR002035 von Willebrand factor, type A AMIS_16660 0f208ee3ac193620b2489c1e5668e364 316 Gene3D G3DSA:3.40.50.410 88 278 1.2E-39 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMIS_16660 0f208ee3ac193620b2489c1e5668e364 316 SUPERFAMILY SSF53300 86 277 1.08E-29 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMIS_57890 dc4675ca6b88d32cac43d4568b8bd96a 396 SUPERFAMILY SSF52540 6 220 6.18E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_57890 dc4675ca6b88d32cac43d4568b8bd96a 396 Gene3D G3DSA:2.40.30.10 209 302 6.4E-32 T 14-10-2018 AMIS_57890 dc4675ca6b88d32cac43d4568b8bd96a 396 PRINTS PR00315 GTP-binding elongation factor signature 96 107 1.2E-22 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_57890 dc4675ca6b88d32cac43d4568b8bd96a 396 PRINTS PR00315 GTP-binding elongation factor signature 133 142 1.2E-22 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_57890 dc4675ca6b88d32cac43d4568b8bd96a 396 PRINTS PR00315 GTP-binding elongation factor signature 60 68 1.2E-22 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_57890 dc4675ca6b88d32cac43d4568b8bd96a 396 PRINTS PR00315 GTP-binding elongation factor signature 80 90 1.2E-22 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_57890 dc4675ca6b88d32cac43d4568b8bd96a 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.2E-22 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_57890 dc4675ca6b88d32cac43d4568b8bd96a 396 Pfam PF03143 Elongation factor Tu C-terminal domain 301 394 7.1E-20 T 14-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AMIS_57890 dc4675ca6b88d32cac43d4568b8bd96a 396 SUPERFAMILY SSF50465 304 396 7.48E-25 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AMIS_57890 dc4675ca6b88d32cac43d4568b8bd96a 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 53.166 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AMIS_57890 dc4675ca6b88d32cac43d4568b8bd96a 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 53 68 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site AMIS_57890 dc4675ca6b88d32cac43d4568b8bd96a 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 395 4.8E-182 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AMIS_57890 dc4675ca6b88d32cac43d4568b8bd96a 396 Gene3D G3DSA:2.40.30.10 303 395 1.3E-29 T 14-10-2018 AMIS_57890 dc4675ca6b88d32cac43d4568b8bd96a 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 3.7E-56 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMIS_57890 dc4675ca6b88d32cac43d4568b8bd96a 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 9.5E-13 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AMIS_57890 dc4675ca6b88d32cac43d4568b8bd96a 396 SUPERFAMILY SSF50447 207 301 2.7E-24 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AMIS_57890 dc4675ca6b88d32cac43d4568b8bd96a 396 Gene3D G3DSA:3.40.50.300 1 205 3.1E-66 T 14-10-2018 AMIS_57890 dc4675ca6b88d32cac43d4568b8bd96a 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 147 3.6E-14 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AMIS_80350 10d0b7222fd0f38440f57d8155470fe7 557 Gene3D G3DSA:1.20.1730.10 12 535 2.4E-54 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily AMIS_80350 10d0b7222fd0f38440f57d8155470fe7 557 Pfam PF00474 Sodium:solute symporter family 46 481 2.5E-91 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AMIS_75610 cb12f824a084ec47202569784083a7fe 225 Gene3D G3DSA:3.40.50.150 20 225 2.1E-57 T 14-10-2018 AMIS_75610 cb12f824a084ec47202569784083a7fe 225 Pfam PF01596 O-methyltransferase 50 199 7.1E-22 T 14-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 AMIS_75610 cb12f824a084ec47202569784083a7fe 225 SUPERFAMILY SSF53335 40 224 1.25E-31 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_62230 1c1b6a285b264732f5ac78e2278159fa 357 Pfam PF01761 3-dehydroquinate synthase 65 321 1.7E-87 T 14-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AMIS_62230 1c1b6a285b264732f5ac78e2278159fa 357 SUPERFAMILY SSF56796 8 352 2.22E-91 T 14-10-2018 AMIS_62230 1c1b6a285b264732f5ac78e2278159fa 357 Gene3D G3DSA:1.20.1090.10 171 357 9.2E-65 T 14-10-2018 AMIS_62230 1c1b6a285b264732f5ac78e2278159fa 357 Gene3D G3DSA:3.40.50.1970 2 170 1.9E-48 T 14-10-2018 AMIS_62230 1c1b6a285b264732f5ac78e2278159fa 357 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 17 340 5.2E-97 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AMIS_62230 1c1b6a285b264732f5ac78e2278159fa 357 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 5 357 59.256 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AMIS_62230 1c1b6a285b264732f5ac78e2278159fa 357 PIRSF PIRSF001455 16 354 9.9E-90 T 14-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AMIS_81180 28efa74de3816c3c88d01c228eb444f7 373 SUPERFAMILY SSF109709 183 291 3.4E-34 T 14-10-2018 AMIS_81180 28efa74de3816c3c88d01c228eb444f7 373 Gene3D G3DSA:1.10.10.2830 178 292 3.2E-36 T 14-10-2018 AMIS_81180 28efa74de3816c3c88d01c228eb444f7 373 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 99 276 1.2E-61 T 14-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 AMIS_81180 28efa74de3816c3c88d01c228eb444f7 373 Pfam PF02195 ParB-like nuclease domain 102 191 5.5E-25 T 14-10-2018 IPR003115 ParB/Sulfiredoxin AMIS_81180 28efa74de3816c3c88d01c228eb444f7 373 SUPERFAMILY SSF110849 91 194 7.32E-30 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily AMIS_81180 28efa74de3816c3c88d01c228eb444f7 373 Gene3D G3DSA:3.90.1530.30 114 177 3.0E-26 T 14-10-2018 AMIS_81180 28efa74de3816c3c88d01c228eb444f7 373 SMART SM00470 101 191 8.3E-35 T 14-10-2018 IPR003115 ParB/Sulfiredoxin AMIS_25560 2767e3f3fc8828f1ecd2e2bbd97a9114 551 Pfam PF00501 AMP-binding enzyme 49 443 5.7E-77 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMIS_25560 2767e3f3fc8828f1ecd2e2bbd97a9114 551 SUPERFAMILY SSF56801 10 538 3.01E-131 T 14-10-2018 AMIS_25560 2767e3f3fc8828f1ecd2e2bbd97a9114 551 Gene3D G3DSA:3.40.50.12780 10 436 1.6E-114 T 14-10-2018 AMIS_25560 2767e3f3fc8828f1ecd2e2bbd97a9114 551 Pfam PF13193 AMP-binding enzyme C-terminal domain 452 529 1.8E-18 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AMIS_25560 2767e3f3fc8828f1ecd2e2bbd97a9114 551 Gene3D G3DSA:3.30.300.310 439 543 1.2E-22 T 14-10-2018 AMIS_63250 c6447276fec9f057eb6386bf1180b184 390 Gene3D G3DSA:3.40.50.2300 141 274 9.8E-75 T 14-10-2018 AMIS_63250 c6447276fec9f057eb6386bf1180b184 390 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 336 351 5.3E-8 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMIS_63250 c6447276fec9f057eb6386bf1180b184 390 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 44 60 5.3E-8 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMIS_63250 c6447276fec9f057eb6386bf1180b184 390 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 22 38 5.3E-8 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMIS_63250 c6447276fec9f057eb6386bf1180b184 390 Gene3D G3DSA:3.40.50.2300 24 352 9.8E-75 T 14-10-2018 AMIS_63250 c6447276fec9f057eb6386bf1180b184 390 SUPERFAMILY SSF53822 21 386 7.06E-74 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_63250 c6447276fec9f057eb6386bf1180b184 390 Pfam PF13458 Periplasmic binding protein 21 368 6.3E-60 T 14-10-2018 IPR028081 Leucine-binding protein domain AMIS_42960 2b0e1af2adc2ba47d84c5994a6f10633 397 Gene3D G3DSA:3.10.180.10 193 397 1.2E-77 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_42960 2b0e1af2adc2ba47d84c5994a6f10633 397 PIRSF PIRSF009283 29 397 7.0E-128 T 14-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 AMIS_42960 2b0e1af2adc2ba47d84c5994a6f10633 397 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 41 396 1.5E-126 T 14-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 AMIS_42960 2b0e1af2adc2ba47d84c5994a6f10633 397 SUPERFAMILY SSF54593 33 384 8.37E-93 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_42960 2b0e1af2adc2ba47d84c5994a6f10633 397 Gene3D G3DSA:3.10.180.10 27 192 7.7E-51 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_42960 2b0e1af2adc2ba47d84c5994a6f10633 397 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 45 145 2.2E-6 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMIS_42960 2b0e1af2adc2ba47d84c5994a6f10633 397 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 199 351 6.2E-15 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMIS_79380 cf28a5d1b6c1ab7a358768289afda77d 700 Pfam PF13191 AAA ATPase domain 35 113 2.6E-11 T 14-10-2018 AMIS_79380 cf28a5d1b6c1ab7a358768289afda77d 700 SUPERFAMILY SSF52540 26 234 4.95E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_79380 cf28a5d1b6c1ab7a358768289afda77d 700 Gene3D G3DSA:3.40.50.300 22 147 5.6E-10 T 14-10-2018 AMIS_56120 9f6da9e2e9772d2a35a1569cb07416ea 488 SUPERFAMILY SSF53720 7 483 2.09E-134 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMIS_56120 9f6da9e2e9772d2a35a1569cb07416ea 488 Pfam PF00171 Aldehyde dehydrogenase family 16 477 5.7E-138 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AMIS_56120 9f6da9e2e9772d2a35a1569cb07416ea 488 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 283 294 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AMIS_56120 9f6da9e2e9772d2a35a1569cb07416ea 488 Gene3D G3DSA:3.40.309.10 259 446 4.2E-142 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AMIS_56120 9f6da9e2e9772d2a35a1569cb07416ea 488 Gene3D G3DSA:3.40.605.10 23 463 4.2E-142 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AMIS_32830 c8d101752e1e8d6b37a1782e7184ea69 496 Gene3D G3DSA:3.30.300.30 393 495 1.4E-30 T 14-10-2018 AMIS_32830 c8d101752e1e8d6b37a1782e7184ea69 496 Pfam PF00501 AMP-binding enzyme 12 399 5.6E-103 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMIS_32830 c8d101752e1e8d6b37a1782e7184ea69 496 Pfam PF13193 AMP-binding enzyme C-terminal domain 409 483 2.0E-16 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AMIS_32830 c8d101752e1e8d6b37a1782e7184ea69 496 ProSitePatterns PS00455 Putative AMP-binding domain signature. 155 166 - T 14-10-2018 IPR020845 AMP-binding, conserved site AMIS_32830 c8d101752e1e8d6b37a1782e7184ea69 496 Gene3D G3DSA:3.40.50.12780 2 392 9.4E-118 T 14-10-2018 AMIS_32830 c8d101752e1e8d6b37a1782e7184ea69 496 SUPERFAMILY SSF56801 11 494 1.13E-147 T 14-10-2018 AMIS_35850 c0706b80dcdd46ba5ad30b2fc7a12a98 314 SUPERFAMILY SSF56112 17 264 2.55E-12 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMIS_35850 c0706b80dcdd46ba5ad30b2fc7a12a98 314 Pfam PF01636 Phosphotransferase enzyme family 63 239 3.8E-6 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase AMIS_70820 6cf0ec645a9b024fb25b675604465ee3 201 Pfam PF12028 Protein of unknown function (DUF3515) 18 190 9.5E-32 T 14-10-2018 IPR021903 Protein of unknown function DUF3515 AMIS_68970 51e6f7dd9b59a90dca16a11f49dc3d59 240 Gene3D G3DSA:3.20.20.190 2 238 6.7E-70 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 AMIS_68970 51e6f7dd9b59a90dca16a11f49dc3d59 240 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 7 232 3.1E-41 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 AMIS_68970 51e6f7dd9b59a90dca16a11f49dc3d59 240 SUPERFAMILY SSF51695 5 236 9.16E-68 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 AMIS_38440 f574fc3e62fc5696b2b8612028f6a5b7 231 SUPERFAMILY SSF46689 20 97 4.11E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_38440 f574fc3e62fc5696b2b8612028f6a5b7 231 Pfam PF00440 Bacterial regulatory proteins, tetR family 34 78 3.0E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_38440 f574fc3e62fc5696b2b8612028f6a5b7 231 SUPERFAMILY SSF48498 100 211 2.08E-15 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_38440 f574fc3e62fc5696b2b8612028f6a5b7 231 Gene3D G3DSA:1.10.357.10 17 221 6.9E-31 T 14-10-2018 AMIS_73110 b45aa77450581f9611cf545f60678b44 240 Gene3D G3DSA:2.10.10.20 196 239 2.6E-14 T 14-10-2018 AMIS_73110 b45aa77450581f9611cf545f60678b44 240 SUPERFAMILY SSF51055 197 239 3.27E-11 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AMIS_73110 b45aa77450581f9611cf545f60678b44 240 Gene3D G3DSA:2.60.120.200 107 189 1.0E-12 T 14-10-2018 AMIS_73110 b45aa77450581f9611cf545f60678b44 240 SUPERFAMILY SSF49899 30 189 1.66E-20 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily AMIS_73110 b45aa77450581f9611cf545f60678b44 240 Pfam PF00722 Glycosyl hydrolases family 16 127 173 1.1E-8 T 14-10-2018 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 AMIS_56560 8dd97312e58d54ec85b3bc274102372d 565 SUPERFAMILY SSF49785 336 562 4.89E-32 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_56560 8dd97312e58d54ec85b3bc274102372d 565 SMART SM00939 307 562 8.6E-31 T 14-10-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 AMIS_56560 8dd97312e58d54ec85b3bc274102372d 565 Gene3D G3DSA:2.60.120.260 340 563 1.0E-35 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_56560 8dd97312e58d54ec85b3bc274102372d 565 Gene3D G3DSA:3.40.50.1820 21 331 4.1E-62 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_56560 8dd97312e58d54ec85b3bc274102372d 565 Pfam PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain 321 554 2.2E-26 T 14-10-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 AMIS_56560 8dd97312e58d54ec85b3bc274102372d 565 TIGRFAM TIGR00976 /NonD: hydrolase CocE/NonD family protein 22 147 1.6E-47 T 14-10-2018 IPR005674 CocE/Serine esterase GO:0016787 AMIS_56560 8dd97312e58d54ec85b3bc274102372d 565 TIGRFAM TIGR00976 /NonD: hydrolase CocE/NonD family protein 236 537 7.1E-33 T 14-10-2018 IPR005674 CocE/Serine esterase GO:0016787 AMIS_56560 8dd97312e58d54ec85b3bc274102372d 565 Gene3D G3DSA:1.10.3020.10 152 230 4.1E-62 T 14-10-2018 AMIS_56560 8dd97312e58d54ec85b3bc274102372d 565 SUPERFAMILY SSF53474 20 326 5.56E-39 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_56560 8dd97312e58d54ec85b3bc274102372d 565 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 26 150 1.0E-40 T 14-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 AMIS_73460 db462b91941fc17efa1c539464a5698d 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 14-10-2018 IPR019844 Cold-shock conserved site AMIS_73460 db462b91941fc17efa1c539464a5698d 67 PRINTS PR00050 Cold shock protein signature 40 58 6.7E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMIS_73460 db462b91941fc17efa1c539464a5698d 67 PRINTS PR00050 Cold shock protein signature 4 19 6.7E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMIS_73460 db462b91941fc17efa1c539464a5698d 67 PRINTS PR00050 Cold shock protein signature 25 34 6.7E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMIS_73460 db462b91941fc17efa1c539464a5698d 67 Pfam PF00313 'Cold-shock' DNA-binding domain 2 66 5.0E-33 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMIS_73460 db462b91941fc17efa1c539464a5698d 67 SMART SM00357 3 67 1.5E-33 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 AMIS_73460 db462b91941fc17efa1c539464a5698d 67 Gene3D G3DSA:2.40.50.140 1 67 5.5E-32 T 14-10-2018 AMIS_73460 db462b91941fc17efa1c539464a5698d 67 PIRSF PIRSF002599 1 67 4.8E-26 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 AMIS_73460 db462b91941fc17efa1c539464a5698d 67 SUPERFAMILY SSF50249 1 65 4.29E-27 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMIS_80930 90ffb40afadf53e4aeeb6ff8173eaa90 258 SUPERFAMILY SSF51658 1 254 3.4E-59 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily AMIS_80930 90ffb40afadf53e4aeeb6ff8173eaa90 258 Gene3D G3DSA:3.20.20.150 1 256 3.8E-58 T 14-10-2018 AMIS_80930 90ffb40afadf53e4aeeb6ff8173eaa90 258 Pfam PF01261 Xylose isomerase-like TIM barrel 15 218 6.6E-28 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AMIS_80930 90ffb40afadf53e4aeeb6ff8173eaa90 258 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 162 169 - T 14-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 AMIS_80930 90ffb40afadf53e4aeeb6ff8173eaa90 258 SMART SM00518 2 256 2.7E-56 T 14-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 AMIS_69170 7281fdd8a844e5611854b08de0061f46 1516 SMART SM00487 22 239 2.4E-35 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMIS_69170 7281fdd8a844e5611854b08de0061f46 1516 Pfam PF00271 Helicase conserved C-terminal domain 283 407 9.1E-13 T 14-10-2018 IPR001650 Helicase, C-terminal AMIS_69170 7281fdd8a844e5611854b08de0061f46 1516 SMART SM00382 39 315 0.0033 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_69170 7281fdd8a844e5611854b08de0061f46 1516 Gene3D G3DSA:3.40.50.300 272 424 1.2E-25 T 14-10-2018 AMIS_69170 7281fdd8a844e5611854b08de0061f46 1516 SUPERFAMILY SSF52540 36 412 1.3E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_69170 7281fdd8a844e5611854b08de0061f46 1516 Pfam PF08494 DEAD/H associated 668 856 8.4E-74 T 14-10-2018 IPR013701 DEAD/H associated GO:0005524|GO:0016818 AMIS_69170 7281fdd8a844e5611854b08de0061f46 1516 Gene3D G3DSA:3.40.50.300 8 227 1.5E-56 T 14-10-2018 AMIS_69170 7281fdd8a844e5611854b08de0061f46 1516 Pfam PF00270 DEAD/DEAH box helicase 29 210 3.8E-24 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMIS_69170 7281fdd8a844e5611854b08de0061f46 1516 SMART SM00490 299 407 2.9E-13 T 14-10-2018 IPR001650 Helicase, C-terminal AMIS_59790 550ebccb5921c7bf19067d1195a320c6 88 SMART SM00530 20 74 4.0E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMIS_59790 550ebccb5921c7bf19067d1195a320c6 88 Pfam PF13560 Helix-turn-helix domain 16 76 1.7E-9 T 14-10-2018 AMIS_59790 550ebccb5921c7bf19067d1195a320c6 88 SUPERFAMILY SSF47413 9 76 7.11E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_59790 550ebccb5921c7bf19067d1195a320c6 88 Gene3D G3DSA:1.10.260.40 7 76 2.3E-25 T 14-10-2018 AMIS_6400 b1489b6ab460f1f19ffce4f094d3a20d 66 SUPERFAMILY SSF54285 1 66 6.54E-16 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AMIS_6400 b1489b6ab460f1f19ffce4f094d3a20d 66 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 66 1.0E-20 T 14-10-2018 IPR010035 ThiS, thiamine-biosynthesis AMIS_6400 b1489b6ab460f1f19ffce4f094d3a20d 66 Gene3D G3DSA:3.10.20.30 1 66 7.8E-24 T 14-10-2018 IPR012675 Beta-grasp domain superfamily AMIS_6400 b1489b6ab460f1f19ffce4f094d3a20d 66 Pfam PF02597 ThiS family 4 66 4.1E-14 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 AMIS_80810 3a8cb5b9f119a53ab159dccdf0ab2069 839 SUPERFAMILY SSF55073 387 538 5.34E-40 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_80810 3a8cb5b9f119a53ab159dccdf0ab2069 839 SUPERFAMILY SSF55781 243 380 4.66E-6 T 14-10-2018 AMIS_80810 3a8cb5b9f119a53ab159dccdf0ab2069 839 SUPERFAMILY SSF141868 556 801 7.32E-78 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_80810 3a8cb5b9f119a53ab159dccdf0ab2069 839 Pfam PF00990 Diguanylate cyclase, GGDEF domain 382 535 4.9E-42 T 14-10-2018 IPR000160 GGDEF domain AMIS_80810 3a8cb5b9f119a53ab159dccdf0ab2069 839 Gene3D G3DSA:3.20.20.450 551 806 3.3E-86 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_80810 3a8cb5b9f119a53ab159dccdf0ab2069 839 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 379 537 5.9E-36 T 14-10-2018 IPR000160 GGDEF domain AMIS_80810 3a8cb5b9f119a53ab159dccdf0ab2069 839 Pfam PF00563 EAL domain 557 790 6.3E-69 T 14-10-2018 IPR001633 EAL domain AMIS_80810 3a8cb5b9f119a53ab159dccdf0ab2069 839 SMART SM00052 550 795 5.8E-80 T 14-10-2018 IPR001633 EAL domain AMIS_80810 3a8cb5b9f119a53ab159dccdf0ab2069 839 Gene3D G3DSA:3.30.70.270 366 540 6.9E-48 T 14-10-2018 AMIS_80810 3a8cb5b9f119a53ab159dccdf0ab2069 839 SMART SM00267 371 540 2.9E-50 T 14-10-2018 IPR000160 GGDEF domain AMIS_9870 c2103be9210dfb54e67eb2620f58a027 222 Gene3D G3DSA:1.20.1260.10 67 220 2.9E-44 T 14-10-2018 IPR012347 Ferritin-like AMIS_9870 c2103be9210dfb54e67eb2620f58a027 222 Pfam PF03713 Domain of unknown function (DUF305) 78 219 1.2E-37 T 14-10-2018 IPR005183 Domain of unknown function DUF305 AMIS_52400 acad4128c59213f4852d91276b65fc0c 153 Gene3D G3DSA:2.30.30.40 10 132 1.9E-9 T 14-10-2018 AMIS_52400 acad4128c59213f4852d91276b65fc0c 153 Pfam PF01584 CheW-like domain 8 124 2.7E-16 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMIS_52400 acad4128c59213f4852d91276b65fc0c 153 Gene3D G3DSA:2.40.50.180 26 89 1.9E-9 T 14-10-2018 AMIS_52400 acad4128c59213f4852d91276b65fc0c 153 SUPERFAMILY SSF50341 5 131 1.57E-17 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 AMIS_52400 acad4128c59213f4852d91276b65fc0c 153 SMART SM00260 3 138 2.9E-5 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMIS_71540 e72460db665d530561f541bd8d87f40b 175 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 25 113 6.2E-9 T 14-10-2018 IPR000014 PAS domain AMIS_71540 e72460db665d530561f541bd8d87f40b 175 SUPERFAMILY SSF55785 21 115 1.03E-22 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_71540 e72460db665d530561f541bd8d87f40b 175 Gene3D G3DSA:3.30.450.20 20 118 6.3E-20 T 14-10-2018 AMIS_71540 e72460db665d530561f541bd8d87f40b 175 Pfam PF08447 PAS fold 32 113 2.0E-9 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 AMIS_35860 4d095d50a2da55a4137fd5d7f3403e54 556 SUPERFAMILY SSF89550 76 332 2.55E-14 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AMIS_35860 4d095d50a2da55a4137fd5d7f3403e54 556 SMART SM00481 78 154 2.5E-4 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal AMIS_15420 ab06fe02f53ad8c3b83164553299b6ea 358 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 220 229 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 AMIS_15420 ab06fe02f53ad8c3b83164553299b6ea 358 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 8 357 53.102 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 AMIS_15420 ab06fe02f53ad8c3b83164553299b6ea 358 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 10 356 8.0E-95 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 AMIS_15420 ab06fe02f53ad8c3b83164553299b6ea 358 Gene3D G3DSA:3.40.640.10 50 270 2.4E-121 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_15420 ab06fe02f53ad8c3b83164553299b6ea 358 SUPERFAMILY SSF53383 27 356 1.77E-71 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_15420 ab06fe02f53ad8c3b83164553299b6ea 358 Pfam PF00155 Aminotransferase class I and II 28 349 9.2E-55 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMIS_15420 ab06fe02f53ad8c3b83164553299b6ea 358 Gene3D G3DSA:3.90.1150.10 13 352 2.4E-121 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMIS_51690 9da827ee45694d5684bf61ec15e2215b 301 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 252 274 7.9E-51 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AMIS_51690 9da827ee45694d5684bf61ec15e2215b 301 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 107 129 7.9E-51 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AMIS_51690 9da827ee45694d5684bf61ec15e2215b 301 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 56 68 7.9E-51 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AMIS_51690 9da827ee45694d5684bf61ec15e2215b 301 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 274 299 7.9E-51 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AMIS_51690 9da827ee45694d5684bf61ec15e2215b 301 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 23 49 7.9E-51 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AMIS_51690 9da827ee45694d5684bf61ec15e2215b 301 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 129 156 7.9E-51 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AMIS_51690 9da827ee45694d5684bf61ec15e2215b 301 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 22 300 9.4E-108 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AMIS_51690 9da827ee45694d5684bf61ec15e2215b 301 Gene3D G3DSA:3.30.70.260 19 102 4.4E-19 T 14-10-2018 AMIS_51690 9da827ee45694d5684bf61ec15e2215b 301 SUPERFAMILY SSF55021 20 103 2.33E-11 T 14-10-2018 AMIS_51690 9da827ee45694d5684bf61ec15e2215b 301 SUPERFAMILY SSF53328 106 300 1.05E-57 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMIS_51690 9da827ee45694d5684bf61ec15e2215b 301 Pfam PF01842 ACT domain 22 83 2.2E-8 T 14-10-2018 IPR002912 ACT domain AMIS_51690 9da827ee45694d5684bf61ec15e2215b 301 PIRSF PIRSF036480 18 301 3.9E-102 T 14-10-2018 AMIS_51690 9da827ee45694d5684bf61ec15e2215b 301 Gene3D G3DSA:3.40.50.170 106 301 7.4E-67 T 14-10-2018 AMIS_51690 9da827ee45694d5684bf61ec15e2215b 301 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 18 300 41.673 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AMIS_51690 9da827ee45694d5684bf61ec15e2215b 301 Pfam PF00551 Formyl transferase 106 282 1.6E-38 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMIS_6790 2946411d731414b4e081147a069e3784 160 Pfam PF04073 Aminoacyl-tRNA editing domain 39 150 2.6E-20 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AMIS_6790 2946411d731414b4e081147a069e3784 160 PIRSF PIRSF006181 3 160 5.8E-46 T 14-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC AMIS_6790 2946411d731414b4e081147a069e3784 160 SUPERFAMILY SSF55826 8 158 9.29E-38 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 AMIS_6790 2946411d731414b4e081147a069e3784 160 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 8 158 4.0E-48 T 14-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC AMIS_6790 2946411d731414b4e081147a069e3784 160 Gene3D G3DSA:3.90.960.10 1 159 7.4E-49 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 AMIS_64670 ec5c34243198441fdc5f664eaa7819d0 618 Pfam PF00082 Subtilase family 139 388 2.2E-51 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AMIS_64670 ec5c34243198441fdc5f664eaa7819d0 618 Gene3D G3DSA:3.40.50.200 81 405 7.1E-98 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AMIS_64670 ec5c34243198441fdc5f664eaa7819d0 618 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 182 192 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site AMIS_64670 ec5c34243198441fdc5f664eaa7819d0 618 PRINTS PR00723 Subtilisin serine protease family (S8) signature 139 158 3.4E-22 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMIS_64670 ec5c34243198441fdc5f664eaa7819d0 618 PRINTS PR00723 Subtilisin serine protease family (S8) signature 178 191 3.4E-22 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMIS_64670 ec5c34243198441fdc5f664eaa7819d0 618 PRINTS PR00723 Subtilisin serine protease family (S8) signature 337 353 3.4E-22 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMIS_64670 ec5c34243198441fdc5f664eaa7819d0 618 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 144 155 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site AMIS_64670 ec5c34243198441fdc5f664eaa7819d0 618 SUPERFAMILY SSF52743 121 403 6.28E-89 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AMIS_64670 ec5c34243198441fdc5f664eaa7819d0 618 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 338 348 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site AMIS_3610 ceb7500ba6d12c5ba1e5b4acebc93590 472 Pfam PF12245 Bacterial Ig-like domain (group 3) 450 467 0.05 T 14-10-2018 IPR022038 Bacterial Ig-like domain AMIS_3610 ceb7500ba6d12c5ba1e5b4acebc93590 472 Pfam PF12245 Bacterial Ig-like domain (group 3) 187 203 3.2 T 14-10-2018 IPR022038 Bacterial Ig-like domain AMIS_3610 ceb7500ba6d12c5ba1e5b4acebc93590 472 Gene3D G3DSA:2.60.40.10 299 388 6.9E-7 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_3610 ceb7500ba6d12c5ba1e5b4acebc93590 472 Gene3D G3DSA:2.60.40.10 223 298 2.5E-5 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_3610 ceb7500ba6d12c5ba1e5b4acebc93590 472 Gene3D G3DSA:2.60.40.10 389 470 9.2E-15 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_71970 1dfffb7a6c82749c31231f31fc7c5bb0 76 Gene3D G3DSA:1.20.20.10 6 75 4.7E-18 T 14-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMIS_71970 1dfffb7a6c82749c31231f31fc7c5bb0 76 ProSitePatterns PS00605 ATP synthase c subunit signature. 38 59 - T 14-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMIS_71970 1dfffb7a6c82749c31231f31fc7c5bb0 76 Hamap MF_01396 ATP synthase subunit c [atpH]. 8 73 13.034 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMIS_71970 1dfffb7a6c82749c31231f31fc7c5bb0 76 SUPERFAMILY SSF81333 11 73 1.19E-14 T 14-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily AMIS_71970 1dfffb7a6c82749c31231f31fc7c5bb0 76 PRINTS PR00124 ATP synthase C subunit signature 31 46 6.9E-14 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMIS_71970 1dfffb7a6c82749c31231f31fc7c5bb0 76 PRINTS PR00124 ATP synthase C subunit signature 10 29 6.9E-14 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMIS_71970 1dfffb7a6c82749c31231f31fc7c5bb0 76 PRINTS PR00124 ATP synthase C subunit signature 48 73 6.9E-14 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMIS_71970 1dfffb7a6c82749c31231f31fc7c5bb0 76 Pfam PF00137 ATP synthase subunit C 11 71 2.8E-11 T 14-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 AMIS_70280 ed04589e969c6da3e475a1b956c7c8ef 215 Pfam PF04167 Protein of unknown function (DUF402) 81 150 1.3E-13 T 14-10-2018 IPR007295 Domain of unknown function DUF402 AMIS_70280 ed04589e969c6da3e475a1b956c7c8ef 215 Gene3D G3DSA:2.40.380.10 2 198 5.1E-58 T 14-10-2018 IPR035930 FomD-like superfamily AMIS_70280 ed04589e969c6da3e475a1b956c7c8ef 215 SUPERFAMILY SSF159234 63 200 2.22E-20 T 14-10-2018 IPR035930 FomD-like superfamily AMIS_72230 c6fbefafa8cb03b627acd9b56e94ca90 552 Hamap MF_00123 Arginine--tRNA ligase [argS]. 4 552 24.332 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AMIS_72230 c6fbefafa8cb03b627acd9b56e94ca90 552 PRINTS PR01038 Arginyl-tRNA synthetase signature 296 317 5.2E-21 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AMIS_72230 c6fbefafa8cb03b627acd9b56e94ca90 552 PRINTS PR01038 Arginyl-tRNA synthetase signature 122 137 5.2E-21 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AMIS_72230 c6fbefafa8cb03b627acd9b56e94ca90 552 PRINTS PR01038 Arginyl-tRNA synthetase signature 161 174 5.2E-21 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AMIS_72230 c6fbefafa8cb03b627acd9b56e94ca90 552 PRINTS PR01038 Arginyl-tRNA synthetase signature 137 153 5.2E-21 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AMIS_72230 c6fbefafa8cb03b627acd9b56e94ca90 552 Pfam PF05746 DALR anticodon binding domain 428 552 2.3E-29 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AMIS_72230 c6fbefafa8cb03b627acd9b56e94ca90 552 SMART SM00836 428 552 9.3E-44 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AMIS_72230 c6fbefafa8cb03b627acd9b56e94ca90 552 Gene3D G3DSA:1.10.730.10 423 552 6.0E-142 T 14-10-2018 AMIS_72230 c6fbefafa8cb03b627acd9b56e94ca90 552 SMART SM01016 4 93 4.0E-29 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AMIS_72230 c6fbefafa8cb03b627acd9b56e94ca90 552 SUPERFAMILY SSF52374 117 438 1.13E-77 T 14-10-2018 AMIS_72230 c6fbefafa8cb03b627acd9b56e94ca90 552 Pfam PF00750 tRNA synthetases class I (R) 259 390 4.2E-11 T 14-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 AMIS_72230 c6fbefafa8cb03b627acd9b56e94ca90 552 SUPERFAMILY SSF47323 423 552 2.16E-29 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMIS_72230 c6fbefafa8cb03b627acd9b56e94ca90 552 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 132 141 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMIS_72230 c6fbefafa8cb03b627acd9b56e94ca90 552 Gene3D G3DSA:3.40.50.620 122 422 6.0E-142 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMIS_72230 c6fbefafa8cb03b627acd9b56e94ca90 552 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 27 93 8.8E-20 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AMIS_72230 c6fbefafa8cb03b627acd9b56e94ca90 552 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 32 552 8.6E-113 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AMIS_72230 c6fbefafa8cb03b627acd9b56e94ca90 552 SUPERFAMILY SSF55190 21 113 1.19E-19 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 AMIS_72230 c6fbefafa8cb03b627acd9b56e94ca90 552 Gene3D G3DSA:3.30.1360.70 4 106 9.9E-20 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 AMIS_58510 a72d7c73ed83f95d0ebce64086f80727 473 PRINTS PR00173 Glutamate-aspartate symporter signature 151 173 3.7E-26 T 14-10-2018 AMIS_58510 a72d7c73ed83f95d0ebce64086f80727 473 PRINTS PR00173 Glutamate-aspartate symporter signature 82 107 3.7E-26 T 14-10-2018 AMIS_58510 a72d7c73ed83f95d0ebce64086f80727 473 PRINTS PR00173 Glutamate-aspartate symporter signature 198 217 3.7E-26 T 14-10-2018 AMIS_58510 a72d7c73ed83f95d0ebce64086f80727 473 PRINTS PR00173 Glutamate-aspartate symporter signature 15 35 3.7E-26 T 14-10-2018 AMIS_58510 a72d7c73ed83f95d0ebce64086f80727 473 PRINTS PR00173 Glutamate-aspartate symporter signature 334 353 3.7E-26 T 14-10-2018 AMIS_58510 a72d7c73ed83f95d0ebce64086f80727 473 PRINTS PR00173 Glutamate-aspartate symporter signature 299 325 3.7E-26 T 14-10-2018 AMIS_58510 a72d7c73ed83f95d0ebce64086f80727 473 Pfam PF00375 Sodium:dicarboxylate symporter family 18 406 9.4E-99 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AMIS_58510 a72d7c73ed83f95d0ebce64086f80727 473 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 302 325 - T 14-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site AMIS_58510 a72d7c73ed83f95d0ebce64086f80727 473 SUPERFAMILY SSF118215 17 408 9.68E-102 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AMIS_58510 a72d7c73ed83f95d0ebce64086f80727 473 Gene3D G3DSA:1.10.3860.10 8 421 3.6E-108 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AMIS_19250 6e78d5b5477f3a8aa46e09eadc454e9b 370 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 228 361 9.1E-13 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMIS_19250 6e78d5b5477f3a8aa46e09eadc454e9b 370 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 125 216 3.3E-18 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMIS_19250 6e78d5b5477f3a8aa46e09eadc454e9b 370 SUPERFAMILY SSF56645 3 240 8.12E-60 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMIS_19250 6e78d5b5477f3a8aa46e09eadc454e9b 370 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 11 120 1.4E-17 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMIS_19250 6e78d5b5477f3a8aa46e09eadc454e9b 370 SUPERFAMILY SSF47203 228 365 1.61E-14 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMIS_19250 6e78d5b5477f3a8aa46e09eadc454e9b 370 Gene3D G3DSA:2.40.110.10 124 232 7.8E-30 T 14-10-2018 AMIS_19250 6e78d5b5477f3a8aa46e09eadc454e9b 370 Gene3D G3DSA:1.10.540.10 2 119 4.8E-25 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMIS_19250 6e78d5b5477f3a8aa46e09eadc454e9b 370 Gene3D G3DSA:1.20.140.10 233 367 2.6E-23 T 14-10-2018 AMIS_23690 06a3943d23fbad11d8fb53cfa5a68a68 380 PIRSF PIRSF016578 1 378 1.3E-91 T 14-10-2018 AMIS_23690 06a3943d23fbad11d8fb53cfa5a68a68 380 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 229 359 1.3E-24 T 14-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain AMIS_23690 06a3943d23fbad11d8fb53cfa5a68a68 380 Gene3D G3DSA:1.20.140.10 208 376 2.5E-31 T 14-10-2018 AMIS_23690 06a3943d23fbad11d8fb53cfa5a68a68 380 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 11 87 1.5E-7 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMIS_23690 06a3943d23fbad11d8fb53cfa5a68a68 380 SUPERFAMILY SSF47203 222 374 4.03E-18 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMIS_23690 06a3943d23fbad11d8fb53cfa5a68a68 380 Gene3D G3DSA:2.40.110.10 111 204 1.5E-32 T 14-10-2018 AMIS_23690 06a3943d23fbad11d8fb53cfa5a68a68 380 Gene3D G3DSA:1.10.540.10 3 110 5.0E-28 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMIS_23690 06a3943d23fbad11d8fb53cfa5a68a68 380 SUPERFAMILY SSF56645 11 203 3.14E-31 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMIS_39510 e0821fd54d5715cfcfce5554d1f71f14 1203 Gene3D G3DSA:2.160.20.10 774 1117 3.3E-15 T 14-10-2018 IPR012334 Pectin lyase fold AMIS_39510 e0821fd54d5715cfcfce5554d1f71f14 1203 Gene3D G3DSA:2.60.40.10 1118 1203 5.6E-14 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_39510 e0821fd54d5715cfcfce5554d1f71f14 1203 SUPERFAMILY SSF51126 761 1073 1.14E-17 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor AMIS_39510 e0821fd54d5715cfcfce5554d1f71f14 1203 SUPERFAMILY SSF53474 68 254 1.3E-11 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_39510 e0821fd54d5715cfcfce5554d1f71f14 1203 Gene3D G3DSA:3.40.50.1820 60 422 4.2E-23 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_53150 d98a85536960d1b26948b6a76907b3b4 313 SUPERFAMILY SSF52540 5 226 2.46E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_53150 d98a85536960d1b26948b6a76907b3b4 313 SMART SM00382 30 221 7.8E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_53150 d98a85536960d1b26948b6a76907b3b4 313 TIGRFAM TIGR01188 drrA: daunorubicin resistance ABC transporter, ATP-binding protein 13 310 1.5E-100 T 14-10-2018 IPR005894 Daunorubicin resistance ABC transporter ATP-binding subunit DrrA GO:0005524|GO:0043215|GO:1900753 AMIS_53150 d98a85536960d1b26948b6a76907b3b4 313 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_53150 d98a85536960d1b26948b6a76907b3b4 313 Gene3D G3DSA:3.40.50.300 2 243 2.2E-62 T 14-10-2018 AMIS_53150 d98a85536960d1b26948b6a76907b3b4 313 Pfam PF00005 ABC transporter 21 164 1.9E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_23450 0f379c588771dd792d01407c453f34a0 83 Gene3D G3DSA:3.30.70.3090 1 82 5.2E-32 T 14-10-2018 AMIS_23450 0f379c588771dd792d01407c453f34a0 83 Pfam PF14026 Protein of unknown function (DUF4242) 4 79 4.8E-25 T 14-10-2018 IPR025336 Protein of unknown function DUF4242 AMIS_31410 edba7871cc9f09b8667c1bd36dcddca4 161 SUPERFAMILY SSF55729 4 144 8.21E-26 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_31410 edba7871cc9f09b8667c1bd36dcddca4 161 Gene3D G3DSA:3.40.630.30 2 157 1.2E-27 T 14-10-2018 AMIS_31410 edba7871cc9f09b8667c1bd36dcddca4 161 Pfam PF13302 Acetyltransferase (GNAT) domain 5 133 1.6E-19 T 14-10-2018 IPR000182 GNAT domain AMIS_70210 1608455696cf14ec2342650d52e345a9 220 ProSitePatterns PS00761 Signal peptidases I signature 3. 149 162 - T 14-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 AMIS_70210 1608455696cf14ec2342650d52e345a9 220 Pfam PF00717 Peptidase S24-like 40 116 6.9E-16 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AMIS_70210 1608455696cf14ec2342650d52e345a9 220 SUPERFAMILY SSF51306 32 205 1.18E-40 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily AMIS_70210 1608455696cf14ec2342650d52e345a9 220 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 144 163 2.6E-18 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AMIS_70210 1608455696cf14ec2342650d52e345a9 220 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 91 103 2.6E-18 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AMIS_70210 1608455696cf14ec2342650d52e345a9 220 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 34 50 2.6E-18 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AMIS_70210 1608455696cf14ec2342650d52e345a9 220 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 21 199 5.5E-38 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AMIS_50220 f818c39e6f475deb74dd278181b2b723 279 Pfam PF00535 Glycosyl transferase family 2 7 157 1.1E-15 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AMIS_50220 f818c39e6f475deb74dd278181b2b723 279 Gene3D G3DSA:3.90.550.10 2 207 2.1E-32 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_50220 f818c39e6f475deb74dd278181b2b723 279 SUPERFAMILY SSF53448 5 225 1.03E-37 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_69190 97f6be76b9f9541b9ad0919d98b35961 263 SUPERFAMILY SSF101852 169 259 1.1E-15 T 14-10-2018 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal AMIS_69190 97f6be76b9f9541b9ad0919d98b35961 263 Gene3D G3DSA:2.40.30.90 166 261 1.1E-17 T 14-10-2018 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal AMIS_69190 97f6be76b9f9541b9ad0919d98b35961 263 PIRSF PIRSF006779 4 261 6.1E-68 T 14-10-2018 IPR002747 SAM-dependent chlorinase/fluorinase AMIS_69190 97f6be76b9f9541b9ad0919d98b35961 263 Gene3D G3DSA:3.40.50.10790 3 163 7.7E-54 T 14-10-2018 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal AMIS_69190 97f6be76b9f9541b9ad0919d98b35961 263 Pfam PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase 7 257 5.3E-75 T 14-10-2018 IPR002747 SAM-dependent chlorinase/fluorinase AMIS_69190 97f6be76b9f9541b9ad0919d98b35961 263 SUPERFAMILY SSF102522 5 164 1.44E-52 T 14-10-2018 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal AMIS_80450 2cd6e895aae8fea3f9523ef57ca9ec14 130 SUPERFAMILY SSF55021 2 59 1.37E-10 T 14-10-2018 AMIS_80450 2cd6e895aae8fea3f9523ef57ca9ec14 130 Gene3D G3DSA:3.30.2130.10 1 129 6.2E-39 T 14-10-2018 AMIS_80450 2cd6e895aae8fea3f9523ef57ca9ec14 130 Pfam PF13840 ACT domain 60 122 1.0E-17 T 14-10-2018 IPR027795 CASTOR, ACT domain AMIS_80450 2cd6e895aae8fea3f9523ef57ca9ec14 130 SUPERFAMILY SSF55021 64 128 6.62E-15 T 14-10-2018 AMIS_80450 2cd6e895aae8fea3f9523ef57ca9ec14 130 PIRSF PIRSF008459 1 130 1.8E-21 T 14-10-2018 IPR016540 Uncharacterised conserved protein UCP008459 AMIS_30000 473239f4e8b11e042f7caefb9f7941a3 121 SUPERFAMILY SSF54909 28 110 6.56E-15 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel AMIS_30000 473239f4e8b11e042f7caefb9f7941a3 121 Pfam PF07045 Domain of unknown function (DUF1330) 29 111 1.3E-9 T 14-10-2018 IPR010753 Domain of unknown function DUF1330 AMIS_30000 473239f4e8b11e042f7caefb9f7941a3 121 Gene3D G3DSA:3.30.70.100 1 121 6.9E-37 T 14-10-2018 AMIS_42430 6797578eeb234f8484804bcd55a4ebb2 380 Pfam PF00155 Aminotransferase class I and II 103 376 7.2E-27 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMIS_42430 6797578eeb234f8484804bcd55a4ebb2 380 Gene3D G3DSA:3.90.1150.10 23 376 1.1E-106 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMIS_42430 6797578eeb234f8484804bcd55a4ebb2 380 SUPERFAMILY SSF53383 24 377 3.85E-69 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_42430 6797578eeb234f8484804bcd55a4ebb2 380 Gene3D G3DSA:3.40.640.10 61 279 1.1E-106 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_65860 e6a3dafb47d93d7e47fee2f11219e658 132 SUPERFAMILY SSF54427 29 130 1.15E-30 T 14-10-2018 IPR032710 NTF2-like domain superfamily AMIS_65860 e6a3dafb47d93d7e47fee2f11219e658 132 Gene3D G3DSA:3.10.450.50 3 131 1.0E-32 T 14-10-2018 AMIS_56150 8f218b8954f84622c4bf1533910c3989 274 PIRSF PIRSF000097 2 270 1.2E-80 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMIS_56150 8f218b8954f84622c4bf1533910c3989 274 Gene3D G3DSA:3.20.20.100 1 274 5.6E-112 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMIS_56150 8f218b8954f84622c4bf1533910c3989 274 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 229 244 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AMIS_56150 8f218b8954f84622c4bf1533910c3989 274 Pfam PF00248 Aldo/keto reductase family 24 261 6.5E-47 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain AMIS_56150 8f218b8954f84622c4bf1533910c3989 274 PRINTS PR00069 Aldo-keto reductase signature 37 61 1.1E-44 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMIS_56150 8f218b8954f84622c4bf1533910c3989 274 PRINTS PR00069 Aldo-keto reductase signature 159 188 1.1E-44 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMIS_56150 8f218b8954f84622c4bf1533910c3989 274 PRINTS PR00069 Aldo-keto reductase signature 125 142 1.1E-44 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMIS_56150 8f218b8954f84622c4bf1533910c3989 274 PRINTS PR00069 Aldo-keto reductase signature 93 111 1.1E-44 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMIS_56150 8f218b8954f84622c4bf1533910c3989 274 PRINTS PR00069 Aldo-keto reductase signature 196 220 1.1E-44 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMIS_56150 8f218b8954f84622c4bf1533910c3989 274 SUPERFAMILY SSF51430 7 265 1.57E-93 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMIS_56150 8f218b8954f84622c4bf1533910c3989 274 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 41 58 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AMIS_56150 8f218b8954f84622c4bf1533910c3989 274 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 125 142 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AMIS_18490 98824d9d38d62600e47e27c2891d5b5e 235 Gene3D G3DSA:2.60.40.2230 24 187 9.0E-56 T 14-10-2018 IPR038507 YcnI-like superfamily AMIS_18490 98824d9d38d62600e47e27c2891d5b5e 235 Pfam PF07987 Domain of unkown function (DUF1775) 27 174 9.7E-52 T 14-10-2018 IPR012533 YcnI-like AMIS_33570 a6d772ed2b79fd686b7df1fcc8274235 377 SUPERFAMILY SSF103481 195 297 8.37E-10 T 14-10-2018 AMIS_33570 a6d772ed2b79fd686b7df1fcc8274235 377 Pfam PF00892 EamA-like transporter family 15 144 9.1E-11 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMIS_33570 a6d772ed2b79fd686b7df1fcc8274235 377 Pfam PF00892 EamA-like transporter family 160 290 1.2E-11 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMIS_63300 74d2d180fed210d4c3671a1e1f9f53a2 313 SUPERFAMILY SSF49899 120 307 1.43E-14 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily AMIS_63300 74d2d180fed210d4c3671a1e1f9f53a2 313 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 178 303 4.2E-9 T 14-10-2018 AMIS_63300 74d2d180fed210d4c3671a1e1f9f53a2 313 Gene3D G3DSA:2.60.120.200 113 312 1.1E-12 T 14-10-2018 AMIS_39010 4089468bfe9f745c236e84f318439f93 385 Gene3D G3DSA:3.40.50.720 177 336 1.5E-113 T 14-10-2018 AMIS_39010 4089468bfe9f745c236e84f318439f93 385 Pfam PF00107 Zinc-binding dehydrogenase 196 275 7.5E-11 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMIS_39010 4089468bfe9f745c236e84f318439f93 385 SUPERFAMILY SSF50129 2 188 1.02E-52 T 14-10-2018 IPR011032 GroES-like superfamily AMIS_39010 4089468bfe9f745c236e84f318439f93 385 SUPERFAMILY SSF51735 164 346 2.12E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_39010 4089468bfe9f745c236e84f318439f93 385 Gene3D G3DSA:3.90.180.10 10 371 1.5E-113 T 14-10-2018 AMIS_39010 4089468bfe9f745c236e84f318439f93 385 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 145 4.7E-23 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMIS_39010 4089468bfe9f745c236e84f318439f93 385 SMART SM00829 8 374 0.0072 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMIS_16330 1f6723949b8233a8e9a1586256c62940 244 TIGRFAM TIGR03083 TIGR03083: uncharacterized Actinobacterial protein TIGR03083 17 218 1.4E-22 T 14-10-2018 IPR017517 Conserved hypothetical protein CHP03083, actinobacterial-type AMIS_16330 1f6723949b8233a8e9a1586256c62940 244 SUPERFAMILY SSF109854 15 138 7.78E-14 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes AMIS_16330 1f6723949b8233a8e9a1586256c62940 244 Pfam PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain 20 132 2.8E-18 T 14-10-2018 IPR024344 Mycothiol-dependent maleylpyruvate isomerase, metal-binding domain GO:0046872 AMIS_16330 1f6723949b8233a8e9a1586256c62940 244 Pfam PF07398 MDMPI C-terminal domain 146 235 2.4E-13 T 14-10-2018 IPR010872 MDMPI C-terminal AMIS_16330 1f6723949b8233a8e9a1586256c62940 244 Gene3D G3DSA:1.20.120.450 4 135 3.0E-7 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes AMIS_43730 c288efb66c65600a6cf0302a3abbadea 799 SUPERFAMILY SSF48208 101 377 6.8E-10 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AMIS_43730 c288efb66c65600a6cf0302a3abbadea 799 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 650 795 3.5E-13 T 14-10-2018 AMIS_43730 c288efb66c65600a6cf0302a3abbadea 799 Gene3D G3DSA:2.60.120.200 650 796 1.8E-10 T 14-10-2018 AMIS_43730 c288efb66c65600a6cf0302a3abbadea 799 Pfam PF07944 Beta-L-arabinofuranosidase, GH127 45 550 3.7E-147 T 14-10-2018 IPR012878 Beta-L-arabinofuranosidase, GH127 AMIS_43730 c288efb66c65600a6cf0302a3abbadea 799 SUPERFAMILY SSF49899 638 795 2.59E-14 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily AMIS_14140 879d4867ff7f58f349fda6807f8d0b5f 379 Gene3D G3DSA:3.40.640.10 23 255 8.1E-85 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_14140 879d4867ff7f58f349fda6807f8d0b5f 379 Pfam PF00266 Aminotransferase class-V 12 362 1.3E-40 T 14-10-2018 IPR000192 Aminotransferase class V domain AMIS_14140 879d4867ff7f58f349fda6807f8d0b5f 379 Gene3D G3DSA:3.90.1150.10 13 364 8.1E-85 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMIS_14140 879d4867ff7f58f349fda6807f8d0b5f 379 PIRSF PIRSF005572 9 377 8.9E-96 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 AMIS_14140 879d4867ff7f58f349fda6807f8d0b5f 379 SUPERFAMILY SSF53383 11 370 1.63E-71 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_47630 e8810383ddb5de22c195835845e692ff 450 SUPERFAMILY SSF102114 141 404 2.47E-13 T 14-10-2018 AMIS_47630 e8810383ddb5de22c195835845e692ff 450 Gene3D G3DSA:3.20.20.70 73 390 1.3E-73 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_53820 debc6efdfcfcbd1b24ad52015aa4cf89 263 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 5.1E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_53820 debc6efdfcfcbd1b24ad52015aa4cf89 263 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 5.1E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_53820 debc6efdfcfcbd1b24ad52015aa4cf89 263 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 74 3.0E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_53820 debc6efdfcfcbd1b24ad52015aa4cf89 263 Gene3D G3DSA:3.40.1410.10 77 242 1.8E-27 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AMIS_53820 debc6efdfcfcbd1b24ad52015aa4cf89 263 SMART SM00866 98 240 7.4E-17 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AMIS_53820 debc6efdfcfcbd1b24ad52015aa4cf89 263 SUPERFAMILY SSF64288 62 246 1.3E-28 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AMIS_53820 debc6efdfcfcbd1b24ad52015aa4cf89 263 SMART SM00345 15 74 4.8E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_53820 debc6efdfcfcbd1b24ad52015aa4cf89 263 SUPERFAMILY SSF46785 8 78 5.34E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_53820 debc6efdfcfcbd1b24ad52015aa4cf89 263 Gene3D G3DSA:1.10.10.10 7 76 2.3E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_53820 debc6efdfcfcbd1b24ad52015aa4cf89 263 Pfam PF07702 UTRA domain 102 236 1.3E-23 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AMIS_5980 2db5858f44b9b0e6f8ce1ac1845325fd 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 2.5E-57 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_5980 2db5858f44b9b0e6f8ce1ac1845325fd 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 2.5E-57 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_5980 2db5858f44b9b0e6f8ce1ac1845325fd 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 2.5E-57 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_5980 2db5858f44b9b0e6f8ce1ac1845325fd 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 2.5E-57 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_5980 2db5858f44b9b0e6f8ce1ac1845325fd 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 2.5E-57 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_5980 2db5858f44b9b0e6f8ce1ac1845325fd 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 2.5E-57 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_5980 2db5858f44b9b0e6f8ce1ac1845325fd 124 PIRSF PIRSF002133 1 124 1.2E-53 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_5980 2db5858f44b9b0e6f8ce1ac1845325fd 124 Gene3D G3DSA:2.40.50.140 1 124 1.2E-61 T 14-10-2018 AMIS_5980 2db5858f44b9b0e6f8ce1ac1845325fd 124 Pfam PF00164 Ribosomal protein S12/S23 12 123 1.9E-42 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_5980 2db5858f44b9b0e6f8ce1ac1845325fd 124 SUPERFAMILY SSF50249 2 123 4.8E-52 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMIS_5980 2db5858f44b9b0e6f8ce1ac1845325fd 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_5980 2db5858f44b9b0e6f8ce1ac1845325fd 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 39.821 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_5980 2db5858f44b9b0e6f8ce1ac1845325fd 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 2 123 1.1E-66 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_75710 e95a5f22229d00ab588fe7750e5389f3 617 SUPERFAMILY SSF53323 16 227 1.27E-16 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 AMIS_75710 e95a5f22229d00ab588fe7750e5389f3 617 Gene3D G3DSA:3.40.920.10 12 223 2.3E-13 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 AMIS_75710 e95a5f22229d00ab588fe7750e5389f3 617 SUPERFAMILY SSF52922 513 615 2.67E-14 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AMIS_75710 e95a5f22229d00ab588fe7750e5389f3 617 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 261 476 6.6E-53 T 14-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 AMIS_75710 e95a5f22229d00ab588fe7750e5389f3 617 SUPERFAMILY SSF52518 234 496 7.15E-63 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold AMIS_75710 e95a5f22229d00ab588fe7750e5389f3 617 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 22 210 1.0E-23 T 14-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 AMIS_75710 e95a5f22229d00ab588fe7750e5389f3 617 Gene3D G3DSA:3.40.50.970 224 425 2.6E-66 T 14-10-2018 AMIS_75710 e95a5f22229d00ab588fe7750e5389f3 617 Gene3D G3DSA:3.40.50.920 510 616 2.7E-19 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AMIS_75710 e95a5f22229d00ab588fe7750e5389f3 617 TIGRFAM TIGR03710 OAFO_sf: 2-oxoacid:acceptor oxidoreductase, alpha subunit 14 607 1.7E-197 T 14-10-2018 IPR022367 2-oxoacid:acceptor oxidoreductase, alpha subunit KEGG: 00020+1.2.7.3|KEGG: 00720+1.2.7.3|MetaCyc: PWY-5392|MetaCyc: PWY-6969 AMIS_67900 3c21f8ca619f6ecada1de883392bc155 227 Pfam PF04542 Sigma-70 region 2 67 136 5.1E-15 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_67900 3c21f8ca619f6ecada1de883392bc155 227 Gene3D G3DSA:1.10.1740.10 55 133 1.9E-16 T 14-10-2018 AMIS_67900 3c21f8ca619f6ecada1de883392bc155 227 SUPERFAMILY SSF88659 159 221 5.05E-12 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_67900 3c21f8ca619f6ecada1de883392bc155 227 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 65 220 9.3E-23 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_67900 3c21f8ca619f6ecada1de883392bc155 227 SUPERFAMILY SSF88946 64 149 5.49E-18 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_67900 3c21f8ca619f6ecada1de883392bc155 227 Gene3D G3DSA:1.10.10.10 155 227 4.6E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_67900 3c21f8ca619f6ecada1de883392bc155 227 Pfam PF04545 Sigma-70, region 4 169 217 6.8E-10 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 AMIS_78470 6194719c4b396cbbf1840ca309451e34 333 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 132 331 7.5E-36 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_78470 6194719c4b396cbbf1840ca309451e34 333 Gene3D G3DSA:1.10.3720.10 103 325 5.1E-19 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_78470 6194719c4b396cbbf1840ca309451e34 333 SUPERFAMILY SSF161098 108 319 2.83E-15 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_60850 cea3471f60364b1631c7d3c75f7a1f1f 388 SUPERFAMILY SSF52038 292 362 4.58E-13 T 14-10-2018 IPR035905 Barstar-like superfamily AMIS_60850 cea3471f60364b1631c7d3c75f7a1f1f 388 Pfam PF01337 Barstar (barnase inhibitor) 294 371 1.7E-15 T 14-10-2018 IPR000468 Barstar (barnase inhibitor) AMIS_70650 3ef683c457c50d0eaaaa432a5aaef209 395 Pfam PF04188 Mannosyltransferase (PIG-V) 56 189 1.7E-6 T 14-10-2018 IPR007315 GPI mannosyltransferase 2 GO:0004584|GO:0006506 Reactome: R-HSA-162710 AMIS_39120 d6f51fcf21707dd8954c5f131ee968f7 315 TIGRFAM TIGR04382 myo_inos_iolC_N: 5-dehydro-2-deoxygluconokinase 5 311 5.1E-112 T 14-10-2018 IPR030830 5-Dehydro-2-deoxygluconokinase KEGG: 00562+2.7.1.92 AMIS_39120 d6f51fcf21707dd8954c5f131ee968f7 315 SUPERFAMILY SSF53613 5 312 2.18E-76 T 14-10-2018 IPR029056 Ribokinase-like AMIS_39120 d6f51fcf21707dd8954c5f131ee968f7 315 Pfam PF00294 pfkB family carbohydrate kinase 5 304 6.6E-55 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB AMIS_39120 d6f51fcf21707dd8954c5f131ee968f7 315 Gene3D G3DSA:3.40.1190.20 7 294 1.0E-98 T 14-10-2018 IPR029056 Ribokinase-like AMIS_39120 d6f51fcf21707dd8954c5f131ee968f7 315 Gene3D G3DSA:2.20.150.10 12 107 1.0E-98 T 14-10-2018 IPR023314 5-Dehydro-2-deoxygluconokinase-like superfamily KEGG: 00562+2.7.1.92 AMIS_42670 a96045be8250810c8fda36d4898f85ae 211 Gene3D G3DSA:3.40.1080.10 2 209 7.2E-74 T 14-10-2018 AMIS_42670 a96045be8250810c8fda36d4898f85ae 211 Pfam PF01144 Coenzyme A transferase 8 185 1.2E-27 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 AMIS_42670 a96045be8250810c8fda36d4898f85ae 211 SMART SM00882 7 203 1.8E-55 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 AMIS_42670 a96045be8250810c8fda36d4898f85ae 211 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 5 207 5.6E-78 T 14-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 AMIS_42670 a96045be8250810c8fda36d4898f85ae 211 SUPERFAMILY SSF100950 7 206 3.06E-56 T 14-10-2018 IPR037171 NagB/RpiA transferase-like AMIS_51090 8ec5cd97491374d0391b7a17b00fc631 346 TIGRFAM TIGR03858 LLM_2I7G: probable oxidoreductase, LLM family 8 341 5.9E-151 T 14-10-2018 IPR022290 Conserved hypothetical protein CHP03858, luciferase-like monooxygenase, putative AMIS_51090 8ec5cd97491374d0391b7a17b00fc631 346 Gene3D G3DSA:3.20.20.30 4 345 1.3E-81 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_51090 8ec5cd97491374d0391b7a17b00fc631 346 SUPERFAMILY SSF51679 9 342 3.01E-75 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_51090 8ec5cd97491374d0391b7a17b00fc631 346 Pfam PF00296 Luciferase-like monooxygenase 18 309 1.8E-47 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMIS_56610 a0e67353b23bf6ef963ac240339c6b84 288 Gene3D G3DSA:1.10.3720.10 76 282 3.7E-21 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_56610 a0e67353b23bf6ef963ac240339c6b84 288 SUPERFAMILY SSF161098 81 271 1.57E-23 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_56610 a0e67353b23bf6ef963ac240339c6b84 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 104 280 5.6E-27 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_64170 aa97ca7324b8ebbefd91898206a36dab 130 Pfam PF13581 Histidine kinase-like ATPase domain 8 118 6.3E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_64170 aa97ca7324b8ebbefd91898206a36dab 130 Gene3D G3DSA:3.30.565.10 1 129 8.2E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_64170 aa97ca7324b8ebbefd91898206a36dab 130 SUPERFAMILY SSF55874 33 125 7.99E-12 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_13180 f4fb8b04109b80e3770ac5ebfa60c10e 134 Gene3D G3DSA:2.60.120.460 1 132 6.6E-28 T 14-10-2018 IPR035917 YjbQ-like superfamily AMIS_13180 f4fb8b04109b80e3770ac5ebfa60c10e 134 Pfam PF01894 Uncharacterised protein family UPF0047 18 128 3.5E-21 T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 AMIS_13180 f4fb8b04109b80e3770ac5ebfa60c10e 134 SUPERFAMILY SSF111038 3 130 4.97E-30 T 14-10-2018 IPR035917 YjbQ-like superfamily AMIS_15660 916be870bcfc03a96d764243df6e23b1 413 Gene3D G3DSA:3.40.50.1100 14 209 3.5E-177 T 14-10-2018 AMIS_15660 916be870bcfc03a96d764243df6e23b1 413 SUPERFAMILY SSF53686 7 395 7.46E-143 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMIS_15660 916be870bcfc03a96d764243df6e23b1 413 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 60 385 9.0E-45 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AMIS_15660 916be870bcfc03a96d764243df6e23b1 413 PIRSF PIRSF001413 1 400 4.1E-152 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AMIS_15660 916be870bcfc03a96d764243df6e23b1 413 Gene3D G3DSA:3.40.50.1100 58 391 3.5E-177 T 14-10-2018 AMIS_15660 916be870bcfc03a96d764243df6e23b1 413 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 11 394 7.3E-179 T 14-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AMIS_15660 916be870bcfc03a96d764243df6e23b1 413 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 6 398 50.42 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AMIS_23010 23c5b45e2b40a1f9252e70cbf2c31dc9 296 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 50 234 1.0E-16 T 14-10-2018 IPR018713 Domain of unknown function DUF2236 AMIS_50350 f33cf9414b98bc62458678ef30485c08 593 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 6 240 5.3E-63 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AMIS_50350 f33cf9414b98bc62458678ef30485c08 593 SMART SM00825 Beta-ketoacyl synthase 7 420 5.5E-127 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMIS_50350 f33cf9414b98bc62458678ef30485c08 593 Gene3D G3DSA:3.30.70.3290 431 575 2.6E-25 T 14-10-2018 AMIS_50350 f33cf9414b98bc62458678ef30485c08 593 SUPERFAMILY SSF53901 3 414 2.96E-75 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_50350 f33cf9414b98bc62458678ef30485c08 593 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site AMIS_50350 f33cf9414b98bc62458678ef30485c08 593 Gene3D G3DSA:3.40.47.10 1 430 2.2E-145 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_50350 f33cf9414b98bc62458678ef30485c08 593 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 250 367 2.1E-29 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal AMIS_50350 f33cf9414b98bc62458678ef30485c08 593 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 370 483 1.9E-13 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AMIS_8110 a2a9e96ea7e9db7dc74d5016f5f61cae 195 SUPERFAMILY SSF52980 21 171 5.36E-17 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AMIS_8110 a2a9e96ea7e9db7dc74d5016f5f61cae 195 Pfam PF05685 Putative restriction endonuclease 27 184 6.6E-20 T 14-10-2018 IPR008538 Domain of unknown function DUF820 AMIS_8110 a2a9e96ea7e9db7dc74d5016f5f61cae 195 Gene3D G3DSA:3.90.1570.10 17 186 4.6E-15 T 14-10-2018 AMIS_32310 adb94689945ecd84569acfe26ca970b0 192 Pfam PF04264 YceI-like domain 16 181 2.4E-41 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AMIS_32310 adb94689945ecd84569acfe26ca970b0 192 SMART SM00867 15 182 1.1E-64 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AMIS_32310 adb94689945ecd84569acfe26ca970b0 192 Gene3D G3DSA:2.40.128.110 15 188 2.3E-48 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily AMIS_32310 adb94689945ecd84569acfe26ca970b0 192 SUPERFAMILY SSF101874 14 182 1.01E-51 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily AMIS_1610 805d720739813e36facce597ff17fa63 268 Pfam PF03734 L,D-transpeptidase catalytic domain 149 265 2.4E-13 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 AMIS_1610 805d720739813e36facce597ff17fa63 268 Pfam PF01471 Putative peptidoglycan binding domain 80 135 1.3E-14 T 14-10-2018 IPR002477 Peptidoglycan binding-like AMIS_1610 805d720739813e36facce597ff17fa63 268 SUPERFAMILY SSF47090 70 135 5.23E-18 T 14-10-2018 IPR036365 PGBD-like superfamily AMIS_1610 805d720739813e36facce597ff17fa63 268 Gene3D G3DSA:2.40.440.10 142 268 1.6E-31 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like AMIS_1610 805d720739813e36facce597ff17fa63 268 SUPERFAMILY SSF141523 147 267 3.14E-16 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like AMIS_1610 805d720739813e36facce597ff17fa63 268 Gene3D G3DSA:1.10.101.10 62 141 4.2E-23 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 AMIS_28800 b2a2b69014f66ea27ee218bb78ffcdef 188 Gene3D G3DSA:3.90.1720.10 32 188 2.3E-36 T 14-10-2018 AMIS_28800 b2a2b69014f66ea27ee218bb78ffcdef 188 Pfam PF00877 NlpC/P60 family 86 183 4.7E-22 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain AMIS_28800 b2a2b69014f66ea27ee218bb78ffcdef 188 SUPERFAMILY SSF54001 69 179 1.23E-29 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily AMIS_19290 0694db691c9a7d7eba625f2a0307a3d7 275 Gene3D G3DSA:3.40.50.720 19 271 3.1E-79 T 14-10-2018 AMIS_19290 0694db691c9a7d7eba625f2a0307a3d7 275 SUPERFAMILY SSF51735 30 271 3.59E-73 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_19290 0694db691c9a7d7eba625f2a0307a3d7 275 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 170 198 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMIS_19290 0694db691c9a7d7eba625f2a0307a3d7 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 109 120 1.6E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_19290 0694db691c9a7d7eba625f2a0307a3d7 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 171 1.6E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_19290 0694db691c9a7d7eba625f2a0307a3d7 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 183 202 1.6E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_19290 0694db691c9a7d7eba625f2a0307a3d7 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 173 1.4E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_19290 0694db691c9a7d7eba625f2a0307a3d7 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 109 120 1.4E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_19290 0694db691c9a7d7eba625f2a0307a3d7 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 34 51 1.4E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_19290 0694db691c9a7d7eba625f2a0307a3d7 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 221 1.4E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_19290 0694db691c9a7d7eba625f2a0307a3d7 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 238 258 1.4E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_19290 0694db691c9a7d7eba625f2a0307a3d7 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 202 1.4E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_19290 0694db691c9a7d7eba625f2a0307a3d7 275 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 39 270 7.7E-62 T 14-10-2018 AMIS_2530 ec2b431943191b28235765f57e5a147f 377 Pfam PF06152 Phage minor capsid protein 2 4 355 2.4E-81 T 14-10-2018 IPR009319 Bacteriophage A118, Gp4, minor capsid GO:0005198 AMIS_22570 d4afd72de657b19cf50564fa9bea11de 213 TIGRFAM TIGR02150 IPP_isom_1: isopentenyl-diphosphate delta-isomerase 26 182 1.5E-45 T 14-10-2018 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: R-HSA-191273 AMIS_22570 d4afd72de657b19cf50564fa9bea11de 213 Pfam PF00293 NUDIX domain 51 173 3.0E-18 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMIS_22570 d4afd72de657b19cf50564fa9bea11de 213 Hamap MF_00202 Isopentenyl-diphosphate Delta-isomerase [idi]. 24 194 32.22 T 14-10-2018 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: R-HSA-191273 AMIS_22570 d4afd72de657b19cf50564fa9bea11de 213 Gene3D G3DSA:3.90.79.10 22 191 5.6E-50 T 14-10-2018 AMIS_22570 d4afd72de657b19cf50564fa9bea11de 213 PIRSF PIRSF018427 10 208 7.9E-55 T 14-10-2018 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: R-HSA-191273 AMIS_22570 d4afd72de657b19cf50564fa9bea11de 213 SUPERFAMILY SSF55811 24 186 5.69E-44 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMIS_130 b7e531536d77d5cf3273800ee04a3447 164 SUPERFAMILY SSF55811 2 105 9.07E-25 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMIS_130 b7e531536d77d5cf3273800ee04a3447 164 PRINTS PR00502 NUDIX hydrolase family signature 38 53 1.7E-8 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AMIS_130 b7e531536d77d5cf3273800ee04a3447 164 PRINTS PR00502 NUDIX hydrolase family signature 24 38 1.7E-8 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AMIS_130 b7e531536d77d5cf3273800ee04a3447 164 Gene3D G3DSA:3.90.79.10 1 111 2.6E-24 T 14-10-2018 AMIS_130 b7e531536d77d5cf3273800ee04a3447 164 Pfam PF00293 NUDIX domain 4 106 6.1E-17 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMIS_130 b7e531536d77d5cf3273800ee04a3447 164 ProSitePatterns PS00893 Nudix box signature. 29 50 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMIS_68320 beaff945f9ced3e2b23728d55c3f7835 334 SUPERFAMILY SSF81995 23 86 3.4E-5 T 14-10-2018 AMIS_68320 beaff945f9ced3e2b23728d55c3f7835 334 SUPERFAMILY SSF50494 146 329 3.48E-36 T 14-10-2018 IPR009003 Peptidase S1, PA clan AMIS_68320 beaff945f9ced3e2b23728d55c3f7835 334 Gene3D G3DSA:2.40.10.120 138 331 2.3E-41 T 14-10-2018 AMIS_68320 beaff945f9ced3e2b23728d55c3f7835 334 PRINTS PR00834 HtrA/DegQ protease family signature 181 193 3.4E-14 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMIS_68320 beaff945f9ced3e2b23728d55c3f7835 334 PRINTS PR00834 HtrA/DegQ protease family signature 206 226 3.4E-14 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMIS_68320 beaff945f9ced3e2b23728d55c3f7835 334 PRINTS PR00834 HtrA/DegQ protease family signature 297 314 3.4E-14 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMIS_68320 beaff945f9ced3e2b23728d55c3f7835 334 PRINTS PR00834 HtrA/DegQ protease family signature 244 268 3.4E-14 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMIS_68320 beaff945f9ced3e2b23728d55c3f7835 334 Pfam PF13365 Trypsin-like peptidase domain 168 304 6.6E-22 T 14-10-2018 AMIS_29140 ee52bb9fb9d8f5f2f071607f9e64a61f 243 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_29140 ee52bb9fb9d8f5f2f071607f9e64a61f 243 SUPERFAMILY SSF52540 9 224 5.99E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_29140 ee52bb9fb9d8f5f2f071607f9e64a61f 243 Pfam PF00005 ABC transporter 25 171 2.5E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_29140 ee52bb9fb9d8f5f2f071607f9e64a61f 243 SMART SM00382 34 220 1.1E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_29140 ee52bb9fb9d8f5f2f071607f9e64a61f 243 Gene3D G3DSA:3.40.50.300 6 242 2.4E-68 T 14-10-2018 AMIS_5140 c55b230068acc5893ea5cea60ba0f615 123 SUPERFAMILY SSF48452 7 113 2.32E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_5140 c55b230068acc5893ea5cea60ba0f615 123 Pfam PF14559 Tetratricopeptide repeat 14 78 1.0E-11 T 14-10-2018 AMIS_5140 c55b230068acc5893ea5cea60ba0f615 123 Gene3D G3DSA:1.25.40.10 3 123 4.9E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_4300 9a1cf2a5512925e1bd1d0147d61eb802 732 SUPERFAMILY SSF82866 117 335 8.63E-27 T 14-10-2018 AMIS_4300 9a1cf2a5512925e1bd1d0147d61eb802 732 Gene3D G3DSA:1.20.1640.10 146 339 1.5E-5 T 14-10-2018 AMIS_4300 9a1cf2a5512925e1bd1d0147d61eb802 732 Pfam PF03176 MMPL family 397 702 3.9E-38 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 AMIS_4300 9a1cf2a5512925e1bd1d0147d61eb802 732 Pfam PF03176 MMPL family 92 366 6.2E-38 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 AMIS_4300 9a1cf2a5512925e1bd1d0147d61eb802 732 SUPERFAMILY SSF82866 466 700 4.84E-30 T 14-10-2018 AMIS_4300 9a1cf2a5512925e1bd1d0147d61eb802 732 Gene3D G3DSA:1.20.1640.10 494 698 1.1E-7 T 14-10-2018 AMIS_5470 23f7180f3a62dee38dea3408d6d8a226 413 Gene3D G3DSA:3.40.309.10 223 371 5.7E-159 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AMIS_5470 23f7180f3a62dee38dea3408d6d8a226 413 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 10 403 2.9E-151 T 14-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AMIS_5470 23f7180f3a62dee38dea3408d6d8a226 413 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 2 413 41.472 T 14-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AMIS_5470 23f7180f3a62dee38dea3408d6d8a226 413 Pfam PF00171 Aldehyde dehydrogenase family 7 278 8.6E-15 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AMIS_5470 23f7180f3a62dee38dea3408d6d8a226 413 SUPERFAMILY SSF53720 5 413 1.3E-113 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMIS_5470 23f7180f3a62dee38dea3408d6d8a226 413 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 320 341 - T 14-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AMIS_5470 23f7180f3a62dee38dea3408d6d8a226 413 Gene3D G3DSA:3.40.605.10 16 408 5.7E-159 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AMIS_5470 23f7180f3a62dee38dea3408d6d8a226 413 PIRSF PIRSF000151 1 413 3.9E-170 T 14-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 AMIS_55970 9e2fd3a38f0af2c9cd24d6e084c52f7b 627 Gene3D G3DSA:1.20.144.10 133 339 4.6E-36 T 14-10-2018 AMIS_55970 9e2fd3a38f0af2c9cd24d6e084c52f7b 627 SUPERFAMILY SSF48317 180 331 1.44E-22 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily AMIS_55970 9e2fd3a38f0af2c9cd24d6e084c52f7b 627 Pfam PF12951 Passenger-associated-transport-repeat 479 507 2.5E-8 T 14-10-2018 IPR013425 Autotransporter-associated beta strand repeat AMIS_55970 9e2fd3a38f0af2c9cd24d6e084c52f7b 627 SMART SM00014 180 317 0.0021 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMIS_55970 9e2fd3a38f0af2c9cd24d6e084c52f7b 627 Pfam PF01569 PAP2 superfamily 191 317 1.5E-11 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMIS_55970 9e2fd3a38f0af2c9cd24d6e084c52f7b 627 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 478 508 3.2E-9 T 14-10-2018 IPR013425 Autotransporter-associated beta strand repeat AMIS_19420 052c0aa9dbe7b4f222d4f56e811ccb45 306 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 210 274 4.8E-13 T 14-10-2018 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal AMIS_19420 052c0aa9dbe7b4f222d4f56e811ccb45 306 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 56 119 3.5E-14 T 14-10-2018 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal AMIS_19420 052c0aa9dbe7b4f222d4f56e811ccb45 306 Gene3D G3DSA:1.10.12.20 1 58 2.6E-7 T 14-10-2018 AMIS_19420 052c0aa9dbe7b4f222d4f56e811ccb45 306 Gene3D G3DSA:1.10.12.20 142 212 1.9E-11 T 14-10-2018 AMIS_19420 052c0aa9dbe7b4f222d4f56e811ccb45 306 Pfam PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) 175 200 4.8E-9 T 14-10-2018 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal AMIS_19420 052c0aa9dbe7b4f222d4f56e811ccb45 306 SUPERFAMILY SSF50249 148 281 5.14E-32 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMIS_19420 052c0aa9dbe7b4f222d4f56e811ccb45 306 SUPERFAMILY SSF50249 2 128 2.57E-29 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMIS_31990 8d467e53a8f580f229b00fafea5944bc 392 SUPERFAMILY SSF56601 67 368 1.78E-68 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMIS_31990 8d467e53a8f580f229b00fafea5944bc 392 ProSitePatterns PS00146 Beta-lactamase class-A active site. 102 117 - T 14-10-2018 IPR023650 Beta-lactamase, class-A active site KEGG: 00311+3.5.2.6 AMIS_31990 8d467e53a8f580f229b00fafea5944bc 392 Gene3D G3DSA:3.40.710.10 55 388 4.1E-86 T 14-10-2018 AMIS_31990 8d467e53a8f580f229b00fafea5944bc 392 Pfam PF00144 Beta-lactamase 71 377 1.8E-53 T 14-10-2018 IPR001466 Beta-lactamase-related AMIS_38190 221e65a85b6e5fe1cf2190ba0e57123f 559 SUPERFAMILY SSF51445 15 484 2.68E-127 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_38190 221e65a85b6e5fe1cf2190ba0e57123f 559 Pfam PF00128 Alpha amylase, catalytic domain 41 395 1.2E-78 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMIS_38190 221e65a85b6e5fe1cf2190ba0e57123f 559 Gene3D G3DSA:3.90.400.10 118 190 4.9E-148 T 14-10-2018 AMIS_38190 221e65a85b6e5fe1cf2190ba0e57123f 559 Pfam PF11941 Domain of unknown function (DUF3459) 470 555 1.7E-9 T 14-10-2018 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) AMIS_38190 221e65a85b6e5fe1cf2190ba0e57123f 559 SMART SM00642 26 423 4.3E-124 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMIS_38190 221e65a85b6e5fe1cf2190ba0e57123f 559 Gene3D G3DSA:3.20.20.80 18 479 4.9E-148 T 14-10-2018 AMIS_81070 eb8c4703d25866ee2538448f14100bbe 594 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 66 585 6.5E-87 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AMIS_81070 eb8c4703d25866ee2538448f14100bbe 594 Pfam PF03023 MviN-like protein 92 542 1.1E-81 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AMIS_81070 eb8c4703d25866ee2538448f14100bbe 594 PRINTS PR01806 Virulence factor MviN signature 214 235 5.1E-12 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AMIS_81070 eb8c4703d25866ee2538448f14100bbe 594 PRINTS PR01806 Virulence factor MviN signature 111 127 5.1E-12 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AMIS_81070 eb8c4703d25866ee2538448f14100bbe 594 PRINTS PR01806 Virulence factor MviN signature 190 214 5.1E-12 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AMIS_81070 eb8c4703d25866ee2538448f14100bbe 594 PRINTS PR01806 Virulence factor MviN signature 523 540 5.1E-12 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AMIS_81070 eb8c4703d25866ee2538448f14100bbe 594 PRINTS PR01806 Virulence factor MviN signature 331 357 5.1E-12 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AMIS_66710 42f6a2d7a98b753cc7d2d90627cd13c3 106 Gene3D G3DSA:3.30.70.1060 1 105 1.5E-22 T 14-10-2018 AMIS_66710 42f6a2d7a98b753cc7d2d90627cd13c3 106 SUPERFAMILY SSF54909 1 94 7.51E-21 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel AMIS_66710 42f6a2d7a98b753cc7d2d90627cd13c3 106 Pfam PF03795 YCII-related domain 1 91 3.8E-16 T 14-10-2018 IPR005545 YCII-related AMIS_9130 72da9aa99747fba2f10175156c0725fa 64 TIGRFAM TIGR04268 FxSxx-COOH: FXSXX-COOH protein 21 64 4.5E-15 T 14-10-2018 IPR026334 FXSXX-COOH protein AMIS_5370 af742a30f778451accaac24d72bb7360 74 Pfam PF11305 Protein of unknown function (DUF3107) 1 71 9.1E-29 T 14-10-2018 IPR021456 Protein of unknown function DUF3107 AMIS_60460 7c7298d118b8142939a374e44298c73e 152 Pfam PF11188 Protein of unknown function (DUF2975) 28 152 9.7E-33 T 14-10-2018 IPR021354 Protein of unknown function DUF2975 AMIS_74620 94715ea4fb3087a9802e1bb661da1731 521 Gene3D G3DSA:3.20.20.240 1 521 5.9E-230 T 14-10-2018 AMIS_74620 94715ea4fb3087a9802e1bb661da1731 521 SUPERFAMILY SSF51703 4 515 1.67E-202 T 14-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 AMIS_74620 94715ea4fb3087a9802e1bb661da1731 521 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 3 518 1.4E-229 T 14-10-2018 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 AMIS_74620 94715ea4fb3087a9802e1bb661da1731 521 Pfam PF01642 Methylmalonyl-CoA mutase 4 513 4.0E-223 T 14-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 AMIS_22710 37507f66b962585aee2e9a4bc529c20b 318 SUPERFAMILY SSF53335 91 270 1.49E-32 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_22710 37507f66b962585aee2e9a4bc529c20b 318 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 197 203 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AMIS_22710 37507f66b962585aee2e9a4bc529c20b 318 Gene3D G3DSA:3.40.50.150 93 268 3.1E-34 T 14-10-2018 AMIS_22710 37507f66b962585aee2e9a4bc529c20b 318 Pfam PF05175 Methyltransferase small domain 128 242 1.6E-18 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 AMIS_34650 c405465f9eb71e99f2866ce0bed7f8aa 475 Pfam PF11870 Domain of unknown function (DUF3390) 402 475 6.8E-12 T 14-10-2018 IPR024569 4Fe-4S binding protein, C-terminal AMIS_34650 c405465f9eb71e99f2866ce0bed7f8aa 475 SUPERFAMILY SSF100950 79 309 2.85E-34 T 14-10-2018 IPR037171 NagB/RpiA transferase-like AMIS_34650 c405465f9eb71e99f2866ce0bed7f8aa 475 Pfam PF13183 4Fe-4S dicluster domain 324 391 2.8E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMIS_34650 c405465f9eb71e99f2866ce0bed7f8aa 475 TIGRFAM TIGR00273 TIGR00273: iron-sulfur cluster-binding protein 33 461 4.1E-136 T 14-10-2018 IPR004452 4Fe-4S binding protein GO:0019516 AMIS_34650 c405465f9eb71e99f2866ce0bed7f8aa 475 SUPERFAMILY SSF54862 305 403 1.55E-12 T 14-10-2018 AMIS_34650 c405465f9eb71e99f2866ce0bed7f8aa 475 Pfam PF02589 LUD domain 84 307 2.9E-44 T 14-10-2018 IPR003741 LUD domain AMIS_34650 c405465f9eb71e99f2866ce0bed7f8aa 475 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 327 338 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMIS_34650 c405465f9eb71e99f2866ce0bed7f8aa 475 Gene3D G3DSA:3.40.50.10420 176 295 5.0E-9 T 14-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily AMIS_52900 0f197bc3458dbc7ad324c1d31ed34aad 331 Pfam PF01497 Periplasmic binding protein 63 300 2.9E-26 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain AMIS_52900 0f197bc3458dbc7ad324c1d31ed34aad 331 SUPERFAMILY SSF53807 45 323 9.81E-51 T 14-10-2018 AMIS_52900 0f197bc3458dbc7ad324c1d31ed34aad 331 Gene3D G3DSA:3.40.50.1980 32 172 4.3E-35 T 14-10-2018 AMIS_52900 0f197bc3458dbc7ad324c1d31ed34aad 331 Gene3D G3DSA:3.40.50.1980 175 331 4.7E-44 T 14-10-2018 AMIS_29460 db1a7649d1949b4c266673fa9bfe4437 831 Pfam PF08531 Alpha-L-rhamnosidase N-terminal domain 35 200 1.1E-50 T 14-10-2018 IPR013737 Bacterial alpha-L-rhamnosidase N-terminal AMIS_29460 db1a7649d1949b4c266673fa9bfe4437 831 Pfam PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain 213 312 2.9E-33 T 14-10-2018 IPR008902 Alpha-L-rhamnosidase, concanavalin-like domain AMIS_29460 db1a7649d1949b4c266673fa9bfe4437 831 SUPERFAMILY SSF48208 313 730 8.5E-53 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AMIS_29460 db1a7649d1949b4c266673fa9bfe4437 831 Pfam PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain 317 662 1.7E-122 T 14-10-2018 IPR035396 Alpha-L-rhamnosidase, six-hairpin glycosidase domain AMIS_29460 db1a7649d1949b4c266673fa9bfe4437 831 PIRSF PIRSF010631 8 755 3.0E-225 T 14-10-2018 IPR016007 Alpha-L-rhamnosidase AMIS_29460 db1a7649d1949b4c266673fa9bfe4437 831 Pfam PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain 664 736 6.0E-21 T 14-10-2018 IPR035398 Alpha-L-rhamnosidase C-terminal domain AMIS_29460 db1a7649d1949b4c266673fa9bfe4437 831 Gene3D G3DSA:1.50.10.10 5 751 5.2E-282 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 AMIS_74010 0631e8089d52cf39fceec48009ffc5f7 224 SUPERFAMILY SSF52317 19 191 8.55E-20 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_74010 0631e8089d52cf39fceec48009ffc5f7 224 Pfam PF03575 Peptidase family S51 17 189 3.0E-27 T 14-10-2018 IPR005320 Peptidase S51 GO:0006508|GO:0008236 AMIS_74010 0631e8089d52cf39fceec48009ffc5f7 224 Gene3D G3DSA:3.40.50.880 5 189 4.9E-28 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_42470 105f1acf93aea16e414c294dbba4e21d 230 Gene3D G3DSA:3.10.180.10 1 117 4.2E-22 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_42470 105f1acf93aea16e414c294dbba4e21d 230 Gene3D G3DSA:3.10.180.10 126 230 6.1E-16 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_42470 105f1acf93aea16e414c294dbba4e21d 230 SUPERFAMILY SSF54593 130 229 4.07E-7 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_42470 105f1acf93aea16e414c294dbba4e21d 230 SUPERFAMILY SSF54593 9 111 8.3E-8 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_73780 ae550dbc297e58ab1d4bee4ca0b4ed2a 233 Gene3D G3DSA:3.40.50.300 2 229 3.9E-59 T 14-10-2018 AMIS_73780 ae550dbc297e58ab1d4bee4ca0b4ed2a 233 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 209 230 7.9E-8 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AMIS_73780 ae550dbc297e58ab1d4bee4ca0b4ed2a 233 SUPERFAMILY SSF52540 8 229 7.78E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_73780 ae550dbc297e58ab1d4bee4ca0b4ed2a 233 Pfam PF00005 ABC transporter 23 162 7.0E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_73780 ae550dbc297e58ab1d4bee4ca0b4ed2a 233 SMART SM00382 32 207 1.1E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_48410 b54b69c7c138ce1e6146c49d3a6651c4 301 SUPERFAMILY SSF75005 28 294 4.89E-16 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMIS_48410 b54b69c7c138ce1e6146c49d3a6651c4 301 Gene3D G3DSA:2.115.10.20 8 139 1.8E-5 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMIS_48410 b54b69c7c138ce1e6146c49d3a6651c4 301 Gene3D G3DSA:2.115.10.20 143 294 2.0E-8 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMIS_71890 c16da2c3391f35f4f9ee69d6888d43ca 155 Pfam PF10739 Protein of unknown function (DUF2550) 11 137 5.7E-38 T 14-10-2018 IPR019675 Protein of unknown function DUF2550 AMIS_62490 38f90b33e66c46dd7056855fd9fcbcf7 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 282 3.8E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_62490 38f90b33e66c46dd7056855fd9fcbcf7 293 Gene3D G3DSA:1.10.3720.10 51 292 3.6E-63 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_62490 38f90b33e66c46dd7056855fd9fcbcf7 293 SUPERFAMILY SSF161098 56 281 2.62E-55 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_60200 ab285b5d9c779e5e7d3dd45ff8356b8a 711 Pfam PF13361 UvrD-like helicase C-terminal domain 628 699 8.2E-12 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AMIS_60200 ab285b5d9c779e5e7d3dd45ff8356b8a 711 Pfam PF13245 AAA domain 250 498 2.6E-18 T 14-10-2018 AMIS_60200 ab285b5d9c779e5e7d3dd45ff8356b8a 711 Gene3D G3DSA:3.30.2310.20 6 91 2.0E-5 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily AMIS_60200 ab285b5d9c779e5e7d3dd45ff8356b8a 711 SUPERFAMILY SSF52540 239 707 1.75E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_60200 ab285b5d9c779e5e7d3dd45ff8356b8a 711 Gene3D G3DSA:3.40.50.300 520 711 6.1E-27 T 14-10-2018 AMIS_72570 986ceaf4e77cb4f6a76002ca47ddc013 449 Pfam PF01522 Polysaccharide deacetylase 192 314 8.8E-29 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMIS_72570 986ceaf4e77cb4f6a76002ca47ddc013 449 Gene3D G3DSA:3.20.20.370 163 379 8.6E-53 T 14-10-2018 AMIS_72570 986ceaf4e77cb4f6a76002ca47ddc013 449 SUPERFAMILY SSF88713 191 377 4.73E-49 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AMIS_23200 ab22b4eb949db62af7f1fe77a67bda57 223 SMART SM00954 58 181 8.2E-41 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 AMIS_23200 ab22b4eb949db62af7f1fe77a67bda57 223 SUPERFAMILY SSF81301 21 212 7.52E-53 T 14-10-2018 AMIS_23200 ab22b4eb949db62af7f1fe77a67bda57 223 Pfam PF04607 Region found in RelA / SpoT proteins 59 178 1.6E-33 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 AMIS_23200 ab22b4eb949db62af7f1fe77a67bda57 223 Gene3D G3DSA:1.10.287.860 164 222 6.0E-19 T 14-10-2018 AMIS_23200 ab22b4eb949db62af7f1fe77a67bda57 223 Gene3D G3DSA:3.30.460.10 13 162 6.6E-47 T 14-10-2018 AMIS_11850 be737df7cd0d45c0a1637ea0667305ea 306 SUPERFAMILY SSF54814 192 306 8.5E-36 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 AMIS_11850 be737df7cd0d45c0a1637ea0667305ea 306 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 24 180 1.1E-18 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AMIS_11850 be737df7cd0d45c0a1637ea0667305ea 306 Pfam PF07650 KH domain 219 295 8.3E-14 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_11850 be737df7cd0d45c0a1637ea0667305ea 306 Pfam PF01926 50S ribosome-binding GTPase 22 136 1.5E-19 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 AMIS_11850 be737df7cd0d45c0a1637ea0667305ea 306 SUPERFAMILY SSF52540 23 224 1.51E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_11850 be737df7cd0d45c0a1637ea0667305ea 306 Gene3D G3DSA:3.30.300.20 197 306 4.5E-38 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta AMIS_11850 be737df7cd0d45c0a1637ea0667305ea 306 TIGRFAM TIGR00436 era: GTP-binding protein Era 20 289 5.9E-73 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_11850 be737df7cd0d45c0a1637ea0667305ea 306 Hamap MF_00367 GTPase Era [era]. 17 306 34.174 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_11850 be737df7cd0d45c0a1637ea0667305ea 306 Gene3D G3DSA:3.40.50.300 18 196 9.8E-43 T 14-10-2018 AMIS_47610 ffb0acaaafc6cf6036053d9cbf310177 526 Gene3D G3DSA:3.10.310.70 89 195 2.4E-85 T 14-10-2018 AMIS_47610 ffb0acaaafc6cf6036053d9cbf310177 526 SUPERFAMILY SSF51556 70 473 1.18E-32 T 14-10-2018 IPR032466 Metal-dependent hydrolase AMIS_47610 ffb0acaaafc6cf6036053d9cbf310177 526 Gene3D G3DSA:3.20.20.140 71 473 2.4E-85 T 14-10-2018 AMIS_47610 ffb0acaaafc6cf6036053d9cbf310177 526 Pfam PF07969 Amidohydrolase family 59 524 2.2E-73 T 14-10-2018 IPR013108 Amidohydrolase 3 AMIS_47610 ffb0acaaafc6cf6036053d9cbf310177 526 SUPERFAMILY SSF51338 14 488 2.28E-11 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMIS_47610 ffb0acaaafc6cf6036053d9cbf310177 526 Gene3D G3DSA:2.30.40.10 24 487 2.4E-85 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMIS_79860 1d2f58d1b0c9c17bfe0bc175c7a77e9a 275 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 7.1E-21 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_79860 1d2f58d1b0c9c17bfe0bc175c7a77e9a 275 Gene3D G3DSA:1.10.10.10 1 89 9.7E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_79860 1d2f58d1b0c9c17bfe0bc175c7a77e9a 275 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 5.9E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_79860 1d2f58d1b0c9c17bfe0bc175c7a77e9a 275 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 5.9E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_79860 1d2f58d1b0c9c17bfe0bc175c7a77e9a 275 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 5.9E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_79860 1d2f58d1b0c9c17bfe0bc175c7a77e9a 275 Gene3D G3DSA:3.40.190.10 165 251 1.5E-12 T 14-10-2018 AMIS_79860 1d2f58d1b0c9c17bfe0bc175c7a77e9a 275 Gene3D G3DSA:3.40.190.10 106 269 1.5E-12 T 14-10-2018 AMIS_79860 1d2f58d1b0c9c17bfe0bc175c7a77e9a 275 Pfam PF03466 LysR substrate binding domain 93 272 5.6E-16 T 14-10-2018 IPR005119 LysR, substrate-binding AMIS_79860 1d2f58d1b0c9c17bfe0bc175c7a77e9a 275 SUPERFAMILY SSF53850 93 273 3.62E-17 T 14-10-2018 AMIS_79860 1d2f58d1b0c9c17bfe0bc175c7a77e9a 275 SUPERFAMILY SSF46785 6 87 9.33E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_23940 1f9b15b01300d941cbfb9408c520518b 410 Gene3D G3DSA:3.40.50.12170 28 405 1.1E-113 T 14-10-2018 AMIS_23940 1f9b15b01300d941cbfb9408c520518b 410 PIRSF PIRSF016719 2 406 1.8E-115 T 14-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 AMIS_23940 1f9b15b01300d941cbfb9408c520518b 410 Pfam PF07075 Protein of unknown function (DUF1343) 47 405 7.1E-113 T 14-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 AMIS_23940 1f9b15b01300d941cbfb9408c520518b 410 Gene3D G3DSA:3.90.1150.140 240 390 1.1E-113 T 14-10-2018 AMIS_13110 f6a68d1c02591f865466892fc5e0b6d6 393 Gene3D G3DSA:1.10.10.2840 265 391 2.8E-41 T 14-10-2018 AMIS_13110 f6a68d1c02591f865466892fc5e0b6d6 393 Pfam PF13556 PucR C-terminal helix-turn-helix domain 328 386 3.4E-19 T 14-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain AMIS_76620 9fe7af6a2112dd895782a3f20065c426 467 PRINTS PR00131 Glycosyl hydrolase family 1 signature 435 447 1.4E-21 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMIS_76620 9fe7af6a2112dd895782a3f20065c426 467 PRINTS PR00131 Glycosyl hydrolase family 1 signature 411 428 1.4E-21 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMIS_76620 9fe7af6a2112dd895782a3f20065c426 467 PRINTS PR00131 Glycosyl hydrolase family 1 signature 300 314 1.4E-21 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMIS_76620 9fe7af6a2112dd895782a3f20065c426 467 PRINTS PR00131 Glycosyl hydrolase family 1 signature 369 377 1.4E-21 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMIS_76620 9fe7af6a2112dd895782a3f20065c426 467 PRINTS PR00131 Glycosyl hydrolase family 1 signature 390 401 1.4E-21 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMIS_76620 9fe7af6a2112dd895782a3f20065c426 467 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 23 37 - T 14-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site AMIS_76620 9fe7af6a2112dd895782a3f20065c426 467 Pfam PF00232 Glycosyl hydrolase family 1 18 465 9.6E-169 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMIS_76620 9fe7af6a2112dd895782a3f20065c426 467 TIGRFAM TIGR03356 BGL: beta-galactosidase 19 457 5.1E-187 T 14-10-2018 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase GO:0008422|GO:0030245 KEGG: 00460+3.2.1.21|KEGG: 00500+3.2.1.21|KEGG: 00940+3.2.1.21|MetaCyc: PWY-3121|MetaCyc: PWY-5176|MetaCyc: PWY-6002|MetaCyc: PWY-6788|MetaCyc: PWY-7091|MetaCyc: PWY-7092|MetaCyc: PWY-7913 AMIS_76620 9fe7af6a2112dd895782a3f20065c426 467 Gene3D G3DSA:3.20.20.80 13 466 4.4E-182 T 14-10-2018 AMIS_76620 9fe7af6a2112dd895782a3f20065c426 467 SUPERFAMILY SSF51445 18 465 4.47E-168 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_76310 d731bd45649f7f40f7b7474cf89f7db1 327 Pfam PF01464 Transglycosylase SLT domain 207 312 1.5E-30 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 AMIS_76310 d731bd45649f7f40f7b7474cf89f7db1 327 Gene3D G3DSA:3.90.1720.10 11 175 1.1E-44 T 14-10-2018 AMIS_76310 d731bd45649f7f40f7b7474cf89f7db1 327 SUPERFAMILY SSF53955 202 322 9.07E-43 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily AMIS_76310 d731bd45649f7f40f7b7474cf89f7db1 327 Pfam PF00877 NlpC/P60 family 72 167 4.7E-22 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain AMIS_76310 d731bd45649f7f40f7b7474cf89f7db1 327 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 225 253 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 AMIS_76310 d731bd45649f7f40f7b7474cf89f7db1 327 Gene3D G3DSA:1.10.530.10 199 325 5.3E-42 T 14-10-2018 AMIS_76310 d731bd45649f7f40f7b7474cf89f7db1 327 SUPERFAMILY SSF54001 55 172 6.87E-36 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily AMIS_8440 3f45e54832e488495bf49e315b3a7ba8 427 PIRSF PIRSF005962 3 398 1.8E-107 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 AMIS_8440 3f45e54832e488495bf49e315b3a7ba8 427 Gene3D G3DSA:3.40.630.10 14 378 1.7E-125 T 14-10-2018 AMIS_8440 3f45e54832e488495bf49e315b3a7ba8 427 SUPERFAMILY SSF53187 10 394 3.55E-73 T 14-10-2018 AMIS_8440 3f45e54832e488495bf49e315b3a7ba8 427 SUPERFAMILY SSF55031 185 303 5.36E-31 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AMIS_8440 3f45e54832e488495bf49e315b3a7ba8 427 Pfam PF07687 Peptidase dimerisation domain 189 284 1.7E-13 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain AMIS_8440 3f45e54832e488495bf49e315b3a7ba8 427 Pfam PF01546 Peptidase family M20/M25/M40 72 390 5.0E-29 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 AMIS_8440 3f45e54832e488495bf49e315b3a7ba8 427 Gene3D G3DSA:3.30.70.360 185 299 1.7E-125 T 14-10-2018 AMIS_8440 3f45e54832e488495bf49e315b3a7ba8 427 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 14 380 4.7E-95 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 AMIS_54820 7694a904ff64debf6a472817514c052d 689 SUPERFAMILY SSF49299 490 579 6.02E-16 T 14-10-2018 IPR035986 PKD domain superfamily AMIS_54820 7694a904ff64debf6a472817514c052d 689 SMART SM00089 499 584 3.2E-13 T 14-10-2018 IPR022409 PKD/Chitinase domain AMIS_54820 7694a904ff64debf6a472817514c052d 689 Pfam PF07995 Glucose / Sorbosone dehydrogenase 47 328 4.5E-30 T 14-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase AMIS_54820 7694a904ff64debf6a472817514c052d 689 Gene3D G3DSA:2.120.10.30 27 411 5.3E-63 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AMIS_54820 7694a904ff64debf6a472817514c052d 689 Pfam PF00801 PKD domain 503 573 2.1E-7 T 14-10-2018 IPR000601 PKD domain AMIS_54820 7694a904ff64debf6a472817514c052d 689 Gene3D G3DSA:2.60.40.10 490 582 7.2E-20 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_54820 7694a904ff64debf6a472817514c052d 689 SUPERFAMILY SSF50952 34 477 7.45E-23 T 14-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 AMIS_71960 82a2978d81c8cd58ce5652e9140c6830 185 Hamap MF_01398 ATP synthase subunit b [atpF]. 11 156 12.58 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AMIS_71960 82a2978d81c8cd58ce5652e9140c6830 185 Pfam PF00430 ATP synthase B/B' CF(0) 25 154 1.8E-29 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AMIS_71960 82a2978d81c8cd58ce5652e9140c6830 185 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 30 174 6.8E-28 T 14-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 AMIS_71960 82a2978d81c8cd58ce5652e9140c6830 185 SUPERFAMILY SSF81573 81 139 2.22E-10 T 14-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily AMIS_61040 ae101cb6534c7f5a0db440971f6b66bd 334 Gene3D G3DSA:3.40.50.1000 10 239 1.2E-74 T 14-10-2018 IPR023214 HAD superfamily AMIS_61040 ae101cb6534c7f5a0db440971f6b66bd 334 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 12 236 1.9E-35 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA AMIS_61040 ae101cb6534c7f5a0db440971f6b66bd 334 Pfam PF13242 HAD-hyrolase-like 189 260 4.0E-17 T 14-10-2018 AMIS_61040 ae101cb6534c7f5a0db440971f6b66bd 334 Gene3D G3DSA:3.40.50.1000 77 189 1.2E-74 T 14-10-2018 IPR023214 HAD superfamily AMIS_61040 ae101cb6534c7f5a0db440971f6b66bd 334 Pfam PF13344 Haloacid dehalogenase-like hydrolase 12 112 1.5E-23 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA AMIS_61040 ae101cb6534c7f5a0db440971f6b66bd 334 PIRSF PIRSF000915 1 268 6.4E-55 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA AMIS_61040 ae101cb6534c7f5a0db440971f6b66bd 334 SUPERFAMILY SSF56784 9 262 6.8E-54 T 14-10-2018 IPR036412 HAD-like superfamily AMIS_6980 259440ab212e905fc4419377132d46e6 297 SUPERFAMILY SSF55811 4 133 6.77E-24 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMIS_6980 259440ab212e905fc4419377132d46e6 297 SUPERFAMILY SSF55811 153 294 1.19E-26 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMIS_6980 259440ab212e905fc4419377132d46e6 297 Gene3D G3DSA:3.90.79.10 155 295 5.0E-24 T 14-10-2018 AMIS_6980 259440ab212e905fc4419377132d46e6 297 Gene3D G3DSA:3.90.79.10 1 131 2.0E-23 T 14-10-2018 AMIS_6980 259440ab212e905fc4419377132d46e6 297 PRINTS PR00502 NUDIX hydrolase family signature 35 49 3.8E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AMIS_6980 259440ab212e905fc4419377132d46e6 297 PRINTS PR00502 NUDIX hydrolase family signature 49 64 3.8E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AMIS_6980 259440ab212e905fc4419377132d46e6 297 Pfam PF00293 NUDIX domain 5 123 1.0E-16 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMIS_6980 259440ab212e905fc4419377132d46e6 297 Pfam PF00293 NUDIX domain 159 293 3.1E-15 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMIS_6980 259440ab212e905fc4419377132d46e6 297 ProSitePatterns PS00893 Nudix box signature. 40 61 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMIS_35260 52b7b644c95a50b51a9e25cfa7df1eee 467 PIRSF PIRSF029171 9 460 5.1E-47 T 14-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 AMIS_35260 52b7b644c95a50b51a9e25cfa7df1eee 467 Gene3D G3DSA:1.10.260.130 279 371 1.6E-83 T 14-10-2018 AMIS_35260 52b7b644c95a50b51a9e25cfa7df1eee 467 SUPERFAMILY SSF53474 100 416 3.15E-16 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_35260 52b7b644c95a50b51a9e25cfa7df1eee 467 Gene3D G3DSA:3.40.50.1820 65 450 1.6E-83 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_35260 52b7b644c95a50b51a9e25cfa7df1eee 467 Pfam PF03583 Secretory lipase 171 456 1.5E-69 T 14-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 AMIS_51460 654f23794f945698928151fd470eb43e 504 SUPERFAMILY SSF50370 166 367 8.82E-11 T 14-10-2018 IPR035992 Ricin B-like lectins AMIS_51460 654f23794f945698928151fd470eb43e 504 SUPERFAMILY SSF50370 334 489 9.05E-10 T 14-10-2018 IPR035992 Ricin B-like lectins AMIS_51460 654f23794f945698928151fd470eb43e 504 Gene3D G3DSA:2.80.10.50 163 319 2.4E-8 T 14-10-2018 AMIS_51460 654f23794f945698928151fd470eb43e 504 Gene3D G3DSA:2.80.10.50 328 491 8.4E-14 T 14-10-2018 AMIS_73220 42a44cd2754f9b21e6c21d44292cd4c6 253 Pfam PF00805 Pentapeptide repeats (8 copies) 201 237 5.3E-12 T 14-10-2018 IPR001646 Pentapeptide repeat AMIS_73220 42a44cd2754f9b21e6c21d44292cd4c6 253 Gene3D G3DSA:2.160.20.100 163 250 6.2E-21 T 14-10-2018 AMIS_73220 42a44cd2754f9b21e6c21d44292cd4c6 253 SUPERFAMILY SSF141571 57 239 2.65E-19 T 14-10-2018 AMIS_37840 2c5b152ad65b953df18b6455dac6f45e 305 Gene3D G3DSA:3.90.1580.10 24 305 5.2E-112 T 14-10-2018 AMIS_37840 2c5b152ad65b953df18b6455dac6f45e 305 SUPERFAMILY SSF56436 27 301 6.03E-84 T 14-10-2018 IPR016187 C-type lectin fold AMIS_37840 2c5b152ad65b953df18b6455dac6f45e 305 Pfam PF03781 Sulfatase-modifying factor enzyme 1 28 301 5.1E-76 T 14-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 AMIS_35210 2959e53bfe85f09afb6cbb4a3d700124 263 Pfam PF01061 ABC-2 type transporter 13 227 8.1E-29 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 AMIS_35210 2959e53bfe85f09afb6cbb4a3d700124 263 PIRSF PIRSF006648 1 262 6.3E-66 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AMIS_25400 819fb0150260989951de4465ee9b3d42 134 Gene3D G3DSA:3.10.590.10 1 129 9.6E-20 T 14-10-2018 AMIS_25400 819fb0150260989951de4465ee9b3d42 134 SUPERFAMILY SSF88697 2 132 2.73E-21 T 14-10-2018 IPR015947 PUA-like superfamily AMIS_25400 819fb0150260989951de4465ee9b3d42 134 Pfam PF01878 EVE domain 3 128 9.4E-8 T 14-10-2018 IPR002740 EVE domain AMIS_25400 819fb0150260989951de4465ee9b3d42 134 Hamap MF_00771 UPF0310 protein . 1 132 22.496 T 14-10-2018 IPR022996 Uncharacterised protein family UPF0310 AMIS_6900 bfe318d7963e6aa55fb1d30ca1a6407e 136 ProDom PD032647 MB3446 ML0386 RV3412/MT3521 CGL0602 32 122 3.0E-32 T 14-10-2018 IPR035165 Protein of unknown function DUF5319 AMIS_6900 bfe318d7963e6aa55fb1d30ca1a6407e 136 Pfam PF17252 Family of unknown function (DUF5319) 4 124 1.5E-50 T 14-10-2018 IPR035165 Protein of unknown function DUF5319 AMIS_25890 1dac53d09482fff854eba0888be85ffb 179 Gene3D G3DSA:1.10.1740.10 2 98 1.7E-12 T 14-10-2018 AMIS_25890 1dac53d09482fff854eba0888be85ffb 179 Pfam PF04545 Sigma-70, region 4 109 158 1.1E-10 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 AMIS_25890 1dac53d09482fff854eba0888be85ffb 179 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 6 159 1.6E-21 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_25890 1dac53d09482fff854eba0888be85ffb 179 Pfam PF04542 Sigma-70 region 2 9 76 5.5E-15 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_25890 1dac53d09482fff854eba0888be85ffb 179 SUPERFAMILY SSF88659 94 160 5.05E-12 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_25890 1dac53d09482fff854eba0888be85ffb 179 Gene3D G3DSA:1.10.10.10 99 164 3.4E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_25890 1dac53d09482fff854eba0888be85ffb 179 SUPERFAMILY SSF88946 6 87 4.32E-16 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_49620 cffbcd5a16d1586446adfb44e2ff80a8 117 SUPERFAMILY SSF54427 1 103 1.53E-23 T 14-10-2018 IPR032710 NTF2-like domain superfamily AMIS_49620 cffbcd5a16d1586446adfb44e2ff80a8 117 Pfam PF12680 SnoaL-like domain 7 102 5.3E-19 T 14-10-2018 IPR037401 SnoaL-like domain AMIS_49620 cffbcd5a16d1586446adfb44e2ff80a8 117 Gene3D G3DSA:3.10.450.50 1 112 8.2E-30 T 14-10-2018 AMIS_30090 8eba0a8d94423cf54c5b6ca61e5a2a93 193 Pfam PF00041 Fibronectin type III domain 89 174 7.3E-8 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 AMIS_30090 8eba0a8d94423cf54c5b6ca61e5a2a93 193 SUPERFAMILY SSF49265 87 175 8.76E-9 T 14-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 AMIS_30090 8eba0a8d94423cf54c5b6ca61e5a2a93 193 SMART SM00060 86 176 1.6E-4 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 AMIS_30090 8eba0a8d94423cf54c5b6ca61e5a2a93 193 Gene3D G3DSA:2.60.40.10 76 181 5.5E-8 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_78640 320969d9f70251342d6e061f622d33a2 314 Pfam PF02153 Prephenate dehydrogenase 18 248 5.8E-41 T 14-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 AMIS_78640 320969d9f70251342d6e061f622d33a2 314 SUPERFAMILY SSF51735 2 157 4.06E-31 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_78640 320969d9f70251342d6e061f622d33a2 314 Gene3D G3DSA:1.10.3660.10 165 269 8.2E-25 T 14-10-2018 AMIS_78640 320969d9f70251342d6e061f622d33a2 314 SUPERFAMILY SSF48179 162 267 7.6E-21 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMIS_78640 320969d9f70251342d6e061f622d33a2 314 Gene3D G3DSA:3.40.50.720 1 164 3.5E-48 T 14-10-2018 AMIS_55040 b90d7df63ada5de7410df3d9a5bf012a 260 Gene3D G3DSA:3.40.50.150 7 242 2.2E-35 T 14-10-2018 AMIS_55040 b90d7df63ada5de7410df3d9a5bf012a 260 Pfam PF13649 Methyltransferase domain 36 132 1.2E-17 T 14-10-2018 AMIS_55040 b90d7df63ada5de7410df3d9a5bf012a 260 SUPERFAMILY SSF53335 7 201 6.6E-34 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_9390 3e99d521da635bd8465ed040a64bba49 96 SUPERFAMILY SSF54736 18 94 6.8E-25 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AMIS_9390 3e99d521da635bd8465ed040a64bba49 96 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 21 91 3.2E-21 T 14-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 AMIS_9390 3e99d521da635bd8465ed040a64bba49 96 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 7 96 16.156 T 14-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS AMIS_9390 3e99d521da635bd8465ed040a64bba49 96 Gene3D G3DSA:3.30.1390.10 4 93 1.1E-18 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AMIS_73150 10d60aa6ac66340afb63c2a7ea2fb9e9 691 Gene3D G3DSA:3.20.20.80 124 620 1.9E-110 T 14-10-2018 AMIS_73150 10d60aa6ac66340afb63c2a7ea2fb9e9 691 Pfam PF14013 MT0933-like antitoxin protein 638 685 4.2E-15 T 14-10-2018 IPR028037 Antitoxin Rv0909/MT0933 AMIS_73150 10d60aa6ac66340afb63c2a7ea2fb9e9 691 SUPERFAMILY SSF51445 127 622 1.56E-123 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_73150 10d60aa6ac66340afb63c2a7ea2fb9e9 691 Pfam PF02446 4-alpha-glucanotransferase 132 608 6.7E-102 T 14-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 AMIS_73150 10d60aa6ac66340afb63c2a7ea2fb9e9 691 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 127 616 6.0E-84 T 14-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 AMIS_67510 7f5fb25a820f74c4164e7053e73e66b2 429 Gene3D G3DSA:3.50.50.60 1 414 3.9E-114 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_67510 7f5fb25a820f74c4164e7053e73e66b2 429 SUPERFAMILY SSF51905 1 240 1.89E-20 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_67510 7f5fb25a820f74c4164e7053e73e66b2 429 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 3 330 5.5E-112 T 14-10-2018 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase AMIS_47030 12f81bf2b9a3cbd0b8e0ca58a8bf0a0b 333 ProSitePatterns PS00485 Adenosine and AMP deaminase signature. 287 293 - T 14-10-2018 IPR006650 Adenosine/AMP deaminase active site GO:0009168|GO:0019239 Reactome: R-HSA-74217 AMIS_47030 12f81bf2b9a3cbd0b8e0ca58a8bf0a0b 333 Gene3D G3DSA:3.20.20.140 2 333 2.6E-83 T 14-10-2018 AMIS_47030 12f81bf2b9a3cbd0b8e0ca58a8bf0a0b 333 Pfam PF00962 Adenosine/AMP deaminase 3 118 5.0E-9 T 14-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 AMIS_47030 12f81bf2b9a3cbd0b8e0ca58a8bf0a0b 333 Pfam PF00962 Adenosine/AMP deaminase 174 330 9.6E-46 T 14-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 AMIS_47030 12f81bf2b9a3cbd0b8e0ca58a8bf0a0b 333 SUPERFAMILY SSF51556 3 322 9.91E-65 T 14-10-2018 IPR032466 Metal-dependent hydrolase AMIS_71550 93b9d73c029d54b240b44293525b0a77 302 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 241 254 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AMIS_71550 93b9d73c029d54b240b44293525b0a77 302 Gene3D G3DSA:3.40.1190.20 1 300 1.2E-89 T 14-10-2018 IPR029056 Ribokinase-like AMIS_71550 93b9d73c029d54b240b44293525b0a77 302 Hamap MF_01987 Ribokinase [rbsK]. 3 296 25.076 T 14-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 AMIS_71550 93b9d73c029d54b240b44293525b0a77 302 PRINTS PR00990 Ribokinase signature 34 53 2.6E-30 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AMIS_71550 93b9d73c029d54b240b44293525b0a77 302 PRINTS PR00990 Ribokinase signature 7 28 2.6E-30 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AMIS_71550 93b9d73c029d54b240b44293525b0a77 302 PRINTS PR00990 Ribokinase signature 211 222 2.6E-30 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AMIS_71550 93b9d73c029d54b240b44293525b0a77 302 PRINTS PR00990 Ribokinase signature 172 187 2.6E-30 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AMIS_71550 93b9d73c029d54b240b44293525b0a77 302 PRINTS PR00990 Ribokinase signature 105 118 2.6E-30 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AMIS_71550 93b9d73c029d54b240b44293525b0a77 302 SUPERFAMILY SSF53613 3 296 1.17E-69 T 14-10-2018 IPR029056 Ribokinase-like AMIS_71550 93b9d73c029d54b240b44293525b0a77 302 Pfam PF00294 pfkB family carbohydrate kinase 4 289 1.8E-56 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB AMIS_1350 a1196363ef1e9295bf7a2b792da61705 421 Gene3D G3DSA:2.40.10.350 323 405 6.7E-9 T 14-10-2018 AMIS_1350 a1196363ef1e9295bf7a2b792da61705 421 Pfam PF04085 rod shape-determining protein MreC 292 415 2.6E-8 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 AMIS_1350 a1196363ef1e9295bf7a2b792da61705 421 Gene3D G3DSA:2.40.10.340 277 412 6.7E-9 T 14-10-2018 AMIS_77100 a06c0af4720f926b459eef014c11aaa9 293 Pfam PF12679 ABC-2 family transporter protein 24 291 9.5E-18 T 14-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 AMIS_3890 cbf187f439b7cbba7663c71c87c63086 368 Gene3D G3DSA:1.10.230.10 208 308 7.1E-70 T 14-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain AMIS_3890 cbf187f439b7cbba7663c71c87c63086 368 Pfam PF00285 Citrate synthase, C-terminal domain 7 343 1.6E-86 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 AMIS_3890 cbf187f439b7cbba7663c71c87c63086 368 Gene3D G3DSA:1.10.580.10 107 334 7.1E-70 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AMIS_3890 cbf187f439b7cbba7663c71c87c63086 368 SUPERFAMILY SSF48256 4 354 9.42E-96 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 AMIS_3890 cbf187f439b7cbba7663c71c87c63086 368 Gene3D G3DSA:1.10.580.10 1 58 3.9E-10 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AMIS_65660 d751465772fbe953ce9f8ef2faa51715 332 Pfam PF00294 pfkB family carbohydrate kinase 45 318 2.4E-45 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB AMIS_65660 d751465772fbe953ce9f8ef2faa51715 332 Gene3D G3DSA:3.40.1190.20 26 328 4.3E-80 T 14-10-2018 IPR029056 Ribokinase-like AMIS_65660 d751465772fbe953ce9f8ef2faa51715 332 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 270 283 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AMIS_65660 d751465772fbe953ce9f8ef2faa51715 332 SUPERFAMILY SSF53613 27 324 1.25E-68 T 14-10-2018 IPR029056 Ribokinase-like AMIS_25000 968084371dd688d198006ecfd91354f4 190 SUPERFAMILY SSF51182 97 179 3.34E-17 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily AMIS_25000 968084371dd688d198006ecfd91354f4 190 Gene3D G3DSA:1.10.260.40 10 83 1.0E-15 T 14-10-2018 AMIS_25000 968084371dd688d198006ecfd91354f4 190 Pfam PF07883 Cupin domain 124 180 1.5E-11 T 14-10-2018 IPR013096 Cupin 2, conserved barrel AMIS_25000 968084371dd688d198006ecfd91354f4 190 Gene3D G3DSA:2.60.120.10 84 189 8.7E-14 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMIS_25000 968084371dd688d198006ecfd91354f4 190 SUPERFAMILY SSF47413 7 77 8.04E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_25000 968084371dd688d198006ecfd91354f4 190 Pfam PF01381 Helix-turn-helix 16 69 1.4E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMIS_25000 968084371dd688d198006ecfd91354f4 190 SMART SM00530 15 70 1.4E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMIS_53680 9b68562262e8e19602aa0e4f4103e742 370 Pfam PF12705 PD-(D/E)XK nuclease superfamily 153 331 5.0E-20 T 14-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type AMIS_53680 9b68562262e8e19602aa0e4f4103e742 370 Pfam PF12705 PD-(D/E)XK nuclease superfamily 16 92 1.1E-11 T 14-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type AMIS_71720 dcd03143f3a78ed9c800eb353206eb6c 448 Pfam PF01594 AI-2E family transporter 125 439 4.2E-55 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like AMIS_42710 1c4a3134edb1b8121c9209698dd79fcf 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 186 0.0016 T 14-10-2018 AMIS_42710 1c4a3134edb1b8121c9209698dd79fcf 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 1.5E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_42710 1c4a3134edb1b8121c9209698dd79fcf 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 1.5E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_42710 1c4a3134edb1b8121c9209698dd79fcf 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 1.5E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_42710 1c4a3134edb1b8121c9209698dd79fcf 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.5E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_42710 1c4a3134edb1b8121c9209698dd79fcf 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 1.5E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_42710 1c4a3134edb1b8121c9209698dd79fcf 245 Pfam PF00106 short chain dehydrogenase 5 193 1.7E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_42710 1c4a3134edb1b8121c9209698dd79fcf 245 Gene3D G3DSA:3.40.50.720 1 244 6.4E-51 T 14-10-2018 AMIS_42710 1c4a3134edb1b8121c9209698dd79fcf 245 SUPERFAMILY SSF51735 2 243 4.82E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_42710 1c4a3134edb1b8121c9209698dd79fcf 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 6.4E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_42710 1c4a3134edb1b8121c9209698dd79fcf 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 6.4E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_42710 1c4a3134edb1b8121c9209698dd79fcf 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 6.4E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_33530 093ee2327b0798e6ed81aeedc7de1136 258 Pfam PF05630 Necrosis inducing protein (NPP1) 44 247 2.8E-61 T 14-10-2018 IPR008701 Necrosis inducing protein AMIS_33530 093ee2327b0798e6ed81aeedc7de1136 258 PIRSF PIRSF029958 3 258 1.2E-99 T 14-10-2018 IPR008701 Necrosis inducing protein AMIS_34050 bd408a135605791d3f02c037cd6512f8 184 SUPERFAMILY SSF109604 26 99 1.28E-15 T 14-10-2018 AMIS_34050 bd408a135605791d3f02c037cd6512f8 184 TIGRFAM TIGR00277 HDIG: HDIG domain 29 99 1.3E-8 T 14-10-2018 IPR006675 HDIG domain AMIS_34050 bd408a135605791d3f02c037cd6512f8 184 Gene3D G3DSA:1.10.3210.10 9 121 9.9E-9 T 14-10-2018 AMIS_34050 bd408a135605791d3f02c037cd6512f8 184 Pfam PF01966 HD domain 27 106 1.8E-7 T 14-10-2018 IPR006674 HD domain AMIS_14220 a0d9f24afc4c42934efcdf893a94a58c 270 SUPERFAMILY SSF46626 142 225 5.59E-24 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMIS_14220 a0d9f24afc4c42934efcdf893a94a58c 270 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 50 126 6.8E-8 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_14220 a0d9f24afc4c42934efcdf893a94a58c 270 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 150 223 5.2E-14 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_14220 a0d9f24afc4c42934efcdf893a94a58c 270 PIRSF PIRSF000007 2 270 2.5E-101 T 14-10-2018 IPR009152 Cytochrome bc1 complex, cytochrome c subunit GO:0005506|GO:0009055|GO:0016021|GO:0020037 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 AMIS_14220 a0d9f24afc4c42934efcdf893a94a58c 270 SUPERFAMILY SSF46626 23 132 5.76E-16 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMIS_14220 a0d9f24afc4c42934efcdf893a94a58c 270 Gene3D G3DSA:1.10.760.10 138 233 7.2E-15 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMIS_14220 a0d9f24afc4c42934efcdf893a94a58c 270 Gene3D G3DSA:1.10.760.10 11 130 8.9E-12 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMIS_37430 b35c55204d8cdeec9d13d63edeb14dc9 534 Pfam PF00672 HAMP domain 219 264 1.1E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_37430 b35c55204d8cdeec9d13d63edeb14dc9 534 Gene3D G3DSA:1.10.287.950 219 534 4.7E-59 T 14-10-2018 AMIS_37430 b35c55204d8cdeec9d13d63edeb14dc9 534 SMART SM00283 279 533 3.0E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_37430 b35c55204d8cdeec9d13d63edeb14dc9 534 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 340 501 1.9E-33 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_37430 b35c55204d8cdeec9d13d63edeb14dc9 534 SMART SM00304 219 271 4.2E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_37430 b35c55204d8cdeec9d13d63edeb14dc9 534 Pfam PF12729 Four helix bundle sensory module for signal transduction 112 191 4.4E-7 T 14-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain AMIS_37430 b35c55204d8cdeec9d13d63edeb14dc9 534 SUPERFAMILY SSF58104 239 532 6.67E-58 T 14-10-2018 AMIS_74860 f893e8314ddb1b6d121f50a5b4fa6502 353 Gene3D G3DSA:3.40.50.2300 43 316 1.7E-81 T 14-10-2018 AMIS_74860 f893e8314ddb1b6d121f50a5b4fa6502 353 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 37 337 5.7E-52 T 14-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 AMIS_74860 f893e8314ddb1b6d121f50a5b4fa6502 353 SUPERFAMILY SSF53822 48 288 1.97E-9 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_74860 f893e8314ddb1b6d121f50a5b4fa6502 353 Gene3D G3DSA:3.40.50.2300 138 343 1.7E-81 T 14-10-2018 AMIS_62790 046b58a6a4deb76711c60758b6b7eed0 128 PRINTS PR01853 Bacterial YajC preprotein translocase signature 16 36 4.5E-11 T 14-10-2018 IPR003849 Preprotein translocase YajC AMIS_62790 046b58a6a4deb76711c60758b6b7eed0 128 PRINTS PR01853 Bacterial YajC preprotein translocase signature 54 72 4.5E-11 T 14-10-2018 IPR003849 Preprotein translocase YajC AMIS_62790 046b58a6a4deb76711c60758b6b7eed0 128 SMART SM01323 14 96 2.6E-40 T 14-10-2018 IPR003849 Preprotein translocase YajC AMIS_62790 046b58a6a4deb76711c60758b6b7eed0 128 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 18 96 3.8E-24 T 14-10-2018 IPR003849 Preprotein translocase YajC AMIS_62790 046b58a6a4deb76711c60758b6b7eed0 128 Pfam PF02699 Preprotein translocase subunit 19 94 1.0E-27 T 14-10-2018 IPR003849 Preprotein translocase YajC AMIS_26120 097be41cf7d155c93c0e247a3c3f2030 388 Pfam PF02687 FtsX-like permease family 295 383 6.1E-13 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AMIS_26120 097be41cf7d155c93c0e247a3c3f2030 388 Pfam PF12704 MacB-like periplasmic core domain 23 225 3.9E-13 T 14-10-2018 IPR025857 MacB-like periplasmic core domain AMIS_50910 8a9cea9c27a2757d86ff73ac488bd32e 254 Pfam PF13649 Methyltransferase domain 37 126 2.5E-9 T 14-10-2018 AMIS_50910 8a9cea9c27a2757d86ff73ac488bd32e 254 SUPERFAMILY SSF53335 26 127 1.79E-12 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_62310 1d69efb4482c4c55dfe11a786dc4aceb 393 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 31 388 25.522 T 14-10-2018 IPR003770 Endolytic murein transglycosylase AMIS_62310 1d69efb4482c4c55dfe11a786dc4aceb 393 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 69 387 3.3E-42 T 14-10-2018 IPR003770 Endolytic murein transglycosylase AMIS_62310 1d69efb4482c4c55dfe11a786dc4aceb 393 Pfam PF02618 YceG-like family 74 383 2.3E-60 T 14-10-2018 IPR003770 Endolytic murein transglycosylase AMIS_62310 1d69efb4482c4c55dfe11a786dc4aceb 393 Gene3D G3DSA:1.10.8.1150 70 137 3.3E-10 T 14-10-2018 AMIS_38760 40ec708346a70ba7ec5035443d1db440 136 Pfam PF03713 Domain of unknown function (DUF305) 7 128 6.6E-10 T 14-10-2018 IPR005183 Domain of unknown function DUF305 AMIS_38760 40ec708346a70ba7ec5035443d1db440 136 Gene3D G3DSA:1.20.1260.10 2 132 9.5E-13 T 14-10-2018 IPR012347 Ferritin-like AMIS_63190 e26849e1d6dee51f0efb64b11a92a7f3 422 TIGRFAM TIGR04053 sam_11: radical SAM protein, BA_1875 family 21 389 7.0E-148 T 14-10-2018 IPR027634 Radical SAM protein, BA_1875 family AMIS_63190 e26849e1d6dee51f0efb64b11a92a7f3 422 Pfam PF04055 Radical SAM superfamily 33 179 2.0E-13 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMIS_63190 e26849e1d6dee51f0efb64b11a92a7f3 422 PIRSF PIRSF037420 10 396 1.0E-84 T 14-10-2018 IPR017200 Coenzyme PQQ synthesis protein E AMIS_63190 e26849e1d6dee51f0efb64b11a92a7f3 422 Gene3D G3DSA:3.20.20.70 23 336 5.2E-32 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_63190 e26849e1d6dee51f0efb64b11a92a7f3 422 SUPERFAMILY SSF102114 25 366 1.44E-53 T 14-10-2018 AMIS_75700 2c3e4e6dea6fbabbaaf20b6b44ce5887 125 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 24 124 3.3E-27 T 14-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_75700 2c3e4e6dea6fbabbaaf20b6b44ce5887 125 Gene3D G3DSA:1.20.58.1610 3 125 6.5E-31 T 14-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_73720 57dd2ab88dfa8193928886b7cb697192 478 Pfam PF01523 Putative modulator of DNA gyrase 21 326 4.7E-51 T 14-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AMIS_73720 57dd2ab88dfa8193928886b7cb697192 478 SUPERFAMILY SSF111283 2 471 2.75E-87 T 14-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 AMIS_73720 57dd2ab88dfa8193928886b7cb697192 478 Gene3D G3DSA:3.30.2290.10 3 198 8.4E-16 T 14-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal AMIS_1190 0d20a6907e96bfe8873fb6645a38e3f4 792 SUPERFAMILY SSF56042 599 767 2.69E-40 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AMIS_1190 0d20a6907e96bfe8873fb6645a38e3f4 792 Pfam PF02769 AIR synthase related protein, C-terminal domain 218 367 1.4E-33 T 14-10-2018 IPR010918 PurM-like, C-terminal domain AMIS_1190 0d20a6907e96bfe8873fb6645a38e3f4 792 Pfam PF02769 AIR synthase related protein, C-terminal domain 604 745 3.6E-20 T 14-10-2018 IPR010918 PurM-like, C-terminal domain AMIS_1190 0d20a6907e96bfe8873fb6645a38e3f4 792 SUPERFAMILY SSF55326 26 212 2.84E-47 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AMIS_1190 0d20a6907e96bfe8873fb6645a38e3f4 792 Gene3D G3DSA:3.90.650.10 599 769 2.6E-41 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AMIS_1190 0d20a6907e96bfe8873fb6645a38e3f4 792 Gene3D G3DSA:3.30.1330.10 413 588 1.6E-57 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AMIS_1190 0d20a6907e96bfe8873fb6645a38e3f4 792 TIGRFAM TIGR01736 FGAM_synth_II: phosphoribosylformylglycinamidine synthase II 31 766 2.4E-255 T 14-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 AMIS_1190 0d20a6907e96bfe8873fb6645a38e3f4 792 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 1 777 300.691 T 14-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 AMIS_1190 0d20a6907e96bfe8873fb6645a38e3f4 792 SUPERFAMILY SSF55326 421 591 6.28E-54 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AMIS_1190 0d20a6907e96bfe8873fb6645a38e3f4 792 Gene3D G3DSA:3.90.650.10 42 365 3.0E-124 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AMIS_1190 0d20a6907e96bfe8873fb6645a38e3f4 792 PIRSF PIRSF001587 15 769 2.5E-282 T 14-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 AMIS_1190 0d20a6907e96bfe8873fb6645a38e3f4 792 SUPERFAMILY SSF56042 215 452 7.63E-52 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AMIS_1190 0d20a6907e96bfe8873fb6645a38e3f4 792 Gene3D G3DSA:3.30.1330.10 58 208 3.0E-124 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AMIS_1190 0d20a6907e96bfe8873fb6645a38e3f4 792 Pfam PF00586 AIR synthase related protein, N-terminal domain 481 584 1.1E-22 T 14-10-2018 IPR016188 PurM-like, N-terminal domain AMIS_1190 0d20a6907e96bfe8873fb6645a38e3f4 792 Pfam PF00586 AIR synthase related protein, N-terminal domain 102 204 5.2E-22 T 14-10-2018 IPR016188 PurM-like, N-terminal domain AMIS_32730 1c66cea7a8f5dd983dd081478864eeef 114 Pfam PF05331 Protein of unknown function (DUF742) 7 96 6.4E-22 T 14-10-2018 IPR007995 Protein of unknown function DUF742 AMIS_51160 e6ff031ada54f8e0355e0b4bb69349aa 475 SUPERFAMILY SSF53720 3 474 1.13E-166 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMIS_51160 e6ff031ada54f8e0355e0b4bb69349aa 475 Pfam PF00171 Aldehyde dehydrogenase family 11 470 2.8E-167 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AMIS_51160 e6ff031ada54f8e0355e0b4bb69349aa 475 Gene3D G3DSA:3.40.309.10 254 443 6.2E-175 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AMIS_51160 e6ff031ada54f8e0355e0b4bb69349aa 475 Gene3D G3DSA:3.40.605.10 11 466 6.2E-175 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AMIS_51160 e6ff031ada54f8e0355e0b4bb69349aa 475 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 247 254 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AMIS_44420 1bf744cdd202e7d4050134d6b03df12d 135 Gene3D G3DSA:1.10.10.10 17 87 2.3E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_44420 1bf744cdd202e7d4050134d6b03df12d 135 SUPERFAMILY SSF46785 21 133 1.68E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_44420 1bf744cdd202e7d4050134d6b03df12d 135 Pfam PF03965 Penicillinase repressor 23 132 1.5E-18 T 14-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 AMIS_6110 7da52c50c8fdcccb03683a0811ba2543 77 Gene3D G3DSA:1.10.287.310 5 69 3.7E-25 T 14-10-2018 AMIS_6110 7da52c50c8fdcccb03683a0811ba2543 77 SUPERFAMILY SSF46561 5 67 2.75E-22 T 14-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_6110 7da52c50c8fdcccb03683a0811ba2543 77 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 5 64 16.847 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_6110 7da52c50c8fdcccb03683a0811ba2543 77 TIGRFAM TIGR00012 L29: ribosomal protein uL29 9 64 4.9E-20 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_6110 7da52c50c8fdcccb03683a0811ba2543 77 Pfam PF00831 Ribosomal L29 protein 8 64 4.0E-23 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_57320 c28ba91edeb95babe65b723a07580c47 247 PIRSF PIRSF015736 1 247 3.3E-61 T 14-10-2018 IPR026286 Maleate isomerase/Arylmalonate decarboxylase AMIS_57320 c28ba91edeb95babe65b723a07580c47 247 Gene3D G3DSA:3.40.50.12500 8 247 5.4E-65 T 14-10-2018 AMIS_54840 b1ed2f817bb7160d4bb4b068cd5e5e70 431 SUPERFAMILY SSF53383 11 421 5.98E-105 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_54840 b1ed2f817bb7160d4bb4b068cd5e5e70 431 Pfam PF00202 Aminotransferase class-III 24 421 3.5E-88 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMIS_54840 b1ed2f817bb7160d4bb4b068cd5e5e70 431 Gene3D G3DSA:3.90.1150.10 3 417 7.6E-122 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMIS_54840 b1ed2f817bb7160d4bb4b068cd5e5e70 431 Gene3D G3DSA:3.40.640.10 58 322 7.6E-122 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_54840 b1ed2f817bb7160d4bb4b068cd5e5e70 431 PIRSF PIRSF000521 118 424 5.0E-39 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMIS_54840 b1ed2f817bb7160d4bb4b068cd5e5e70 431 PIRSF PIRSF000521 23 128 3.1E-5 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMIS_75580 62ff0eb22c6b93d62236354e0ac095f1 385 SUPERFAMILY SSF52540 120 366 2.82E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_75580 62ff0eb22c6b93d62236354e0ac095f1 385 ProSitePatterns PS01215 Mrp family signature. 224 240 - T 14-10-2018 IPR000808 Mrp, conserved site GO:0005524 AMIS_75580 62ff0eb22c6b93d62236354e0ac095f1 385 Pfam PF01883 Iron-sulfur cluster assembly protein 12 84 1.1E-17 T 14-10-2018 IPR002744 MIP18 family-like AMIS_75580 62ff0eb22c6b93d62236354e0ac095f1 385 Gene3D G3DSA:3.40.50.300 115 364 6.9E-70 T 14-10-2018 AMIS_75580 62ff0eb22c6b93d62236354e0ac095f1 385 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 121 365 2.0E-89 T 14-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 AMIS_75580 62ff0eb22c6b93d62236354e0ac095f1 385 Hamap MF_02040 Iron-sulfur cluster carrier protein. 111 366 33.808 T 14-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein AMIS_75580 62ff0eb22c6b93d62236354e0ac095f1 385 Gene3D G3DSA:3.30.300.130 6 101 1.1E-18 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily AMIS_75580 62ff0eb22c6b93d62236354e0ac095f1 385 SUPERFAMILY SSF117916 10 96 6.54E-20 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily AMIS_74470 5c68b3bf5845f5407e4503f4b5f945af 1249 Gene3D G3DSA:3.30.200.20 6 97 1.9E-27 T 14-10-2018 AMIS_74470 5c68b3bf5845f5407e4503f4b5f945af 1249 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 20 43 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 AMIS_74470 5c68b3bf5845f5407e4503f4b5f945af 1249 Pfam PF00069 Protein kinase domain 15 264 6.6E-42 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMIS_74470 5c68b3bf5845f5407e4503f4b5f945af 1249 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 137 149 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 AMIS_74470 5c68b3bf5845f5407e4503f4b5f945af 1249 SUPERFAMILY SSF56112 6 286 3.91E-66 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMIS_74470 5c68b3bf5845f5407e4503f4b5f945af 1249 SMART SM00220 14 268 2.8E-56 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMIS_74470 5c68b3bf5845f5407e4503f4b5f945af 1249 Gene3D G3DSA:1.10.510.10 99 279 2.9E-39 T 14-10-2018 AMIS_45450 174dad33460aa89dbef3ecb50370b8b9 457 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 4 369 1.9E-57 T 14-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 AMIS_45450 174dad33460aa89dbef3ecb50370b8b9 457 Gene3D G3DSA:3.40.720.10 2 271 3.3E-39 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AMIS_45450 174dad33460aa89dbef3ecb50370b8b9 457 SUPERFAMILY SSF53649 3 376 1.03E-69 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AMIS_11720 50620cd834be609b885d0ce6a30b4344 375 SMART SM00729 5 229 1.8E-58 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AMIS_11720 50620cd834be609b885d0ce6a30b4344 375 SUPERFAMILY SSF102114 4 373 3.27E-112 T 14-10-2018 AMIS_11720 50620cd834be609b885d0ce6a30b4344 375 Gene3D G3DSA:3.80.30.20 2 305 6.5E-98 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe AMIS_11720 50620cd834be609b885d0ce6a30b4344 375 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 8 334 1.9E-82 T 14-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 AMIS_11720 50620cd834be609b885d0ce6a30b4344 375 Pfam PF04055 Radical SAM superfamily 10 183 3.5E-21 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMIS_62650 795bfadbf6dd739937415f0089a73cec 472 SUPERFAMILY SSF56112 17 279 1.62E-70 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMIS_62650 795bfadbf6dd739937415f0089a73cec 472 ProSitePatterns PS00109 Tyrosine protein kinases specific active-site signature. 144 156 - T 14-10-2018 IPR008266 Tyrosine-protein kinase, active site GO:0004672|GO:0006468 AMIS_62650 795bfadbf6dd739937415f0089a73cec 472 PIRSF PIRSF000654 32 285 1.5E-20 T 14-10-2018 AMIS_62650 795bfadbf6dd739937415f0089a73cec 472 Gene3D G3DSA:1.10.510.10 105 286 9.8E-45 T 14-10-2018 AMIS_62650 795bfadbf6dd739937415f0089a73cec 472 Pfam PF00069 Protein kinase domain 20 275 1.8E-42 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMIS_62650 795bfadbf6dd739937415f0089a73cec 472 Gene3D G3DSA:3.30.200.20 10 104 8.4E-32 T 14-10-2018 AMIS_62650 795bfadbf6dd739937415f0089a73cec 472 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 26 49 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 AMIS_40330 acbd3a2f6e85b8585fe7acc2ede0f3c8 226 SMART SM00448 2 112 1.6E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_40330 acbd3a2f6e85b8585fe7acc2ede0f3c8 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 221 1.1E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_40330 acbd3a2f6e85b8585fe7acc2ede0f3c8 226 SUPERFAMILY SSF52172 3 173 3.73E-35 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_40330 acbd3a2f6e85b8585fe7acc2ede0f3c8 226 Gene3D G3DSA:3.40.50.2300 1 119 6.7E-31 T 14-10-2018 AMIS_40330 acbd3a2f6e85b8585fe7acc2ede0f3c8 226 SMART SM00862 146 222 1.1E-27 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_40330 acbd3a2f6e85b8585fe7acc2ede0f3c8 226 Pfam PF00072 Response regulator receiver domain 5 112 8.8E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_40330 acbd3a2f6e85b8585fe7acc2ede0f3c8 226 Gene3D G3DSA:1.10.10.10 120 225 2.5E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_80620 f8d57ea4a1b0cc8e672c0fd7f277d1ad 179 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 43 141 1.3E-33 T 14-10-2018 IPR032093 Phospholipase D, N-terminal AMIS_80620 f8d57ea4a1b0cc8e672c0fd7f277d1ad 179 Gene3D G3DSA:2.60.40.380 35 144 3.9E-38 T 14-10-2018 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 AMIS_11920 dac92ed1be461f26d82fde917f576b38 98 SUPERFAMILY SSF89957 1 96 1.31E-27 T 14-10-2018 IPR029756 MTH1187/YkoF-like AMIS_11920 dac92ed1be461f26d82fde917f576b38 98 TIGRFAM TIGR00106 TIGR00106: uncharacterized protein, MTH1187 family 2 94 3.1E-16 T 14-10-2018 IPR002767 Thiamine-binding protein AMIS_11920 dac92ed1be461f26d82fde917f576b38 98 Gene3D G3DSA:3.30.70.930 1 97 1.8E-26 T 14-10-2018 IPR029756 MTH1187/YkoF-like AMIS_11920 dac92ed1be461f26d82fde917f576b38 98 Pfam PF01910 Thiamine-binding protein 3 91 3.5E-29 T 14-10-2018 IPR002767 Thiamine-binding protein AMIS_37950 8d4bd46e98590eeeb1e591fed8b3e93a 114 Pfam PF02148 Zn-finger in ubiquitin-hydrolases and other protein 16 78 1.1E-12 T 14-10-2018 IPR001607 Zinc finger, UBP-type GO:0008270 AMIS_37950 8d4bd46e98590eeeb1e591fed8b3e93a 114 SUPERFAMILY SSF57850 8 86 4.83E-27 T 14-10-2018 AMIS_37950 8d4bd46e98590eeeb1e591fed8b3e93a 114 Gene3D G3DSA:3.30.40.10 2 80 1.1E-24 T 14-10-2018 IPR013083 Zinc finger, RING/FYVE/PHD-type AMIS_33230 e43459089ef8191605b2c6983016c3c2 396 Pfam PF06772 Bacterial low temperature requirement A protein (LtrA) 26 377 2.8E-84 T 14-10-2018 IPR010640 Low temperature requirement A AMIS_56680 31ac6b9a9ff8a62de8145f9e4c123e7b 602 Gene3D G3DSA:3.40.50.720 277 560 4.6E-96 T 14-10-2018 AMIS_56680 31ac6b9a9ff8a62de8145f9e4c123e7b 602 SUPERFAMILY SSF51735 141 268 2.95E-14 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_56680 31ac6b9a9ff8a62de8145f9e4c123e7b 602 Gene3D G3DSA:3.40.50.720 138 263 1.5E-28 T 14-10-2018 AMIS_56680 31ac6b9a9ff8a62de8145f9e4c123e7b 602 Pfam PF13727 CoA-binding domain 111 219 2.2E-9 T 14-10-2018 AMIS_56680 31ac6b9a9ff8a62de8145f9e4c123e7b 602 Pfam PF02719 Polysaccharide biosynthesis protein 282 555 9.8E-94 T 14-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain AMIS_56680 31ac6b9a9ff8a62de8145f9e4c123e7b 602 SUPERFAMILY SSF51735 279 536 1.14E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_44790 3379f56b5b4b1302d72df63a2adf07c3 245 PIRSF PIRSF006648 4 245 4.8E-19 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AMIS_44790 3379f56b5b4b1302d72df63a2adf07c3 245 Pfam PF01061 ABC-2 type transporter 5 213 1.0E-25 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 AMIS_62000 3c0849824a37f4e2f7266285e920a523 225 PIRSF PIRSF001461 1 224 3.9E-87 T 14-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AMIS_62000 3c0849824a37f4e2f7266285e920a523 225 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 7 215 8.4E-77 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AMIS_62000 3c0849824a37f4e2f7266285e920a523 225 SUPERFAMILY SSF51366 5 216 2.47E-66 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AMIS_62000 3c0849824a37f4e2f7266285e920a523 225 Pfam PF00834 Ribulose-phosphate 3 epimerase family 7 202 7.2E-75 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AMIS_62000 3c0849824a37f4e2f7266285e920a523 225 Gene3D G3DSA:3.20.20.70 1 217 7.1E-83 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_62000 3c0849824a37f4e2f7266285e920a523 225 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AMIS_72120 2a0e04cea4a640f689c2af7941d5d1cb 346 Pfam PF09511 RNA ligase 54 172 3.8E-10 T 14-10-2018 IPR019039 RNA ligase T4 Rnl1, N-terminal AMIS_13690 f39fc5ecbce310e1fbed383159d6d9bb 115 Pfam PF06013 Proteins of 100 residues with WXG 7 88 2.9E-10 T 14-10-2018 IPR010310 Type VII secretion system ESAT-6-like AMIS_13690 f39fc5ecbce310e1fbed383159d6d9bb 115 SUPERFAMILY SSF140453 9 100 5.75E-13 T 14-10-2018 IPR036689 ESAT-6-like superfamily AMIS_13690 f39fc5ecbce310e1fbed383159d6d9bb 115 Gene3D G3DSA:1.10.287.1060 4 100 3.4E-12 T 14-10-2018 AMIS_53720 7f654b12f4ad3f52d64d6acb35c8cbbd 230 Pfam PF04228 Putative neutral zinc metallopeptidase 44 223 1.0E-7 T 14-10-2018 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative AMIS_4580 d3487bad9ca6e59e04d1e8ba682610d8 276 SUPERFAMILY SSF51735 4 271 8.92E-67 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_4580 d3487bad9ca6e59e04d1e8ba682610d8 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 1.1E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_4580 d3487bad9ca6e59e04d1e8ba682610d8 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 1.1E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_4580 d3487bad9ca6e59e04d1e8ba682610d8 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 1.1E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_4580 d3487bad9ca6e59e04d1e8ba682610d8 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 8.1E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_4580 d3487bad9ca6e59e04d1e8ba682610d8 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 8.1E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_4580 d3487bad9ca6e59e04d1e8ba682610d8 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 8.1E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_4580 d3487bad9ca6e59e04d1e8ba682610d8 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 8.1E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_4580 d3487bad9ca6e59e04d1e8ba682610d8 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 8.1E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_4580 d3487bad9ca6e59e04d1e8ba682610d8 276 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 194 7.3E-5 T 14-10-2018 AMIS_4580 d3487bad9ca6e59e04d1e8ba682610d8 276 Gene3D G3DSA:3.40.50.720 1 273 8.7E-69 T 14-10-2018 AMIS_4580 d3487bad9ca6e59e04d1e8ba682610d8 276 Pfam PF00106 short chain dehydrogenase 10 199 2.5E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_4580 d3487bad9ca6e59e04d1e8ba682610d8 276 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMIS_57300 7a83e837b1f17fba8c66df00c66cc65e 251 Pfam PF00106 short chain dehydrogenase 3 184 6.5E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_57300 7a83e837b1f17fba8c66df00c66cc65e 251 Gene3D G3DSA:3.40.50.720 1 240 6.9E-45 T 14-10-2018 AMIS_57300 7a83e837b1f17fba8c66df00c66cc65e 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 68 79 7.8E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_57300 7a83e837b1f17fba8c66df00c66cc65e 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 116 132 7.8E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_57300 7a83e837b1f17fba8c66df00c66cc65e 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 143 162 7.8E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_57300 7a83e837b1f17fba8c66df00c66cc65e 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 181 7.8E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_57300 7a83e837b1f17fba8c66df00c66cc65e 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 7.8E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_57300 7a83e837b1f17fba8c66df00c66cc65e 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 68 79 7.7E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_57300 7a83e837b1f17fba8c66df00c66cc65e 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 162 7.7E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_57300 7a83e837b1f17fba8c66df00c66cc65e 251 SUPERFAMILY SSF51735 2 194 8.0E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_9020 f9bfe80a48f3d5595d104914585b1d5e 259 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 13 95 2.8E-34 T 14-10-2018 IPR010627 Peptidase A24A, N-terminal AMIS_9020 f9bfe80a48f3d5595d104914585b1d5e 259 Pfam PF01478 Type IV leader peptidase family 107 214 1.2E-11 T 14-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 AMIS_41260 e3cd94fa367d365c09e588c73610da69 174 Pfam PF13563 2'-5' RNA ligase superfamily 16 155 1.3E-20 T 14-10-2018 AMIS_41260 e3cd94fa367d365c09e588c73610da69 174 SUPERFAMILY SSF55144 17 174 4.97E-17 T 14-10-2018 IPR009097 Cyclic phosphodiesterase AMIS_41260 e3cd94fa367d365c09e588c73610da69 174 Gene3D G3DSA:3.90.1140.10 7 174 1.7E-23 T 14-10-2018 AMIS_58400 91acdffdb29d7bad95e31ed625e6b776 287 Pfam PF00583 Acetyltransferase (GNAT) family 27 98 2.6E-7 T 14-10-2018 IPR000182 GNAT domain AMIS_58400 91acdffdb29d7bad95e31ed625e6b776 287 SUPERFAMILY SSF55729 18 102 1.72E-14 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_58400 91acdffdb29d7bad95e31ed625e6b776 287 Gene3D G3DSA:3.40.630.30 2 283 1.2E-64 T 14-10-2018 AMIS_58400 91acdffdb29d7bad95e31ed625e6b776 287 SUPERFAMILY SSF55729 147 278 2.52E-15 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_45660 c61fbf459b19630cebd9ae6633504d06 198 Gene3D G3DSA:1.10.3300.10 22 195 1.8E-23 T 14-10-2018 IPR023286 ABATE domain superfamily AMIS_45660 c61fbf459b19630cebd9ae6633504d06 198 SUPERFAMILY SSF160904 17 192 9.02E-40 T 14-10-2018 AMIS_45660 c61fbf459b19630cebd9ae6633504d06 198 Pfam PF11706 CGNR zinc finger 150 193 3.4E-17 T 14-10-2018 IPR021005 Zinc finger, CGNR AMIS_45660 c61fbf459b19630cebd9ae6633504d06 198 Pfam PF07336 Putative stress-induced transcription regulator 22 141 5.7E-19 T 14-10-2018 IPR010852 Putative stress-induced transcription regulator AMIS_13160 eb32772691ff6bdc4634f3256849cdb9 706 SUPERFAMILY SSF58104 411 704 6.93E-57 T 14-10-2018 AMIS_13160 eb32772691ff6bdc4634f3256849cdb9 706 Pfam PF00672 HAMP domain 392 439 1.6E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_13160 eb32772691ff6bdc4634f3256849cdb9 706 Pfam PF17201 Cache 3/Cache 2 fusion domain 39 360 1.7E-72 T 14-10-2018 IPR033462 Cache 3/Cache 2 fusion domain AMIS_13160 eb32772691ff6bdc4634f3256849cdb9 706 SMART SM00304 391 443 1.8E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_13160 eb32772691ff6bdc4634f3256849cdb9 706 Gene3D G3DSA:3.30.450.20 233 359 3.7E-7 T 14-10-2018 AMIS_13160 eb32772691ff6bdc4634f3256849cdb9 706 SMART SM00283 451 705 1.0E-46 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_13160 eb32772691ff6bdc4634f3256849cdb9 706 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 468 497 6.5E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_13160 eb32772691ff6bdc4634f3256849cdb9 706 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 626 655 6.5E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_13160 eb32772691ff6bdc4634f3256849cdb9 706 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 578 607 6.5E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_13160 eb32772691ff6bdc4634f3256849cdb9 706 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 549 576 6.5E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_13160 eb32772691ff6bdc4634f3256849cdb9 706 SUPERFAMILY SSF103190 126 239 1.41E-12 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily AMIS_13160 eb32772691ff6bdc4634f3256849cdb9 706 Gene3D G3DSA:1.10.287.950 391 706 1.5E-57 T 14-10-2018 AMIS_13160 eb32772691ff6bdc4634f3256849cdb9 706 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 509 674 3.5E-30 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_37810 e5d2cf4d6d06929ed4110191e9dbe24f 284 Gene3D G3DSA:3.30.460.10 25 137 4.6E-8 T 14-10-2018 AMIS_37810 e5d2cf4d6d06929ed4110191e9dbe24f 284 SUPERFAMILY SSF81301 31 83 1.17E-7 T 14-10-2018 AMIS_51510 e19f9979a11299a99e10c33a165a9494 334 Pfam PF00005 ABC transporter 19 163 8.8E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_51510 e19f9979a11299a99e10c33a165a9494 334 Gene3D G3DSA:3.40.50.300 1 252 1.8E-72 T 14-10-2018 AMIS_51510 e19f9979a11299a99e10c33a165a9494 334 SUPERFAMILY SSF52540 1 239 9.8E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_51510 e19f9979a11299a99e10c33a165a9494 334 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_51510 e19f9979a11299a99e10c33a165a9494 334 SMART SM00382 27 213 1.4E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_67290 6fb5869041a452fe574609628f1b2748 395 Gene3D G3DSA:2.40.10.10 83 177 1.3E-28 T 14-10-2018 AMIS_67290 6fb5869041a452fe574609628f1b2748 395 SMART SM00228 306 382 4.4E-19 T 14-10-2018 IPR001478 PDZ domain GO:0005515 AMIS_67290 6fb5869041a452fe574609628f1b2748 395 Gene3D G3DSA:2.30.42.10 303 395 1.6E-24 T 14-10-2018 AMIS_67290 6fb5869041a452fe574609628f1b2748 395 SUPERFAMILY SSF50156 288 390 8.68E-23 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 AMIS_67290 6fb5869041a452fe574609628f1b2748 395 Pfam PF13180 PDZ domain 317 391 2.5E-19 T 14-10-2018 IPR001478 PDZ domain GO:0005515 AMIS_67290 6fb5869041a452fe574609628f1b2748 395 PRINTS PR00834 HtrA/DegQ protease family signature 230 247 1.4E-41 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMIS_67290 6fb5869041a452fe574609628f1b2748 395 PRINTS PR00834 HtrA/DegQ protease family signature 148 168 1.4E-41 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMIS_67290 6fb5869041a452fe574609628f1b2748 395 PRINTS PR00834 HtrA/DegQ protease family signature 189 213 1.4E-41 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMIS_67290 6fb5869041a452fe574609628f1b2748 395 PRINTS PR00834 HtrA/DegQ protease family signature 340 352 1.4E-41 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMIS_67290 6fb5869041a452fe574609628f1b2748 395 PRINTS PR00834 HtrA/DegQ protease family signature 124 136 1.4E-41 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMIS_67290 6fb5869041a452fe574609628f1b2748 395 Pfam PF13365 Trypsin-like peptidase domain 115 259 1.0E-31 T 14-10-2018 AMIS_67290 6fb5869041a452fe574609628f1b2748 395 SUPERFAMILY SSF50494 84 314 4.82E-53 T 14-10-2018 IPR009003 Peptidase S1, PA clan AMIS_67290 6fb5869041a452fe574609628f1b2748 395 Gene3D G3DSA:2.40.10.10 179 302 2.0E-37 T 14-10-2018 AMIS_22860 fec8cbfa5581d7936dbb0788e3964858 158 Pfam PF04266 ASCH domain 35 146 3.5E-15 T 14-10-2018 IPR007374 ASCH domain AMIS_22860 fec8cbfa5581d7936dbb0788e3964858 158 SMART SM01022 25 147 4.0E-24 T 14-10-2018 IPR007374 ASCH domain AMIS_22860 fec8cbfa5581d7936dbb0788e3964858 158 SUPERFAMILY SSF88697 20 148 1.12E-34 T 14-10-2018 IPR015947 PUA-like superfamily AMIS_22860 fec8cbfa5581d7936dbb0788e3964858 158 PIRSF PIRSF021320 4 150 4.2E-33 T 14-10-2018 IPR009326 Protein of unknown function DUF984 AMIS_22860 fec8cbfa5581d7936dbb0788e3964858 158 Gene3D G3DSA:3.10.400.10 9 156 1.7E-41 T 14-10-2018 AMIS_59690 a1a83af1c42241dd5fd3a7ca6e4ea0f9 642 Pfam PF02653 Branched-chain amino acid transport system / permease component 350 619 7.4E-24 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 AMIS_59690 a1a83af1c42241dd5fd3a7ca6e4ea0f9 642 Pfam PF02653 Branched-chain amino acid transport system / permease component 16 298 1.1E-12 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 AMIS_18840 5b8a2b6684751989967b1051590fe994 393 SUPERFAMILY SSF53756 17 377 1.19E-68 T 14-10-2018 AMIS_18840 5b8a2b6684751989967b1051590fe994 393 Gene3D G3DSA:3.40.50.2000 18 374 1.7E-57 T 14-10-2018 AMIS_18840 5b8a2b6684751989967b1051590fe994 393 Pfam PF00534 Glycosyl transferases group 1 204 357 8.1E-31 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 AMIS_18840 5b8a2b6684751989967b1051590fe994 393 Pfam PF13579 Glycosyl transferase 4-like domain 23 190 4.4E-21 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AMIS_18840 5b8a2b6684751989967b1051590fe994 393 Gene3D G3DSA:3.40.50.2000 191 360 1.7E-57 T 14-10-2018 AMIS_21300 17af4d485d268b1e379bb59ef04cb876 81 Gene3D G3DSA:1.10.10.10 8 72 4.9E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_21300 17af4d485d268b1e379bb59ef04cb876 81 SUPERFAMILY SSF46785 9 74 3.1E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_21300 17af4d485d268b1e379bb59ef04cb876 81 Pfam PF01726 LexA DNA binding domain 8 69 9.4E-14 T 14-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 AMIS_19320 88bf3aaa5945b67e477611e4981c2840 373 SUPERFAMILY SSF53901 251 372 1.41E-39 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_19320 88bf3aaa5945b67e477611e4981c2840 373 Gene3D G3DSA:3.40.47.10 127 367 2.2E-125 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_19320 88bf3aaa5945b67e477611e4981c2840 373 ProSitePatterns PS00737 Thiolases signature 2. 319 335 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 AMIS_19320 88bf3aaa5945b67e477611e4981c2840 373 Pfam PF02803 Thiolase, C-terminal domain 251 372 1.0E-39 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 AMIS_19320 88bf3aaa5945b67e477611e4981c2840 373 Gene3D G3DSA:3.40.47.10 11 256 2.2E-125 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_19320 88bf3aaa5945b67e477611e4981c2840 373 SUPERFAMILY SSF53901 10 250 9.31E-59 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_19320 88bf3aaa5945b67e477611e4981c2840 373 Pfam PF00108 Thiolase, N-terminal domain 10 242 1.4E-49 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 AMIS_19320 88bf3aaa5945b67e477611e4981c2840 373 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 11 371 3.0E-111 T 14-10-2018 IPR002155 Thiolase GO:0016747 AMIS_19320 88bf3aaa5945b67e477611e4981c2840 373 PIRSF PIRSF000429 5 373 2.6E-112 T 14-10-2018 IPR002155 Thiolase GO:0016747 AMIS_80900 6ab4f7170951a63898baa0771217825d 184 SUPERFAMILY SSF50249 6 184 2.34E-47 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMIS_80900 6ab4f7170951a63898baa0771217825d 184 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 5 184 1.4E-32 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AMIS_80900 6ab4f7170951a63898baa0771217825d 184 Gene3D G3DSA:2.40.50.140 1 120 7.7E-43 T 14-10-2018 AMIS_80900 6ab4f7170951a63898baa0771217825d 184 Hamap MF_00984 Single-stranded DNA-binding protein. 4 113 29.938 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AMIS_80900 6ab4f7170951a63898baa0771217825d 184 Pfam PF00436 Single-strand binding protein family 6 106 5.0E-28 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 AMIS_27280 41e9915a8650fbab9057053aa6cef170 433 SUPERFAMILY SSF53383 6 424 3.06E-102 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_27280 41e9915a8650fbab9057053aa6cef170 433 Pfam PF00202 Aminotransferase class-III 34 399 5.6E-65 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMIS_27280 41e9915a8650fbab9057053aa6cef170 433 Gene3D G3DSA:3.40.640.10 72 320 2.8E-134 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_27280 41e9915a8650fbab9057053aa6cef170 433 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 238 275 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMIS_27280 41e9915a8650fbab9057053aa6cef170 433 Gene3D G3DSA:3.90.1150.10 14 418 2.8E-134 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMIS_6570 7ee2603bd5f6e34e3a0f296d772fd3e2 169 SUPERFAMILY SSF54211 45 169 8.34E-45 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMIS_6570 7ee2603bd5f6e34e3a0f296d772fd3e2 169 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 40 169 32.236 T 14-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid AMIS_6570 7ee2603bd5f6e34e3a0f296d772fd3e2 169 Pfam PF00380 Ribosomal protein S9/S16 49 169 1.8E-43 T 14-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 AMIS_6570 7ee2603bd5f6e34e3a0f296d772fd3e2 169 ProSitePatterns PS00360 Ribosomal protein S9 signature. 108 126 - T 14-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 AMIS_6570 7ee2603bd5f6e34e3a0f296d772fd3e2 169 Gene3D G3DSA:3.30.230.10 44 169 1.8E-48 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMIS_44950 e8c1c92b8182ee029e027998008f664e 99 Pfam PF03795 YCII-related domain 33 68 3.5E-4 T 14-10-2018 IPR005545 YCII-related AMIS_44950 e8c1c92b8182ee029e027998008f664e 99 Gene3D G3DSA:3.30.70.1060 1 89 4.5E-14 T 14-10-2018 AMIS_44950 e8c1c92b8182ee029e027998008f664e 99 SUPERFAMILY SSF54909 5 74 2.2E-12 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel AMIS_28590 8682dd8c94ea861d90a9c6df02a78adc 482 Pfam PF13191 AAA ATPase domain 2 129 1.1E-8 T 14-10-2018 AMIS_28590 8682dd8c94ea861d90a9c6df02a78adc 482 Pfam PF03008 Archaea bacterial proteins of unknown function 345 424 1.1E-4 T 14-10-2018 IPR004256 Domain of unknown function DUF234, DEXX-box ATPase C-terminal AMIS_28590 8682dd8c94ea861d90a9c6df02a78adc 482 Gene3D G3DSA:3.40.50.300 1 181 6.3E-20 T 14-10-2018 AMIS_28590 8682dd8c94ea861d90a9c6df02a78adc 482 SUPERFAMILY SSF52540 1 211 2.18E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_26370 b8d3ec35961e79775685886d7687cd1e 533 Gene3D G3DSA:3.40.50.1820 33 533 2.7E-117 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_26370 b8d3ec35961e79775685886d7687cd1e 533 SUPERFAMILY SSF53474 39 531 8.7E-100 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_26370 b8d3ec35961e79775685886d7687cd1e 533 ProSitePatterns PS00941 Carboxylesterases type-B signature 2. 114 124 - T 14-10-2018 IPR019819 Carboxylesterase type B, conserved site AMIS_26370 b8d3ec35961e79775685886d7687cd1e 533 Pfam PF00135 Carboxylesterase family 38 515 4.8E-88 T 14-10-2018 IPR002018 Carboxylesterase, type B AMIS_26370 b8d3ec35961e79775685886d7687cd1e 533 ProSitePatterns PS00122 Carboxylesterases type-B serine active site. 207 222 - T 14-10-2018 IPR019826 Carboxylesterase type B, active site AMIS_67920 dc0c7cc011fadc3f2e7a43380d9d3ed9 829 Pfam PF13476 AAA domain 5 217 4.9E-18 T 14-10-2018 IPR038729 Rad50/SbcC-type AAA domain AMIS_67920 dc0c7cc011fadc3f2e7a43380d9d3ed9 829 Gene3D G3DSA:3.40.50.300 1 400 2.4E-35 T 14-10-2018 AMIS_67920 dc0c7cc011fadc3f2e7a43380d9d3ed9 829 SUPERFAMILY SSF52540 1 822 1.9E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_67920 dc0c7cc011fadc3f2e7a43380d9d3ed9 829 Gene3D G3DSA:3.40.50.300 608 827 3.5E-24 T 14-10-2018 AMIS_67920 dc0c7cc011fadc3f2e7a43380d9d3ed9 829 Pfam PF13558 Putative exonuclease SbcCD, C subunit 720 786 2.4E-12 T 14-10-2018 AMIS_10110 6555397f2ee850b80cd4e68b088bb391 112 SUPERFAMILY SSF50346 19 56 4.08E-5 T 14-10-2018 IPR011033 PRC-barrel-like superfamily AMIS_4450 28afe0f84939c3b5462b195f3a0af8de 353 Pfam PF00535 Glycosyl transferase family 2 6 134 3.9E-30 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AMIS_4450 28afe0f84939c3b5462b195f3a0af8de 353 Gene3D G3DSA:3.90.550.10 4 200 7.6E-39 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_4450 28afe0f84939c3b5462b195f3a0af8de 353 SUPERFAMILY SSF53448 4 222 4.5E-43 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_35330 36a54fcf1100d5be785eda1127d24db0 176 Gene3D G3DSA:3.40.630.30 2 176 6.0E-45 T 14-10-2018 AMIS_35330 36a54fcf1100d5be785eda1127d24db0 176 SUPERFAMILY SSF55729 4 171 2.16E-42 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_35330 36a54fcf1100d5be785eda1127d24db0 176 Pfam PF13302 Acetyltransferase (GNAT) domain 9 146 5.5E-28 T 14-10-2018 IPR000182 GNAT domain AMIS_5200 243998ad3141585b854ac29f93766350 150 SUPERFAMILY SSF52172 10 137 6.55E-33 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_5200 243998ad3141585b854ac29f93766350 150 Gene3D G3DSA:3.40.50.2300 2 149 6.9E-38 T 14-10-2018 AMIS_5200 243998ad3141585b854ac29f93766350 150 Pfam PF00072 Response regulator receiver domain 13 133 2.0E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_5200 243998ad3141585b854ac29f93766350 150 SMART SM00448 11 133 1.3E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_66880 c7d3828e25fb5c30520dfa4ae704b4ab 748 SUPERFAMILY SSF82866 158 354 3.79E-30 T 14-10-2018 AMIS_66880 c7d3828e25fb5c30520dfa4ae704b4ab 748 Gene3D G3DSA:1.20.1640.10 162 356 9.2E-8 T 14-10-2018 AMIS_66880 c7d3828e25fb5c30520dfa4ae704b4ab 748 SUPERFAMILY SSF82866 516 730 6.02E-29 T 14-10-2018 AMIS_66880 c7d3828e25fb5c30520dfa4ae704b4ab 748 Pfam PF03176 MMPL family 64 385 3.6E-44 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 AMIS_66880 c7d3828e25fb5c30520dfa4ae704b4ab 748 Pfam PF03176 MMPL family 414 731 5.0E-35 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 AMIS_6440 c63d764e2bebed9832dc1cbe01d6a739 507 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 58 481 5.4E-209 T 14-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AMIS_6440 c63d764e2bebed9832dc1cbe01d6a739 507 Gene3D G3DSA:3.20.20.540 101 414 1.7E-149 T 14-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AMIS_6440 c63d764e2bebed9832dc1cbe01d6a739 507 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 57 483 96.52 T 14-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AMIS_6440 c63d764e2bebed9832dc1cbe01d6a739 507 Pfam PF01964 Radical SAM ThiC family 58 478 6.0E-200 T 14-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AMIS_6440 c63d764e2bebed9832dc1cbe01d6a739 507 Pfam PF13667 ThiC-associated domain 3 56 2.2E-8 T 14-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AMIS_35610 9da36619904178cba63e98d16b28f7af 160 Gene3D G3DSA:3.40.630.30 1 156 1.1E-40 T 14-10-2018 AMIS_35610 9da36619904178cba63e98d16b28f7af 160 SUPERFAMILY SSF55729 1 154 1.31E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_35610 9da36619904178cba63e98d16b28f7af 160 Pfam PF00583 Acetyltransferase (GNAT) family 29 130 6.3E-13 T 14-10-2018 IPR000182 GNAT domain AMIS_76440 fa5618181fda282ab0d84c99f867de12 263 Pfam PF01618 MotA/TolQ/ExbB proton channel family 101 219 1.6E-26 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel AMIS_76440 fa5618181fda282ab0d84c99f867de12 263 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 185 202 - T 14-10-2018 IPR000540 Flagellar motor protein MotA, conserved site AMIS_53430 c527551ccd3a41f837baa63ea0a874da 276 SUPERFAMILY SSF55874 174 267 1.29E-5 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_53430 c527551ccd3a41f837baa63ea0a874da 276 Gene3D G3DSA:3.30.750.24 17 134 9.1E-6 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_53430 c527551ccd3a41f837baa63ea0a874da 276 Gene3D G3DSA:3.30.565.10 138 275 2.6E-18 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_12260 f2c22442b385b1137bc418cd6a6d3515 307 SUPERFAMILY SSF52540 4 227 1.0E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_12260 f2c22442b385b1137bc418cd6a6d3515 307 SMART SM00382 29 220 2.8E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_12260 f2c22442b385b1137bc418cd6a6d3515 307 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_12260 f2c22442b385b1137bc418cd6a6d3515 307 Pfam PF00005 ABC transporter 21 163 1.6E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_12260 f2c22442b385b1137bc418cd6a6d3515 307 Gene3D G3DSA:3.40.50.300 2 238 2.0E-70 T 14-10-2018 AMIS_55590 c1e88fbfa6a5e6d5fcfcaa915218e163 185 SUPERFAMILY SSF46689 3 73 1.84E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_55590 c1e88fbfa6a5e6d5fcfcaa915218e163 185 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 4.7E-15 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_55590 c1e88fbfa6a5e6d5fcfcaa915218e163 185 Gene3D G3DSA:1.10.357.10 2 178 6.4E-26 T 14-10-2018 AMIS_55590 c1e88fbfa6a5e6d5fcfcaa915218e163 185 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 1.2E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_55590 c1e88fbfa6a5e6d5fcfcaa915218e163 185 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 1.2E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_22170 2d695a5cce938cf1ab2ef6b3dc3d8bf0 175 Gene3D G3DSA:1.10.1740.10 19 97 3.0E-8 T 14-10-2018 AMIS_22170 2d695a5cce938cf1ab2ef6b3dc3d8bf0 175 Gene3D G3DSA:1.10.10.10 109 175 1.2E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_22170 2d695a5cce938cf1ab2ef6b3dc3d8bf0 175 SUPERFAMILY SSF88659 114 171 1.36E-13 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_22170 2d695a5cce938cf1ab2ef6b3dc3d8bf0 175 Pfam PF08281 Sigma-70, region 4 117 167 1.5E-14 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_22170 2d695a5cce938cf1ab2ef6b3dc3d8bf0 175 SUPERFAMILY SSF88946 23 102 9.81E-13 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_22170 2d695a5cce938cf1ab2ef6b3dc3d8bf0 175 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 24 169 2.2E-13 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_30010 84e28a4eba5d7e58ef2a267d511c470d 145 Gene3D G3DSA:3.40.50.2300 4 139 8.3E-24 T 14-10-2018 AMIS_30010 84e28a4eba5d7e58ef2a267d511c470d 145 SMART SM00448 8 130 2.2E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_30010 84e28a4eba5d7e58ef2a267d511c470d 145 Pfam PF00072 Response regulator receiver domain 11 130 3.0E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_30010 84e28a4eba5d7e58ef2a267d511c470d 145 SUPERFAMILY SSF52172 8 133 8.68E-26 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_71420 649699dddad8777103cc9b2f85a2f8e3 394 Pfam PF00266 Aminotransferase class-V 6 373 3.7E-62 T 14-10-2018 IPR000192 Aminotransferase class V domain AMIS_71420 649699dddad8777103cc9b2f85a2f8e3 394 PIRSF PIRSF005572 2 387 3.7E-115 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 AMIS_71420 649699dddad8777103cc9b2f85a2f8e3 394 SUPERFAMILY SSF53383 5 382 2.5E-98 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_71420 649699dddad8777103cc9b2f85a2f8e3 394 Gene3D G3DSA:3.40.640.10 16 263 1.4E-140 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_71420 649699dddad8777103cc9b2f85a2f8e3 394 Gene3D G3DSA:3.90.1150.10 6 375 1.4E-140 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMIS_33670 b0609827584ee8f33ee84e422c13da09 349 Gene3D G3DSA:3.40.50.10740 3 154 1.6E-50 T 14-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal AMIS_33670 b0609827584ee8f33ee84e422c13da09 349 Pfam PF02016 LD-carboxypeptidase 12 315 1.9E-75 T 14-10-2018 IPR003507 Peptidase family S66 AMIS_33670 b0609827584ee8f33ee84e422c13da09 349 SUPERFAMILY SSF141986 203 321 3.27E-34 T 14-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily AMIS_33670 b0609827584ee8f33ee84e422c13da09 349 PIRSF PIRSF028757 1 328 4.4E-72 T 14-10-2018 IPR003507 Peptidase family S66 AMIS_33670 b0609827584ee8f33ee84e422c13da09 349 Gene3D G3DSA:3.50.30.60 201 322 3.1E-35 T 14-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily AMIS_33670 b0609827584ee8f33ee84e422c13da09 349 SUPERFAMILY SSF52317 2 146 1.42E-44 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_66130 5d3fca978ae027604327e8b1097a92f7 234 SUPERFAMILY SSF46689 3 64 8.72E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_66130 5d3fca978ae027604327e8b1097a92f7 234 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 53 7.2E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_66130 5d3fca978ae027604327e8b1097a92f7 234 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 10 23 7.2E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_66130 5d3fca978ae027604327e8b1097a92f7 234 Gene3D G3DSA:1.10.357.10 2 199 9.3E-17 T 14-10-2018 AMIS_66130 5d3fca978ae027604327e8b1097a92f7 234 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 52 2.4E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_44900 dedb73a7dec0a2bf3ff70bfb03c0a878 767 ProSitePatterns PS00523 Sulfatases signature 1. 85 97 - T 14-10-2018 IPR024607 Sulfatase, conserved site AMIS_44900 dedb73a7dec0a2bf3ff70bfb03c0a878 767 Pfam PF00884 Sulfatase 41 460 1.7E-73 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 AMIS_44900 dedb73a7dec0a2bf3ff70bfb03c0a878 767 Gene3D G3DSA:3.40.720.10 38 486 3.9E-99 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AMIS_44900 dedb73a7dec0a2bf3ff70bfb03c0a878 767 SUPERFAMILY SSF53649 40 570 1.25E-116 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AMIS_44900 dedb73a7dec0a2bf3ff70bfb03c0a878 767 Gene3D G3DSA:3.30.1120.10 491 583 3.1E-20 T 14-10-2018 AMIS_50790 c05cea3dbdacd9c6c78391ed300badee 279 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 12 84 1.7E-28 T 14-10-2018 IPR025161 Putative transposase IS4/IS5 family AMIS_50790 c05cea3dbdacd9c6c78391ed300badee 279 Pfam PF01609 Transposase DDE domain 102 249 1.2E-16 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AMIS_30560 c05cea3dbdacd9c6c78391ed300badee 279 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 12 84 1.7E-28 T 14-10-2018 IPR025161 Putative transposase IS4/IS5 family AMIS_30560 c05cea3dbdacd9c6c78391ed300badee 279 Pfam PF01609 Transposase DDE domain 102 249 1.2E-16 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AMIS_68770 34b4f6c87cdacfab9a36c78c3a7ddba9 647 Gene3D G3DSA:1.10.287.950 330 646 9.0E-40 T 14-10-2018 AMIS_68770 34b4f6c87cdacfab9a36c78c3a7ddba9 647 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 100 129 7.5E-19 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_68770 34b4f6c87cdacfab9a36c78c3a7ddba9 647 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 203 232 7.5E-19 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_68770 34b4f6c87cdacfab9a36c78c3a7ddba9 647 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 174 201 7.5E-19 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_68770 34b4f6c87cdacfab9a36c78c3a7ddba9 647 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 155 290 1.1E-31 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_68770 34b4f6c87cdacfab9a36c78c3a7ddba9 647 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 448 602 1.1E-25 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_68770 34b4f6c87cdacfab9a36c78c3a7ddba9 647 Gene3D G3DSA:1.10.287.950 31 329 6.7E-43 T 14-10-2018 AMIS_68770 34b4f6c87cdacfab9a36c78c3a7ddba9 647 SUPERFAMILY SSF58104 69 346 4.19E-45 T 14-10-2018 AMIS_68770 34b4f6c87cdacfab9a36c78c3a7ddba9 647 SUPERFAMILY SSF58104 381 645 5.69E-41 T 14-10-2018 AMIS_68770 34b4f6c87cdacfab9a36c78c3a7ddba9 647 SMART SM00283 376 644 1.1E-23 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_68770 34b4f6c87cdacfab9a36c78c3a7ddba9 647 SMART SM00283 76 371 6.6E-33 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_79440 98553ebd551ba3155f8fca62ca9ea15c 682 Pfam PF13191 AAA ATPase domain 29 105 1.5E-9 T 14-10-2018 AMIS_79440 98553ebd551ba3155f8fca62ca9ea15c 682 Gene3D G3DSA:3.40.50.300 16 133 3.4E-9 T 14-10-2018 AMIS_79440 98553ebd551ba3155f8fca62ca9ea15c 682 SUPERFAMILY SSF52540 25 228 2.83E-16 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_46810 9b4ebc6edc238e5ad472035c456d4a34 328 SUPERFAMILY SSF51412 4 309 6.96E-44 T 14-10-2018 AMIS_46810 9b4ebc6edc238e5ad472035c456d4a34 328 Pfam PF03060 Nitronate monooxygenase 4 326 1.7E-80 T 14-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 AMIS_46810 9b4ebc6edc238e5ad472035c456d4a34 328 Gene3D G3DSA:3.20.20.70 3 328 2.3E-95 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_81010 08d36b1ebf78ce4a1b91d51c33b1ce69 174 SUPERFAMILY SSF88946 9 91 1.02E-12 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_81010 08d36b1ebf78ce4a1b91d51c33b1ce69 174 Gene3D G3DSA:1.10.1740.10 2 82 3.6E-10 T 14-10-2018 AMIS_81010 08d36b1ebf78ce4a1b91d51c33b1ce69 174 Pfam PF04542 Sigma-70 region 2 15 80 1.7E-10 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_81010 08d36b1ebf78ce4a1b91d51c33b1ce69 174 SUPERFAMILY SSF88659 100 161 3.36E-16 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_81010 08d36b1ebf78ce4a1b91d51c33b1ce69 174 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 11 159 3.6E-24 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_81010 08d36b1ebf78ce4a1b91d51c33b1ce69 174 TIGRFAM TIGR02983 SigE-fam_strep: RNA polymerase sigma-70 factor, sigma-E family 7 163 1.2E-51 T 14-10-2018 IPR014325 RNA polymerase sigma-E factor, actinobacteria GO:0016987 AMIS_81010 08d36b1ebf78ce4a1b91d51c33b1ce69 174 Gene3D G3DSA:1.10.10.10 84 163 4.9E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_81010 08d36b1ebf78ce4a1b91d51c33b1ce69 174 Pfam PF08281 Sigma-70, region 4 104 157 3.2E-17 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_22550 a654cf4fb91c1e59a3295d47b74a2a57 282 SUPERFAMILY SSF75005 66 267 1.2E-19 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMIS_22550 a654cf4fb91c1e59a3295d47b74a2a57 282 Gene3D G3DSA:2.115.10.20 64 240 4.3E-14 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMIS_22550 a654cf4fb91c1e59a3295d47b74a2a57 282 Pfam PF04616 Glycosyl hydrolases family 43 67 238 5.1E-10 T 14-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 AMIS_17380 d69c2cb70b22ec2b6c6f6d0f258c4437 337 SUPERFAMILY SSF53300 42 172 2.97E-10 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMIS_17380 d69c2cb70b22ec2b6c6f6d0f258c4437 337 Gene3D G3DSA:3.40.50.410 45 208 3.1E-8 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMIS_34350 5e14744266f4318f30fd11c4c40e62f8 147 Gene3D G3DSA:3.10.450.50 24 145 3.2E-27 T 14-10-2018 AMIS_34350 5e14744266f4318f30fd11c4c40e62f8 147 SUPERFAMILY SSF54427 29 144 1.07E-24 T 14-10-2018 IPR032710 NTF2-like domain superfamily AMIS_34350 5e14744266f4318f30fd11c4c40e62f8 147 Pfam PF14534 Domain of unknown function (DUF4440) 34 139 1.1E-19 T 14-10-2018 IPR027843 Domain of unknown function DUF4440 AMIS_65370 bcd13495ff8a46e8ab0f35ac30ed2d30 265 Pfam PF12697 Alpha/beta hydrolase family 29 232 1.8E-17 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_65370 bcd13495ff8a46e8ab0f35ac30ed2d30 265 SUPERFAMILY SSF53474 4 245 4.32E-42 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_65370 bcd13495ff8a46e8ab0f35ac30ed2d30 265 Gene3D G3DSA:3.40.50.1820 3 246 4.3E-41 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_65370 bcd13495ff8a46e8ab0f35ac30ed2d30 265 PRINTS PR00111 Alpha/beta hydrolase fold signature 110 123 1.9E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_65370 bcd13495ff8a46e8ab0f35ac30ed2d30 265 PRINTS PR00111 Alpha/beta hydrolase fold signature 96 109 1.9E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_65370 bcd13495ff8a46e8ab0f35ac30ed2d30 265 PRINTS PR00111 Alpha/beta hydrolase fold signature 52 67 1.9E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_5130 5b0a7a6a3b75ce0622f7ab1fc765f842 274 Gene3D G3DSA:1.10.10.10 176 274 4.8E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_5130 5b0a7a6a3b75ce0622f7ab1fc765f842 274 Pfam PF00072 Response regulator receiver domain 51 160 4.3E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_5130 5b0a7a6a3b75ce0622f7ab1fc765f842 274 SMART SM00448 49 160 4.3E-44 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_5130 5b0a7a6a3b75ce0622f7ab1fc765f842 274 SMART SM00862 196 270 1.5E-25 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_5130 5b0a7a6a3b75ce0622f7ab1fc765f842 274 Pfam PF00486 Transcriptional regulatory protein, C terminal 198 270 1.3E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_5130 5b0a7a6a3b75ce0622f7ab1fc765f842 274 SUPERFAMILY SSF52172 47 226 2.85E-42 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_5130 5b0a7a6a3b75ce0622f7ab1fc765f842 274 Gene3D G3DSA:3.40.50.2300 33 175 4.4E-38 T 14-10-2018 AMIS_31420 57fc5f0c38b112abb4fc73d7106677c9 154 Gene3D G3DSA:1.20.1260.50 1 152 1.3E-53 T 14-10-2018 AMIS_55470 6113fc3f135663855e5b7bc903e575d6 433 SUPERFAMILY SSF53850 34 408 5.27E-59 T 14-10-2018 AMIS_55470 6113fc3f135663855e5b7bc903e575d6 433 Pfam PF01547 Bacterial extracellular solute-binding protein 42 331 1.7E-31 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein AMIS_55470 6113fc3f135663855e5b7bc903e575d6 433 Gene3D G3DSA:3.40.190.10 51 351 4.5E-115 T 14-10-2018 AMIS_55470 6113fc3f135663855e5b7bc903e575d6 433 Gene3D G3DSA:3.40.190.10 145 405 4.5E-115 T 14-10-2018 AMIS_14970 dc366140cc54faae4e958394b55ebb86 396 SUPERFAMILY SSF103473 9 385 3.31E-21 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_14970 dc366140cc54faae4e958394b55ebb86 396 Gene3D G3DSA:1.20.1250.20 7 383 2.0E-21 T 14-10-2018 AMIS_60060 7468855968882528497265976669584c 219 SUPERFAMILY SSF48498 68 212 1.22E-27 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_60060 7468855968882528497265976669584c 219 Gene3D G3DSA:1.10.10.60 3 67 1.5E-25 T 14-10-2018 AMIS_60060 7468855968882528497265976669584c 219 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 56 1.9E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_60060 7468855968882528497265976669584c 219 Gene3D G3DSA:1.10.357.10 68 208 3.4E-27 T 14-10-2018 AMIS_60060 7468855968882528497265976669584c 219 SUPERFAMILY SSF46689 7 66 3.95E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_60060 7468855968882528497265976669584c 219 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 69 205 6.8E-16 T 14-10-2018 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 AMIS_60060 7468855968882528497265976669584c 219 PRINTS PR00400 Tetracycline repressor protein signature 189 203 6.0E-9 T 14-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 AMIS_60060 7468855968882528497265976669584c 219 PRINTS PR00400 Tetracycline repressor protein signature 24 47 6.0E-9 T 14-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 AMIS_60060 7468855968882528497265976669584c 219 PRINTS PR00400 Tetracycline repressor protein signature 75 94 6.0E-9 T 14-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 AMIS_50280 12e2eb1df3d9dd79f4a2062c00bd6b88 184 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 9.8E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_50280 12e2eb1df3d9dd79f4a2062c00bd6b88 184 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 9.8E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_50280 12e2eb1df3d9dd79f4a2062c00bd6b88 184 SUPERFAMILY SSF46689 3 83 1.44E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_50280 12e2eb1df3d9dd79f4a2062c00bd6b88 184 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 60 1.5E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_50280 12e2eb1df3d9dd79f4a2062c00bd6b88 184 Gene3D G3DSA:1.10.357.10 1 180 1.3E-27 T 14-10-2018 AMIS_1910 68d53d1d64fe3efab6c6eaf6dc9fb9d4 320 Pfam PF01578 Cytochrome C assembly protein 102 313 5.6E-40 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AMIS_1910 68d53d1d64fe3efab6c6eaf6dc9fb9d4 320 TIGRFAM TIGR03144 cytochr_II_ccsB: cytochrome c-type biogenesis protein CcsB 79 316 3.9E-65 T 14-10-2018 IPR017562 Cytochrome c-type biogenesis protein CcsA GO:0017004 AMIS_8600 dec8e033e2fe8fcb08e5c64b09692aca 314 Gene3D G3DSA:3.20.20.370 84 311 1.1E-56 T 14-10-2018 AMIS_8600 dec8e033e2fe8fcb08e5c64b09692aca 314 Pfam PF01522 Polysaccharide deacetylase 123 244 9.9E-31 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMIS_8600 dec8e033e2fe8fcb08e5c64b09692aca 314 SUPERFAMILY SSF88713 122 308 1.61E-50 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AMIS_44360 f834193f7deb06200a206d8914bebd20 143 Gene3D G3DSA:2.170.16.10 38 140 1.3E-21 T 14-10-2018 AMIS_44360 f834193f7deb06200a206d8914bebd20 143 SUPERFAMILY SSF51294 41 125 4.71E-12 T 14-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AMIS_44360 f834193f7deb06200a206d8914bebd20 143 Pfam PF07591 Pretoxin HINT domain 51 134 2.0E-9 T 14-10-2018 AMIS_27770 71f75ffd2f88acdd66e329f06d3264b7 530 SUPERFAMILY SSF56024 15 235 7.22E-17 T 14-10-2018 AMIS_27770 71f75ffd2f88acdd66e329f06d3264b7 530 Gene3D G3DSA:3.30.870.10 297 461 9.6E-17 T 14-10-2018 AMIS_27770 71f75ffd2f88acdd66e329f06d3264b7 530 Pfam PF00614 Phospholipase D Active site motif 155 182 5.6E-5 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AMIS_27770 71f75ffd2f88acdd66e329f06d3264b7 530 SMART SM00155 154 184 0.34 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AMIS_27770 71f75ffd2f88acdd66e329f06d3264b7 530 SMART SM00155 403 430 8.4E-5 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AMIS_27770 71f75ffd2f88acdd66e329f06d3264b7 530 Pfam PF13091 PLD-like domain 313 434 1.2E-9 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AMIS_27770 71f75ffd2f88acdd66e329f06d3264b7 530 SUPERFAMILY SSF56024 296 453 1.86E-22 T 14-10-2018 AMIS_27770 71f75ffd2f88acdd66e329f06d3264b7 530 Gene3D G3DSA:3.30.870.10 55 248 1.9E-14 T 14-10-2018 AMIS_74350 503c4e81d295e7701f146cd15ebd94e7 257 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 25 257 35.193 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AMIS_74350 503c4e81d295e7701f146cd15ebd94e7 257 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 202 219 - T 14-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 AMIS_74350 503c4e81d295e7701f146cd15ebd94e7 257 Pfam PF01255 Putative undecaprenyl diphosphate synthase 33 256 1.4E-68 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AMIS_74350 503c4e81d295e7701f146cd15ebd94e7 257 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 25 256 3.6E-61 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AMIS_74350 503c4e81d295e7701f146cd15ebd94e7 257 SUPERFAMILY SSF64005 23 252 4.19E-69 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 AMIS_74350 503c4e81d295e7701f146cd15ebd94e7 257 Gene3D G3DSA:3.40.1180.10 11 257 2.3E-80 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 AMIS_47620 24eb5cbc997e7463acfe5e4e6eb6b051 338 Gene3D G3DSA:3.40.50.720 180 298 1.1E-11 T 14-10-2018 AMIS_47620 24eb5cbc997e7463acfe5e4e6eb6b051 338 SUPERFAMILY SSF51735 185 321 1.38E-10 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_47620 24eb5cbc997e7463acfe5e4e6eb6b051 338 Gene3D G3DSA:3.90.180.10 16 179 6.5E-6 T 14-10-2018 AMIS_47620 24eb5cbc997e7463acfe5e4e6eb6b051 338 SUPERFAMILY SSF50129 26 182 2.55E-6 T 14-10-2018 IPR011032 GroES-like superfamily AMIS_37240 5f29f7352b62cbcdf6c5514fa0066118 452 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 235 251 2.8E-16 T 14-10-2018 AMIS_37240 5f29f7352b62cbcdf6c5514fa0066118 452 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 151 169 2.8E-16 T 14-10-2018 AMIS_37240 5f29f7352b62cbcdf6c5514fa0066118 452 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 104 122 2.8E-16 T 14-10-2018 AMIS_37240 5f29f7352b62cbcdf6c5514fa0066118 452 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 3 22 2.8E-16 T 14-10-2018 AMIS_37240 5f29f7352b62cbcdf6c5514fa0066118 452 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 267 289 2.8E-16 T 14-10-2018 AMIS_37240 5f29f7352b62cbcdf6c5514fa0066118 452 SUPERFAMILY SSF51905 150 321 4.1E-29 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_37240 5f29f7352b62cbcdf6c5514fa0066118 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 236 250 3.9E-14 T 14-10-2018 AMIS_37240 5f29f7352b62cbcdf6c5514fa0066118 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 151 176 3.9E-14 T 14-10-2018 AMIS_37240 5f29f7352b62cbcdf6c5514fa0066118 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 2 24 3.9E-14 T 14-10-2018 AMIS_37240 5f29f7352b62cbcdf6c5514fa0066118 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 282 289 3.9E-14 T 14-10-2018 AMIS_37240 5f29f7352b62cbcdf6c5514fa0066118 452 Gene3D G3DSA:3.50.50.60 2 345 9.9E-152 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_37240 5f29f7352b62cbcdf6c5514fa0066118 452 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 336 436 1.6E-18 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AMIS_37240 5f29f7352b62cbcdf6c5514fa0066118 452 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 312 1.8E-50 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMIS_37240 5f29f7352b62cbcdf6c5514fa0066118 452 Gene3D G3DSA:3.50.50.60 113 445 9.9E-152 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_37240 5f29f7352b62cbcdf6c5514fa0066118 452 SUPERFAMILY SSF51905 2 195 5.95E-38 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_37240 5f29f7352b62cbcdf6c5514fa0066118 452 SUPERFAMILY SSF55424 328 449 3.61E-32 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AMIS_48910 97acb123c9755addd7df775b50b510e5 325 SUPERFAMILY SSF56601 15 311 1.04E-60 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMIS_48910 97acb123c9755addd7df775b50b510e5 325 Pfam PF00144 Beta-lactamase 6 310 9.2E-53 T 14-10-2018 IPR001466 Beta-lactamase-related AMIS_48910 97acb123c9755addd7df775b50b510e5 325 Gene3D G3DSA:3.40.710.10 4 321 1.6E-68 T 14-10-2018 AMIS_33660 4bdd0cf07e8776e3b71defce4b0c84d9 340 SUPERFAMILY SSF53474 60 221 8.9E-21 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_33660 4bdd0cf07e8776e3b71defce4b0c84d9 340 Gene3D G3DSA:3.40.50.1820 35 338 6.7E-87 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_33660 4bdd0cf07e8776e3b71defce4b0c84d9 340 Pfam PF01674 Lipase (class 2) 63 226 4.8E-5 T 14-10-2018 IPR002918 Lipase EstA/Esterase EstB GO:0016787 KEGG: 00561+3.1.1.3|MetaCyc: PWY-6857 AMIS_71810 a0e07a0c502cc25c8356f375a0a22329 844 Gene3D G3DSA:3.40.50.300 321 599 1.7E-40 T 14-10-2018 AMIS_71810 a0e07a0c502cc25c8356f375a0a22329 844 Pfam PF01580 FtsK/SpoIIIE family 365 523 4.2E-12 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 AMIS_71810 a0e07a0c502cc25c8356f375a0a22329 844 SUPERFAMILY SSF52540 342 540 2.46E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_16720 74980a5cb7c69ea540a41b927a6e4ecf 259 Pfam PF13242 HAD-hyrolase-like 182 255 5.1E-22 T 14-10-2018 AMIS_16720 74980a5cb7c69ea540a41b927a6e4ecf 259 SUPERFAMILY SSF56784 9 257 1.94E-67 T 14-10-2018 IPR036412 HAD-like superfamily AMIS_16720 74980a5cb7c69ea540a41b927a6e4ecf 259 Pfam PF13344 Haloacid dehalogenase-like hydrolase 10 109 4.2E-26 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA AMIS_16720 74980a5cb7c69ea540a41b927a6e4ecf 259 PIRSF PIRSF000915 110 259 5.9E-32 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA AMIS_16720 74980a5cb7c69ea540a41b927a6e4ecf 259 PIRSF PIRSF000915 4 118 2.1E-24 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA AMIS_16720 74980a5cb7c69ea540a41b927a6e4ecf 259 Gene3D G3DSA:3.40.50.1000 10 245 1.0E-78 T 14-10-2018 IPR023214 HAD superfamily AMIS_16720 74980a5cb7c69ea540a41b927a6e4ecf 259 Gene3D G3DSA:3.40.50.1000 87 182 1.0E-78 T 14-10-2018 IPR023214 HAD superfamily AMIS_16720 74980a5cb7c69ea540a41b927a6e4ecf 259 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 11 231 3.1E-46 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA AMIS_38000 979f24770bfb19a549935bc32baf4b22 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 66 1.2E-14 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_38000 979f24770bfb19a549935bc32baf4b22 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 2.9E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_38000 979f24770bfb19a549935bc32baf4b22 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 2.9E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_38000 979f24770bfb19a549935bc32baf4b22 202 Gene3D G3DSA:1.10.357.10 4 200 8.2E-47 T 14-10-2018 AMIS_38000 979f24770bfb19a549935bc32baf4b22 202 SUPERFAMILY SSF46689 7 84 3.08E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_65020 f085680b4545550c13b90942d5b83d5e 234 SUPERFAMILY SSF48498 87 232 3.45E-19 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_65020 f085680b4545550c13b90942d5b83d5e 234 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 83 230 3.5E-11 T 14-10-2018 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 AMIS_65020 f085680b4545550c13b90942d5b83d5e 234 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 46 69 1.3E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_65020 f085680b4545550c13b90942d5b83d5e 234 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 25 38 1.3E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_65020 f085680b4545550c13b90942d5b83d5e 234 Pfam PF00440 Bacterial regulatory proteins, tetR family 29 69 4.0E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_65020 f085680b4545550c13b90942d5b83d5e 234 Gene3D G3DSA:1.10.357.10 14 234 1.1E-48 T 14-10-2018 AMIS_65020 f085680b4545550c13b90942d5b83d5e 234 PRINTS PR00400 Tetracycline repressor protein signature 213 227 4.5E-5 T 14-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 AMIS_65020 f085680b4545550c13b90942d5b83d5e 234 PRINTS PR00400 Tetracycline repressor protein signature 37 60 4.5E-5 T 14-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 AMIS_65020 f085680b4545550c13b90942d5b83d5e 234 SUPERFAMILY SSF46689 18 80 5.64E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_58700 0d475e3bb93c4f166492b1c15042223d 104 Gene3D G3DSA:3.40.630.30 9 103 2.9E-28 T 14-10-2018 AMIS_58700 0d475e3bb93c4f166492b1c15042223d 104 SUPERFAMILY SSF55729 7 97 1.27E-25 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_58700 0d475e3bb93c4f166492b1c15042223d 104 Pfam PF14542 GCN5-related N-acetyl-transferase 17 94 5.5E-26 T 14-10-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase AMIS_18400 87881e81bc5f2e6793f23074857e7e26 328 Pfam PF03773 Predicted permease 50 323 1.5E-48 T 14-10-2018 IPR005524 Predicted permease DUF318 AMIS_14870 d761655166103aa47bdcf83f64c5371c 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.2E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_14870 d761655166103aa47bdcf83f64c5371c 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.2E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_14870 d761655166103aa47bdcf83f64c5371c 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.2E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_14870 d761655166103aa47bdcf83f64c5371c 312 SUPERFAMILY SSF53850 90 295 2.06E-36 T 14-10-2018 AMIS_14870 d761655166103aa47bdcf83f64c5371c 312 Gene3D G3DSA:1.10.10.10 1 84 4.6E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_14870 d761655166103aa47bdcf83f64c5371c 312 Gene3D G3DSA:3.40.190.290 90 297 1.8E-51 T 14-10-2018 AMIS_14870 d761655166103aa47bdcf83f64c5371c 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.0E-22 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_14870 d761655166103aa47bdcf83f64c5371c 312 SUPERFAMILY SSF46785 3 110 4.84E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_14870 d761655166103aa47bdcf83f64c5371c 312 Pfam PF03466 LysR substrate binding domain 89 293 1.9E-42 T 14-10-2018 IPR005119 LysR, substrate-binding AMIS_10530 d91793611e8273586fc81e3821a14da1 107 Pfam PF12823 Domain of unknown function (DUF3817) 5 93 2.5E-29 T 14-10-2018 IPR023845 Domain of unknown function DUF3817, transmembrane AMIS_10530 d91793611e8273586fc81e3821a14da1 107 TIGRFAM TIGR03954 integ_memb_HG: integral membrane protein 8 91 6.1E-33 T 14-10-2018 IPR023845 Domain of unknown function DUF3817, transmembrane AMIS_22920 336cca748380bf351767e5aca2909ad1 400 SUPERFAMILY SSF53850 43 392 2.02E-27 T 14-10-2018 AMIS_22920 336cca748380bf351767e5aca2909ad1 400 Gene3D G3DSA:3.40.190.10 159 293 4.7E-16 T 14-10-2018 AMIS_22920 336cca748380bf351767e5aca2909ad1 400 Gene3D G3DSA:3.40.190.10 58 334 4.7E-16 T 14-10-2018 AMIS_22920 336cca748380bf351767e5aca2909ad1 400 Pfam PF13416 Bacterial extracellular solute-binding protein 60 349 2.4E-26 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein AMIS_11130 8e03d4985e9617bc38719e6c5c235976 404 Gene3D G3DSA:3.40.630.30 132 292 3.6E-38 T 14-10-2018 AMIS_11130 8e03d4985e9617bc38719e6c5c235976 404 SUPERFAMILY SSF55718 302 384 6.67E-19 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily AMIS_11130 8e03d4985e9617bc38719e6c5c235976 404 Hamap MF_01812 N-acetyltransferase Eis [eis]. 4 404 34.228 T 14-10-2018 IPR022902 N-acetyltransferase Eis AMIS_11130 8e03d4985e9617bc38719e6c5c235976 404 Gene3D G3DSA:3.40.630.30 2 131 6.5E-37 T 14-10-2018 AMIS_11130 8e03d4985e9617bc38719e6c5c235976 404 SUPERFAMILY SSF55729 5 301 2.52E-62 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_11130 8e03d4985e9617bc38719e6c5c235976 404 Pfam PF13530 Sterol carrier protein domain 180 385 9.3E-50 T 14-10-2018 IPR025559 Enhanced intracellular survival protein domain AMIS_11130 8e03d4985e9617bc38719e6c5c235976 404 Pfam PF13527 Acetyltransferase (GNAT) domain 7 128 1.3E-30 T 14-10-2018 AMIS_11130 8e03d4985e9617bc38719e6c5c235976 404 Gene3D G3DSA:3.30.1050.10 300 389 8.9E-26 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily AMIS_7500 e29f76739a4210dfa5b0bcae17815b67 594 Gene3D G3DSA:3.90.226.10 289 551 3.3E-27 T 14-10-2018 AMIS_7500 e29f76739a4210dfa5b0bcae17815b67 594 Pfam PF00378 Enoyl-CoA hydratase/isomerase 336 483 3.4E-16 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AMIS_7500 e29f76739a4210dfa5b0bcae17815b67 594 Pfam PF02911 Formyl transferase, C-terminal domain 181 259 6.6E-13 T 14-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMIS_7500 e29f76739a4210dfa5b0bcae17815b67 594 SUPERFAMILY SSF50486 181 259 1.12E-15 T 14-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 AMIS_7500 e29f76739a4210dfa5b0bcae17815b67 594 PIRSF PIRSF006787 1 576 4.4E-186 T 14-10-2018 IPR009188 [NiFe]-hydrogenase maturation factor, HypX/HoxX type AMIS_7500 e29f76739a4210dfa5b0bcae17815b67 594 Gene3D G3DSA:3.10.25.10 180 270 2.0E-11 T 14-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMIS_7500 e29f76739a4210dfa5b0bcae17815b67 594 Gene3D G3DSA:3.40.50.170 21 166 4.3E-12 T 14-10-2018 AMIS_7500 e29f76739a4210dfa5b0bcae17815b67 594 SUPERFAMILY SSF52096 294 551 7.79E-31 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMIS_7500 e29f76739a4210dfa5b0bcae17815b67 594 SUPERFAMILY SSF53328 3 162 3.66E-19 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMIS_63960 e4b14453d86f03ad223175deab666eee 197 Pfam PF00041 Fibronectin type III domain 98 176 8.1E-9 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 AMIS_63960 e4b14453d86f03ad223175deab666eee 197 SMART SM00060 89 177 2.5E-4 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 AMIS_63960 e4b14453d86f03ad223175deab666eee 197 Gene3D G3DSA:2.60.40.10 71 186 7.1E-8 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_63960 e4b14453d86f03ad223175deab666eee 197 SUPERFAMILY SSF49265 96 172 1.24E-9 T 14-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 AMIS_79830 bd258d0d8c52a8c45bc3cfd26cf0f886 173 SUPERFAMILY SSF46689 23 66 4.49E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_79830 bd258d0d8c52a8c45bc3cfd26cf0f886 173 SUPERFAMILY SSF48498 70 170 6.67E-9 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_79830 bd258d0d8c52a8c45bc3cfd26cf0f886 173 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 50 2.5E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_79830 bd258d0d8c52a8c45bc3cfd26cf0f886 173 Gene3D G3DSA:1.10.357.10 18 173 1.1E-45 T 14-10-2018 AMIS_80370 74998ca973b68c878924c73717a0fe31 395 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 117 297 8.4E-37 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain AMIS_80370 74998ca973b68c878924c73717a0fe31 395 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 117 297 3.8E-29 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain AMIS_80370 74998ca973b68c878924c73717a0fe31 395 Gene3D G3DSA:1.10.260.150 81 387 9.6E-63 T 14-10-2018 AMIS_62880 fda1329fabd80d06fa776ef35cf6659c 378 Pfam PF13439 Glycosyltransferase Family 4 14 172 1.7E-25 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AMIS_62880 fda1329fabd80d06fa776ef35cf6659c 378 Pfam PF13692 Glycosyl transferases group 1 191 330 1.3E-25 T 14-10-2018 AMIS_62880 fda1329fabd80d06fa776ef35cf6659c 378 SUPERFAMILY SSF53756 3 365 5.39E-71 T 14-10-2018 AMIS_62880 fda1329fabd80d06fa776ef35cf6659c 378 Gene3D G3DSA:3.40.50.2000 11 361 2.1E-110 T 14-10-2018 AMIS_62880 fda1329fabd80d06fa776ef35cf6659c 378 Gene3D G3DSA:3.40.50.2000 171 348 2.1E-110 T 14-10-2018 AMIS_72680 776fefe9e8610fab8482ff4da5ac8a05 116 PIRSF PIRSF000077 3 109 1.9E-30 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AMIS_72680 776fefe9e8610fab8482ff4da5ac8a05 116 Pfam PF00085 Thioredoxin 7 106 1.7E-26 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 AMIS_72680 776fefe9e8610fab8482ff4da5ac8a05 116 SUPERFAMILY SSF52833 5 110 2.45E-32 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMIS_72680 776fefe9e8610fab8482ff4da5ac8a05 116 PRINTS PR00421 Thioredoxin family signature 25 33 3.2E-5 T 14-10-2018 AMIS_72680 776fefe9e8610fab8482ff4da5ac8a05 116 PRINTS PR00421 Thioredoxin family signature 73 84 3.2E-5 T 14-10-2018 AMIS_72680 776fefe9e8610fab8482ff4da5ac8a05 116 PRINTS PR00421 Thioredoxin family signature 33 42 3.2E-5 T 14-10-2018 AMIS_72680 776fefe9e8610fab8482ff4da5ac8a05 116 Gene3D G3DSA:3.40.30.10 2 113 9.0E-29 T 14-10-2018 AMIS_72680 776fefe9e8610fab8482ff4da5ac8a05 116 ProSitePatterns PS00194 Thioredoxin family active site. 26 44 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AMIS_72680 776fefe9e8610fab8482ff4da5ac8a05 116 TIGRFAM TIGR01068 thioredoxin: thioredoxin 10 107 5.7E-29 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AMIS_81090 3d07eec449ca3f62c9d28125501979e5 219 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 24 183 4.2E-26 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_81090 3d07eec449ca3f62c9d28125501979e5 219 Gene3D G3DSA:1.10.10.10 125 184 2.6E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_81090 3d07eec449ca3f62c9d28125501979e5 219 Gene3D G3DSA:1.10.1740.10 7 113 7.0E-30 T 14-10-2018 AMIS_81090 3d07eec449ca3f62c9d28125501979e5 219 Pfam PF08281 Sigma-70, region 4 130 180 7.4E-15 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_81090 3d07eec449ca3f62c9d28125501979e5 219 SUPERFAMILY SSF88659 123 182 6.11E-14 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_81090 3d07eec449ca3f62c9d28125501979e5 219 Pfam PF04542 Sigma-70 region 2 30 95 9.4E-17 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_81090 3d07eec449ca3f62c9d28125501979e5 219 SUPERFAMILY SSF88946 9 105 1.57E-28 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_7490 10c35b40880751affe3dd37b02fcf9ae 568 Pfam PF13506 Glycosyl transferase family 21 200 368 5.1E-19 T 14-10-2018 IPR025993 Ceramide glucosyltransferase GO:0016757 KEGG: 00600+2.4.1.80|MetaCyc: PWY-5129|MetaCyc: PWY-7836|MetaCyc: PWY-7838|MetaCyc: PWY-7839|MetaCyc: PWY-7841|Reactome: R-HSA-1660662 AMIS_7490 10c35b40880751affe3dd37b02fcf9ae 568 Gene3D G3DSA:3.90.550.10 125 353 1.4E-48 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_7490 10c35b40880751affe3dd37b02fcf9ae 568 SUPERFAMILY SSF53448 139 397 9.11E-30 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_39770 644722ee9d54a3704a42b0760ab07db1 286 SUPERFAMILY SSF46689 4 50 9.86E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_39770 644722ee9d54a3704a42b0760ab07db1 286 Gene3D G3DSA:1.10.10.60 3 52 2.9E-7 T 14-10-2018 AMIS_39770 644722ee9d54a3704a42b0760ab07db1 286 Pfam PF12833 Helix-turn-helix domain 22 100 5.3E-16 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMIS_39770 644722ee9d54a3704a42b0760ab07db1 286 Gene3D G3DSA:3.20.80.10 123 284 5.0E-26 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily AMIS_39770 644722ee9d54a3704a42b0760ab07db1 286 SUPERFAMILY SSF55136 123 285 1.02E-21 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily AMIS_39770 644722ee9d54a3704a42b0760ab07db1 286 Pfam PF06445 GyrI-like small molecule binding domain 123 283 4.5E-23 T 14-10-2018 IPR029442 GyrI-like small molecule binding domain AMIS_39770 644722ee9d54a3704a42b0760ab07db1 286 Gene3D G3DSA:1.10.10.60 53 107 1.7E-8 T 14-10-2018 AMIS_39770 644722ee9d54a3704a42b0760ab07db1 286 SMART SM00871 123 284 8.7E-21 T 14-10-2018 IPR010499 Bacterial transcription activator, effector binding AMIS_39770 644722ee9d54a3704a42b0760ab07db1 286 SMART SM00342 16 99 6.2E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMIS_39770 644722ee9d54a3704a42b0760ab07db1 286 SUPERFAMILY SSF46689 52 104 1.3E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_34530 17ccb27964e3e3ca7e557adb9b1c039f 238 SMART SM00849 14 217 2.2E-24 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMIS_34530 17ccb27964e3e3ca7e557adb9b1c039f 238 Pfam PF00753 Metallo-beta-lactamase superfamily 11 217 2.9E-28 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMIS_34530 17ccb27964e3e3ca7e557adb9b1c039f 238 Gene3D G3DSA:3.60.15.10 1 235 1.3E-46 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMIS_34530 17ccb27964e3e3ca7e557adb9b1c039f 238 SUPERFAMILY SSF56281 2 230 1.17E-43 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMIS_6510 b6e723988c9e68d1fcfaf1fb5629dd2b 992 Gene3D G3DSA:3.30.565.10 496 637 5.2E-11 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_6510 b6e723988c9e68d1fcfaf1fb5629dd2b 992 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 534 637 3.1E-6 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_6510 b6e723988c9e68d1fcfaf1fb5629dd2b 992 SMART SM00387 529 639 5.9E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_6510 b6e723988c9e68d1fcfaf1fb5629dd2b 992 SUPERFAMILY SSF55874 519 637 9.43E-16 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_6510 b6e723988c9e68d1fcfaf1fb5629dd2b 992 Pfam PF08376 Nitrate and nitrite sensing 75 301 6.0E-20 T 14-10-2018 IPR013587 Nitrate/nitrite sensing protein AMIS_60070 71e6f0521972e7a17692bd7d74882c1a 323 Gene3D G3DSA:3.90.180.10 15 319 1.0E-92 T 14-10-2018 AMIS_60070 71e6f0521972e7a17692bd7d74882c1a 323 Gene3D G3DSA:3.40.50.720 129 270 1.0E-92 T 14-10-2018 AMIS_60070 71e6f0521972e7a17692bd7d74882c1a 323 SMART SM00829 10 319 2.0E-12 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMIS_60070 71e6f0521972e7a17692bd7d74882c1a 323 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 24 98 3.8E-8 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMIS_60070 71e6f0521972e7a17692bd7d74882c1a 323 SUPERFAMILY SSF50129 1 148 2.43E-35 T 14-10-2018 IPR011032 GroES-like superfamily AMIS_60070 71e6f0521972e7a17692bd7d74882c1a 323 SUPERFAMILY SSF51735 118 296 1.14E-31 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_60070 71e6f0521972e7a17692bd7d74882c1a 323 Pfam PF13602 Zinc-binding dehydrogenase 185 319 2.9E-29 T 14-10-2018 AMIS_32520 507662b62c1f8cfedf1532c14fe90a15 357 Gene3D G3DSA:1.25.10.10 234 357 7.2E-7 T 14-10-2018 IPR011989 Armadillo-like helical AMIS_32520 507662b62c1f8cfedf1532c14fe90a15 357 SUPERFAMILY SSF46955 3 101 2.67E-24 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily AMIS_32520 507662b62c1f8cfedf1532c14fe90a15 357 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_32520 507662b62c1f8cfedf1532c14fe90a15 357 Gene3D G3DSA:1.25.10.110 151 233 4.0E-6 T 14-10-2018 AMIS_32520 507662b62c1f8cfedf1532c14fe90a15 357 Gene3D G3DSA:1.10.1660.10 1 107 9.8E-26 T 14-10-2018 AMIS_32520 507662b62c1f8cfedf1532c14fe90a15 357 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 2.5E-7 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_32520 507662b62c1f8cfedf1532c14fe90a15 357 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 2.5E-7 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_32520 507662b62c1f8cfedf1532c14fe90a15 357 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 2.5E-7 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_32520 507662b62c1f8cfedf1532c14fe90a15 357 Pfam PF13411 MerR HTH family regulatory protein 3 68 2.6E-15 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_32520 507662b62c1f8cfedf1532c14fe90a15 357 SMART SM00422 1 70 2.0E-20 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_32520 507662b62c1f8cfedf1532c14fe90a15 357 Pfam PF13646 HEAT repeats 152 229 4.6E-7 T 14-10-2018 AMIS_32520 507662b62c1f8cfedf1532c14fe90a15 357 SMART SM00567 E-Z type HEAT repeats 195 224 0.3 T 14-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 AMIS_32520 507662b62c1f8cfedf1532c14fe90a15 357 SMART SM00567 E-Z type HEAT repeats 244 273 29.0 T 14-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 AMIS_32520 507662b62c1f8cfedf1532c14fe90a15 357 SMART SM00567 E-Z type HEAT repeats 311 340 230.0 T 14-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 AMIS_32520 507662b62c1f8cfedf1532c14fe90a15 357 SUPERFAMILY SSF48371 118 352 1.24E-12 T 14-10-2018 IPR016024 Armadillo-type fold AMIS_63810 a786dcbd2fdc73cc3664a4640a79ea75 164 Gene3D G3DSA:1.10.3330.10 1 162 1.9E-52 T 14-10-2018 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 AMIS_63810 a786dcbd2fdc73cc3664a4640a79ea75 164 TIGRFAM TIGR03180 UraD_2: OHCU decarboxylase 4 160 6.4E-51 T 14-10-2018 IPR017595 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 2 AMIS_63810 a786dcbd2fdc73cc3664a4640a79ea75 164 Pfam PF09349 OHCU decarboxylase 6 158 1.7E-39 T 14-10-2018 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 AMIS_63810 a786dcbd2fdc73cc3664a4640a79ea75 164 SUPERFAMILY SSF158694 2 161 8.37E-42 T 14-10-2018 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 AMIS_47390 c3413c860054f4bf37e87a570b6b2e59 128 Pfam PF13466 STAS domain 36 114 4.3E-14 T 14-10-2018 IPR002645 STAS domain AMIS_47390 c3413c860054f4bf37e87a570b6b2e59 128 SUPERFAMILY SSF52091 29 120 2.55E-19 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_47390 c3413c860054f4bf37e87a570b6b2e59 128 Gene3D G3DSA:3.30.750.24 21 124 6.7E-23 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_47390 c3413c860054f4bf37e87a570b6b2e59 128 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 29 122 1.2E-17 T 14-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 AMIS_52770 72eac550b2733925c856ca68a16a4058 373 SUPERFAMILY SSF53850 59 339 9.45E-41 T 14-10-2018 AMIS_52770 72eac550b2733925c856ca68a16a4058 373 Pfam PF13343 Bacterial extracellular solute-binding protein 128 324 2.2E-23 T 14-10-2018 AMIS_52770 72eac550b2733925c856ca68a16a4058 373 Gene3D G3DSA:3.40.190.10 206 353 7.0E-11 T 14-10-2018 AMIS_52770 72eac550b2733925c856ca68a16a4058 373 Gene3D G3DSA:3.40.190.10 70 200 8.1E-17 T 14-10-2018 AMIS_62670 a3d8a76a1ad72e0a9078c733d93a70e8 271 SUPERFAMILY SSF52317 23 219 8.01E-21 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_62670 a3d8a76a1ad72e0a9078c733d93a70e8 271 TIGRFAM TIGR02069 cyanophycinase: cyanophycinase 14 250 9.6E-62 T 14-10-2018 IPR011811 Peptidase S51, cyanophycinase GO:0016787|GO:0044260 MetaCyc: PWY-7052 AMIS_62670 a3d8a76a1ad72e0a9078c733d93a70e8 271 PIRSF PIRSF032067 7 268 1.1E-53 T 14-10-2018 IPR011811 Peptidase S51, cyanophycinase GO:0016787|GO:0044260 MetaCyc: PWY-7052 AMIS_62670 a3d8a76a1ad72e0a9078c733d93a70e8 271 Pfam PF03575 Peptidase family S51 24 210 6.0E-21 T 14-10-2018 IPR005320 Peptidase S51 GO:0006508|GO:0008236 AMIS_62670 a3d8a76a1ad72e0a9078c733d93a70e8 271 Gene3D G3DSA:3.40.50.880 8 259 2.7E-68 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_3530 c6953322954b864fc2c7f34d13b6aea5 180 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 11 177 5.1E-48 T 14-10-2018 IPR006286 Deglycase PfpI AMIS_3530 c6953322954b864fc2c7f34d13b6aea5 180 Gene3D G3DSA:3.40.50.880 2 180 6.1E-54 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_3530 c6953322954b864fc2c7f34d13b6aea5 180 SUPERFAMILY SSF52317 8 178 1.58E-47 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_3530 c6953322954b864fc2c7f34d13b6aea5 180 Pfam PF01965 DJ-1/PfpI family 9 176 1.5E-52 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 AMIS_23460 eb99ab604b18649a1fdac677d7c110d7 114 Gene3D G3DSA:2.30.110.10 12 114 5.0E-6 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AMIS_23460 eb99ab604b18649a1fdac677d7c110d7 114 Pfam PF10012 Uncharacterized protein conserved in bacteria (DUF2255) 18 111 1.7E-28 T 14-10-2018 IPR016888 Uncharacterised conserved protein UCP028498 AMIS_5650 1f04a521b6eb4d7c7f0be5064726f883 186 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 19 158 5.4E-33 T 14-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_5650 1f04a521b6eb4d7c7f0be5064726f883 186 Gene3D G3DSA:1.20.120.1200 5 162 2.5E-37 T 14-10-2018 AMIS_6920 c03470371c0d864cdd439e1401213054 372 SUPERFAMILY SSF51412 11 369 1.1E-61 T 14-10-2018 AMIS_6920 c03470371c0d864cdd439e1401213054 372 TIGRFAM TIGR01304 IMP_DH_rel_2: IMP dehydrogenase family protein 5 369 3.6E-170 T 14-10-2018 IPR005992 IMP dehydrogenase-related 2 GO:0016491|GO:0055114 AMIS_6920 c03470371c0d864cdd439e1401213054 372 SMART SM01240 15 370 9.9E-16 T 14-10-2018 AMIS_6920 c03470371c0d864cdd439e1401213054 372 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 17 298 4.0E-30 T 14-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 AMIS_6920 c03470371c0d864cdd439e1401213054 372 Gene3D G3DSA:3.20.20.70 16 371 1.5E-86 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_72380 bd531dd528f76343d8a406799ea7a0e0 118 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 11 101 1.5E-16 T 14-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 AMIS_72380 bd531dd528f76343d8a406799ea7a0e0 118 Gene3D G3DSA:3.30.750.24 4 107 5.0E-20 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_72380 bd531dd528f76343d8a406799ea7a0e0 118 SUPERFAMILY SSF52091 9 103 2.94E-16 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_72380 bd531dd528f76343d8a406799ea7a0e0 118 Pfam PF13466 STAS domain 20 97 6.9E-11 T 14-10-2018 IPR002645 STAS domain AMIS_24980 1dbb91626731162ccda7d9760670b22f 426 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 316 322 - T 14-10-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 Reactome: R-HSA-9033241 AMIS_24980 1dbb91626731162ccda7d9760670b22f 426 PIRSF PIRSF000138 11 423 5.3E-119 T 14-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 AMIS_24980 1dbb91626731162ccda7d9760670b22f 426 Pfam PF01070 FMN-dependent dehydrogenase 35 418 1.1E-120 T 14-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 AMIS_24980 1dbb91626731162ccda7d9760670b22f 426 SUPERFAMILY SSF51395 28 418 3.19E-88 T 14-10-2018 AMIS_44250 22513e43f657512852a0035ea1506d70 135 Pfam PF14024 Protein of unknown function (DUF4240) 1 128 1.0E-22 T 14-10-2018 IPR025334 Domain of unknown function (DUF4240 AMIS_69250 a9d3db563705ad08d4cd9e20cda4c1b7 164 SUPERFAMILY SSF142433 8 157 8.76E-47 T 14-10-2018 IPR036653 CinA-like, C-terminal AMIS_69250 a9d3db563705ad08d4cd9e20cda4c1b7 164 Pfam PF02464 Competence-damaged protein 8 156 1.4E-50 T 14-10-2018 IPR008136 CinA, C-terminal AMIS_69250 a9d3db563705ad08d4cd9e20cda4c1b7 164 Gene3D G3DSA:3.90.950.20 1 160 1.2E-54 T 14-10-2018 IPR036653 CinA-like, C-terminal AMIS_69250 a9d3db563705ad08d4cd9e20cda4c1b7 164 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 14 154 2.6E-36 T 14-10-2018 IPR008136 CinA, C-terminal AMIS_57410 147fb5af9fe85b1da878631922618463 255 Gene3D G3DSA:3.50.30.50 1 255 2.2E-47 T 14-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 AMIS_57410 147fb5af9fe85b1da878631922618463 255 SUPERFAMILY SSF102198 1 254 2.88E-44 T 14-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 AMIS_57410 147fb5af9fe85b1da878631922618463 255 Pfam PF04199 Putative cyclase 5 190 1.7E-26 T 14-10-2018 IPR007325 Kynurenine formamidase/cyclase-like GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 AMIS_71470 3720cfbe919f93a95d371c07086321c6 127 Pfam PF13396 Phospholipase_D-nuclease N-terminal 14 57 1.1E-9 T 14-10-2018 IPR027379 Cardiolipin synthase N-terminal AMIS_13440 8f31666d4152181b3adfe29978b4526f 341 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 2 115 3.1E-30 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AMIS_13440 8f31666d4152181b3adfe29978b4526f 341 Gene3D G3DSA:3.30.360.10 125 324 1.2E-134 T 14-10-2018 AMIS_13440 8f31666d4152181b3adfe29978b4526f 341 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 240 254 - T 14-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AMIS_13440 8f31666d4152181b3adfe29978b4526f 341 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 337 33.544 T 14-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AMIS_13440 8f31666d4152181b3adfe29978b4526f 341 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 136 323 1.3E-48 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AMIS_13440 8f31666d4152181b3adfe29978b4526f 341 Gene3D G3DSA:3.40.50.720 3 335 1.2E-134 T 14-10-2018 AMIS_13440 8f31666d4152181b3adfe29978b4526f 341 SMART SM00859 2 117 8.0E-40 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AMIS_13440 8f31666d4152181b3adfe29978b4526f 341 PIRSF PIRSF000148 1 341 1.3E-110 T 14-10-2018 AMIS_13440 8f31666d4152181b3adfe29978b4526f 341 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 2 337 6.3E-126 T 14-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AMIS_13440 8f31666d4152181b3adfe29978b4526f 341 SUPERFAMILY SSF55347 126 324 2.67E-60 T 14-10-2018 AMIS_13440 8f31666d4152181b3adfe29978b4526f 341 SUPERFAMILY SSF51735 1 153 5.17E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_75190 2d39597ef908e5596215ab620e0b1bc8 234 SUPERFAMILY SSF47413 2 40 4.29E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_75190 2d39597ef908e5596215ab620e0b1bc8 234 SMART SM00530 1 58 2.3E-4 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMIS_75190 2d39597ef908e5596215ab620e0b1bc8 234 Pfam PF01381 Helix-turn-helix 2 36 7.9E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMIS_75190 2d39597ef908e5596215ab620e0b1bc8 234 Gene3D G3DSA:1.10.260.40 2 52 7.4E-10 T 14-10-2018 AMIS_41110 4c26eec0aabf30e893192ce03dc6fc8d 312 Gene3D G3DSA:3.40.190.290 92 292 1.7E-32 T 14-10-2018 AMIS_41110 4c26eec0aabf30e893192ce03dc6fc8d 312 SUPERFAMILY SSF53850 89 290 1.72E-30 T 14-10-2018 AMIS_41110 4c26eec0aabf30e893192ce03dc6fc8d 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.4E-13 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_41110 4c26eec0aabf30e893192ce03dc6fc8d 312 Gene3D G3DSA:1.10.10.10 1 90 5.8E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_41110 4c26eec0aabf30e893192ce03dc6fc8d 312 Pfam PF03466 LysR substrate binding domain 88 288 7.5E-33 T 14-10-2018 IPR005119 LysR, substrate-binding AMIS_41110 4c26eec0aabf30e893192ce03dc6fc8d 312 SUPERFAMILY SSF46785 1 111 2.73E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_57260 23618dc3bee5ce6bf736d73fd39f64ea 320 Gene3D G3DSA:3.40.50.1820 11 315 7.5E-34 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_57260 23618dc3bee5ce6bf736d73fd39f64ea 320 SUPERFAMILY SSF53474 8 271 3.85E-25 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_57260 23618dc3bee5ce6bf736d73fd39f64ea 320 Pfam PF01738 Dienelactone hydrolase family 46 221 2.1E-7 T 14-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 AMIS_34160 3f1a388891b162065be1c339d1911dd6 692 Gene3D G3DSA:1.20.1050.60 307 395 2.6E-117 T 14-10-2018 AMIS_34160 3f1a388891b162065be1c339d1911dd6 692 Gene3D G3DSA:2.70.98.10 33 306 2.6E-117 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AMIS_34160 3f1a388891b162065be1c339d1911dd6 692 Pfam PF07971 Glycosyl hydrolase family 92 210 672 6.7E-91 T 14-10-2018 IPR012939 Glycosyl hydrolase family 92 AMIS_34160 3f1a388891b162065be1c339d1911dd6 692 SUPERFAMILY SSF48208 236 653 5.65E-22 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AMIS_34160 3f1a388891b162065be1c339d1911dd6 692 Gene3D G3DSA:3.30.2080.10 262 676 2.6E-117 T 14-10-2018 AMIS_34160 3f1a388891b162065be1c339d1911dd6 692 Gene3D G3DSA:1.20.1610.10 396 538 2.6E-117 T 14-10-2018 AMIS_62950 cc499ff74562121907741f4f6c0b36ce 670 Gene3D G3DSA:3.30.70.270 508 669 3.6E-55 T 14-10-2018 AMIS_62950 cc499ff74562121907741f4f6c0b36ce 670 SMART SM00267 498 669 5.6E-61 T 14-10-2018 IPR000160 GGDEF domain AMIS_62950 cc499ff74562121907741f4f6c0b36ce 670 Pfam PF00990 Diguanylate cyclase, GGDEF domain 509 663 5.6E-45 T 14-10-2018 IPR000160 GGDEF domain AMIS_62950 cc499ff74562121907741f4f6c0b36ce 670 SUPERFAMILY SSF55781 377 509 1.2E-8 T 14-10-2018 AMIS_62950 cc499ff74562121907741f4f6c0b36ce 670 Gene3D G3DSA:3.30.450.40 345 507 4.6E-8 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_62950 cc499ff74562121907741f4f6c0b36ce 670 SUPERFAMILY SSF55073 514 668 5.41E-48 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_62950 cc499ff74562121907741f4f6c0b36ce 670 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 505 667 4.4E-39 T 14-10-2018 IPR000160 GGDEF domain AMIS_33640 6bee111a2e2b58d3dfe5fc0cca927f86 262 Pfam PF00005 ABC transporter 25 170 1.4E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_33640 6bee111a2e2b58d3dfe5fc0cca927f86 262 SUPERFAMILY SSF52540 4 223 2.6E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_33640 6bee111a2e2b58d3dfe5fc0cca927f86 262 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_33640 6bee111a2e2b58d3dfe5fc0cca927f86 262 SMART SM00382 33 219 2.9E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_33640 6bee111a2e2b58d3dfe5fc0cca927f86 262 Gene3D G3DSA:3.40.50.300 2 251 6.2E-72 T 14-10-2018 AMIS_33020 47c3ab5cb14fd5fc134770600249cc87 253 PIRSF PIRSF006648 1 253 7.3E-68 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AMIS_33020 47c3ab5cb14fd5fc134770600249cc87 253 Pfam PF01061 ABC-2 type transporter 11 217 1.5E-21 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 AMIS_29880 d9247759f43ace065c2adae8687f69d7 746 Gene3D G3DSA:2.70.98.50 17 268 3.3E-199 T 14-10-2018 AMIS_29880 d9247759f43ace065c2adae8687f69d7 746 PIRSF PIRSF007663 1 744 1.1E-219 T 14-10-2018 IPR016518 Alpha-L-fucosidase GO:0004560 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807 AMIS_29880 d9247759f43ace065c2adae8687f69d7 746 Gene3D G3DSA:1.50.10.10 13 714 3.3E-199 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 AMIS_29880 d9247759f43ace065c2adae8687f69d7 746 SUPERFAMILY SSF48208 249 725 5.78E-68 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AMIS_29880 d9247759f43ace065c2adae8687f69d7 746 Gene3D G3DSA:2.60.40.1180 269 730 3.3E-199 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta AMIS_29880 d9247759f43ace065c2adae8687f69d7 746 Pfam PF14498 Glycosyl hydrolase family 65, N-terminal domain 4 240 2.6E-59 T 14-10-2018 IPR027414 Glycosyl hydrolase family 95, N-terminal domain KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807 AMIS_57990 218afadc550e6e18c329159d7264ea90 497 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 359 379 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AMIS_57990 218afadc550e6e18c329159d7264ea90 497 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 5 493 2.0E-202 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 AMIS_57990 218afadc550e6e18c329159d7264ea90 497 SUPERFAMILY SSF53067 5 251 6.48E-85 T 14-10-2018 AMIS_57990 218afadc550e6e18c329159d7264ea90 497 PIRSF PIRSF000538 3 497 1.6E-155 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AMIS_57990 218afadc550e6e18c329159d7264ea90 497 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 257 447 5.3E-59 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AMIS_57990 218afadc550e6e18c329159d7264ea90 497 Gene3D G3DSA:3.30.420.40 250 496 6.0E-86 T 14-10-2018 AMIS_57990 218afadc550e6e18c329159d7264ea90 497 Hamap MF_00186 Glycerol kinase [glpK]. 3 494 51.778 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 AMIS_57990 218afadc550e6e18c329159d7264ea90 497 Gene3D G3DSA:3.30.420.40 4 249 5.3E-98 T 14-10-2018 AMIS_57990 218afadc550e6e18c329159d7264ea90 497 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 248 1.3E-69 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AMIS_57990 218afadc550e6e18c329159d7264ea90 497 SUPERFAMILY SSF53067 251 494 9.62E-78 T 14-10-2018 AMIS_58520 7191f1db9dc859fc03cc679160f5ea94 412 Gene3D G3DSA:3.50.50.60 1 81 5.8E-11 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_58520 7191f1db9dc859fc03cc679160f5ea94 412 SUPERFAMILY SSF51905 83 392 4.86E-52 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_58520 7191f1db9dc859fc03cc679160f5ea94 412 PRINTS PR00419 Adrenodoxin reductase family signature 84 106 1.0E-5 T 14-10-2018 AMIS_58520 7191f1db9dc859fc03cc679160f5ea94 412 PRINTS PR00419 Adrenodoxin reductase family signature 107 120 1.0E-5 T 14-10-2018 AMIS_58520 7191f1db9dc859fc03cc679160f5ea94 412 Gene3D G3DSA:3.50.50.60 82 412 2.6E-58 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_58520 7191f1db9dc859fc03cc679160f5ea94 412 Pfam PF01593 Flavin containing amine oxidoreductase 247 411 5.1E-26 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 AMIS_58520 7191f1db9dc859fc03cc679160f5ea94 412 Pfam PF01593 Flavin containing amine oxidoreductase 92 163 5.4E-16 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 AMIS_58520 7191f1db9dc859fc03cc679160f5ea94 412 Pfam PF01593 Flavin containing amine oxidoreductase 10 73 7.1E-8 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 AMIS_46260 9ae08e98b798b115261887d6be7f867c 285 Pfam PF00561 alpha/beta hydrolase fold 25 265 3.2E-27 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_46260 9ae08e98b798b115261887d6be7f867c 285 SUPERFAMILY SSF53474 4 282 2.1E-64 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_46260 9ae08e98b798b115261887d6be7f867c 285 Gene3D G3DSA:3.40.50.1820 1 282 7.4E-57 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_46260 9ae08e98b798b115261887d6be7f867c 285 PRINTS PR00111 Alpha/beta hydrolase fold signature 97 110 5.7E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_46260 9ae08e98b798b115261887d6be7f867c 285 PRINTS PR00111 Alpha/beta hydrolase fold signature 50 65 5.7E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_46260 9ae08e98b798b115261887d6be7f867c 285 PRINTS PR00111 Alpha/beta hydrolase fold signature 227 241 5.7E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_3390 0fc207cbdb1a786d6aef070d80ba60dd 290 Pfam PF04468 PSP1 C-terminal conserved region 60 149 2.8E-17 T 14-10-2018 IPR007557 PSP1, C-terminal AMIS_34780 04112b7493f39fbf20558b9e59be4582 135 Gene3D G3DSA:3.40.50.1010 2 123 5.9E-9 T 14-10-2018 AMIS_61990 ee64eb0c8d7e75162790643f3c4cb824 333 SUPERFAMILY SSF52172 22 147 2.85E-42 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_61990 ee64eb0c8d7e75162790643f3c4cb824 333 Gene3D G3DSA:3.40.50.2300 11 148 4.0E-39 T 14-10-2018 AMIS_61990 ee64eb0c8d7e75162790643f3c4cb824 333 SUPERFAMILY SSF55073 150 323 8.63E-20 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_61990 ee64eb0c8d7e75162790643f3c4cb824 333 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 158 294 7.3E-11 T 14-10-2018 IPR000160 GGDEF domain AMIS_61990 ee64eb0c8d7e75162790643f3c4cb824 333 SMART SM00267 140 325 1.5E-5 T 14-10-2018 IPR000160 GGDEF domain AMIS_61990 ee64eb0c8d7e75162790643f3c4cb824 333 Pfam PF00072 Response regulator receiver domain 23 134 4.8E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_61990 ee64eb0c8d7e75162790643f3c4cb824 333 SMART SM00448 21 134 1.2E-40 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_61990 ee64eb0c8d7e75162790643f3c4cb824 333 Gene3D G3DSA:3.30.70.270 149 329 2.1E-22 T 14-10-2018 AMIS_61990 ee64eb0c8d7e75162790643f3c4cb824 333 Pfam PF00990 Diguanylate cyclase, GGDEF domain 149 233 2.5E-11 T 14-10-2018 IPR000160 GGDEF domain AMIS_48090 d57c09dc920ca8a0136a44a61bd03e1a 358 Gene3D G3DSA:3.80.30.30 137 358 7.1E-40 T 14-10-2018 AMIS_48090 d57c09dc920ca8a0136a44a61bd03e1a 358 TIGRFAM TIGR03886 lyase_spl_fam: spore photoproduct lyase family protein 13 358 1.3E-189 T 14-10-2018 IPR023805 Uncharacterised protein family, spore photo-product lyase-related AMIS_48090 d57c09dc920ca8a0136a44a61bd03e1a 358 Gene3D G3DSA:3.40.50.12110 12 122 1.6E-29 T 14-10-2018 AMIS_73500 41139e7e05694e215b2f932d9ef54df1 860 SUPERFAMILY SSF52540 366 706 4.14E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_8130 51cdc2346974243e331fbb2a7a2e29bb 165 SMART SM01001 3 152 2.1E-96 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AMIS_8130 51cdc2346974243e331fbb2a7a2e29bb 165 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 5 159 1.7E-65 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AMIS_8130 51cdc2346974243e331fbb2a7a2e29bb 165 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 5 156 32.259 T 14-10-2018 IPR033747 Class I PurE AMIS_8130 51cdc2346974243e331fbb2a7a2e29bb 165 Pfam PF00731 AIR carboxylase 5 148 2.4E-65 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AMIS_8130 51cdc2346974243e331fbb2a7a2e29bb 165 PIRSF PIRSF001338 1 163 1.4E-65 T 14-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 AMIS_8130 51cdc2346974243e331fbb2a7a2e29bb 165 SUPERFAMILY SSF52255 3 161 3.53E-65 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 AMIS_8130 51cdc2346974243e331fbb2a7a2e29bb 165 Gene3D G3DSA:3.40.50.7700 1 164 2.5E-74 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 AMIS_65990 e40abfe80db497bd2e285e6e177dd4bc 439 Pfam PF07690 Major Facilitator Superfamily 19 251 2.2E-19 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_65990 e40abfe80db497bd2e285e6e177dd4bc 439 SUPERFAMILY SSF103473 7 414 2.49E-50 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_65990 e40abfe80db497bd2e285e6e177dd4bc 439 Gene3D G3DSA:1.20.1250.20 5 195 1.7E-26 T 14-10-2018 AMIS_65990 e40abfe80db497bd2e285e6e177dd4bc 439 Gene3D G3DSA:1.20.1250.20 208 418 6.1E-18 T 14-10-2018 AMIS_11710 fa32c98010d250340f061df6405d2ca5 245 Pfam PF00378 Enoyl-CoA hydratase/isomerase 4 244 1.1E-42 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AMIS_11710 fa32c98010d250340f061df6405d2ca5 245 Gene3D G3DSA:1.10.12.10 191 245 8.3E-16 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal AMIS_11710 fa32c98010d250340f061df6405d2ca5 245 Gene3D G3DSA:3.90.226.10 1 187 2.0E-51 T 14-10-2018 AMIS_11710 fa32c98010d250340f061df6405d2ca5 245 SUPERFAMILY SSF52096 2 244 4.24E-66 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMIS_79560 01e4cd202c00babe646d7b6ec8b9f3b5 117 Gene3D G3DSA:1.10.10.10 5 102 2.2E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_79560 01e4cd202c00babe646d7b6ec8b9f3b5 117 SUPERFAMILY SSF46785 10 97 4.03E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_79560 01e4cd202c00babe646d7b6ec8b9f3b5 117 Pfam PF03551 Transcriptional regulator PadR-like family 12 85 1.1E-16 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal AMIS_28260 13ce2f8ecf435b95afa848f79c141f74 210 SUPERFAMILY SSF55136 117 193 4.19E-8 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily AMIS_28260 13ce2f8ecf435b95afa848f79c141f74 210 Gene3D G3DSA:3.20.80.10 1 203 2.1E-74 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily AMIS_28260 13ce2f8ecf435b95afa848f79c141f74 210 Pfam PF06445 GyrI-like small molecule binding domain 20 199 3.8E-19 T 14-10-2018 IPR029442 GyrI-like small molecule binding domain AMIS_28260 13ce2f8ecf435b95afa848f79c141f74 210 PIRSF PIRSF031644 1 205 6.5E-57 T 14-10-2018 IPR008319 Uncharacterised conserved protein UCP031644 AMIS_24360 90ba50de03347cc52cf455a93df6fd96 205 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 181 7.0E-70 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 AMIS_24360 90ba50de03347cc52cf455a93df6fd96 205 SUPERFAMILY SSF51182 2 195 2.49E-70 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily AMIS_24360 90ba50de03347cc52cf455a93df6fd96 205 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 7 176 2.4E-60 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 AMIS_24360 90ba50de03347cc52cf455a93df6fd96 205 Gene3D G3DSA:2.60.120.10 1 202 1.1E-71 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMIS_4970 b87bbe8931eeeb6e5cb100305865b4e8 304 Pfam PF03466 LysR substrate binding domain 87 286 5.1E-42 T 14-10-2018 IPR005119 LysR, substrate-binding AMIS_4970 b87bbe8931eeeb6e5cb100305865b4e8 304 SUPERFAMILY SSF53850 89 286 2.58E-40 T 14-10-2018 AMIS_4970 b87bbe8931eeeb6e5cb100305865b4e8 304 Gene3D G3DSA:1.10.10.10 1 83 4.6E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_4970 b87bbe8931eeeb6e5cb100305865b4e8 304 SUPERFAMILY SSF46785 1 86 8.55E-26 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_4970 b87bbe8931eeeb6e5cb100305865b4e8 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 5.9E-25 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_4970 b87bbe8931eeeb6e5cb100305865b4e8 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.9E-11 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_4970 b87bbe8931eeeb6e5cb100305865b4e8 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.9E-11 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_4970 b87bbe8931eeeb6e5cb100305865b4e8 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.9E-11 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_4970 b87bbe8931eeeb6e5cb100305865b4e8 304 Gene3D G3DSA:3.40.190.290 90 291 1.0E-42 T 14-10-2018 AMIS_49590 95907e3595ab427db9f68c7edcefc4a1 485 SUPERFAMILY SSF55073 328 481 6.28E-41 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_49590 95907e3595ab427db9f68c7edcefc4a1 485 Pfam PF00990 Diguanylate cyclase, GGDEF domain 323 475 6.4E-39 T 14-10-2018 IPR000160 GGDEF domain AMIS_49590 95907e3595ab427db9f68c7edcefc4a1 485 Gene3D G3DSA:3.30.70.270 309 482 1.4E-50 T 14-10-2018 AMIS_49590 95907e3595ab427db9f68c7edcefc4a1 485 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 320 478 8.7E-39 T 14-10-2018 IPR000160 GGDEF domain AMIS_49590 95907e3595ab427db9f68c7edcefc4a1 485 SMART SM00267 312 480 1.2E-55 T 14-10-2018 IPR000160 GGDEF domain AMIS_54690 f9c9d424e54619dae7fd98bee55788bc 491 Gene3D G3DSA:1.20.1440.230 317 410 7.1E-8 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_54690 f9c9d424e54619dae7fd98bee55788bc 491 SUPERFAMILY SSF142019 35 232 3.4E-35 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_54690 f9c9d424e54619dae7fd98bee55788bc 491 Pfam PF13459 4Fe-4S single cluster domain 428 483 2.1E-10 T 14-10-2018 AMIS_54690 f9c9d424e54619dae7fd98bee55788bc 491 Gene3D G3DSA:3.40.50.11540 56 223 5.0E-36 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_54690 f9c9d424e54619dae7fd98bee55788bc 491 Gene3D G3DSA:3.30.70.20 423 486 8.3E-11 T 14-10-2018 AMIS_54690 f9c9d424e54619dae7fd98bee55788bc 491 SUPERFAMILY SSF54862 427 485 7.78E-8 T 14-10-2018 AMIS_54690 f9c9d424e54619dae7fd98bee55788bc 491 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 321 399 4.0E-16 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_54690 f9c9d424e54619dae7fd98bee55788bc 491 SUPERFAMILY SSF140490 314 409 3.01E-15 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_54690 f9c9d424e54619dae7fd98bee55788bc 491 SUPERFAMILY SSF142984 235 308 6.02E-7 T 14-10-2018 AMIS_54690 f9c9d424e54619dae7fd98bee55788bc 491 SMART SM00928 317 362 3.9E-4 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_54690 f9c9d424e54619dae7fd98bee55788bc 491 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 53 210 9.4E-28 T 14-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_54690 f9c9d424e54619dae7fd98bee55788bc 491 Gene3D G3DSA:3.10.20.600 224 313 5.2E-8 T 14-10-2018 AMIS_68270 f5aab15f8caf26d9c7ad6087c2f44a1c 148 SUPERFAMILY SSF55729 11 147 3.85E-31 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_68270 f5aab15f8caf26d9c7ad6087c2f44a1c 148 Pfam PF13673 Acetyltransferase (GNAT) domain 50 146 1.8E-13 T 14-10-2018 IPR000182 GNAT domain AMIS_68270 f5aab15f8caf26d9c7ad6087c2f44a1c 148 Gene3D G3DSA:3.40.630.30 7 146 4.6E-36 T 14-10-2018 AMIS_10680 a7f6413bcd13af43d362a5c2f804effb 314 SUPERFAMILY SSF56112 29 275 1.09E-23 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMIS_10680 a7f6413bcd13af43d362a5c2f804effb 314 Pfam PF01636 Phosphotransferase enzyme family 49 243 3.0E-14 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase AMIS_39810 57be7a6f17b0e27f533d9263163b2805 475 Pfam PF01494 FAD binding domain 2 332 1.1E-89 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 AMIS_39810 57be7a6f17b0e27f533d9263163b2805 475 Gene3D G3DSA:3.30.70.2450 172 255 2.0E-125 T 14-10-2018 AMIS_39810 57be7a6f17b0e27f533d9263163b2805 475 Gene3D G3DSA:3.50.50.60 3 330 2.0E-125 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_39810 57be7a6f17b0e27f533d9263163b2805 475 Gene3D G3DSA:3.40.30.120 377 469 2.7E-27 T 14-10-2018 AMIS_39810 57be7a6f17b0e27f533d9263163b2805 475 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 297 8.9E-49 T 14-10-2018 AMIS_39810 57be7a6f17b0e27f533d9263163b2805 475 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 299 317 8.9E-49 T 14-10-2018 AMIS_39810 57be7a6f17b0e27f533d9263163b2805 475 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 317 333 8.9E-49 T 14-10-2018 AMIS_39810 57be7a6f17b0e27f533d9263163b2805 475 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 3 25 8.9E-49 T 14-10-2018 AMIS_39810 57be7a6f17b0e27f533d9263163b2805 475 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 266 281 8.9E-49 T 14-10-2018 AMIS_39810 57be7a6f17b0e27f533d9263163b2805 475 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 143 158 8.9E-49 T 14-10-2018 AMIS_39810 57be7a6f17b0e27f533d9263163b2805 475 SUPERFAMILY SSF51905 2 349 9.23E-66 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_38970 9a05980b9dbfb762b5ec1d4883f564ea 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 5.5E-21 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_38970 9a05980b9dbfb762b5ec1d4883f564ea 299 Gene3D G3DSA:1.10.10.10 1 83 2.6E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_38970 9a05980b9dbfb762b5ec1d4883f564ea 299 SUPERFAMILY SSF46785 1 83 3.08E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_38970 9a05980b9dbfb762b5ec1d4883f564ea 299 Pfam PF03466 LysR substrate binding domain 88 292 1.7E-39 T 14-10-2018 IPR005119 LysR, substrate-binding AMIS_38970 9a05980b9dbfb762b5ec1d4883f564ea 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.3E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_38970 9a05980b9dbfb762b5ec1d4883f564ea 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.3E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_38970 9a05980b9dbfb762b5ec1d4883f564ea 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.3E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_38970 9a05980b9dbfb762b5ec1d4883f564ea 299 SUPERFAMILY SSF53850 88 294 1.88E-40 T 14-10-2018 AMIS_38970 9a05980b9dbfb762b5ec1d4883f564ea 299 Gene3D G3DSA:3.40.190.290 90 297 4.3E-44 T 14-10-2018 AMIS_53070 bcb71a88562d4d8fdcfd6b820f335c50 293 Pfam PF09992 Phosphodiester glycosidase 111 291 3.8E-33 T 14-10-2018 IPR018711 Phosphodiester glycosidase AMIS_7320 5a25cdde8ed950a10f48f6f68cd4412c 331 Gene3D G3DSA:3.20.20.80 55 326 2.9E-49 T 14-10-2018 AMIS_7320 5a25cdde8ed950a10f48f6f68cd4412c 331 SUPERFAMILY SSF51445 84 301 1.04E-31 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_7320 5a25cdde8ed950a10f48f6f68cd4412c 331 Pfam PF02156 Glycosyl hydrolase family 26 127 232 1.2E-4 T 14-10-2018 IPR022790 Glycosyl hydrolase family 26 domain GO:0004553 AMIS_69720 84ad8e56f337854a8260e5650e639e3e 104 Pfam PF13466 STAS domain 18 89 3.8E-9 T 14-10-2018 IPR002645 STAS domain AMIS_69720 84ad8e56f337854a8260e5650e639e3e 104 Gene3D G3DSA:3.30.750.24 4 104 6.8E-15 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_69720 84ad8e56f337854a8260e5650e639e3e 104 SUPERFAMILY SSF52091 11 102 1.55E-12 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_69310 fba8834027393ee4efeeb239d66a8428 161 SUPERFAMILY SSF54909 19 115 2.19E-13 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel AMIS_69310 fba8834027393ee4efeeb239d66a8428 161 Pfam PF11695 Domain of unknown function (DUF3291) 6 143 6.9E-52 T 14-10-2018 IPR021708 Domain of unknown function DUF3291 AMIS_78300 42a5528ef101969bfc14bd7d3673061f 812 SUPERFAMILY SSF56601 247 720 1.59E-59 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMIS_78300 42a5528ef101969bfc14bd7d3673061f 812 Gene3D G3DSA:3.30.10.20 726 785 3.3E-12 T 14-10-2018 AMIS_78300 42a5528ef101969bfc14bd7d3673061f 812 Gene3D G3DSA:3.40.710.10 315 723 1.4E-58 T 14-10-2018 AMIS_78300 42a5528ef101969bfc14bd7d3673061f 812 Gene3D G3DSA:1.10.3810.10 69 280 6.0E-67 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMIS_78300 42a5528ef101969bfc14bd7d3673061f 812 Pfam PF00912 Transglycosylase 78 261 2.1E-56 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMIS_78300 42a5528ef101969bfc14bd7d3673061f 812 Pfam PF00905 Penicillin binding protein transpeptidase domain 427 654 1.5E-18 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AMIS_78300 42a5528ef101969bfc14bd7d3673061f 812 SMART SM00740 720 784 8.4E-4 T 14-10-2018 IPR005543 PASTA domain AMIS_78300 42a5528ef101969bfc14bd7d3673061f 812 SUPERFAMILY SSF53955 63 290 3.37E-64 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily AMIS_45930 36982c76544278f7f1537e2bff5844b9 306 Gene3D G3DSA:3.80.10.10 30 306 6.1E-88 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily AMIS_45930 36982c76544278f7f1537e2bff5844b9 306 Pfam PF13516 Leucine Rich repeat 233 251 0.0064 T 14-10-2018 IPR001611 Leucine-rich repeat GO:0005515 AMIS_45930 36982c76544278f7f1537e2bff5844b9 306 SUPERFAMILY SSF52047 99 280 4.06E-15 T 14-10-2018 AMIS_30640 e8c9a89b89204d338c6da04c15371da2 342 Gene3D G3DSA:3.60.10.10 38 292 1.7E-27 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AMIS_30640 e8c9a89b89204d338c6da04c15371da2 342 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 43 286 7.3E-9 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase AMIS_30640 e8c9a89b89204d338c6da04c15371da2 342 SUPERFAMILY SSF56219 38 290 1.13E-23 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AMIS_43610 ab650fb4c334891bf0ef971177d09906 321 Pfam PF00106 short chain dehydrogenase 18 219 7.9E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_43610 ab650fb4c334891bf0ef971177d09906 321 Gene3D G3DSA:3.40.50.720 2 302 5.0E-69 T 14-10-2018 AMIS_43610 ab650fb4c334891bf0ef971177d09906 321 SUPERFAMILY SSF51735 15 261 1.28E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_43610 ab650fb4c334891bf0ef971177d09906 321 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 196 8.6E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_43610 ab650fb4c334891bf0ef971177d09906 321 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 200 217 8.6E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_43610 ab650fb4c334891bf0ef971177d09906 321 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 18 35 8.6E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_43610 ab650fb4c334891bf0ef971177d09906 321 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 94 105 8.6E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_53200 294bf4b37d2d61ef589f13914baaa5c6 447 Pfam PF07730 Histidine kinase 220 286 4.8E-16 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMIS_53200 294bf4b37d2d61ef589f13914baaa5c6 447 Gene3D G3DSA:3.30.565.10 287 407 9.7E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_53200 294bf4b37d2d61ef589f13914baaa5c6 447 SUPERFAMILY SSF55874 295 407 3.92E-13 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_53200 294bf4b37d2d61ef589f13914baaa5c6 447 Pfam PF13796 Putative sensor 29 195 1.5E-29 T 14-10-2018 IPR025828 Putative sensor domain AMIS_80650 07dfbacd5c45bcd8c871e5d13c7db927 167 Pfam PF00583 Acetyltransferase (GNAT) family 27 134 1.4E-10 T 14-10-2018 IPR000182 GNAT domain AMIS_80650 07dfbacd5c45bcd8c871e5d13c7db927 167 Gene3D G3DSA:3.40.630.30 5 157 6.9E-19 T 14-10-2018 AMIS_80650 07dfbacd5c45bcd8c871e5d13c7db927 167 SUPERFAMILY SSF55729 2 141 6.73E-18 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_36950 e09f3b08b8bb8bd6ca949a0e1178d70d 264 Gene3D G3DSA:3.40.50.150 82 258 1.5E-41 T 14-10-2018 AMIS_36950 e09f3b08b8bb8bd6ca949a0e1178d70d 264 SUPERFAMILY SSF53335 96 247 1.79E-33 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_36950 e09f3b08b8bb8bd6ca949a0e1178d70d 264 Pfam PF13649 Methyltransferase domain 101 191 9.0E-22 T 14-10-2018 AMIS_2830 25755cae194909e3cebdd25043ccc754 121 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 22 120 2.8E-35 T 14-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_2830 25755cae194909e3cebdd25043ccc754 121 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 2 121 19.09 T 14-10-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 AMIS_2830 25755cae194909e3cebdd25043ccc754 121 Gene3D G3DSA:1.20.58.1610 1 121 1.8E-40 T 14-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_51340 4ba77118a502ab4fe1686b889e843fe5 455 Gene3D G3DSA:2.60.120.200 53 203 1.7E-11 T 14-10-2018 AMIS_51340 4ba77118a502ab4fe1686b889e843fe5 455 SUPERFAMILY SSF49899 129 183 9.5E-5 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily AMIS_2990 97ee45173c19ab772c5948854477dad7 264 Pfam PF01614 Bacterial transcriptional regulator 143 257 7.8E-17 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal AMIS_2990 97ee45173c19ab772c5948854477dad7 264 SMART SM00346 12 98 0.0031 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AMIS_2990 97ee45173c19ab772c5948854477dad7 264 Gene3D G3DSA:1.10.10.10 3 72 7.7E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_2990 97ee45173c19ab772c5948854477dad7 264 Gene3D G3DSA:3.30.450.40 91 263 9.0E-24 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_2990 97ee45173c19ab772c5948854477dad7 264 Pfam PF09339 IclR helix-turn-helix domain 14 61 1.9E-13 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AMIS_2990 97ee45173c19ab772c5948854477dad7 264 SUPERFAMILY SSF46785 12 76 1.7E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_2990 97ee45173c19ab772c5948854477dad7 264 SUPERFAMILY SSF55781 90 256 3.27E-22 T 14-10-2018 AMIS_12420 f2833ff7280ae2537bea0da6eef14477 309 SUPERFAMILY SSF116726 72 143 8.89E-11 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AMIS_12420 f2833ff7280ae2537bea0da6eef14477 309 Pfam PF02080 TrkA-C domain 80 142 2.1E-11 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AMIS_12420 f2833ff7280ae2537bea0da6eef14477 309 Gene3D G3DSA:3.30.70.1450 70 144 4.2E-10 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AMIS_15290 a4bdf650f7f954fabad42ac0bbf70f52 101 Pfam PF02325 YGGT family 11 91 6.4E-12 T 14-10-2018 IPR003425 CCB3/YggT GO:0016020 AMIS_55840 41c917463a1b72faf5c53435eeeef487 161 Gene3D G3DSA:3.30.530.20 3 161 2.1E-44 T 14-10-2018 IPR023393 START-like domain superfamily AMIS_55840 41c917463a1b72faf5c53435eeeef487 161 SUPERFAMILY SSF55961 10 160 1.39E-33 T 14-10-2018 AMIS_55840 41c917463a1b72faf5c53435eeeef487 161 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 23 159 1.6E-22 T 14-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like AMIS_54740 78398404f8fade97ac10190e6659ccc3 508 Gene3D G3DSA:3.30.450.40 169 338 2.9E-17 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_54740 78398404f8fade97ac10190e6659ccc3 508 Pfam PF13185 GAF domain 184 326 1.6E-11 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_54740 78398404f8fade97ac10190e6659ccc3 508 Gene3D G3DSA:3.30.70.270 339 507 5.2E-57 T 14-10-2018 AMIS_54740 78398404f8fade97ac10190e6659ccc3 508 SUPERFAMILY SSF55073 351 503 7.32E-49 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_54740 78398404f8fade97ac10190e6659ccc3 508 SMART SM00065 184 336 3.3E-9 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_54740 78398404f8fade97ac10190e6659ccc3 508 SMART SM00267 335 508 6.1E-63 T 14-10-2018 IPR000160 GGDEF domain AMIS_54740 78398404f8fade97ac10190e6659ccc3 508 SUPERFAMILY SSF55781 185 336 1.83E-17 T 14-10-2018 AMIS_54740 78398404f8fade97ac10190e6659ccc3 508 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 342 500 4.2E-42 T 14-10-2018 IPR000160 GGDEF domain AMIS_54740 78398404f8fade97ac10190e6659ccc3 508 Pfam PF00990 Diguanylate cyclase, GGDEF domain 346 500 2.0E-46 T 14-10-2018 IPR000160 GGDEF domain AMIS_75800 99bea78e0c34284fc685cac6480839ee 528 Gene3D G3DSA:3.30.950.10 124 244 2.2E-9 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 AMIS_75800 99bea78e0c34284fc685cac6480839ee 528 Pfam PF02602 Uroporphyrinogen-III synthase HemD 262 493 1.1E-64 T 14-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMIS_75800 99bea78e0c34284fc685cac6480839ee 528 Gene3D G3DSA:3.40.50.10090 280 420 4.2E-53 T 14-10-2018 AMIS_75800 99bea78e0c34284fc685cac6480839ee 528 SUPERFAMILY SSF53790 8 251 1.14E-38 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 AMIS_75800 99bea78e0c34284fc685cac6480839ee 528 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 12 211 5.2E-32 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 AMIS_75800 99bea78e0c34284fc685cac6480839ee 528 Gene3D G3DSA:3.40.50.10090 251 489 4.2E-53 T 14-10-2018 AMIS_75800 99bea78e0c34284fc685cac6480839ee 528 Gene3D G3DSA:3.40.1010.10 1 122 1.0E-24 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 AMIS_75800 99bea78e0c34284fc685cac6480839ee 528 SUPERFAMILY SSF69618 248 498 4.58E-69 T 14-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMIS_44230 b354114ff3ca3e38daa204808eec26a4 522 Pfam PF01186 Lysyl oxidase 368 505 5.3E-14 T 14-10-2018 IPR001695 Lysyl oxidase GO:0005507|GO:0016641|GO:0055114 Reactome: R-HSA-1566948|Reactome: R-HSA-2243919 AMIS_76490 b594f28c06be6611599bf5a0e74868d8 120 SMART SM00448 1 115 1.2E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_76490 b594f28c06be6611599bf5a0e74868d8 120 Pfam PF00072 Response regulator receiver domain 3 112 1.0E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_76490 b594f28c06be6611599bf5a0e74868d8 120 Gene3D G3DSA:3.40.50.2300 1 119 2.8E-31 T 14-10-2018 AMIS_76490 b594f28c06be6611599bf5a0e74868d8 120 SUPERFAMILY SSF52172 1 118 2.42E-32 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_71000 ef6eedb683c065ee49360b642b044191 250 SUPERFAMILY SSF56281 3 230 1.6E-23 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMIS_71000 ef6eedb683c065ee49360b642b044191 250 Pfam PF12706 Beta-lactamase superfamily domain 21 217 8.6E-16 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMIS_71000 ef6eedb683c065ee49360b642b044191 250 Gene3D G3DSA:3.60.15.10 1 246 1.3E-48 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMIS_48880 dc87d09f21d96c5274cc3a762a24d411 105 Pfam PF00893 Small Multidrug Resistance protein 1 90 9.9E-29 T 14-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 AMIS_48880 dc87d09f21d96c5274cc3a762a24d411 105 Gene3D G3DSA:1.10.3730.20 1 105 2.6E-36 T 14-10-2018 AMIS_48880 dc87d09f21d96c5274cc3a762a24d411 105 SUPERFAMILY SSF103481 2 102 1.02E-19 T 14-10-2018 AMIS_46960 c714b69b181cac359bc6b6c8cee49bff 172 Pfam PF01476 LysM domain 125 171 5.7E-13 T 14-10-2018 IPR018392 LysM domain AMIS_46960 c714b69b181cac359bc6b6c8cee49bff 172 Pfam PF06737 Transglycosylase-like domain 21 96 4.4E-34 T 14-10-2018 IPR010618 Transglycosylase-like AMIS_46960 c714b69b181cac359bc6b6c8cee49bff 172 Gene3D G3DSA:1.10.530.10 5 103 2.8E-38 T 14-10-2018 AMIS_46960 c714b69b181cac359bc6b6c8cee49bff 172 SUPERFAMILY SSF54106 123 171 7.32E-8 T 14-10-2018 AMIS_46960 c714b69b181cac359bc6b6c8cee49bff 172 SUPERFAMILY SSF53955 21 102 1.13E-31 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily AMIS_46960 c714b69b181cac359bc6b6c8cee49bff 172 SMART SM00257 124 172 1.3E-8 T 14-10-2018 IPR018392 LysM domain AMIS_46960 c714b69b181cac359bc6b6c8cee49bff 172 Gene3D G3DSA:3.10.350.10 123 170 8.3E-14 T 14-10-2018 IPR036779 LysM domain superfamily AMIS_5670 7d87ead2f534c6c52218c0b52fe6dcf4 636 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 33 603 3.4E-143 T 14-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_5670 7d87ead2f534c6c52218c0b52fe6dcf4 636 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 84 109 1.1E-45 T 14-10-2018 AMIS_5670 7d87ead2f534c6c52218c0b52fe6dcf4 636 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 112 132 1.1E-45 T 14-10-2018 AMIS_5670 7d87ead2f534c6c52218c0b52fe6dcf4 636 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 222 243 1.1E-45 T 14-10-2018 AMIS_5670 7d87ead2f534c6c52218c0b52fe6dcf4 636 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 159 180 1.1E-45 T 14-10-2018 AMIS_5670 7d87ead2f534c6c52218c0b52fe6dcf4 636 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 312 324 1.1E-45 T 14-10-2018 AMIS_5670 7d87ead2f534c6c52218c0b52fe6dcf4 636 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 423 442 1.1E-45 T 14-10-2018 AMIS_5670 7d87ead2f534c6c52218c0b52fe6dcf4 636 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 244 270 1.1E-45 T 14-10-2018 AMIS_5670 7d87ead2f534c6c52218c0b52fe6dcf4 636 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 72 120 1.3E-8 T 14-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_5670 7d87ead2f534c6c52218c0b52fe6dcf4 636 Pfam PF00361 Proton-conducting membrane transporter 135 404 2.2E-79 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_18090 3a129ae717a3f147589c3e53eae04b1e 450 Gene3D G3DSA:3.40.630.10 17 426 1.7E-103 T 14-10-2018 AMIS_18090 3a129ae717a3f147589c3e53eae04b1e 450 Pfam PF07687 Peptidase dimerisation domain 194 343 6.7E-12 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain AMIS_18090 3a129ae717a3f147589c3e53eae04b1e 450 Pfam PF01546 Peptidase family M20/M25/M40 84 441 1.1E-33 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 AMIS_18090 3a129ae717a3f147589c3e53eae04b1e 450 SUPERFAMILY SSF53187 5 443 6.57E-53 T 14-10-2018 AMIS_18090 3a129ae717a3f147589c3e53eae04b1e 450 Gene3D G3DSA:3.30.70.360 201 362 1.7E-103 T 14-10-2018 AMIS_31780 368526f47a8082aac99ba11c622b89c8 108 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 20 104 1.0E-15 T 14-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 AMIS_31780 368526f47a8082aac99ba11c622b89c8 108 SUPERFAMILY SSF52091 19 105 4.12E-18 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_31780 368526f47a8082aac99ba11c622b89c8 108 Gene3D G3DSA:3.30.750.24 8 108 6.0E-22 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_31780 368526f47a8082aac99ba11c622b89c8 108 Pfam PF13466 STAS domain 22 101 1.3E-15 T 14-10-2018 IPR002645 STAS domain AMIS_28080 7264a792f0d3fdc1433388f886fac2e5 563 Gene3D G3DSA:2.60.120.260 428 562 1.9E-25 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_28080 7264a792f0d3fdc1433388f886fac2e5 563 Gene3D G3DSA:3.20.20.80 96 317 5.6E-17 T 14-10-2018 AMIS_28080 7264a792f0d3fdc1433388f886fac2e5 563 SUPERFAMILY SSF49785 427 562 4.68E-12 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_28080 7264a792f0d3fdc1433388f886fac2e5 563 SUPERFAMILY SSF51445 113 316 6.12E-23 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_28080 7264a792f0d3fdc1433388f886fac2e5 563 Pfam PF16990 Carbohydrate binding module (family 35) 431 562 7.5E-8 T 14-10-2018 IPR005084 Carbohydrate binding module family 6 GO:0030246 AMIS_54370 df5d3d4c0d715c00ec3919b6b8571dca 258 SUPERFAMILY SSF56219 1 257 2.62E-66 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AMIS_54370 df5d3d4c0d715c00ec3919b6b8571dca 258 Gene3D G3DSA:3.60.10.10 1 257 4.9E-65 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AMIS_54370 df5d3d4c0d715c00ec3919b6b8571dca 258 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 255 4.8E-59 T 14-10-2018 AMIS_54370 df5d3d4c0d715c00ec3919b6b8571dca 258 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 14-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 AMIS_54370 df5d3d4c0d715c00ec3919b6b8571dca 258 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 249 4.0E-20 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase AMIS_54370 df5d3d4c0d715c00ec3919b6b8571dca 258 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 257 3.4E-72 T 14-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 AMIS_27830 bd135b7fcffa2192f74018d8775d4b1c 136 Gene3D G3DSA:2.60.120.10 36 135 1.6E-14 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMIS_27830 bd135b7fcffa2192f74018d8775d4b1c 136 Pfam PF07883 Cupin domain 61 130 1.4E-9 T 14-10-2018 IPR013096 Cupin 2, conserved barrel AMIS_27830 bd135b7fcffa2192f74018d8775d4b1c 136 SUPERFAMILY SSF51182 3 135 9.9E-19 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily AMIS_75680 19e5229e63ee31f111f3e5ad4fff53ef 167 Gene3D G3DSA:3.30.530.20 21 165 1.5E-11 T 14-10-2018 IPR023393 START-like domain superfamily AMIS_75680 19e5229e63ee31f111f3e5ad4fff53ef 167 SUPERFAMILY SSF55961 22 163 1.38E-16 T 14-10-2018 AMIS_75680 19e5229e63ee31f111f3e5ad4fff53ef 167 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 22 141 1.1E-8 T 14-10-2018 IPR019587 Polyketide cyclase/dehydrase AMIS_36830 358cc17c859a10461edf607bfde90f78 319 SUPERFAMILY SSF102198 98 318 7.72E-23 T 14-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 AMIS_36830 358cc17c859a10461edf607bfde90f78 319 Gene3D G3DSA:3.50.30.50 74 319 8.5E-22 T 14-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 AMIS_36830 358cc17c859a10461edf607bfde90f78 319 Pfam PF04199 Putative cyclase 78 250 6.2E-23 T 14-10-2018 IPR007325 Kynurenine formamidase/cyclase-like GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 AMIS_43920 6de987e8deef152af7eb6278b86d0bf8 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 1.5E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_43920 6de987e8deef152af7eb6278b86d0bf8 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 18 33 1.5E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_43920 6de987e8deef152af7eb6278b86d0bf8 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 1.5E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_43920 6de987e8deef152af7eb6278b86d0bf8 103 Pfam PF12840 Helix-turn-helix domain 17 73 1.2E-12 T 14-10-2018 AMIS_43920 6de987e8deef152af7eb6278b86d0bf8 103 Gene3D G3DSA:1.10.10.10 4 97 1.5E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_43920 6de987e8deef152af7eb6278b86d0bf8 103 SMART SM00418 16 93 6.2E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_43920 6de987e8deef152af7eb6278b86d0bf8 103 SUPERFAMILY SSF46785 10 91 3.47E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_23190 df4dd8d3c0dafa0206abdb076d9d5002 325 SUPERFAMILY SSF103481 52 151 1.44E-8 T 14-10-2018 AMIS_23190 df4dd8d3c0dafa0206abdb076d9d5002 325 Pfam PF00892 EamA-like transporter family 159 292 4.5E-19 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMIS_23190 df4dd8d3c0dafa0206abdb076d9d5002 325 Pfam PF00892 EamA-like transporter family 22 148 6.2E-13 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMIS_23190 df4dd8d3c0dafa0206abdb076d9d5002 325 SUPERFAMILY SSF103481 200 293 1.03E-15 T 14-10-2018 AMIS_29260 cd80a8522f0eb898c4744bd269cd72dd 351 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 343 2.7E-86 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AMIS_29260 cd80a8522f0eb898c4744bd269cd72dd 351 TIGRFAM TIGR02089 TTC: tartrate dehydrogenase 1 347 1.5E-156 T 14-10-2018 IPR011829 Tartrate dehydrogenase GO:0016616|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.93|KEGG: 00650+1.1.1.83 AMIS_29260 cd80a8522f0eb898c4744bd269cd72dd 351 Gene3D G3DSA:3.40.718.10 1 350 6.4E-125 T 14-10-2018 AMIS_29260 cd80a8522f0eb898c4744bd269cd72dd 351 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 238 257 - T 14-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 AMIS_29260 cd80a8522f0eb898c4744bd269cd72dd 351 SUPERFAMILY SSF53659 3 348 2.3E-114 T 14-10-2018 AMIS_29260 cd80a8522f0eb898c4744bd269cd72dd 351 SMART SM01329 5 344 6.8E-162 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AMIS_71440 f43bb049c575db81bdff1fbf6e2a73d1 258 SUPERFAMILY SSF52402 1 252 1.36E-70 T 14-10-2018 AMIS_71440 f43bb049c575db81bdff1fbf6e2a73d1 258 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 14-10-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 AMIS_71440 f43bb049c575db81bdff1fbf6e2a73d1 258 PIRSF PIRSF000090 1 258 1.2E-79 T 14-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 AMIS_71440 f43bb049c575db81bdff1fbf6e2a73d1 258 Pfam PF01012 Electron transfer flavoprotein domain 25 206 2.9E-48 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AMIS_71440 f43bb049c575db81bdff1fbf6e2a73d1 258 SMART SM00893 22 211 3.4E-56 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AMIS_71440 f43bb049c575db81bdff1fbf6e2a73d1 258 Gene3D G3DSA:3.40.50.620 1 258 2.0E-81 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMIS_38330 59c59ca47a6bc07bece089bade4b7fc5 288 Gene3D G3DSA:1.25.40.10 7 238 5.0E-27 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_38330 59c59ca47a6bc07bece089bade4b7fc5 288 SUPERFAMILY SSF48452 17 182 8.32E-22 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_38330 59c59ca47a6bc07bece089bade4b7fc5 288 Pfam PF13432 Tetratricopeptide repeat 52 114 4.6E-6 T 14-10-2018 AMIS_54100 a3cab660c0c4889a6af1eea34b308f84 261 Pfam PF01904 Protein of unknown function DUF72 27 240 1.2E-58 T 14-10-2018 IPR002763 Protein of unknown function DUF72 AMIS_54100 a3cab660c0c4889a6af1eea34b308f84 261 SUPERFAMILY SSF117396 1 241 4.05E-75 T 14-10-2018 IPR036520 UPF0759 superfamily AMIS_54100 a3cab660c0c4889a6af1eea34b308f84 261 Gene3D G3DSA:3.20.20.410 1 244 7.5E-67 T 14-10-2018 IPR036520 UPF0759 superfamily AMIS_74330 40690eabca8a404bb8fcd1f304a1618e 472 SUPERFAMILY SSF88723 48 182 1.08E-8 T 14-10-2018 IPR029060 PIN-like domain superfamily AMIS_74330 40690eabca8a404bb8fcd1f304a1618e 472 Pfam PF13638 PIN domain 48 186 5.8E-28 T 14-10-2018 IPR002716 PIN domain AMIS_74330 40690eabca8a404bb8fcd1f304a1618e 472 Gene3D G3DSA:3.40.50.300 261 468 2.8E-52 T 14-10-2018 AMIS_74330 40690eabca8a404bb8fcd1f304a1618e 472 Gene3D G3DSA:3.40.50.1010 44 187 2.1E-19 T 14-10-2018 AMIS_74330 40690eabca8a404bb8fcd1f304a1618e 472 SMART SM00670 46 173 5.1E-15 T 14-10-2018 IPR002716 PIN domain AMIS_74330 40690eabca8a404bb8fcd1f304a1618e 472 SUPERFAMILY SSF52540 261 423 5.5E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_74330 40690eabca8a404bb8fcd1f304a1618e 472 Pfam PF02562 PhoH-like protein 263 466 7.1E-54 T 14-10-2018 IPR003714 PhoH-like protein GO:0005524 AMIS_46610 1821471d6c78828b533dc298ba8f1141 185 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 68 2.5E-15 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_46610 1821471d6c78828b533dc298ba8f1141 185 SUPERFAMILY SSF46689 9 84 6.98E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_46610 1821471d6c78828b533dc298ba8f1141 185 Gene3D G3DSA:1.10.357.10 7 185 1.0E-51 T 14-10-2018 AMIS_46610 1821471d6c78828b533dc298ba8f1141 185 SUPERFAMILY SSF48498 87 184 9.27E-15 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_46610 1821471d6c78828b533dc298ba8f1141 185 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 6.1E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_46610 1821471d6c78828b533dc298ba8f1141 185 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 6.1E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_49020 c21b9702024efc6a50e447e2bd2f9c0e 405 SUPERFAMILY SSF53474 104 386 2.95E-22 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_49020 c21b9702024efc6a50e447e2bd2f9c0e 405 Pfam PF03403 Platelet-activating factor acetylhydrolase, isoform II 137 343 5.2E-13 T 14-10-2018 IPR005065 Platelet-activating factor acetylhydrolase-like GO:0003847|GO:0016042 KEGG: 00565+3.1.1.47 AMIS_49020 c21b9702024efc6a50e447e2bd2f9c0e 405 Gene3D G3DSA:3.40.50.1820 41 393 7.0E-80 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_44550 b529181e53b9c73a0df2d55caf424688 119 SUPERFAMILY SSF48371 10 107 3.45E-6 T 14-10-2018 IPR016024 Armadillo-type fold AMIS_44550 b529181e53b9c73a0df2d55caf424688 119 Gene3D G3DSA:1.25.10.10 2 115 3.9E-6 T 14-10-2018 IPR011989 Armadillo-like helical AMIS_50050 f9f5fc685a23d47d929829e365d2389d 326 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 2 315 1.7E-86 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AMIS_50050 f9f5fc685a23d47d929829e365d2389d 326 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 4 215 6.3E-49 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AMIS_44620 8a767d80b4a141b38f89f67045f5ef18 348 Pfam PF01497 Periplasmic binding protein 73 322 2.5E-23 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain AMIS_44620 8a767d80b4a141b38f89f67045f5ef18 348 Gene3D G3DSA:3.40.50.1980 51 159 8.5E-18 T 14-10-2018 AMIS_44620 8a767d80b4a141b38f89f67045f5ef18 348 Gene3D G3DSA:3.40.50.1980 163 347 8.6E-34 T 14-10-2018 AMIS_44620 8a767d80b4a141b38f89f67045f5ef18 348 SUPERFAMILY SSF53807 50 334 1.65E-46 T 14-10-2018 AMIS_17200 4596639a02c3a4252e9509dc588de4c4 719 Gene3D G3DSA:2.160.20.10 371 719 8.5E-73 T 14-10-2018 IPR012334 Pectin lyase fold AMIS_17200 4596639a02c3a4252e9509dc588de4c4 719 Pfam PF04542 Sigma-70 region 2 43 109 3.4E-13 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_17200 4596639a02c3a4252e9509dc588de4c4 719 SUPERFAMILY SSF51126 378 691 3.53E-50 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor AMIS_17200 4596639a02c3a4252e9509dc588de4c4 719 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 39 199 2.1E-21 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_17200 4596639a02c3a4252e9509dc588de4c4 719 Gene3D G3DSA:1.10.1740.10 18 129 5.8E-19 T 14-10-2018 AMIS_17200 4596639a02c3a4252e9509dc588de4c4 719 SUPERFAMILY SSF88946 23 120 8.01E-21 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_17200 4596639a02c3a4252e9509dc588de4c4 719 Pfam PF13229 Right handed beta helix region 473 631 6.1E-10 T 14-10-2018 IPR039448 Right handed beta helix domain AMIS_17200 4596639a02c3a4252e9509dc588de4c4 719 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 65 96 - T 14-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_17200 4596639a02c3a4252e9509dc588de4c4 719 SMART SM00710 546 568 23.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMIS_17200 4596639a02c3a4252e9509dc588de4c4 719 SMART SM00710 496 518 1700.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMIS_17200 4596639a02c3a4252e9509dc588de4c4 719 SMART SM00710 521 543 270.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMIS_17200 4596639a02c3a4252e9509dc588de4c4 719 SMART SM00710 473 495 9800.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMIS_17200 4596639a02c3a4252e9509dc588de4c4 719 SMART SM00710 622 644 2500.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMIS_67730 f1e9e1cb98b30410b0ab7ba464417867 543 SUPERFAMILY SSF51905 1 503 4.54E-49 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_67730 f1e9e1cb98b30410b0ab7ba464417867 543 Pfam PF05199 GMC oxidoreductase 440 497 3.7E-17 T 14-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 AMIS_67730 f1e9e1cb98b30410b0ab7ba464417867 543 Pfam PF00732 GMC oxidoreductase 4 259 2.8E-7 T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AMIS_67730 f1e9e1cb98b30410b0ab7ba464417867 543 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 1.9E-6 T 14-10-2018 AMIS_67730 f1e9e1cb98b30410b0ab7ba464417867 543 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 443 458 1.9E-6 T 14-10-2018 AMIS_67730 f1e9e1cb98b30410b0ab7ba464417867 543 Gene3D G3DSA:3.50.50.60 414 503 2.2E-22 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_67730 f1e9e1cb98b30410b0ab7ba464417867 543 Gene3D G3DSA:3.50.50.60 180 311 2.6E-21 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_67730 f1e9e1cb98b30410b0ab7ba464417867 543 Gene3D G3DSA:3.50.50.60 2 139 1.1E-26 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_11160 63f889e4136a3c47224b797c8b4fb21b 298 SUPERFAMILY SSF53448 4 217 6.38E-38 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_11160 63f889e4136a3c47224b797c8b4fb21b 298 Gene3D G3DSA:3.90.550.10 3 213 3.9E-34 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_11160 63f889e4136a3c47224b797c8b4fb21b 298 Pfam PF00535 Glycosyl transferase family 2 8 114 3.7E-16 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AMIS_38100 5ad5c1a035c79e0d9f606a9a2482e3f6 326 Gene3D G3DSA:3.40.190.10 84 304 5.7E-45 T 14-10-2018 AMIS_38100 5ad5c1a035c79e0d9f606a9a2482e3f6 326 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 83 304 1.2E-41 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMIS_38100 5ad5c1a035c79e0d9f606a9a2482e3f6 326 SUPERFAMILY SSF53850 69 307 9.0E-43 T 14-10-2018 AMIS_38100 5ad5c1a035c79e0d9f606a9a2482e3f6 326 SMART SM00062 75 308 7.8E-24 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMIS_38100 5ad5c1a035c79e0d9f606a9a2482e3f6 326 Gene3D G3DSA:3.40.190.10 161 263 5.7E-45 T 14-10-2018 AMIS_56130 1b476cf2345ae370f4419d7db49a7d86 265 Pfam PF01614 Bacterial transcriptional regulator 133 260 1.1E-35 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal AMIS_56130 1b476cf2345ae370f4419d7db49a7d86 265 Pfam PF09339 IclR helix-turn-helix domain 12 63 3.6E-16 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AMIS_56130 1b476cf2345ae370f4419d7db49a7d86 265 Gene3D G3DSA:3.30.450.40 80 265 2.5E-56 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_56130 1b476cf2345ae370f4419d7db49a7d86 265 SUPERFAMILY SSF55781 77 264 1.7E-48 T 14-10-2018 AMIS_56130 1b476cf2345ae370f4419d7db49a7d86 265 SUPERFAMILY SSF46785 12 84 4.62E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_56130 1b476cf2345ae370f4419d7db49a7d86 265 SMART SM00346 10 100 1.0E-27 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AMIS_56130 1b476cf2345ae370f4419d7db49a7d86 265 Gene3D G3DSA:1.10.10.10 2 79 2.9E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_27870 789ed76cbd7a05e156b40d863ab1b0ff 265 Gene3D G3DSA:3.90.850.10 48 261 2.3E-60 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AMIS_27870 789ed76cbd7a05e156b40d863ab1b0ff 265 SUPERFAMILY SSF56529 44 259 3.4E-32 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AMIS_27870 789ed76cbd7a05e156b40d863ab1b0ff 265 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 89 259 1.6E-17 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 AMIS_72860 82d657418530f1393951bf19195f1f92 134 SUPERFAMILY SSF109770 16 133 1.14E-52 T 14-10-2018 IPR036502 Nickel-containing superoxide dismutase superfamily MetaCyc: PWY-6854 AMIS_72860 82d657418530f1393951bf19195f1f92 134 Gene3D G3DSA:1.20.120.400 16 134 1.7E-47 T 14-10-2018 IPR036502 Nickel-containing superoxide dismutase superfamily MetaCyc: PWY-6854 AMIS_72860 82d657418530f1393951bf19195f1f92 134 TIGRFAM TIGR02753 sodN: superoxide dismutase, Ni 9 133 4.4E-48 T 14-10-2018 IPR014123 Superoxide dismutase, Nickel-type GO:0004784|GO:0016151|GO:0016209 MetaCyc: PWY-6854 AMIS_72860 82d657418530f1393951bf19195f1f92 134 Pfam PF09055 Nickel-containing superoxide dismutase 12 132 2.0E-46 T 14-10-2018 IPR014123 Superoxide dismutase, Nickel-type GO:0004784|GO:0016151|GO:0016209 MetaCyc: PWY-6854 AMIS_28530 1714fab00ef0904b7eb52b777f6e681a 524 SUPERFAMILY SSF55073 334 487 7.61E-44 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_28530 1714fab00ef0904b7eb52b777f6e681a 524 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 326 485 6.5E-41 T 14-10-2018 IPR000160 GGDEF domain AMIS_28530 1714fab00ef0904b7eb52b777f6e681a 524 Gene3D G3DSA:3.30.70.270 326 492 9.0E-54 T 14-10-2018 AMIS_28530 1714fab00ef0904b7eb52b777f6e681a 524 Pfam PF00990 Diguanylate cyclase, GGDEF domain 329 480 1.3E-44 T 14-10-2018 IPR000160 GGDEF domain AMIS_28530 1714fab00ef0904b7eb52b777f6e681a 524 SMART SM00267 318 486 1.5E-66 T 14-10-2018 IPR000160 GGDEF domain AMIS_55240 fece5ea95351819165f655c691e11fd6 218 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 46 217 8.0E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_55240 fece5ea95351819165f655c691e11fd6 218 Gene3D G3DSA:1.10.3720.10 4 218 4.5E-45 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_55240 fece5ea95351819165f655c691e11fd6 218 SUPERFAMILY SSF161098 10 203 7.33E-40 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_33190 26ea4c160919f1350ce5d117f1472ce5 166 Gene3D G3DSA:3.40.50.360 2 163 4.4E-18 T 14-10-2018 IPR029039 Flavoprotein-like superfamily AMIS_33190 26ea4c160919f1350ce5d117f1472ce5 166 SUPERFAMILY SSF52218 1 164 6.01E-14 T 14-10-2018 IPR029039 Flavoprotein-like superfamily AMIS_33190 26ea4c160919f1350ce5d117f1472ce5 166 Pfam PF00258 Flavodoxin 5 156 7.4E-7 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AMIS_33190 26ea4c160919f1350ce5d117f1472ce5 166 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 14-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 AMIS_16050 d98217271ff1b9597a495cba630eb698 178 SUPERFAMILY SSF50022 88 176 3.27E-22 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AMIS_16050 d98217271ff1b9597a495cba630eb698 178 Gene3D G3DSA:2.102.10.10 80 178 2.8E-24 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AMIS_16050 d98217271ff1b9597a495cba630eb698 178 Pfam PF00355 Rieske [2Fe-2S] domain 100 164 4.2E-13 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AMIS_55660 8858d9e29d8093f5875fd14d005cd4e5 342 Pfam PF02653 Branched-chain amino acid transport system / permease component 62 330 1.7E-41 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 AMIS_63940 845fe47b9fa67095e016a4e206074c13 87 Gene3D G3DSA:3.30.40.10 1 86 6.3E-24 T 14-10-2018 IPR013083 Zinc finger, RING/FYVE/PHD-type AMIS_63940 845fe47b9fa67095e016a4e206074c13 87 Pfam PF02148 Zn-finger in ubiquitin-hydrolases and other protein 36 84 8.1E-8 T 14-10-2018 IPR001607 Zinc finger, UBP-type GO:0008270 AMIS_63940 845fe47b9fa67095e016a4e206074c13 87 SUPERFAMILY SSF57850 2 84 1.18E-21 T 14-10-2018 AMIS_11840 d9ed4aaba426c64f6e02db95ac1df571 126 Gene3D G3DSA:3.40.140.10 17 125 2.3E-7 T 14-10-2018 AMIS_11840 d9ed4aaba426c64f6e02db95ac1df571 126 SUPERFAMILY SSF53927 25 93 2.6E-8 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AMIS_28020 bf7524c57f37e1b20d1096fb0d2aa69c 279 SUPERFAMILY SSF52096 5 252 2.67E-49 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMIS_28020 bf7524c57f37e1b20d1096fb0d2aa69c 279 Gene3D G3DSA:3.90.226.10 1 278 3.3E-83 T 14-10-2018 AMIS_28020 bf7524c57f37e1b20d1096fb0d2aa69c 279 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 221 6.5E-30 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AMIS_55640 d5fe0a70983b2c51bf49728a105f8bb8 240 Pfam PF02210 Laminin G domain 114 211 1.5E-6 T 14-10-2018 IPR001791 Laminin G domain AMIS_55640 d5fe0a70983b2c51bf49728a105f8bb8 240 Gene3D G3DSA:2.60.120.200 30 233 1.5E-12 T 14-10-2018 AMIS_55640 d5fe0a70983b2c51bf49728a105f8bb8 240 SUPERFAMILY SSF49899 32 233 3.89E-15 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily AMIS_30330 3c812920eed5d915bd34bf337b2449ab 227 SUPERFAMILY SSF52172 2 182 3.37E-40 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_30330 3c812920eed5d915bd34bf337b2449ab 227 SMART SM00862 148 219 7.6E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_30330 3c812920eed5d915bd34bf337b2449ab 227 SMART SM00448 1 115 2.0E-39 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_30330 3c812920eed5d915bd34bf337b2449ab 227 Gene3D G3DSA:3.40.50.2300 1 120 7.9E-36 T 14-10-2018 AMIS_30330 3c812920eed5d915bd34bf337b2449ab 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 218 4.7E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_30330 3c812920eed5d915bd34bf337b2449ab 227 Pfam PF00072 Response regulator receiver domain 3 115 6.2E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_30330 3c812920eed5d915bd34bf337b2449ab 227 Gene3D G3DSA:1.10.10.10 121 225 2.3E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_48460 fdd648fa0bcc10219e7fb2f29bc7bc20 399 Gene3D G3DSA:3.60.21.10 168 363 1.7E-15 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like AMIS_48460 fdd648fa0bcc10219e7fb2f29bc7bc20 399 Pfam PF00149 Calcineurin-like phosphoesterase 169 337 7.1E-9 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AMIS_48460 fdd648fa0bcc10219e7fb2f29bc7bc20 399 SUPERFAMILY SSF56300 169 394 2.78E-31 T 14-10-2018 AMIS_27100 4973607732ce2c2e458f309a3506742d 206 Gene3D G3DSA:1.10.357.10 14 202 4.2E-30 T 14-10-2018 AMIS_27100 4973607732ce2c2e458f309a3506742d 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 29 75 1.9E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_27100 4973607732ce2c2e458f309a3506742d 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 50 73 7.6E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_27100 4973607732ce2c2e458f309a3506742d 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 42 7.6E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_27100 4973607732ce2c2e458f309a3506742d 206 SUPERFAMILY SSF46689 15 92 1.8E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_52190 75eb2675592ec43392848e6ba2945d98 410 Pfam PF07394 Protein of unknown function (DUF1501) 47 372 5.0E-30 T 14-10-2018 IPR010869 Protein of unknown function DUF1501 AMIS_57330 63fdc9a1ef3db1cf4c7dcdd650f0d016 219 Pfam PF00960 Neocarzinostatin family 31 134 1.3E-29 T 14-10-2018 IPR002186 Neocarzinostatin family GO:0003677|GO:0006952 AMIS_57330 63fdc9a1ef3db1cf4c7dcdd650f0d016 219 Gene3D G3DSA:2.60.40.230 27 140 7.4E-10 T 14-10-2018 AMIS_57330 63fdc9a1ef3db1cf4c7dcdd650f0d016 219 SUPERFAMILY SSF49319 30 115 9.68E-9 T 14-10-2018 IPR027273 Neocarzinostatin-like AMIS_17850 d7b882e20311c7dcafd2a274892a202a 580 Pfam PF01740 STAS domain 455 564 2.1E-19 T 14-10-2018 IPR002645 STAS domain AMIS_17850 d7b882e20311c7dcafd2a274892a202a 580 SUPERFAMILY SSF52091 457 568 6.28E-16 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_17850 d7b882e20311c7dcafd2a274892a202a 580 TIGRFAM TIGR00815 sulP: sulfate permease 20 564 5.7E-123 T 14-10-2018 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 AMIS_17850 d7b882e20311c7dcafd2a274892a202a 580 Pfam PF00916 Sulfate permease family 35 403 7.8E-83 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 AMIS_17850 d7b882e20311c7dcafd2a274892a202a 580 Gene3D G3DSA:3.30.750.24 435 570 5.4E-33 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_2040 582a9cc90c974be8d06ca70ad4cfb0fc 594 Pfam PF00877 NlpC/P60 family 305 398 8.9E-18 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain AMIS_2040 582a9cc90c974be8d06ca70ad4cfb0fc 594 SUPERFAMILY SSF54001 295 415 1.14E-28 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily AMIS_2040 582a9cc90c974be8d06ca70ad4cfb0fc 594 Gene3D G3DSA:3.90.1720.10 116 413 9.0E-35 T 14-10-2018 AMIS_61740 0590bfdd8f1d6d998f524797be82a920 249 SUPERFAMILY SSF55729 55 244 2.13E-23 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_61740 0590bfdd8f1d6d998f524797be82a920 249 Gene3D G3DSA:3.40.630.30 1 249 3.4E-58 T 14-10-2018 AMIS_61740 0590bfdd8f1d6d998f524797be82a920 249 Pfam PF08445 FR47-like protein 182 240 4.6E-9 T 14-10-2018 IPR013653 FR47-like GO:0016747 AMIS_28460 aec1e30ad418652f819f43279b21b304 221 SUPERFAMILY SSF49452 131 203 1.59E-9 T 14-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 AMIS_28460 aec1e30ad418652f819f43279b21b304 221 Gene3D G3DSA:2.60.40.1120 137 215 6.4E-8 T 14-10-2018 AMIS_28460 aec1e30ad418652f819f43279b21b304 221 Pfam PF13620 Carboxypeptidase regulatory-like domain 137 211 6.2E-8 T 14-10-2018 AMIS_65430 406430c23a61d8542c008ee4fca65436 315 SMART SM00046 5 130 4.2E-6 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 AMIS_65430 406430c23a61d8542c008ee4fca65436 315 Gene3D G3DSA:2.60.200.40 129 285 1.5E-36 T 14-10-2018 AMIS_65430 406430c23a61d8542c008ee4fca65436 315 Gene3D G3DSA:3.40.50.10330 2 128 4.8E-27 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 AMIS_65430 406430c23a61d8542c008ee4fca65436 315 SUPERFAMILY SSF111331 5 294 2.16E-65 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily AMIS_65430 406430c23a61d8542c008ee4fca65436 315 Pfam PF00781 Diacylglycerol kinase catalytic domain 8 126 5.8E-21 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 AMIS_42530 95677b8efb2983fa365403ca157df8af 237 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 71 185 2.8E-14 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMIS_42530 95677b8efb2983fa365403ca157df8af 237 Gene3D G3DSA:1.10.150.240 16 85 2.9E-46 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AMIS_42530 95677b8efb2983fa365403ca157df8af 237 SUPERFAMILY SSF56784 3 197 6.13E-45 T 14-10-2018 IPR036412 HAD-like superfamily AMIS_42530 95677b8efb2983fa365403ca157df8af 237 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 185 3.9E-24 T 14-10-2018 AMIS_42530 95677b8efb2983fa365403ca157df8af 237 Gene3D G3DSA:3.40.50.1000 4 203 2.9E-46 T 14-10-2018 IPR023214 HAD superfamily AMIS_42530 95677b8efb2983fa365403ca157df8af 237 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 147 167 2.8E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMIS_42530 95677b8efb2983fa365403ca157df8af 237 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 98 111 2.8E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMIS_42530 95677b8efb2983fa365403ca157df8af 237 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 129 145 2.8E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMIS_42530 95677b8efb2983fa365403ca157df8af 237 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 2.8E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMIS_17310 dd3a9228a206d16f8684450b1b181234 511 SUPERFAMILY SSF56801 14 502 6.02E-60 T 14-10-2018 AMIS_17310 dd3a9228a206d16f8684450b1b181234 511 Gene3D G3DSA:3.30.300.30 406 504 3.0E-8 T 14-10-2018 AMIS_17310 dd3a9228a206d16f8684450b1b181234 511 Gene3D G3DSA:3.40.50.12780 6 405 5.1E-44 T 14-10-2018 AMIS_17310 dd3a9228a206d16f8684450b1b181234 511 Pfam PF00501 AMP-binding enzyme 15 408 3.3E-39 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMIS_17310 dd3a9228a206d16f8684450b1b181234 511 ProSitePatterns PS00455 Putative AMP-binding domain signature. 167 178 - T 14-10-2018 IPR020845 AMP-binding, conserved site AMIS_25650 f9c3ca8287ed351de44ee848de3fc9b4 329 SUPERFAMILY SSF50118 222 323 2.83E-8 T 14-10-2018 AMIS_61090 4013433604f0a5b737724b19227b15e2 260 SUPERFAMILY SSF52540 47 242 6.01E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_61090 4013433604f0a5b737724b19227b15e2 260 Gene3D G3DSA:3.40.50.300 5 253 3.2E-90 T 14-10-2018 AMIS_61090 4013433604f0a5b737724b19227b15e2 260 PIRSF PIRSF028756 4 257 6.1E-71 T 14-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 AMIS_61090 4013433604f0a5b737724b19227b15e2 260 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 13 242 1.6E-77 T 14-10-2018 IPR022488 Polyphosphate kinase-2-related AMIS_25420 581ac21e3c38ec8efb3c874d2edce6fe 189 Gene3D G3DSA:3.30.460.10 10 178 2.9E-51 T 14-10-2018 AMIS_25420 581ac21e3c38ec8efb3c874d2edce6fe 189 SUPERFAMILY SSF81301 15 177 1.93E-47 T 14-10-2018 AMIS_25420 581ac21e3c38ec8efb3c874d2edce6fe 189 Pfam PF04229 GrpB protein 13 172 3.7E-46 T 14-10-2018 IPR007344 GrpB/Dephospho-CoA kinase AMIS_28940 42e94c993df31bfbdda2044593bb0873 330 SUPERFAMILY SSF46689 4 109 7.35E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_28940 42e94c993df31bfbdda2044593bb0873 330 Pfam PF00665 Integrase core domain 131 281 1.6E-40 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AMIS_28940 42e94c993df31bfbdda2044593bb0873 330 SUPERFAMILY SSF53098 183 324 5.69E-35 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily AMIS_28940 42e94c993df31bfbdda2044593bb0873 330 Gene3D G3DSA:3.30.420.10 175 324 4.4E-30 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMIS_28940 42e94c993df31bfbdda2044593bb0873 330 Pfam PF13011 leucine-zipper of insertion element IS481 1 83 1.4E-16 T 14-10-2018 IPR024967 DNA-binding domain, IS481-type AMIS_73350 f3b8c0c469d074ccccde97de9fd150ee 80 ProSitePatterns PS00194 Thioredoxin family active site. 2 20 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AMIS_73350 f3b8c0c469d074ccccde97de9fd150ee 80 SUPERFAMILY SSF52833 1 66 5.99E-16 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMIS_73350 f3b8c0c469d074ccccde97de9fd150ee 80 TIGRFAM TIGR02200 GlrX_actino: glutaredoxin-like protein 2 76 1.1E-36 T 14-10-2018 IPR011915 Glutaredoxin-like protein, actinobacteria AMIS_73350 f3b8c0c469d074ccccde97de9fd150ee 80 Gene3D G3DSA:3.40.30.10 1 79 2.5E-24 T 14-10-2018 AMIS_73350 f3b8c0c469d074ccccde97de9fd150ee 80 Pfam PF00462 Glutaredoxin 3 59 1.1E-13 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AMIS_79230 296f348c642809fcaea64503d66065da 343 Gene3D G3DSA:3.40.50.1980 201 340 8.7E-42 T 14-10-2018 AMIS_79230 296f348c642809fcaea64503d66065da 343 Pfam PF01497 Periplasmic binding protein 91 316 3.4E-34 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain AMIS_79230 296f348c642809fcaea64503d66065da 343 Gene3D G3DSA:3.40.50.1980 77 200 2.2E-34 T 14-10-2018 AMIS_79230 296f348c642809fcaea64503d66065da 343 SUPERFAMILY SSF53807 86 339 2.67E-41 T 14-10-2018 AMIS_19030 30f61c9c9dc4c1b1387159706950a6a6 273 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 12 73 2.1E-8 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMIS_19030 30f61c9c9dc4c1b1387159706950a6a6 273 SUPERFAMILY SSF56645 1 73 2.4E-10 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMIS_19030 30f61c9c9dc4c1b1387159706950a6a6 273 Gene3D G3DSA:1.20.140.10 107 271 6.2E-23 T 14-10-2018 AMIS_19030 30f61c9c9dc4c1b1387159706950a6a6 273 Gene3D G3DSA:1.10.540.10 1 84 5.3E-12 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMIS_19030 30f61c9c9dc4c1b1387159706950a6a6 273 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 112 259 9.7E-12 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMIS_19030 30f61c9c9dc4c1b1387159706950a6a6 273 SUPERFAMILY SSF47203 110 267 4.03E-23 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMIS_46210 ca97c1e4147f08a67a60f28883baa480 537 Gene3D G3DSA:1.10.3720.10 57 251 4.1E-19 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_46210 ca97c1e4147f08a67a60f28883baa480 537 ProSitePatterns PS00211 ABC transporters family signature. 419 433 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_46210 ca97c1e4147f08a67a60f28883baa480 537 SUPERFAMILY SSF161098 59 240 1.31E-22 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_46210 ca97c1e4147f08a67a60f28883baa480 537 Gene3D G3DSA:3.40.50.300 278 525 2.7E-57 T 14-10-2018 AMIS_46210 ca97c1e4147f08a67a60f28883baa480 537 Pfam PF00005 ABC transporter 307 447 3.3E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_46210 ca97c1e4147f08a67a60f28883baa480 537 SUPERFAMILY SSF52540 289 499 6.59E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_46210 ca97c1e4147f08a67a60f28883baa480 537 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 244 6.4E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_46210 ca97c1e4147f08a67a60f28883baa480 537 SMART SM00382 316 511 2.4E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_38960 cc364c1e32169af94d76832436e6fce6 163 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 13 109 1.3E-16 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain AMIS_38960 cc364c1e32169af94d76832436e6fce6 163 SUPERFAMILY SSF53927 9 115 9.54E-30 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AMIS_38960 cc364c1e32169af94d76832436e6fce6 163 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 62 98 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AMIS_38960 cc364c1e32169af94d76832436e6fce6 163 Gene3D G3DSA:3.40.140.10 12 134 6.3E-30 T 14-10-2018 AMIS_29040 e76aecb3bee4a0e223428593a7d018ff 217 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 30 200 8.8E-19 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain AMIS_29040 e76aecb3bee4a0e223428593a7d018ff 217 SUPERFAMILY SSF52266 25 212 1.32E-35 T 14-10-2018 AMIS_29040 e76aecb3bee4a0e223428593a7d018ff 217 Gene3D G3DSA:3.40.50.1110 25 214 1.8E-26 T 14-10-2018 IPR036514 SGNH hydrolase superfamily AMIS_29490 38c8260b166ff804ad3901cf7e068ef8 332 SMART SM00354 8 80 6.8E-15 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_29490 38c8260b166ff804ad3901cf7e068ef8 332 Gene3D G3DSA:3.40.50.2300 160 288 1.1E-30 T 14-10-2018 AMIS_29490 38c8260b166ff804ad3901cf7e068ef8 332 Gene3D G3DSA:1.10.260.40 1 67 9.5E-21 T 14-10-2018 AMIS_29490 38c8260b166ff804ad3901cf7e068ef8 332 Gene3D G3DSA:3.40.50.2300 88 307 1.1E-30 T 14-10-2018 AMIS_29490 38c8260b166ff804ad3901cf7e068ef8 332 SUPERFAMILY SSF47413 7 68 6.26E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_29490 38c8260b166ff804ad3901cf7e068ef8 332 SUPERFAMILY SSF53822 68 327 1.12E-33 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_29490 38c8260b166ff804ad3901cf7e068ef8 332 Pfam PF13377 Periplasmic binding protein-like domain 168 327 1.4E-33 T 14-10-2018 AMIS_29490 38c8260b166ff804ad3901cf7e068ef8 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 12 56 4.0E-11 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_18130 c141e29d93da06e5516797e572b62aae 416 Pfam PF06738 Putative threonine/serine exporter 14 252 9.7E-38 T 14-10-2018 IPR010619 Putative threonine/serine exporter AMIS_59120 207a98b956c0375f9603cf713b34e52b 298 Pfam PF03916 Polysulphide reductase, NrfD 23 185 1.6E-14 T 14-10-2018 IPR005614 NrfD family AMIS_59120 207a98b956c0375f9603cf713b34e52b 298 Gene3D G3DSA:1.20.1630.10 12 221 4.2E-17 T 14-10-2018 AMIS_48490 d604562ada1dc2081c53648b47da5f71 421 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 295 310 7.1E-9 T 14-10-2018 AMIS_48490 d604562ada1dc2081c53648b47da5f71 421 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 13 35 7.1E-9 T 14-10-2018 AMIS_48490 d604562ada1dc2081c53648b47da5f71 421 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 310 326 7.1E-9 T 14-10-2018 AMIS_48490 d604562ada1dc2081c53648b47da5f71 421 SUPERFAMILY SSF51905 13 391 6.22E-21 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_48490 d604562ada1dc2081c53648b47da5f71 421 Gene3D G3DSA:3.30.9.40 75 281 1.1E-122 T 14-10-2018 AMIS_48490 d604562ada1dc2081c53648b47da5f71 421 Gene3D G3DSA:3.50.50.60 14 332 1.1E-122 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_41060 9d3eeda828e4199d9fb78e27e7e8417d 214 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 67 1.0E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_41060 9d3eeda828e4199d9fb78e27e7e8417d 214 SUPERFAMILY SSF46689 8 74 1.44E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_41060 9d3eeda828e4199d9fb78e27e7e8417d 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 9.0E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_41060 9d3eeda828e4199d9fb78e27e7e8417d 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 9.0E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_41060 9d3eeda828e4199d9fb78e27e7e8417d 214 Gene3D G3DSA:1.10.357.10 4 214 6.0E-19 T 14-10-2018 AMIS_76240 f523080220d8da63ee014a2013a4ee5c 132 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 85 130 3.5E-8 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AMIS_76240 f523080220d8da63ee014a2013a4ee5c 132 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site AMIS_28450 8ab8937edacc1607db0e94b662e20174 135 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 6 99 4.0E-13 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AMIS_28450 8ab8937edacc1607db0e94b662e20174 135 TIGRFAM TIGR03668 Rv0121_F420: PPOX class probable F420-dependent enzyme, Rv0121 family 7 133 4.9E-50 T 14-10-2018 IPR019967 F420-dependent enzyme, PPOX class, family Rv0121, probable AMIS_28450 8ab8937edacc1607db0e94b662e20174 135 SUPERFAMILY SSF50475 3 132 1.05E-24 T 14-10-2018 AMIS_28450 8ab8937edacc1607db0e94b662e20174 135 Gene3D G3DSA:2.30.110.10 4 134 2.9E-42 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AMIS_63760 4335ba3aa3f045ea07a578290acbd9ce 378 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 86 264 1.3E-9 T 14-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 AMIS_63760 4335ba3aa3f045ea07a578290acbd9ce 378 SUPERFAMILY SSF51621 66 309 1.41E-20 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AMIS_63760 4335ba3aa3f045ea07a578290acbd9ce 378 Gene3D G3DSA:3.20.20.60 69 314 1.3E-21 T 14-10-2018 AMIS_6770 6943beffc8e9982d38c8bbfe3ad14f5e 104 Gene3D G3DSA:2.30.33.40 4 104 1.2E-39 T 14-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 AMIS_6770 6943beffc8e9982d38c8bbfe3ad14f5e 104 Pfam PF00166 Chaperonin 10 Kd subunit 11 102 2.4E-36 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMIS_6770 6943beffc8e9982d38c8bbfe3ad14f5e 104 PRINTS PR00297 10kDa chaperonin signature 33 54 4.4E-32 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMIS_6770 6943beffc8e9982d38c8bbfe3ad14f5e 104 PRINTS PR00297 10kDa chaperonin signature 11 26 4.4E-32 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMIS_6770 6943beffc8e9982d38c8bbfe3ad14f5e 104 PRINTS PR00297 10kDa chaperonin signature 68 80 4.4E-32 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMIS_6770 6943beffc8e9982d38c8bbfe3ad14f5e 104 PRINTS PR00297 10kDa chaperonin signature 89 102 4.4E-32 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMIS_6770 6943beffc8e9982d38c8bbfe3ad14f5e 104 SUPERFAMILY SSF50129 10 103 2.29E-35 T 14-10-2018 IPR011032 GroES-like superfamily AMIS_6770 6943beffc8e9982d38c8bbfe3ad14f5e 104 ProSitePatterns PS00681 Chaperonins cpn10 signature. 11 35 - T 14-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 AMIS_6770 6943beffc8e9982d38c8bbfe3ad14f5e 104 Hamap MF_00580 10 kDa chaperonin [groS]. 10 103 26.395 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMIS_6770 6943beffc8e9982d38c8bbfe3ad14f5e 104 SMART SM00883 10 102 6.5E-56 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMIS_52690 937aca230be672bfa14c2a8ab178442c 398 SUPERFAMILY SSF56112 1 124 2.97E-22 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMIS_52690 937aca230be672bfa14c2a8ab178442c 398 Pfam PF00069 Protein kinase domain 1 115 1.1E-13 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMIS_52690 937aca230be672bfa14c2a8ab178442c 398 Gene3D G3DSA:1.10.510.10 1 130 1.5E-23 T 14-10-2018 AMIS_57450 a05c3692dd18c714e42a1409adc47294 134 Gene3D G3DSA:3.40.50.1010 1 133 5.0E-26 T 14-10-2018 AMIS_57450 a05c3692dd18c714e42a1409adc47294 134 SUPERFAMILY SSF88723 1 132 8.69E-23 T 14-10-2018 IPR029060 PIN-like domain superfamily AMIS_57450 a05c3692dd18c714e42a1409adc47294 134 Pfam PF01850 PIN domain 4 124 5.8E-10 T 14-10-2018 IPR002716 PIN domain AMIS_57450 a05c3692dd18c714e42a1409adc47294 134 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 4 134 11.084 T 14-10-2018 IPR022907 VapC family GO:0004540 AMIS_68000 65c7da987339cc7609f7317d4e478bce 377 Pfam PF00155 Aminotransferase class I and II 33 372 5.8E-50 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMIS_68000 65c7da987339cc7609f7317d4e478bce 377 Gene3D G3DSA:3.90.1150.10 35 360 2.2E-102 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMIS_68000 65c7da987339cc7609f7317d4e478bce 377 Gene3D G3DSA:3.40.640.10 49 278 2.2E-102 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_68000 65c7da987339cc7609f7317d4e478bce 377 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 227 236 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 AMIS_68000 65c7da987339cc7609f7317d4e478bce 377 SUPERFAMILY SSF53383 12 375 3.59E-89 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_76760 411bf4566b4efc393dca6813356f343a 124 Pfam PF02635 DsrE/DsrF-like family 14 113 1.0E-10 T 14-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein AMIS_76760 411bf4566b4efc393dca6813356f343a 124 Gene3D G3DSA:3.40.1260.10 4 121 6.7E-24 T 14-10-2018 IPR027396 DsrEFH-like AMIS_76760 411bf4566b4efc393dca6813356f343a 124 SUPERFAMILY SSF75169 10 116 1.33E-18 T 14-10-2018 IPR027396 DsrEFH-like AMIS_73540 af4590d0af8f801c89694cfa669b209f 356 Pfam PF01546 Peptidase family M20/M25/M40 70 354 1.9E-23 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 AMIS_73540 af4590d0af8f801c89694cfa669b209f 356 SUPERFAMILY SSF53187 13 355 1.52E-41 T 14-10-2018 AMIS_73540 af4590d0af8f801c89694cfa669b209f 356 Gene3D G3DSA:3.30.70.360 170 278 9.3E-97 T 14-10-2018 AMIS_73540 af4590d0af8f801c89694cfa669b209f 356 SUPERFAMILY SSF55031 170 273 1.12E-19 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AMIS_73540 af4590d0af8f801c89694cfa669b209f 356 TIGRFAM TIGR01900 dapE-gram_pos: succinyl-diaminopimelate desuccinylase 12 355 1.7E-153 T 14-10-2018 IPR010174 Succinyl-diaminopimelate desuccinylase, DapE GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 AMIS_73540 af4590d0af8f801c89694cfa669b209f 356 Pfam PF07687 Peptidase dimerisation domain 170 268 1.4E-11 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain AMIS_73540 af4590d0af8f801c89694cfa669b209f 356 Gene3D G3DSA:3.40.630.10 20 344 9.3E-97 T 14-10-2018 AMIS_61020 ce1c24b5a702d4837a41c9eb3f430458 430 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 304 331 5.4E-19 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_61020 ce1c24b5a702d4837a41c9eb3f430458 430 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 9 5.4E-19 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_61020 ce1c24b5a702d4837a41c9eb3f430458 430 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 333 362 5.4E-19 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_61020 ce1c24b5a702d4837a41c9eb3f430458 430 SUPERFAMILY SSF58104 212 428 6.8E-42 T 14-10-2018 AMIS_61020 ce1c24b5a702d4837a41c9eb3f430458 430 Gene3D G3DSA:1.10.287.950 175 430 3.8E-39 T 14-10-2018 AMIS_61020 ce1c24b5a702d4837a41c9eb3f430458 430 SMART SM00283 213 430 3.2E-16 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_61020 ce1c24b5a702d4837a41c9eb3f430458 430 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 268 424 7.6E-31 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_44910 d3cc2ef36e3c327dfb864d8cf9d2e422 222 Gene3D G3DSA:3.40.50.300 6 212 6.8E-44 T 14-10-2018 AMIS_44910 d3cc2ef36e3c327dfb864d8cf9d2e422 222 SUPERFAMILY SSF52540 23 213 9.15E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_76230 0a935f5eea08b81f63655bcc8c4ee387 115 PIRSF PIRSF002889 2 115 1.5E-17 T 14-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 AMIS_76230 0a935f5eea08b81f63655bcc8c4ee387 115 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site AMIS_76230 0a935f5eea08b81f63655bcc8c4ee387 115 Pfam PF00460 Flagella basal body rod protein 10 37 3.5E-6 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AMIS_64080 84395359814e7d5ee90379d2d1fbd9ac 517 SUPERFAMILY SSF53474 101 480 4.05E-27 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_64080 84395359814e7d5ee90379d2d1fbd9ac 517 Pfam PF00561 alpha/beta hydrolase fold 112 480 2.3E-34 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_49530 d9757b70adead1be16235554a85f5d09 291 Pfam PF14015 Protein of unknown function (DUF4231) 159 256 1.5E-7 T 14-10-2018 IPR025325 Protein of unknown function DUF4231 AMIS_44180 75578898ebf5d414bbaf168025742ed9 275 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 267 3.9E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_44180 75578898ebf5d414bbaf168025742ed9 275 Gene3D G3DSA:1.10.3720.10 1 266 2.9E-63 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_44180 75578898ebf5d414bbaf168025742ed9 275 SUPERFAMILY SSF161098 3 275 8.5E-71 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_50630 78334009ad19554f5bad23337802ba31 377 SUPERFAMILY SSF53756 1 377 5.42E-61 T 14-10-2018 AMIS_50630 78334009ad19554f5bad23337802ba31 377 Gene3D G3DSA:3.40.50.2000 1 374 5.1E-103 T 14-10-2018 AMIS_50630 78334009ad19554f5bad23337802ba31 377 Pfam PF06722 Protein of unknown function (DUF1205) 171 258 2.7E-13 T 14-10-2018 IPR010610 Domain of unknown function DUF1205 AMIS_50630 78334009ad19554f5bad23337802ba31 377 Gene3D G3DSA:3.40.50.2000 201 361 5.1E-103 T 14-10-2018 AMIS_3110 0e5dace4854f2fa25151d79d4d0b1968 662 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 10 655 50.399 T 14-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 AMIS_3110 0e5dace4854f2fa25151d79d4d0b1968 662 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 30 82 1.6E-20 T 14-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 AMIS_3110 0e5dace4854f2fa25151d79d4d0b1968 662 Pfam PF13193 AMP-binding enzyme C-terminal domain 539 621 4.8E-27 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AMIS_3110 0e5dace4854f2fa25151d79d4d0b1968 662 ProSitePatterns PS00455 Putative AMP-binding domain signature. 259 270 - T 14-10-2018 IPR020845 AMP-binding, conserved site AMIS_3110 0e5dace4854f2fa25151d79d4d0b1968 662 Gene3D G3DSA:3.30.300.30 526 658 4.2E-30 T 14-10-2018 AMIS_3110 0e5dace4854f2fa25151d79d4d0b1968 662 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 25 652 2.6E-289 T 14-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 AMIS_3110 0e5dace4854f2fa25151d79d4d0b1968 662 Pfam PF00501 AMP-binding enzyme 89 530 3.8E-91 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMIS_3110 0e5dace4854f2fa25151d79d4d0b1968 662 SUPERFAMILY SSF56801 32 651 1.01E-169 T 14-10-2018 AMIS_3110 0e5dace4854f2fa25151d79d4d0b1968 662 Gene3D G3DSA:3.40.50.12780 54 523 5.5E-103 T 14-10-2018 AMIS_3220 6611b487199f6c1552e11f21e4886658 197 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 79 126 6.9E-5 T 14-10-2018 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal AMIS_3220 6611b487199f6c1552e11f21e4886658 197 TIGRFAM TIGR03816 tadE_like_DECH: helicase/secretion neighborhood TadE-like protein 77 185 2.7E-22 T 14-10-2018 IPR021202 Apoptosis inhibitor Rv3654c-like AMIS_48960 ddfb089f0687966bb293f34d6eb5b56c 573 SUPERFAMILY SSF56112 9 247 4.66E-63 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMIS_48960 ddfb089f0687966bb293f34d6eb5b56c 573 SMART SM00220 11 245 5.2E-49 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMIS_48960 ddfb089f0687966bb293f34d6eb5b56c 573 Gene3D G3DSA:3.30.200.20 7 85 4.3E-15 T 14-10-2018 AMIS_48960 ddfb089f0687966bb293f34d6eb5b56c 573 Gene3D G3DSA:1.10.510.10 86 263 3.9E-39 T 14-10-2018 AMIS_48960 ddfb089f0687966bb293f34d6eb5b56c 573 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 131 143 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 AMIS_48960 ddfb089f0687966bb293f34d6eb5b56c 573 Pfam PF00069 Protein kinase domain 13 211 4.9E-42 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMIS_44460 0cc41ccd015a2f49293a99000c8813ce 301 Gene3D G3DSA:3.30.110.170 99 296 2.8E-52 T 14-10-2018 AMIS_44460 0cc41ccd015a2f49293a99000c8813ce 301 Gene3D G3DSA:3.30.70.2970 109 214 2.8E-52 T 14-10-2018 AMIS_44460 0cc41ccd015a2f49293a99000c8813ce 301 Pfam PF04402 Protein of unknown function (DUF541) 99 296 2.3E-41 T 14-10-2018 IPR007497 Protein of unknown function DUF541 AMIS_80750 3c17da8971adda81cb244da8028072fe 188 Pfam PF07681 DoxX 6 96 3.6E-13 T 14-10-2018 IPR032808 DoxX family AMIS_45020 3522b51a8fd40a669e7f15a99c5165d1 422 SUPERFAMILY SSF53756 7 417 1.88E-82 T 14-10-2018 AMIS_45020 3522b51a8fd40a669e7f15a99c5165d1 422 Pfam PF13439 Glycosyltransferase Family 4 20 221 5.8E-25 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AMIS_45020 3522b51a8fd40a669e7f15a99c5165d1 422 Gene3D G3DSA:3.40.50.2000 218 396 1.3E-83 T 14-10-2018 AMIS_45020 3522b51a8fd40a669e7f15a99c5165d1 422 Gene3D G3DSA:3.40.50.2000 10 413 1.3E-83 T 14-10-2018 AMIS_45020 3522b51a8fd40a669e7f15a99c5165d1 422 Pfam PF00534 Glycosyl transferases group 1 232 395 9.9E-32 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 AMIS_67850 8c7973fc6c8f0931a3c47c6ce94dae77 300 SUPERFAMILY SSF48150 106 280 4.89E-29 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AMIS_67850 8c7973fc6c8f0931a3c47c6ce94dae77 300 Gene3D G3DSA:1.10.340.30 117 228 1.1E-19 T 14-10-2018 AMIS_37890 7478a29e496a901140ca4009afc3d967 282 SUPERFAMILY SSF56266 11 278 7.06E-45 T 14-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 AMIS_37890 7478a29e496a901140ca4009afc3d967 282 Gene3D G3DSA:3.60.70.12 9 281 9.2E-74 T 14-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 AMIS_37890 7478a29e496a901140ca4009afc3d967 282 Pfam PF03576 Peptidase family S58 17 278 1.9E-38 T 14-10-2018 IPR005321 Peptidase S58, DmpA AMIS_47480 b86e2ad31b42f2620732925014af3170 177 SUPERFAMILY SSF55729 7 153 7.48E-39 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_47480 b86e2ad31b42f2620732925014af3170 177 Gene3D G3DSA:3.40.630.30 4 167 1.5E-44 T 14-10-2018 AMIS_47480 b86e2ad31b42f2620732925014af3170 177 Pfam PF13302 Acetyltransferase (GNAT) domain 10 148 1.2E-32 T 14-10-2018 IPR000182 GNAT domain AMIS_34880 a615ba586d70a85fac5ef11d8c804a67 184 SUPERFAMILY SSF54427 27 134 1.25E-11 T 14-10-2018 IPR032710 NTF2-like domain superfamily AMIS_34880 a615ba586d70a85fac5ef11d8c804a67 184 Gene3D G3DSA:3.10.450.50 25 150 1.9E-27 T 14-10-2018 AMIS_51590 f41a39d82a3d7f8d36349d27a42c863a 463 SUPERFAMILY SSF51905 8 311 2.69E-39 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_51590 f41a39d82a3d7f8d36349d27a42c863a 463 Gene3D G3DSA:3.50.50.60 35 400 1.5E-58 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_51590 f41a39d82a3d7f8d36349d27a42c863a 463 Gene3D G3DSA:3.30.9.10 129 360 1.5E-58 T 14-10-2018 AMIS_51590 f41a39d82a3d7f8d36349d27a42c863a 463 Pfam PF01266 FAD dependent oxidoreductase 35 390 5.3E-49 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AMIS_28230 c74119fed3de8a915ce5c205f730d650 77 Pfam PF00830 Ribosomal L28 family 4 60 3.5E-23 T 14-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_28230 c74119fed3de8a915ce5c205f730d650 77 Gene3D G3DSA:2.30.170.40 2 77 1.9E-26 T 14-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_28230 c74119fed3de8a915ce5c205f730d650 77 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 70 20.824 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_28230 c74119fed3de8a915ce5c205f730d650 77 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 57 8.2E-23 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_28230 c74119fed3de8a915ce5c205f730d650 77 SUPERFAMILY SSF143800 1 76 1.39E-25 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_71020 9009073eea17e6bdf5959febfd1e2308 268 Pfam PF13460 NAD(P)H-binding 7 167 1.6E-13 T 14-10-2018 IPR016040 NAD(P)-binding domain AMIS_71020 9009073eea17e6bdf5959febfd1e2308 268 Gene3D G3DSA:3.90.25.10 121 251 4.1E-56 T 14-10-2018 AMIS_71020 9009073eea17e6bdf5959febfd1e2308 268 SUPERFAMILY SSF51735 2 217 1.65E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_71020 9009073eea17e6bdf5959febfd1e2308 268 Gene3D G3DSA:3.40.50.720 4 249 4.1E-56 T 14-10-2018 AMIS_61700 4ae5c0d4ce7e348c9852beb6db2f4a03 372 SMART SM00327 208 364 8.1E-4 T 14-10-2018 IPR002035 von Willebrand factor, type A AMIS_61700 4ae5c0d4ce7e348c9852beb6db2f4a03 372 SUPERFAMILY SSF53300 207 338 1.43E-17 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMIS_61700 4ae5c0d4ce7e348c9852beb6db2f4a03 372 Gene3D G3DSA:3.40.50.410 207 369 4.4E-9 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMIS_61700 4ae5c0d4ce7e348c9852beb6db2f4a03 372 Pfam PF05762 VWA domain containing CoxE-like protein 146 364 4.9E-51 T 14-10-2018 IPR008912 Uncharacterised protein family CoxE-like AMIS_3080 e165807b185729c994939e58f9335320 304 Pfam PF00561 alpha/beta hydrolase fold 33 285 4.3E-20 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_3080 e165807b185729c994939e58f9335320 304 PRINTS PR00412 Epoxide hydrolase signature 277 299 1.3E-19 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_3080 e165807b185729c994939e58f9335320 304 PRINTS PR00412 Epoxide hydrolase signature 103 116 1.3E-19 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_3080 e165807b185729c994939e58f9335320 304 PRINTS PR00412 Epoxide hydrolase signature 59 74 1.3E-19 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_3080 e165807b185729c994939e58f9335320 304 PRINTS PR00412 Epoxide hydrolase signature 243 259 1.3E-19 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_3080 e165807b185729c994939e58f9335320 304 PRINTS PR00412 Epoxide hydrolase signature 39 57 1.3E-19 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_3080 e165807b185729c994939e58f9335320 304 PRINTS PR00412 Epoxide hydrolase signature 117 130 1.3E-19 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_3080 e165807b185729c994939e58f9335320 304 Gene3D G3DSA:3.40.50.1820 12 301 6.3E-66 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_3080 e165807b185729c994939e58f9335320 304 SUPERFAMILY SSF53474 11 301 5.66E-60 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_3080 e165807b185729c994939e58f9335320 304 PRINTS PR00111 Alpha/beta hydrolase fold signature 117 130 4.7E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_3080 e165807b185729c994939e58f9335320 304 PRINTS PR00111 Alpha/beta hydrolase fold signature 59 74 4.7E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_3080 e165807b185729c994939e58f9335320 304 PRINTS PR00111 Alpha/beta hydrolase fold signature 103 116 4.7E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_1470 fa755cbecb510eb850037ace353a474c 355 Pfam PF00348 Polyprenyl synthetase 56 291 8.9E-51 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 AMIS_1470 fa755cbecb510eb850037ace353a474c 355 Gene3D G3DSA:1.10.600.10 7 354 5.8E-104 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily AMIS_1470 fa755cbecb510eb850037ace353a474c 355 SUPERFAMILY SSF48576 30 353 1.78E-74 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily AMIS_1470 fa755cbecb510eb850037ace353a474c 355 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 105 119 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site AMIS_1470 fa755cbecb510eb850037ace353a474c 355 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 242 254 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site AMIS_45090 686cadaf9da636a6be950a8146bebb83 337 Pfam PF04087 Domain of unknown function (DUF389) 67 205 2.0E-29 T 14-10-2018 IPR005240 Protein of unknown function DUF389 AMIS_17030 06550237ce97875e4393a8573bc19419 434 SUPERFAMILY SSF55874 266 385 2.48E-13 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_17030 06550237ce97875e4393a8573bc19419 434 Gene3D G3DSA:3.30.565.10 258 386 1.6E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_17030 06550237ce97875e4393a8573bc19419 434 Pfam PF07730 Histidine kinase 184 249 8.9E-19 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMIS_39380 78c5f1cf889b265a396d118a24f4eb19 362 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 4 282 1.3E-38 T 14-10-2018 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AMIS_39380 78c5f1cf889b265a396d118a24f4eb19 362 Gene3D G3DSA:3.30.590.20 1 360 1.3E-101 T 14-10-2018 AMIS_39380 78c5f1cf889b265a396d118a24f4eb19 362 SUPERFAMILY SSF55931 2 356 1.18E-78 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AMIS_39380 78c5f1cf889b265a396d118a24f4eb19 362 TIGRFAM TIGR02050 gshA_cyan_rel: carboxylate-amine ligase, YbdK family 3 287 1.7E-70 T 14-10-2018 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AMIS_39380 78c5f1cf889b265a396d118a24f4eb19 362 Hamap MF_01609 Glutamate--cysteine ligase [gshA]. 1 362 69.213 T 14-10-2018 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AMIS_77430 bc4dafdde289a491968481453def13a6 360 Hamap MF_01513 Putative phenylalanine aminotransferase [pat]. 5 359 46.145 T 14-10-2018 IPR024892 Putative phenylalanine aminotransferase AMIS_77430 bc4dafdde289a491968481453def13a6 360 Gene3D G3DSA:3.40.640.10 45 270 4.8E-124 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_77430 bc4dafdde289a491968481453def13a6 360 SUPERFAMILY SSF53383 15 353 9.52E-83 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_77430 bc4dafdde289a491968481453def13a6 360 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 222 231 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 AMIS_77430 bc4dafdde289a491968481453def13a6 360 Gene3D G3DSA:3.90.1150.10 10 351 4.8E-124 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMIS_77430 bc4dafdde289a491968481453def13a6 360 Pfam PF00155 Aminotransferase class I and II 33 351 1.0E-55 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMIS_77430 bc4dafdde289a491968481453def13a6 360 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 358 52.932 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 AMIS_77430 bc4dafdde289a491968481453def13a6 360 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 6 354 1.5E-94 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 AMIS_71950 a8b13d5aa9869a354e7c8e7dcd383987 273 PRINTS PR00125 ATP synthase delta subunit signature 231 246 1.6E-7 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMIS_71950 a8b13d5aa9869a354e7c8e7dcd383987 273 PRINTS PR00125 ATP synthase delta subunit signature 246 264 1.6E-7 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMIS_71950 a8b13d5aa9869a354e7c8e7dcd383987 273 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 111 267 2.3E-16 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMIS_71950 a8b13d5aa9869a354e7c8e7dcd383987 273 Pfam PF00213 ATP synthase delta (OSCP) subunit 109 269 7.8E-29 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMIS_71950 a8b13d5aa9869a354e7c8e7dcd383987 273 Pfam PF00213 ATP synthase delta (OSCP) subunit 25 88 8.5E-5 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMIS_71950 a8b13d5aa9869a354e7c8e7dcd383987 273 Hamap MF_01416 ATP synthase subunit delta [atpD]. 97 273 13.168 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMIS_62010 956fa638354c2f03bcb2090110515d85 437 Pfam PF01757 Acyltransferase family 31 351 8.2E-23 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 AMIS_39370 b458f2172bf8884f71fb35b5f8c65f19 331 Pfam PF03595 Voltage-dependent anion channel 3 291 5.8E-29 T 14-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 AMIS_39370 b458f2172bf8884f71fb35b5f8c65f19 331 Gene3D G3DSA:1.50.10.150 1 300 1.2E-68 T 14-10-2018 IPR038665 Voltage-dependent anion channel superfamily AMIS_71260 4110dd0010666fa61aff1c6da2d1ade4 283 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 267 1.3E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_71260 4110dd0010666fa61aff1c6da2d1ade4 283 Gene3D G3DSA:1.10.3720.10 6 275 2.8E-51 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_71260 4110dd0010666fa61aff1c6da2d1ade4 283 SUPERFAMILY SSF161098 12 283 1.57E-54 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_72850 822a2562c94411f3253b1a486519ff16 102 Pfam PF00717 Peptidase S24-like 12 71 1.3E-12 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AMIS_72850 822a2562c94411f3253b1a486519ff16 102 Gene3D G3DSA:2.10.109.10 7 99 3.4E-10 T 14-10-2018 AMIS_72850 822a2562c94411f3253b1a486519ff16 102 SUPERFAMILY SSF51306 9 98 2.88E-17 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily AMIS_15690 16c66a26ca2e6f6c56fc54c7328f6f76 73 Gene3D G3DSA:3.50.50.60 1 68 1.5E-10 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_15690 16c66a26ca2e6f6c56fc54c7328f6f76 73 SUPERFAMILY SSF51905 4 57 7.51E-10 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_15690 16c66a26ca2e6f6c56fc54c7328f6f76 73 Pfam PF13450 NAD(P)-binding Rossmann-like domain 6 36 2.9E-6 T 14-10-2018 AMIS_54990 aee16afdccca341c16a28b57de6db8be 336 Gene3D G3DSA:3.40.50.2300 66 313 4.3E-64 T 14-10-2018 AMIS_54990 aee16afdccca341c16a28b57de6db8be 336 Pfam PF13377 Periplasmic binding protein-like domain 182 335 1.6E-33 T 14-10-2018 AMIS_54990 aee16afdccca341c16a28b57de6db8be 336 Gene3D G3DSA:3.40.50.2300 174 296 4.3E-64 T 14-10-2018 AMIS_54990 aee16afdccca341c16a28b57de6db8be 336 ProSitePatterns PS00356 LacI-type HTH domain signature. 14 32 - T 14-10-2018 AMIS_54990 aee16afdccca341c16a28b57de6db8be 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 13 58 1.8E-13 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_54990 aee16afdccca341c16a28b57de6db8be 336 SMART SM00354 11 81 3.2E-22 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_54990 aee16afdccca341c16a28b57de6db8be 336 SUPERFAMILY SSF47413 11 69 1.15E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_54990 aee16afdccca341c16a28b57de6db8be 336 SUPERFAMILY SSF53822 84 335 8.52E-63 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_54990 aee16afdccca341c16a28b57de6db8be 336 Gene3D G3DSA:1.10.260.40 4 65 3.9E-20 T 14-10-2018 AMIS_34980 86a69396cee44f94a1d2f17ab8402da7 195 ProSitePatterns PS01081 TetR-type HTH domain signature. 32 63 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMIS_34980 86a69396cee44f94a1d2f17ab8402da7 195 Gene3D G3DSA:1.10.357.10 5 192 4.4E-38 T 14-10-2018 AMIS_34980 86a69396cee44f94a1d2f17ab8402da7 195 SUPERFAMILY SSF46689 7 79 4.51E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_34980 86a69396cee44f94a1d2f17ab8402da7 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 1.6E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_34980 86a69396cee44f94a1d2f17ab8402da7 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 1.6E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_34980 86a69396cee44f94a1d2f17ab8402da7 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 63 7.0E-17 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_26210 17ba22644d0e508b5886c554cc8701d4 389 SMART SM00387 294 387 7.2E-5 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_26210 17ba22644d0e508b5886c554cc8701d4 389 Gene3D G3DSA:3.30.565.10 257 386 6.1E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_26210 17ba22644d0e508b5886c554cc8701d4 389 Pfam PF07730 Histidine kinase 184 248 9.3E-18 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMIS_26210 17ba22644d0e508b5886c554cc8701d4 389 SUPERFAMILY SSF55874 269 384 7.89E-20 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_63320 63ead940aad467e981721a7676a64bb8 220 Gene3D G3DSA:3.60.15.10 1 218 2.3E-50 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMIS_63320 63ead940aad467e981721a7676a64bb8 220 SMART SM00849 12 202 3.1E-31 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMIS_63320 63ead940aad467e981721a7676a64bb8 220 SUPERFAMILY SSF56281 1 210 3.14E-47 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMIS_63320 63ead940aad467e981721a7676a64bb8 220 Pfam PF00753 Metallo-beta-lactamase superfamily 10 202 9.5E-29 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMIS_1110 28d0e3d52fc3e662bc8478ea417ae940 429 SUPERFAMILY SSF52540 2 426 1.59E-168 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_1110 28d0e3d52fc3e662bc8478ea417ae940 429 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 429 193.676 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AMIS_1110 28d0e3d52fc3e662bc8478ea417ae940 429 SMART SM00788 3 422 4.2E-272 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AMIS_1110 28d0e3d52fc3e662bc8478ea417ae940 429 Gene3D G3DSA:3.40.440.10 5 258 3.5E-95 T 14-10-2018 AMIS_1110 28d0e3d52fc3e662bc8478ea417ae940 429 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 131 142 - T 14-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AMIS_1110 28d0e3d52fc3e662bc8478ea417ae940 429 Gene3D G3DSA:3.90.170.10 265 429 2.8E-67 T 14-10-2018 AMIS_1110 28d0e3d52fc3e662bc8478ea417ae940 429 Gene3D G3DSA:1.10.300.10 100 199 3.5E-95 T 14-10-2018 AMIS_1110 28d0e3d52fc3e662bc8478ea417ae940 429 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 14-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AMIS_1110 28d0e3d52fc3e662bc8478ea417ae940 429 Pfam PF00709 Adenylosuccinate synthetase 4 421 8.0E-176 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AMIS_1110 28d0e3d52fc3e662bc8478ea417ae940 429 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 5 425 1.8E-162 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AMIS_64050 0f9ff071b2455ab7b69ab3414218fdb3 205 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 1 205 28.095 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 AMIS_64050 0f9ff071b2455ab7b69ab3414218fdb3 205 Gene3D G3DSA:3.40.50.150 2 205 7.4E-63 T 14-10-2018 AMIS_64050 0f9ff071b2455ab7b69ab3414218fdb3 205 Pfam PF02390 Putative methyltransferase 38 199 2.5E-48 T 14-10-2018 AMIS_64050 0f9ff071b2455ab7b69ab3414218fdb3 205 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 29 188 1.6E-43 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 AMIS_64050 0f9ff071b2455ab7b69ab3414218fdb3 205 SUPERFAMILY SSF53335 28 203 2.81E-33 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_50370 766291e486eb421a2db85bd2ca8a3eb6 246 SUPERFAMILY SSF52096 13 236 5.57E-42 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMIS_50370 766291e486eb421a2db85bd2ca8a3eb6 246 Gene3D G3DSA:3.90.226.10 7 241 8.1E-46 T 14-10-2018 AMIS_50370 766291e486eb421a2db85bd2ca8a3eb6 246 Pfam PF00378 Enoyl-CoA hydratase/isomerase 16 206 7.0E-27 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AMIS_63020 1589a334024786a93503635a7cbe3a65 340 ProSitePatterns PS00485 Adenosine and AMP deaminase signature. 276 282 - T 14-10-2018 IPR006650 Adenosine/AMP deaminase active site GO:0009168|GO:0019239 Reactome: R-HSA-74217 AMIS_63020 1589a334024786a93503635a7cbe3a65 340 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 11 332 7.0E-84 T 14-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 AMIS_63020 1589a334024786a93503635a7cbe3a65 340 Pfam PF00962 Adenosine/AMP deaminase 11 330 1.7E-84 T 14-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 AMIS_63020 1589a334024786a93503635a7cbe3a65 340 SUPERFAMILY SSF51556 7 338 5.38E-81 T 14-10-2018 IPR032466 Metal-dependent hydrolase AMIS_63020 1589a334024786a93503635a7cbe3a65 340 Gene3D G3DSA:3.20.20.140 2 339 1.3E-97 T 14-10-2018 AMIS_54890 5491865c6635143e4ebdcfc84d6b56a5 280 SUPERFAMILY SSF161098 68 256 7.59E-19 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_54890 5491865c6635143e4ebdcfc84d6b56a5 280 Gene3D G3DSA:1.10.3720.10 65 266 2.2E-19 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_54890 5491865c6635143e4ebdcfc84d6b56a5 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 257 8.1E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_28340 39aeb95c94ae1d0c0a054c350b92c2a5 482 Pfam PF14200 Ricin-type beta-trefoil lectin domain-like 117 174 3.0E-12 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_28340 39aeb95c94ae1d0c0a054c350b92c2a5 482 Pfam PF14200 Ricin-type beta-trefoil lectin domain-like 34 111 6.6E-21 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_28340 39aeb95c94ae1d0c0a054c350b92c2a5 482 Gene3D G3DSA:2.115.10.20 177 482 1.0E-144 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMIS_28340 39aeb95c94ae1d0c0a054c350b92c2a5 482 SMART SM00458 35 170 6.1E-6 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_28340 39aeb95c94ae1d0c0a054c350b92c2a5 482 SUPERFAMILY SSF75005 202 469 4.36E-33 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMIS_28340 39aeb95c94ae1d0c0a054c350b92c2a5 482 Gene3D G3DSA:2.80.10.50 77 126 4.5E-17 T 14-10-2018 AMIS_28340 39aeb95c94ae1d0c0a054c350b92c2a5 482 Gene3D G3DSA:2.80.10.50 19 76 6.6E-12 T 14-10-2018 AMIS_28340 39aeb95c94ae1d0c0a054c350b92c2a5 482 Gene3D G3DSA:2.80.10.50 127 176 1.9E-12 T 14-10-2018 AMIS_28340 39aeb95c94ae1d0c0a054c350b92c2a5 482 SUPERFAMILY SSF50370 33 170 1.39E-44 T 14-10-2018 IPR035992 Ricin B-like lectins AMIS_28340 39aeb95c94ae1d0c0a054c350b92c2a5 482 Pfam PF03664 Glycosyl hydrolase family 62 182 452 2.8E-158 T 14-10-2018 IPR005193 Glycoside hydrolase, family 62, arabinosidase GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 AMIS_75460 7559ffbb00c0da737eaad602bd8a3003 210 Pfam PF00588 SpoU rRNA Methylase family 62 198 5.3E-23 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AMIS_75460 7559ffbb00c0da737eaad602bd8a3003 210 SUPERFAMILY SSF75217 42 205 1.11E-37 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases AMIS_75460 7559ffbb00c0da737eaad602bd8a3003 210 Gene3D G3DSA:3.40.1280.10 46 208 1.5E-31 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMIS_69870 4e7083cd4ca567be7ff9526f99bed290 231 Gene3D G3DSA:3.40.50.300 1 204 1.1E-22 T 14-10-2018 AMIS_69870 4e7083cd4ca567be7ff9526f99bed290 231 SMART SM00382 28 190 2.4E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_69870 4e7083cd4ca567be7ff9526f99bed290 231 Pfam PF00005 ABC transporter 20 66 9.8E-7 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_69870 4e7083cd4ca567be7ff9526f99bed290 231 SUPERFAMILY SSF52540 3 195 5.42E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_49080 1ece352a9e8bd0b973976458c45c42bb 567 Pfam PF00664 ABC transporter transmembrane region 1 267 2.9E-30 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AMIS_49080 1ece352a9e8bd0b973976458c45c42bb 567 SMART SM00382 349 533 2.6E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_49080 1ece352a9e8bd0b973976458c45c42bb 567 SUPERFAMILY SSF90123 1 293 1.57E-51 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMIS_49080 1ece352a9e8bd0b973976458c45c42bb 567 ProSitePatterns PS00211 ABC transporters family signature. 459 473 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_49080 1ece352a9e8bd0b973976458c45c42bb 567 Gene3D G3DSA:3.40.50.300 315 564 7.8E-77 T 14-10-2018 AMIS_49080 1ece352a9e8bd0b973976458c45c42bb 567 Pfam PF00005 ABC transporter 341 487 1.1E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_49080 1ece352a9e8bd0b973976458c45c42bb 567 Gene3D G3DSA:1.20.1560.10 1 298 2.1E-54 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMIS_49080 1ece352a9e8bd0b973976458c45c42bb 567 SUPERFAMILY SSF52540 316 555 1.15E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_73750 467128714b010c58af477f181d7c13a5 631 PIRSF PIRSF000171 1 608 8.3E-35 T 14-10-2018 AMIS_73750 467128714b010c58af477f181d7c13a5 631 Gene3D G3DSA:3.90.700.10 254 396 1.1E-145 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMIS_73750 467128714b010c58af477f181d7c13a5 631 Pfam PF00890 FAD binding domain 11 432 9.6E-92 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMIS_73750 467128714b010c58af477f181d7c13a5 631 SUPERFAMILY SSF46977 479 627 1.57E-39 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMIS_73750 467128714b010c58af477f181d7c13a5 631 SUPERFAMILY SSF51905 5 474 4.66E-70 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_73750 467128714b010c58af477f181d7c13a5 631 Gene3D G3DSA:3.50.50.60 11 444 1.1E-145 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_73750 467128714b010c58af477f181d7c13a5 631 Gene3D G3DSA:1.20.58.100 463 573 5.7E-29 T 14-10-2018 AMIS_73750 467128714b010c58af477f181d7c13a5 631 SUPERFAMILY SSF56425 244 390 2.49E-33 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMIS_73750 467128714b010c58af477f181d7c13a5 631 Pfam PF02910 Fumarate reductase flavoprotein C-term 488 601 4.0E-23 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMIS_63710 0a8455b1ec33ebdfcda35f125a33f492 372 SUPERFAMILY SSF56112 122 329 7.42E-21 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMIS_63710 0a8455b1ec33ebdfcda35f125a33f492 372 Gene3D G3DSA:3.90.1200.10 222 355 3.3E-10 T 14-10-2018 AMIS_63710 0a8455b1ec33ebdfcda35f125a33f492 372 Pfam PF01636 Phosphotransferase enzyme family 172 319 2.4E-11 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase AMIS_16960 5c0ab84f6f47a159b373edd62c75c31b 478 Pfam PF01547 Bacterial extracellular solute-binding protein 82 381 8.8E-22 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein AMIS_16960 5c0ab84f6f47a159b373edd62c75c31b 478 Gene3D G3DSA:3.40.190.10 96 418 3.5E-53 T 14-10-2018 AMIS_16960 5c0ab84f6f47a159b373edd62c75c31b 478 TIGRFAM TIGR03851 chitin_NgcE: carbohydrate ABC transporter, N-acetylglucosamine/diacetylchitobiose-binding protein 27 475 8.6E-172 T 14-10-2018 IPR022386 Carbohydrate ABC transporter, N-acetylglucosamine/diacetylchitobiose-binding protein AMIS_16960 5c0ab84f6f47a159b373edd62c75c31b 478 SUPERFAMILY SSF53850 34 467 1.09E-48 T 14-10-2018 AMIS_16960 5c0ab84f6f47a159b373edd62c75c31b 478 Gene3D G3DSA:3.40.190.10 187 349 3.5E-53 T 14-10-2018 AMIS_50860 6d396ac2151d80204f676ebe3e71743a 294 Gene3D G3DSA:3.40.50.1980 153 278 1.4E-21 T 14-10-2018 AMIS_50860 6d396ac2151d80204f676ebe3e71743a 294 Pfam PF01497 Periplasmic binding protein 4 234 6.7E-16 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain AMIS_50860 6d396ac2151d80204f676ebe3e71743a 294 Gene3D G3DSA:3.40.50.1980 1 152 2.9E-25 T 14-10-2018 AMIS_50860 6d396ac2151d80204f676ebe3e71743a 294 SUPERFAMILY SSF53807 2 279 5.1E-39 T 14-10-2018 AMIS_6270 154768ecbfd44a370cb717ec3662b6f1 73 SUPERFAMILY SSF50249 4 72 5.57E-27 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMIS_6270 154768ecbfd44a370cb717ec3662b6f1 73 Pfam PF01176 Translation initiation factor 1A / IF-1 8 71 2.7E-29 T 14-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 AMIS_6270 154768ecbfd44a370cb717ec3662b6f1 73 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 4 72 3.2E-37 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 AMIS_6270 154768ecbfd44a370cb717ec3662b6f1 73 Gene3D G3DSA:2.40.50.140 1 73 5.8E-38 T 14-10-2018 AMIS_6270 154768ecbfd44a370cb717ec3662b6f1 73 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 2 73 26.168 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 AMIS_25130 c88723d39c4df7f4937228c566e8aba1 253 Gene3D G3DSA:3.40.50.1820 14 251 2.8E-46 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_25130 c88723d39c4df7f4937228c566e8aba1 253 SUPERFAMILY SSF53474 9 247 1.07E-31 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_25130 c88723d39c4df7f4937228c566e8aba1 253 Pfam PF12697 Alpha/beta hydrolase family 24 243 9.5E-16 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_23960 3c28fa4a6391331948cc04b065fa6b73 498 SUPERFAMILY SSF51445 59 341 3.03E-36 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_23960 3c28fa4a6391331948cc04b065fa6b73 498 Gene3D G3DSA:3.20.20.80 56 339 2.5E-32 T 14-10-2018 AMIS_23960 3c28fa4a6391331948cc04b065fa6b73 498 Gene3D G3DSA:2.60.120.260 347 498 1.8E-18 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_23960 3c28fa4a6391331948cc04b065fa6b73 498 SUPERFAMILY SSF49785 348 495 5.1E-8 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_23960 3c28fa4a6391331948cc04b065fa6b73 498 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 69 300 3.1E-13 T 14-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 AMIS_7100 19ee20b24d2d7fad5c36fd98913d407d 96 Gene3D G3DSA:1.20.59.10 12 96 3.1E-22 T 14-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AMIS_7100 19ee20b24d2d7fad5c36fd98913d407d 96 SUPERFAMILY SSF48600 21 78 4.27E-12 T 14-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AMIS_7100 19ee20b24d2d7fad5c36fd98913d407d 96 SMART SM00830 25 86 1.0E-8 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AMIS_7100 19ee20b24d2d7fad5c36fd98913d407d 96 Pfam PF01817 Chorismate mutase type II 25 80 5.6E-11 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AMIS_7100 19ee20b24d2d7fad5c36fd98913d407d 96 TIGRFAM TIGR01808 CM_M_hiGC-arch: chorismate mutase 21 94 1.7E-21 T 14-10-2018 IPR010958 Chorismate mutase, high GC Gram-positive bacteria/archaeal AMIS_17370 7f1b46dd66105eb57a5b804fb70d48bc 184 Gene3D G3DSA:2.40.260.10 31 184 1.8E-22 T 14-10-2018 IPR023365 Sortase domain superfamily AMIS_17370 7f1b46dd66105eb57a5b804fb70d48bc 184 SUPERFAMILY SSF63817 44 184 1.77E-12 T 14-10-2018 IPR023365 Sortase domain superfamily AMIS_17370 7f1b46dd66105eb57a5b804fb70d48bc 184 Pfam PF04203 Sortase family 46 184 2.2E-16 T 14-10-2018 IPR005754 Sortase family AMIS_10920 3a72471357b57316599fe1dc3ed90950 131 Gene3D G3DSA:3.10.129.10 1 128 1.0E-38 T 14-10-2018 AMIS_10920 3a72471357b57316599fe1dc3ed90950 131 Pfam PF13279 Thioesterase-like superfamily 6 110 1.8E-17 T 14-10-2018 AMIS_10920 3a72471357b57316599fe1dc3ed90950 131 SUPERFAMILY SSF54637 2 129 4.99E-35 T 14-10-2018 IPR029069 HotDog domain superfamily AMIS_63480 bfc562681f9e3a8394afcac002a19fbe 529 Gene3D G3DSA:3.50.50.60 213 313 4.8E-13 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_63480 bfc562681f9e3a8394afcac002a19fbe 529 SUPERFAMILY SSF51905 4 502 2.42E-40 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_63480 bfc562681f9e3a8394afcac002a19fbe 529 Gene3D G3DSA:3.50.50.60 3 113 9.9E-12 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_63480 bfc562681f9e3a8394afcac002a19fbe 529 Pfam PF01593 Flavin containing amine oxidoreductase 15 293 1.3E-10 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 AMIS_7280 9b16705af27cfc3a00a9e160218efae7 306 Gene3D G3DSA:3.90.550.10 1 213 8.9E-31 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_7280 9b16705af27cfc3a00a9e160218efae7 306 SUPERFAMILY SSF53448 1 217 3.38E-37 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_7280 9b16705af27cfc3a00a9e160218efae7 306 Pfam PF00535 Glycosyl transferase family 2 8 164 5.6E-20 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AMIS_44190 50d0a52cf7d28ad9f5cd673726698f56 306 SUPERFAMILY SSF161098 69 297 5.36E-57 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_44190 50d0a52cf7d28ad9f5cd673726698f56 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 302 8.8E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_44190 50d0a52cf7d28ad9f5cd673726698f56 306 Gene3D G3DSA:1.10.3720.10 65 305 1.6E-64 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_52550 b5ceefa044bb16237fa565ea75e7ed15 174 Gene3D G3DSA:3.40.630.30 32 172 2.8E-16 T 14-10-2018 AMIS_52550 b5ceefa044bb16237fa565ea75e7ed15 174 SUPERFAMILY SSF55729 69 160 5.51E-17 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_52550 b5ceefa044bb16237fa565ea75e7ed15 174 Pfam PF13302 Acetyltransferase (GNAT) domain 70 153 1.5E-10 T 14-10-2018 IPR000182 GNAT domain AMIS_39750 f1949b24952f80b7d9008be56c1fdb9c 843 SUPERFAMILY SSF52009 720 821 3.4E-23 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 AMIS_39750 f1949b24952f80b7d9008be56c1fdb9c 843 Gene3D G3DSA:3.30.470.20 136 184 7.4E-7 T 14-10-2018 AMIS_39750 f1949b24952f80b7d9008be56c1fdb9c 843 Gene3D G3DSA:3.30.1490.20 49 135 4.1E-30 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AMIS_39750 f1949b24952f80b7d9008be56c1fdb9c 843 Gene3D G3DSA:3.50.30.10 721 826 2.7E-28 T 14-10-2018 AMIS_39750 f1949b24952f80b7d9008be56c1fdb9c 843 Pfam PF00391 PEP-utilising enzyme, mobile domain 747 818 1.2E-17 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AMIS_39750 f1949b24952f80b7d9008be56c1fdb9c 843 Gene3D G3DSA:3.30.1490.20 1 48 5.7E-8 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AMIS_39750 f1949b24952f80b7d9008be56c1fdb9c 843 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 51 172 1.8E-37 T 14-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 AMIS_39750 f1949b24952f80b7d9008be56c1fdb9c 843 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 186 224 5.3E-7 T 14-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 AMIS_39750 f1949b24952f80b7d9008be56c1fdb9c 843 SUPERFAMILY SSF56059 9 227 2.24E-63 T 14-10-2018 AMIS_39750 f1949b24952f80b7d9008be56c1fdb9c 843 Gene3D G3DSA:3.30.470.20 185 229 2.0E-9 T 14-10-2018 AMIS_31330 da09aa1718aa5e036d64da17dd7d9305 294 Pfam PF13460 NAD(P)H-binding 8 147 7.3E-19 T 14-10-2018 IPR016040 NAD(P)-binding domain AMIS_31330 da09aa1718aa5e036d64da17dd7d9305 294 Gene3D G3DSA:3.40.50.720 7 294 4.4E-49 T 14-10-2018 AMIS_31330 da09aa1718aa5e036d64da17dd7d9305 294 SUPERFAMILY SSF51735 8 258 1.84E-31 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_74310 84768af5fa697d2315b3608b25a9af38 258 Gene3D G3DSA:2.40.10.10 44 246 5.8E-65 T 14-10-2018 AMIS_74310 84768af5fa697d2315b3608b25a9af38 258 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 54 69 3.9E-11 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AMIS_74310 84768af5fa697d2315b3608b25a9af38 258 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 111 125 3.9E-11 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AMIS_74310 84768af5fa697d2315b3608b25a9af38 258 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 199 211 3.9E-11 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AMIS_74310 84768af5fa697d2315b3608b25a9af38 258 SMART SM00020 31 250 1.8E-58 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 AMIS_74310 84768af5fa697d2315b3608b25a9af38 258 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 200 211 - T 14-10-2018 IPR033116 Serine proteases, trypsin family, serine active site AMIS_74310 84768af5fa697d2315b3608b25a9af38 258 SUPERFAMILY SSF50494 30 254 2.16E-59 T 14-10-2018 IPR009003 Peptidase S1, PA clan AMIS_74310 84768af5fa697d2315b3608b25a9af38 258 Gene3D G3DSA:2.40.10.10 38 244 5.8E-65 T 14-10-2018 AMIS_74310 84768af5fa697d2315b3608b25a9af38 258 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 64 69 - T 14-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 AMIS_74310 84768af5fa697d2315b3608b25a9af38 258 Pfam PF00089 Trypsin 32 248 4.5E-47 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 AMIS_44140 262e39cdac7be62fb2a4c4674e53d642 213 Gene3D G3DSA:2.30.180.10 51 210 4.1E-12 T 14-10-2018 IPR036378 FAS1 domain superfamily AMIS_44140 262e39cdac7be62fb2a4c4674e53d642 213 Pfam PF02469 Fasciclin domain 76 209 3.6E-12 T 14-10-2018 IPR000782 FAS1 domain AMIS_44140 262e39cdac7be62fb2a4c4674e53d642 213 SMART SM00554 86 210 2.6E-8 T 14-10-2018 IPR000782 FAS1 domain AMIS_44140 262e39cdac7be62fb2a4c4674e53d642 213 SUPERFAMILY SSF82153 72 210 4.97E-11 T 14-10-2018 IPR036378 FAS1 domain superfamily AMIS_1760 b495655df1655f79cb65a8e185612fab 687 SUPERFAMILY SSF50993 4 418 7.59E-91 T 14-10-2018 AMIS_1760 b495655df1655f79cb65a8e185612fab 687 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 6 410 3.5E-100 T 14-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 AMIS_1760 b495655df1655f79cb65a8e185612fab 687 Pfam PF00326 Prolyl oligopeptidase family 469 684 1.1E-61 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AMIS_1760 b495655df1655f79cb65a8e185612fab 687 SUPERFAMILY SSF53474 425 681 5.46E-41 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_1760 b495655df1655f79cb65a8e185612fab 687 Gene3D G3DSA:3.40.50.1820 25 680 5.1E-265 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_1760 b495655df1655f79cb65a8e185612fab 687 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 480 504 6.1E-50 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMIS_1760 b495655df1655f79cb65a8e185612fab 687 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 615 637 6.1E-50 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMIS_1760 b495655df1655f79cb65a8e185612fab 687 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 508 527 6.1E-50 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMIS_1760 b495655df1655f79cb65a8e185612fab 687 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 454 472 6.1E-50 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMIS_1760 b495655df1655f79cb65a8e185612fab 687 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 538 558 6.1E-50 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMIS_1760 b495655df1655f79cb65a8e185612fab 687 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 597 612 6.1E-50 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMIS_1760 b495655df1655f79cb65a8e185612fab 687 Gene3D G3DSA:2.130.10.120 74 412 5.1E-265 T 14-10-2018 AMIS_13320 c901759be51951d0836d43cd8c87735f 549 Pfam PF00474 Sodium:solute symporter family 42 445 1.1E-19 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AMIS_13320 c901759be51951d0836d43cd8c87735f 549 Gene3D G3DSA:1.20.1730.10 32 521 1.2E-33 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily AMIS_47730 19eb65b3503141fba208b78b66d03aa2 249 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_47730 19eb65b3503141fba208b78b66d03aa2 249 SMART SM00382 32 220 1.2E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_47730 19eb65b3503141fba208b78b66d03aa2 249 SUPERFAMILY SSF52540 8 230 1.73E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_47730 19eb65b3503141fba208b78b66d03aa2 249 Gene3D G3DSA:3.40.50.300 6 243 1.3E-68 T 14-10-2018 AMIS_47730 19eb65b3503141fba208b78b66d03aa2 249 Pfam PF00005 ABC transporter 23 171 2.3E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_11410 c621bef000ee2578a1846b14092f0876 647 SMART SM00729 264 487 8.1E-25 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AMIS_11410 c621bef000ee2578a1846b14092f0876 647 Gene3D G3DSA:3.80.30.20 263 451 8.3E-19 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe AMIS_11410 c621bef000ee2578a1846b14092f0876 647 TIGRFAM TIGR03960 rSAM_fuse_unch: radical SAM family uncharacterized protein 12 618 2.3E-208 T 14-10-2018 IPR023862 Conserved hypothetical protein CHP03960, radical SAM AMIS_11410 c621bef000ee2578a1846b14092f0876 647 SUPERFAMILY SSF102114 230 635 5.36E-48 T 14-10-2018 AMIS_11410 c621bef000ee2578a1846b14092f0876 647 Pfam PF04055 Radical SAM superfamily 268 433 5.6E-17 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMIS_33220 11afd7cd7ff6f16575049ef2e6b7ec30 315 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 27 290 1.2E-29 T 14-10-2018 IPR017039 Virulence factor BrkB AMIS_33220 11afd7cd7ff6f16575049ef2e6b7ec30 315 PIRSF PIRSF035875 10 313 4.8E-78 T 14-10-2018 IPR017039 Virulence factor BrkB AMIS_33220 11afd7cd7ff6f16575049ef2e6b7ec30 315 Pfam PF03631 Virulence factor BrkB 36 292 2.4E-61 T 14-10-2018 IPR017039 Virulence factor BrkB AMIS_72040 fb09389c96eede0e5b06448766b2f047 200 SUPERFAMILY SSF52788 3 195 2.62E-31 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily AMIS_72040 fb09389c96eede0e5b06448766b2f047 200 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 6 118 4.1E-17 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I AMIS_72040 fb09389c96eede0e5b06448766b2f047 200 SMART SM00226 4 197 1.4E-11 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I AMIS_72800 4d1d6aed1b71e16c54a743b9246c4214 688 SUPERFAMILY SSF53659 365 685 4.52E-92 T 14-10-2018 AMIS_72800 4d1d6aed1b71e16c54a743b9246c4214 688 Gene3D G3DSA:3.40.1390.20 201 342 2.6E-17 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily AMIS_72800 4d1d6aed1b71e16c54a743b9246c4214 688 SUPERFAMILY SSF75138 205 321 3.53E-19 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily AMIS_72800 4d1d6aed1b71e16c54a743b9246c4214 688 Pfam PF13500 AAA domain 3 184 8.6E-18 T 14-10-2018 AMIS_72800 4d1d6aed1b71e16c54a743b9246c4214 688 Gene3D G3DSA:3.40.50.10950 372 685 9.9E-138 T 14-10-2018 AMIS_72800 4d1d6aed1b71e16c54a743b9246c4214 688 SUPERFAMILY SSF52540 4 211 3.94E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_72800 4d1d6aed1b71e16c54a743b9246c4214 688 Gene3D G3DSA:3.40.50.10750 505 658 9.9E-138 T 14-10-2018 AMIS_72800 4d1d6aed1b71e16c54a743b9246c4214 688 Pfam PF01515 Phosphate acetyl/butaryl transferase 366 682 1.7E-125 T 14-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AMIS_72800 4d1d6aed1b71e16c54a743b9246c4214 688 Gene3D G3DSA:3.40.50.300 3 200 3.4E-12 T 14-10-2018 AMIS_72800 4d1d6aed1b71e16c54a743b9246c4214 688 Pfam PF07085 DRTGG domain 210 320 1.3E-21 T 14-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AMIS_72800 4d1d6aed1b71e16c54a743b9246c4214 688 PIRSF PIRSF006107 194 688 1.3E-164 T 14-10-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AMIS_72800 4d1d6aed1b71e16c54a743b9246c4214 688 PIRSF PIRSF006107 1 189 3.9E-8 T 14-10-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AMIS_72800 4d1d6aed1b71e16c54a743b9246c4214 688 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 381 682 4.1E-121 T 14-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AMIS_64900 597c93fc6c9d623958c2f79c1ca72b0f 260 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 34 247 1.6E-24 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain AMIS_64900 597c93fc6c9d623958c2f79c1ca72b0f 260 Gene3D G3DSA:3.40.50.1110 29 257 9.6E-70 T 14-10-2018 IPR036514 SGNH hydrolase superfamily AMIS_64900 597c93fc6c9d623958c2f79c1ca72b0f 260 SUPERFAMILY SSF52266 29 248 1.23E-55 T 14-10-2018 AMIS_650 513f2e66e3123cd124cd469bb7f7c74a 618 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 34 3.9E-10 T 14-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria AMIS_650 513f2e66e3123cd124cd469bb7f7c74a 618 Gene3D G3DSA:1.10.540.10 35 151 5.0E-5 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMIS_650 513f2e66e3123cd124cd469bb7f7c74a 618 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 162 275 2.1E-16 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMIS_650 513f2e66e3123cd124cd469bb7f7c74a 618 Gene3D G3DSA:1.20.140.10 295 468 1.5E-30 T 14-10-2018 AMIS_650 513f2e66e3123cd124cd469bb7f7c74a 618 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 291 462 4.2E-13 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMIS_650 513f2e66e3123cd124cd469bb7f7c74a 618 SUPERFAMILY SSF56645 36 298 9.16E-40 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMIS_650 513f2e66e3123cd124cd469bb7f7c74a 618 SUPERFAMILY SSF47203 295 484 1.61E-28 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMIS_650 513f2e66e3123cd124cd469bb7f7c74a 618 Gene3D G3DSA:2.40.110.10 160 294 4.1E-24 T 14-10-2018 AMIS_650 513f2e66e3123cd124cd469bb7f7c74a 618 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 480 614 3.8E-30 T 14-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain AMIS_76850 51b8a58f8052f2ee70984f888e81db10 325 SUPERFAMILY SSF55347 130 293 9.97E-39 T 14-10-2018 AMIS_76850 51b8a58f8052f2ee70984f888e81db10 325 Gene3D G3DSA:3.40.50.720 2 156 6.0E-44 T 14-10-2018 AMIS_76850 51b8a58f8052f2ee70984f888e81db10 325 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 138 200 2.9E-5 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 AMIS_76850 51b8a58f8052f2ee70984f888e81db10 325 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 6 122 1.7E-20 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AMIS_76850 51b8a58f8052f2ee70984f888e81db10 325 SUPERFAMILY SSF51735 3 157 3.02E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_76850 51b8a58f8052f2ee70984f888e81db10 325 Gene3D G3DSA:3.30.360.10 157 325 1.7E-50 T 14-10-2018 AMIS_17860 9af7b61b0860f58f3d3b2656b1daad67 891 SUPERFAMILY SSF48208 390 866 5.87E-48 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AMIS_79880 3cb6a3e45d8c76adb48145cb5be82090 273 Pfam PF02517 CAAX protease self-immunity 103 195 5.1E-12 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 AMIS_43440 dca092c9ebbf85c7bd78661de2931fa1 207 SUPERFAMILY SSF48498 94 206 4.71E-19 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_43440 dca092c9ebbf85c7bd78661de2931fa1 207 Gene3D G3DSA:1.10.357.10 77 205 1.4E-33 T 14-10-2018 AMIS_43440 dca092c9ebbf85c7bd78661de2931fa1 207 SUPERFAMILY SSF46689 17 89 2.36E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_43440 dca092c9ebbf85c7bd78661de2931fa1 207 Gene3D G3DSA:1.10.10.60 11 76 1.4E-17 T 14-10-2018 AMIS_43440 dca092c9ebbf85c7bd78661de2931fa1 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 26 39 6.3E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_43440 dca092c9ebbf85c7bd78661de2931fa1 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 47 70 6.3E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_43440 dca092c9ebbf85c7bd78661de2931fa1 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 27 70 4.5E-14 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_61830 3850a4daf1dc060aa048556c88fdf94b 257 SUPERFAMILY SSF75217 85 256 2.03E-37 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases AMIS_61830 3850a4daf1dc060aa048556c88fdf94b 257 Gene3D G3DSA:3.30.1330.30 3 94 2.3E-16 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like AMIS_61830 3850a4daf1dc060aa048556c88fdf94b 257 SMART SM00967 28 97 4.1E-13 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 AMIS_61830 3850a4daf1dc060aa048556c88fdf94b 257 Gene3D G3DSA:3.40.1280.10 97 257 1.4E-49 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMIS_61830 3850a4daf1dc060aa048556c88fdf94b 257 SUPERFAMILY SSF55315 4 93 3.65E-18 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like AMIS_61830 3850a4daf1dc060aa048556c88fdf94b 257 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 28 94 4.6E-7 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 AMIS_61830 3850a4daf1dc060aa048556c88fdf94b 257 Pfam PF00588 SpoU rRNA Methylase family 108 250 1.0E-33 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AMIS_80000 2d99e8a9c10a0a418e76d917277d9dbc 237 Pfam PF13489 Methyltransferase domain 39 173 4.2E-10 T 14-10-2018 AMIS_80000 2d99e8a9c10a0a418e76d917277d9dbc 237 SUPERFAMILY SSF53335 25 190 1.99E-30 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_80000 2d99e8a9c10a0a418e76d917277d9dbc 237 Gene3D G3DSA:3.40.50.150 24 201 8.1E-27 T 14-10-2018 AMIS_32880 197b95e8aaf9f09a584839186467e0af 203 SUPERFAMILY SSF46689 16 90 1.44E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_32880 197b95e8aaf9f09a584839186467e0af 203 SUPERFAMILY SSF48498 91 193 1.33E-6 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_32880 197b95e8aaf9f09a584839186467e0af 203 Gene3D G3DSA:1.10.357.10 14 203 1.1E-19 T 14-10-2018 AMIS_15300 8856a444e9f66be45fec65593bd94ab8 270 Pfam PF05103 DivIVA protein 3 55 1.5E-11 T 14-10-2018 IPR007793 DivIVA family AMIS_15300 8856a444e9f66be45fec65593bd94ab8 270 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 3 39 6.3E-16 T 14-10-2018 IPR019933 DivIVA domain AMIS_18050 5fe7b01f2ab377861c4aa0896da97aa7 233 Gene3D G3DSA:1.10.287.70 112 209 4.5E-16 T 14-10-2018 AMIS_18050 5fe7b01f2ab377861c4aa0896da97aa7 233 SUPERFAMILY SSF81324 113 214 6.15E-15 T 14-10-2018 AMIS_18050 5fe7b01f2ab377861c4aa0896da97aa7 233 Pfam PF07885 Ion channel 127 205 2.4E-13 T 14-10-2018 IPR013099 Potassium channel domain AMIS_51520 eac8e8fcc1eec1ebf29adb55afe51aeb 479 Gene3D G3DSA:1.20.200.10 192 477 2.6E-60 T 14-10-2018 AMIS_51520 eac8e8fcc1eec1ebf29adb55afe51aeb 479 SUPERFAMILY SSF48557 8 475 2.59E-98 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 AMIS_51520 eac8e8fcc1eec1ebf29adb55afe51aeb 479 Pfam PF00221 Aromatic amino acid lyase 17 435 5.9E-95 T 14-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 AMIS_51520 eac8e8fcc1eec1ebf29adb55afe51aeb 479 Gene3D G3DSA:1.10.275.10 1 191 7.8E-30 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal AMIS_27210 7d169799ba57fb0532d3548db92db205 401 SUPERFAMILY SSF51395 9 379 1.83E-79 T 14-10-2018 AMIS_27210 7d169799ba57fb0532d3548db92db205 401 Pfam PF01070 FMN-dependent dehydrogenase 17 379 3.8E-106 T 14-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 AMIS_27210 7d169799ba57fb0532d3548db92db205 401 PIRSF PIRSF000138 3 383 1.8E-102 T 14-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 AMIS_27210 7d169799ba57fb0532d3548db92db205 401 TIGRFAM TIGR03966 actino_HemFlav: heme/flavin dehydrogenase, mycofactocin system 4 387 1.3E-205 T 14-10-2018 IPR023989 Heme/flavin dehydrogenase, Rv0694 AMIS_27210 7d169799ba57fb0532d3548db92db205 401 Gene3D G3DSA:3.20.20.70 7 387 3.4E-108 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_69680 d6c84df4edc9e7999ccc2a8d1c020343 141 SUPERFAMILY SSF47240 3 137 1.49E-31 T 14-10-2018 IPR009078 Ferritin-like superfamily AMIS_69680 d6c84df4edc9e7999ccc2a8d1c020343 141 Pfam PF14530 Domain of unknown function (DUF4439) 5 140 1.6E-38 T 14-10-2018 IPR029447 Domain of unknown function DUF4439 AMIS_69680 d6c84df4edc9e7999ccc2a8d1c020343 141 Gene3D G3DSA:1.20.1260.10 1 130 3.1E-35 T 14-10-2018 IPR012347 Ferritin-like AMIS_32440 fad30093d225a6e20410377f6e446c57 489 SUPERFAMILY SSF49503 202 314 8.66E-24 T 14-10-2018 IPR008972 Cupredoxin AMIS_32440 fad30093d225a6e20410377f6e446c57 489 Gene3D G3DSA:2.60.40.420 40 194 8.4E-44 T 14-10-2018 IPR008972 Cupredoxin AMIS_32440 fad30093d225a6e20410377f6e446c57 489 Gene3D G3DSA:2.60.40.420 351 489 1.1E-34 T 14-10-2018 IPR008972 Cupredoxin AMIS_32440 fad30093d225a6e20410377f6e446c57 489 SUPERFAMILY SSF49503 69 198 5.21E-30 T 14-10-2018 IPR008972 Cupredoxin AMIS_32440 fad30093d225a6e20410377f6e446c57 489 Pfam PF07732 Multicopper oxidase 84 197 2.1E-24 T 14-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 AMIS_32440 fad30093d225a6e20410377f6e446c57 489 SUPERFAMILY SSF49503 352 477 2.04E-24 T 14-10-2018 IPR008972 Cupredoxin AMIS_32440 fad30093d225a6e20410377f6e446c57 489 Pfam PF00394 Multicopper oxidase 254 314 9.1E-7 T 14-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 AMIS_32440 fad30093d225a6e20410377f6e446c57 489 Gene3D G3DSA:2.60.40.420 196 350 1.6E-46 T 14-10-2018 IPR008972 Cupredoxin AMIS_32440 fad30093d225a6e20410377f6e446c57 489 Pfam PF07731 Multicopper oxidase 373 487 1.1E-19 T 14-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 AMIS_3340 0ec7907cd02c1a2efd3260938b4a842a 397 Gene3D G3DSA:3.40.50.300 2 179 5.4E-45 T 14-10-2018 AMIS_3340 0ec7907cd02c1a2efd3260938b4a842a 397 SMART SM00382 39 181 1.1E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_3340 0ec7907cd02c1a2efd3260938b4a842a 397 Pfam PF13177 DNA polymerase III, delta subunit 37 180 1.1E-33 T 14-10-2018 AMIS_3340 0ec7907cd02c1a2efd3260938b4a842a 397 SUPERFAMILY SSF52540 5 219 3.45E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_5840 52e0ef5fa06a8c8219d8d89b57ed3773 55 Gene3D G3DSA:2.20.28.120 3 55 4.5E-26 T 14-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_5840 52e0ef5fa06a8c8219d8d89b57ed3773 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 5 55 6.5E-23 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_5840 52e0ef5fa06a8c8219d8d89b57ed3773 55 SUPERFAMILY SSF57829 3 55 1.95E-20 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 AMIS_5840 52e0ef5fa06a8c8219d8d89b57ed3773 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 7 55 19.874 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_5840 52e0ef5fa06a8c8219d8d89b57ed3773 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 23 42 - T 14-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_5840 52e0ef5fa06a8c8219d8d89b57ed3773 55 Pfam PF00471 Ribosomal protein L33 10 55 1.5E-24 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_31830 fd7c88ece4b65b751ba3e2d7fbfc6f1e 382 Pfam PF00107 Zinc-binding dehydrogenase 188 259 3.3E-9 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMIS_31830 fd7c88ece4b65b751ba3e2d7fbfc6f1e 382 Gene3D G3DSA:3.40.50.720 168 339 2.1E-120 T 14-10-2018 AMIS_31830 fd7c88ece4b65b751ba3e2d7fbfc6f1e 382 SUPERFAMILY SSF50129 1 178 4.11E-58 T 14-10-2018 IPR011032 GroES-like superfamily AMIS_31830 fd7c88ece4b65b751ba3e2d7fbfc6f1e 382 SUPERFAMILY SSF51735 154 341 2.23E-55 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_31830 fd7c88ece4b65b751ba3e2d7fbfc6f1e 382 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 139 8.3E-29 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMIS_31830 fd7c88ece4b65b751ba3e2d7fbfc6f1e 382 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AMIS_31830 fd7c88ece4b65b751ba3e2d7fbfc6f1e 382 Gene3D G3DSA:3.90.180.10 4 366 2.1E-120 T 14-10-2018 AMIS_27300 0d777629a99e28d1836c6ec7347c8f05 501 SUPERFAMILY SSF51905 263 479 9.71E-21 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_27300 0d777629a99e28d1836c6ec7347c8f05 501 Gene3D G3DSA:3.50.50.60 301 499 1.3E-37 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_27300 0d777629a99e28d1836c6ec7347c8f05 501 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 18 218 1.4E-12 T 14-10-2018 AMIS_27300 0d777629a99e28d1836c6ec7347c8f05 501 Gene3D G3DSA:3.50.50.60 9 158 4.1E-50 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_27300 0d777629a99e28d1836c6ec7347c8f05 501 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 138 146 1.1E-5 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMIS_27300 0d777629a99e28d1836c6ec7347c8f05 501 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 16 38 1.1E-5 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMIS_27300 0d777629a99e28d1836c6ec7347c8f05 501 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 177 201 1.1E-5 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMIS_27300 0d777629a99e28d1836c6ec7347c8f05 501 Gene3D G3DSA:3.50.50.60 159 246 4.8E-16 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_27300 0d777629a99e28d1836c6ec7347c8f05 501 SUPERFAMILY SSF51905 14 248 2.42E-51 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_5550 f598df59c9da1a1e138bfb47fa894c9f 472 SUPERFAMILY SSF53383 4 397 2.45E-86 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_5550 f598df59c9da1a1e138bfb47fa894c9f 472 Gene3D G3DSA:3.90.1150.10 8 388 5.5E-91 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMIS_5550 f598df59c9da1a1e138bfb47fa894c9f 472 Gene3D G3DSA:3.40.640.10 42 298 5.5E-91 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_5550 f598df59c9da1a1e138bfb47fa894c9f 472 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 45 338 2.0E-14 T 14-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 AMIS_64690 1453dcb1051354b5788b40c8abe14fd5 626 Gene3D G3DSA:2.60.40.10 388 470 4.1E-6 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_33340 7f60ff8f2207e231d3ce1847418ca0f4 164 SUPERFAMILY SSF48452 7 127 5.36E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_33340 7f60ff8f2207e231d3ce1847418ca0f4 164 Gene3D G3DSA:1.25.40.10 1 153 7.2E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_67130 3dce2f8334fba87f7e552b49e1297a8e 332 Gene3D G3DSA:2.40.10.500 108 192 4.0E-9 T 14-10-2018 AMIS_67130 3dce2f8334fba87f7e552b49e1297a8e 332 Gene3D G3DSA:2.40.10.500 193 277 3.6E-5 T 14-10-2018 AMIS_67130 3dce2f8334fba87f7e552b49e1297a8e 332 Gene3D G3DSA:2.120.10.30 1 88 1.4E-16 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AMIS_67130 3dce2f8334fba87f7e552b49e1297a8e 332 Pfam PF01436 NHL repeat 2 23 1.9E-6 T 14-10-2018 IPR001258 NHL repeat GO:0005515 AMIS_67130 3dce2f8334fba87f7e552b49e1297a8e 332 SUPERFAMILY SSF101898 2 233 3.14E-25 T 14-10-2018 AMIS_39530 e4f34fb8f392940b60b639a1ec739361 298 Pfam PF00892 EamA-like transporter family 11 139 2.3E-21 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMIS_39530 e4f34fb8f392940b60b639a1ec739361 298 Pfam PF00892 EamA-like transporter family 151 288 1.1E-19 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMIS_39530 e4f34fb8f392940b60b639a1ec739361 298 SUPERFAMILY SSF103481 194 288 1.1E-13 T 14-10-2018 AMIS_39530 e4f34fb8f392940b60b639a1ec739361 298 SUPERFAMILY SSF103481 45 139 1.23E-11 T 14-10-2018 AMIS_59230 2ed6a72898361e6b5c028a83c3b70b6e 201 SUPERFAMILY SSF143990 35 198 4.45E-51 T 14-10-2018 IPR037238 YbiA-like superfamily AMIS_59230 2ed6a72898361e6b5c028a83c3b70b6e 201 TIGRFAM TIGR02464 ribofla_fusion: conserved hypothetical protein 38 197 4.3E-49 T 14-10-2018 IPR012816 NADAR AMIS_59230 2ed6a72898361e6b5c028a83c3b70b6e 201 Gene3D G3DSA:1.10.357.40 40 201 1.7E-41 T 14-10-2018 IPR037238 YbiA-like superfamily AMIS_59230 2ed6a72898361e6b5c028a83c3b70b6e 201 Pfam PF08719 Domain of unknown function (DUF1768) 39 197 4.8E-53 T 14-10-2018 IPR012816 NADAR AMIS_53440 66fc7ab170420db1a34798adb02b0189 918 SUPERFAMILY SSF52540 46 448 2.17E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_53440 66fc7ab170420db1a34798adb02b0189 918 Gene3D G3DSA:1.10.3380.30 709 910 3.6E-17 T 14-10-2018 AMIS_53440 66fc7ab170420db1a34798adb02b0189 918 Pfam PF00270 DEAD/DEAH box helicase 37 186 2.2E-19 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMIS_53440 66fc7ab170420db1a34798adb02b0189 918 SMART SM00487 31 214 8.4E-31 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMIS_53440 66fc7ab170420db1a34798adb02b0189 918 Pfam PF08148 DSHCT (NUC185) domain 744 911 3.6E-38 T 14-10-2018 IPR012961 ATP-dependent RNA helicase Ski2, C-terminal AMIS_53440 66fc7ab170420db1a34798adb02b0189 918 SMART SM01142 741 917 6.9E-60 T 14-10-2018 IPR012961 ATP-dependent RNA helicase Ski2, C-terminal AMIS_53440 66fc7ab170420db1a34798adb02b0189 918 Gene3D G3DSA:3.40.50.300 10 209 6.7E-63 T 14-10-2018 AMIS_53440 66fc7ab170420db1a34798adb02b0189 918 SMART SM00490 342 434 2.6E-14 T 14-10-2018 IPR001650 Helicase, C-terminal AMIS_53440 66fc7ab170420db1a34798adb02b0189 918 Pfam PF13234 rRNA-processing arch domain 491 592 7.0E-6 T 14-10-2018 IPR025696 rRNA-processing arch domain AMIS_53440 66fc7ab170420db1a34798adb02b0189 918 Gene3D G3DSA:3.40.50.300 210 465 2.2E-55 T 14-10-2018 AMIS_53440 66fc7ab170420db1a34798adb02b0189 918 Pfam PF00271 Helicase conserved C-terminal domain 356 434 2.6E-4 T 14-10-2018 IPR001650 Helicase, C-terminal AMIS_65350 2f7078805e4a7568fad0df31a3954171 525 Gene3D G3DSA:1.25.40.10 7 223 2.8E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_65350 2f7078805e4a7568fad0df31a3954171 525 Gene3D G3DSA:2.60.40.10 423 525 3.7E-6 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_65350 2f7078805e4a7568fad0df31a3954171 525 SUPERFAMILY SSF49265 428 512 5.37E-8 T 14-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 AMIS_73120 a01184afb0c610adf0260761aec1bb3c 410 Gene3D G3DSA:2.80.10.50 288 377 1.9E-29 T 14-10-2018 AMIS_73120 a01184afb0c610adf0260761aec1bb3c 410 SUPERFAMILY SSF50370 284 408 8.78E-36 T 14-10-2018 IPR035992 Ricin B-like lectins AMIS_73120 a01184afb0c610adf0260761aec1bb3c 410 Gene3D G3DSA:2.80.10.50 378 410 5.4E-8 T 14-10-2018 AMIS_73120 a01184afb0c610adf0260761aec1bb3c 410 Gene3D G3DSA:2.60.120.200 36 287 3.2E-93 T 14-10-2018 AMIS_73120 a01184afb0c610adf0260761aec1bb3c 410 SUPERFAMILY SSF49899 37 280 3.85E-76 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily AMIS_73120 a01184afb0c610adf0260761aec1bb3c 410 SMART SM00458 283 410 6.6E-25 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_73120 a01184afb0c610adf0260761aec1bb3c 410 Pfam PF00722 Glycosyl hydrolases family 16 71 275 8.2E-39 T 14-10-2018 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 AMIS_73120 a01184afb0c610adf0260761aec1bb3c 410 Pfam PF00652 Ricin-type beta-trefoil lectin domain 287 407 2.4E-25 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_78410 2cbe551babf62ae4b762453f97246406 208 Pfam PF07510 Protein of unknown function (DUF1524) 73 201 7.9E-10 T 14-10-2018 IPR011089 Domain of unknown function DUF1524 AMIS_50380 8818dfb9bd25157ea3f71f81061e7414 407 Gene3D G3DSA:3.40.47.10 180 333 2.3E-144 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_50380 8818dfb9bd25157ea3f71f81061e7414 407 Gene3D G3DSA:3.40.47.10 4 406 2.3E-144 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_50380 8818dfb9bd25157ea3f71f81061e7414 407 Pfam PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal 266 364 2.5E-14 T 14-10-2018 IPR013746 Hydroxymethylglutaryl-coenzyme A synthase C-terminal domain GO:0004421|GO:0008299 KEGG: 00072+2.3.3.10|KEGG: 00280+2.3.3.10|KEGG: 00650+2.3.3.10|KEGG: 00900+2.3.3.10|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7571|MetaCyc: PWY-922|Reactome: R-HSA-1989781 AMIS_50380 8818dfb9bd25157ea3f71f81061e7414 407 SUPERFAMILY SSF53901 177 406 3.29E-49 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_50380 8818dfb9bd25157ea3f71f81061e7414 407 SUPERFAMILY SSF53901 4 172 7.68E-28 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_50380 8818dfb9bd25157ea3f71f81061e7414 407 Pfam PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal 65 169 6.3E-8 T 14-10-2018 IPR013528 Hydroxymethylglutaryl-coenzyme A synthase, N-terminal GO:0004421|GO:0008299 Reactome: R-HSA-1989781 AMIS_49470 7fe5049ed878395eb3222a2cfeb4990b 335 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 3 213 2.3E-76 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AMIS_49470 7fe5049ed878395eb3222a2cfeb4990b 335 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 3 320 4.4E-117 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AMIS_49470 7fe5049ed878395eb3222a2cfeb4990b 335 PIRSF PIRSF000267 1 335 3.4E-123 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AMIS_28690 e45361ae6d17ccee92135c0e0d4a71dd 493 Gene3D G3DSA:1.20.1250.20 262 474 8.1E-21 T 14-10-2018 AMIS_28690 e45361ae6d17ccee92135c0e0d4a71dd 493 Pfam PF07690 Major Facilitator Superfamily 22 296 2.1E-32 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_28690 e45361ae6d17ccee92135c0e0d4a71dd 493 Gene3D G3DSA:1.20.1720.10 17 223 5.0E-40 T 14-10-2018 AMIS_28690 e45361ae6d17ccee92135c0e0d4a71dd 493 SUPERFAMILY SSF103473 8 466 1.83E-64 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_28690 e45361ae6d17ccee92135c0e0d4a71dd 493 Pfam PF00083 Sugar (and other) transporter 308 461 5.5E-6 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AMIS_68260 f891fa0ac0bd957a45fce7b44571d4a3 100 Gene3D G3DSA:2.60.40.10 7 98 5.3E-17 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_68260 f891fa0ac0bd957a45fce7b44571d4a3 100 Pfam PF16561 Glycogen recognition site of AMP-activated protein kinase 33 90 2.4E-6 T 14-10-2018 IPR032640 AMP-activated protein kinase, glycogen-binding domain Reactome: R-HSA-1445148|Reactome: R-HSA-1632852|Reactome: R-HSA-2151209|Reactome: R-HSA-380972|Reactome: R-HSA-5628897|Reactome: R-HSA-6804756 AMIS_68260 f891fa0ac0bd957a45fce7b44571d4a3 100 SUPERFAMILY SSF81296 21 91 1.2E-13 T 14-10-2018 IPR014756 Immunoglobulin E-set AMIS_23730 51d2269b69b2712da3663be6c8ff6f48 172 PIRSF PIRSF008502 1 172 1.9E-42 T 14-10-2018 IPR012545 Protein of unknown function DUF1697 AMIS_23730 51d2269b69b2712da3663be6c8ff6f48 172 SUPERFAMILY SSF160379 1 171 1.57E-45 T 14-10-2018 AMIS_23730 51d2269b69b2712da3663be6c8ff6f48 172 Pfam PF08002 Protein of unknown function (DUF1697) 1 106 6.6E-35 T 14-10-2018 IPR012545 Protein of unknown function DUF1697 AMIS_23730 51d2269b69b2712da3663be6c8ff6f48 172 Gene3D G3DSA:3.30.70.1280 1 87 9.3E-25 T 14-10-2018 AMIS_57560 dd600595fab2e94967eb0f9a62f1b54b 649 Gene3D G3DSA:2.130.10.80 53 198 1.3E-16 T 14-10-2018 IPR037293 Galactose oxidase, central domain superfamily AMIS_57560 dd600595fab2e94967eb0f9a62f1b54b 649 SUPERFAMILY SSF81296 550 648 6.58E-19 T 14-10-2018 IPR014756 Immunoglobulin E-set AMIS_57560 dd600595fab2e94967eb0f9a62f1b54b 649 SUPERFAMILY SSF50965 65 142 1.7E-6 T 14-10-2018 IPR011043 Galactose oxidase/kelch, beta-propeller AMIS_57560 dd600595fab2e94967eb0f9a62f1b54b 649 Gene3D G3DSA:2.60.40.10 556 649 1.7E-22 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_57560 dd600595fab2e94967eb0f9a62f1b54b 649 SUPERFAMILY SSF50965 263 550 3.27E-29 T 14-10-2018 IPR011043 Galactose oxidase/kelch, beta-propeller AMIS_57560 dd600595fab2e94967eb0f9a62f1b54b 649 Gene3D G3DSA:2.130.10.80 247 555 1.6E-56 T 14-10-2018 IPR037293 Galactose oxidase, central domain superfamily AMIS_57560 dd600595fab2e94967eb0f9a62f1b54b 649 Pfam PF09118 Domain of unknown function (DUF1929) 554 648 1.8E-19 T 14-10-2018 IPR015202 Galactose oxidase-like, Early set domain AMIS_73210 2106bdb7e6d144dbbcbf84cad45c6f69 410 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 7 320 4.5E-109 T 14-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 AMIS_73210 2106bdb7e6d144dbbcbf84cad45c6f69 410 Pfam PF03741 Integral membrane protein TerC family 70 274 4.4E-48 T 14-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 AMIS_36740 cb45701544ac0314aa686098f6b9e66e 185 Pfam PF09860 Uncharacterized protein conserved in bacteria (DUF2087) 110 177 9.6E-15 T 14-10-2018 IPR018656 Domain of unknown function DUF2087 AMIS_5220 4b858e6a3ac7f4571c7b2c518e8426e6 257 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 14 193 2.6E-4 T 14-10-2018 AMIS_5220 4b858e6a3ac7f4571c7b2c518e8426e6 257 Gene3D G3DSA:3.40.50.720 2 257 1.4E-75 T 14-10-2018 AMIS_5220 4b858e6a3ac7f4571c7b2c518e8426e6 257 SUPERFAMILY SSF51735 13 256 4.03E-75 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_5220 4b858e6a3ac7f4571c7b2c518e8426e6 257 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMIS_5220 4b858e6a3ac7f4571c7b2c518e8426e6 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 150 4.1E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_5220 4b858e6a3ac7f4571c7b2c518e8426e6 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 4.1E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_5220 4b858e6a3ac7f4571c7b2c518e8426e6 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 89 100 4.1E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_5220 4b858e6a3ac7f4571c7b2c518e8426e6 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 89 100 2.3E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_5220 4b858e6a3ac7f4571c7b2c518e8426e6 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 2.3E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_5220 4b858e6a3ac7f4571c7b2c518e8426e6 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 2.3E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_5220 4b858e6a3ac7f4571c7b2c518e8426e6 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 2.3E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_5220 4b858e6a3ac7f4571c7b2c518e8426e6 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 2.3E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_5220 4b858e6a3ac7f4571c7b2c518e8426e6 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 2.3E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_5220 4b858e6a3ac7f4571c7b2c518e8426e6 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 22 255 1.0E-55 T 14-10-2018 AMIS_43800 36f5eba8018bc672a6fea9499e293c7a 140 ProSitePatterns PS01117 MarR-type HTH domain signature. 61 95 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site AMIS_43800 36f5eba8018bc672a6fea9499e293c7a 140 Gene3D G3DSA:1.10.10.10 2 139 1.8E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_43800 36f5eba8018bc672a6fea9499e293c7a 140 SMART SM00347 22 123 6.6E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_43800 36f5eba8018bc672a6fea9499e293c7a 140 SUPERFAMILY SSF46785 3 137 2.92E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_43800 36f5eba8018bc672a6fea9499e293c7a 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 63 78 1.3E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_43800 36f5eba8018bc672a6fea9499e293c7a 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 82 98 1.3E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_43800 36f5eba8018bc672a6fea9499e293c7a 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 113 133 1.3E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_43800 36f5eba8018bc672a6fea9499e293c7a 140 Pfam PF12802 MarR family 29 86 6.0E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_26280 612f3dcf5df3b374ca6e4f136d5810c0 1472 Pfam PF03752 Short repeats of unknown function 115 156 2.5E-12 T 14-10-2018 IPR005506 Protein of unknown function DUF312 AMIS_26280 612f3dcf5df3b374ca6e4f136d5810c0 1472 Pfam PF03752 Short repeats of unknown function 671 707 2.1E-6 T 14-10-2018 IPR005506 Protein of unknown function DUF312 AMIS_26280 612f3dcf5df3b374ca6e4f136d5810c0 1472 Pfam PF03752 Short repeats of unknown function 162 202 1.4E-13 T 14-10-2018 IPR005506 Protein of unknown function DUF312 AMIS_26280 612f3dcf5df3b374ca6e4f136d5810c0 1472 Pfam PF03752 Short repeats of unknown function 69 106 7.5E-12 T 14-10-2018 IPR005506 Protein of unknown function DUF312 AMIS_26280 612f3dcf5df3b374ca6e4f136d5810c0 1472 Pfam PF03752 Short repeats of unknown function 768 810 1.9E-14 T 14-10-2018 IPR005506 Protein of unknown function DUF312 AMIS_26280 612f3dcf5df3b374ca6e4f136d5810c0 1472 Pfam PF03752 Short repeats of unknown function 209 248 4.5E-11 T 14-10-2018 IPR005506 Protein of unknown function DUF312 AMIS_26280 612f3dcf5df3b374ca6e4f136d5810c0 1472 Gene3D G3DSA:2.170.16.10 1169 1309 2.5E-38 T 14-10-2018 AMIS_26280 612f3dcf5df3b374ca6e4f136d5810c0 1472 Pfam PF15531 Bacterial toxin 27 1350 1431 1.1E-5 T 14-10-2018 IPR029112 Bacterial toxin 27 AMIS_26280 612f3dcf5df3b374ca6e4f136d5810c0 1472 SUPERFAMILY SSF51294 1173 1308 4.06E-19 T 14-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AMIS_26280 612f3dcf5df3b374ca6e4f136d5810c0 1472 Pfam PF07591 Pretoxin HINT domain 1184 1309 1.2E-13 T 14-10-2018 AMIS_26280 612f3dcf5df3b374ca6e4f136d5810c0 1472 SMART SM00306 1170 1267 7.5E-14 T 14-10-2018 IPR003587 Hint domain N-terminal Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AMIS_17280 f235803ad34ece5e90943717794d5779 301 SUPERFAMILY SSF51735 5 297 1.08E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_17280 f235803ad34ece5e90943717794d5779 301 Gene3D G3DSA:3.40.50.720 11 295 1.6E-46 T 14-10-2018 AMIS_17280 f235803ad34ece5e90943717794d5779 301 Pfam PF01370 NAD dependent epimerase/dehydratase family 13 215 4.1E-21 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AMIS_18710 c8b4a0cbb48419b279dd2a1665daa13b 204 SUPERFAMILY SSF46689 5 76 4.26E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_18710 c8b4a0cbb48419b279dd2a1665daa13b 204 SUPERFAMILY SSF48498 81 189 6.07E-9 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_18710 c8b4a0cbb48419b279dd2a1665daa13b 204 Gene3D G3DSA:1.10.357.10 1 191 6.7E-41 T 14-10-2018 AMIS_18710 c8b4a0cbb48419b279dd2a1665daa13b 204 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 86 148 6.2E-7 T 14-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal AMIS_45300 1b4092739b7bcd3c233eb03a3a19f81d 386 SUPERFAMILY SSF63825 158 366 8.37E-14 T 14-10-2018 AMIS_45300 1b4092739b7bcd3c233eb03a3a19f81d 386 Pfam PF05787 Bacterial protein of unknown function (DUF839) 163 240 8.8E-12 T 14-10-2018 IPR008557 Protein of unknown function DUF839 AMIS_45300 1b4092739b7bcd3c233eb03a3a19f81d 386 Pfam PF05787 Bacterial protein of unknown function (DUF839) 123 150 5.5E-8 T 14-10-2018 IPR008557 Protein of unknown function DUF839 AMIS_43640 5bfb4e480e4e0433f50509752e0dbd4c 215 SUPERFAMILY SSF48498 105 200 7.31E-12 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_43640 5bfb4e480e4e0433f50509752e0dbd4c 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 36 73 2.1E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_43640 5bfb4e480e4e0433f50509752e0dbd4c 215 SUPERFAMILY SSF46689 18 82 3.64E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_43640 5bfb4e480e4e0433f50509752e0dbd4c 215 Gene3D G3DSA:1.10.357.10 18 211 3.0E-31 T 14-10-2018 AMIS_46360 f608ba8f9493b38483c8bbb7e71e0a63 237 Gene3D G3DSA:3.40.50.1820 10 235 2.4E-23 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_46360 f608ba8f9493b38483c8bbb7e71e0a63 237 SUPERFAMILY SSF53474 11 233 1.62E-22 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_46360 f608ba8f9493b38483c8bbb7e71e0a63 237 Pfam PF07859 alpha/beta hydrolase fold 64 146 4.1E-5 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 AMIS_48080 739a094e4f1f327b5760886590eae959 462 PRINTS PR01036 Tetracycline resistance protein TetB signature 10 34 1.9E-7 T 14-10-2018 AMIS_48080 739a094e4f1f327b5760886590eae959 462 PRINTS PR01036 Tetracycline resistance protein TetB signature 394 413 1.9E-7 T 14-10-2018 AMIS_48080 739a094e4f1f327b5760886590eae959 462 PRINTS PR01036 Tetracycline resistance protein TetB signature 70 92 1.9E-7 T 14-10-2018 AMIS_48080 739a094e4f1f327b5760886590eae959 462 PRINTS PR01036 Tetracycline resistance protein TetB signature 132 156 1.9E-7 T 14-10-2018 AMIS_48080 739a094e4f1f327b5760886590eae959 462 Gene3D G3DSA:1.20.1720.10 7 231 1.9E-58 T 14-10-2018 AMIS_48080 739a094e4f1f327b5760886590eae959 462 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 8 411 1.2E-85 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 AMIS_48080 739a094e4f1f327b5760886590eae959 462 Gene3D G3DSA:1.20.1250.20 253 445 2.3E-20 T 14-10-2018 AMIS_48080 739a094e4f1f327b5760886590eae959 462 SUPERFAMILY SSF103473 2 442 4.71E-76 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_48080 739a094e4f1f327b5760886590eae959 462 Pfam PF07690 Major Facilitator Superfamily 12 403 6.7E-61 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_39820 0327d7040ccb752041a4af4f65b16f7a 426 Pfam PF07690 Major Facilitator Superfamily 33 375 4.4E-38 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_39820 0327d7040ccb752041a4af4f65b16f7a 426 PRINTS PR01036 Tetracycline resistance protein TetB signature 152 176 1.5E-6 T 14-10-2018 AMIS_39820 0327d7040ccb752041a4af4f65b16f7a 426 PRINTS PR01036 Tetracycline resistance protein TetB signature 28 52 1.5E-6 T 14-10-2018 AMIS_39820 0327d7040ccb752041a4af4f65b16f7a 426 PRINTS PR01036 Tetracycline resistance protein TetB signature 122 142 1.5E-6 T 14-10-2018 AMIS_39820 0327d7040ccb752041a4af4f65b16f7a 426 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 25 401 1.1E-93 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 AMIS_39820 0327d7040ccb752041a4af4f65b16f7a 426 SUPERFAMILY SSF103473 9 414 4.32E-61 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_39820 0327d7040ccb752041a4af4f65b16f7a 426 Gene3D G3DSA:1.20.1720.10 28 408 4.9E-102 T 14-10-2018 AMIS_39820 0327d7040ccb752041a4af4f65b16f7a 426 ProSitePatterns PS00216 Sugar transport proteins signature 1. 82 98 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AMIS_33090 c4c3fb2aab43758c65ed83a90c5fefcf 225 Gene3D G3DSA:1.10.357.10 1 166 9.0E-41 T 14-10-2018 AMIS_33090 c4c3fb2aab43758c65ed83a90c5fefcf 225 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 58 2.8E-15 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_33090 c4c3fb2aab43758c65ed83a90c5fefcf 225 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 3.0E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_33090 c4c3fb2aab43758c65ed83a90c5fefcf 225 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 3.0E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_33090 c4c3fb2aab43758c65ed83a90c5fefcf 225 SUPERFAMILY SSF46689 2 75 1.6E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_53700 e16ecfe245e6705f44777386d1f98ad9 81 SUPERFAMILY SSF47598 17 60 1.06E-8 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 AMIS_18300 9facced1f2da0f8d96580bb06ba0d1e9 366 Pfam PF13439 Glycosyltransferase Family 4 34 168 1.0E-21 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AMIS_18300 9facced1f2da0f8d96580bb06ba0d1e9 366 Pfam PF00534 Glycosyl transferases group 1 178 332 3.8E-29 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 AMIS_18300 9facced1f2da0f8d96580bb06ba0d1e9 366 Gene3D G3DSA:3.40.50.2000 167 342 3.4E-62 T 14-10-2018 AMIS_18300 9facced1f2da0f8d96580bb06ba0d1e9 366 Gene3D G3DSA:3.40.50.2000 64 355 3.4E-62 T 14-10-2018 AMIS_18300 9facced1f2da0f8d96580bb06ba0d1e9 366 SUPERFAMILY SSF53756 37 358 1.19E-72 T 14-10-2018 AMIS_71030 885ec938e9c08e66e0b2a25147235aa9 264 Gene3D G3DSA:3.90.850.10 56 263 1.6E-79 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AMIS_71030 885ec938e9c08e66e0b2a25147235aa9 264 Pfam PF10370 Domain of unknown function (DUF2437) 2 55 8.5E-16 T 14-10-2018 IPR018833 Domain of unknown function DUF2437 AMIS_71030 885ec938e9c08e66e0b2a25147235aa9 264 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 60 261 6.0E-65 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 AMIS_71030 885ec938e9c08e66e0b2a25147235aa9 264 Gene3D G3DSA:2.30.30.370 1 55 3.8E-14 T 14-10-2018 AMIS_71030 885ec938e9c08e66e0b2a25147235aa9 264 SUPERFAMILY SSF56529 52 261 2.09E-74 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AMIS_79490 9749fce553c1c2ba2025eb42338db01d 228 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_79490 9749fce553c1c2ba2025eb42338db01d 228 Pfam PF00005 ABC transporter 25 171 9.8E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_79490 9749fce553c1c2ba2025eb42338db01d 228 SMART SM00382 32 219 6.0E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_79490 9749fce553c1c2ba2025eb42338db01d 228 Gene3D G3DSA:3.40.50.300 2 227 1.2E-61 T 14-10-2018 AMIS_79490 9749fce553c1c2ba2025eb42338db01d 228 SUPERFAMILY SSF52540 5 221 1.49E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_13800 2c9331b9758a72d6b0ac23ebf6cb2d71 991 SUPERFAMILY SSF52540 14 248 4.99E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_13800 2c9331b9758a72d6b0ac23ebf6cb2d71 991 SMART SM00421 926 983 1.9E-24 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_13800 2c9331b9758a72d6b0ac23ebf6cb2d71 991 Pfam PF00196 Bacterial regulatory proteins, luxR family 928 983 1.0E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_13800 2c9331b9758a72d6b0ac23ebf6cb2d71 991 SUPERFAMILY SSF46894 923 989 1.56E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_13800 2c9331b9758a72d6b0ac23ebf6cb2d71 991 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 943 959 4.9E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_13800 2c9331b9758a72d6b0ac23ebf6cb2d71 991 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 959 971 4.9E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_13800 2c9331b9758a72d6b0ac23ebf6cb2d71 991 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 929 943 4.9E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_13800 2c9331b9758a72d6b0ac23ebf6cb2d71 991 Gene3D G3DSA:1.25.40.10 570 806 9.2E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_13800 2c9331b9758a72d6b0ac23ebf6cb2d71 991 Gene3D G3DSA:1.10.10.10 919 991 1.1E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_13800 2c9331b9758a72d6b0ac23ebf6cb2d71 991 Pfam PF13191 AAA ATPase domain 14 179 8.7E-30 T 14-10-2018 AMIS_13800 2c9331b9758a72d6b0ac23ebf6cb2d71 991 SUPERFAMILY SSF48452 574 681 2.78E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_60620 5e842d143e953816aa8d169c6076a027 712 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 316 494 1.1E-58 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AMIS_60620 5e842d143e953816aa8d169c6076a027 712 Gene3D G3DSA:3.40.50.720 314 497 7.0E-66 T 14-10-2018 AMIS_60620 5e842d143e953816aa8d169c6076a027 712 Gene3D G3DSA:1.10.1040.50 498 703 9.1E-57 T 14-10-2018 AMIS_60620 5e842d143e953816aa8d169c6076a027 712 SUPERFAMILY SSF48179 496 634 1.11E-18 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMIS_60620 5e842d143e953816aa8d169c6076a027 712 Gene3D G3DSA:3.90.226.10 1 310 6.8E-101 T 14-10-2018 AMIS_60620 5e842d143e953816aa8d169c6076a027 712 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 497 594 3.0E-17 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AMIS_60620 5e842d143e953816aa8d169c6076a027 712 SUPERFAMILY SSF52096 3 299 2.06E-55 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMIS_60620 5e842d143e953816aa8d169c6076a027 712 SUPERFAMILY SSF48179 620 711 7.74E-17 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMIS_60620 5e842d143e953816aa8d169c6076a027 712 SUPERFAMILY SSF51735 313 495 3.0E-55 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_60620 5e842d143e953816aa8d169c6076a027 712 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 204 4.4E-28 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AMIS_36630 109fa914eb49c28c156c47ff11736739 255 SUPERFAMILY SSF81301 8 100 8.72E-6 T 14-10-2018 AMIS_36630 109fa914eb49c28c156c47ff11736739 255 Gene3D G3DSA:3.30.460.10 5 128 3.3E-16 T 14-10-2018 AMIS_24470 4f5d0dc6ef07fa851e766a0c08421150 342 Gene3D G3DSA:3.40.50.2300 73 328 4.3E-65 T 14-10-2018 AMIS_24470 4f5d0dc6ef07fa851e766a0c08421150 342 Gene3D G3DSA:3.40.50.2300 163 333 4.3E-65 T 14-10-2018 AMIS_24470 4f5d0dc6ef07fa851e766a0c08421150 342 SUPERFAMILY SSF53822 64 330 6.09E-50 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_24470 4f5d0dc6ef07fa851e766a0c08421150 342 Pfam PF13377 Periplasmic binding protein-like domain 171 336 8.7E-29 T 14-10-2018 AMIS_24470 4f5d0dc6ef07fa851e766a0c08421150 342 SMART SM00354 7 76 1.4E-14 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_24470 4f5d0dc6ef07fa851e766a0c08421150 342 Gene3D G3DSA:1.10.260.40 1 64 8.5E-18 T 14-10-2018 AMIS_24470 4f5d0dc6ef07fa851e766a0c08421150 342 SUPERFAMILY SSF47413 7 65 1.29E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_24470 4f5d0dc6ef07fa851e766a0c08421150 342 Pfam PF00356 Bacterial regulatory proteins, lacI family 9 54 2.1E-11 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_72750 7f359bda71911fd7171475bc982fb279 300 SUPERFAMILY SSF69593 109 238 1.44E-25 T 14-10-2018 AMIS_72750 7f359bda71911fd7171475bc982fb279 300 SMART SM00563 125 237 1.4E-31 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AMIS_72750 7f359bda71911fd7171475bc982fb279 300 Pfam PF01553 Acyltransferase 123 235 2.3E-21 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AMIS_26170 e2df0e54e54ebea65878eae231c6af1a 862 Pfam PF02687 FtsX-like permease family 766 855 4.9E-12 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AMIS_48600 a6f253f1b93459dd0ec2850e778c3987 496 Gene3D G3DSA:3.40.605.10 22 456 2.8E-149 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AMIS_48600 a6f253f1b93459dd0ec2850e778c3987 496 Gene3D G3DSA:3.40.309.10 248 448 2.8E-149 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AMIS_48600 a6f253f1b93459dd0ec2850e778c3987 496 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 4 479 3.3E-210 T 14-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 AMIS_48600 a6f253f1b93459dd0ec2850e778c3987 496 SUPERFAMILY SSF53720 3 481 2.62E-143 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMIS_48600 a6f253f1b93459dd0ec2850e778c3987 496 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 273 284 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AMIS_48600 a6f253f1b93459dd0ec2850e778c3987 496 Pfam PF00171 Aldehyde dehydrogenase family 15 475 2.9E-137 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AMIS_49760 2b4c8d083517bcd10f09cd568b6e2b89 281 Pfam PF13560 Helix-turn-helix domain 6 85 5.9E-16 T 14-10-2018 AMIS_49760 2b4c8d083517bcd10f09cd568b6e2b89 281 SUPERFAMILY SSF47413 30 81 5.04E-11 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_49760 2b4c8d083517bcd10f09cd568b6e2b89 281 Gene3D G3DSA:1.10.260.40 27 94 9.7E-11 T 14-10-2018 AMIS_49760 2b4c8d083517bcd10f09cd568b6e2b89 281 SMART SM00530 10 82 1.5E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMIS_4050 66f18fc97551c72c2ad42a0d3e4cd3da 298 Pfam PF01061 ABC-2 type transporter 59 256 5.2E-17 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 AMIS_23000 ca5859ae2a5e735709a0736d4b0b6e4d 220 SUPERFAMILY SSF48008 78 213 2.88E-13 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AMIS_23000 ca5859ae2a5e735709a0736d4b0b6e4d 220 Gene3D G3DSA:1.10.10.10 6 73 4.9E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_23000 ca5859ae2a5e735709a0736d4b0b6e4d 220 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 72 7.1E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_23000 ca5859ae2a5e735709a0736d4b0b6e4d 220 SMART SM00345 14 72 1.0E-12 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_23000 ca5859ae2a5e735709a0736d4b0b6e4d 220 Pfam PF07729 FCD domain 82 203 4.1E-18 T 14-10-2018 IPR011711 GntR, C-terminal AMIS_23000 ca5859ae2a5e735709a0736d4b0b6e4d 220 SMART SM00895 82 204 6.4E-8 T 14-10-2018 IPR011711 GntR, C-terminal AMIS_23000 ca5859ae2a5e735709a0736d4b0b6e4d 220 SUPERFAMILY SSF46785 7 76 4.72E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_23000 ca5859ae2a5e735709a0736d4b0b6e4d 220 Gene3D G3DSA:1.20.120.530 76 216 3.4E-16 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AMIS_68410 8f73a0eb92f60753697fe8413020a4c0 431 Pfam PF13360 PQQ-like domain 172 376 6.7E-8 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat AMIS_68410 8f73a0eb92f60753697fe8413020a4c0 431 SUPERFAMILY SSF50998 84 316 1.24E-7 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AMIS_72590 b4520998acfa21c892036f7bf9e746e1 207 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 4 197 38.391 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMIS_72590 b4520998acfa21c892036f7bf9e746e1 207 SUPERFAMILY SSF52096 24 196 8.29E-64 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMIS_72590 b4520998acfa21c892036f7bf9e746e1 207 Gene3D G3DSA:3.90.226.10 7 200 1.7E-71 T 14-10-2018 AMIS_72590 b4520998acfa21c892036f7bf9e746e1 207 Pfam PF00574 Clp protease 22 196 2.8E-74 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA AMIS_72590 b4520998acfa21c892036f7bf9e746e1 207 PRINTS PR00127 Clp protease catalytic subunit P signature 23 38 9.6E-46 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMIS_72590 b4520998acfa21c892036f7bf9e746e1 207 PRINTS PR00127 Clp protease catalytic subunit P signature 63 83 9.6E-46 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMIS_72590 b4520998acfa21c892036f7bf9e746e1 207 PRINTS PR00127 Clp protease catalytic subunit P signature 94 111 9.6E-46 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMIS_72590 b4520998acfa21c892036f7bf9e746e1 207 PRINTS PR00127 Clp protease catalytic subunit P signature 172 191 9.6E-46 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMIS_72590 b4520998acfa21c892036f7bf9e746e1 207 PRINTS PR00127 Clp protease catalytic subunit P signature 115 134 9.6E-46 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMIS_63440 c5424a361d096da48bf158f230bbae92 304 ProSitePatterns PS00211 ABC transporters family signature. 128 142 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_63440 c5424a361d096da48bf158f230bbae92 304 Gene3D G3DSA:3.40.50.300 1 229 4.8E-69 T 14-10-2018 AMIS_63440 c5424a361d096da48bf158f230bbae92 304 SMART SM00382 28 204 2.1E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_63440 c5424a361d096da48bf158f230bbae92 304 SUPERFAMILY SSF52540 3 218 8.67E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_63440 c5424a361d096da48bf158f230bbae92 304 Pfam PF00005 ABC transporter 20 155 5.2E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_35110 e17ea146c0a9bc4d80c79e32cddbe1bd 239 Pfam PF06197 Protein of unknown function (DUF998) 14 204 3.5E-20 T 14-10-2018 IPR009339 Protein of unknown function DUF998 AMIS_16620 3af21ec5875f79a782ea829b9748b336 469 Pfam PF03703 Bacterial PH domain 92 171 6.8E-16 T 14-10-2018 IPR005182 Domain of unknown function DUF304 AMIS_16620 3af21ec5875f79a782ea829b9748b336 469 Pfam PF03703 Bacterial PH domain 275 328 7.8E-5 T 14-10-2018 IPR005182 Domain of unknown function DUF304 AMIS_16620 3af21ec5875f79a782ea829b9748b336 469 Pfam PF03703 Bacterial PH domain 385 457 2.3E-12 T 14-10-2018 IPR005182 Domain of unknown function DUF304 AMIS_16620 3af21ec5875f79a782ea829b9748b336 469 PIRSF PIRSF026631 33 469 5.8E-79 T 14-10-2018 IPR014529 Uncharacterised conserved protein UCP026631 AMIS_6680 2301041670770f7494e38e76900e0f29 149 Gene3D G3DSA:3.40.50.300 1 147 5.1E-32 T 14-10-2018 AMIS_6680 2301041670770f7494e38e76900e0f29 149 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 135 4.0E-24 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 AMIS_6680 2301041670770f7494e38e76900e0f29 149 SUPERFAMILY SSF52540 20 130 1.6E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_6680 2301041670770f7494e38e76900e0f29 149 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 5 127 6.1E-29 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 AMIS_2090 20fa74d140d2b75e6d8f3ce31ea97ab2 355 SUPERFAMILY SSF81345 16 347 2.35E-75 T 14-10-2018 IPR037294 ABC transporter, BtuC-like AMIS_2090 20fa74d140d2b75e6d8f3ce31ea97ab2 355 Pfam PF01032 FecCD transport family 28 348 7.6E-88 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AMIS_2090 20fa74d140d2b75e6d8f3ce31ea97ab2 355 Gene3D G3DSA:1.10.3470.10 15 353 4.3E-94 T 14-10-2018 IPR037294 ABC transporter, BtuC-like AMIS_74900 fd0756c3dc28cd15a83e90a5127d8c2f 176 Pfam PF13563 2'-5' RNA ligase superfamily 16 161 7.3E-21 T 14-10-2018 AMIS_74900 fd0756c3dc28cd15a83e90a5127d8c2f 176 Gene3D G3DSA:3.90.1140.10 8 176 2.4E-31 T 14-10-2018 AMIS_74900 fd0756c3dc28cd15a83e90a5127d8c2f 176 SUPERFAMILY SSF55144 8 175 1.69E-30 T 14-10-2018 IPR009097 Cyclic phosphodiesterase AMIS_39900 61a6691d4edfca7b7d1561db99f3c68f 295 Pfam PF07728 AAA domain (dynein-related subfamily) 45 173 9.0E-10 T 14-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 AMIS_39900 61a6691d4edfca7b7d1561db99f3c68f 295 SUPERFAMILY SSF52540 33 259 4.73E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_39900 61a6691d4edfca7b7d1561db99f3c68f 295 SMART SM00382 41 210 3.6E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_39900 61a6691d4edfca7b7d1561db99f3c68f 295 Gene3D G3DSA:3.40.50.300 20 230 5.5E-25 T 14-10-2018 AMIS_61440 0019180601b4c0d3511b2df5db0e9fae 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 250 1.2E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_61440 0019180601b4c0d3511b2df5db0e9fae 281 Gene3D G3DSA:1.10.3720.10 7 268 5.6E-58 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_61440 0019180601b4c0d3511b2df5db0e9fae 281 SUPERFAMILY SSF161098 7 281 3.66E-64 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_32720 5a1f10da66274e793509249fa4d11a72 142 Pfam PF03259 Roadblock/LC7 domain 14 104 8.5E-18 T 14-10-2018 IPR004942 Roadblock/LAMTOR2 domain AMIS_32720 5a1f10da66274e793509249fa4d11a72 142 SUPERFAMILY SSF103196 9 129 3.79E-28 T 14-10-2018 AMIS_32720 5a1f10da66274e793509249fa4d11a72 142 Gene3D G3DSA:3.30.450.30 10 134 1.6E-35 T 14-10-2018 AMIS_32720 5a1f10da66274e793509249fa4d11a72 142 SMART SM00960 14 104 2.1E-23 T 14-10-2018 IPR004942 Roadblock/LAMTOR2 domain AMIS_11450 8acd719a32d4e416ddf914b549af8160 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 14-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_11450 8acd719a32d4e416ddf914b549af8160 85 SUPERFAMILY SSF110324 2 82 1.74E-30 T 14-10-2018 AMIS_11450 8acd719a32d4e416ddf914b549af8160 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 69 4.0E-13 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_11450 8acd719a32d4e416ddf914b549af8160 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 6.8E-35 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_11450 8acd719a32d4e416ddf914b549af8160 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 6.8E-35 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_11450 8acd719a32d4e416ddf914b549af8160 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 6.8E-35 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_11450 8acd719a32d4e416ddf914b549af8160 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 81 6.5E-35 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_11450 8acd719a32d4e416ddf914b549af8160 85 Pfam PF01016 Ribosomal L27 protein 2 80 3.7E-35 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_11450 8acd719a32d4e416ddf914b549af8160 85 Gene3D G3DSA:2.40.50.100 20 84 6.6E-26 T 14-10-2018 AMIS_11450 8acd719a32d4e416ddf914b549af8160 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 83 27.09 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_9920 d697c1286cb2103ee0d4948ffe32175c 282 SMART SM00530 17 72 6.5E-4 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMIS_9920 d697c1286cb2103ee0d4948ffe32175c 282 Gene3D G3DSA:1.10.260.40 5 70 3.1E-8 T 14-10-2018 AMIS_9920 d697c1286cb2103ee0d4948ffe32175c 282 Pfam PF13560 Helix-turn-helix domain 13 70 2.6E-14 T 14-10-2018 AMIS_9920 d697c1286cb2103ee0d4948ffe32175c 282 SUPERFAMILY SSF47413 11 67 1.16E-6 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_49710 f79b1527363c8bfe9c77b5edbdd315ea 325 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 7 286 6.7E-48 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AMIS_49710 f79b1527363c8bfe9c77b5edbdd315ea 325 Gene3D G3DSA:3.40.50.1100 28 138 3.4E-78 T 14-10-2018 AMIS_49710 f79b1527363c8bfe9c77b5edbdd315ea 325 SUPERFAMILY SSF53686 5 307 2.49E-59 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMIS_49710 f79b1527363c8bfe9c77b5edbdd315ea 325 Gene3D G3DSA:3.40.50.1100 7 296 3.4E-78 T 14-10-2018 AMIS_49710 f79b1527363c8bfe9c77b5edbdd315ea 325 TIGRFAM TIGR03945 PLP_SbnA_fam: 2,3-diaminopropionate biosynthesis protein SbnA 5 304 3.2E-116 T 14-10-2018 IPR023927 2,3-diaminopropionate biosynthesis protein SbnA AMIS_56350 0c135736e501d5beab1f72e1785c70e3 522 SUPERFAMILY SSF53335 318 511 3.53E-39 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_56350 0c135736e501d5beab1f72e1785c70e3 522 Gene3D G3DSA:3.50.50.60 6 295 6.2E-88 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_56350 0c135736e501d5beab1f72e1785c70e3 522 Pfam PF13649 Methyltransferase domain 357 450 9.1E-15 T 14-10-2018 AMIS_56350 0c135736e501d5beab1f72e1785c70e3 522 SUPERFAMILY SSF51905 1 301 3.32E-33 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_56350 0c135736e501d5beab1f72e1785c70e3 522 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 288 5.6E-19 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMIS_56350 0c135736e501d5beab1f72e1785c70e3 522 Gene3D G3DSA:3.50.50.60 114 225 6.2E-88 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_56350 0c135736e501d5beab1f72e1785c70e3 522 Gene3D G3DSA:3.40.50.150 324 520 3.5E-48 T 14-10-2018 AMIS_56350 0c135736e501d5beab1f72e1785c70e3 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 123 135 7.1E-12 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMIS_56350 0c135736e501d5beab1f72e1785c70e3 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 264 282 7.1E-12 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMIS_56350 0c135736e501d5beab1f72e1785c70e3 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 101 109 7.1E-12 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMIS_56350 0c135736e501d5beab1f72e1785c70e3 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 7 29 7.1E-12 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMIS_56350 0c135736e501d5beab1f72e1785c70e3 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 276 1.5E-8 T 14-10-2018 AMIS_56350 0c135736e501d5beab1f72e1785c70e3 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.5E-8 T 14-10-2018 AMIS_4440 e5c3cd12f84d684bdc477dd90e305e43 150 SUPERFAMILY SSF55729 2 148 8.31E-14 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_4440 e5c3cd12f84d684bdc477dd90e305e43 150 Gene3D G3DSA:3.40.630.30 1 149 2.5E-15 T 14-10-2018 AMIS_68750 d3328e3290f765c33cd2913a6a37de31 355 Pfam PF01339 CheB methylesterase 171 350 4.6E-46 T 14-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AMIS_68750 d3328e3290f765c33cd2913a6a37de31 355 SUPERFAMILY SSF52172 3 107 5.12E-30 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_68750 d3328e3290f765c33cd2913a6a37de31 355 Pfam PF00072 Response regulator receiver domain 6 109 3.1E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_68750 d3328e3290f765c33cd2913a6a37de31 355 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 4 355 33.331 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AMIS_68750 d3328e3290f765c33cd2913a6a37de31 355 Gene3D G3DSA:3.40.50.180 163 354 1.8E-51 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal AMIS_68750 d3328e3290f765c33cd2913a6a37de31 355 PIRSF PIRSF000876 2 355 7.8E-113 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AMIS_68750 d3328e3290f765c33cd2913a6a37de31 355 Gene3D G3DSA:3.40.50.2300 3 137 4.8E-34 T 14-10-2018 AMIS_68750 d3328e3290f765c33cd2913a6a37de31 355 SUPERFAMILY SSF52738 167 354 1.57E-50 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal AMIS_68750 d3328e3290f765c33cd2913a6a37de31 355 SMART SM00448 4 126 8.3E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_34610 a6e9a42f981044798ef8de3a144c7916 197 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 144 176 1.4E-8 T 14-10-2018 IPR001451 Hexapeptide repeat AMIS_34610 a6e9a42f981044798ef8de3a144c7916 197 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 152 180 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AMIS_34610 a6e9a42f981044798ef8de3a144c7916 197 SUPERFAMILY SSF51161 18 196 4.16E-51 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily AMIS_34610 a6e9a42f981044798ef8de3a144c7916 197 SMART SM01266 18 72 1.1E-16 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 AMIS_34610 a6e9a42f981044798ef8de3a144c7916 197 Pfam PF12464 Maltose acetyltransferase 20 71 2.7E-14 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 AMIS_34610 a6e9a42f981044798ef8de3a144c7916 197 Gene3D G3DSA:2.160.10.10 14 197 2.9E-63 T 14-10-2018 AMIS_69990 1d72b18cfabb27f8a514034930fbc763 526 Pfam PF13450 NAD(P)-binding Rossmann-like domain 16 55 2.9E-7 T 14-10-2018 AMIS_69990 1d72b18cfabb27f8a514034930fbc763 526 Pfam PF01593 Flavin containing amine oxidoreductase 228 335 4.8E-6 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 AMIS_69990 1d72b18cfabb27f8a514034930fbc763 526 Gene3D G3DSA:3.50.50.60 226 339 4.0E-15 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_69990 1d72b18cfabb27f8a514034930fbc763 526 SUPERFAMILY SSF51905 5 351 4.99E-38 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_69990 1d72b18cfabb27f8a514034930fbc763 526 Gene3D G3DSA:3.50.50.60 12 145 4.2E-11 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_14790 d916b016467160a8ddcf026fbb6c7f82 213 Pfam PF01066 CDP-alcohol phosphatidyltransferase 47 111 5.7E-8 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AMIS_14790 d916b016467160a8ddcf026fbb6c7f82 213 Gene3D G3DSA:1.20.120.1760 31 213 5.7E-26 T 14-10-2018 AMIS_4840 235fb699645ea5901be722c492101316 214 SUPERFAMILY SSF52172 3 132 1.41E-14 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_4840 235fb699645ea5901be722c492101316 214 Gene3D G3DSA:3.40.50.12740 5 214 3.3E-32 T 14-10-2018 AMIS_4840 235fb699645ea5901be722c492101316 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 168 195 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_4840 235fb699645ea5901be722c492101316 214 SUPERFAMILY SSF46894 142 213 2.65E-14 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_4840 235fb699645ea5901be722c492101316 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 159 208 1.2E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_4840 235fb699645ea5901be722c492101316 214 Pfam PF00072 Response regulator receiver domain 7 118 3.4E-9 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_4840 235fb699645ea5901be722c492101316 214 SMART SM00421 151 208 2.0E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_4840 235fb699645ea5901be722c492101316 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 9.2E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_4840 235fb699645ea5901be722c492101316 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 9.2E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_4840 235fb699645ea5901be722c492101316 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 9.2E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_40870 e4b989c34c7ad5a1b580b93cb34df737 80 Gene3D G3DSA:2.30.110.10 1 59 7.9E-13 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AMIS_40870 e4b989c34c7ad5a1b580b93cb34df737 80 Pfam PF04075 F420H(2)-dependent quinone reductase 2 58 5.6E-7 T 14-10-2018 IPR004378 F420H(2)-dependent quinone reductase GO:0016491|GO:0055114 AMIS_4350 b0982e20ae998aecfa5f2b3a357c63de 1670 SMART SM00306 1187 1288 1.3E-9 T 14-10-2018 IPR003587 Hint domain N-terminal Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AMIS_4350 b0982e20ae998aecfa5f2b3a357c63de 1670 SUPERFAMILY SSF51294 1190 1328 7.96E-17 T 14-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AMIS_4350 b0982e20ae998aecfa5f2b3a357c63de 1670 Pfam PF07591 Pretoxin HINT domain 1203 1329 1.2E-21 T 14-10-2018 AMIS_4350 b0982e20ae998aecfa5f2b3a357c63de 1670 Gene3D G3DSA:2.170.16.10 1186 1329 2.8E-35 T 14-10-2018 AMIS_51250 e8b47a8d433f0806f905c099eb83e376 459 Gene3D G3DSA:1.20.5.100 225 256 3.0E-13 T 14-10-2018 AMIS_51250 e8b47a8d433f0806f905c099eb83e376 459 PIRSF PIRSF500134 1 459 1.9E-156 T 14-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 AMIS_51250 e8b47a8d433f0806f905c099eb83e376 459 SMART SM00984 341 444 2.3E-40 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AMIS_51250 e8b47a8d433f0806f905c099eb83e376 459 SUPERFAMILY SSF51735 1 203 1.8E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_51250 e8b47a8d433f0806f905c099eb83e376 459 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 439 1.0E-128 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AMIS_51250 e8b47a8d433f0806f905c099eb83e376 459 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 193 6.4E-60 T 14-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AMIS_51250 e8b47a8d433f0806f905c099eb83e376 459 SUPERFAMILY SSF48179 226 320 1.84E-31 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMIS_51250 e8b47a8d433f0806f905c099eb83e376 459 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 342 443 1.9E-28 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AMIS_51250 e8b47a8d433f0806f905c099eb83e376 459 PIRSF PIRSF000124 1 459 4.8E-130 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AMIS_51250 e8b47a8d433f0806f905c099eb83e376 459 Gene3D G3DSA:3.40.50.720 1 204 7.7E-71 T 14-10-2018 AMIS_51250 e8b47a8d433f0806f905c099eb83e376 459 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 227 318 8.9E-37 T 14-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AMIS_51250 e8b47a8d433f0806f905c099eb83e376 459 SUPERFAMILY SSF52413 329 454 5.75E-34 T 14-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 AMIS_51250 e8b47a8d433f0806f905c099eb83e376 459 Gene3D G3DSA:3.40.50.720 257 459 6.4E-69 T 14-10-2018 AMIS_15400 811a09f195c0d144d50231de35759f2d 235 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 5 210 2.1E-30 T 14-10-2018 IPR003111 Lon, substrate-binding domain AMIS_15400 811a09f195c0d144d50231de35759f2d 235 Gene3D G3DSA:1.20.58.1480 135 216 2.9E-7 T 14-10-2018 AMIS_15400 811a09f195c0d144d50231de35759f2d 235 Gene3D G3DSA:2.30.130.40 2 129 3.0E-33 T 14-10-2018 AMIS_15400 811a09f195c0d144d50231de35759f2d 235 SUPERFAMILY SSF88697 4 209 1.24E-46 T 14-10-2018 IPR015947 PUA-like superfamily AMIS_15400 811a09f195c0d144d50231de35759f2d 235 SMART SM00464 4 210 8.9E-36 T 14-10-2018 IPR003111 Lon, substrate-binding domain AMIS_66610 3858887198b618191753ac08e0c14eda 197 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 28 0.0012 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMIS_66610 3858887198b618191753ac08e0c14eda 197 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMIS_66610 3858887198b618191753ac08e0c14eda 197 Pfam PF07963 Prokaryotic N-terminal methylation motif 4 28 3.5E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMIS_46410 f9ffd4e266481abb2f15dc6194b708bc 259 Pfam PF12698 ABC-2 family transporter protein 50 248 1.0E-9 T 14-10-2018 AMIS_67820 a636f28086115f43752e8b33d382d5ca 306 Pfam PF00781 Diacylglycerol kinase catalytic domain 40 129 1.3E-18 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 AMIS_67820 a636f28086115f43752e8b33d382d5ca 306 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 46 297 3.8E-36 T 14-10-2018 IPR005218 Diacylglycerol/lipid kinase AMIS_67820 a636f28086115f43752e8b33d382d5ca 306 Gene3D G3DSA:2.60.200.40 129 289 6.4E-35 T 14-10-2018 AMIS_67820 a636f28086115f43752e8b33d382d5ca 306 Gene3D G3DSA:3.40.50.10330 5 128 1.5E-21 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 AMIS_67820 a636f28086115f43752e8b33d382d5ca 306 SUPERFAMILY SSF111331 3 299 2.78E-58 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily AMIS_79750 1d88a151676ca8696512edcc871098cd 239 Gene3D G3DSA:3.40.50.150 5 216 1.9E-23 T 14-10-2018 AMIS_79750 1d88a151676ca8696512edcc871098cd 239 SUPERFAMILY SSF53335 46 177 3.69E-18 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_79750 1d88a151676ca8696512edcc871098cd 239 Pfam PF13578 Methyltransferase domain 70 171 1.8E-18 T 14-10-2018 AMIS_44440 2760183d0f70b28852801f06e50582fc 776 SUPERFAMILY SSF52540 159 360 2.93E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_44440 2760183d0f70b28852801f06e50582fc 776 Gene3D G3DSA:3.40.50.300 156 311 5.4E-23 T 14-10-2018 AMIS_44440 2760183d0f70b28852801f06e50582fc 776 SUPERFAMILY SSF52200 5 110 1.83E-23 T 14-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily AMIS_44440 2760183d0f70b28852801f06e50582fc 776 SUPERFAMILY SSF48452 590 740 4.81E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_44440 2760183d0f70b28852801f06e50582fc 776 Gene3D G3DSA:1.25.40.10 513 772 6.7E-45 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_44440 2760183d0f70b28852801f06e50582fc 776 Gene3D G3DSA:3.40.50.10140 4 128 1.6E-22 T 14-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily AMIS_44440 2760183d0f70b28852801f06e50582fc 776 Pfam PF13424 Tetratricopeptide repeat 546 614 8.7E-8 T 14-10-2018 AMIS_44440 2760183d0f70b28852801f06e50582fc 776 Pfam PF13424 Tetratricopeptide repeat 673 741 1.1E-15 T 14-10-2018 AMIS_44440 2760183d0f70b28852801f06e50582fc 776 Pfam PF13676 TIR domain 6 113 6.5E-29 T 14-10-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 AMIS_44440 2760183d0f70b28852801f06e50582fc 776 SMART SM00255 3 133 0.0055 T 14-10-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 AMIS_44440 2760183d0f70b28852801f06e50582fc 776 Pfam PF13374 Tetratricopeptide repeat 630 666 5.7E-5 T 14-10-2018 AMIS_44440 2760183d0f70b28852801f06e50582fc 776 SMART SM00028 627 660 32.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_44440 2760183d0f70b28852801f06e50582fc 776 SMART SM00028 711 744 23.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_44440 2760183d0f70b28852801f06e50582fc 776 SMART SM00028 669 702 18.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_22890 ddf7dd4dfd7fd8db52c9123a011cd23a 277 SUPERFAMILY SSF161098 11 266 4.49E-48 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_22890 ddf7dd4dfd7fd8db52c9123a011cd23a 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 261 1.6E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_22890 ddf7dd4dfd7fd8db52c9123a011cd23a 277 Gene3D G3DSA:1.10.3720.10 6 261 4.6E-43 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_57420 487664ab4cd2c6ccb3fef14dbdd3fab8 399 SUPERFAMILY SSF89796 7 399 3.01E-123 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily AMIS_57420 487664ab4cd2c6ccb3fef14dbdd3fab8 399 Pfam PF02515 CoA-transferase family III 8 376 2.4E-116 T 14-10-2018 IPR003673 CoA-transferase family III GO:0003824 AMIS_57420 487664ab4cd2c6ccb3fef14dbdd3fab8 399 Gene3D G3DSA:3.30.1540.10 230 328 1.6E-120 T 14-10-2018 AMIS_57420 487664ab4cd2c6ccb3fef14dbdd3fab8 399 Gene3D G3DSA:3.40.50.10540 7 393 1.6E-120 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily AMIS_58550 fa3e6db9e7314f4a138277a77d2473e6 277 Pfam PF01061 ABC-2 type transporter 34 242 4.1E-30 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 AMIS_58550 fa3e6db9e7314f4a138277a77d2473e6 277 PIRSF PIRSF006648 6 277 3.2E-82 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AMIS_23920 7dd2d68d4b209435c054b332de77cf33 411 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 115 253 4.1E-9 T 14-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like AMIS_6130 e72bc64b938fe1996d2ccf715c5ac986 122 SUPERFAMILY SSF50193 2 121 3.01E-49 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 AMIS_6130 e72bc64b938fe1996d2ccf715c5ac986 122 Pfam PF00238 Ribosomal protein L14p/L23e 2 122 1.4E-53 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AMIS_6130 e72bc64b938fe1996d2ccf715c5ac986 122 Gene3D G3DSA:2.40.150.20 1 122 4.3E-52 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 AMIS_6130 e72bc64b938fe1996d2ccf715c5ac986 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 14-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_6130 e72bc64b938fe1996d2ccf715c5ac986 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 26.037 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AMIS_6130 e72bc64b938fe1996d2ccf715c5ac986 122 SMART SM01374 1 122 9.4E-85 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AMIS_6130 e72bc64b938fe1996d2ccf715c5ac986 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 3.0E-56 T 14-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 AMIS_13100 3390d829f1151e8f6ce33f44260eb490 312 Pfam PF00698 Acyl transferase domain 7 278 1.2E-14 T 14-10-2018 IPR014043 Acyl transferase AMIS_13100 3390d829f1151e8f6ce33f44260eb490 312 Gene3D G3DSA:3.40.366.10 3 275 1.3E-77 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 AMIS_13100 3390d829f1151e8f6ce33f44260eb490 312 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 5 293 2.3E-13 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain AMIS_13100 3390d829f1151e8f6ce33f44260eb490 312 Gene3D G3DSA:3.30.70.250 122 185 1.3E-77 T 14-10-2018 AMIS_13100 3390d829f1151e8f6ce33f44260eb490 312 SUPERFAMILY SSF52151 2 303 7.06E-58 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMIS_13100 3390d829f1151e8f6ce33f44260eb490 312 SUPERFAMILY SSF55048 124 177 2.75E-10 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AMIS_39200 ef555ccd1a46ad76cc9168d428a39af5 523 SUPERFAMILY SSF103473 15 398 9.94E-50 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_39200 ef555ccd1a46ad76cc9168d428a39af5 523 Gene3D G3DSA:1.20.1250.20 9 394 1.5E-42 T 14-10-2018 AMIS_39200 ef555ccd1a46ad76cc9168d428a39af5 523 Pfam PF05977 Transmembrane secretion effector 5 517 3.2E-154 T 14-10-2018 IPR010290 Transmembrane secretion effector AMIS_39420 8666241c40242121e70cc056e698015f 161 ProDom PD485437 REGULATOR TRANSCRIPTIONAL FIS-TYPE HELIX-TURN-HELIX ACTIVATOR PLASMID FAMILY PHENOL-DEGRADATIVE FIS SIGMA-54 85 147 0.009 T 14-10-2018 IPR010523 Activator of aromatic catabolism AMIS_39420 8666241c40242121e70cc056e698015f 161 SUPERFAMILY SSF46785 8 144 3.33E-28 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_39420 8666241c40242121e70cc056e698015f 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 85 7.8E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_39420 8666241c40242121e70cc056e698015f 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 53 69 7.8E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_39420 8666241c40242121e70cc056e698015f 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 105 7.8E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_39420 8666241c40242121e70cc056e698015f 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 119 139 7.8E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_39420 8666241c40242121e70cc056e698015f 161 SMART SM00347 29 129 7.1E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_39420 8666241c40242121e70cc056e698015f 161 Pfam PF12802 MarR family 41 93 5.8E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_39420 8666241c40242121e70cc056e698015f 161 Gene3D G3DSA:1.10.10.10 4 145 3.2E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_57510 856511ecaebe85587fb48492fc5891d8 214 Pfam PF00857 Isochorismatase family 28 204 4.5E-33 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 AMIS_57510 856511ecaebe85587fb48492fc5891d8 214 Gene3D G3DSA:3.40.50.850 9 213 3.4E-59 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AMIS_57510 856511ecaebe85587fb48492fc5891d8 214 SUPERFAMILY SSF52499 14 210 1.44E-46 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AMIS_68740 9da85e813bd4589346290961e2a32d1d 210 SUPERFAMILY SSF48371 24 188 3.51E-17 T 14-10-2018 IPR016024 Armadillo-type fold AMIS_68740 9da85e813bd4589346290961e2a32d1d 210 Pfam PF13646 HEAT repeats 26 109 8.6E-8 T 14-10-2018 AMIS_68740 9da85e813bd4589346290961e2a32d1d 210 Pfam PF13646 HEAT repeats 116 202 1.6E-12 T 14-10-2018 AMIS_68740 9da85e813bd4589346290961e2a32d1d 210 Gene3D G3DSA:1.25.10.10 5 192 9.2E-19 T 14-10-2018 IPR011989 Armadillo-like helical AMIS_53740 12d9f9fbb45a12aa75e02adcaf97eb89 257 SMART SM00382 42 228 1.5E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_53740 12d9f9fbb45a12aa75e02adcaf97eb89 257 SUPERFAMILY SSF52540 16 232 1.0E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_53740 12d9f9fbb45a12aa75e02adcaf97eb89 257 Pfam PF00005 ABC transporter 33 179 6.1E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_53740 12d9f9fbb45a12aa75e02adcaf97eb89 257 Gene3D G3DSA:3.40.50.300 15 255 7.0E-67 T 14-10-2018 AMIS_12720 602885898672c0916c7beb3365d4e8cb 390 Gene3D G3DSA:2.70.70.10 230 388 1.3E-35 T 14-10-2018 IPR011055 Duplicated hybrid motif AMIS_12720 602885898672c0916c7beb3365d4e8cb 390 Pfam PF01551 Peptidase family M23 256 360 9.4E-22 T 14-10-2018 IPR016047 Peptidase M23 AMIS_12720 602885898672c0916c7beb3365d4e8cb 390 SUPERFAMILY SSF51261 231 379 4.13E-33 T 14-10-2018 IPR011055 Duplicated hybrid motif AMIS_18310 2b1dc876b3c8b0e551ff762bbd221275 313 Pfam PF00535 Glycosyl transferase family 2 8 136 1.3E-22 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AMIS_18310 2b1dc876b3c8b0e551ff762bbd221275 313 SUPERFAMILY SSF53448 5 235 2.34E-34 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_18310 2b1dc876b3c8b0e551ff762bbd221275 313 Gene3D G3DSA:3.90.550.10 2 222 3.4E-28 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_33010 e605339ded130a161dbe94d547a76fc3 262 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 3.6E-8 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_33010 e605339ded130a161dbe94d547a76fc3 262 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 3.6E-8 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_33010 e605339ded130a161dbe94d547a76fc3 262 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 3.6E-8 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_33010 e605339ded130a161dbe94d547a76fc3 262 SMART SM00422 2 71 1.3E-22 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_33010 e605339ded130a161dbe94d547a76fc3 262 Gene3D G3DSA:1.10.1660.10 1 114 1.3E-24 T 14-10-2018 AMIS_33010 e605339ded130a161dbe94d547a76fc3 262 Pfam PF00376 MerR family regulatory protein 3 40 2.3E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_33010 e605339ded130a161dbe94d547a76fc3 262 SUPERFAMILY SSF46955 2 105 6.96E-24 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily AMIS_69110 6ca0b727af570271f679ec593e04b770 347 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 5 324 2.3E-172 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMIS_69110 6ca0b727af570271f679ec593e04b770 347 PRINTS PR00142 RecA protein signature 244 273 5.6E-85 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMIS_69110 6ca0b727af570271f679ec593e04b770 347 PRINTS PR00142 RecA protein signature 166 195 5.6E-85 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMIS_69110 6ca0b727af570271f679ec593e04b770 347 PRINTS PR00142 RecA protein signature 128 157 5.6E-85 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMIS_69110 6ca0b727af570271f679ec593e04b770 347 PRINTS PR00142 RecA protein signature 94 123 5.6E-85 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMIS_69110 6ca0b727af570271f679ec593e04b770 347 PRINTS PR00142 RecA protein signature 211 239 5.6E-85 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMIS_69110 6ca0b727af570271f679ec593e04b770 347 PRINTS PR00142 RecA protein signature 298 315 5.6E-85 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMIS_69110 6ca0b727af570271f679ec593e04b770 347 SUPERFAMILY SSF52540 5 268 2.46E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_69110 6ca0b727af570271f679ec593e04b770 347 SUPERFAMILY SSF54752 269 327 6.28E-21 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal AMIS_69110 6ca0b727af570271f679ec593e04b770 347 Pfam PF00154 recA bacterial DNA recombination protein 8 269 7.2E-142 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMIS_69110 6ca0b727af570271f679ec593e04b770 347 SMART SM00382 58 229 1.4E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_69110 6ca0b727af570271f679ec593e04b770 347 Gene3D G3DSA:3.40.50.300 27 268 5.3E-81 T 14-10-2018 AMIS_69110 6ca0b727af570271f679ec593e04b770 347 Gene3D G3DSA:3.30.250.10 269 347 1.1E-29 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal AMIS_69110 6ca0b727af570271f679ec593e04b770 347 ProSitePatterns PS00321 recA signature. 214 222 - T 14-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 AMIS_69110 6ca0b727af570271f679ec593e04b770 347 Hamap MF_00268 Protein RecA [recA]. 6 330 52.564 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMIS_75170 998aef16e1cdd202bdd6e758fade119d 284 Gene3D G3DSA:3.30.950.10 120 235 1.0E-42 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 AMIS_75170 998aef16e1cdd202bdd6e758fade119d 284 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 10 231 33.54 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 AMIS_75170 998aef16e1cdd202bdd6e758fade119d 284 SUPERFAMILY SSF53790 9 229 8.51E-73 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 AMIS_75170 998aef16e1cdd202bdd6e758fade119d 284 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 15 282 2.0E-57 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 AMIS_75170 998aef16e1cdd202bdd6e758fade119d 284 Gene3D G3DSA:3.40.1010.10 2 119 3.8E-28 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 AMIS_75170 998aef16e1cdd202bdd6e758fade119d 284 PIRSF PIRSF005917 2 284 3.4E-88 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 AMIS_75170 998aef16e1cdd202bdd6e758fade119d 284 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 10 213 2.6E-31 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 AMIS_47060 1db2822d5c8b33a87103aa2d0c4e8273 289 Pfam PF12697 Alpha/beta hydrolase family 27 287 2.2E-19 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_47060 1db2822d5c8b33a87103aa2d0c4e8273 289 SUPERFAMILY SSF53474 7 288 4.85E-37 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_47060 1db2822d5c8b33a87103aa2d0c4e8273 289 Gene3D G3DSA:3.40.50.1820 6 289 1.3E-39 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_49010 df7ea427d7204d584e15011d2b4a2047 403 Gene3D G3DSA:3.30.565.10 285 401 2.2E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_49010 df7ea427d7204d584e15011d2b4a2047 403 Pfam PF07730 Histidine kinase 213 280 2.7E-17 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMIS_49010 df7ea427d7204d584e15011d2b4a2047 403 SUPERFAMILY SSF55874 291 400 1.0E-12 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_19630 0eebfa914e4972418992fea7fd3d4dca 198 Gene3D G3DSA:1.10.287.1080 4 117 7.4E-16 T 14-10-2018 AMIS_19630 0eebfa914e4972418992fea7fd3d4dca 198 SUPERFAMILY SSF101386 26 110 3.92E-8 T 14-10-2018 AMIS_260 5d3d4d8a424ebfd3f2a6c9d9939a6a14 292 SUPERFAMILY SSF51569 4 286 1.76E-69 T 14-10-2018 AMIS_260 5d3d4d8a424ebfd3f2a6c9d9939a6a14 292 Gene3D G3DSA:3.20.20.70 1 288 1.4E-114 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_260 5d3d4d8a424ebfd3f2a6c9d9939a6a14 292 Pfam PF00682 HMGL-like 4 269 1.8E-45 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 AMIS_28090 51c5f2a9264166a96b010c2963ce3d45 640 SUPERFAMILY SSF48208 65 407 5.1E-23 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AMIS_28090 51c5f2a9264166a96b010c2963ce3d45 640 Pfam PF07944 Beta-L-arabinofuranosidase, GH127 34 540 9.9E-122 T 14-10-2018 IPR012878 Beta-L-arabinofuranosidase, GH127 AMIS_49270 a4939c69d8051fe110db037471ff1b6c 523 Gene3D G3DSA:3.20.20.80 225 514 1.1E-48 T 14-10-2018 AMIS_49270 a4939c69d8051fe110db037471ff1b6c 523 SUPERFAMILY SSF51445 246 509 8.03E-23 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_40950 31aa2c9a15bed41b048b17c9bbe59fc2 251 TIGRFAM TIGR03083 TIGR03083: uncharacterized Actinobacterial protein TIGR03083 11 223 9.1E-27 T 14-10-2018 IPR017517 Conserved hypothetical protein CHP03083, actinobacterial-type AMIS_40950 31aa2c9a15bed41b048b17c9bbe59fc2 251 Pfam PF07398 MDMPI C-terminal domain 150 243 1.7E-20 T 14-10-2018 IPR010872 MDMPI C-terminal AMIS_40950 31aa2c9a15bed41b048b17c9bbe59fc2 251 SUPERFAMILY SSF109854 2 140 1.68E-10 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes AMIS_40950 31aa2c9a15bed41b048b17c9bbe59fc2 251 Pfam PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain 8 137 5.2E-21 T 14-10-2018 IPR024344 Mycothiol-dependent maleylpyruvate isomerase, metal-binding domain GO:0046872 AMIS_40950 31aa2c9a15bed41b048b17c9bbe59fc2 251 Gene3D G3DSA:1.20.120.450 1 141 4.6E-9 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes AMIS_1100 be6a389c2ba2061d20266e7af248fb3c 321 Gene3D G3DSA:2.60.200.40 177 286 3.1E-6 T 14-10-2018 AMIS_1100 be6a389c2ba2061d20266e7af248fb3c 321 SUPERFAMILY SSF111331 46 275 4.8E-13 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily AMIS_1100 be6a389c2ba2061d20266e7af248fb3c 321 Gene3D G3DSA:3.40.50.10330 131 176 3.1E-6 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 AMIS_47790 e20ad2104b44fc1cac2dc1659ab2363f 388 PIRSF PIRSF016578 1 384 1.7E-27 T 14-10-2018 AMIS_47790 e20ad2104b44fc1cac2dc1659ab2363f 388 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 9 112 2.2E-9 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMIS_47790 e20ad2104b44fc1cac2dc1659ab2363f 388 Gene3D G3DSA:1.10.540.10 5 113 6.8E-21 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMIS_47790 e20ad2104b44fc1cac2dc1659ab2363f 388 Gene3D G3DSA:1.20.140.10 208 385 1.1E-47 T 14-10-2018 AMIS_47790 e20ad2104b44fc1cac2dc1659ab2363f 388 SUPERFAMILY SSF56645 11 205 5.76E-39 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMIS_47790 e20ad2104b44fc1cac2dc1659ab2363f 388 SUPERFAMILY SSF47203 216 373 6.6E-21 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMIS_47790 e20ad2104b44fc1cac2dc1659ab2363f 388 Gene3D G3DSA:2.40.110.10 115 207 2.1E-25 T 14-10-2018 AMIS_47790 e20ad2104b44fc1cac2dc1659ab2363f 388 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 227 363 2.1E-15 T 14-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain AMIS_62320 bb5042ba0994026962c4f97fece79e68 153 SMART SM00732 8 115 2.1E-20 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 AMIS_62320 bb5042ba0994026962c4f97fece79e68 153 Pfam PF03652 Holliday junction resolvase 9 147 2.3E-39 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AMIS_62320 bb5042ba0994026962c4f97fece79e68 153 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 8 150 21.837 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AMIS_62320 bb5042ba0994026962c4f97fece79e68 153 SUPERFAMILY SSF53098 8 149 7.28E-33 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily AMIS_62320 bb5042ba0994026962c4f97fece79e68 153 Gene3D G3DSA:3.30.420.140 9 153 1.3E-40 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 AMIS_62320 bb5042ba0994026962c4f97fece79e68 153 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 11 147 7.5E-27 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AMIS_28320 dd64c84b93c4b08edb33a93af4fe7329 449 SUPERFAMILY SSF49785 321 448 2.04E-38 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_28320 dd64c84b93c4b08edb33a93af4fe7329 449 Gene3D G3DSA:2.115.10.20 16 314 1.3E-89 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMIS_28320 dd64c84b93c4b08edb33a93af4fe7329 449 Pfam PF03422 Carbohydrate binding module (family 6) 329 448 2.5E-43 T 14-10-2018 IPR005084 Carbohydrate binding module family 6 GO:0030246 AMIS_28320 dd64c84b93c4b08edb33a93af4fe7329 449 SMART SM00606 321 449 4.6E-48 T 14-10-2018 IPR006584 Cellulose binding, type IV GO:0030246 AMIS_28320 dd64c84b93c4b08edb33a93af4fe7329 449 SUPERFAMILY SSF75005 14 306 3.66E-69 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMIS_28320 dd64c84b93c4b08edb33a93af4fe7329 449 Pfam PF04616 Glycosyl hydrolases family 43 25 306 1.0E-54 T 14-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 AMIS_28320 dd64c84b93c4b08edb33a93af4fe7329 449 Gene3D G3DSA:2.60.120.260 322 449 5.8E-49 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_29420 2e26e02e957bf5ac1017b250c5554941 273 Pfam PF00881 Nitroreductase family 7 225 1.2E-32 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AMIS_29420 2e26e02e957bf5ac1017b250c5554941 273 Gene3D G3DSA:3.40.109.10 1 250 4.2E-35 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AMIS_29420 2e26e02e957bf5ac1017b250c5554941 273 SUPERFAMILY SSF55469 1 237 3.25E-31 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AMIS_54410 b2e0de28dc72716514a8882e61d2f313 249 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 123 246 2.3E-13 T 14-10-2018 AMIS_54410 b2e0de28dc72716514a8882e61d2f313 249 Gene3D G3DSA:2.60.120.200 35 246 2.7E-15 T 14-10-2018 AMIS_54410 b2e0de28dc72716514a8882e61d2f313 249 SUPERFAMILY SSF49899 33 246 3.35E-16 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily AMIS_7360 17da7400a230022ff9fd387e2f23bd96 419 SUPERFAMILY SSF56112 175 329 3.67E-7 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMIS_320 3fa55e566ec0c4fbeceb4e7706ce1f18 189 SUPERFAMILY SSF101874 17 186 1.44E-52 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily AMIS_320 3fa55e566ec0c4fbeceb4e7706ce1f18 189 Pfam PF04264 YceI-like domain 19 185 1.7E-46 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AMIS_320 3fa55e566ec0c4fbeceb4e7706ce1f18 189 Gene3D G3DSA:2.40.128.110 18 188 5.9E-51 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily AMIS_320 3fa55e566ec0c4fbeceb4e7706ce1f18 189 SMART SM00867 18 186 4.8E-64 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AMIS_13060 b9f906901d1556fcb523940b29e7a66d 462 Gene3D G3DSA:3.90.226.10 8 211 7.2E-59 T 14-10-2018 AMIS_13060 b9f906901d1556fcb523940b29e7a66d 462 SUPERFAMILY SSF52096 177 447 9.4E-62 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMIS_13060 b9f906901d1556fcb523940b29e7a66d 462 Pfam PF01039 Carboxyl transferase domain 32 450 7.7E-115 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 AMIS_13060 b9f906901d1556fcb523940b29e7a66d 462 SUPERFAMILY SSF52096 9 206 2.18E-48 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMIS_31760 cd094156c0590d7da799fd5180b37b08 103 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 4 100 6.4E-18 T 14-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 AMIS_31760 cd094156c0590d7da799fd5180b37b08 103 SUPERFAMILY SSF52091 5 100 1.75E-17 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_31760 cd094156c0590d7da799fd5180b37b08 103 Gene3D G3DSA:3.30.750.24 2 101 2.1E-21 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_31760 cd094156c0590d7da799fd5180b37b08 103 Pfam PF13466 STAS domain 17 95 5.7E-12 T 14-10-2018 IPR002645 STAS domain AMIS_10100 e5026f54c4efa97d38dc8387ba39c7fd 305 Pfam PF03707 Bacterial signalling protein N terminal repeat 122 169 1.3E-16 T 14-10-2018 IPR005330 MHYT domain AMIS_10100 e5026f54c4efa97d38dc8387ba39c7fd 305 Pfam PF03707 Bacterial signalling protein N terminal repeat 184 245 5.1E-7 T 14-10-2018 IPR005330 MHYT domain AMIS_10100 e5026f54c4efa97d38dc8387ba39c7fd 305 Pfam PF03707 Bacterial signalling protein N terminal repeat 58 104 6.1E-14 T 14-10-2018 IPR005330 MHYT domain AMIS_22870 1c86ebe7bcb9e30614ea923b62d69e04 896 Pfam PF05729 NACHT domain 241 401 6.4E-15 T 14-10-2018 IPR007111 NACHT nucleoside triphosphatase AMIS_22870 1c86ebe7bcb9e30614ea923b62d69e04 896 SMART SM00382 238 393 0.0036 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_22870 1c86ebe7bcb9e30614ea923b62d69e04 896 Gene3D G3DSA:3.40.50.300 213 370 2.4E-11 T 14-10-2018 AMIS_22870 1c86ebe7bcb9e30614ea923b62d69e04 896 SUPERFAMILY SSF52540 234 395 3.53E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_14070 5867b06a8afb5fc3d654e01ce231fc63 451 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 9 441 5.3E-57 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AMIS_14070 5867b06a8afb5fc3d654e01ce231fc63 451 Gene3D G3DSA:3.65.10.10 8 448 1.6E-133 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 AMIS_14070 5867b06a8afb5fc3d654e01ce231fc63 451 SUPERFAMILY SSF55205 5 450 8.83E-108 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 AMIS_14070 5867b06a8afb5fc3d654e01ce231fc63 451 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 5 450 2.9E-127 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMIS_14070 5867b06a8afb5fc3d654e01ce231fc63 451 Gene3D G3DSA:3.65.10.10 23 236 1.6E-133 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 AMIS_14070 5867b06a8afb5fc3d654e01ce231fc63 451 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 3 451 35.149 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMIS_29070 465caaa22c53a9638d7d86de793058f2 249 Pfam PF10099 Anti-sigma-K factor rskA 57 240 1.4E-27 T 14-10-2018 IPR018764 Anti-sigma K factor RskA GO:0005886|GO:0016021 AMIS_29070 465caaa22c53a9638d7d86de793058f2 249 Pfam PF13490 Putative zinc-finger 4 36 7.4E-8 T 14-10-2018 IPR027383 Putative zinc-finger AMIS_29070 465caaa22c53a9638d7d86de793058f2 249 Gene3D G3DSA:1.10.10.1320 2 71 2.6E-20 T 14-10-2018 AMIS_10770 b5e95b9956cfca78d79fc78d9de36257 451 Gene3D G3DSA:3.30.70.360 202 362 2.4E-117 T 14-10-2018 AMIS_10770 b5e95b9956cfca78d79fc78d9de36257 451 SUPERFAMILY SSF53187 7 445 9.43E-56 T 14-10-2018 AMIS_10770 b5e95b9956cfca78d79fc78d9de36257 451 Pfam PF01546 Peptidase family M20/M25/M40 85 441 1.2E-33 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 AMIS_10770 b5e95b9956cfca78d79fc78d9de36257 451 Gene3D G3DSA:3.40.630.10 22 432 2.4E-117 T 14-10-2018 AMIS_10770 b5e95b9956cfca78d79fc78d9de36257 451 Pfam PF07687 Peptidase dimerisation domain 195 343 3.6E-16 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain AMIS_67050 eb16a8173539cd4f6a2673c946c73965 216 Pfam PF11611 Domain of unknown function (DUF4352) 88 210 8.1E-28 T 14-10-2018 IPR029051 Domain of unknown function DUF4352 AMIS_67050 eb16a8173539cd4f6a2673c946c73965 216 Gene3D G3DSA:2.60.40.1240 79 203 8.0E-27 T 14-10-2018 IPR029050 Immunoprotective extracellular, immunoglobulin-like domain superfamily AMIS_60950 ed5f45ab55ecaeb4050c69ea6afc57db 395 Gene3D G3DSA:3.40.50.10240 184 259 1.6E-10 T 14-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 AMIS_60950 ed5f45ab55ecaeb4050c69ea6afc57db 395 SUPERFAMILY SSF63999 162 341 1.96E-29 T 14-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 AMIS_60950 ed5f45ab55ecaeb4050c69ea6afc57db 395 Pfam PF12555 Thiamine pyrophosphokinase C terminal 337 388 7.1E-17 T 14-10-2018 IPR022215 Thiamine pyrophosphokinase C-terminal AMIS_25410 6a729f5b796304de74483873e714c374 149 SUPERFAMILY SSF46785 8 132 1.96E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_25410 6a729f5b796304de74483873e714c374 149 Gene3D G3DSA:1.10.10.10 2 146 1.8E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_25410 6a729f5b796304de74483873e714c374 149 SMART SM00347 31 134 1.4E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_25410 6a729f5b796304de74483873e714c374 149 Pfam PF01047 MarR family 38 98 2.1E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_980 6597f7062561196f715e6e44dabe3d05 362 Pfam PF09335 SNARE associated Golgi protein 45 180 2.1E-19 T 14-10-2018 IPR032816 SNARE associated Golgi protein AMIS_15850 d1ad6245d442b67648765b558e410ffc 72 Pfam PF11160 Protein of unknown function (DUF2945) 11 70 2.2E-26 T 14-10-2018 IPR021331 Protein of unknown function DUF2945 AMIS_15850 d1ad6245d442b67648765b558e410ffc 72 Gene3D G3DSA:2.30.30.1060 3 72 4.6E-6 T 14-10-2018 AMIS_23790 49843ef001df7b2befa59c53edefc450 381 SMART SM00387 294 381 5.0E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_23790 49843ef001df7b2befa59c53edefc450 381 Gene3D G3DSA:3.30.565.10 262 381 9.6E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_23790 49843ef001df7b2befa59c53edefc450 381 SUPERFAMILY SSF55874 270 380 3.54E-15 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_23790 49843ef001df7b2befa59c53edefc450 381 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 299 380 1.3E-5 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_23790 49843ef001df7b2befa59c53edefc450 381 Pfam PF07730 Histidine kinase 195 258 1.9E-14 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMIS_65890 8d9ebd009429e18c0293629f534c615c 477 Gene3D G3DSA:3.40.190.10 42 472 9.0E-61 T 14-10-2018 AMIS_65890 8d9ebd009429e18c0293629f534c615c 477 Pfam PF01547 Bacterial extracellular solute-binding protein 75 361 2.2E-34 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein AMIS_65890 8d9ebd009429e18c0293629f534c615c 477 SUPERFAMILY SSF53850 41 472 2.94E-49 T 14-10-2018 AMIS_64250 e0b58da20a5dcf8581a3a0bca5cc6fe3 166 Pfam PF04306 Protein of unknown function (DUF456) 27 162 1.1E-27 T 14-10-2018 IPR007403 Protein of unknown function DUF456 AMIS_65590 e768c9b754a9528b894ccba664bf4ebc 258 Pfam PF03211 Pectate lyase 32 231 1.1E-82 T 14-10-2018 IPR004898 Pectate lyase PlyH/PlyE-like GO:0005576|GO:0030570 KEGG: 00040+4.2.2.2 AMIS_65590 e768c9b754a9528b894ccba664bf4ebc 258 Gene3D G3DSA:2.160.20.10 42 258 9.4E-78 T 14-10-2018 IPR012334 Pectin lyase fold AMIS_65590 e768c9b754a9528b894ccba664bf4ebc 258 SUPERFAMILY SSF51126 43 218 4.08E-56 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor AMIS_54170 5e0ce8ac9d39e12fbf627345e876bcde 333 Gene3D G3DSA:3.30.360.10 127 330 8.9E-34 T 14-10-2018 AMIS_54170 5e0ce8ac9d39e12fbf627345e876bcde 333 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 158 239 4.7E-8 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 AMIS_54170 5e0ce8ac9d39e12fbf627345e876bcde 333 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 11 127 4.1E-19 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AMIS_54170 5e0ce8ac9d39e12fbf627345e876bcde 333 SUPERFAMILY SSF55347 133 289 8.01E-17 T 14-10-2018 AMIS_54170 5e0ce8ac9d39e12fbf627345e876bcde 333 SUPERFAMILY SSF51735 10 141 3.76E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_54170 5e0ce8ac9d39e12fbf627345e876bcde 333 Gene3D G3DSA:3.40.50.720 7 126 6.7E-26 T 14-10-2018 AMIS_52790 42bf229d81356385a5ac487255f7f6bc 247 Gene3D G3DSA:1.10.3720.10 1 246 3.6E-32 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_52790 42bf229d81356385a5ac487255f7f6bc 247 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 68 235 2.2E-11 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_52790 42bf229d81356385a5ac487255f7f6bc 247 SUPERFAMILY SSF161098 2 234 9.59E-33 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_62780 f4acb18ef23c99d6b3254b4f3581baee 638 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 389 600 1.2E-50 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMIS_62780 f4acb18ef23c99d6b3254b4f3581baee 638 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 47 607 7.1E-92 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AMIS_62780 f4acb18ef23c99d6b3254b4f3581baee 638 Gene3D G3DSA:3.30.70.3400 47 131 3.1E-18 T 14-10-2018 AMIS_62780 f4acb18ef23c99d6b3254b4f3581baee 638 Gene3D G3DSA:1.20.1640.10 431 616 2.4E-5 T 14-10-2018 AMIS_62780 f4acb18ef23c99d6b3254b4f3581baee 638 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 623 36.63 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AMIS_62780 f4acb18ef23c99d6b3254b4f3581baee 638 SUPERFAMILY SSF82866 414 612 1.57E-33 T 14-10-2018 AMIS_62780 f4acb18ef23c99d6b3254b4f3581baee 638 Pfam PF02355 Protein export membrane protein 437 611 7.3E-9 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AMIS_62780 f4acb18ef23c99d6b3254b4f3581baee 638 Gene3D G3DSA:3.30.1360.200 293 430 8.0E-23 T 14-10-2018 AMIS_22390 072aaf8438b60d39b92bfa773a9a5cec 302 SUPERFAMILY SSF103481 49 147 1.57E-14 T 14-10-2018 AMIS_22390 072aaf8438b60d39b92bfa773a9a5cec 302 Pfam PF00892 EamA-like transporter family 16 145 1.1E-19 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMIS_22390 072aaf8438b60d39b92bfa773a9a5cec 302 Pfam PF00892 EamA-like transporter family 158 290 4.0E-24 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMIS_22390 072aaf8438b60d39b92bfa773a9a5cec 302 SUPERFAMILY SSF103481 196 291 7.72E-13 T 14-10-2018 AMIS_53450 27e4f9982ac5234c1430a851de04f623 245 SUPERFAMILY SSF56784 19 225 2.99E-33 T 14-10-2018 IPR036412 HAD-like superfamily AMIS_53450 27e4f9982ac5234c1430a851de04f623 245 Pfam PF13419 Haloacid dehalogenase-like hydrolase 22 222 4.4E-16 T 14-10-2018 AMIS_53450 27e4f9982ac5234c1430a851de04f623 245 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 142 213 4.2E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMIS_53450 27e4f9982ac5234c1430a851de04f623 245 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 115 218 1.6E-10 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMIS_53450 27e4f9982ac5234c1430a851de04f623 245 Gene3D G3DSA:3.40.50.1000 17 233 2.5E-32 T 14-10-2018 IPR023214 HAD superfamily AMIS_57230 7d013bb807b8ba52a76d6a91ac409169 93 Gene3D G3DSA:3.30.70.100 1 91 3.9E-21 T 14-10-2018 AMIS_57230 7d013bb807b8ba52a76d6a91ac409169 93 SUPERFAMILY SSF54909 1 91 1.03E-19 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel AMIS_57230 7d013bb807b8ba52a76d6a91ac409169 93 SMART SM00886 1 92 9.2E-21 T 14-10-2018 IPR013097 Stress responsive alpha-beta barrel AMIS_57230 7d013bb807b8ba52a76d6a91ac409169 93 Pfam PF07876 Stress responsive A/B Barrel Domain 2 91 5.3E-17 T 14-10-2018 IPR013097 Stress responsive alpha-beta barrel AMIS_47500 f750e03e25f682dbd6f9d380a58db435 334 Gene3D G3DSA:3.20.20.100 1 331 1.4E-123 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMIS_47500 f750e03e25f682dbd6f9d380a58db435 334 Pfam PF00248 Aldo/keto reductase family 15 315 9.4E-76 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain AMIS_47500 f750e03e25f682dbd6f9d380a58db435 334 SUPERFAMILY SSF51430 1 315 1.22E-104 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMIS_47500 f750e03e25f682dbd6f9d380a58db435 334 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 135 152 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AMIS_47500 f750e03e25f682dbd6f9d380a58db435 334 PRINTS PR00069 Aldo-keto reductase signature 104 122 1.0E-6 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMIS_47500 f750e03e25f682dbd6f9d380a58db435 334 PRINTS PR00069 Aldo-keto reductase signature 135 152 1.0E-6 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMIS_51530 d6273c8ddf751f819f060c7ffa0db1e8 177 Pfam PF05995 Cysteine dioxygenase type I 32 151 1.0E-17 T 14-10-2018 IPR010300 Cysteine dioxygenase type I GO:0005506|GO:0016702|GO:0055114 KEGG: 00270+1.13.11.20|KEGG: 00430+1.13.11.20|MetaCyc: PWY-5331|Reactome: R-HSA-1614558 AMIS_51530 d6273c8ddf751f819f060c7ffa0db1e8 177 SUPERFAMILY SSF51182 20 159 9.4E-29 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily AMIS_51530 d6273c8ddf751f819f060c7ffa0db1e8 177 Gene3D G3DSA:2.60.120.10 20 154 2.3E-18 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMIS_15060 d6e45b05a9b8d057874d6ec4189a52d4 129 Pfam PF11239 Protein of unknown function (DUF3040) 1 79 1.9E-25 T 14-10-2018 IPR021401 Protein of unknown function DUF3040 AMIS_17300 937cee74d3276d28652bf06b994f093e 277 Pfam PF00535 Glycosyl transferase family 2 31 172 1.3E-19 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AMIS_17300 937cee74d3276d28652bf06b994f093e 277 Gene3D G3DSA:3.90.550.10 21 247 1.0E-27 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_17300 937cee74d3276d28652bf06b994f093e 277 SUPERFAMILY SSF53448 24 264 1.13E-32 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_42500 5cdffa4cee6744580675cfbc619a1f4d 136 PRINTS PR00598 Bacterial regulatory protein MarR family signature 85 101 3.2E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_42500 5cdffa4cee6744580675cfbc619a1f4d 136 PRINTS PR00598 Bacterial regulatory protein MarR family signature 49 65 3.2E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_42500 5cdffa4cee6744580675cfbc619a1f4d 136 PRINTS PR00598 Bacterial regulatory protein MarR family signature 66 81 3.2E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_42500 5cdffa4cee6744580675cfbc619a1f4d 136 Pfam PF12802 MarR family 32 89 3.0E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_42500 5cdffa4cee6744580675cfbc619a1f4d 136 Gene3D G3DSA:1.10.10.10 6 132 1.9E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_42500 5cdffa4cee6744580675cfbc619a1f4d 136 SUPERFAMILY SSF46785 8 116 4.26E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_42500 5cdffa4cee6744580675cfbc619a1f4d 136 SMART SM00347 26 120 3.7E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_78270 fc5af66f2e0eda4fca345cd34160f12c 316 Gene3D G3DSA:3.40.50.300 5 316 1.7E-45 T 14-10-2018 AMIS_78270 fc5af66f2e0eda4fca345cd34160f12c 316 Pfam PF02374 Anion-transporting ATPase 13 167 3.6E-17 T 14-10-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 AMIS_78270 fc5af66f2e0eda4fca345cd34160f12c 316 SUPERFAMILY SSF52540 10 231 1.43E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_16080 dcfb68b6e1715e17b921d0d54987ca7a 335 Gene3D G3DSA:3.40.50.12300 4 332 3.9E-84 T 14-10-2018 IPR038136 Gluconeogenesis factor superfamily AMIS_16080 dcfb68b6e1715e17b921d0d54987ca7a 335 SUPERFAMILY SSF142338 7 327 1.96E-73 T 14-10-2018 AMIS_16080 dcfb68b6e1715e17b921d0d54987ca7a 335 Pfam PF01933 Uncharacterised protein family UPF0052 9 285 5.3E-60 T 14-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 AMIS_16080 dcfb68b6e1715e17b921d0d54987ca7a 335 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 9 286 4.3E-69 T 14-10-2018 IPR010119 Gluconeogenesis factor AMIS_16080 dcfb68b6e1715e17b921d0d54987ca7a 335 Hamap MF_00973 Gluconeogenesis factor. 5 333 30.447 T 14-10-2018 IPR010119 Gluconeogenesis factor AMIS_51540 3108bf456b82ae36286efafd8b06283e 306 Gene3D G3DSA:3.20.20.140 8 302 1.7E-28 T 14-10-2018 AMIS_51540 3108bf456b82ae36286efafd8b06283e 306 SUPERFAMILY SSF51556 11 301 1.06E-26 T 14-10-2018 IPR032466 Metal-dependent hydrolase AMIS_4690 a50d69e1b6917df952a20d50f86b4b49 254 SMART SM00382 29 234 6.6E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_4690 a50d69e1b6917df952a20d50f86b4b49 254 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_4690 a50d69e1b6917df952a20d50f86b4b49 254 Pfam PF00005 ABC transporter 22 178 1.0E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_4690 a50d69e1b6917df952a20d50f86b4b49 254 Gene3D G3DSA:3.40.50.300 1 244 2.7E-54 T 14-10-2018 AMIS_4690 a50d69e1b6917df952a20d50f86b4b49 254 SUPERFAMILY SSF52540 3 235 2.13E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_79160 43e4450e40812eceb7aa6336053aa419 382 Gene3D G3DSA:3.40.50.720 2 141 1.6E-33 T 14-10-2018 AMIS_79160 43e4450e40812eceb7aa6336053aa419 382 SUPERFAMILY SSF51735 50 174 4.69E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_79160 43e4450e40812eceb7aa6336053aa419 382 SUPERFAMILY SSF55347 147 347 1.96E-31 T 14-10-2018 AMIS_79160 43e4450e40812eceb7aa6336053aa419 382 Gene3D G3DSA:3.30.360.10 142 380 9.2E-69 T 14-10-2018 AMIS_79160 43e4450e40812eceb7aa6336053aa419 382 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 10 135 5.1E-9 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AMIS_21620 506d9067fce193e4da979c15049061b3 377 Pfam PF13469 Sulfotransferase family 88 330 1.6E-57 T 14-10-2018 AMIS_21620 506d9067fce193e4da979c15049061b3 377 SUPERFAMILY SSF52540 75 352 1.75E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_21620 506d9067fce193e4da979c15049061b3 377 Gene3D G3DSA:3.40.50.300 2 374 3.7E-136 T 14-10-2018 AMIS_60050 f2d0bdfffd0b2ab4bd72e24154c2aaa4 404 SUPERFAMILY SSF81606 185 387 8.89E-13 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_60050 f2d0bdfffd0b2ab4bd72e24154c2aaa4 404 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 197 387 1.3E-45 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_60050 f2d0bdfffd0b2ab4bd72e24154c2aaa4 404 SMART SM00331 171 387 7.4E-31 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_60050 f2d0bdfffd0b2ab4bd72e24154c2aaa4 404 Gene3D G3DSA:3.60.40.10 169 397 8.4E-53 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_46030 6292cc782bb6fd00f4d9b96cb7e90535 374 SUPERFAMILY SSF52200 29 102 4.71E-5 T 14-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily AMIS_46030 6292cc782bb6fd00f4d9b96cb7e90535 374 Gene3D G3DSA:3.40.50.10140 2 123 1.1E-9 T 14-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily AMIS_65070 44a8bcd020d4b09b65417c6f32e30ec1 648 Gene3D G3DSA:3.60.21.10 144 446 2.2E-25 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like AMIS_65070 44a8bcd020d4b09b65417c6f32e30ec1 648 SUPERFAMILY SSF56300 146 402 6.33E-32 T 14-10-2018 AMIS_65070 44a8bcd020d4b09b65417c6f32e30ec1 648 SUPERFAMILY SSF49363 35 137 3.66E-11 T 14-10-2018 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 AMIS_65070 44a8bcd020d4b09b65417c6f32e30ec1 648 Pfam PF00149 Calcineurin-like phosphoesterase 146 352 1.1E-12 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AMIS_65070 44a8bcd020d4b09b65417c6f32e30ec1 648 Pfam PF16656 Purple acid Phosphatase, N-terminal domain 44 137 5.8E-16 T 14-10-2018 IPR015914 Purple acid phosphatase, N-terminal GO:0003993|GO:0046872 AMIS_65070 44a8bcd020d4b09b65417c6f32e30ec1 648 Gene3D G3DSA:2.60.40.380 44 139 3.8E-6 T 14-10-2018 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 AMIS_27070 ef1e11fca334146320ce2af811be348c 408 Gene3D G3DSA:1.20.1250.20 12 390 2.8E-42 T 14-10-2018 AMIS_27070 ef1e11fca334146320ce2af811be348c 408 SUPERFAMILY SSF103473 13 395 1.7E-52 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_27070 ef1e11fca334146320ce2af811be348c 408 Pfam PF07690 Major Facilitator Superfamily 18 297 2.6E-28 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_52120 a274201f76b90c3e5abb0b9e45c0da67 75 Pfam PF13275 S4 domain 11 73 3.5E-27 T 14-10-2018 AMIS_52120 a274201f76b90c3e5abb0b9e45c0da67 75 SUPERFAMILY SSF55174 6 73 5.1E-21 T 14-10-2018 AMIS_52120 a274201f76b90c3e5abb0b9e45c0da67 75 Gene3D G3DSA:3.10.290.10 4 74 1.5E-25 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AMIS_81140 c27a84f778f9f8617050d34770b269da 219 Gene3D G3DSA:3.40.630.30 26 216 2.3E-8 T 14-10-2018 AMIS_81140 c27a84f778f9f8617050d34770b269da 219 SUPERFAMILY SSF55729 1 176 6.26E-10 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_2330 9b82b778d1bd7de63c05f333c1e56969 79 Pfam PF16945 Putative lactococcus lactis phage r1t holin 4 73 1.1E-30 T 14-10-2018 IPR020109 Holin, r1t-type AMIS_2330 9b82b778d1bd7de63c05f333c1e56969 79 ProDom PD057201 GP34 TRANSMEMBRANE MEMBRANE GP4 GP37 PHAGE LYSIS HOLIN 4 66 0.006 T 14-10-2018 IPR020109 Holin, r1t-type AMIS_17470 8de7069b6f2d0cf32736cac117708131 276 Pfam PF02669 K+-transporting ATPase, c chain 12 90 1.4E-12 T 14-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 AMIS_17470 8de7069b6f2d0cf32736cac117708131 276 Pfam PF02669 K+-transporting ATPase, c chain 194 267 1.1E-32 T 14-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 AMIS_17470 8de7069b6f2d0cf32736cac117708131 276 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 7 268 24.852 T 14-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 AMIS_4930 ae00a257db6b974ee82b21248545584e 202 Gene3D G3DSA:3.40.630.30 3 179 3.1E-33 T 14-10-2018 AMIS_4930 ae00a257db6b974ee82b21248545584e 202 Pfam PF13302 Acetyltransferase (GNAT) domain 17 154 7.4E-25 T 14-10-2018 IPR000182 GNAT domain AMIS_4930 ae00a257db6b974ee82b21248545584e 202 SUPERFAMILY SSF55729 8 159 1.66E-34 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_40980 57e1de35fd2aa0c8c65e05f54bc3528e 190 TIGRFAM TIGR03083 TIGR03083: uncharacterized Actinobacterial protein TIGR03083 13 182 7.6E-20 T 14-10-2018 IPR017517 Conserved hypothetical protein CHP03083, actinobacterial-type AMIS_40980 57e1de35fd2aa0c8c65e05f54bc3528e 190 Pfam PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain 15 126 1.2E-10 T 14-10-2018 IPR024344 Mycothiol-dependent maleylpyruvate isomerase, metal-binding domain GO:0046872 AMIS_40980 57e1de35fd2aa0c8c65e05f54bc3528e 190 SUPERFAMILY SSF109854 6 131 4.27E-13 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes AMIS_40980 57e1de35fd2aa0c8c65e05f54bc3528e 190 TIGRFAM TIGR03086 TIGR03086: TIGR03086 family protein 11 182 6.1E-38 T 14-10-2018 IPR017520 Conserved hypothetical protein CHP03086 AMIS_40980 57e1de35fd2aa0c8c65e05f54bc3528e 190 Gene3D G3DSA:1.20.120.450 3 130 6.4E-6 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes AMIS_8920 33c28f002f83fc39a07cd62ef1166e1f 311 SUPERFAMILY SSF50129 2 147 9.89E-28 T 14-10-2018 IPR011032 GroES-like superfamily AMIS_8920 33c28f002f83fc39a07cd62ef1166e1f 311 Gene3D G3DSA:3.40.50.720 122 254 4.6E-75 T 14-10-2018 AMIS_8920 33c28f002f83fc39a07cd62ef1166e1f 311 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 86 2.3E-8 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMIS_8920 33c28f002f83fc39a07cd62ef1166e1f 311 SUPERFAMILY SSF51735 113 267 3.05E-29 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_8920 33c28f002f83fc39a07cd62ef1166e1f 311 Gene3D G3DSA:3.90.180.10 9 308 4.6E-75 T 14-10-2018 AMIS_8920 33c28f002f83fc39a07cd62ef1166e1f 311 Pfam PF00107 Zinc-binding dehydrogenase 150 253 7.4E-19 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMIS_8920 33c28f002f83fc39a07cd62ef1166e1f 311 SMART SM00829 10 309 9.2E-13 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMIS_54650 39b3f7e69b44c28b1f13cf225afa6d50 89 SUPERFAMILY SSF143011 2 85 9.81E-19 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily AMIS_54650 39b3f7e69b44c28b1f13cf225afa6d50 89 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 5 86 9.3E-28 T 14-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 AMIS_54650 39b3f7e69b44c28b1f13cf225afa6d50 89 TIGRFAM TIGR02116 toxin_Txe_YoeB: addiction module toxin, Txe/YoeB family 5 86 2.0E-24 T 14-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 AMIS_54650 39b3f7e69b44c28b1f13cf225afa6d50 89 Gene3D G3DSA:3.30.2310.20 1 86 1.3E-30 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily AMIS_49460 dc827ef9d313238581ab62562ecc6bd5 461 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 6 441 1.5E-173 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AMIS_49460 dc827ef9d313238581ab62562ecc6bd5 461 PIRSF PIRSF006446 1 458 3.7E-155 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AMIS_21610 f904415800e2a7557997f5c416e449f6 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 249 4.0E-48 T 14-10-2018 AMIS_21610 f904415800e2a7557997f5c416e449f6 253 SUPERFAMILY SSF51735 4 250 4.38E-64 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_21610 f904415800e2a7557997f5c416e449f6 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 1.3E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_21610 f904415800e2a7557997f5c416e449f6 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 168 1.3E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_21610 f904415800e2a7557997f5c416e449f6 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 1.3E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_21610 f904415800e2a7557997f5c416e449f6 253 Gene3D G3DSA:3.40.50.720 1 252 7.0E-66 T 14-10-2018 AMIS_21610 f904415800e2a7557997f5c416e449f6 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 5.4E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_21610 f904415800e2a7557997f5c416e449f6 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 5.4E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_21610 f904415800e2a7557997f5c416e449f6 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 5.4E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_21610 f904415800e2a7557997f5c416e449f6 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 5.4E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_21610 f904415800e2a7557997f5c416e449f6 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 5.4E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_21610 f904415800e2a7557997f5c416e449f6 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 5.4E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_28010 33df525eb8bff9610484b38e097dbbc6 136 Gene3D G3DSA:1.10.10.10 9 133 1.4E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_28010 33df525eb8bff9610484b38e097dbbc6 136 Pfam PF01638 HxlR-like helix-turn-helix 36 121 2.0E-24 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type AMIS_28010 33df525eb8bff9610484b38e097dbbc6 136 SUPERFAMILY SSF46785 24 130 5.82E-27 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_43840 d3f587c137b22020561e6bd83ac98280 143 Gene3D G3DSA:3.40.50.620 2 143 1.3E-41 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMIS_43840 d3f587c137b22020561e6bd83ac98280 143 SUPERFAMILY SSF52402 4 143 1.26E-33 T 14-10-2018 AMIS_43840 d3f587c137b22020561e6bd83ac98280 143 PRINTS PR01438 Universal stress protein signature 121 143 3.3E-17 T 14-10-2018 IPR006015 Universal stress protein A AMIS_43840 d3f587c137b22020561e6bd83ac98280 143 PRINTS PR01438 Universal stress protein signature 103 115 3.3E-17 T 14-10-2018 IPR006015 Universal stress protein A AMIS_43840 d3f587c137b22020561e6bd83ac98280 143 PRINTS PR01438 Universal stress protein signature 4 22 3.3E-17 T 14-10-2018 IPR006015 Universal stress protein A AMIS_43840 d3f587c137b22020561e6bd83ac98280 143 Pfam PF00582 Universal stress protein family 4 143 4.2E-32 T 14-10-2018 IPR006016 UspA AMIS_47440 f9dc9d80e28a3378803311e2bc8dc094 244 Gene3D G3DSA:3.40.50.1820 4 241 2.4E-43 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_47440 f9dc9d80e28a3378803311e2bc8dc094 244 SUPERFAMILY SSF53474 5 240 1.9E-42 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_47440 f9dc9d80e28a3378803311e2bc8dc094 244 Pfam PF01738 Dienelactone hydrolase family 17 241 2.9E-29 T 14-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 AMIS_14340 36dbb05de7b0c5bd561f7986d4bef52a 634 SMART SM00382 412 603 9.3E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_14340 36dbb05de7b0c5bd561f7986d4bef52a 634 SUPERFAMILY SSF90123 52 350 9.94E-14 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMIS_14340 36dbb05de7b0c5bd561f7986d4bef52a 634 Gene3D G3DSA:3.40.50.300 381 633 1.4E-80 T 14-10-2018 AMIS_14340 36dbb05de7b0c5bd561f7986d4bef52a 634 Pfam PF00005 ABC transporter 404 557 4.5E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_14340 36dbb05de7b0c5bd561f7986d4bef52a 634 SUPERFAMILY SSF52540 381 627 2.57E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_14340 36dbb05de7b0c5bd561f7986d4bef52a 634 ProSitePatterns PS00211 ABC transporters family signature. 529 543 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_6690 8e5b09b80fe553e7d2411b69b90243a8 227 SMART SM00987 52 211 4.4E-33 T 14-10-2018 AMIS_6690 8e5b09b80fe553e7d2411b69b90243a8 227 Gene3D G3DSA:3.40.470.10 1 226 2.0E-87 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMIS_6690 8e5b09b80fe553e7d2411b69b90243a8 227 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 9 213 2.7E-74 T 14-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMIS_6690 8e5b09b80fe553e7d2411b69b90243a8 227 SUPERFAMILY SSF52141 6 221 2.83E-80 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMIS_6690 8e5b09b80fe553e7d2411b69b90243a8 227 Pfam PF03167 Uracil DNA glycosylase superfamily 55 209 7.9E-22 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMIS_6690 8e5b09b80fe553e7d2411b69b90243a8 227 SMART SM00986 52 211 4.4E-33 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMIS_6690 8e5b09b80fe553e7d2411b69b90243a8 227 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 8 222 37.477 T 14-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMIS_6690 8e5b09b80fe553e7d2411b69b90243a8 227 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 60 69 - T 14-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMIS_59670 e007b9c84bcf987deda12efc1b364251 278 Gene3D G3DSA:3.40.50.1820 27 276 9.8E-54 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_59670 e007b9c84bcf987deda12efc1b364251 278 Pfam PF07859 alpha/beta hydrolase fold 66 255 3.9E-30 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 AMIS_59670 e007b9c84bcf987deda12efc1b364251 278 SUPERFAMILY SSF53474 60 273 8.51E-38 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_62590 facddc5536a8f5fbcc2c8974a2a276cb 215 Hamap MF_01385 Urease accessory protein UreF [ureF]. 2 215 19.303 T 14-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 AMIS_62590 facddc5536a8f5fbcc2c8974a2a276cb 215 Gene3D G3DSA:1.10.4190.10 2 187 8.5E-27 T 14-10-2018 IPR038277 UreF domain superfamily AMIS_62590 facddc5536a8f5fbcc2c8974a2a276cb 215 PIRSF PIRSF009467 1 215 8.7E-44 T 14-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 AMIS_62590 facddc5536a8f5fbcc2c8974a2a276cb 215 Pfam PF01730 UreF 40 168 3.1E-23 T 14-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 AMIS_80160 9b8c9f0b7281622064847fbbe1ea55c6 243 SUPERFAMILY SSF53448 1 238 3.15E-34 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_80160 9b8c9f0b7281622064847fbbe1ea55c6 243 Gene3D G3DSA:3.90.550.10 1 241 7.4E-42 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_80160 9b8c9f0b7281622064847fbbe1ea55c6 243 Pfam PF00483 Nucleotidyl transferase 3 112 1.4E-12 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AMIS_7130 497258820d6fb62ade96ebd81f8a923c 312 Pfam PF01551 Peptidase family M23 199 292 9.3E-33 T 14-10-2018 IPR016047 Peptidase M23 AMIS_7130 497258820d6fb62ade96ebd81f8a923c 312 SUPERFAMILY SSF51261 165 298 2.77E-46 T 14-10-2018 IPR011055 Duplicated hybrid motif AMIS_7130 497258820d6fb62ade96ebd81f8a923c 312 Gene3D G3DSA:2.70.70.10 135 302 6.5E-43 T 14-10-2018 IPR011055 Duplicated hybrid motif AMIS_58780 fca8005db6aaf67cda0e8aa30393ee31 396 Gene3D G3DSA:3.30.70.2330 35 114 1.7E-5 T 14-10-2018 AMIS_58780 fca8005db6aaf67cda0e8aa30393ee31 396 Pfam PF08797 HIRAN domain 15 87 1.1E-6 T 14-10-2018 IPR014905 HIRAN domain GO:0003676|GO:0008270|GO:0016818 Reactome: R-HSA-8866654 AMIS_76930 23f62910b43628cf2ca21826d936197e 238 Gene3D G3DSA:3.40.50.2300 1 116 2.6E-40 T 14-10-2018 AMIS_76930 23f62910b43628cf2ca21826d936197e 238 SMART SM00862 145 219 4.9E-29 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_76930 23f62910b43628cf2ca21826d936197e 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 219 1.4E-28 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_76930 23f62910b43628cf2ca21826d936197e 238 SUPERFAMILY SSF46894 124 221 1.42E-30 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_76930 23f62910b43628cf2ca21826d936197e 238 Gene3D G3DSA:1.10.10.10 117 222 2.3E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_75720 7548da880c73cbb53008092f5d23bf46 336 SUPERFAMILY SSF52518 18 333 3.13E-82 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold AMIS_75720 7548da880c73cbb53008092f5d23bf46 336 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 55 202 1.7E-30 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AMIS_75720 7548da880c73cbb53008092f5d23bf46 336 Gene3D G3DSA:3.40.50.970 80 222 3.2E-27 T 14-10-2018 AMIS_8370 c643b33de88047399446d6e85993e17e 357 PIRSF PIRSF015921 9 357 5.1E-75 T 14-10-2018 IPR012171 Fatty acid desaturase GO:0006629|GO:0016021|GO:0016491 AMIS_8370 c643b33de88047399446d6e85993e17e 357 Pfam PF00487 Fatty acid desaturase 76 331 1.9E-39 T 14-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 AMIS_59490 b37448f4c2f6b5be6a0bd32638f71dbf 105 SUPERFAMILY SSF54909 6 96 4.29E-15 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel AMIS_59490 b37448f4c2f6b5be6a0bd32638f71dbf 105 Pfam PF03992 Antibiotic biosynthesis monooxygenase 6 78 1.5E-12 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain AMIS_59490 b37448f4c2f6b5be6a0bd32638f71dbf 105 Gene3D G3DSA:3.30.70.100 6 103 6.5E-15 T 14-10-2018 AMIS_69100 9e8cf336c4c582f27c5233ea25c45e3f 308 Gene3D G3DSA:1.10.10.10 184 229 3.3E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_69100 9e8cf336c4c582f27c5233ea25c45e3f 308 Hamap MF_01114 Regulatory protein RecX [recX]. 126 284 14.49 T 14-10-2018 IPR003783 Regulatory protein RecX GO:0006282 AMIS_69100 9e8cf336c4c582f27c5233ea25c45e3f 308 Pfam PF02631 RecX family 160 279 7.0E-26 T 14-10-2018 IPR003783 Regulatory protein RecX GO:0006282 AMIS_36180 0e933f48f3976b3596d8f218e7b508b5 222 Pfam PF00583 Acetyltransferase (GNAT) family 29 114 5.5E-6 T 14-10-2018 IPR000182 GNAT domain AMIS_36180 0e933f48f3976b3596d8f218e7b508b5 222 SUPERFAMILY SSF55729 1 119 6.13E-13 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_36180 0e933f48f3976b3596d8f218e7b508b5 222 Gene3D G3DSA:3.40.630.30 3 153 3.2E-11 T 14-10-2018 AMIS_39960 503998f5d6e9e24fe94ec25940bc35eb 221 Gene3D G3DSA:2.70.70.10 45 205 6.9E-20 T 14-10-2018 IPR011055 Duplicated hybrid motif AMIS_39960 503998f5d6e9e24fe94ec25940bc35eb 221 SUPERFAMILY SSF51261 69 172 1.36E-15 T 14-10-2018 IPR011055 Duplicated hybrid motif AMIS_39960 503998f5d6e9e24fe94ec25940bc35eb 221 Pfam PF01551 Peptidase family M23 76 175 1.3E-14 T 14-10-2018 IPR016047 Peptidase M23 AMIS_50830 53c6c5b3585646fb8a4a8d9474f7c4d0 282 SUPERFAMILY SSF53474 3 278 1.05E-57 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_50830 53c6c5b3585646fb8a4a8d9474f7c4d0 282 PRINTS PR00111 Alpha/beta hydrolase fold signature 227 241 2.9E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_50830 53c6c5b3585646fb8a4a8d9474f7c4d0 282 PRINTS PR00111 Alpha/beta hydrolase fold signature 99 112 2.9E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_50830 53c6c5b3585646fb8a4a8d9474f7c4d0 282 PRINTS PR00111 Alpha/beta hydrolase fold signature 113 126 2.9E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_50830 53c6c5b3585646fb8a4a8d9474f7c4d0 282 Gene3D G3DSA:3.40.50.1820 3 282 7.9E-61 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_50830 53c6c5b3585646fb8a4a8d9474f7c4d0 282 Pfam PF00561 alpha/beta hydrolase fold 25 264 2.1E-16 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_45050 d2677bd84c15583e3b8fa725769f44ac 225 Gene3D G3DSA:3.40.50.150 18 207 2.7E-21 T 14-10-2018 AMIS_45050 d2677bd84c15583e3b8fa725769f44ac 225 Pfam PF13578 Methyltransferase domain 57 185 2.6E-19 T 14-10-2018 AMIS_45050 d2677bd84c15583e3b8fa725769f44ac 225 SUPERFAMILY SSF53335 36 206 2.26E-16 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_56380 311fc29caf8afe886bc7ab8a48763029 493 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 81 237 1.8E-13 T 14-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like AMIS_68690 d661904984f6e900eeed34302f242527 123 SUPERFAMILY SSF52172 1 120 2.28E-35 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_68690 d661904984f6e900eeed34302f242527 123 SMART SM00448 2 116 2.1E-36 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_68690 d661904984f6e900eeed34302f242527 123 Gene3D G3DSA:3.40.50.12740 2 123 4.5E-36 T 14-10-2018 AMIS_68690 d661904984f6e900eeed34302f242527 123 Pfam PF00072 Response regulator receiver domain 4 116 7.4E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_10870 80d6e7baafd227d4dd9d3f8c59398900 350 Gene3D G3DSA:1.10.1610.10 10 338 4.8E-131 T 14-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 AMIS_10870 80d6e7baafd227d4dd9d3f8c59398900 350 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 12 349 35.837 T 14-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 AMIS_10870 80d6e7baafd227d4dd9d3f8c59398900 350 Pfam PF02277 Phosphoribosyltransferase 10 347 3.9E-129 T 14-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 AMIS_10870 80d6e7baafd227d4dd9d3f8c59398900 350 SUPERFAMILY SSF52733 4 348 5.1E-115 T 14-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 AMIS_10870 80d6e7baafd227d4dd9d3f8c59398900 350 Gene3D G3DSA:3.40.50.10210 57 330 4.8E-131 T 14-10-2018 AMIS_10870 80d6e7baafd227d4dd9d3f8c59398900 350 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 14 347 1.2E-127 T 14-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 AMIS_36560 018201810b52b85afddc358a4413d171 258 Pfam PF00583 Acetyltransferase (GNAT) family 19 99 2.3E-5 T 14-10-2018 IPR000182 GNAT domain AMIS_36560 018201810b52b85afddc358a4413d171 258 Gene3D G3DSA:3.40.630.30 3 254 1.5E-11 T 14-10-2018 AMIS_36560 018201810b52b85afddc358a4413d171 258 SUPERFAMILY SSF55729 3 121 3.26E-14 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_50040 7dfaaa680e4d48548b26f9c168672649 469 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 6 450 5.5E-139 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AMIS_50040 7dfaaa680e4d48548b26f9c168672649 469 PIRSF PIRSF006446 1 467 6.0E-114 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AMIS_28540 70a8a50ccdd984400b6720b98cffd168 288 Pfam PF00248 Aldo/keto reductase family 21 285 7.5E-44 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain AMIS_28540 70a8a50ccdd984400b6720b98cffd168 288 SUPERFAMILY SSF51430 14 285 7.33E-65 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMIS_28540 70a8a50ccdd984400b6720b98cffd168 288 PRINTS PR00069 Aldo-keto reductase signature 114 132 2.2E-8 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMIS_28540 70a8a50ccdd984400b6720b98cffd168 288 PRINTS PR00069 Aldo-keto reductase signature 219 243 2.2E-8 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMIS_28540 70a8a50ccdd984400b6720b98cffd168 288 PRINTS PR00069 Aldo-keto reductase signature 49 73 2.2E-8 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMIS_28540 70a8a50ccdd984400b6720b98cffd168 288 PRINTS PR00069 Aldo-keto reductase signature 149 166 2.2E-8 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMIS_28540 70a8a50ccdd984400b6720b98cffd168 288 Gene3D G3DSA:3.20.20.100 10 287 2.1E-67 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMIS_55730 c966a2ab904b6965611534350cb7005d 345 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 37 341 2.4E-74 T 14-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 AMIS_55730 c966a2ab904b6965611534350cb7005d 345 Gene3D G3DSA:3.40.190.10 116 289 7.9E-97 T 14-10-2018 AMIS_55730 c966a2ab904b6965611534350cb7005d 345 Pfam PF12849 PBP superfamily domain 27 313 5.6E-53 T 14-10-2018 IPR024370 PBP domain AMIS_55730 c966a2ab904b6965611534350cb7005d 345 SUPERFAMILY SSF53850 37 344 1.36E-72 T 14-10-2018 AMIS_55730 c966a2ab904b6965611534350cb7005d 345 Gene3D G3DSA:3.40.190.10 39 331 7.9E-97 T 14-10-2018 AMIS_55730 c966a2ab904b6965611534350cb7005d 345 PIRSF PIRSF002756 2 345 2.7E-103 T 14-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 AMIS_68840 aadeb2e17ea2865318f666e6f41b2f4e 393 Gene3D G3DSA:3.40.800.20 6 342 7.4E-102 T 14-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AMIS_68840 aadeb2e17ea2865318f666e6f41b2f4e 393 PRINTS PR01270 Histone deacetylase superfamily signature 128 151 2.8E-19 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AMIS_68840 aadeb2e17ea2865318f666e6f41b2f4e 393 PRINTS PR01270 Histone deacetylase superfamily signature 247 257 2.8E-19 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AMIS_68840 aadeb2e17ea2865318f666e6f41b2f4e 393 PRINTS PR01270 Histone deacetylase superfamily signature 161 176 2.8E-19 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AMIS_68840 aadeb2e17ea2865318f666e6f41b2f4e 393 SUPERFAMILY SSF52768 4 333 7.67E-104 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily AMIS_68840 aadeb2e17ea2865318f666e6f41b2f4e 393 Pfam PF00850 Histone deacetylase domain 22 316 3.9E-75 T 14-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AMIS_69960 8f24cc63d250fc67e05dc8a79fdbfa2c 419 Gene3D G3DSA:2.30.42.10 130 235 1.5E-12 T 14-10-2018 AMIS_69960 8f24cc63d250fc67e05dc8a79fdbfa2c 419 Pfam PF02163 Peptidase family M50 9 368 5.1E-45 T 14-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 AMIS_69960 8f24cc63d250fc67e05dc8a79fdbfa2c 419 Pfam PF13180 PDZ domain 171 227 7.9E-10 T 14-10-2018 IPR001478 PDZ domain GO:0005515 AMIS_69960 8f24cc63d250fc67e05dc8a79fdbfa2c 419 SUPERFAMILY SSF50156 171 226 1.46E-10 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 AMIS_45820 4d91691cbd183a294f477bb7b0ee62b4 287 SUPERFAMILY SSF53213 2 266 2.49E-49 T 14-10-2018 AMIS_45820 4d91691cbd183a294f477bb7b0ee62b4 287 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 9 258 2.2E-24 T 14-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 AMIS_45820 4d91691cbd183a294f477bb7b0ee62b4 287 Gene3D G3DSA:3.40.830.10 1 283 3.1E-60 T 14-10-2018 AMIS_30780 51e7718ab1a1889f42239d038859ead6 546 SUPERFAMILY SSF51905 3 544 9.74E-40 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_30780 51e7718ab1a1889f42239d038859ead6 546 SUPERFAMILY SSF56425 330 485 9.42E-33 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMIS_30780 51e7718ab1a1889f42239d038859ead6 546 Gene3D G3DSA:3.90.700.10 333 474 3.0E-145 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMIS_30780 51e7718ab1a1889f42239d038859ead6 546 Pfam PF00890 FAD binding domain 7 525 8.2E-89 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMIS_30780 51e7718ab1a1889f42239d038859ead6 546 Gene3D G3DSA:3.50.50.60 6 537 3.0E-145 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_8250 6a8f291cdd1117d98132897a13c9386f 294 SUPERFAMILY SSF161098 54 281 6.93E-56 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_8250 6a8f291cdd1117d98132897a13c9386f 294 Gene3D G3DSA:1.10.3720.10 48 291 1.7E-63 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_8250 6a8f291cdd1117d98132897a13c9386f 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 283 1.1E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_1880 2f65acad7e00d309c3a97c1149a31fc8 200 Pfam PF00578 AhpC/TSA family 49 161 6.1E-18 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AMIS_1880 2f65acad7e00d309c3a97c1149a31fc8 200 Gene3D G3DSA:3.40.30.10 40 182 5.0E-30 T 14-10-2018 AMIS_1880 2f65acad7e00d309c3a97c1149a31fc8 200 SUPERFAMILY SSF52833 49 183 4.09E-28 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMIS_1880 2f65acad7e00d309c3a97c1149a31fc8 200 ProSitePatterns PS00194 Thioredoxin family active site. 73 91 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AMIS_59730 9c2b8e66e695693d21cabbbed287e86e 233 Pfam PF04892 VanZ like family 128 212 8.1E-14 T 14-10-2018 IPR006976 VanZ-like AMIS_9410 51a45427975f96f4ed46a0edb1e3a6f3 140 Gene3D G3DSA:3.40.140.10 1 139 5.0E-34 T 14-10-2018 AMIS_9410 51a45427975f96f4ed46a0edb1e3a6f3 140 SMART SM00232 1 131 3.5E-29 T 14-10-2018 IPR000555 JAB1/MPN/MOV34 metalloenzyme domain GO:0005515 AMIS_9410 51a45427975f96f4ed46a0edb1e3a6f3 140 Pfam PF14464 Prokaryotic homologs of the JAB domain 6 121 1.8E-27 T 14-10-2018 IPR028090 JAB domain, prokaryotic AMIS_9410 51a45427975f96f4ed46a0edb1e3a6f3 140 SUPERFAMILY SSF102712 2 130 8.5E-29 T 14-10-2018 AMIS_77970 e54fef5f10bd250f66794af7b16399b4 331 SUPERFAMILY SSF52309 208 311 9.16E-5 T 14-10-2018 AMIS_9510 a2501ea19617f42597e9ba71171995d2 382 TIGRFAM TIGR01224 hutI: imidazolonepropionase 22 379 2.7E-115 T 14-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AMIS_9510 a2501ea19617f42597e9ba71171995d2 382 Gene3D G3DSA:3.20.20.140 59 342 2.1E-136 T 14-10-2018 AMIS_9510 a2501ea19617f42597e9ba71171995d2 382 Pfam PF01979 Amidohydrolase family 56 360 4.5E-22 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AMIS_9510 a2501ea19617f42597e9ba71171995d2 382 Gene3D G3DSA:2.30.40.10 17 379 2.1E-136 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMIS_9510 a2501ea19617f42597e9ba71171995d2 382 Hamap MF_00372 Imidazolonepropionase [hutI]. 2 382 43.733 T 14-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AMIS_9510 a2501ea19617f42597e9ba71171995d2 382 SUPERFAMILY SSF51338 12 380 1.6E-15 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMIS_9510 a2501ea19617f42597e9ba71171995d2 382 SUPERFAMILY SSF51556 58 340 4.54E-74 T 14-10-2018 IPR032466 Metal-dependent hydrolase AMIS_43090 b29e78ec9173197a83f8bfd35047c6a2 328 SUPERFAMILY SSF103642 304 323 3.92E-7 T 14-10-2018 AMIS_43090 b29e78ec9173197a83f8bfd35047c6a2 328 SUPERFAMILY SSF48452 43 150 2.31E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_43090 b29e78ec9173197a83f8bfd35047c6a2 328 Gene3D G3DSA:3.10.450.50 282 324 3.4E-7 T 14-10-2018 AMIS_43090 b29e78ec9173197a83f8bfd35047c6a2 328 Pfam PF02810 SEC-C motif 306 324 9.6E-10 T 14-10-2018 IPR004027 SEC-C motif AMIS_43090 b29e78ec9173197a83f8bfd35047c6a2 328 Gene3D G3DSA:1.25.40.10 28 264 4.5E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_20910 5e8d4d560855121a7cad2e0dc47e1415 625 Pfam PF10123 Mu-like prophage I protein 445 614 1.5E-9 T 14-10-2018 IPR012106 Protease, Mu phage/prophage I type AMIS_20910 5e8d4d560855121a7cad2e0dc47e1415 625 Gene3D G3DSA:3.90.1140.10 181 331 1.3E-8 T 14-10-2018 AMIS_20910 5e8d4d560855121a7cad2e0dc47e1415 625 SUPERFAMILY SSF55144 182 326 2.88E-8 T 14-10-2018 IPR009097 Cyclic phosphodiesterase AMIS_76260 886d2b7e396fec57c6920ac7877f196f 536 PIRSF PIRSF004862 1 535 5.2E-137 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AMIS_76260 886d2b7e396fec57c6920ac7877f196f 536 Gene3D G3DSA:3.30.300.30 120 222 1.3E-13 T 14-10-2018 AMIS_76260 886d2b7e396fec57c6920ac7877f196f 536 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 12 534 3.0E-82 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AMIS_76260 886d2b7e396fec57c6920ac7877f196f 536 Pfam PF01514 Secretory protein of YscJ/FliF family 31 220 1.8E-70 T 14-10-2018 IPR006182 Secretory protein YscJ/FliF AMIS_76260 886d2b7e396fec57c6920ac7877f196f 536 Pfam PF08345 Flagellar M-ring protein C-terminal 254 400 4.1E-28 T 14-10-2018 IPR013556 Flagellar M-ring C-terminal AMIS_76260 886d2b7e396fec57c6920ac7877f196f 536 PRINTS PR01009 Flagellar M-ring protein signature 121 139 1.3E-20 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AMIS_76260 886d2b7e396fec57c6920ac7877f196f 536 PRINTS PR01009 Flagellar M-ring protein signature 267 285 1.3E-20 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AMIS_76260 886d2b7e396fec57c6920ac7877f196f 536 PRINTS PR01009 Flagellar M-ring protein signature 336 360 1.3E-20 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AMIS_76260 886d2b7e396fec57c6920ac7877f196f 536 PRINTS PR01009 Flagellar M-ring protein signature 196 214 1.3E-20 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AMIS_76260 886d2b7e396fec57c6920ac7877f196f 536 PRINTS PR01009 Flagellar M-ring protein signature 153 167 1.3E-20 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AMIS_63170 ee3b2284b0e51df35d4cd1355903b27a 547 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 15 353 4.5E-99 T 14-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 AMIS_63170 ee3b2284b0e51df35d4cd1355903b27a 547 Pfam PF16124 RecQ zinc-binding 443 481 2.5E-10 T 14-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain AMIS_63170 ee3b2284b0e51df35d4cd1355903b27a 547 Pfam PF00270 DEAD/DEAH box helicase 29 190 1.0E-14 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMIS_63170 ee3b2284b0e51df35d4cd1355903b27a 547 SUPERFAMILY SSF52540 65 354 2.03E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_63170 ee3b2284b0e51df35d4cd1355903b27a 547 Gene3D G3DSA:3.40.50.300 7 210 2.8E-66 T 14-10-2018 AMIS_63170 ee3b2284b0e51df35d4cd1355903b27a 547 SMART SM00487 21 216 5.7E-28 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMIS_63170 ee3b2284b0e51df35d4cd1355903b27a 547 SMART SM00490 254 335 3.1E-26 T 14-10-2018 IPR001650 Helicase, C-terminal AMIS_63170 ee3b2284b0e51df35d4cd1355903b27a 547 Pfam PF00271 Helicase conserved C-terminal domain 233 334 3.4E-16 T 14-10-2018 IPR001650 Helicase, C-terminal AMIS_20370 6e046e25c9b9eb04ef48c5bc056b3a48 246 PRINTS PR00111 Alpha/beta hydrolase fold signature 97 110 7.6E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_20370 6e046e25c9b9eb04ef48c5bc056b3a48 246 PRINTS PR00111 Alpha/beta hydrolase fold signature 83 96 7.6E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_20370 6e046e25c9b9eb04ef48c5bc056b3a48 246 PRINTS PR00111 Alpha/beta hydrolase fold signature 35 50 7.6E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_20370 6e046e25c9b9eb04ef48c5bc056b3a48 246 SUPERFAMILY SSF53474 6 220 6.28E-28 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_20370 6e046e25c9b9eb04ef48c5bc056b3a48 246 Pfam PF00561 alpha/beta hydrolase fold 11 125 4.3E-13 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_20370 6e046e25c9b9eb04ef48c5bc056b3a48 246 Gene3D G3DSA:3.40.50.1820 2 224 4.3E-30 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_50440 eadc1313748908dd8cab76712fb0c189 78 SUPERFAMILY SSF47336 1 74 2.62E-15 T 14-10-2018 IPR036736 ACP-like superfamily AMIS_50440 eadc1313748908dd8cab76712fb0c189 78 Gene3D G3DSA:1.10.1200.10 1 77 1.2E-22 T 14-10-2018 IPR036736 ACP-like superfamily AMIS_50440 eadc1313748908dd8cab76712fb0c189 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 33 48 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site AMIS_50440 eadc1313748908dd8cab76712fb0c189 78 Pfam PF00550 Phosphopantetheine attachment site 19 72 8.0E-12 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain AMIS_74030 b0f5ddc45534efc1e2889e7facc983de 288 Pfam PF07501 G5 domain 140 212 1.5E-16 T 14-10-2018 IPR011098 G5 domain AMIS_74030 b0f5ddc45534efc1e2889e7facc983de 288 SMART SM01208 136 214 9.4E-21 T 14-10-2018 IPR011098 G5 domain AMIS_74030 b0f5ddc45534efc1e2889e7facc983de 288 Gene3D G3DSA:2.20.230.10 96 211 4.8E-16 T 14-10-2018 AMIS_59590 bf67d28d63a91186b0fee4039536bbf0 245 Gene3D G3DSA:3.40.1410.10 83 245 1.1E-46 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AMIS_59590 bf67d28d63a91186b0fee4039536bbf0 245 Pfam PF07702 UTRA domain 99 237 2.4E-35 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AMIS_59590 bf67d28d63a91186b0fee4039536bbf0 245 Pfam PF00392 Bacterial regulatory proteins, gntR family 20 79 1.6E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_59590 bf67d28d63a91186b0fee4039536bbf0 245 SUPERFAMILY SSF64288 67 243 1.08E-45 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AMIS_59590 bf67d28d63a91186b0fee4039536bbf0 245 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 53 6.1E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_59590 bf67d28d63a91186b0fee4039536bbf0 245 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 53 69 6.1E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_59590 bf67d28d63a91186b0fee4039536bbf0 245 Gene3D G3DSA:1.10.10.10 16 82 1.1E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_59590 bf67d28d63a91186b0fee4039536bbf0 245 SMART SM00345 22 79 1.1E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_59590 bf67d28d63a91186b0fee4039536bbf0 245 SMART SM00866 99 238 2.2E-37 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AMIS_59590 bf67d28d63a91186b0fee4039536bbf0 245 SUPERFAMILY SSF46785 13 89 4.71E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_8230 e3af25eff54cac02ed3ba86dbe0f8470 336 Gene3D G3DSA:1.10.260.40 1 58 2.4E-22 T 14-10-2018 AMIS_8230 e3af25eff54cac02ed3ba86dbe0f8470 336 Gene3D G3DSA:3.40.50.2300 62 322 3.0E-77 T 14-10-2018 AMIS_8230 e3af25eff54cac02ed3ba86dbe0f8470 336 Gene3D G3DSA:3.40.50.2300 160 327 3.0E-77 T 14-10-2018 AMIS_8230 e3af25eff54cac02ed3ba86dbe0f8470 336 SUPERFAMILY SSF47413 3 58 4.78E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_8230 e3af25eff54cac02ed3ba86dbe0f8470 336 Pfam PF13377 Periplasmic binding protein-like domain 168 330 1.0E-34 T 14-10-2018 AMIS_8230 e3af25eff54cac02ed3ba86dbe0f8470 336 SUPERFAMILY SSF53822 61 332 1.31E-66 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_8230 e3af25eff54cac02ed3ba86dbe0f8470 336 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 AMIS_8230 e3af25eff54cac02ed3ba86dbe0f8470 336 SMART SM00354 1 71 1.7E-28 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_8230 e3af25eff54cac02ed3ba86dbe0f8470 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 4.5E-16 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_37720 590e8b35cf92f754a8196bdb9c78792e 478 Gene3D G3DSA:3.40.309.10 253 441 6.0E-163 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AMIS_37720 590e8b35cf92f754a8196bdb9c78792e 478 SUPERFAMILY SSF53720 5 475 2.23E-154 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMIS_37720 590e8b35cf92f754a8196bdb9c78792e 478 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 249 256 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AMIS_37720 590e8b35cf92f754a8196bdb9c78792e 478 Pfam PF00171 Aldehyde dehydrogenase family 24 472 2.4E-157 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AMIS_37720 590e8b35cf92f754a8196bdb9c78792e 478 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 277 288 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AMIS_37720 590e8b35cf92f754a8196bdb9c78792e 478 Gene3D G3DSA:3.40.605.10 26 466 6.0E-163 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AMIS_2500 65896e905367fb9c70cd22100a8b8b9b 322 SUPERFAMILY SSF56563 4 239 6.02E-8 T 14-10-2018 AMIS_70770 5f7bdd230dbdb594294c1f0b585aa6ad 578 Pfam PF13684 Dihydroxyacetone kinase family 286 578 1.2E-78 T 14-10-2018 IPR033470 Uncharacterised protein, DhaK domain AMIS_70770 5f7bdd230dbdb594294c1f0b585aa6ad 578 SUPERFAMILY SSF101473 5 203 1.57E-37 T 14-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 AMIS_70770 5f7bdd230dbdb594294c1f0b585aa6ad 578 Pfam PF02734 DAK2 domain 35 200 5.9E-36 T 14-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 AMIS_70770 5f7bdd230dbdb594294c1f0b585aa6ad 578 TIGRFAM TIGR03599 YloV: DAK2 domain fusion protein YloV 12 578 5.7E-134 T 14-10-2018 IPR019986 DAK2 domain-containing protein YloV AMIS_70770 5f7bdd230dbdb594294c1f0b585aa6ad 578 SMART SM01121 285 578 1.7E-94 T 14-10-2018 IPR033470 Uncharacterised protein, DhaK domain AMIS_70770 5f7bdd230dbdb594294c1f0b585aa6ad 578 SMART SM01120 35 201 2.1E-53 T 14-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 AMIS_81250 b2a2cca2828943aeebf1df323b065444 45 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 3 45 6.2E-21 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_81250 b2a2cca2828943aeebf1df323b065444 45 Pfam PF00468 Ribosomal protein L34 3 45 7.4E-21 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_81250 b2a2cca2828943aeebf1df323b065444 45 ProSitePatterns PS00784 Ribosomal protein L34 signature. 3 22 - T 14-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_81250 b2a2cca2828943aeebf1df323b065444 45 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 2 45 15.687 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_81250 b2a2cca2828943aeebf1df323b065444 45 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 3 43 8.0E-14 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_37370 a259ae0659e57fd0c4deb8b4c154edf7 151 Pfam PF13190 PDGLE domain 15 105 5.8E-21 T 14-10-2018 IPR025937 PDGLE domain AMIS_37370 a259ae0659e57fd0c4deb8b4c154edf7 151 ProDom PD486863 PRECURSOR CBIM SIGNAL COBALT MEMBRANE VITAMIN B12 BIOSYNTHESIS COBALAMIN ABC-TYPE 24 109 5.0E-9 T 14-10-2018 AMIS_57250 9019fa5fefa7ea336cc15d1f42078b53 269 Pfam PF06405 Red chlorophyll catabolite reductase (RCC reductase) 28 256 1.2E-18 T 14-10-2018 IPR009439 Red chlorophyll catabolite reductase GO:0051743 KEGG: 00860+1.3.7.12|MetaCyc: PWY-5098|MetaCyc: PWY-6927 AMIS_57250 9019fa5fefa7ea336cc15d1f42078b53 269 Gene3D G3DSA:3.40.1500.20 23 258 3.5E-62 T 14-10-2018 AMIS_32030 68b68b92bd0573afe959da2f087669c0 335 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 333 5.8E-38 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_32030 68b68b92bd0573afe959da2f087669c0 335 SUPERFAMILY SSF161098 91 321 4.91E-20 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_32030 68b68b92bd0573afe959da2f087669c0 335 Gene3D G3DSA:1.10.3720.10 84 326 7.9E-27 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_58050 fed4953cb3d2fc1575dd3d0fa3e2a299 168 Pfam PF01862 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) 10 123 8.5E-20 T 14-10-2018 IPR002724 Pyruvoyl-dependent arginine decarboxylase GO:0006527|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AMIS_58050 fed4953cb3d2fc1575dd3d0fa3e2a299 168 Gene3D G3DSA:3.50.20.10 4 158 1.8E-27 T 14-10-2018 IPR016105 Pyruvoyl-dependent histidine/arginine decarboxylase, 3-layer sandwich domain GO:0006520|GO:0016831 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AMIS_58050 fed4953cb3d2fc1575dd3d0fa3e2a299 168 ProDom PD010449 DECARBOXYLASE PYRUVOYL-DEPENDENT ARGININE SUBUNIT ALPHA CONTAINS: BETA PVLARGDC LYA DECARBOX 18 133 3.0E-5 T 14-10-2018 IPR002724 Pyruvoyl-dependent arginine decarboxylase GO:0006527|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AMIS_58050 fed4953cb3d2fc1575dd3d0fa3e2a299 168 SUPERFAMILY SSF56271 10 155 6.28E-21 T 14-10-2018 IPR016104 Pyruvoyl-dependent histidine/arginine decarboxylase GO:0006520|GO:0016831 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AMIS_50290 9357d7ec245a7858cada0859d6f39dbe 465 Gene3D G3DSA:1.20.1720.10 21 227 1.2E-49 T 14-10-2018 AMIS_50290 9357d7ec245a7858cada0859d6f39dbe 465 SUPERFAMILY SSF103473 14 464 8.5E-68 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_50290 9357d7ec245a7858cada0859d6f39dbe 465 Gene3D G3DSA:1.20.1250.20 272 463 1.2E-17 T 14-10-2018 AMIS_50290 9357d7ec245a7858cada0859d6f39dbe 465 PRINTS PR01036 Tetracycline resistance protein TetB signature 407 426 1.8E-11 T 14-10-2018 AMIS_50290 9357d7ec245a7858cada0859d6f39dbe 465 PRINTS PR01036 Tetracycline resistance protein TetB signature 24 48 1.8E-11 T 14-10-2018 AMIS_50290 9357d7ec245a7858cada0859d6f39dbe 465 PRINTS PR01036 Tetracycline resistance protein TetB signature 115 135 1.8E-11 T 14-10-2018 AMIS_50290 9357d7ec245a7858cada0859d6f39dbe 465 PRINTS PR01036 Tetracycline resistance protein TetB signature 145 169 1.8E-11 T 14-10-2018 AMIS_50290 9357d7ec245a7858cada0859d6f39dbe 465 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 23 429 5.7E-85 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 AMIS_50290 9357d7ec245a7858cada0859d6f39dbe 465 Pfam PF07690 Major Facilitator Superfamily 29 308 2.6E-38 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_75410 1114ee590e5528746fa07a449a42571e 205 Pfam PF01914 MarC family integral membrane protein 4 194 4.5E-51 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AMIS_75410 1114ee590e5528746fa07a449a42571e 205 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 5 192 6.9E-47 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AMIS_8360 a28fd31e1a6335e31b912599330f8f56 243 SUPERFAMILY SSF55781 26 174 2.18E-22 T 14-10-2018 AMIS_8360 a28fd31e1a6335e31b912599330f8f56 243 Pfam PF13185 GAF domain 27 163 4.4E-16 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_8360 a28fd31e1a6335e31b912599330f8f56 243 Gene3D G3DSA:1.10.10.10 179 236 1.2E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_8360 a28fd31e1a6335e31b912599330f8f56 243 PIRSF PIRSF036625 1 241 9.1E-59 T 14-10-2018 IPR012074 GAF-ANTAR transcription anti-termination regulator, putative AMIS_8360 a28fd31e1a6335e31b912599330f8f56 243 Gene3D G3DSA:3.30.450.40 5 178 6.0E-26 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_8360 a28fd31e1a6335e31b912599330f8f56 243 SMART SM00065 25 174 1.2E-9 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_8360 a28fd31e1a6335e31b912599330f8f56 243 SMART SM01012 176 231 1.0E-18 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 AMIS_8360 a28fd31e1a6335e31b912599330f8f56 243 Pfam PF03861 ANTAR domain 178 231 2.1E-17 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 AMIS_8360 a28fd31e1a6335e31b912599330f8f56 243 SUPERFAMILY SSF52172 161 231 3.93E-9 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_4990 ffc1c9f65a069c43c83484fd27f8efd1 357 Gene3D G3DSA:2.150.10.10 155 219 6.6E-14 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_4990 ffc1c9f65a069c43c83484fd27f8efd1 357 Gene3D G3DSA:2.150.10.10 55 154 3.8E-9 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_4990 ffc1c9f65a069c43c83484fd27f8efd1 357 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 268 283 0.52 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_4990 ffc1c9f65a069c43c83484fd27f8efd1 357 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 86 103 0.065 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_4990 ffc1c9f65a069c43c83484fd27f8efd1 357 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 158 172 0.018 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_4990 ffc1c9f65a069c43c83484fd27f8efd1 357 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 173 190 0.0018 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_4990 ffc1c9f65a069c43c83484fd27f8efd1 357 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 193 208 0.0094 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_4990 ffc1c9f65a069c43c83484fd27f8efd1 357 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 128 145 0.23 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_4990 ffc1c9f65a069c43c83484fd27f8efd1 357 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 112 126 0.44 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_4990 ffc1c9f65a069c43c83484fd27f8efd1 357 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 219 230 58.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_4990 ffc1c9f65a069c43c83484fd27f8efd1 357 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 289 302 0.16 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_4990 ffc1c9f65a069c43c83484fd27f8efd1 357 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 305 321 0.0039 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMIS_4990 ffc1c9f65a069c43c83484fd27f8efd1 357 SUPERFAMILY SSF51120 210 338 1.67E-15 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_4990 ffc1c9f65a069c43c83484fd27f8efd1 357 Gene3D G3DSA:2.150.10.10 220 328 8.1E-17 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_4990 ffc1c9f65a069c43c83484fd27f8efd1 357 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 188 206 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site AMIS_4990 ffc1c9f65a069c43c83484fd27f8efd1 357 PRINTS PR00313 NodO calcium binding signature 84 95 2.1E-11 T 14-10-2018 AMIS_4990 ffc1c9f65a069c43c83484fd27f8efd1 357 PRINTS PR00313 NodO calcium binding signature 183 191 2.1E-11 T 14-10-2018 AMIS_4990 ffc1c9f65a069c43c83484fd27f8efd1 357 PRINTS PR00313 NodO calcium binding signature 201 209 2.1E-11 T 14-10-2018 AMIS_4990 ffc1c9f65a069c43c83484fd27f8efd1 357 PRINTS PR00313 NodO calcium binding signature 224 233 2.1E-11 T 14-10-2018 AMIS_4990 ffc1c9f65a069c43c83484fd27f8efd1 357 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 170 188 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site AMIS_4990 ffc1c9f65a069c43c83484fd27f8efd1 357 SUPERFAMILY SSF51120 86 214 3.98E-23 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_230 24c9bddf671758d33e2a532dd1135cf2 934 SUPERFAMILY SSF48452 609 784 3.08E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_230 24c9bddf671758d33e2a532dd1135cf2 934 Gene3D G3DSA:1.25.40.10 633 744 4.1E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_230 24c9bddf671758d33e2a532dd1135cf2 934 SUPERFAMILY SSF48452 459 622 1.52E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_230 24c9bddf671758d33e2a532dd1135cf2 934 SUPERFAMILY SSF48452 834 904 1.55E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_230 24c9bddf671758d33e2a532dd1135cf2 934 Gene3D G3DSA:1.25.40.10 108 244 8.4E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_230 24c9bddf671758d33e2a532dd1135cf2 934 Gene3D G3DSA:1.25.40.10 396 623 1.0E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_230 24c9bddf671758d33e2a532dd1135cf2 934 Gene3D G3DSA:1.25.40.10 745 905 5.3E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_26750 29c4b88639de431f21b3027a3e61c4bd 241 SUPERFAMILY SSF52540 30 208 7.79E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_26750 29c4b88639de431f21b3027a3e61c4bd 241 Gene3D G3DSA:3.40.50.300 100 203 1.0E-7 T 14-10-2018 AMIS_26750 29c4b88639de431f21b3027a3e61c4bd 241 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 142 193 2.6E-7 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMIS_26750 29c4b88639de431f21b3027a3e61c4bd 241 Gene3D G3DSA:3.40.50.300 22 91 1.3E-6 T 14-10-2018 AMIS_26750 29c4b88639de431f21b3027a3e61c4bd 241 SMART SM00382 35 214 3.1E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_26750 29c4b88639de431f21b3027a3e61c4bd 241 Pfam PF13476 AAA domain 25 67 2.5E-8 T 14-10-2018 IPR038729 Rad50/SbcC-type AAA domain AMIS_47250 86bdfb1c2db8742a50f08a4a642d2131 249 SUPERFAMILY SSF52540 2 242 9.82E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_47250 86bdfb1c2db8742a50f08a4a642d2131 249 SMART SM00382 28 214 3.0E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_47250 86bdfb1c2db8742a50f08a4a642d2131 249 Gene3D G3DSA:3.40.50.300 1 248 2.1E-80 T 14-10-2018 AMIS_47250 86bdfb1c2db8742a50f08a4a642d2131 249 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_47250 86bdfb1c2db8742a50f08a4a642d2131 249 Pfam PF00005 ABC transporter 19 164 1.1E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_47250 86bdfb1c2db8742a50f08a4a642d2131 249 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 216 244 7.5E-6 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMIS_16840 286e2b5374169a61d518bfa840631496 109 Gene3D G3DSA:3.30.750.24 3 107 5.4E-23 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_16840 286e2b5374169a61d518bfa840631496 109 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 12 102 1.9E-15 T 14-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 AMIS_16840 286e2b5374169a61d518bfa840631496 109 Pfam PF13466 STAS domain 22 96 1.5E-16 T 14-10-2018 IPR002645 STAS domain AMIS_16840 286e2b5374169a61d518bfa840631496 109 SUPERFAMILY SSF52091 13 104 2.35E-19 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_59480 171a154982d542f9fa2bd79b74d8a7dd 247 SUPERFAMILY SSF46689 195 245 2.02E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_59480 171a154982d542f9fa2bd79b74d8a7dd 247 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 226 242 3.5E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMIS_59480 171a154982d542f9fa2bd79b74d8a7dd 247 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 211 226 3.5E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMIS_59480 171a154982d542f9fa2bd79b74d8a7dd 247 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 196 238 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AMIS_59480 171a154982d542f9fa2bd79b74d8a7dd 247 Gene3D G3DSA:1.10.10.60 138 246 8.5E-26 T 14-10-2018 AMIS_59480 171a154982d542f9fa2bd79b74d8a7dd 247 SMART SM00342 159 242 2.8E-25 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMIS_59480 171a154982d542f9fa2bd79b74d8a7dd 247 Pfam PF12833 Helix-turn-helix domain 165 243 2.8E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMIS_40470 c2ff02d8e85b8f59d5c99a0e9c55ce67 280 Pfam PF13377 Periplasmic binding protein-like domain 114 268 4.7E-19 T 14-10-2018 AMIS_40470 c2ff02d8e85b8f59d5c99a0e9c55ce67 280 SUPERFAMILY SSF53822 19 253 1.35E-42 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_40470 c2ff02d8e85b8f59d5c99a0e9c55ce67 280 Gene3D G3DSA:3.40.50.2300 106 230 2.6E-42 T 14-10-2018 AMIS_40470 c2ff02d8e85b8f59d5c99a0e9c55ce67 280 Gene3D G3DSA:3.40.50.2300 21 251 2.6E-42 T 14-10-2018 AMIS_29150 57ac94b4640c494ed2ecb88059b24707 168 SUPERFAMILY SSF55781 28 163 8.94E-17 T 14-10-2018 AMIS_29150 57ac94b4640c494ed2ecb88059b24707 168 Pfam PF01590 GAF domain 29 158 5.4E-8 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_29150 57ac94b4640c494ed2ecb88059b24707 168 Gene3D G3DSA:3.30.450.40 16 167 1.6E-14 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_54290 80fc73255ad8c8a5c9bb72f67a5e0536 448 Hamap MF_00027 Hydrogenobyrinate a,c-diamide synthase [cobB]. 2 437 40.329 T 14-10-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 AMIS_54290 80fc73255ad8c8a5c9bb72f67a5e0536 448 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 189 3.2E-20 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AMIS_54290 80fc73255ad8c8a5c9bb72f67a5e0536 448 Gene3D G3DSA:3.40.50.880 250 412 6.2E-7 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_54290 80fc73255ad8c8a5c9bb72f67a5e0536 448 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 250 436 4.6E-20 T 14-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 AMIS_54290 80fc73255ad8c8a5c9bb72f67a5e0536 448 SUPERFAMILY SSF52317 249 445 1.27E-27 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_54290 80fc73255ad8c8a5c9bb72f67a5e0536 448 TIGRFAM TIGR00379 cobB: cobyrinic acid a,c-diamide synthase 4 447 3.2E-114 T 14-10-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 AMIS_54290 80fc73255ad8c8a5c9bb72f67a5e0536 448 Gene3D G3DSA:3.40.50.300 42 189 1.3E-22 T 14-10-2018 AMIS_54290 80fc73255ad8c8a5c9bb72f67a5e0536 448 SUPERFAMILY SSF52540 1 195 1.97E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_27630 26f121bdbf4d5d6e28c8c33010bb2194 363 SUPERFAMILY SSF51905 1 358 7.98E-35 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_27630 26f121bdbf4d5d6e28c8c33010bb2194 363 Pfam PF01494 FAD binding domain 150 347 4.4E-5 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 AMIS_27630 26f121bdbf4d5d6e28c8c33010bb2194 363 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 150 165 1.4E-12 T 14-10-2018 AMIS_27630 26f121bdbf4d5d6e28c8c33010bb2194 363 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 1.4E-12 T 14-10-2018 AMIS_27630 26f121bdbf4d5d6e28c8c33010bb2194 363 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 311 1.4E-12 T 14-10-2018 AMIS_27630 26f121bdbf4d5d6e28c8c33010bb2194 363 Gene3D G3DSA:3.50.50.60 1 362 4.5E-93 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_4070 979e55e05fbd267e9de5c6bee30d47c9 119 Pfam PF11512 Agrobacterium tumefaciens protein Atu4866 47 113 2.1E-7 T 14-10-2018 IPR020955 Uncharacterised protein family Atu4866 AMIS_4070 979e55e05fbd267e9de5c6bee30d47c9 119 Gene3D G3DSA:2.40.128.290 44 118 1.0E-7 T 14-10-2018 IPR038646 Atu4866-like superfamily AMIS_11520 4b960c504032f4d08a842d7f7679f905 122 Pfam PF02410 Ribosomal silencing factor during starvation 3 99 1.3E-23 T 14-10-2018 AMIS_11520 4b960c504032f4d08a842d7f7679f905 122 Gene3D G3DSA:3.30.460.10 1 103 3.2E-36 T 14-10-2018 AMIS_11520 4b960c504032f4d08a842d7f7679f905 122 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 2 100 20.735 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AMIS_11520 4b960c504032f4d08a842d7f7679f905 122 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 3 99 8.2E-31 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AMIS_11520 4b960c504032f4d08a842d7f7679f905 122 SUPERFAMILY SSF81301 3 107 3.27E-35 T 14-10-2018 AMIS_79140 c74c874dfae9f4a9f634aded0cf38be0 264 SUPERFAMILY SSF51658 3 257 2.09E-51 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily AMIS_79140 c74c874dfae9f4a9f634aded0cf38be0 264 Pfam PF01261 Xylose isomerase-like TIM barrel 31 217 7.0E-28 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AMIS_79140 c74c874dfae9f4a9f634aded0cf38be0 264 Gene3D G3DSA:3.20.20.150 1 264 4.3E-64 T 14-10-2018 AMIS_31500 a5a7cc0121f45989db931197c7b60236 204 SUPERFAMILY SSF52540 2 160 1.59E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_50550 c57aaa3afc627d3a0bda27bd9b965877 399 SUPERFAMILY SSF48264 18 399 5.63E-95 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_50550 c57aaa3afc627d3a0bda27bd9b965877 399 Pfam PF00067 Cytochrome P450 269 371 2.5E-18 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_50550 c57aaa3afc627d3a0bda27bd9b965877 399 PRINTS PR00385 P450 superfamily signature 271 282 2.1E-7 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_50550 c57aaa3afc627d3a0bda27bd9b965877 399 PRINTS PR00385 P450 superfamily signature 348 359 2.1E-7 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_50550 c57aaa3afc627d3a0bda27bd9b965877 399 PRINTS PR00385 P450 superfamily signature 237 254 2.1E-7 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_50550 c57aaa3afc627d3a0bda27bd9b965877 399 PRINTS PR00385 P450 superfamily signature 339 348 2.1E-7 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_50550 c57aaa3afc627d3a0bda27bd9b965877 399 Gene3D G3DSA:1.10.630.10 12 399 2.2E-126 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_50550 c57aaa3afc627d3a0bda27bd9b965877 399 PRINTS PR00359 B-class P450 signature 271 282 1.1E-53 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_50550 c57aaa3afc627d3a0bda27bd9b965877 399 PRINTS PR00359 B-class P450 signature 290 317 1.1E-53 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_50550 c57aaa3afc627d3a0bda27bd9b965877 399 PRINTS PR00359 B-class P450 signature 348 359 1.1E-53 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_50550 c57aaa3afc627d3a0bda27bd9b965877 399 PRINTS PR00359 B-class P450 signature 88 99 1.1E-53 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_50550 c57aaa3afc627d3a0bda27bd9b965877 399 PRINTS PR00359 B-class P450 signature 135 151 1.1E-53 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_50550 c57aaa3afc627d3a0bda27bd9b965877 399 PRINTS PR00359 B-class P450 signature 190 212 1.1E-53 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_50550 c57aaa3afc627d3a0bda27bd9b965877 399 PRINTS PR00359 B-class P450 signature 152 167 1.1E-53 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_50550 c57aaa3afc627d3a0bda27bd9b965877 399 PRINTS PR00359 B-class P450 signature 318 333 1.1E-53 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_50550 c57aaa3afc627d3a0bda27bd9b965877 399 PRINTS PR00359 B-class P450 signature 339 348 1.1E-53 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_50550 c57aaa3afc627d3a0bda27bd9b965877 399 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 341 350 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 AMIS_34380 09e3840c327778d6f659dc33c6cb9557 131 Gene3D G3DSA:3.40.50.150 3 102 1.8E-11 T 14-10-2018 AMIS_34380 09e3840c327778d6f659dc33c6cb9557 131 Pfam PF13578 Methyltransferase domain 12 82 1.2E-7 T 14-10-2018 AMIS_34380 09e3840c327778d6f659dc33c6cb9557 131 SUPERFAMILY SSF53335 6 94 6.29E-11 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_69600 30ce68782c4578c5d26bcf1c548ed349 333 Gene3D G3DSA:3.10.310.30 206 329 4.7E-29 T 14-10-2018 AMIS_69600 30ce68782c4578c5d26bcf1c548ed349 333 Gene3D G3DSA:3.90.1640.10 10 205 1.0E-45 T 14-10-2018 AMIS_69600 30ce68782c4578c5d26bcf1c548ed349 333 Pfam PF02272 DHHA1 domain 254 326 2.4E-8 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 AMIS_69600 30ce68782c4578c5d26bcf1c548ed349 333 SUPERFAMILY SSF64182 22 324 1.96E-50 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily AMIS_69600 30ce68782c4578c5d26bcf1c548ed349 333 Pfam PF01368 DHH family 24 165 5.7E-10 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AMIS_35540 c06095664bfce1ca1eb39eb47bf56797 155 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 14 153 1.0E-19 T 14-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like AMIS_35540 c06095664bfce1ca1eb39eb47bf56797 155 SUPERFAMILY SSF55961 7 153 3.81E-29 T 14-10-2018 AMIS_35540 c06095664bfce1ca1eb39eb47bf56797 155 Gene3D G3DSA:3.30.530.20 2 155 4.5E-33 T 14-10-2018 IPR023393 START-like domain superfamily AMIS_17600 128081683e763be993d2815b70941623 149 SUPERFAMILY SSF52821 50 100 1.01E-8 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily AMIS_17600 128081683e763be993d2815b70941623 149 Gene3D G3DSA:3.40.250.10 46 94 8.1E-9 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily AMIS_22400 e947f1381f8f40a14b1572327ea60cc3 128 SUPERFAMILY SSF69754 38 114 9.55E-7 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like AMIS_22400 e947f1381f8f40a14b1572327ea60cc3 128 Gene3D G3DSA:3.30.160.100 28 118 3.6E-5 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like AMIS_36320 65d711d0903f0b2007cfe184034fa179 323 Pfam PF01636 Phosphotransferase enzyme family 28 275 1.7E-15 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase AMIS_36320 65d711d0903f0b2007cfe184034fa179 323 SUPERFAMILY SSF56112 1 304 2.77E-29 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMIS_36320 65d711d0903f0b2007cfe184034fa179 323 Gene3D G3DSA:1.10.510.10 190 271 1.2E-13 T 14-10-2018 AMIS_56760 0b63641c464e97227d6152e31ac511cb 434 Pfam PF02397 Bacterial sugar transferase 220 412 2.9E-52 T 14-10-2018 IPR003362 Bacterial sugar transferase AMIS_56760 0b63641c464e97227d6152e31ac511cb 434 Pfam PF00583 Acetyltransferase (GNAT) family 62 181 3.5E-9 T 14-10-2018 IPR000182 GNAT domain AMIS_56760 0b63641c464e97227d6152e31ac511cb 434 Gene3D G3DSA:3.40.630.30 11 200 3.7E-20 T 14-10-2018 AMIS_56760 0b63641c464e97227d6152e31ac511cb 434 SUPERFAMILY SSF55729 11 184 9.04E-16 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_29080 f8d64a63ba1a4ffe7d3892e883a7047a 217 SMART SM00554 120 216 1.1E-32 T 14-10-2018 IPR000782 FAS1 domain AMIS_29080 f8d64a63ba1a4ffe7d3892e883a7047a 217 SUPERFAMILY SSF82153 81 216 4.05E-36 T 14-10-2018 IPR036378 FAS1 domain superfamily AMIS_29080 f8d64a63ba1a4ffe7d3892e883a7047a 217 Pfam PF02469 Fasciclin domain 96 215 6.6E-32 T 14-10-2018 IPR000782 FAS1 domain AMIS_29080 f8d64a63ba1a4ffe7d3892e883a7047a 217 Gene3D G3DSA:2.30.180.10 59 217 1.0E-48 T 14-10-2018 IPR036378 FAS1 domain superfamily AMIS_18190 89f9f3d3f428725c95586d0b63be15ce 557 ProSitePatterns PS00211 ABC transporters family signature. 458 472 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_18190 89f9f3d3f428725c95586d0b63be15ce 557 SUPERFAMILY SSF90123 6 314 3.01E-50 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMIS_18190 89f9f3d3f428725c95586d0b63be15ce 557 Pfam PF00005 ABC transporter 342 485 5.3E-12 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_18190 89f9f3d3f428725c95586d0b63be15ce 557 Gene3D G3DSA:1.20.1560.10 3 317 1.3E-48 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMIS_18190 89f9f3d3f428725c95586d0b63be15ce 557 Pfam PF00664 ABC transporter transmembrane region 20 282 1.9E-13 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AMIS_18190 89f9f3d3f428725c95586d0b63be15ce 557 SUPERFAMILY SSF52540 340 555 7.1E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_18190 89f9f3d3f428725c95586d0b63be15ce 557 Gene3D G3DSA:3.40.50.300 328 557 2.3E-45 T 14-10-2018 AMIS_68720 ef836d31c2e754695694c2ab06aca411 133 Gene3D G3DSA:3.40.50.12740 8 131 3.0E-34 T 14-10-2018 AMIS_68720 ef836d31c2e754695694c2ab06aca411 133 SUPERFAMILY SSF52172 8 125 1.12E-33 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_68720 ef836d31c2e754695694c2ab06aca411 133 SMART SM00448 9 122 3.1E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_68720 ef836d31c2e754695694c2ab06aca411 133 Pfam PF00072 Response regulator receiver domain 11 120 2.1E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_78940 a428843c6f90a1389cd222e7ddba3227 279 Gene3D G3DSA:3.30.470.20 85 229 1.5E-50 T 14-10-2018 AMIS_78940 a428843c6f90a1389cd222e7ddba3227 279 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 4 277 1.6E-60 T 14-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 AMIS_78940 a428843c6f90a1389cd222e7ddba3227 279 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 1 275 24.276 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AMIS_78940 a428843c6f90a1389cd222e7ddba3227 279 Pfam PF01259 SAICAR synthetase 4 250 3.9E-89 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AMIS_78940 a428843c6f90a1389cd222e7ddba3227 279 SUPERFAMILY SSF56104 2 278 3.2E-89 T 14-10-2018 AMIS_78940 a428843c6f90a1389cd222e7ddba3227 279 Gene3D G3DSA:3.30.200.20 1 84 1.5E-29 T 14-10-2018 AMIS_68120 05a2106eba5310d067de2fe2e7db8afb 278 SMART SM00422 10 80 7.4E-19 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_68120 05a2106eba5310d067de2fe2e7db8afb 278 SUPERFAMILY SSF46955 9 104 6.11E-21 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily AMIS_68120 05a2106eba5310d067de2fe2e7db8afb 278 Pfam PF13411 MerR HTH family regulatory protein 10 78 2.5E-13 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_68120 05a2106eba5310d067de2fe2e7db8afb 278 Gene3D G3DSA:1.10.1660.10 3 121 1.4E-22 T 14-10-2018 AMIS_68120 05a2106eba5310d067de2fe2e7db8afb 278 Gene3D G3DSA:3.20.80.10 122 269 5.0E-16 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily AMIS_23330 b455f454bae7551863891e647438513b 206 Gene3D G3DSA:1.25.40.10 25 161 8.9E-19 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_5410 52a8957b82cce73935a5864faaea44da 322 Pfam PF11350 Protein of unknown function (DUF3152) 126 301 7.1E-34 T 14-10-2018 IPR022603 Domain of unknown function DUF3152 AMIS_5410 52a8957b82cce73935a5864faaea44da 322 SUPERFAMILY SSF55486 170 305 4.3E-12 T 14-10-2018 AMIS_73970 e9650eb942b82604d746637919d0f022 103 SUPERFAMILY SSF55248 16 97 5.23E-6 T 14-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 AMIS_66060 6d95b81bac65c31690addfde5e72e945 469 SMART SM00507 337 389 2.7E-12 T 14-10-2018 IPR003615 HNH nuclease AMIS_66060 6d95b81bac65c31690addfde5e72e945 469 Pfam PF02720 Domain of unknown function (DUF222) 43 346 3.7E-51 T 14-10-2018 IPR003870 Domain of unknown function DUF222 AMIS_66060 6d95b81bac65c31690addfde5e72e945 469 Pfam PF01844 HNH endonuclease 353 392 3.7E-6 T 14-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 AMIS_10490 1fbe7813d133de553e791bfa3eaacdaa 247 SUPERFAMILY SSF52540 11 198 7.19E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_10490 1fbe7813d133de553e791bfa3eaacdaa 247 Gene3D G3DSA:3.40.50.300 9 207 5.0E-35 T 14-10-2018 AMIS_10490 1fbe7813d133de553e791bfa3eaacdaa 247 Pfam PF02223 Thymidylate kinase 17 198 4.7E-15 T 14-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 AMIS_22740 aa52b9fca948f161ad82c7c2d70e90f3 432 Gene3D G3DSA:3.20.20.450 13 257 1.1E-48 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_22740 aa52b9fca948f161ad82c7c2d70e90f3 432 Pfam PF10069 Sensory domain in DIguanylate Cyclases and Two-component system 284 385 9.7E-9 T 14-10-2018 IPR019278 DICT domain AMIS_22740 aa52b9fca948f161ad82c7c2d70e90f3 432 SUPERFAMILY SSF141868 17 253 2.48E-46 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_22740 aa52b9fca948f161ad82c7c2d70e90f3 432 Pfam PF00563 EAL domain 22 245 6.1E-39 T 14-10-2018 IPR001633 EAL domain AMIS_22740 aa52b9fca948f161ad82c7c2d70e90f3 432 SMART SM00052 10 250 8.3E-27 T 14-10-2018 IPR001633 EAL domain AMIS_27600 eb4f6884558e50d577cc63f9495fa2aa 296 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 241 259 4.8E-37 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) AMIS_27600 eb4f6884558e50d577cc63f9495fa2aa 296 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 98 119 4.8E-37 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) AMIS_27600 eb4f6884558e50d577cc63f9495fa2aa 296 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 138 160 4.8E-37 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) AMIS_27600 eb4f6884558e50d577cc63f9495fa2aa 296 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 199 216 4.8E-37 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) AMIS_27600 eb4f6884558e50d577cc63f9495fa2aa 296 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 18 35 4.8E-37 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) AMIS_27600 eb4f6884558e50d577cc63f9495fa2aa 296 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 161 181 4.8E-37 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) AMIS_27600 eb4f6884558e50d577cc63f9495fa2aa 296 SUPERFAMILY SSF63829 13 289 3.27E-53 T 14-10-2018 AMIS_27600 eb4f6884558e50d577cc63f9495fa2aa 296 Gene3D G3DSA:2.120.10.30 4 293 4.9E-83 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AMIS_27600 eb4f6884558e50d577cc63f9495fa2aa 296 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 17 260 8.5E-61 T 14-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region AMIS_50520 3514dd53b0e9c57932d70c6a812ff33c 149 Gene3D G3DSA:3.10.450.50 10 147 8.2E-18 T 14-10-2018 AMIS_50520 3514dd53b0e9c57932d70c6a812ff33c 149 SUPERFAMILY SSF54427 8 142 1.86E-23 T 14-10-2018 IPR032710 NTF2-like domain superfamily AMIS_50520 3514dd53b0e9c57932d70c6a812ff33c 149 Pfam PF13577 SnoaL-like domain 11 127 5.7E-10 T 14-10-2018 IPR037401 SnoaL-like domain AMIS_11360 584844b3bf06594db2dfc3f74dd5f5e8 224 SMART SM00563 36 155 5.3E-26 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AMIS_11360 584844b3bf06594db2dfc3f74dd5f5e8 224 SUPERFAMILY SSF69593 7 219 1.22E-48 T 14-10-2018 AMIS_11360 584844b3bf06594db2dfc3f74dd5f5e8 224 Pfam PF01553 Acyltransferase 22 152 2.3E-22 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AMIS_60360 c22998ea0d33b8dbea8bca824410b1de 216 TIGRFAM TIGR00017 cmk: cytidylate kinase 2 208 7.4E-61 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 AMIS_60360 c22998ea0d33b8dbea8bca824410b1de 216 Gene3D G3DSA:3.40.50.300 1 215 3.1E-74 T 14-10-2018 AMIS_60360 c22998ea0d33b8dbea8bca824410b1de 216 Pfam PF02224 Cytidylate kinase 2 210 1.1E-64 T 14-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 AMIS_60360 c22998ea0d33b8dbea8bca824410b1de 216 SUPERFAMILY SSF52540 1 213 1.2E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_60360 c22998ea0d33b8dbea8bca824410b1de 216 Hamap MF_00238 Cytidylate kinase [cmk]. 1 214 27.6 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 AMIS_4470 9e3932d4652b78efb2b97edb5ed21ced 521 Gene3D G3DSA:1.20.1740.10 22 459 2.5E-20 T 14-10-2018 AMIS_4470 9e3932d4652b78efb2b97edb5ed21ced 521 PIRSF PIRSF006060 11 488 3.2E-32 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AMIS_4470 9e3932d4652b78efb2b97edb5ed21ced 521 Pfam PF00324 Amino acid permease 32 408 1.2E-7 T 14-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 AMIS_43320 d960c3434f6ad603c643169c0d609633 535 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 336 501 1.1E-32 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_43320 d960c3434f6ad603c643169c0d609633 535 Gene3D G3DSA:1.10.287.950 220 535 8.5E-62 T 14-10-2018 AMIS_43320 d960c3434f6ad603c643169c0d609633 535 SMART SM00283 280 534 7.2E-49 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_43320 d960c3434f6ad603c643169c0d609633 535 SUPERFAMILY SSF58104 240 533 6.93E-61 T 14-10-2018 AMIS_43320 d960c3434f6ad603c643169c0d609633 535 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 455 484 4.3E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_43320 d960c3434f6ad603c643169c0d609633 535 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 378 405 4.3E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_43320 d960c3434f6ad603c643169c0d609633 535 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 14 39 4.3E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_43320 d960c3434f6ad603c643169c0d609633 535 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 301 330 4.3E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_43320 d960c3434f6ad603c643169c0d609633 535 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 70 85 4.3E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_43320 d960c3434f6ad603c643169c0d609633 535 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 407 436 4.3E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_43320 d960c3434f6ad603c643169c0d609633 535 SMART SM00304 408 465 83.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_43320 d960c3434f6ad603c643169c0d609633 535 SMART SM00304 220 272 1.3E-4 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_43320 d960c3434f6ad603c643169c0d609633 535 Pfam PF02203 Tar ligand binding domain homologue 12 180 1.4E-19 T 14-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 AMIS_8730 76399dd81a68932063d11e57e3675a86 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 228 3.7E-27 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_8730 76399dd81a68932063d11e57e3675a86 232 SUPERFAMILY SSF46894 138 228 5.95E-29 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_8730 76399dd81a68932063d11e57e3675a86 232 SUPERFAMILY SSF52172 4 128 1.25E-42 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_8730 76399dd81a68932063d11e57e3675a86 232 Pfam PF00072 Response regulator receiver domain 8 116 3.3E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_8730 76399dd81a68932063d11e57e3675a86 232 Gene3D G3DSA:3.40.50.2300 2 129 1.1E-38 T 14-10-2018 AMIS_8730 76399dd81a68932063d11e57e3675a86 232 SMART SM00448 6 116 5.1E-44 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_8730 76399dd81a68932063d11e57e3675a86 232 SMART SM00862 153 229 4.8E-27 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_8730 76399dd81a68932063d11e57e3675a86 232 Gene3D G3DSA:1.10.10.10 137 232 3.2E-38 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_60210 8e8cf681b9db08ab0eb73f7f7bc1a58e 321 PIRSF PIRSF000654 27 273 3.3E-20 T 14-10-2018 AMIS_60210 8e8cf681b9db08ab0eb73f7f7bc1a58e 321 Pfam PF00069 Protein kinase domain 21 266 2.8E-42 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMIS_60210 8e8cf681b9db08ab0eb73f7f7bc1a58e 321 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 132 144 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 AMIS_60210 8e8cf681b9db08ab0eb73f7f7bc1a58e 321 Gene3D G3DSA:3.30.200.20 1 91 1.2E-21 T 14-10-2018 AMIS_60210 8e8cf681b9db08ab0eb73f7f7bc1a58e 321 Gene3D G3DSA:1.10.510.10 94 279 3.9E-46 T 14-10-2018 AMIS_60210 8e8cf681b9db08ab0eb73f7f7bc1a58e 321 SMART SM00220 11 276 1.6E-46 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMIS_60210 8e8cf681b9db08ab0eb73f7f7bc1a58e 321 SUPERFAMILY SSF56112 11 282 1.3E-64 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMIS_37650 e33cb3bf78aab27f09b35b3226e07766 464 SUPERFAMILY SSF53383 21 457 3.34E-123 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_37650 e33cb3bf78aab27f09b35b3226e07766 464 PIRSF PIRSF000521 39 410 6.7E-24 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMIS_37650 e33cb3bf78aab27f09b35b3226e07766 464 Gene3D G3DSA:3.40.640.10 74 349 1.6E-156 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_37650 e33cb3bf78aab27f09b35b3226e07766 464 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 262 299 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMIS_37650 e33cb3bf78aab27f09b35b3226e07766 464 Pfam PF00202 Aminotransferase class-III 40 455 3.5E-96 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMIS_37650 e33cb3bf78aab27f09b35b3226e07766 464 Gene3D G3DSA:3.90.1150.10 21 455 1.6E-156 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMIS_35640 576e1eb3528594be970a3b0ce3ced640 118 SUPERFAMILY SSF54593 1 116 6.34E-16 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_35640 576e1eb3528594be970a3b0ce3ced640 118 Gene3D G3DSA:3.10.180.10 1 118 6.7E-29 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_29670 1461f03109b5b711971957327cd4ff0f 229 SUPERFAMILY SSF53474 6 222 2.61E-27 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_29670 1461f03109b5b711971957327cd4ff0f 229 Pfam PF12697 Alpha/beta hydrolase family 7 218 2.9E-17 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_29670 1461f03109b5b711971957327cd4ff0f 229 Gene3D G3DSA:3.40.50.1820 3 225 6.6E-35 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_59700 51509449849c4c623a4ea5ff768f9441 248 SMART SM00382 29 220 1.4E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_59700 51509449849c4c623a4ea5ff768f9441 248 SUPERFAMILY SSF52540 3 243 4.24E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_59700 51509449849c4c623a4ea5ff768f9441 248 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 222 243 1.5E-10 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AMIS_59700 51509449849c4c623a4ea5ff768f9441 248 Gene3D G3DSA:3.40.50.300 1 244 3.9E-58 T 14-10-2018 AMIS_59700 51509449849c4c623a4ea5ff768f9441 248 Pfam PF00005 ABC transporter 22 172 2.1E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_60750 e1327b93e36e244e8c895e69a7204a9a 162 Pfam PF02441 Flavoprotein 4 143 1.5E-16 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AMIS_60750 e1327b93e36e244e8c895e69a7204a9a 162 Gene3D G3DSA:3.40.50.1950 2 149 9.6E-19 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 AMIS_60750 e1327b93e36e244e8c895e69a7204a9a 162 SUPERFAMILY SSF52507 3 145 1.83E-22 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 AMIS_63600 172c99f4a579237bbf05cf9012334daf 112 SUPERFAMILY SSF54593 35 101 4.34E-7 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_63600 172c99f4a579237bbf05cf9012334daf 112 Gene3D G3DSA:3.10.180.10 34 106 6.6E-13 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_62190 b40715af10c05981750d3c6fce50ba68 162 Pfam PF01381 Helix-turn-helix 13 69 9.4E-9 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMIS_62190 b40715af10c05981750d3c6fce50ba68 162 Gene3D G3DSA:1.10.260.40 1 71 2.8E-33 T 14-10-2018 AMIS_62190 b40715af10c05981750d3c6fce50ba68 162 Gene3D G3DSA:1.10.10.1930 75 162 2.1E-31 T 14-10-2018 IPR038099 BldD-like, C-terminal domain superfamily AMIS_62190 b40715af10c05981750d3c6fce50ba68 162 SUPERFAMILY SSF47413 3 71 1.52E-9 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_62190 b40715af10c05981750d3c6fce50ba68 162 SMART SM00530 12 69 6.8E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMIS_31610 888fe0168796d0787baaee6fec55556f 186 SUPERFAMILY SSF53597 5 184 4.35E-25 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AMIS_31610 888fe0168796d0787baaee6fec55556f 186 Pfam PF01872 RibD C-terminal domain 9 178 1.2E-19 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 AMIS_31610 888fe0168796d0787baaee6fec55556f 186 Gene3D G3DSA:3.40.430.10 8 184 3.0E-32 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AMIS_16790 2402f3255520cbe16e1bbdf73eacbd28 348 SUPERFAMILY SSF103481 95 179 5.75E-6 T 14-10-2018 AMIS_16790 2402f3255520cbe16e1bbdf73eacbd28 348 SUPERFAMILY SSF103481 230 321 4.84E-8 T 14-10-2018 AMIS_16790 2402f3255520cbe16e1bbdf73eacbd28 348 Pfam PF00892 EamA-like transporter family 185 318 8.9E-9 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMIS_55120 4964a951e4fa5e75821515098294047e 466 Gene3D G3DSA:1.10.2020.10 44 144 1.4E-128 T 14-10-2018 AMIS_55120 4964a951e4fa5e75821515098294047e 466 Gene3D G3DSA:3.20.20.140 13 450 1.4E-128 T 14-10-2018 AMIS_55120 4964a951e4fa5e75821515098294047e 466 SUPERFAMILY SSF51556 12 462 2.41E-148 T 14-10-2018 IPR032466 Metal-dependent hydrolase AMIS_55120 4964a951e4fa5e75821515098294047e 466 Pfam PF02614 Glucuronate isomerase 11 461 4.8E-72 T 14-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 AMIS_74590 6178d35dde36e200bebdcb1b2b236b63 211 SUPERFAMILY SSF56281 4 183 1.05E-21 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMIS_74590 6178d35dde36e200bebdcb1b2b236b63 211 SMART SM00849 7 177 1.4E-8 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMIS_74590 6178d35dde36e200bebdcb1b2b236b63 211 Gene3D G3DSA:3.60.15.10 1 191 2.4E-26 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMIS_74590 6178d35dde36e200bebdcb1b2b236b63 211 Pfam PF13483 Beta-lactamase superfamily domain 2 172 4.6E-18 T 14-10-2018 AMIS_10880 616e594c2fb4d9fe8a4ce44644262dc9 402 SUPERFAMILY SSF51735 1 106 7.35E-19 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_10880 616e594c2fb4d9fe8a4ce44644262dc9 402 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 159 394 8.8E-86 T 14-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AMIS_10880 616e594c2fb4d9fe8a4ce44644262dc9 402 PIRSF PIRSF036426 1 158 2.1E-32 T 14-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AMIS_10880 616e594c2fb4d9fe8a4ce44644262dc9 402 PIRSF PIRSF036426 136 401 5.0E-93 T 14-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AMIS_10880 616e594c2fb4d9fe8a4ce44644262dc9 402 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 159 370 5.5E-47 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 AMIS_10880 616e594c2fb4d9fe8a4ce44644262dc9 402 Pfam PF13241 Putative NAD(P)-binding 6 115 2.3E-21 T 14-10-2018 AMIS_10880 616e594c2fb4d9fe8a4ce44644262dc9 402 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 5 131 3.0E-23 T 14-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AMIS_10880 616e594c2fb4d9fe8a4ce44644262dc9 402 Gene3D G3DSA:3.40.50.720 3 130 1.0E-32 T 14-10-2018 AMIS_10880 616e594c2fb4d9fe8a4ce44644262dc9 402 Gene3D G3DSA:3.30.950.10 273 402 6.0E-48 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 AMIS_10880 616e594c2fb4d9fe8a4ce44644262dc9 402 SUPERFAMILY SSF53790 158 396 6.02E-73 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 AMIS_10880 616e594c2fb4d9fe8a4ce44644262dc9 402 Gene3D G3DSA:3.40.1010.10 157 272 2.0E-37 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 AMIS_52450 47b6080965fda51cd52d299f7e104344 355 Pfam PF01339 CheB methylesterase 166 345 2.1E-53 T 14-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AMIS_52450 47b6080965fda51cd52d299f7e104344 355 SMART SM00448 2 123 2.3E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_52450 47b6080965fda51cd52d299f7e104344 355 SUPERFAMILY SSF52738 163 349 2.22E-57 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal AMIS_52450 47b6080965fda51cd52d299f7e104344 355 Pfam PF00072 Response regulator receiver domain 4 107 1.2E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_52450 47b6080965fda51cd52d299f7e104344 355 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 2 350 32.561 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AMIS_52450 47b6080965fda51cd52d299f7e104344 355 Gene3D G3DSA:3.40.50.180 155 352 1.6E-61 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal AMIS_52450 47b6080965fda51cd52d299f7e104344 355 PIRSF PIRSF000876 1 353 1.1E-103 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AMIS_52450 47b6080965fda51cd52d299f7e104344 355 SUPERFAMILY SSF52172 1 108 9.39E-26 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_52450 47b6080965fda51cd52d299f7e104344 355 Gene3D G3DSA:3.40.50.2300 1 138 1.2E-26 T 14-10-2018 AMIS_21590 6e00889a14a0628b29581c506e1f8da9 334 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 133 6.1E-23 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMIS_21590 6e00889a14a0628b29581c506e1f8da9 334 Gene3D G3DSA:3.90.180.10 17 323 1.2E-82 T 14-10-2018 AMIS_21590 6e00889a14a0628b29581c506e1f8da9 334 Gene3D G3DSA:3.40.50.720 157 282 1.2E-82 T 14-10-2018 AMIS_21590 6e00889a14a0628b29581c506e1f8da9 334 SUPERFAMILY SSF50129 1 178 5.17E-40 T 14-10-2018 IPR011032 GroES-like superfamily AMIS_21590 6e00889a14a0628b29581c506e1f8da9 334 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 64 78 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AMIS_21590 6e00889a14a0628b29581c506e1f8da9 334 Pfam PF00107 Zinc-binding dehydrogenase 181 295 2.1E-11 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMIS_21590 6e00889a14a0628b29581c506e1f8da9 334 SUPERFAMILY SSF51735 141 301 3.05E-27 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_49330 f598e19d2fdf2a72c3ae4c4548d27a58 319 Gene3D G3DSA:3.40.50.300 19 281 6.2E-58 T 14-10-2018 AMIS_49330 f598e19d2fdf2a72c3ae4c4548d27a58 319 Pfam PF00005 ABC transporter 38 177 3.3E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_49330 f598e19d2fdf2a72c3ae4c4548d27a58 319 SMART SM00382 46 225 6.4E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_49330 f598e19d2fdf2a72c3ae4c4548d27a58 319 SUPERFAMILY SSF52540 21 238 4.49E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_36870 c60964cf50fc752d559927fc1bfaf756 261 PIRSF PIRSF017393 1 261 3.0E-84 T 14-10-2018 IPR006764 S-adenosyl-L-methionine dependent methyltransferase, SAV2177 type AMIS_36870 c60964cf50fc752d559927fc1bfaf756 261 Pfam PF04672 S-adenosyl methyltransferase 5 260 7.2E-81 T 14-10-2018 IPR006764 S-adenosyl-L-methionine dependent methyltransferase, SAV2177 type AMIS_36870 c60964cf50fc752d559927fc1bfaf756 261 SUPERFAMILY SSF53335 15 244 3.63E-40 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_36870 c60964cf50fc752d559927fc1bfaf756 261 Gene3D G3DSA:3.40.50.150 2 261 5.7E-93 T 14-10-2018 AMIS_69740 3a029fa0c04e42345ec8b8838342779c 244 Gene3D G3DSA:3.40.50.880 1 239 2.6E-62 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_69740 3a029fa0c04e42345ec8b8838342779c 244 SUPERFAMILY SSF52317 30 228 1.51E-39 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_69740 3a029fa0c04e42345ec8b8838342779c 244 Pfam PF07722 Peptidase C26 4 221 1.2E-52 T 14-10-2018 IPR011697 Peptidase C26 GO:0016787 Reactome: R-HSA-6798695 AMIS_53770 fd51f01bbe5b70759ea215677cd8379f 289 PIRSF PIRSF028754 5 287 5.4E-98 T 14-10-2018 IPR008492 Protein of unknown function DUF774 AMIS_53770 fd51f01bbe5b70759ea215677cd8379f 289 Pfam PF09754 PAC2 family 19 234 5.1E-49 T 14-10-2018 IPR019151 Proteasome assembly chaperone 2 AMIS_53770 fd51f01bbe5b70759ea215677cd8379f 289 Gene3D G3DSA:3.40.50.10900 13 217 6.6E-91 T 14-10-2018 IPR038389 Proteasome assembly chaperone 2 superfamily AMIS_53770 fd51f01bbe5b70759ea215677cd8379f 289 SUPERFAMILY SSF159659 4 254 5.89E-84 T 14-10-2018 AMIS_53770 fd51f01bbe5b70759ea215677cd8379f 289 Gene3D G3DSA:1.10.287.100 218 253 6.6E-91 T 14-10-2018 AMIS_49410 e4e459ab575f4e2214e9eac0bba36c96 372 Gene3D G3DSA:3.40.50.2300 144 366 4.4E-129 T 14-10-2018 AMIS_49410 e4e459ab575f4e2214e9eac0bba36c96 372 Gene3D G3DSA:3.40.50.2300 42 345 4.4E-129 T 14-10-2018 AMIS_49410 e4e459ab575f4e2214e9eac0bba36c96 372 SUPERFAMILY SSF53822 40 356 6.23E-68 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_49410 e4e459ab575f4e2214e9eac0bba36c96 372 Pfam PF13407 Periplasmic binding protein domain 42 323 9.0E-61 T 14-10-2018 IPR025997 Periplasmic binding protein AMIS_61130 1ee3a546fe1d962737382f27c84ac719 147 Gene3D G3DSA:3.40.930.10 2 141 4.6E-35 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AMIS_61130 1ee3a546fe1d962737382f27c84ac719 147 SUPERFAMILY SSF55804 3 140 2.09E-36 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AMIS_61130 1ee3a546fe1d962737382f27c84ac719 147 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 3 139 8.6E-33 T 14-10-2018 IPR002178 PTS EIIA type-2 domain AMIS_61130 1ee3a546fe1d962737382f27c84ac719 147 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 48 64 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain AMIS_54520 51790feb453203a5410d1666c64ad69c 155 SUPERFAMILY SSF50475 14 140 2.9E-32 T 14-10-2018 AMIS_54520 51790feb453203a5410d1666c64ad69c 155 Gene3D G3DSA:2.30.110.10 8 142 4.8E-38 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AMIS_54520 51790feb453203a5410d1666c64ad69c 155 TIGRFAM TIGR03618 Rv1155_F420: PPOX class probable F420-dependent enzyme 17 141 3.9E-40 T 14-10-2018 IPR019920 F420-binding domain, putative AMIS_54520 51790feb453203a5410d1666c64ad69c 155 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 14 96 4.0E-15 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AMIS_70310 e1bcd9264bd971c6991e0e0fcf2deb64 464 SUPERFAMILY SSF50998 104 412 1.73E-11 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AMIS_70310 e1bcd9264bd971c6991e0e0fcf2deb64 464 Pfam PF13360 PQQ-like domain 111 275 3.3E-11 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat AMIS_70310 e1bcd9264bd971c6991e0e0fcf2deb64 464 Gene3D G3DSA:2.130.10.10 44 315 1.4E-14 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_26030 7333f5d7c6cb6df676b2c26309eb39f2 289 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 234 275 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AMIS_26030 7333f5d7c6cb6df676b2c26309eb39f2 289 SUPERFAMILY SSF46689 233 279 8.24E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_26030 7333f5d7c6cb6df676b2c26309eb39f2 289 Gene3D G3DSA:1.10.10.60 233 281 3.1E-11 T 14-10-2018 AMIS_26030 7333f5d7c6cb6df676b2c26309eb39f2 289 Gene3D G3DSA:1.10.10.60 185 232 2.0E-8 T 14-10-2018 AMIS_26030 7333f5d7c6cb6df676b2c26309eb39f2 289 Pfam PF12852 Cupin 5 162 3.5E-24 T 14-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain AMIS_26030 7333f5d7c6cb6df676b2c26309eb39f2 289 Pfam PF12833 Helix-turn-helix domain 203 280 4.6E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMIS_26030 7333f5d7c6cb6df676b2c26309eb39f2 289 SMART SM00342 197 279 7.1E-24 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMIS_26030 7333f5d7c6cb6df676b2c26309eb39f2 289 SUPERFAMILY SSF46689 180 231 1.9E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_23310 adb66357eb98eeeff8175246377b1645 811 SUPERFAMILY SSF53187 68 273 8.27E-35 T 14-10-2018 AMIS_23310 adb66357eb98eeeff8175246377b1645 811 SUPERFAMILY SSF52317 612 809 3.62E-7 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_23310 adb66357eb98eeeff8175246377b1645 811 SMART SM00631 68 304 0.0022 T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 AMIS_23310 adb66357eb98eeeff8175246377b1645 811 Pfam PF00246 Zinc carboxypeptidase 76 213 3.3E-16 T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 AMIS_23310 adb66357eb98eeeff8175246377b1645 811 Gene3D G3DSA:3.40.630.10 64 275 1.2E-30 T 14-10-2018 AMIS_53860 f0d3cd280b26a99d5db91bd2e54167c7 330 SUPERFAMILY SSF46689 4 109 7.35E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_53860 f0d3cd280b26a99d5db91bd2e54167c7 330 Pfam PF00665 Integrase core domain 131 281 1.6E-40 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AMIS_53860 f0d3cd280b26a99d5db91bd2e54167c7 330 SUPERFAMILY SSF53098 183 324 5.69E-35 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily AMIS_53860 f0d3cd280b26a99d5db91bd2e54167c7 330 Gene3D G3DSA:3.30.420.10 175 324 4.4E-30 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMIS_53860 f0d3cd280b26a99d5db91bd2e54167c7 330 Pfam PF13011 leucine-zipper of insertion element IS481 1 83 1.4E-16 T 14-10-2018 IPR024967 DNA-binding domain, IS481-type AMIS_38980 8fd6d4a0c5e4eb338decffb14ddf26d3 292 SUPERFAMILY SSF51735 2 273 1.45E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_38980 8fd6d4a0c5e4eb338decffb14ddf26d3 292 Gene3D G3DSA:3.40.50.720 2 282 2.6E-41 T 14-10-2018 AMIS_38980 8fd6d4a0c5e4eb338decffb14ddf26d3 292 Pfam PF13460 NAD(P)H-binding 7 152 6.4E-10 T 14-10-2018 IPR016040 NAD(P)-binding domain AMIS_39950 24b23f0e92ff5acd8db4261f20edb620 93 Gene3D G3DSA:2.60.120.260 1 92 2.4E-20 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_39950 24b23f0e92ff5acd8db4261f20edb620 93 SUPERFAMILY SSF49785 1 92 7.14E-11 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_50590 f885565224e09d4c924b0378b2b27c4a 374 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 16 367 3.7E-113 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AMIS_50590 f885565224e09d4c924b0378b2b27c4a 374 PIRSF PIRSF000390 5 373 1.1E-100 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AMIS_50590 f885565224e09d4c924b0378b2b27c4a 374 Gene3D G3DSA:3.90.1150.10 248 373 7.5E-33 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMIS_50590 f885565224e09d4c924b0378b2b27c4a 374 Gene3D G3DSA:3.40.640.10 3 245 8.0E-83 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_50590 f885565224e09d4c924b0378b2b27c4a 374 SUPERFAMILY SSF53383 15 371 4.81E-99 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_48370 c2fd33dc2936ca081d8875b27cce88f2 116 Pfam PF01740 STAS domain 10 102 1.8E-15 T 14-10-2018 IPR002645 STAS domain AMIS_48370 c2fd33dc2936ca081d8875b27cce88f2 116 Gene3D G3DSA:3.30.750.24 5 106 4.7E-25 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_48370 c2fd33dc2936ca081d8875b27cce88f2 116 SUPERFAMILY SSF52091 10 104 2.75E-22 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_48370 c2fd33dc2936ca081d8875b27cce88f2 116 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 7 102 1.4E-21 T 14-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 AMIS_58040 716bab30a8be0746c49d50e972f5d62b 416 PRINTS PR01988 Putative bacilysin exporter bacE signature 7 29 7.6E-6 T 14-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 AMIS_58040 716bab30a8be0746c49d50e972f5d62b 416 PRINTS PR01988 Putative bacilysin exporter bacE signature 297 320 7.6E-6 T 14-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 AMIS_58040 716bab30a8be0746c49d50e972f5d62b 416 PRINTS PR01988 Putative bacilysin exporter bacE signature 137 158 7.6E-6 T 14-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 AMIS_58040 716bab30a8be0746c49d50e972f5d62b 416 PRINTS PR01988 Putative bacilysin exporter bacE signature 164 181 7.6E-6 T 14-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 AMIS_58040 716bab30a8be0746c49d50e972f5d62b 416 Pfam PF07690 Major Facilitator Superfamily 9 319 3.5E-17 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_58040 716bab30a8be0746c49d50e972f5d62b 416 SUPERFAMILY SSF103473 5 394 8.89E-35 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_58040 716bab30a8be0746c49d50e972f5d62b 416 Gene3D G3DSA:1.20.1250.20 3 391 4.4E-29 T 14-10-2018 AMIS_65670 4316c7da1ed6ff81e3762464d30c3a08 214 Gene3D G3DSA:3.20.20.70 10 214 1.6E-62 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_65670 4316c7da1ed6ff81e3762464d30c3a08 214 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 128 141 - T 14-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AMIS_65670 4316c7da1ed6ff81e3762464d30c3a08 214 SUPERFAMILY SSF51569 15 205 8.42E-52 T 14-10-2018 AMIS_65670 4316c7da1ed6ff81e3762464d30c3a08 214 Pfam PF01081 KDPG and KHG aldolase 18 186 1.4E-34 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AMIS_23260 e3251e9d09058766c495d90b518dbbee 339 SUPERFAMILY SSF63829 35 276 6.54E-9 T 14-10-2018 AMIS_52470 3adaec51558d6d92cc6ab1411358bb73 776 SUPERFAMILY SSF55846 277 472 4.17E-37 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AMIS_52470 3adaec51558d6d92cc6ab1411358bb73 776 Gene3D G3DSA:3.40.80.10 274 479 2.1E-45 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AMIS_52470 3adaec51558d6d92cc6ab1411358bb73 776 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 300 460 1.9E-11 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AMIS_52470 3adaec51558d6d92cc6ab1411358bb73 776 SMART SM00701 277 432 1.1E-21 T 14-10-2018 IPR006619 Peptidoglycan recognition protein family domain, metazoa/bacteria GO:0008270|GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AMIS_52470 3adaec51558d6d92cc6ab1411358bb73 776 Gene3D G3DSA:2.60.120.260 663 762 1.1E-7 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_59270 11df1916d214646320016855d4539a6f 225 Gene3D G3DSA:3.30.70.3040 114 214 7.7E-17 T 14-10-2018 AMIS_41310 8eec091c0b48869889bd9e5f4890aafa 287 Gene3D G3DSA:1.10.1740.10 3 86 1.0E-19 T 14-10-2018 AMIS_41310 8eec091c0b48869889bd9e5f4890aafa 287 Pfam PF04545 Sigma-70, region 4 184 229 8.0E-12 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 AMIS_41310 8eec091c0b48869889bd9e5f4890aafa 287 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 13 230 6.5E-24 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_41310 8eec091c0b48869889bd9e5f4890aafa 287 PIRSF PIRSF000770 2 253 5.9E-57 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMIS_41310 8eec091c0b48869889bd9e5f4890aafa 287 Pfam PF04539 Sigma-70 region 3 103 167 4.4E-8 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 AMIS_41310 8eec091c0b48869889bd9e5f4890aafa 287 SUPERFAMILY SSF88946 12 88 2.83E-17 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_41310 8eec091c0b48869889bd9e5f4890aafa 287 Pfam PF04542 Sigma-70 region 2 16 88 3.7E-8 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_41310 8eec091c0b48869889bd9e5f4890aafa 287 PRINTS PR00046 Major sigma-70 factor signature 43 56 2.6E-5 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMIS_41310 8eec091c0b48869889bd9e5f4890aafa 287 PRINTS PR00046 Major sigma-70 factor signature 217 228 2.6E-5 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMIS_41310 8eec091c0b48869889bd9e5f4890aafa 287 PRINTS PR00046 Major sigma-70 factor signature 185 197 2.6E-5 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMIS_41310 8eec091c0b48869889bd9e5f4890aafa 287 PRINTS PR00046 Major sigma-70 factor signature 202 217 2.6E-5 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMIS_41310 8eec091c0b48869889bd9e5f4890aafa 287 SUPERFAMILY SSF88659 90 156 1.66E-10 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_41310 8eec091c0b48869889bd9e5f4890aafa 287 SUPERFAMILY SSF88659 155 233 2.99E-16 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_41310 8eec091c0b48869889bd9e5f4890aafa 287 Gene3D G3DSA:1.20.140.160 87 235 4.0E-34 T 14-10-2018 AMIS_56580 9a7c7f3aa323322b94c6f571aff45ff4 210 SUPERFAMILY SSF46689 3 81 1.13E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_56580 9a7c7f3aa323322b94c6f571aff45ff4 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 58 2.2E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_56580 9a7c7f3aa323322b94c6f571aff45ff4 210 Gene3D G3DSA:1.10.357.10 2 156 2.0E-19 T 14-10-2018 AMIS_6390 276f7f09f2dfb9f42cb7db1d3742d81b 335 SUPERFAMILY SSF54373 190 279 1.44E-17 T 14-10-2018 AMIS_6390 276f7f09f2dfb9f42cb7db1d3742d81b 335 Pfam PF01266 FAD dependent oxidoreductase 2 317 4.0E-56 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AMIS_6390 276f7f09f2dfb9f42cb7db1d3742d81b 335 SUPERFAMILY SSF51905 1 335 1.81E-31 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_6390 276f7f09f2dfb9f42cb7db1d3742d81b 335 Gene3D G3DSA:3.50.50.60 3 318 5.4E-69 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_6390 276f7f09f2dfb9f42cb7db1d3742d81b 335 Gene3D G3DSA:3.30.9.10 85 279 5.4E-69 T 14-10-2018 AMIS_6390 276f7f09f2dfb9f42cb7db1d3742d81b 335 TIGRFAM TIGR02352 thiamin_ThiO: glycine oxidase ThiO 3 320 2.9E-84 T 14-10-2018 IPR012727 Glycine oxidase ThiO GO:0016491|GO:0050660 KEGG: 00730+1.4.3.19|MetaCyc: PWY-7396|MetaCyc: PWY-7806 AMIS_67950 350305cd5076e0bac32475139280cce7 244 Pfam PF01872 RibD C-terminal domain 25 226 2.1E-35 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 AMIS_67950 350305cd5076e0bac32475139280cce7 244 Gene3D G3DSA:3.40.430.10 5 238 1.5E-63 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AMIS_67950 350305cd5076e0bac32475139280cce7 244 SUPERFAMILY SSF53597 25 237 1.44E-40 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AMIS_24000 82eaef189e3fc01a121c0b8c353f1876 335 PIRSF PIRSF005096 1 335 2.8E-125 T 14-10-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 AMIS_24000 82eaef189e3fc01a121c0b8c353f1876 335 SUPERFAMILY SSF74650 4 332 1.26E-116 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 AMIS_24000 82eaef189e3fc01a121c0b8c353f1876 335 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 159 168 - T 14-10-2018 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 AMIS_24000 82eaef189e3fc01a121c0b8c353f1876 335 Pfam PF01263 Aldose 1-epimerase 4 331 5.7E-94 T 14-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 AMIS_24000 82eaef189e3fc01a121c0b8c353f1876 335 Gene3D G3DSA:2.70.98.10 1 335 8.7E-127 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AMIS_9710 802ab5b9c3c71875713f132239828a0d 198 Hamap MF_00045 Oligoribonuclease [orn]. 2 182 38.97 T 14-10-2018 IPR022894 Oligoribonuclease GO:0000175 AMIS_9710 802ab5b9c3c71875713f132239828a0d 198 Pfam PF00929 Exonuclease 8 171 3.9E-30 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AMIS_9710 802ab5b9c3c71875713f132239828a0d 198 Gene3D G3DSA:3.30.420.10 2 183 5.9E-70 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMIS_9710 802ab5b9c3c71875713f132239828a0d 198 SUPERFAMILY SSF53098 6 180 2.07E-45 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily AMIS_9710 802ab5b9c3c71875713f132239828a0d 198 SMART SM00479 6 181 2.6E-28 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AMIS_30680 0d74181f501dee57568344b1fcba7575 390 Gene3D G3DSA:3.80.30.30 169 390 1.6E-64 T 14-10-2018 AMIS_30680 0d74181f501dee57568344b1fcba7575 390 Gene3D G3DSA:3.40.50.12110 40 153 5.6E-32 T 14-10-2018 AMIS_32400 7e275718daa353529aa533ac05be6562 474 Gene3D G3DSA:1.10.260.40 15 77 4.3E-15 T 14-10-2018 AMIS_32400 7e275718daa353529aa533ac05be6562 474 SUPERFAMILY SSF48452 217 352 3.64E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_32400 7e275718daa353529aa533ac05be6562 474 Gene3D G3DSA:1.25.40.10 209 461 4.6E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_32400 7e275718daa353529aa533ac05be6562 474 Gene3D G3DSA:1.25.40.10 86 206 3.3E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_32400 7e275718daa353529aa533ac05be6562 474 Pfam PF12844 Helix-turn-helix domain 19 78 5.7E-11 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMIS_32400 7e275718daa353529aa533ac05be6562 474 SUPERFAMILY SSF48452 90 437 3.57E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_32400 7e275718daa353529aa533ac05be6562 474 SUPERFAMILY SSF47413 16 80 1.97E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_32400 7e275718daa353529aa533ac05be6562 474 SMART SM00028 128 161 22.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_32400 7e275718daa353529aa533ac05be6562 474 SMART SM00028 409 442 120.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_32400 7e275718daa353529aa533ac05be6562 474 SMART SM00028 90 123 5.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_32400 7e275718daa353529aa533ac05be6562 474 SMART SM00530 21 75 2.8E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMIS_32400 7e275718daa353529aa533ac05be6562 474 Pfam PF13181 Tetratricopeptide repeat 410 436 0.12 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_68200 677cec549b0f7aa7266f428617d93273 134 SUPERFAMILY SSF51316 10 133 1.57E-53 T 14-10-2018 IPR011057 Mss4-like superfamily AMIS_68200 677cec549b0f7aa7266f428617d93273 134 Pfam PF01641 SelR domain 14 132 7.8E-49 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AMIS_68200 677cec549b0f7aa7266f428617d93273 134 Gene3D G3DSA:2.170.150.20 1 134 4.4E-52 T 14-10-2018 AMIS_68200 677cec549b0f7aa7266f428617d93273 134 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 11 131 3.6E-43 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AMIS_40900 bdf53417819b219ccd296003da71afec 309 Pfam PF10094 Uncharacterized protein conserved in bacteria (DUF2332) 7 307 4.3E-78 T 14-10-2018 IPR011200 Uncharacterised conserved protein UCP012608 AMIS_50880 9e7acdf1779d71b8a589cbd2cb2c7c62 303 Gene3D G3DSA:3.90.180.10 82 287 1.8E-26 T 14-10-2018 AMIS_50880 9e7acdf1779d71b8a589cbd2cb2c7c62 303 SUPERFAMILY SSF50129 1 133 2.25E-14 T 14-10-2018 IPR011032 GroES-like superfamily AMIS_50880 9e7acdf1779d71b8a589cbd2cb2c7c62 303 Gene3D G3DSA:3.40.50.720 112 236 1.8E-26 T 14-10-2018 AMIS_50880 9e7acdf1779d71b8a589cbd2cb2c7c62 303 SUPERFAMILY SSF51735 99 238 3.28E-19 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_50880 9e7acdf1779d71b8a589cbd2cb2c7c62 303 Gene3D G3DSA:3.90.180.10 1 80 9.7E-6 T 14-10-2018 AMIS_19690 872ca623715b1106227a50e7bc870da0 416 Gene3D G3DSA:3.40.50.300 103 328 1.0E-20 T 14-10-2018 AMIS_19690 872ca623715b1106227a50e7bc870da0 416 SUPERFAMILY SSF52540 108 308 2.76E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_19690 872ca623715b1106227a50e7bc870da0 416 SMART SM00382 110 367 1.1E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_19690 872ca623715b1106227a50e7bc870da0 416 Pfam PF13481 AAA domain 107 262 8.2E-15 T 14-10-2018 AMIS_72270 ba73ff5e62e961db26e2b37600ee525f 609 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 609 9.9E-230 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 AMIS_72270 ba73ff5e62e961db26e2b37600ee525f 609 Gene3D G3DSA:3.40.50.10490 445 594 4.0E-135 T 14-10-2018 AMIS_72270 ba73ff5e62e961db26e2b37600ee525f 609 Pfam PF01380 SIS domain 295 417 2.0E-33 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AMIS_72270 ba73ff5e62e961db26e2b37600ee525f 609 Pfam PF01380 SIS domain 460 591 1.3E-23 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AMIS_72270 ba73ff5e62e961db26e2b37600ee525f 609 SUPERFAMILY SSF56235 2 243 1.37E-60 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMIS_72270 ba73ff5e62e961db26e2b37600ee525f 609 Pfam PF13522 Glutamine amidotransferase domain 72 199 2.4E-19 T 14-10-2018 AMIS_72270 ba73ff5e62e961db26e2b37600ee525f 609 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 609 39.316 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 AMIS_72270 ba73ff5e62e961db26e2b37600ee525f 609 Gene3D G3DSA:3.40.50.10490 264 608 4.0E-135 T 14-10-2018 AMIS_72270 ba73ff5e62e961db26e2b37600ee525f 609 SUPERFAMILY SSF53697 260 609 1.02E-104 T 14-10-2018 AMIS_72270 ba73ff5e62e961db26e2b37600ee525f 609 Gene3D G3DSA:3.60.20.10 2 250 4.2E-67 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMIS_32510 124c2539f4ddc4d35e6e77ee991505b8 240 Gene3D G3DSA:1.25.10.10 1 137 3.7E-17 T 14-10-2018 IPR011989 Armadillo-like helical AMIS_32510 124c2539f4ddc4d35e6e77ee991505b8 240 SUPERFAMILY SSF48371 5 113 1.58E-16 T 14-10-2018 IPR016024 Armadillo-type fold AMIS_32510 124c2539f4ddc4d35e6e77ee991505b8 240 Pfam PF13646 HEAT repeats 40 111 1.1E-10 T 14-10-2018 AMIS_78190 4ad3e2c0720e87c20c6a4f2226d4f198 461 Gene3D G3DSA:3.90.226.10 5 460 1.3E-174 T 14-10-2018 AMIS_78190 4ad3e2c0720e87c20c6a4f2226d4f198 461 SUPERFAMILY SSF52096 24 263 1.74E-42 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMIS_78190 4ad3e2c0720e87c20c6a4f2226d4f198 461 Gene3D G3DSA:3.90.226.10 37 256 1.3E-174 T 14-10-2018 AMIS_78190 4ad3e2c0720e87c20c6a4f2226d4f198 461 Pfam PF01039 Carboxyl transferase domain 48 397 6.7E-52 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 AMIS_78190 4ad3e2c0720e87c20c6a4f2226d4f198 461 SUPERFAMILY SSF52096 229 448 2.24E-28 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMIS_880 77a5ab6d22d525a4890887176495a306 403 Gene3D G3DSA:1.20.1530.20 5 382 1.9E-56 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily AMIS_880 77a5ab6d22d525a4890887176495a306 403 Pfam PF00999 Sodium/hydrogen exchanger family 14 372 1.3E-48 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AMIS_1400 cd9f85637f98342d1878eb10d47fc3e6 226 ProDom PD120223 SCO3432 GENE ML2604 GP79 GP77 CGL2230 MB0190 8 226 2.0E-42 T 14-10-2018 AMIS_1400 cd9f85637f98342d1878eb10d47fc3e6 226 Pfam PF10979 Protein of unknown function (DUF2786) 7 46 3.4E-16 T 14-10-2018 IPR024498 Domain of unknown function DUF2786 AMIS_29620 1c9cf4be701c2e64a96c9ff9b6f1d665 317 Gene3D G3DSA:3.20.20.100 9 313 2.1E-63 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMIS_29620 1c9cf4be701c2e64a96c9ff9b6f1d665 317 SUPERFAMILY SSF51430 13 311 4.45E-58 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMIS_29620 1c9cf4be701c2e64a96c9ff9b6f1d665 317 Pfam PF00248 Aldo/keto reductase family 16 311 1.3E-47 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain AMIS_50450 a7ad9730946f43efc76e16def46fb29f 374 Gene3D G3DSA:3.40.47.10 209 368 4.5E-52 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_50450 a7ad9730946f43efc76e16def46fb29f 374 SUPERFAMILY SSF53901 41 368 2.77E-29 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_50450 a7ad9730946f43efc76e16def46fb29f 374 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 277 367 2.1E-18 T 14-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AMIS_50450 a7ad9730946f43efc76e16def46fb29f 374 Gene3D G3DSA:3.40.47.10 158 208 1.1E-14 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_50450 a7ad9730946f43efc76e16def46fb29f 374 Gene3D G3DSA:3.40.47.10 7 149 1.3E-40 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_7090 858059dbecef4bc28792404a8570f90a 335 Gene3D G3DSA:3.40.50.300 5 333 2.5E-104 T 14-10-2018 AMIS_7090 858059dbecef4bc28792404a8570f90a 335 SUPERFAMILY SSF52540 42 309 1.3E-77 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_7090 858059dbecef4bc28792404a8570f90a 335 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_7090 858059dbecef4bc28792404a8570f90a 335 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 235 325 8.5E-25 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMIS_7090 858059dbecef4bc28792404a8570f90a 335 Pfam PF00005 ABC transporter 34 185 3.8E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_7090 858059dbecef4bc28792404a8570f90a 335 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 304 3.6E-16 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMIS_7090 858059dbecef4bc28792404a8570f90a 335 SMART SM00382 42 235 1.7E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_50400 147137c65ef44f8d7d60b22e3ea2f856 315 TIGRFAM TIGR04098 biosyn_clust_1: biosynthesis cluster domain 19 307 1.5E-73 T 14-10-2018 AMIS_50400 147137c65ef44f8d7d60b22e3ea2f856 315 SUPERFAMILY SSF54637 216 284 3.17E-5 T 14-10-2018 IPR029069 HotDog domain superfamily AMIS_50400 147137c65ef44f8d7d60b22e3ea2f856 315 Gene3D G3DSA:3.10.129.10 9 315 2.6E-107 T 14-10-2018 AMIS_8890 b22f1b7c2945d1c1713e0aa3c44dc8b3 158 ProSitePatterns PS01317 SsrA-binding protein. 28 40 - T 14-10-2018 IPR020081 SsrA-binding protein, conserved site AMIS_8890 b22f1b7c2945d1c1713e0aa3c44dc8b3 158 TIGRFAM TIGR00086 smpB: SsrA-binding protein 10 150 1.8E-56 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 AMIS_8890 b22f1b7c2945d1c1713e0aa3c44dc8b3 158 Pfam PF01668 SmpB protein 10 150 1.1E-59 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 AMIS_8890 b22f1b7c2945d1c1713e0aa3c44dc8b3 158 SUPERFAMILY SSF74982 4 133 1.7E-51 T 14-10-2018 IPR023620 Small protein B AMIS_8890 b22f1b7c2945d1c1713e0aa3c44dc8b3 158 Gene3D G3DSA:2.40.280.10 3 129 8.0E-49 T 14-10-2018 IPR023620 Small protein B AMIS_8890 b22f1b7c2945d1c1713e0aa3c44dc8b3 158 Hamap MF_00023 SsrA-binding protein [smpB]. 1 156 72.385 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 AMIS_8890 b22f1b7c2945d1c1713e0aa3c44dc8b3 158 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 10 133 6.0E-46 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 AMIS_1740 8728c2fd4e1608742b77c7ff545b8213 228 Pfam PF00005 ABC transporter 21 169 2.8E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_1740 8728c2fd4e1608742b77c7ff545b8213 228 Gene3D G3DSA:3.40.50.300 3 223 3.7E-62 T 14-10-2018 AMIS_1740 8728c2fd4e1608742b77c7ff545b8213 228 SMART SM00382 30 218 4.1E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_1740 8728c2fd4e1608742b77c7ff545b8213 228 SUPERFAMILY SSF52540 5 220 1.43E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_29200 81b96a4525b475d5dda9d73c6df30409 191 Gene3D G3DSA:2.60.40.1890 61 172 8.8E-31 T 14-10-2018 IPR036182 Copper chaperone PCuAC superfamily AMIS_29200 81b96a4525b475d5dda9d73c6df30409 191 SUPERFAMILY SSF110087 45 172 6.28E-38 T 14-10-2018 IPR036182 Copper chaperone PCuAC superfamily AMIS_29200 81b96a4525b475d5dda9d73c6df30409 191 Pfam PF04314 Copper chaperone PCu(A)C 57 163 3.5E-33 T 14-10-2018 IPR007410 Copper chaperone PCuAC AMIS_17230 76797f0251429a95932c5de1bb65f0c2 582 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 30 532 1.3E-210 T 14-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 AMIS_17230 76797f0251429a95932c5de1bb65f0c2 582 PRINTS PR01165 Cytochrome c oxidase subunit I signature 436 457 6.2E-94 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_17230 76797f0251429a95932c5de1bb65f0c2 582 PRINTS PR01165 Cytochrome c oxidase subunit I signature 176 194 6.2E-94 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_17230 76797f0251429a95932c5de1bb65f0c2 582 PRINTS PR01165 Cytochrome c oxidase subunit I signature 205 224 6.2E-94 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_17230 76797f0251429a95932c5de1bb65f0c2 582 PRINTS PR01165 Cytochrome c oxidase subunit I signature 301 316 6.2E-94 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_17230 76797f0251429a95932c5de1bb65f0c2 582 PRINTS PR01165 Cytochrome c oxidase subunit I signature 74 97 6.2E-94 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_17230 76797f0251429a95932c5de1bb65f0c2 582 PRINTS PR01165 Cytochrome c oxidase subunit I signature 386 405 6.2E-94 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_17230 76797f0251429a95932c5de1bb65f0c2 582 PRINTS PR01165 Cytochrome c oxidase subunit I signature 144 156 6.2E-94 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_17230 76797f0251429a95932c5de1bb65f0c2 582 PRINTS PR01165 Cytochrome c oxidase subunit I signature 358 376 6.2E-94 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_17230 76797f0251429a95932c5de1bb65f0c2 582 PRINTS PR01165 Cytochrome c oxidase subunit I signature 27 52 6.2E-94 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_17230 76797f0251429a95932c5de1bb65f0c2 582 PRINTS PR01165 Cytochrome c oxidase subunit I signature 101 125 6.2E-94 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_17230 76797f0251429a95932c5de1bb65f0c2 582 PRINTS PR01165 Cytochrome c oxidase subunit I signature 323 344 6.2E-94 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_17230 76797f0251429a95932c5de1bb65f0c2 582 PRINTS PR01165 Cytochrome c oxidase subunit I signature 255 276 6.2E-94 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_17230 76797f0251429a95932c5de1bb65f0c2 582 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 257 311 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_17230 76797f0251429a95932c5de1bb65f0c2 582 Gene3D G3DSA:1.20.210.10 16 541 1.2E-201 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_17230 76797f0251429a95932c5de1bb65f0c2 582 SUPERFAMILY SSF81442 24 535 3.14E-170 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_17230 76797f0251429a95932c5de1bb65f0c2 582 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 36 480 2.0E-148 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_30760 7802b24a9f10306d1fb4938de8a5a605 218 Gene3D G3DSA:1.10.3290.10 27 195 1.6E-7 T 14-10-2018 IPR036597 Fido-like domain superfamily AMIS_30760 7802b24a9f10306d1fb4938de8a5a605 218 SUPERFAMILY SSF140931 87 165 1.31E-6 T 14-10-2018 IPR036597 Fido-like domain superfamily AMIS_30760 7802b24a9f10306d1fb4938de8a5a605 218 Pfam PF02661 Fic/DOC family 95 159 2.5E-4 T 14-10-2018 IPR003812 Fido domain AMIS_30950 9477b798ac00d89def2122fbb8a063c5 256 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_30950 9477b798ac00d89def2122fbb8a063c5 256 Gene3D G3DSA:3.40.50.300 1 249 5.7E-65 T 14-10-2018 AMIS_30950 9477b798ac00d89def2122fbb8a063c5 256 SMART SM00382 30 211 1.1E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_30950 9477b798ac00d89def2122fbb8a063c5 256 SUPERFAMILY SSF52540 1 228 1.16E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_30950 9477b798ac00d89def2122fbb8a063c5 256 Pfam PF00005 ABC transporter 21 160 2.7E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_59240 6c316687f5dc24fbd169ee65550e77d4 179 ProDom PD016028 PROTEASE METALLOPROTEASE EXTRACELLULAR NEUTRAL SMALL METAL-BINDING ZINC HYDROLASE SNAPALYSIN ZYMOGEN 39 157 2.0E-33 T 14-10-2018 IPR000013 Peptidase M7, snapalysin GO:0004222|GO:0005576|GO:0006508|GO:0008270 AMIS_59240 6c316687f5dc24fbd169ee65550e77d4 179 PRINTS PR00787 Streptomyces extracellular neutral proteinase (M7) family signature 122 146 2.4E-21 T 14-10-2018 IPR000013 Peptidase M7, snapalysin GO:0004222|GO:0005576|GO:0006508|GO:0008270 AMIS_59240 6c316687f5dc24fbd169ee65550e77d4 179 PRINTS PR00787 Streptomyces extracellular neutral proteinase (M7) family signature 97 121 2.4E-21 T 14-10-2018 IPR000013 Peptidase M7, snapalysin GO:0004222|GO:0005576|GO:0006508|GO:0008270 AMIS_59240 6c316687f5dc24fbd169ee65550e77d4 179 PRINTS PR00787 Streptomyces extracellular neutral proteinase (M7) family signature 38 64 2.4E-21 T 14-10-2018 IPR000013 Peptidase M7, snapalysin GO:0004222|GO:0005576|GO:0006508|GO:0008270 AMIS_59240 6c316687f5dc24fbd169ee65550e77d4 179 PRINTS PR00787 Streptomyces extracellular neutral proteinase (M7) family signature 149 163 2.4E-21 T 14-10-2018 IPR000013 Peptidase M7, snapalysin GO:0004222|GO:0005576|GO:0006508|GO:0008270 AMIS_59240 6c316687f5dc24fbd169ee65550e77d4 179 Gene3D G3DSA:3.40.390.10 32 164 4.0E-37 T 14-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 AMIS_59240 6c316687f5dc24fbd169ee65550e77d4 179 SUPERFAMILY SSF55486 32 156 5.24E-21 T 14-10-2018 AMIS_59240 6c316687f5dc24fbd169ee65550e77d4 179 Pfam PF02031 Streptomyces extracellular neutral proteinase (M7) family 34 162 3.7E-28 T 14-10-2018 IPR000013 Peptidase M7, snapalysin GO:0004222|GO:0005576|GO:0006508|GO:0008270 AMIS_23800 d3023a3149495591e0c215ea4108bfe9 426 Pfam PF07519 Tannase and feruloyl esterase 100 218 3.3E-10 T 14-10-2018 IPR011118 Tannase/feruloyl esterase MetaCyc: PWY-6784 AMIS_23800 d3023a3149495591e0c215ea4108bfe9 426 SUPERFAMILY SSF53474 116 375 6.64E-10 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_36190 4767c7ddec86d013b7b9f20f2be968dd 207 Pfam PF01380 SIS domain 53 171 2.8E-12 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AMIS_36190 4767c7ddec86d013b7b9f20f2be968dd 207 Gene3D G3DSA:3.40.50.10490 19 201 3.4E-22 T 14-10-2018 AMIS_36190 4767c7ddec86d013b7b9f20f2be968dd 207 SUPERFAMILY SSF53697 34 180 1.03E-16 T 14-10-2018 AMIS_46710 7db5c8c5379a32dc236704c853aac7e1 102 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 25 88 1.2E-4 T 14-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 AMIS_46710 7db5c8c5379a32dc236704c853aac7e1 102 SUPERFAMILY SSF101386 6 94 8.78E-11 T 14-10-2018 AMIS_46710 7db5c8c5379a32dc236704c853aac7e1 102 Gene3D G3DSA:1.10.287.1080 5 96 1.1E-11 T 14-10-2018 AMIS_22140 1e47eb1d27c5dc0f163398b15c9c3bf2 390 ProSitePatterns PS00375 UDP-glycosyltransferases signature. 283 324 - T 14-10-2018 IPR035595 UDP-glycosyltransferase family, conserved site Reactome: R-HSA-156588 AMIS_22140 1e47eb1d27c5dc0f163398b15c9c3bf2 390 Gene3D G3DSA:3.40.50.2000 7 387 2.4E-135 T 14-10-2018 AMIS_22140 1e47eb1d27c5dc0f163398b15c9c3bf2 390 SUPERFAMILY SSF53756 3 389 3.14E-72 T 14-10-2018 AMIS_22140 1e47eb1d27c5dc0f163398b15c9c3bf2 390 TIGRFAM TIGR01426 MGT: glycosyltransferase, MGT family 8 388 3.0E-117 T 14-10-2018 IPR006326 UDP-glycosyltransferase, MGT GO:0016758|GO:0016999 AMIS_22140 1e47eb1d27c5dc0f163398b15c9c3bf2 390 Pfam PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 227 361 1.3E-15 T 14-10-2018 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0016758 Reactome: R-HSA-156588 AMIS_22140 1e47eb1d27c5dc0f163398b15c9c3bf2 390 Gene3D G3DSA:3.40.50.2000 213 375 2.4E-135 T 14-10-2018 AMIS_34250 bfc7d0b17998e9cff28ae16dc468cb89 310 Pfam PF02517 CAAX protease self-immunity 132 232 7.3E-12 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 AMIS_72560 112f883e6adce4ff95d0a3ecb17d71fb 388 Gene3D G3DSA:3.30.590.20 17 383 2.2E-114 T 14-10-2018 AMIS_72560 112f883e6adce4ff95d0a3ecb17d71fb 388 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 26 304 1.0E-51 T 14-10-2018 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AMIS_72560 112f883e6adce4ff95d0a3ecb17d71fb 388 Hamap MF_01609 Glutamate--cysteine ligase [gshA]. 1 388 72.502 T 14-10-2018 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AMIS_72560 112f883e6adce4ff95d0a3ecb17d71fb 388 TIGRFAM TIGR02050 gshA_cyan_rel: carboxylate-amine ligase, YbdK family 25 306 2.2E-77 T 14-10-2018 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AMIS_72560 112f883e6adce4ff95d0a3ecb17d71fb 388 SUPERFAMILY SSF55931 21 380 2.16E-85 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AMIS_55920 0dfdcdd207ee0dae47b3de174611e139 211 SUPERFAMILY SSF53271 1 208 4.33E-50 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like AMIS_55920 0dfdcdd207ee0dae47b3de174611e139 211 Pfam PF00156 Phosphoribosyl transferase domain 12 193 1.4E-24 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AMIS_55920 0dfdcdd207ee0dae47b3de174611e139 211 Gene3D G3DSA:3.30.1310.20 53 115 1.3E-70 T 14-10-2018 AMIS_55920 0dfdcdd207ee0dae47b3de174611e139 211 Gene3D G3DSA:3.40.50.2020 3 202 1.3E-70 T 14-10-2018 AMIS_73080 efaee7ef23528a9bef19c1aa7a8f4c04 266 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 85 98 - T 14-10-2018 IPR020583 Inositol monophosphatase, metal-binding site AMIS_73080 efaee7ef23528a9bef19c1aa7a8f4c04 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 40 60 1.4E-19 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMIS_73080 efaee7ef23528a9bef19c1aa7a8f4c04 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 62 78 1.4E-19 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMIS_73080 efaee7ef23528a9bef19c1aa7a8f4c04 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 214 238 1.4E-19 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMIS_73080 efaee7ef23528a9bef19c1aa7a8f4c04 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 85 101 1.4E-19 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMIS_73080 efaee7ef23528a9bef19c1aa7a8f4c04 266 Gene3D G3DSA:3.30.540.10 3 143 8.2E-38 T 14-10-2018 AMIS_73080 efaee7ef23528a9bef19c1aa7a8f4c04 266 TIGRFAM TIGR02067 his_9_HisN: histidinol-phosphatase 8 262 6.8E-84 T 14-10-2018 IPR011809 Histidinol-phosphate phosphatase, putative, inositol monophosphatase GO:0004401 KEGG: 00340+3.1.3.15 AMIS_73080 efaee7ef23528a9bef19c1aa7a8f4c04 266 Pfam PF00459 Inositol monophosphatase family 13 262 1.6E-46 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMIS_73080 efaee7ef23528a9bef19c1aa7a8f4c04 266 SUPERFAMILY SSF56655 4 262 5.1E-73 T 14-10-2018 AMIS_73080 efaee7ef23528a9bef19c1aa7a8f4c04 266 Gene3D G3DSA:3.40.190.80 150 263 3.5E-22 T 14-10-2018 AMIS_13260 c1fee49852a912b74b52417e27c2be4e 194 SUPERFAMILY SSF52507 10 149 1.57E-30 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 AMIS_13260 c1fee49852a912b74b52417e27c2be4e 194 Pfam PF02441 Flavoprotein 12 150 1.7E-16 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AMIS_13260 c1fee49852a912b74b52417e27c2be4e 194 Gene3D G3DSA:3.40.50.1950 7 165 2.7E-26 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 AMIS_9370 9a11935e35df071eb3f0939af900006a 192 Pfam PF00857 Isochorismatase family 4 181 1.9E-32 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 AMIS_9370 9a11935e35df071eb3f0939af900006a 192 SUPERFAMILY SSF52499 2 184 9.03E-49 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AMIS_9370 9a11935e35df071eb3f0939af900006a 192 Gene3D G3DSA:3.40.50.850 2 185 4.2E-62 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AMIS_44160 4240d2e49bcdebcdcee13d6251b43e9d 283 Gene3D G3DSA:3.40.50.150 10 283 7.6E-108 T 14-10-2018 AMIS_44160 4240d2e49bcdebcdcee13d6251b43e9d 283 SUPERFAMILY SSF53335 27 271 3.16E-44 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_44160 4240d2e49bcdebcdcee13d6251b43e9d 283 Pfam PF04672 S-adenosyl methyltransferase 20 283 5.6E-101 T 14-10-2018 IPR006764 S-adenosyl-L-methionine dependent methyltransferase, SAV2177 type AMIS_44160 4240d2e49bcdebcdcee13d6251b43e9d 283 PIRSF PIRSF017393 10 283 4.5E-99 T 14-10-2018 IPR006764 S-adenosyl-L-methionine dependent methyltransferase, SAV2177 type AMIS_73020 6ad35d8f57c8fa5d5cbccc438bf0351b 267 SUPERFAMILY SSF88946 77 167 1.23E-23 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_73020 6ad35d8f57c8fa5d5cbccc438bf0351b 267 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 106 137 - T 14-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_73020 6ad35d8f57c8fa5d5cbccc438bf0351b 267 Pfam PF08281 Sigma-70, region 4 193 243 7.5E-17 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_73020 6ad35d8f57c8fa5d5cbccc438bf0351b 267 Pfam PF04542 Sigma-70 region 2 89 151 4.7E-17 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_73020 6ad35d8f57c8fa5d5cbccc438bf0351b 267 SUPERFAMILY SSF88659 189 248 2.24E-17 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_73020 6ad35d8f57c8fa5d5cbccc438bf0351b 267 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 90 246 2.8E-27 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_73020 6ad35d8f57c8fa5d5cbccc438bf0351b 267 Gene3D G3DSA:1.10.10.10 184 252 7.0E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_73020 6ad35d8f57c8fa5d5cbccc438bf0351b 267 Gene3D G3DSA:1.10.1740.10 69 154 1.2E-35 T 14-10-2018 AMIS_73020 6ad35d8f57c8fa5d5cbccc438bf0351b 267 TIGRFAM TIGR02947 SigH_actino: RNA polymerase sigma-70 factor, TIGR02947 family 72 260 1.4E-106 T 14-10-2018 IPR014293 RNA polymerase sigma-70, actinobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_13710 82b7439f872e0cdad18795bed4e74969 402 Gene3D G3DSA:3.40.50.200 17 317 1.7E-57 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AMIS_13710 82b7439f872e0cdad18795bed4e74969 402 Pfam PF00082 Subtilase family 57 303 3.3E-29 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AMIS_13710 82b7439f872e0cdad18795bed4e74969 402 SUPERFAMILY SSF52743 40 314 2.09E-53 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AMIS_13710 82b7439f872e0cdad18795bed4e74969 402 PRINTS PR00723 Subtilisin serine protease family (S8) signature 256 272 2.2E-8 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMIS_13710 82b7439f872e0cdad18795bed4e74969 402 PRINTS PR00723 Subtilisin serine protease family (S8) signature 95 108 2.2E-8 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMIS_13710 82b7439f872e0cdad18795bed4e74969 402 PRINTS PR00723 Subtilisin serine protease family (S8) signature 57 76 2.2E-8 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related AMIS_67490 6073bbf2903e44e98ca792a32d17f589 642 Pfam PF01804 Penicillin amidase 2 446 2.0E-99 T 14-10-2018 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase GO:0016787|GO:0017000 AMIS_67490 6073bbf2903e44e98ca792a32d17f589 642 Pfam PF01804 Penicillin amidase 452 633 9.3E-25 T 14-10-2018 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase GO:0016787|GO:0017000 AMIS_67490 6073bbf2903e44e98ca792a32d17f589 642 Gene3D G3DSA:1.10.439.10 1 127 2.4E-26 T 14-10-2018 IPR023343 Penicillin amidase type, domain 1 GO:0016811 AMIS_67490 6073bbf2903e44e98ca792a32d17f589 642 Gene3D G3DSA:3.60.20.10 151 264 4.8E-22 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMIS_67490 6073bbf2903e44e98ca792a32d17f589 642 Gene3D G3DSA:3.60.20.10 527 638 3.4E-25 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMIS_67490 6073bbf2903e44e98ca792a32d17f589 642 Gene3D G3DSA:3.60.20.10 276 484 2.2E-25 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMIS_67490 6073bbf2903e44e98ca792a32d17f589 642 PIRSF PIRSF001227 446 516 4.9 T 14-10-2018 IPR014395 Penicillin/GL-7-ACA/AHL acylase GO:0016811 AMIS_67490 6073bbf2903e44e98ca792a32d17f589 642 PIRSF PIRSF001227 521 638 3.2E-26 T 14-10-2018 IPR014395 Penicillin/GL-7-ACA/AHL acylase GO:0016811 AMIS_67490 6073bbf2903e44e98ca792a32d17f589 642 PIRSF PIRSF001227 1 452 3.3E-102 T 14-10-2018 IPR014395 Penicillin/GL-7-ACA/AHL acylase GO:0016811 AMIS_67490 6073bbf2903e44e98ca792a32d17f589 642 SUPERFAMILY SSF56235 2 635 6.17E-108 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMIS_49630 a0fab2269a3782e0edd3a4dee109dd9b 256 Pfam PF00975 Thioesterase domain 26 249 5.1E-44 T 14-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 AMIS_49630 a0fab2269a3782e0edd3a4dee109dd9b 256 SMART SM00824 Thioesterase 28 246 0.0095 T 14-10-2018 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 AMIS_49630 a0fab2269a3782e0edd3a4dee109dd9b 256 Gene3D G3DSA:3.40.50.1820 24 249 2.8E-62 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_49630 a0fab2269a3782e0edd3a4dee109dd9b 256 SUPERFAMILY SSF53474 21 243 3.91E-46 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_56100 96d320548a5ad3aab47b971e61dfeb43 207 SUPERFAMILY SSF109854 3 162 1.1E-11 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes AMIS_56100 96d320548a5ad3aab47b971e61dfeb43 207 TIGRFAM TIGR03083 TIGR03083: uncharacterized Actinobacterial protein TIGR03083 8 181 9.3E-14 T 14-10-2018 IPR017517 Conserved hypothetical protein CHP03083, actinobacterial-type AMIS_56100 96d320548a5ad3aab47b971e61dfeb43 207 Gene3D G3DSA:1.20.120.450 2 160 2.4E-13 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes AMIS_56100 96d320548a5ad3aab47b971e61dfeb43 207 Pfam PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain 9 156 3.8E-15 T 14-10-2018 IPR024344 Mycothiol-dependent maleylpyruvate isomerase, metal-binding domain GO:0046872 AMIS_16820 d929706f18f125bbf5e3918b1ecd2427 434 Pfam PF00144 Beta-lactamase 12 320 4.9E-54 T 14-10-2018 IPR001466 Beta-lactamase-related AMIS_16820 d929706f18f125bbf5e3918b1ecd2427 434 SUPERFAMILY SSF56601 9 315 1.27E-71 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMIS_16820 d929706f18f125bbf5e3918b1ecd2427 434 Gene3D G3DSA:3.40.710.10 5 319 6.0E-74 T 14-10-2018 AMIS_59760 341bbe04c097090f7e820e5fa1975037 201 Gene3D G3DSA:1.10.10.60 7 55 4.8E-16 T 14-10-2018 AMIS_59760 341bbe04c097090f7e820e5fa1975037 201 Gene3D G3DSA:1.10.357.10 57 200 2.3E-30 T 14-10-2018 AMIS_59760 341bbe04c097090f7e820e5fa1975037 201 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 62 2.2E-14 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_59760 341bbe04c097090f7e820e5fa1975037 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 8.6E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_59760 341bbe04c097090f7e820e5fa1975037 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 8.6E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_59760 341bbe04c097090f7e820e5fa1975037 201 SUPERFAMILY SSF46689 10 76 9.21E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_8710 5bee8aa8288497b98ad23daa160794f3 282 Gene3D G3DSA:1.10.260.40 7 79 1.8E-5 T 14-10-2018 AMIS_8710 5bee8aa8288497b98ad23daa160794f3 282 Pfam PF13560 Helix-turn-helix domain 11 71 5.0E-12 T 14-10-2018 AMIS_8710 5bee8aa8288497b98ad23daa160794f3 282 SMART SM00530 15 68 8.4E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMIS_8710 5bee8aa8288497b98ad23daa160794f3 282 SUPERFAMILY SSF47413 9 72 2.0E-6 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_37270 4eae23bc3f7574bf35243e48ec7bb2f4 432 Gene3D G3DSA:3.40.190.10 159 413 7.1E-69 T 14-10-2018 AMIS_37270 4eae23bc3f7574bf35243e48ec7bb2f4 432 Pfam PF13416 Bacterial extracellular solute-binding protein 55 355 2.3E-30 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein AMIS_37270 4eae23bc3f7574bf35243e48ec7bb2f4 432 SUPERFAMILY SSF53850 19 427 1.73E-73 T 14-10-2018 AMIS_37270 4eae23bc3f7574bf35243e48ec7bb2f4 432 Gene3D G3DSA:3.40.190.10 64 387 7.1E-69 T 14-10-2018 AMIS_58720 bff2c7403529f92afdb190fb27120d5e 387 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 32 361 4.4E-77 T 14-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AMIS_58720 bff2c7403529f92afdb190fb27120d5e 387 Gene3D G3DSA:3.40.50.2000 1 188 1.8E-49 T 14-10-2018 AMIS_58720 bff2c7403529f92afdb190fb27120d5e 387 Gene3D G3DSA:3.40.50.2000 189 334 3.3E-39 T 14-10-2018 AMIS_58720 bff2c7403529f92afdb190fb27120d5e 387 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 6 361 1.4E-73 T 14-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 AMIS_58720 bff2c7403529f92afdb190fb27120d5e 387 SUPERFAMILY SSF53756 4 365 3.14E-78 T 14-10-2018 AMIS_59220 eb4e0f84ebe2ef65447c669f0254daf0 264 SUPERFAMILY SSF56317 3 241 6.15E-45 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AMIS_59220 eb4e0f84ebe2ef65447c669f0254daf0 264 Gene3D G3DSA:3.60.110.10 3 256 5.7E-42 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AMIS_59220 eb4e0f84ebe2ef65447c669f0254daf0 264 Pfam PF00795 Carbon-nitrogen hydrolase 8 240 7.3E-26 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 AMIS_51150 c1976a794df1d1d2c8d5c38666f223bc 243 SUPERFAMILY SSF55729 63 241 2.57E-24 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_51150 c1976a794df1d1d2c8d5c38666f223bc 243 Gene3D G3DSA:3.40.630.30 58 243 4.2E-26 T 14-10-2018 AMIS_51150 c1976a794df1d1d2c8d5c38666f223bc 243 Pfam PF00583 Acetyltransferase (GNAT) family 114 217 3.0E-7 T 14-10-2018 IPR000182 GNAT domain AMIS_3640 69b9b70daecd47ebd033140a051c59d6 438 SUPERFAMILY SSF53686 15 393 2.23E-127 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMIS_3640 69b9b70daecd47ebd033140a051c59d6 438 Gene3D G3DSA:3.40.50.1100 66 389 2.0E-161 T 14-10-2018 AMIS_3640 69b9b70daecd47ebd033140a051c59d6 438 Gene3D G3DSA:3.40.50.1100 22 217 2.0E-161 T 14-10-2018 AMIS_3640 69b9b70daecd47ebd033140a051c59d6 438 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 65 383 2.2E-51 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AMIS_3640 69b9b70daecd47ebd033140a051c59d6 438 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 19 394 2.3E-160 T 14-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AMIS_3640 69b9b70daecd47ebd033140a051c59d6 438 PIRSF PIRSF001413 8 400 1.7E-136 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AMIS_3640 69b9b70daecd47ebd033140a051c59d6 438 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 92 106 - T 14-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AMIS_3640 69b9b70daecd47ebd033140a051c59d6 438 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 11 396 46.433 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AMIS_69180 decc0f1f92f0092d8e1c2a574e2aa3d6 308 TIGRFAM TIGR03560 F420_Rv1855c: probable F420-dependent oxidoreductase, Rv1855c family 3 222 2.3E-86 T 14-10-2018 IPR019952 F420-dependent oxidoreductase-predicted, Rv1855c AMIS_69180 decc0f1f92f0092d8e1c2a574e2aa3d6 308 Pfam PF00296 Luciferase-like monooxygenase 6 249 8.0E-51 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMIS_69180 decc0f1f92f0092d8e1c2a574e2aa3d6 308 SUPERFAMILY SSF51679 2 308 1.83E-71 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_69180 decc0f1f92f0092d8e1c2a574e2aa3d6 308 Gene3D G3DSA:3.20.20.30 1 308 2.3E-70 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_60180 b291b64b988b34e4ecf783e0fe4299b8 924 Pfam PF13086 AAA domain 252 485 4.3E-30 T 14-10-2018 AMIS_60180 b291b64b988b34e4ecf783e0fe4299b8 924 Gene3D G3DSA:3.40.50.300 194 509 5.6E-48 T 14-10-2018 AMIS_60180 b291b64b988b34e4ecf783e0fe4299b8 924 Pfam PF13087 AAA domain 506 700 4.9E-23 T 14-10-2018 AMIS_60180 b291b64b988b34e4ecf783e0fe4299b8 924 Gene3D G3DSA:3.40.50.300 526 734 1.5E-31 T 14-10-2018 AMIS_60180 b291b64b988b34e4ecf783e0fe4299b8 924 SUPERFAMILY SSF52540 249 718 6.66E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_60180 b291b64b988b34e4ecf783e0fe4299b8 924 SMART SM00382 262 501 0.0096 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_63580 ee75f5bf8bed36eaaa5672bc9d3cb55e 221 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 182 1.3E-24 T 14-10-2018 AMIS_63580 ee75f5bf8bed36eaaa5672bc9d3cb55e 221 Gene3D G3DSA:1.10.150.240 17 82 1.1E-45 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AMIS_63580 ee75f5bf8bed36eaaa5672bc9d3cb55e 221 Gene3D G3DSA:3.40.50.1000 6 200 1.1E-45 T 14-10-2018 IPR023214 HAD superfamily AMIS_63580 ee75f5bf8bed36eaaa5672bc9d3cb55e 221 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 98 177 1.3E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMIS_63580 ee75f5bf8bed36eaaa5672bc9d3cb55e 221 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 65 182 7.3E-12 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMIS_63580 ee75f5bf8bed36eaaa5672bc9d3cb55e 221 SUPERFAMILY SSF56784 4 212 2.03E-44 T 14-10-2018 IPR036412 HAD-like superfamily AMIS_46400 49903ad5bf6895b4b164657f1f7890c5 390 SUPERFAMILY SSF55874 288 378 1.66E-6 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_46400 49903ad5bf6895b4b164657f1f7890c5 390 Gene3D G3DSA:3.30.565.10 258 379 1.5E-21 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_46400 49903ad5bf6895b4b164657f1f7890c5 390 Pfam PF07730 Histidine kinase 194 260 4.9E-14 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMIS_44840 f5132382dad1f228a5194c73ee1fed92 155 Gene3D G3DSA:3.50.30.40 1 155 2.7E-57 T 14-10-2018 AMIS_44840 f5132382dad1f228a5194c73ee1fed92 155 SUPERFAMILY SSF89562 3 154 4.32E-45 T 14-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily AMIS_44840 f5132382dad1f228a5194c73ee1fed92 155 TIGRFAM TIGR01935 NOT-MenG: RraA family 4 152 8.1E-58 T 14-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 AMIS_44840 f5132382dad1f228a5194c73ee1fed92 155 Pfam PF03737 Aldolase/RraA 4 152 2.3E-40 T 14-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AMIS_24210 da3d481547e374fe50aa587953641910 138 Gene3D G3DSA:2.30.110.10 20 125 1.8E-6 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AMIS_57070 65f9597bdeab20de73811d9471512934 126 Pfam PF01575 MaoC like domain 16 95 3.4E-12 T 14-10-2018 IPR002539 MaoC-like dehydratase domain AMIS_57070 65f9597bdeab20de73811d9471512934 126 Gene3D G3DSA:3.10.129.10 7 124 5.2E-25 T 14-10-2018 AMIS_57070 65f9597bdeab20de73811d9471512934 126 SUPERFAMILY SSF54637 5 122 4.04E-21 T 14-10-2018 IPR029069 HotDog domain superfamily AMIS_43690 9f52666a4c693520a62e1b7ca3247d77 227 TIGRFAM TIGR03083 TIGR03083: uncharacterized Actinobacterial protein TIGR03083 11 180 1.1E-15 T 14-10-2018 IPR017517 Conserved hypothetical protein CHP03083, actinobacterial-type AMIS_43690 9f52666a4c693520a62e1b7ca3247d77 227 Gene3D G3DSA:1.20.120.450 1 162 2.4E-27 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes AMIS_43690 9f52666a4c693520a62e1b7ca3247d77 227 SUPERFAMILY SSF109854 4 163 5.49E-20 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes AMIS_43690 9f52666a4c693520a62e1b7ca3247d77 227 Pfam PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain 12 158 1.7E-19 T 14-10-2018 IPR024344 Mycothiol-dependent maleylpyruvate isomerase, metal-binding domain GO:0046872 AMIS_7430 0e6780f38653eba402325cd53cab175d 317 SMART SM00382 40 222 5.4E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_7430 0e6780f38653eba402325cd53cab175d 317 Gene3D G3DSA:3.40.50.300 8 241 1.4E-51 T 14-10-2018 AMIS_7430 0e6780f38653eba402325cd53cab175d 317 SUPERFAMILY SSF52540 11 234 1.7E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_7430 0e6780f38653eba402325cd53cab175d 317 Pfam PF00005 ABC transporter 34 172 1.2E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_31070 cbe8883f4c09b7b54a891e424e301866 519 SUPERFAMILY SSF53901 300 413 2.09E-15 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_31070 cbe8883f4c09b7b54a891e424e301866 519 Gene3D G3DSA:2.40.50.840 441 517 1.9E-21 T 14-10-2018 AMIS_6990 3316db3c1d7ae3f65c3395bf83e7d126 277 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 107 129 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AMIS_6990 3316db3c1d7ae3f65c3395bf83e7d126 277 Gene3D G3DSA:1.20.120.1760 55 237 7.6E-11 T 14-10-2018 AMIS_6990 3316db3c1d7ae3f65c3395bf83e7d126 277 Pfam PF01066 CDP-alcohol phosphatidyltransferase 67 129 7.2E-11 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AMIS_54920 eacfe2f2078375629e100e24f0b88b88 375 SUPERFAMILY SSF53850 38 265 8.7E-25 T 14-10-2018 AMIS_54920 eacfe2f2078375629e100e24f0b88b88 375 Pfam PF09084 NMT1/THI5 like 47 266 1.8E-31 T 14-10-2018 IPR015168 SsuA/THI5-like AMIS_54920 eacfe2f2078375629e100e24f0b88b88 375 Gene3D G3DSA:3.40.190.10 118 228 8.0E-54 T 14-10-2018 AMIS_54920 eacfe2f2078375629e100e24f0b88b88 375 Gene3D G3DSA:3.40.190.10 39 317 8.0E-54 T 14-10-2018 AMIS_74040 408d2dba261eabbfefc67b2b70f13bff 158 Pfam PF12802 MarR family 48 107 1.0E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_74040 408d2dba261eabbfefc67b2b70f13bff 158 SUPERFAMILY SSF46785 6 155 3.33E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_74040 408d2dba261eabbfefc67b2b70f13bff 158 Gene3D G3DSA:1.10.10.10 15 158 8.6E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_74040 408d2dba261eabbfefc67b2b70f13bff 158 SMART SM00347 41 144 6.6E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_52850 cea1b10a55f448265ebcfbedc3d839cb 654 Gene3D G3DSA:3.30.565.10 514 654 6.5E-24 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_52850 cea1b10a55f448265ebcfbedc3d839cb 654 Pfam PF07730 Histidine kinase 444 511 4.3E-9 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMIS_52850 cea1b10a55f448265ebcfbedc3d839cb 654 SUPERFAMILY SSF55874 547 653 9.82E-16 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_52850 cea1b10a55f448265ebcfbedc3d839cb 654 SMART SM00387 551 654 1.1E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_9030 c418e40350362e0ba52b6ebcb057a18c 158 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 15 35 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMIS_9030 c418e40350362e0ba52b6ebcb057a18c 158 Pfam PF07963 Prokaryotic N-terminal methylation motif 12 36 5.0E-9 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMIS_9030 c418e40350362e0ba52b6ebcb057a18c 158 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 16 37 2.0E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMIS_9030 c418e40350362e0ba52b6ebcb057a18c 158 PRINTS PR00813 Bacterial general secretion pathway protein G signature 52 70 3.0E-12 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AMIS_9030 c418e40350362e0ba52b6ebcb057a18c 158 PRINTS PR00813 Bacterial general secretion pathway protein G signature 16 41 3.0E-12 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AMIS_9030 c418e40350362e0ba52b6ebcb057a18c 158 Gene3D G3DSA:3.30.700.10 17 158 3.0E-25 T 14-10-2018 AMIS_9030 c418e40350362e0ba52b6ebcb057a18c 158 SUPERFAMILY SSF54523 17 144 1.02E-21 T 14-10-2018 AMIS_45210 47ba9d4156fde7479592e5b550cdb8a0 195 Pfam PF12079 Protein of unknown function (DUF3558) 22 126 1.7E-8 T 14-10-2018 IPR024520 Protein of unknown function DUF3558 AMIS_57980 70b4e89ef5f0f4f1f628e7a97200c831 252 Pfam PF09339 IclR helix-turn-helix domain 7 57 1.4E-16 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AMIS_57980 70b4e89ef5f0f4f1f628e7a97200c831 252 Gene3D G3DSA:1.10.10.10 3 75 1.9E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_57980 70b4e89ef5f0f4f1f628e7a97200c831 252 Gene3D G3DSA:3.30.450.40 76 252 1.0E-38 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_57980 70b4e89ef5f0f4f1f628e7a97200c831 252 SUPERFAMILY SSF55781 71 249 2.16E-36 T 14-10-2018 AMIS_57980 70b4e89ef5f0f4f1f628e7a97200c831 252 Pfam PF01614 Bacterial transcriptional regulator 125 246 2.0E-29 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal AMIS_57980 70b4e89ef5f0f4f1f628e7a97200c831 252 SUPERFAMILY SSF46785 5 77 3.35E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_57980 70b4e89ef5f0f4f1f628e7a97200c831 252 SMART SM00346 5 95 5.9E-24 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AMIS_34770 511bc30fa4d2981b86bddb7affa027c5 122 Gene3D G3DSA:3.10.180.10 6 122 1.9E-17 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_34770 511bc30fa4d2981b86bddb7affa027c5 122 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 116 7.5E-7 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMIS_34770 511bc30fa4d2981b86bddb7affa027c5 122 SUPERFAMILY SSF54593 1 119 8.53E-21 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_38650 c5fe9714c1864ce2aa143b572a7e3274 233 Gene3D G3DSA:3.40.50.720 1 229 5.5E-43 T 14-10-2018 AMIS_38650 c5fe9714c1864ce2aa143b572a7e3274 233 Pfam PF00106 short chain dehydrogenase 9 183 5.2E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_38650 c5fe9714c1864ce2aa143b572a7e3274 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 7.4E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_38650 c5fe9714c1864ce2aa143b572a7e3274 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 7.4E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_38650 c5fe9714c1864ce2aa143b572a7e3274 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 7.4E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_38650 c5fe9714c1864ce2aa143b572a7e3274 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 7.4E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_38650 c5fe9714c1864ce2aa143b572a7e3274 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 193 213 7.4E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_38650 c5fe9714c1864ce2aa143b572a7e3274 233 SUPERFAMILY SSF51735 2 228 1.06E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_44480 89df6068dc9fc716688ad7a0d3b7c4a9 192 SUPERFAMILY SSF53597 3 190 7.46E-25 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AMIS_44480 89df6068dc9fc716688ad7a0d3b7c4a9 192 Pfam PF01872 RibD C-terminal domain 4 184 1.9E-27 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 AMIS_44480 89df6068dc9fc716688ad7a0d3b7c4a9 192 Gene3D G3DSA:3.40.430.10 1 189 8.5E-36 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AMIS_65730 d22eee86a8a3b1e21a3afe692a4dc67a 693 Gene3D G3DSA:2.60.120.260 593 691 1.7E-5 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_65730 d22eee86a8a3b1e21a3afe692a4dc67a 693 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 229 379 6.0E-14 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AMIS_65730 d22eee86a8a3b1e21a3afe692a4dc67a 693 Gene3D G3DSA:3.40.80.10 202 395 1.6E-51 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AMIS_65730 d22eee86a8a3b1e21a3afe692a4dc67a 693 SMART SM00701 204 352 1.4E-38 T 14-10-2018 IPR006619 Peptidoglycan recognition protein family domain, metazoa/bacteria GO:0008270|GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AMIS_65730 d22eee86a8a3b1e21a3afe692a4dc67a 693 SUPERFAMILY SSF55846 203 393 3.2E-44 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AMIS_29350 93774de6c4f9c553f41841cc0a595c2d 549 SUPERFAMILY SSF53474 67 277 4.41E-15 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_29350 93774de6c4f9c553f41841cc0a595c2d 549 Pfam PF00561 alpha/beta hydrolase fold 109 264 6.1E-19 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_25760 b2de2549eaca2e736b1af40c18c420a8 898 SUPERFAMILY SSF52540 6 212 1.36E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_25760 b2de2549eaca2e736b1af40c18c420a8 898 Pfam PF00196 Bacterial regulatory proteins, luxR family 834 884 2.2E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_25760 b2de2549eaca2e736b1af40c18c420a8 898 Gene3D G3DSA:1.25.40.10 533 728 3.3E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_25760 b2de2549eaca2e736b1af40c18c420a8 898 SMART SM00421 831 888 8.0E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_25760 b2de2549eaca2e736b1af40c18c420a8 898 SUPERFAMILY SSF46894 821 888 7.14E-15 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_25760 b2de2549eaca2e736b1af40c18c420a8 898 Gene3D G3DSA:1.10.10.10 780 893 2.3E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_25760 b2de2549eaca2e736b1af40c18c420a8 898 Pfam PF13191 AAA ATPase domain 4 138 9.9E-14 T 14-10-2018 AMIS_25760 b2de2549eaca2e736b1af40c18c420a8 898 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 848 864 1.5E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_25760 b2de2549eaca2e736b1af40c18c420a8 898 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 864 876 1.5E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_25760 b2de2549eaca2e736b1af40c18c420a8 898 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 834 848 1.5E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_15410 6b90e8065bfd49097a90348a1a71fc3e 436 PRINTS PR00083 Histidinol dehydrogenase signature 32 56 1.0E-71 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AMIS_15410 6b90e8065bfd49097a90348a1a71fc3e 436 PRINTS PR00083 Histidinol dehydrogenase signature 206 231 1.0E-71 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AMIS_15410 6b90e8065bfd49097a90348a1a71fc3e 436 PRINTS PR00083 Histidinol dehydrogenase signature 327 352 1.0E-71 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AMIS_15410 6b90e8065bfd49097a90348a1a71fc3e 436 PRINTS PR00083 Histidinol dehydrogenase signature 257 276 1.0E-71 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AMIS_15410 6b90e8065bfd49097a90348a1a71fc3e 436 PRINTS PR00083 Histidinol dehydrogenase signature 235 256 1.0E-71 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AMIS_15410 6b90e8065bfd49097a90348a1a71fc3e 436 PRINTS PR00083 Histidinol dehydrogenase signature 133 159 1.0E-71 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AMIS_15410 6b90e8065bfd49097a90348a1a71fc3e 436 PRINTS PR00083 Histidinol dehydrogenase signature 368 386 1.0E-71 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AMIS_15410 6b90e8065bfd49097a90348a1a71fc3e 436 PIRSF PIRSF000099 8 436 2.5E-151 T 14-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AMIS_15410 6b90e8065bfd49097a90348a1a71fc3e 436 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 433 9.7E-141 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AMIS_15410 6b90e8065bfd49097a90348a1a71fc3e 436 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 235 267 - T 14-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 AMIS_15410 6b90e8065bfd49097a90348a1a71fc3e 436 Pfam PF00815 Histidinol dehydrogenase 19 434 3.5E-155 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AMIS_15410 6b90e8065bfd49097a90348a1a71fc3e 436 Gene3D G3DSA:3.40.50.1980 239 356 1.7E-110 T 14-10-2018 AMIS_15410 6b90e8065bfd49097a90348a1a71fc3e 436 SUPERFAMILY SSF53720 24 433 1.8E-68 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMIS_15410 6b90e8065bfd49097a90348a1a71fc3e 436 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 5 434 38.459 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AMIS_15410 6b90e8065bfd49097a90348a1a71fc3e 436 Gene3D G3DSA:3.40.50.1980 30 237 1.7E-110 T 14-10-2018 AMIS_76920 d5588c46556b441e6459dcfa6526f730 293 Gene3D G3DSA:3.40.630.30 3 292 4.6E-91 T 14-10-2018 AMIS_76920 d5588c46556b441e6459dcfa6526f730 293 TIGRFAM TIGR03448 mycothiol_MshD: mycothiol synthase 11 290 3.2E-94 T 14-10-2018 IPR017813 Mycothiol acetyltransferase GO:0016747 AMIS_76920 d5588c46556b441e6459dcfa6526f730 293 Hamap MF_01698 Mycothiol acetyltransferase [mshD]. 7 292 35.163 T 14-10-2018 IPR017813 Mycothiol acetyltransferase GO:0016747 AMIS_76920 d5588c46556b441e6459dcfa6526f730 293 PIRSF PIRSF021524 1 293 1.4E-106 T 14-10-2018 IPR017813 Mycothiol acetyltransferase GO:0016747 AMIS_76920 d5588c46556b441e6459dcfa6526f730 293 Pfam PF00583 Acetyltransferase (GNAT) family 185 281 2.0E-11 T 14-10-2018 IPR000182 GNAT domain AMIS_76920 d5588c46556b441e6459dcfa6526f730 293 SUPERFAMILY SSF55729 12 289 8.12E-39 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_78310 0e592a0024f5de6dfb04ad845e14262e 150 Gene3D G3DSA:1.10.1510.10 2 93 2.8E-25 T 14-10-2018 AMIS_78310 0e592a0024f5de6dfb04ad845e14262e 150 Pfam PF09424 Yqey-like protein 5 149 2.5E-44 T 14-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 AMIS_78310 0e592a0024f5de6dfb04ad845e14262e 150 Gene3D G3DSA:1.10.10.410 94 150 4.2E-14 T 14-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal AMIS_78310 0e592a0024f5de6dfb04ad845e14262e 150 SUPERFAMILY SSF89095 3 149 3.3E-32 T 14-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 AMIS_13240 303e2ca20aaa274cf41d518ce5b40e25 226 SMART SM00943 27 193 3.5E-15 T 14-10-2018 IPR015330 DNA primase/polymerase, bifunctional, N-terminal AMIS_13240 303e2ca20aaa274cf41d518ce5b40e25 226 Pfam PF09250 Bifunctional DNA primase/polymerase, N-terminal 27 187 2.0E-13 T 14-10-2018 IPR015330 DNA primase/polymerase, bifunctional, N-terminal AMIS_75650 8b8179c2cec2924be1976aeca594c81c 262 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 102 122 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 AMIS_75650 8b8179c2cec2924be1976aeca594c81c 262 Gene3D G3DSA:1.10.12.10 205 261 1.5E-18 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal AMIS_75650 8b8179c2cec2924be1976aeca594c81c 262 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 261 1.4E-53 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AMIS_75650 8b8179c2cec2924be1976aeca594c81c 262 SUPERFAMILY SSF52096 1 262 5.97E-74 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMIS_75650 8b8179c2cec2924be1976aeca594c81c 262 Gene3D G3DSA:3.90.226.10 1 203 5.8E-60 T 14-10-2018 AMIS_30980 e0b46b49d1c6c3243d2222bb7c077da2 333 Gene3D G3DSA:3.40.190.10 52 307 3.2E-55 T 14-10-2018 AMIS_30980 e0b46b49d1c6c3243d2222bb7c077da2 333 Pfam PF09084 NMT1/THI5 like 54 264 1.8E-40 T 14-10-2018 IPR015168 SsuA/THI5-like AMIS_30980 e0b46b49d1c6c3243d2222bb7c077da2 333 Gene3D G3DSA:3.40.190.10 122 224 3.2E-55 T 14-10-2018 AMIS_30980 e0b46b49d1c6c3243d2222bb7c077da2 333 SUPERFAMILY SSF53850 48 275 6.86E-36 T 14-10-2018 AMIS_43580 79025bfd2b1525b36ef62cbafa62a554 358 SUPERFAMILY SSF51395 1 357 3.38E-110 T 14-10-2018 AMIS_43580 79025bfd2b1525b36ef62cbafa62a554 358 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 3 331 1.4E-72 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AMIS_43580 79025bfd2b1525b36ef62cbafa62a554 358 Gene3D G3DSA:3.20.20.70 1 358 4.3E-119 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_23750 3249d61ad0d6e8d55a02f88fa986046d 627 Gene3D G3DSA:1.10.10.2840 493 624 3.6E-26 T 14-10-2018 AMIS_23750 3249d61ad0d6e8d55a02f88fa986046d 627 SMART SM00065 76 227 1.8E-21 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_23750 3249d61ad0d6e8d55a02f88fa986046d 627 Pfam PF13185 GAF domain 75 218 2.5E-18 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_23750 3249d61ad0d6e8d55a02f88fa986046d 627 Pfam PF13556 PucR C-terminal helix-turn-helix domain 561 619 5.2E-20 T 14-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain AMIS_23750 3249d61ad0d6e8d55a02f88fa986046d 627 Gene3D G3DSA:3.30.450.40 56 228 4.1E-41 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_23750 3249d61ad0d6e8d55a02f88fa986046d 627 SUPERFAMILY SSF55781 58 246 2.62E-31 T 14-10-2018 AMIS_32200 b578e59f0383677906ae8010cd3a0663 502 Pfam PF00534 Glycosyl transferases group 1 289 462 2.1E-21 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 AMIS_32200 b578e59f0383677906ae8010cd3a0663 502 Gene3D G3DSA:3.40.50.2000 12 203 5.1E-45 T 14-10-2018 AMIS_32200 b578e59f0383677906ae8010cd3a0663 502 SUPERFAMILY SSF53756 22 486 3.18E-42 T 14-10-2018 AMIS_32200 b578e59f0383677906ae8010cd3a0663 502 Gene3D G3DSA:3.40.50.2000 274 468 3.5E-37 T 14-10-2018 AMIS_41050 fcaa5f4550be2b2f29fec6f304e82f2f 272 Pfam PF14062 Domain of unknown function (DUF4253) 171 269 5.9E-8 T 14-10-2018 IPR025349 Domain of unknown function DUF4253 AMIS_50610 f376bdd544ef784c5733d014b6916bc1 197 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 6 177 3.9E-47 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 AMIS_50610 f376bdd544ef784c5733d014b6916bc1 197 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 182 8.0E-44 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 AMIS_50610 f376bdd544ef784c5733d014b6916bc1 197 Gene3D G3DSA:2.60.120.10 1 197 6.0E-60 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMIS_50610 f376bdd544ef784c5733d014b6916bc1 197 SUPERFAMILY SSF51182 1 192 1.53E-58 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily AMIS_5540 3a879aa94ee313ae553c76eda571267e 427 Pfam PF13347 MFS/sugar transport protein 3 417 6.1E-87 T 14-10-2018 AMIS_5540 3a879aa94ee313ae553c76eda571267e 427 SUPERFAMILY SSF103473 3 419 2.75E-33 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_5540 3a879aa94ee313ae553c76eda571267e 427 Gene3D G3DSA:1.20.1250.20 212 419 1.3E-11 T 14-10-2018 AMIS_5540 3a879aa94ee313ae553c76eda571267e 427 Gene3D G3DSA:1.20.1250.20 1 198 7.2E-13 T 14-10-2018 AMIS_50340 b3956a3bfd68f62513458d54af24184c 133 Gene3D G3DSA:2.30.110.10 4 125 1.1E-20 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AMIS_50340 b3956a3bfd68f62513458d54af24184c 133 Pfam PF04075 F420H(2)-dependent quinone reductase 16 116 3.7E-13 T 14-10-2018 IPR004378 F420H(2)-dependent quinone reductase GO:0016491|GO:0055114 AMIS_18590 1d89887c2a7fa2a2b7e8a829afb2f73e 361 Pfam PF13847 Methyltransferase domain 178 288 9.6E-20 T 14-10-2018 IPR025714 Methyltransferase domain AMIS_18590 1d89887c2a7fa2a2b7e8a829afb2f73e 361 Gene3D G3DSA:3.40.50.150 145 351 1.3E-31 T 14-10-2018 AMIS_18590 1d89887c2a7fa2a2b7e8a829afb2f73e 361 SUPERFAMILY SSF46785 26 90 1.27E-8 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_18590 1d89887c2a7fa2a2b7e8a829afb2f73e 361 Gene3D G3DSA:1.10.10.10 21 95 6.1E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_18590 1d89887c2a7fa2a2b7e8a829afb2f73e 361 SUPERFAMILY SSF53335 166 299 1.01E-30 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_22260 fbfc74eca8830dc0104f4f760eaf8b86 485 ProSitePatterns PS00216 Sugar transport proteins signature 1. 71 88 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AMIS_22260 fbfc74eca8830dc0104f4f760eaf8b86 485 SUPERFAMILY SSF103473 8 483 1.12E-64 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_22260 fbfc74eca8830dc0104f4f760eaf8b86 485 Pfam PF07690 Major Facilitator Superfamily 23 407 1.5E-51 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_22260 fbfc74eca8830dc0104f4f760eaf8b86 485 Gene3D G3DSA:1.20.1250.20 265 483 2.7E-21 T 14-10-2018 AMIS_22260 fbfc74eca8830dc0104f4f760eaf8b86 485 Gene3D G3DSA:1.20.1720.10 18 247 6.5E-44 T 14-10-2018 AMIS_53390 28c847c6f1de5fd3a611d9128f198c98 234 Pfam PF00440 Bacterial regulatory proteins, tetR family 40 81 7.7E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_53390 28c847c6f1de5fd3a611d9128f198c98 234 Gene3D G3DSA:1.10.357.10 79 217 4.6E-5 T 14-10-2018 AMIS_53390 28c847c6f1de5fd3a611d9128f198c98 234 SUPERFAMILY SSF46689 28 105 2.0E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_53390 28c847c6f1de5fd3a611d9128f198c98 234 Gene3D G3DSA:1.10.10.60 19 78 3.9E-11 T 14-10-2018 AMIS_66620 4dd018aa68e46560b18e0db38cda339a 486 Pfam PF07963 Prokaryotic N-terminal methylation motif 8 29 2.5E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMIS_66620 4dd018aa68e46560b18e0db38cda339a 486 Gene3D G3DSA:2.60.40.10 301 396 1.3E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_66620 4dd018aa68e46560b18e0db38cda339a 486 SUPERFAMILY SSF49313 431 476 1.88E-7 T 14-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 AMIS_66620 4dd018aa68e46560b18e0db38cda339a 486 SUPERFAMILY SSF49313 233 293 8.32E-7 T 14-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 AMIS_66620 4dd018aa68e46560b18e0db38cda339a 486 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 27 5.1E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMIS_66620 4dd018aa68e46560b18e0db38cda339a 486 Gene3D G3DSA:2.60.40.10 209 300 8.8E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_66620 4dd018aa68e46560b18e0db38cda339a 486 Gene3D G3DSA:2.60.40.10 397 481 1.3E-15 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_66620 4dd018aa68e46560b18e0db38cda339a 486 Pfam PF05345 Putative Ig domain 249 287 3.5E-7 T 14-10-2018 IPR008009 Putative Ig AMIS_66620 4dd018aa68e46560b18e0db38cda339a 486 Pfam PF05345 Putative Ig domain 432 471 2.8E-7 T 14-10-2018 IPR008009 Putative Ig AMIS_66620 4dd018aa68e46560b18e0db38cda339a 486 Pfam PF05345 Putative Ig domain 334 386 1.4E-5 T 14-10-2018 IPR008009 Putative Ig AMIS_8470 87874154314f3abc34d11be76b24c150 171 SUPERFAMILY SSF54637 8 156 8.36E-41 T 14-10-2018 IPR029069 HotDog domain superfamily AMIS_8470 87874154314f3abc34d11be76b24c150 171 Pfam PF03061 Thioesterase superfamily 26 97 1.2E-17 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AMIS_8470 87874154314f3abc34d11be76b24c150 171 Gene3D G3DSA:3.10.129.10 1 164 6.1E-50 T 14-10-2018 AMIS_21290 aafa7f905a7ac4301ecfd56bb1bdeee6 143 SUPERFAMILY SSF47413 80 136 5.63E-13 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_21290 aafa7f905a7ac4301ecfd56bb1bdeee6 143 Pfam PF13560 Helix-turn-helix domain 81 136 4.2E-9 T 14-10-2018 AMIS_21290 aafa7f905a7ac4301ecfd56bb1bdeee6 143 SMART SM00530 10 64 0.1 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMIS_21290 aafa7f905a7ac4301ecfd56bb1bdeee6 143 SMART SM00530 80 135 3.3E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMIS_21290 aafa7f905a7ac4301ecfd56bb1bdeee6 143 SUPERFAMILY SSF47413 8 56 1.02E-6 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_21290 aafa7f905a7ac4301ecfd56bb1bdeee6 143 Gene3D G3DSA:1.10.260.40 80 136 9.3E-12 T 14-10-2018 AMIS_37770 278df3e7fdad889139308a3071cc1e0c 298 SUPERFAMILY SSF161098 32 295 3.18E-59 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_37770 278df3e7fdad889139308a3071cc1e0c 298 Gene3D G3DSA:1.10.3720.10 31 286 1.0E-53 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_37770 278df3e7fdad889139308a3071cc1e0c 298 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 106 283 2.4E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_53800 48224dbf8eefb3e1f98b60fd97b1052c 307 Pfam PF13560 Helix-turn-helix domain 19 73 1.9E-12 T 14-10-2018 AMIS_53800 48224dbf8eefb3e1f98b60fd97b1052c 307 SMART SM00530 19 74 4.2E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMIS_53800 48224dbf8eefb3e1f98b60fd97b1052c 307 SUPERFAMILY SSF47413 15 69 8.73E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_53800 48224dbf8eefb3e1f98b60fd97b1052c 307 Gene3D G3DSA:1.10.260.40 7 72 1.4E-7 T 14-10-2018 AMIS_24500 f571a4ae47caeff9c0d2a7572dfe6a4b 256 Pfam PF02361 Cobalt transport protein 9 222 3.5E-19 T 14-10-2018 IPR003339 ABC/ECF transporter, transmembrane component AMIS_63080 9ce0d45cda98da8c25cfab0d2df578f7 112 Pfam PF12277 Protein of unknown function (DUF3618) 14 55 3.4E-13 T 14-10-2018 IPR022062 Protein of unknown function DUF3618 AMIS_55910 964fc5d489535c59a9b1f6db9013f464 236 ProSitePatterns PS00211 ABC transporters family signature. 127 141 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_55910 964fc5d489535c59a9b1f6db9013f464 236 SUPERFAMILY SSF52540 1 215 2.56E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_55910 964fc5d489535c59a9b1f6db9013f464 236 Gene3D G3DSA:3.40.50.300 1 235 2.4E-62 T 14-10-2018 AMIS_55910 964fc5d489535c59a9b1f6db9013f464 236 Pfam PF00005 ABC transporter 18 154 4.5E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_55910 964fc5d489535c59a9b1f6db9013f464 236 SMART SM00382 26 201 3.6E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_67640 00b4176dc2b379bbb682b6c312980cb1 188 SUPERFAMILY SSF54909 4 107 1.07E-16 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel AMIS_67640 00b4176dc2b379bbb682b6c312980cb1 188 Pfam PF03992 Antibiotic biosynthesis monooxygenase 9 77 1.5E-6 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain AMIS_68020 1777c74f7c452e2c4bb1b95ed7d2ca1d 255 Pfam PF00480 ROK family 10 157 6.8E-8 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AMIS_68020 1777c74f7c452e2c4bb1b95ed7d2ca1d 255 Gene3D G3DSA:3.30.420.40 2 123 5.1E-19 T 14-10-2018 AMIS_68020 1777c74f7c452e2c4bb1b95ed7d2ca1d 255 SUPERFAMILY SSF53067 9 222 3.81E-16 T 14-10-2018 AMIS_68020 1777c74f7c452e2c4bb1b95ed7d2ca1d 255 Gene3D G3DSA:3.30.420.40 124 254 4.7E-32 T 14-10-2018 AMIS_63680 91419cf0c9197f7142391f6d75dafbef 527 Gene3D G3DSA:3.30.870.10 18 233 2.0E-15 T 14-10-2018 AMIS_63680 91419cf0c9197f7142391f6d75dafbef 527 Gene3D G3DSA:3.30.870.10 272 417 1.8E-13 T 14-10-2018 AMIS_63680 91419cf0c9197f7142391f6d75dafbef 527 SMART SM00155 370 397 0.0024 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AMIS_63680 91419cf0c9197f7142391f6d75dafbef 527 SUPERFAMILY SSF56024 18 262 1.1E-18 T 14-10-2018 AMIS_63680 91419cf0c9197f7142391f6d75dafbef 527 SUPERFAMILY SSF56024 278 410 3.73E-19 T 14-10-2018 AMIS_7650 43303b6acd1e1ac7907bb9eb8744ef3d 225 SMART SM00986 41 215 3.5E-29 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMIS_7650 43303b6acd1e1ac7907bb9eb8744ef3d 225 SMART SM00987 41 215 3.5E-29 T 14-10-2018 AMIS_7650 43303b6acd1e1ac7907bb9eb8744ef3d 225 Gene3D G3DSA:3.40.470.10 1 224 9.9E-64 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMIS_7650 43303b6acd1e1ac7907bb9eb8744ef3d 225 SUPERFAMILY SSF52141 9 221 3.92E-42 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMIS_7650 43303b6acd1e1ac7907bb9eb8744ef3d 225 Pfam PF03167 Uracil DNA glycosylase superfamily 41 217 7.8E-27 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMIS_78140 dc9dc124aba25bf8500b775e5b83d3c2 242 Pfam PF00293 NUDIX domain 62 166 6.4E-8 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMIS_78140 dc9dc124aba25bf8500b775e5b83d3c2 242 Gene3D G3DSA:3.90.79.10 26 208 2.5E-37 T 14-10-2018 AMIS_78140 dc9dc124aba25bf8500b775e5b83d3c2 242 SUPERFAMILY SSF55811 60 201 1.35E-23 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMIS_33560 495864abfc45ec66ab2b98c68fc7df13 125 Pfam PF11042 Protein of unknown function (DUF2750) 26 122 1.5E-20 T 14-10-2018 IPR021284 Protein of unknown function DUF2750 AMIS_46230 7d784478827e364495fd222617c13feb 931 Gene3D G3DSA:1.10.10.10 857 916 3.3E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_46230 7d784478827e364495fd222617c13feb 931 SMART SM00421 860 917 8.7E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_46230 7d784478827e364495fd222617c13feb 931 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 877 893 1.7E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_46230 7d784478827e364495fd222617c13feb 931 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 863 877 1.7E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_46230 7d784478827e364495fd222617c13feb 931 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 893 905 1.7E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_46230 7d784478827e364495fd222617c13feb 931 SUPERFAMILY SSF46894 851 913 1.46E-14 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_46230 7d784478827e364495fd222617c13feb 931 Pfam PF13191 AAA ATPase domain 7 164 3.2E-19 T 14-10-2018 AMIS_46230 7d784478827e364495fd222617c13feb 931 SUPERFAMILY SSF52540 8 231 4.59E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_46230 7d784478827e364495fd222617c13feb 931 Pfam PF00196 Bacterial regulatory proteins, luxR family 862 912 1.3E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_73800 4b139402fae542b00af0df42fe46cde8 292 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 276 1.0E-27 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 AMIS_73590 f6d1ff490f319685565351d0e7080071 264 Gene3D G3DSA:3.40.50.150 32 263 8.0E-15 T 14-10-2018 AMIS_73590 f6d1ff490f319685565351d0e7080071 264 SUPERFAMILY SSF53335 63 224 5.94E-19 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_80580 8931d714c92636c100dcfe9b693c2288 355 SUPERFAMILY SSF69635 197 327 7.53E-23 T 14-10-2018 AMIS_80580 8931d714c92636c100dcfe9b693c2288 355 Gene3D G3DSA:3.30.1460.10 202 334 3.5E-6 T 14-10-2018 AMIS_70500 16f362688bf47a123f446b8fc879138b 117 ProSitePatterns PS00496 P-II protein uridylation site. 51 56 - T 14-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 AMIS_70500 16f362688bf47a123f446b8fc879138b 117 Gene3D G3DSA:3.30.70.120 1 117 4.3E-44 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AMIS_70500 16f362688bf47a123f446b8fc879138b 117 SMART SM00938 9 110 2.2E-56 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMIS_70500 16f362688bf47a123f446b8fc879138b 117 PIRSF PIRSF039144 6 117 2.1E-49 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMIS_70500 16f362688bf47a123f446b8fc879138b 117 Pfam PF00543 Nitrogen regulatory protein P-II 9 110 1.4E-38 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMIS_70500 16f362688bf47a123f446b8fc879138b 117 ProSitePatterns PS00638 P-II protein C-terminal region signature. 88 101 - T 14-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 AMIS_70500 16f362688bf47a123f446b8fc879138b 117 SUPERFAMILY SSF54913 6 117 9.85E-42 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AMIS_70500 16f362688bf47a123f446b8fc879138b 117 PRINTS PR00340 P-II protein signature 28 46 4.1E-37 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMIS_70500 16f362688bf47a123f446b8fc879138b 117 PRINTS PR00340 P-II protein signature 88 108 4.1E-37 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMIS_70500 16f362688bf47a123f446b8fc879138b 117 PRINTS PR00340 P-II protein signature 57 80 4.1E-37 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMIS_70500 16f362688bf47a123f446b8fc879138b 117 PRINTS PR00340 P-II protein signature 7 22 4.1E-37 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMIS_71450 51dbc80a9dd7c4e1b5b0cec2f6be6601 127 Pfam PF02656 Domain of unknown function (DUF202) 24 90 6.5E-15 T 14-10-2018 IPR003807 Domain of unknown function DUF202 AMIS_29630 e669379f3ded7ca5ff72bd71839c3b7d 275 SUPERFAMILY SSF51556 2 272 5.07E-58 T 14-10-2018 IPR032466 Metal-dependent hydrolase AMIS_29630 e669379f3ded7ca5ff72bd71839c3b7d 275 Gene3D G3DSA:3.20.20.140 1 274 4.7E-74 T 14-10-2018 AMIS_29630 e669379f3ded7ca5ff72bd71839c3b7d 275 Pfam PF04909 Amidohydrolase 3 271 7.0E-34 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AMIS_1340 8848f827ffbe4bc03778807942546133 173 Pfam PF04542 Sigma-70 region 2 14 80 2.1E-7 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_1340 8848f827ffbe4bc03778807942546133 173 Gene3D G3DSA:1.10.1740.10 2 80 1.3E-10 T 14-10-2018 AMIS_1340 8848f827ffbe4bc03778807942546133 173 SUPERFAMILY SSF88659 96 160 1.5E-16 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_1340 8848f827ffbe4bc03778807942546133 173 Gene3D G3DSA:1.10.10.10 86 164 2.8E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_1340 8848f827ffbe4bc03778807942546133 173 TIGRFAM TIGR02983 SigE-fam_strep: RNA polymerase sigma-70 factor, sigma-E family 5 162 2.9E-52 T 14-10-2018 IPR014325 RNA polymerase sigma-E factor, actinobacteria GO:0016987 AMIS_1340 8848f827ffbe4bc03778807942546133 173 Pfam PF08281 Sigma-70, region 4 103 156 1.0E-15 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_1340 8848f827ffbe4bc03778807942546133 173 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 10 158 3.4E-19 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_1340 8848f827ffbe4bc03778807942546133 173 SUPERFAMILY SSF88946 4 76 2.59E-12 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_63790 7d34cd1cb8de5576e51c72050c2952db 286 Gene3D G3DSA:3.10.270.10 1 285 1.6E-97 T 14-10-2018 AMIS_63790 7d34cd1cb8de5576e51c72050c2952db 286 ProDom PD003367 URICASE OXIDOREDUCTASE URATE OXIDASE METABOLISM PURINE PEROXISOME ACETYLATION II DIRECT 172 274 2.0E-29 T 14-10-2018 AMIS_63790 7d34cd1cb8de5576e51c72050c2952db 286 Pfam PF01014 Uricase 9 113 2.3E-15 T 14-10-2018 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 AMIS_63790 7d34cd1cb8de5576e51c72050c2952db 286 Pfam PF01014 Uricase 136 269 6.9E-29 T 14-10-2018 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 AMIS_63790 7d34cd1cb8de5576e51c72050c2952db 286 TIGRFAM TIGR03383 urate_oxi: urate oxidase 6 274 1.2E-93 T 14-10-2018 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 AMIS_63790 7d34cd1cb8de5576e51c72050c2952db 286 PIRSF PIRSF000241 2 281 2.5E-88 T 14-10-2018 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 AMIS_63790 7d34cd1cb8de5576e51c72050c2952db 286 SUPERFAMILY SSF55620 134 284 3.56E-51 T 14-10-2018 AMIS_63790 7d34cd1cb8de5576e51c72050c2952db 286 SUPERFAMILY SSF55620 4 128 1.65E-39 T 14-10-2018 AMIS_63790 7d34cd1cb8de5576e51c72050c2952db 286 PRINTS PR00093 Uricase signature 86 99 3.2E-20 T 14-10-2018 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 AMIS_63790 7d34cd1cb8de5576e51c72050c2952db 286 PRINTS PR00093 Uricase signature 11 22 3.2E-20 T 14-10-2018 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 AMIS_63790 7d34cd1cb8de5576e51c72050c2952db 286 PRINTS PR00093 Uricase signature 142 158 3.2E-20 T 14-10-2018 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 AMIS_63790 7d34cd1cb8de5576e51c72050c2952db 286 PRINTS PR00093 Uricase signature 158 170 3.2E-20 T 14-10-2018 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 AMIS_63790 7d34cd1cb8de5576e51c72050c2952db 286 PRINTS PR00093 Uricase signature 50 64 3.2E-20 T 14-10-2018 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 AMIS_80200 f0a0406b9b24f35dc90fc18d908f6c53 392 Gene3D G3DSA:3.40.50.2000 210 361 2.4E-21 T 14-10-2018 AMIS_80200 f0a0406b9b24f35dc90fc18d908f6c53 392 Pfam PF13579 Glycosyl transferase 4-like domain 29 202 8.0E-20 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AMIS_80200 f0a0406b9b24f35dc90fc18d908f6c53 392 Pfam PF13692 Glycosyl transferases group 1 217 345 1.0E-14 T 14-10-2018 AMIS_80200 f0a0406b9b24f35dc90fc18d908f6c53 392 SUPERFAMILY SSF53756 14 385 1.99E-46 T 14-10-2018 AMIS_21750 791619a0974d63d4ff44871a71476e67 151 SUPERFAMILY SSF50475 7 147 5.54E-32 T 14-10-2018 AMIS_21750 791619a0974d63d4ff44871a71476e67 151 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 14 97 3.2E-14 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AMIS_21750 791619a0974d63d4ff44871a71476e67 151 Gene3D G3DSA:2.30.110.10 9 150 3.3E-35 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AMIS_72990 12152b08ee1864e070a6e40d505ccd46 522 SUPERFAMILY SSF48452 20 277 9.36E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_72990 12152b08ee1864e070a6e40d505ccd46 522 SMART SM00028 241 274 13.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_72990 12152b08ee1864e070a6e40d505ccd46 522 SMART SM00028 209 240 13.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_14770 bbec48a64eca7b7fcccefcbaa3c9f77d 356 Pfam PF00348 Polyprenyl synthetase 44 301 1.1E-48 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 AMIS_14770 bbec48a64eca7b7fcccefcbaa3c9f77d 356 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 90 104 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site AMIS_14770 bbec48a64eca7b7fcccefcbaa3c9f77d 356 SUPERFAMILY SSF48576 18 355 3.91E-73 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily AMIS_14770 bbec48a64eca7b7fcccefcbaa3c9f77d 356 Gene3D G3DSA:1.10.600.10 1 356 1.5E-108 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily AMIS_14770 bbec48a64eca7b7fcccefcbaa3c9f77d 356 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 234 246 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site AMIS_30140 3b5d95e658c393ca31b10c42fb85f6b2 49 SUPERFAMILY SSF52821 14 46 2.62E-8 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily AMIS_30140 3b5d95e658c393ca31b10c42fb85f6b2 49 Gene3D G3DSA:3.40.250.10 8 49 3.1E-7 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily AMIS_39100 3157970b030e904d6e064e1d2caf6b58 250 SUPERFAMILY SSF53474 7 250 3.52E-35 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_39100 3157970b030e904d6e064e1d2caf6b58 250 Pfam PF12697 Alpha/beta hydrolase family 21 248 3.7E-22 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_39100 3157970b030e904d6e064e1d2caf6b58 250 PRINTS PR00111 Alpha/beta hydrolase fold signature 86 99 3.9E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_39100 3157970b030e904d6e064e1d2caf6b58 250 PRINTS PR00111 Alpha/beta hydrolase fold signature 43 58 3.9E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_39100 3157970b030e904d6e064e1d2caf6b58 250 Gene3D G3DSA:3.40.50.1820 6 250 1.6E-37 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_43470 32b0dde6f03eb12cc7efc94ab0cebaa3 168 TIGRFAM TIGR02159 PA_CoA_Oxy4: phenylacetate-CoA oxygenase, PaaJ subunit 15 168 1.4E-55 T 14-10-2018 IPR011883 Phenylacetate-CoA oxygenase, PaaJ subunit AMIS_43470 32b0dde6f03eb12cc7efc94ab0cebaa3 168 Gene3D G3DSA:3.30.300.130 2 98 1.3E-20 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily AMIS_43470 32b0dde6f03eb12cc7efc94ab0cebaa3 168 SUPERFAMILY SSF117916 4 98 3.17E-21 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily AMIS_43470 32b0dde6f03eb12cc7efc94ab0cebaa3 168 Pfam PF01883 Iron-sulfur cluster assembly protein 13 77 1.1E-11 T 14-10-2018 IPR002744 MIP18 family-like AMIS_29500 f0423e61927b669e01fb92f4d1e45c73 324 PIRSF PIRSF016838 2 319 5.3E-23 T 14-10-2018 IPR028349 Protein PafC AMIS_29500 f0423e61927b669e01fb92f4d1e45c73 324 ProSitePatterns PS00894 DeoR-type HTH domain signature. 7 41 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AMIS_29500 f0423e61927b669e01fb92f4d1e45c73 324 Pfam PF08279 HTH domain 7 62 5.8E-17 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 AMIS_29500 f0423e61927b669e01fb92f4d1e45c73 324 SUPERFAMILY SSF46785 5 62 1.3E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_29500 f0423e61927b669e01fb92f4d1e45c73 324 Pfam PF13280 WYL domain 143 312 3.6E-25 T 14-10-2018 IPR026881 WYL domain AMIS_29500 f0423e61927b669e01fb92f4d1e45c73 324 Gene3D G3DSA:1.10.10.10 4 65 7.7E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_6860 351f4bb6beef03766be284e461af2910 562 SUPERFAMILY SSF63411 16 168 4.71E-14 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMIS_6860 351f4bb6beef03766be284e461af2910 562 SUPERFAMILY SSF63411 222 357 1.22E-13 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMIS_6860 351f4bb6beef03766be284e461af2910 562 Gene3D G3DSA:3.30.830.10 9 176 1.2E-9 T 14-10-2018 AMIS_6860 351f4bb6beef03766be284e461af2910 562 Gene3D G3DSA:3.30.830.10 211 361 1.4E-16 T 14-10-2018 AMIS_62900 600ac1eaec83c66b1120328da70e6a33 206 Gene3D G3DSA:1.20.120.1760 10 203 2.8E-55 T 14-10-2018 AMIS_62900 600ac1eaec83c66b1120328da70e6a33 206 Pfam PF01066 CDP-alcohol phosphatidyltransferase 29 93 6.0E-11 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AMIS_62900 600ac1eaec83c66b1120328da70e6a33 206 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 71 93 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AMIS_8750 512d8de8a1c52d071613a81ba517b64a 612 Pfam PF10646 Sporulation and spore germination 185 286 9.9E-5 T 14-10-2018 IPR019606 GerMN domain AMIS_8750 512d8de8a1c52d071613a81ba517b64a 612 SUPERFAMILY SSF50969 429 527 1.65E-5 T 14-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like AMIS_8750 512d8de8a1c52d071613a81ba517b64a 612 Pfam PF10647 Lipoprotein LpqB beta-propeller domain 330 563 2.1E-8 T 14-10-2018 IPR018910 Lipoprotein LpqB, beta-propeller domain, C-terminal AMIS_9930 9974866c3d9bde7345f88e599a01dcb7 216 Pfam PF05719 Golgi phosphoprotein 3 (GPP34) 5 178 1.6E-31 T 14-10-2018 IPR008628 Golgi phosphoprotein 3-like GO:0070273 AMIS_9930 9974866c3d9bde7345f88e599a01dcb7 216 Gene3D G3DSA:1.10.3630.10 4 167 1.4E-7 T 14-10-2018 IPR038261 Golgi phosphoprotein 3-like domain superfamily AMIS_48590 178d04855b439a4cb706561eccc98111 299 SUPERFAMILY SSF51658 5 292 2.07E-43 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily AMIS_48590 178d04855b439a4cb706561eccc98111 299 Gene3D G3DSA:3.20.20.150 1 294 1.2E-55 T 14-10-2018 AMIS_48590 178d04855b439a4cb706561eccc98111 299 Pfam PF01261 Xylose isomerase-like TIM barrel 31 222 6.1E-28 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AMIS_4100 81e0619f1d53359233cf059f3aace9fd 345 Pfam PF03080 Neprosin 153 342 3.8E-28 T 14-10-2018 IPR004314 Neprosin AMIS_69480 746a4c9d6b9b0b531f07578654ca1871 129 Pfam PF04134 Protein of unknown function, DUF393 12 117 4.6E-11 T 14-10-2018 IPR007263 Protein of unknown function DUF393 AMIS_12320 3a874e3424d76f8ff14c4e3f7c84e924 339 Pfam PF02653 Branched-chain amino acid transport system / permease component 59 323 3.3E-44 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 AMIS_78850 7826704b4dfcbe5af3136849cbad122e 270 PIRSF PIRSF017393 2 270 6.1E-101 T 14-10-2018 IPR006764 S-adenosyl-L-methionine dependent methyltransferase, SAV2177 type AMIS_78850 7826704b4dfcbe5af3136849cbad122e 270 SUPERFAMILY SSF53335 18 252 2.67E-41 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_78850 7826704b4dfcbe5af3136849cbad122e 270 Gene3D G3DSA:3.40.50.150 2 270 4.1E-106 T 14-10-2018 AMIS_78850 7826704b4dfcbe5af3136849cbad122e 270 Pfam PF04672 S-adenosyl methyltransferase 11 270 1.3E-100 T 14-10-2018 IPR006764 S-adenosyl-L-methionine dependent methyltransferase, SAV2177 type AMIS_27030 6fe016d07c7be2e5a568bc05c5a77222 446 Pfam PF00171 Aldehyde dehydrogenase family 4 441 2.2E-119 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AMIS_27030 6fe016d07c7be2e5a568bc05c5a77222 446 Gene3D G3DSA:3.40.309.10 238 414 1.4E-128 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AMIS_27030 6fe016d07c7be2e5a568bc05c5a77222 446 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 259 270 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AMIS_27030 6fe016d07c7be2e5a568bc05c5a77222 446 SUPERFAMILY SSF53720 4 442 4.32E-121 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMIS_27030 6fe016d07c7be2e5a568bc05c5a77222 446 Gene3D G3DSA:3.40.605.10 4 437 1.4E-128 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AMIS_68560 f8725e2927649a1d7b9a5ed37bd55875 269 Pfam PF00459 Inositol monophosphatase family 7 238 2.1E-56 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMIS_68560 f8725e2927649a1d7b9a5ed37bd55875 269 SUPERFAMILY SSF56655 7 260 5.5E-70 T 14-10-2018 AMIS_68560 f8725e2927649a1d7b9a5ed37bd55875 269 Gene3D G3DSA:3.40.190.80 149 266 1.6E-34 T 14-10-2018 AMIS_68560 f8725e2927649a1d7b9a5ed37bd55875 269 Gene3D G3DSA:3.30.540.10 2 148 2.8E-41 T 14-10-2018 AMIS_68560 f8725e2927649a1d7b9a5ed37bd55875 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 136 159 9.7E-37 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMIS_68560 f8725e2927649a1d7b9a5ed37bd55875 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 182 203 9.7E-37 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMIS_68560 f8725e2927649a1d7b9a5ed37bd55875 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 65 81 9.7E-37 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMIS_68560 f8725e2927649a1d7b9a5ed37bd55875 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 87 103 9.7E-37 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMIS_68560 f8725e2927649a1d7b9a5ed37bd55875 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 213 237 9.7E-37 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMIS_68560 f8725e2927649a1d7b9a5ed37bd55875 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 43 63 9.7E-37 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMIS_68560 f8725e2927649a1d7b9a5ed37bd55875 269 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 87 100 - T 14-10-2018 IPR020583 Inositol monophosphatase, metal-binding site AMIS_75120 f2564f9db6619047ae4de8dc5b55e594 306 SUPERFAMILY SSF51556 39 303 4.87E-70 T 14-10-2018 IPR032466 Metal-dependent hydrolase AMIS_75120 f2564f9db6619047ae4de8dc5b55e594 306 Pfam PF01026 TatD related DNase 42 302 2.1E-64 T 14-10-2018 IPR001130 TatD family GO:0016788 AMIS_75120 f2564f9db6619047ae4de8dc5b55e594 306 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 41 302 1.3E-68 T 14-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 AMIS_75120 f2564f9db6619047ae4de8dc5b55e594 306 Gene3D G3DSA:3.20.20.140 36 303 7.8E-71 T 14-10-2018 AMIS_75120 f2564f9db6619047ae4de8dc5b55e594 306 PIRSF PIRSF005902 2 306 7.8E-68 T 14-10-2018 IPR001130 TatD family GO:0016788 AMIS_8240 ede97d96ea3f88583cf78d800ae4e73f 424 Pfam PF01547 Bacterial extracellular solute-binding protein 74 337 2.3E-22 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein AMIS_8240 ede97d96ea3f88583cf78d800ae4e73f 424 SUPERFAMILY SSF53850 16 349 7.85E-43 T 14-10-2018 AMIS_8240 ede97d96ea3f88583cf78d800ae4e73f 424 Gene3D G3DSA:3.40.190.10 146 413 2.6E-65 T 14-10-2018 AMIS_8240 ede97d96ea3f88583cf78d800ae4e73f 424 Gene3D G3DSA:3.40.190.10 67 384 2.6E-65 T 14-10-2018 AMIS_55450 a606bddce1b210d918d2a38f90851589 532 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 372 399 1.5E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_55450 a606bddce1b210d918d2a38f90851589 532 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 295 324 1.5E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_55450 a606bddce1b210d918d2a38f90851589 532 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 401 430 1.5E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_55450 a606bddce1b210d918d2a38f90851589 532 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 16 41 1.5E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_55450 a606bddce1b210d918d2a38f90851589 532 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 449 478 1.5E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_55450 a606bddce1b210d918d2a38f90851589 532 SMART SM00283 274 528 1.2E-53 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_55450 a606bddce1b210d918d2a38f90851589 532 Pfam PF00672 HAMP domain 214 261 1.1E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_55450 a606bddce1b210d918d2a38f90851589 532 Pfam PF12729 Four helix bundle sensory module for signal transduction 14 143 2.9E-10 T 14-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain AMIS_55450 a606bddce1b210d918d2a38f90851589 532 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 335 496 9.8E-34 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_55450 a606bddce1b210d918d2a38f90851589 532 SUPERFAMILY SSF58104 234 527 1.19E-62 T 14-10-2018 AMIS_55450 a606bddce1b210d918d2a38f90851589 532 SMART SM00304 214 266 8.3E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_55450 a606bddce1b210d918d2a38f90851589 532 SMART SM00304 315 385 59.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMIS_55450 a606bddce1b210d918d2a38f90851589 532 Gene3D G3DSA:1.10.287.950 214 530 2.0E-65 T 14-10-2018 AMIS_75780 a5a7d17b7b7d526a448cc998fc8d73db 337 SUPERFAMILY SSF55729 207 325 4.04E-6 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_75780 a5a7d17b7b7d526a448cc998fc8d73db 337 Gene3D G3DSA:3.40.630.30 1 329 8.2E-65 T 14-10-2018 AMIS_75780 a5a7d17b7b7d526a448cc998fc8d73db 337 SUPERFAMILY SSF55729 9 142 1.32E-17 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_75780 a5a7d17b7b7d526a448cc998fc8d73db 337 Pfam PF13508 Acetyltransferase (GNAT) domain 56 141 2.5E-10 T 14-10-2018 IPR000182 GNAT domain AMIS_22940 3e4b415989c12ee0a8665eb548909106 346 Pfam PF07853 Protein of unknown function (DUF1648) 12 58 6.0E-8 T 14-10-2018 IPR012867 Domain of unknown function DUF1648 AMIS_24100 4590f13dce21872b96dd2b218727b1c0 95 Pfam PF10905 Protein of unknown function (DUF2695) 36 87 6.4E-21 T 14-10-2018 IPR024248 Protein of unknown function DUF2695 AMIS_24100 4590f13dce21872b96dd2b218727b1c0 95 ProDom PD067169 MB2294 RV2271/MT2332 45 95 4.0E-6 T 14-10-2018 IPR024248 Protein of unknown function DUF2695 AMIS_43030 98bc35568c40baa1d0982c99614a6c4d 149 Pfam PF14342 Domain of unknown function (DUF4396) 4 136 7.7E-43 T 14-10-2018 IPR025509 Domain of unknown function DUF4396 AMIS_35000 0e488aa42bd0da01b96c528e5b5a86d7 522 SUPERFAMILY SSF51445 231 486 8.84E-27 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_35000 0e488aa42bd0da01b96c528e5b5a86d7 522 Gene3D G3DSA:3.20.20.80 221 512 1.5E-52 T 14-10-2018 AMIS_54130 1541dd897122618e173c2f0711dc8ac4 151 Pfam PF00486 Transcriptional regulatory protein, C terminal 69 139 1.4E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_54130 1541dd897122618e173c2f0711dc8ac4 151 Gene3D G3DSA:1.10.10.10 48 147 1.2E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_54130 1541dd897122618e173c2f0711dc8ac4 151 SUPERFAMILY SSF46894 53 139 2.67E-24 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_54130 1541dd897122618e173c2f0711dc8ac4 151 SMART SM00862 67 139 1.9E-26 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_1690 8bebc44e7cd7eff8d248a91be25782ad 134 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 36 130 2.1E-9 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_1690 8bebc44e7cd7eff8d248a91be25782ad 134 SMART SM00387 35 134 2.1E-9 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_1690 8bebc44e7cd7eff8d248a91be25782ad 134 SUPERFAMILY SSF55874 24 130 1.83E-16 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_1690 8bebc44e7cd7eff8d248a91be25782ad 134 Gene3D G3DSA:3.30.565.10 5 133 9.1E-20 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_13010 6f479fa19cead791877d3d41165534a9 318 Pfam PF12697 Alpha/beta hydrolase family 29 286 5.8E-24 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_13010 6f479fa19cead791877d3d41165534a9 318 Gene3D G3DSA:3.40.50.1820 2 303 2.0E-56 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_13010 6f479fa19cead791877d3d41165534a9 318 SUPERFAMILY SSF53474 6 290 2.01E-53 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_13010 6f479fa19cead791877d3d41165534a9 318 PRINTS PR00412 Epoxide hydrolase signature 270 292 1.1E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_13010 6f479fa19cead791877d3d41165534a9 318 PRINTS PR00412 Epoxide hydrolase signature 237 253 1.1E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_13010 6f479fa19cead791877d3d41165534a9 318 PRINTS PR00412 Epoxide hydrolase signature 33 51 1.1E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_13010 6f479fa19cead791877d3d41165534a9 318 PRINTS PR00412 Epoxide hydrolase signature 56 71 1.1E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_1080 dd0ded9ddb2b00c485ddc99b4ae49822 140 Pfam PF11349 Protein of unknown function (DUF3151) 7 137 8.9E-55 T 14-10-2018 IPR014487 Protein of unknown function DUF3151 AMIS_1080 dd0ded9ddb2b00c485ddc99b4ae49822 140 PIRSF PIRSF017349 1 140 6.0E-51 T 14-10-2018 IPR014487 Protein of unknown function DUF3151 AMIS_74950 5eef9fc8f95dba72d96d22bd2309c936 275 SUPERFAMILY SSF55874 178 259 1.36E-8 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_74950 5eef9fc8f95dba72d96d22bd2309c936 275 Gene3D G3DSA:3.30.565.10 140 271 2.8E-22 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_54810 928966a47eb97633f76dc67b31469979 426 Pfam PF01384 Phosphate transporter family 39 359 3.7E-77 T 14-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 AMIS_46850 3e23080dd10cab701152096fb8305a45 766 SUPERFAMILY SSF101898 519 748 1.33E-6 T 14-10-2018 AMIS_46850 3e23080dd10cab701152096fb8305a45 766 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 42 316 1.4E-11 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase AMIS_46850 3e23080dd10cab701152096fb8305a45 766 SUPERFAMILY SSF56219 32 326 3.4E-31 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AMIS_46850 3e23080dd10cab701152096fb8305a45 766 Gene3D G3DSA:2.60.40.10 327 417 5.3E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_46850 3e23080dd10cab701152096fb8305a45 766 SUPERFAMILY SSF49299 332 414 3.92E-8 T 14-10-2018 IPR035986 PKD domain superfamily AMIS_46850 3e23080dd10cab701152096fb8305a45 766 Gene3D G3DSA:3.60.10.10 38 324 9.5E-37 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AMIS_46850 3e23080dd10cab701152096fb8305a45 766 Gene3D G3DSA:2.60.40.10 424 514 1.8E-7 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_19230 0f080088f5ecef5c11b08492ac163543 322 Gene3D G3DSA:1.10.540.10 1 112 2.2E-26 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMIS_19230 0f080088f5ecef5c11b08492ac163543 322 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 186 320 3.7E-30 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMIS_19230 0f080088f5ecef5c11b08492ac163543 322 SUPERFAMILY SSF47203 182 322 7.41E-40 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMIS_19230 0f080088f5ecef5c11b08492ac163543 322 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 2 110 6.7E-21 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMIS_19230 0f080088f5ecef5c11b08492ac163543 322 Gene3D G3DSA:1.20.140.10 182 321 2.2E-39 T 14-10-2018 AMIS_19230 0f080088f5ecef5c11b08492ac163543 322 SUPERFAMILY SSF56645 1 116 9.16E-22 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMIS_73010 bc0433aca2c5b6baddf8fe539636ae53 92 Pfam PF13490 Putative zinc-finger 10 43 2.8E-6 T 14-10-2018 IPR027383 Putative zinc-finger AMIS_73010 bc0433aca2c5b6baddf8fe539636ae53 92 TIGRFAM TIGR03988 antisig_RsrA: mycothiol system anti-sigma-R factor 9 84 9.6E-28 T 14-10-2018 IPR024020 Anti sigma-R factor, mycothiol system,RsrA AMIS_73010 bc0433aca2c5b6baddf8fe539636ae53 92 TIGRFAM TIGR02949 anti_SigH_actin: anti-sigma factor, TIGR02949 family 5 82 6.6E-25 T 14-10-2018 IPR014295 Anti-sigma factor AMIS_10030 7c381fc9d797c55622dc2f69191c50c4 698 Gene3D G3DSA:2.60.40.1180 609 694 3.4E-15 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta AMIS_10030 7c381fc9d797c55622dc2f69191c50c4 698 Pfam PF14498 Glycosyl hydrolase family 65, N-terminal domain 15 161 6.7E-15 T 14-10-2018 IPR027414 Glycosyl hydrolase family 95, N-terminal domain KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807 AMIS_10030 7c381fc9d797c55622dc2f69191c50c4 698 SUPERFAMILY SSF48208 231 678 8.5E-50 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AMIS_10030 7c381fc9d797c55622dc2f69191c50c4 698 Gene3D G3DSA:1.50.10.10 259 608 1.5E-51 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 AMIS_10030 7c381fc9d797c55622dc2f69191c50c4 698 Gene3D G3DSA:2.70.98.50 12 189 2.4E-19 T 14-10-2018 AMIS_41360 d7aaea119c5d5f7b052ead62c2e9ce06 281 Pfam PF12294 Protein of unknown function (DUF3626) 4 270 1.2E-76 T 14-10-2018 IPR022074 Protein of unknown function DUF3626 AMIS_22240 e1592d5064b106a4d3f03ef8a7892a2f 263 Pfam PF00999 Sodium/hydrogen exchanger family 6 242 8.9E-16 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AMIS_18720 65438ae80b965fd8cc39ecaa3876ed9a 248 SUPERFAMILY SSF56281 10 238 9.04E-43 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMIS_18720 65438ae80b965fd8cc39ecaa3876ed9a 248 SMART SM00849 66 229 1.0E-28 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMIS_18720 65438ae80b965fd8cc39ecaa3876ed9a 248 Gene3D G3DSA:3.60.15.10 38 248 1.6E-41 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMIS_18720 65438ae80b965fd8cc39ecaa3876ed9a 248 Pfam PF00753 Metallo-beta-lactamase superfamily 65 229 6.1E-24 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMIS_59550 330974dceabee0ae601884eecd59fb95 166 Pfam PF06271 RDD family 65 159 3.6E-12 T 14-10-2018 IPR010432 RDD AMIS_10520 abe0d06ada57487afd0575d563ce9560 309 Pfam PF00877 NlpC/P60 family 210 292 8.8E-20 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain AMIS_10520 abe0d06ada57487afd0575d563ce9560 309 Gene3D G3DSA:3.90.1720.10 113 301 5.7E-41 T 14-10-2018 AMIS_10520 abe0d06ada57487afd0575d563ce9560 309 SUPERFAMILY SSF54001 193 298 1.86E-31 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily AMIS_45570 dceb4ad84c6cdedd91878614a4e1de94 282 Pfam PF00950 ABC 3 transport family 2 253 3.6E-50 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 AMIS_45570 dceb4ad84c6cdedd91878614a4e1de94 282 SUPERFAMILY SSF81345 4 248 1.44E-27 T 14-10-2018 IPR037294 ABC transporter, BtuC-like AMIS_820 ad21a50a2a224a657f91528e866278ed 568 Gene3D G3DSA:3.40.50.300 51 231 7.1E-12 T 14-10-2018 AMIS_820 ad21a50a2a224a657f91528e866278ed 568 SUPERFAMILY SSF52540 50 232 5.76E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_16990 02ab30c52797f5af716d89760f6eb9bf 544 Gene3D G3DSA:3.30.70.370 296 535 3.1E-25 T 14-10-2018 AMIS_16990 02ab30c52797f5af716d89760f6eb9bf 544 SUPERFAMILY SSF56672 155 543 3.78E-61 T 14-10-2018 AMIS_16990 02ab30c52797f5af716d89760f6eb9bf 544 PRINTS PR00868 DNA-polymerase family A (pol I) signature 324 347 4.9E-6 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMIS_16990 02ab30c52797f5af716d89760f6eb9bf 544 PRINTS PR00868 DNA-polymerase family A (pol I) signature 458 474 4.9E-6 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMIS_16990 02ab30c52797f5af716d89760f6eb9bf 544 PRINTS PR00868 DNA-polymerase family A (pol I) signature 486 499 4.9E-6 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMIS_16990 02ab30c52797f5af716d89760f6eb9bf 544 Gene3D G3DSA:1.10.150.20 333 465 3.1E-25 T 14-10-2018 AMIS_16990 02ab30c52797f5af716d89760f6eb9bf 544 SMART SM00482 310 503 2.9E-10 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMIS_16990 02ab30c52797f5af716d89760f6eb9bf 544 Pfam PF00476 DNA polymerase family A 202 536 1.8E-24 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMIS_74560 2299835c04f6252bbedb4b6df433912b 320 Pfam PF00583 Acetyltransferase (GNAT) family 203 302 3.1E-7 T 14-10-2018 IPR000182 GNAT domain AMIS_74560 2299835c04f6252bbedb4b6df433912b 320 SUPERFAMILY SSF55729 6 149 2.44E-7 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_74560 2299835c04f6252bbedb4b6df433912b 320 SUPERFAMILY SSF55729 103 309 2.19E-19 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_74560 2299835c04f6252bbedb4b6df433912b 320 Gene3D G3DSA:3.40.630.30 1 320 2.3E-54 T 14-10-2018 AMIS_61340 f9ba13c7170bb76eb53c9c015c188dcc 267 Gene3D G3DSA:3.40.1190.20 8 267 7.9E-58 T 14-10-2018 IPR029056 Ribokinase-like AMIS_61340 f9ba13c7170bb76eb53c9c015c188dcc 267 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 15 263 7.2E-44 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AMIS_61340 f9ba13c7170bb76eb53c9c015c188dcc 267 Pfam PF01256 Carbohydrate kinase 25 259 4.0E-41 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AMIS_61340 f9ba13c7170bb76eb53c9c015c188dcc 267 SUPERFAMILY SSF53613 8 260 4.21E-47 T 14-10-2018 IPR029056 Ribokinase-like AMIS_61340 f9ba13c7170bb76eb53c9c015c188dcc 267 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 2 265 17.495 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AMIS_63920 3af7c9b1d50b728874bee796913b34fe 413 Pfam PF13439 Glycosyltransferase Family 4 15 192 2.0E-35 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AMIS_63920 3af7c9b1d50b728874bee796913b34fe 413 Gene3D G3DSA:3.40.50.2000 5 383 3.5E-106 T 14-10-2018 AMIS_63920 3af7c9b1d50b728874bee796913b34fe 413 Pfam PF00534 Glycosyl transferases group 1 211 364 8.0E-38 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 AMIS_63920 3af7c9b1d50b728874bee796913b34fe 413 Gene3D G3DSA:3.40.50.2000 190 366 3.5E-106 T 14-10-2018 AMIS_63920 3af7c9b1d50b728874bee796913b34fe 413 SUPERFAMILY SSF53756 2 386 2.74E-100 T 14-10-2018 AMIS_30720 ecde7807168f3a4194510d4d458a6912 402 PRINTS PR01035 Tetracycline resistance protein signature 113 134 2.7E-6 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMIS_30720 ecde7807168f3a4194510d4d458a6912 402 PRINTS PR01035 Tetracycline resistance protein signature 345 368 2.7E-6 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMIS_30720 ecde7807168f3a4194510d4d458a6912 402 PRINTS PR01035 Tetracycline resistance protein signature 30 46 2.7E-6 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMIS_30720 ecde7807168f3a4194510d4d458a6912 402 PRINTS PR01035 Tetracycline resistance protein signature 174 194 2.7E-6 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMIS_30720 ecde7807168f3a4194510d4d458a6912 402 Gene3D G3DSA:1.20.1250.20 8 394 3.9E-59 T 14-10-2018 AMIS_30720 ecde7807168f3a4194510d4d458a6912 402 Pfam PF07690 Major Facilitator Superfamily 26 361 1.4E-35 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_30720 ecde7807168f3a4194510d4d458a6912 402 SUPERFAMILY SSF103473 17 393 2.75E-52 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_25930 909896c36a9e0d9fd9912f282d7f14e0 180 SUPERFAMILY SSF53474 11 145 1.12E-14 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_25930 909896c36a9e0d9fd9912f282d7f14e0 180 Gene3D G3DSA:3.40.50.1820 6 163 6.1E-28 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_44780 06dd68bc6facec120b8e227fffe7ac0f 301 SUPERFAMILY SSF52540 3 234 2.04E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_44780 06dd68bc6facec120b8e227fffe7ac0f 301 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_44780 06dd68bc6facec120b8e227fffe7ac0f 301 SMART SM00382 28 205 4.2E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_44780 06dd68bc6facec120b8e227fffe7ac0f 301 Pfam PF00005 ABC transporter 20 157 5.4E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_44780 06dd68bc6facec120b8e227fffe7ac0f 301 Gene3D G3DSA:3.40.50.300 1 229 1.8E-63 T 14-10-2018 AMIS_27180 4b3bc687eb97b1a1815d571c524451cb 444 Gene3D G3DSA:1.20.1250.20 252 443 8.1E-20 T 14-10-2018 AMIS_27180 4b3bc687eb97b1a1815d571c524451cb 444 Gene3D G3DSA:1.20.1250.20 40 228 9.0E-16 T 14-10-2018 AMIS_27180 4b3bc687eb97b1a1815d571c524451cb 444 SUPERFAMILY SSF103473 48 441 4.05E-36 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_27180 4b3bc687eb97b1a1815d571c524451cb 444 Pfam PF07690 Major Facilitator Superfamily 45 231 2.4E-13 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_27180 4b3bc687eb97b1a1815d571c524451cb 444 Pfam PF07690 Major Facilitator Superfamily 262 431 9.4E-10 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_80830 5036ddfea480577b8318dfd2ec9e1873 126 Pfam PF13453 Transcription factor zinc-finger 4 41 1.7E-18 T 14-10-2018 IPR027392 Transcription factor zinc-finger AMIS_74320 c5a4ea06210bdce7eea5cf194b6fc440 237 SUPERFAMILY SSF53955 164 228 4.38E-8 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily AMIS_36460 9e81b99f85b08b686f566111e5527bab 512 SUPERFAMILY SSF53187 48 326 1.34E-69 T 14-10-2018 AMIS_36460 9e81b99f85b08b686f566111e5527bab 512 SUPERFAMILY SSF49899 337 510 2.37E-6 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily AMIS_36460 9e81b99f85b08b686f566111e5527bab 512 Pfam PF04389 Peptidase family M28 104 321 1.4E-45 T 14-10-2018 IPR007484 Peptidase M28 AMIS_36460 9e81b99f85b08b686f566111e5527bab 512 Gene3D G3DSA:3.40.630.10 39 328 4.3E-82 T 14-10-2018 AMIS_25960 d8384b973ca4f38e62cd9902ac9dd2cc 1409 Pfam PF12770 CHAT domain 102 368 1.5E-10 T 14-10-2018 IPR024983 CHAT domain AMIS_25960 d8384b973ca4f38e62cd9902ac9dd2cc 1409 Gene3D G3DSA:1.25.40.10 1003 1148 8.9E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_25960 d8384b973ca4f38e62cd9902ac9dd2cc 1409 Gene3D G3DSA:3.40.50.300 413 583 3.8E-15 T 14-10-2018 AMIS_25960 d8384b973ca4f38e62cd9902ac9dd2cc 1409 SUPERFAMILY SSF52540 417 644 7.31E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_53380 fc422e14b21b7d51232dca32c6a275c9 235 Pfam PF00459 Inositol monophosphatase family 10 225 5.3E-34 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMIS_53380 fc422e14b21b7d51232dca32c6a275c9 235 PRINTS PR00377 Inositol monophosphatase superfamily signature 183 207 1.3E-17 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMIS_53380 fc422e14b21b7d51232dca32c6a275c9 235 PRINTS PR00377 Inositol monophosphatase superfamily signature 36 52 1.3E-17 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMIS_53380 fc422e14b21b7d51232dca32c6a275c9 235 PRINTS PR00377 Inositol monophosphatase superfamily signature 14 34 1.3E-17 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMIS_53380 fc422e14b21b7d51232dca32c6a275c9 235 PRINTS PR00377 Inositol monophosphatase superfamily signature 56 72 1.3E-17 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMIS_53380 fc422e14b21b7d51232dca32c6a275c9 235 Gene3D G3DSA:3.40.190.80 163 235 3.9E-12 T 14-10-2018 AMIS_53380 fc422e14b21b7d51232dca32c6a275c9 235 SUPERFAMILY SSF56655 5 233 5.89E-48 T 14-10-2018 AMIS_53380 fc422e14b21b7d51232dca32c6a275c9 235 Gene3D G3DSA:3.30.540.10 4 114 2.4E-30 T 14-10-2018 AMIS_68160 d363cd6cd9cc3f31c7c8ad6f3f6486ca 151 Pfam PF00583 Acetyltransferase (GNAT) family 36 140 2.0E-18 T 14-10-2018 IPR000182 GNAT domain AMIS_68160 d363cd6cd9cc3f31c7c8ad6f3f6486ca 151 Gene3D G3DSA:3.40.630.30 1 151 1.1E-36 T 14-10-2018 AMIS_68160 d363cd6cd9cc3f31c7c8ad6f3f6486ca 151 SUPERFAMILY SSF55729 1 148 1.47E-29 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_64210 d7d0d1158107f54afafcf3942e4eb485 116 Pfam PF11774 Lsr2 1 113 4.4E-40 T 14-10-2018 IPR024412 Lsr2 AMIS_64210 d7d0d1158107f54afafcf3942e4eb485 116 Gene3D G3DSA:3.30.60.230 1 59 3.8E-25 T 14-10-2018 AMIS_64210 d7d0d1158107f54afafcf3942e4eb485 116 Gene3D G3DSA:1.20.890.50 80 115 1.3E-14 T 14-10-2018 AMIS_64210 d7d0d1158107f54afafcf3942e4eb485 116 ProDom PD026347 LSR2-LIKE LSR2 ANTIGEN IMMUNE PRECURSOR RESPONSE SIGNAL PLASMID LYSYL GP61 1 110 5.0E-23 T 14-10-2018 IPR024412 Lsr2 AMIS_13930 f7737e11b9982d37fb6d78cb53e9fa6c 256 Pfam PF02654 Cobalamin-5-phosphate synthase 16 247 7.2E-47 T 14-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 AMIS_13930 f7737e11b9982d37fb6d78cb53e9fa6c 256 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 256 39.845 T 14-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 AMIS_22730 1f240e6f4bb2aaffeb4568656eb92dca 75 Pfam PF09360 Iron-binding zinc finger CDGSH type 10 55 2.4E-19 T 14-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 AMIS_22730 1f240e6f4bb2aaffeb4568656eb92dca 75 Gene3D G3DSA:3.40.5.90 2 65 6.4E-16 T 14-10-2018 AMIS_22730 1f240e6f4bb2aaffeb4568656eb92dca 75 SMART SM00704 22 60 7.5E-10 T 14-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 AMIS_2190 e0b6a6e4b4dcc48c08202d9229d9a414 271 Pfam PF04434 SWIM zinc finger 138 161 6.4E-5 T 14-10-2018 IPR007527 Zinc finger, SWIM-type GO:0008270 AMIS_15050 9f9f35aecac667078c70e150422de3c5 395 SUPERFAMILY SSF53649 59 391 1.37E-49 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AMIS_15050 9f9f35aecac667078c70e150422de3c5 395 Gene3D G3DSA:3.40.720.10 53 394 1.5E-36 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AMIS_15050 9f9f35aecac667078c70e150422de3c5 395 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 59 371 9.6E-28 T 14-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 AMIS_35510 0fdb861724f00878fdefb581b25bea6c 129 Gene3D G3DSA:3.10.180.10 2 129 8.2E-29 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_35510 0fdb861724f00878fdefb581b25bea6c 129 SUPERFAMILY SSF54593 4 128 7.75E-12 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_48840 ee5cbaae7f391a2202dcdfe1f441f878 196 SUPERFAMILY SSF53335 13 190 2.26E-32 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_48840 ee5cbaae7f391a2202dcdfe1f441f878 196 Pfam PF13649 Methyltransferase domain 52 142 2.6E-17 T 14-10-2018 AMIS_48840 ee5cbaae7f391a2202dcdfe1f441f878 196 Gene3D G3DSA:3.40.50.150 4 196 7.0E-53 T 14-10-2018 AMIS_39490 58f58d461bcbfb8b839bf79d1f1cff07 159 Pfam PF00583 Acetyltransferase (GNAT) family 49 135 3.0E-11 T 14-10-2018 IPR000182 GNAT domain AMIS_39490 58f58d461bcbfb8b839bf79d1f1cff07 159 SUPERFAMILY SSF55729 2 146 1.65E-25 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_39490 58f58d461bcbfb8b839bf79d1f1cff07 159 Gene3D G3DSA:3.40.630.30 1 142 1.0E-21 T 14-10-2018 AMIS_18360 54ce834d71148f86e5fc8b32010980d0 413 Pfam PF01384 Phosphate transporter family 33 353 3.0E-77 T 14-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 AMIS_36410 b0f430d1d1a73359eba4ed9341e2928d 140 PRINTS PR01438 Universal stress protein signature 93 105 3.1E-8 T 14-10-2018 IPR006015 Universal stress protein A AMIS_36410 b0f430d1d1a73359eba4ed9341e2928d 140 PRINTS PR01438 Universal stress protein signature 111 133 3.1E-8 T 14-10-2018 IPR006015 Universal stress protein A AMIS_36410 b0f430d1d1a73359eba4ed9341e2928d 140 Gene3D G3DSA:3.40.50.620 1 134 1.8E-21 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMIS_36410 b0f430d1d1a73359eba4ed9341e2928d 140 Pfam PF00582 Universal stress protein family 2 132 1.4E-17 T 14-10-2018 IPR006016 UspA AMIS_36410 b0f430d1d1a73359eba4ed9341e2928d 140 SUPERFAMILY SSF52402 1 135 1.95E-23 T 14-10-2018 AMIS_61910 85b8df9823157000a2a7189f4b557088 279 SUPERFAMILY SSF161098 66 257 8.94E-30 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_61910 85b8df9823157000a2a7189f4b557088 279 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 267 2.8E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_61910 85b8df9823157000a2a7189f4b557088 279 Gene3D G3DSA:1.10.3720.10 54 275 2.1E-38 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_61910 85b8df9823157000a2a7189f4b557088 279 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 65 167 3.4E-15 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 AMIS_25710 4d94b68d335f4f3fd37be6a0f397e48b 120 Pfam PF00072 Response regulator receiver domain 7 107 9.7E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_25710 4d94b68d335f4f3fd37be6a0f397e48b 120 SMART SM00448 4 120 3.0E-16 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_25710 4d94b68d335f4f3fd37be6a0f397e48b 120 Gene3D G3DSA:3.40.50.2300 2 120 2.9E-20 T 14-10-2018 AMIS_25710 4d94b68d335f4f3fd37be6a0f397e48b 120 SUPERFAMILY SSF52172 4 106 1.12E-21 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_32350 20354ca5223ac6005332dd1bb18e3383 224 Pfam PF01596 O-methyltransferase 26 223 4.2E-66 T 14-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 AMIS_32350 20354ca5223ac6005332dd1bb18e3383 224 SUPERFAMILY SSF53335 14 224 3.61E-46 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_32350 20354ca5223ac6005332dd1bb18e3383 224 Gene3D G3DSA:3.40.50.150 3 224 2.1E-72 T 14-10-2018 AMIS_71460 fac9a32ede8fc5277bbf9fd62dbb7e9b 107 Pfam PF02656 Domain of unknown function (DUF202) 11 71 5.9E-7 T 14-10-2018 IPR003807 Domain of unknown function DUF202 AMIS_9160 6ea3e44846ea1ff3f672313ac7ce99f1 94 Gene3D G3DSA:2.170.150.40 3 94 1.7E-27 T 14-10-2018 AMIS_9160 6ea3e44846ea1ff3f672313ac7ce99f1 94 Pfam PF04248 Domain of unknown function (DUF427) 3 88 1.1E-30 T 14-10-2018 IPR007361 Domain of unknown function DUF427 AMIS_46440 bdb613bf1f01e8a1315c607015e8dca2 300 SUPERFAMILY SSF56752 13 290 1.18E-69 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 AMIS_46440 bdb613bf1f01e8a1315c607015e8dca2 300 Gene3D G3DSA:3.30.470.10 11 134 5.7E-29 T 14-10-2018 AMIS_46440 bdb613bf1f01e8a1315c607015e8dca2 300 Gene3D G3DSA:3.20.10.10 135 297 1.9E-49 T 14-10-2018 AMIS_46440 bdb613bf1f01e8a1315c607015e8dca2 300 Pfam PF01063 Amino-transferase class IV 41 264 3.5E-39 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 AMIS_1660 ce6e83975249001794c5ab3aca56efdf 117 Gene3D G3DSA:3.30.750.24 1 113 2.3E-35 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_1660 ce6e83975249001794c5ab3aca56efdf 117 Pfam PF01740 STAS domain 5 108 1.2E-19 T 14-10-2018 IPR002645 STAS domain AMIS_1660 ce6e83975249001794c5ab3aca56efdf 117 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 1 107 3.3E-29 T 14-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 AMIS_1660 ce6e83975249001794c5ab3aca56efdf 117 SUPERFAMILY SSF52091 3 109 4.51E-28 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_41350 9b4b3deaa9dba5e2cf7651ade101defe 278 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 270 16.872 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 AMIS_41350 9b4b3deaa9dba5e2cf7651ade101defe 278 Pfam PF02673 Bacitracin resistance protein BacA 6 264 2.0E-77 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 AMIS_41350 9b4b3deaa9dba5e2cf7651ade101defe 278 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 6 263 6.4E-69 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 AMIS_18320 837068d8a1f43117672e1008a772becc 502 SUPERFAMILY SSF53335 90 221 8.54E-10 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_18320 837068d8a1f43117672e1008a772becc 502 Gene3D G3DSA:3.40.50.150 66 226 2.7E-8 T 14-10-2018 AMIS_3020 9944ffb7dfb96b364bb6ce6299cfb50b 126 Pfam PF04020 Mycobacterial 4 TMS phage holin, superfamily IV 1 116 4.3E-28 T 14-10-2018 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV AMIS_53300 6478eec133fe6ac875caee35a840bcd6 492 SMART SM00331 202 438 0.007 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_53300 6478eec133fe6ac875caee35a840bcd6 492 SUPERFAMILY SSF81606 103 438 4.71E-37 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_53300 6478eec133fe6ac875caee35a840bcd6 492 SMART SM00332 90 436 1.1E-5 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_53300 6478eec133fe6ac875caee35a840bcd6 492 Pfam PF13672 Protein phosphatase 2C 111 405 3.5E-8 T 14-10-2018 AMIS_26090 e707f43ad9608fd67ef270802b7b0dc6 227 SUPERFAMILY SSF46894 120 223 1.08E-25 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_26090 e707f43ad9608fd67ef270802b7b0dc6 227 Gene3D G3DSA:3.40.50.2300 1 123 1.2E-35 T 14-10-2018 AMIS_26090 e707f43ad9608fd67ef270802b7b0dc6 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 222 4.7E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_26090 e707f43ad9608fd67ef270802b7b0dc6 227 Gene3D G3DSA:1.10.10.10 124 226 6.8E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_26090 e707f43ad9608fd67ef270802b7b0dc6 227 SUPERFAMILY SSF52172 2 125 4.27E-40 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_26090 e707f43ad9608fd67ef270802b7b0dc6 227 Pfam PF00072 Response regulator receiver domain 5 114 3.9E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_26090 e707f43ad9608fd67ef270802b7b0dc6 227 SMART SM00448 3 113 5.4E-40 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_26090 e707f43ad9608fd67ef270802b7b0dc6 227 SMART SM00862 146 222 1.1E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_33900 8f05abd0a678084139ee387fc22c5014 351 SUPERFAMILY SSF117892 63 191 5.75E-8 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily AMIS_33900 8f05abd0a678084139ee387fc22c5014 351 Pfam PF01145 SPFH domain / Band 7 family 32 206 8.0E-17 T 14-10-2018 IPR001107 Band 7 domain AMIS_57100 b5f6f55431fd056423cb4389e7205cb1 424 Gene3D G3DSA:1.10.4100.10 26 268 1.5E-92 T 14-10-2018 AMIS_57100 b5f6f55431fd056423cb4389e7205cb1 424 Pfam PF03972 MmgE/PrpD family 8 369 4.6E-93 T 14-10-2018 IPR005656 MmgE/PrpD GO:0016829 AMIS_57100 b5f6f55431fd056423cb4389e7205cb1 424 SUPERFAMILY SSF103378 6 382 3.92E-86 T 14-10-2018 IPR036148 MmgE/PrpD superfamily GO:0016829 AMIS_57100 b5f6f55431fd056423cb4389e7205cb1 424 Gene3D G3DSA:3.30.1330.120 269 389 1.5E-92 T 14-10-2018 AMIS_37290 1db494a108f7c4948b70a1f9b8e83e0e 292 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 286 2.0E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_37290 1db494a108f7c4948b70a1f9b8e83e0e 292 Gene3D G3DSA:1.10.3720.10 13 284 6.3E-52 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_37290 1db494a108f7c4948b70a1f9b8e83e0e 292 SUPERFAMILY SSF161098 19 292 1.96E-60 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_23510 84634bf811cb67958ae8dc960126f575 245 Gene3D G3DSA:3.40.50.10490 1 238 2.4E-72 T 14-10-2018 AMIS_23510 84634bf811cb67958ae8dc960126f575 245 Pfam PF13580 SIS domain 2 141 3.4E-37 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AMIS_23510 84634bf811cb67958ae8dc960126f575 245 SUPERFAMILY SSF53697 4 205 2.67E-18 T 14-10-2018 AMIS_33380 e95ab52923962de3a282cafae039f3ce 264 SUPERFAMILY SSF161098 54 247 3.79E-38 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_33380 e95ab52923962de3a282cafae039f3ce 264 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 53 152 5.0E-18 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 AMIS_33380 e95ab52923962de3a282cafae039f3ce 264 Gene3D G3DSA:1.10.3720.10 49 263 7.5E-46 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_33380 e95ab52923962de3a282cafae039f3ce 264 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 72 260 1.3E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_79410 cbf7a7e7b10f4b35afc91a4185aa8889 188 SUPERFAMILY SSF48498 79 185 2.7E-17 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_79410 cbf7a7e7b10f4b35afc91a4185aa8889 188 SUPERFAMILY SSF46689 3 85 4.41E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_79410 cbf7a7e7b10f4b35afc91a4185aa8889 188 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 58 5.5E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_79410 cbf7a7e7b10f4b35afc91a4185aa8889 188 Gene3D G3DSA:1.10.357.10 1 188 1.6E-59 T 14-10-2018 AMIS_79410 cbf7a7e7b10f4b35afc91a4185aa8889 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 3.4E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_79410 cbf7a7e7b10f4b35afc91a4185aa8889 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 3.4E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_32920 2fcbf7f571a644e1fe30c5bd96b70c1c 469 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 19 443 6.2E-125 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AMIS_32920 2fcbf7f571a644e1fe30c5bd96b70c1c 469 PIRSF PIRSF006446 13 467 1.5E-117 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AMIS_13420 8b6e2117e230b9626422142336cf0430 255 Pfam PF01925 Sulfite exporter TauE/SafE 10 247 4.8E-38 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AMIS_65150 8ffeaafc6cd44bbf7e027efa969a64e7 119 Gene3D G3DSA:3.40.50.12740 2 118 1.6E-34 T 14-10-2018 AMIS_65150 8ffeaafc6cd44bbf7e027efa969a64e7 119 Pfam PF00072 Response regulator receiver domain 4 108 1.1E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_65150 8ffeaafc6cd44bbf7e027efa969a64e7 119 SMART SM00448 2 108 4.3E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_65150 8ffeaafc6cd44bbf7e027efa969a64e7 119 SUPERFAMILY SSF52172 3 113 9.53E-33 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_72920 bfdaace809b09b1d5b3b04eb034f741b 276 Gene3D G3DSA:3.40.50.1400 1 119 1.7E-21 T 14-10-2018 AMIS_72920 bfdaace809b09b1d5b3b04eb034f741b 276 SUPERFAMILY SSF53800 1 106 7.85E-19 T 14-10-2018 AMIS_72920 bfdaace809b09b1d5b3b04eb034f741b 276 SUPERFAMILY SSF53800 159 268 1.01E-12 T 14-10-2018 AMIS_72920 bfdaace809b09b1d5b3b04eb034f741b 276 Pfam PF01903 CbiX 166 260 1.3E-5 T 14-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 AMIS_72920 bfdaace809b09b1d5b3b04eb034f741b 276 Pfam PF01903 CbiX 6 97 1.5E-10 T 14-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 AMIS_72920 bfdaace809b09b1d5b3b04eb034f741b 276 Gene3D G3DSA:3.40.50.1400 157 270 2.9E-16 T 14-10-2018 AMIS_73050 0ba60dd8009dd7e1beda1413c4ac38c9 230 Gene3D G3DSA:3.90.1680.10 1 223 1.9E-66 T 14-10-2018 IPR036590 SOS response associated peptidase-like AMIS_73050 0ba60dd8009dd7e1beda1413c4ac38c9 230 Pfam PF02586 SOS response associated peptidase (SRAP) 1 213 2.1E-59 T 14-10-2018 IPR003738 SOS response associated peptidase (SRAP) AMIS_73050 0ba60dd8009dd7e1beda1413c4ac38c9 230 SUPERFAMILY SSF143081 2 223 1.57E-64 T 14-10-2018 IPR036590 SOS response associated peptidase-like AMIS_50720 6238a32917de1bd7bfb60907698b3ce6 195 Gene3D G3DSA:3.40.50.360 1 193 7.2E-39 T 14-10-2018 IPR029039 Flavoprotein-like superfamily AMIS_50720 6238a32917de1bd7bfb60907698b3ce6 195 Pfam PF03358 NADPH-dependent FMN reductase 6 144 2.8E-26 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AMIS_50720 6238a32917de1bd7bfb60907698b3ce6 195 SUPERFAMILY SSF52218 6 155 5.37E-31 T 14-10-2018 IPR029039 Flavoprotein-like superfamily AMIS_28570 7ae1f95bed7d50c1828b723749384ae4 189 SUPERFAMILY SSF88659 105 164 1.21E-10 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_28570 7ae1f95bed7d50c1828b723749384ae4 189 Pfam PF08281 Sigma-70, region 4 109 160 3.0E-9 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_28570 7ae1f95bed7d50c1828b723749384ae4 189 Pfam PF04542 Sigma-70 region 2 22 82 8.1E-8 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_28570 7ae1f95bed7d50c1828b723749384ae4 189 SUPERFAMILY SSF88946 8 95 3.92E-16 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_28570 7ae1f95bed7d50c1828b723749384ae4 189 Gene3D G3DSA:1.10.1740.10 4 90 2.6E-11 T 14-10-2018 AMIS_28570 7ae1f95bed7d50c1828b723749384ae4 189 Gene3D G3DSA:1.10.10.10 91 166 1.1E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_28570 7ae1f95bed7d50c1828b723749384ae4 189 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 10 162 5.7E-21 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_56250 c897e75255e0963b63403042dfba9539 128 Gene3D G3DSA:3.40.50.510 1 126 2.0E-41 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 AMIS_56250 c897e75255e0963b63403042dfba9539 128 Pfam PF03610 PTS system fructose IIA component 5 115 1.4E-23 T 14-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AMIS_56250 c897e75255e0963b63403042dfba9539 128 TIGRFAM TIGR02364 dha_pts: dihydroxyacetone kinase, phosphotransfer subunit 4 122 1.1E-34 T 14-10-2018 IPR012844 Dihydroxyacetone kinase phosphotransferase subunit, N-terminal domain AMIS_56250 c897e75255e0963b63403042dfba9539 128 SUPERFAMILY SSF53062 4 123 5.36E-31 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 AMIS_48900 e7273dfa28f1e231e233e45a4fb5f0cd 196 Gene3D G3DSA:1.10.357.10 1 194 4.1E-42 T 14-10-2018 AMIS_48900 e7273dfa28f1e231e233e45a4fb5f0cd 196 SUPERFAMILY SSF46689 3 77 1.05E-20 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_48900 e7273dfa28f1e231e233e45a4fb5f0cd 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 1.3E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_48900 e7273dfa28f1e231e233e45a4fb5f0cd 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 1.3E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_48900 e7273dfa28f1e231e233e45a4fb5f0cd 196 SUPERFAMILY SSF48498 87 189 2.17E-16 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_48900 e7273dfa28f1e231e233e45a4fb5f0cd 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 3.1E-18 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_48900 e7273dfa28f1e231e233e45a4fb5f0cd 196 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 93 192 9.4E-12 T 14-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal AMIS_48900 e7273dfa28f1e231e233e45a4fb5f0cd 196 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 59 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMIS_580 4239f6ba87655b69f528786e1d7b2460 168 Gene3D G3DSA:2.30.110.10 7 131 2.3E-14 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AMIS_580 4239f6ba87655b69f528786e1d7b2460 168 SUPERFAMILY SSF50475 12 134 4.46E-16 T 14-10-2018 AMIS_580 4239f6ba87655b69f528786e1d7b2460 168 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 26 99 1.4E-6 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AMIS_26850 6fcb39cd575d625e5dd5be15aaecfa6b 401 Gene3D G3DSA:3.30.565.10 260 390 4.1E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_26850 6fcb39cd575d625e5dd5be15aaecfa6b 401 Pfam PF07730 Histidine kinase 183 248 1.4E-15 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMIS_26850 6fcb39cd575d625e5dd5be15aaecfa6b 401 SUPERFAMILY SSF55874 297 390 3.72E-11 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_7450 1b706987a7b14e5c2b6c7e4153bf9066 214 SMART SM00860 37 204 2.8E-7 T 14-10-2018 IPR018958 Knr4/Smi1-like domain AMIS_7450 1b706987a7b14e5c2b6c7e4153bf9066 214 SUPERFAMILY SSF160631 28 83 3.66E-9 T 14-10-2018 AMIS_7450 1b706987a7b14e5c2b6c7e4153bf9066 214 Pfam PF09346 SMI1 / KNR4 family (SUKH-1) 37 90 7.9E-7 T 14-10-2018 IPR018958 Knr4/Smi1-like domain AMIS_7450 1b706987a7b14e5c2b6c7e4153bf9066 214 Gene3D G3DSA:3.40.1580.10 30 119 2.9E-5 T 14-10-2018 IPR037883 Knr4/Smi1-like domain superfamily AMIS_16320 fb847cebd6859f749bbbefc17803d3ee 184 Pfam PF01883 Iron-sulfur cluster assembly protein 82 147 2.7E-20 T 14-10-2018 IPR002744 MIP18 family-like AMIS_16320 fb847cebd6859f749bbbefc17803d3ee 184 SUPERFAMILY SSF117916 78 178 1.8E-26 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily AMIS_16320 fb847cebd6859f749bbbefc17803d3ee 184 Gene3D G3DSA:3.30.300.130 73 179 4.1E-31 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily AMIS_69770 961d17a356b356c7568619d367d35f39 451 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 254 265 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AMIS_69770 961d17a356b356c7568619d367d35f39 451 Gene3D G3DSA:3.40.605.10 2 445 2.0E-163 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AMIS_69770 961d17a356b356c7568619d367d35f39 451 Gene3D G3DSA:3.40.309.10 233 417 2.0E-163 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AMIS_69770 961d17a356b356c7568619d367d35f39 451 Pfam PF00171 Aldehyde dehydrogenase family 3 445 2.5E-156 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AMIS_69770 961d17a356b356c7568619d367d35f39 451 SUPERFAMILY SSF53720 3 446 1.44E-151 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMIS_55760 58f8f6395350d77bed50a453c00f373c 2001 Gene3D G3DSA:3.40.50.300 1259 1430 2.1E-14 T 14-10-2018 AMIS_55760 58f8f6395350d77bed50a453c00f373c 2001 Gene3D G3DSA:3.40.960.10 1443 1549 7.3E-11 T 14-10-2018 AMIS_55760 58f8f6395350d77bed50a453c00f373c 2001 SUPERFAMILY SSF52980 1444 1549 3.27E-12 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AMIS_55760 58f8f6395350d77bed50a453c00f373c 2001 SUPERFAMILY SSF52540 282 1404 2.77E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_55760 58f8f6395350d77bed50a453c00f373c 2001 Gene3D G3DSA:3.40.50.300 220 465 3.3E-16 T 14-10-2018 AMIS_55760 58f8f6395350d77bed50a453c00f373c 2001 Gene3D G3DSA:3.40.50.300 1108 1228 1.4E-7 T 14-10-2018 AMIS_55760 58f8f6395350d77bed50a453c00f373c 2001 Pfam PF13245 AAA domain 288 380 5.6E-7 T 14-10-2018 AMIS_55760 58f8f6395350d77bed50a453c00f373c 2001 Pfam PF11784 Protein of unknown function (DUF3320) 1814 1856 7.5E-7 T 14-10-2018 IPR021754 Protein of unknown function DUF3320 AMIS_55760 58f8f6395350d77bed50a453c00f373c 2001 Pfam PF13195 Protein of unknown function (DUF4011) 28 175 1.1E-20 T 14-10-2018 IPR025103 Protein of unknown function DUF4011 AMIS_39640 4d8f249ec1ba33b403c20856070ad532 278 Gene3D G3DSA:1.10.3720.10 75 268 7.2E-22 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_39640 4d8f249ec1ba33b403c20856070ad532 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 269 8.2E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_39640 4d8f249ec1ba33b403c20856070ad532 278 SUPERFAMILY SSF161098 77 259 5.49E-29 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_2980 3279880a53d6ac94959cfed3c2539bfa 394 Pfam PF07690 Major Facilitator Superfamily 29 203 2.8E-20 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_2980 3279880a53d6ac94959cfed3c2539bfa 394 Pfam PF07690 Major Facilitator Superfamily 217 380 7.9E-9 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_2980 3279880a53d6ac94959cfed3c2539bfa 394 SUPERFAMILY SSF103473 15 390 4.58E-45 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_2980 3279880a53d6ac94959cfed3c2539bfa 394 Gene3D G3DSA:1.20.1250.20 208 386 1.9E-13 T 14-10-2018 AMIS_2980 3279880a53d6ac94959cfed3c2539bfa 394 Gene3D G3DSA:1.20.1250.20 13 199 6.8E-23 T 14-10-2018 AMIS_71290 ab9d2be4e8ff60f5a41b647427f81288 337 Gene3D G3DSA:3.40.50.2300 81 316 4.0E-60 T 14-10-2018 AMIS_71290 ab9d2be4e8ff60f5a41b647427f81288 337 Pfam PF13377 Periplasmic binding protein-like domain 175 333 1.1E-31 T 14-10-2018 AMIS_71290 ab9d2be4e8ff60f5a41b647427f81288 337 ProSitePatterns PS00356 LacI-type HTH domain signature. 6 24 - T 14-10-2018 AMIS_71290 ab9d2be4e8ff60f5a41b647427f81288 337 Gene3D G3DSA:3.40.50.2300 167 294 4.0E-60 T 14-10-2018 AMIS_71290 ab9d2be4e8ff60f5a41b647427f81288 337 SUPERFAMILY SSF53822 78 317 8.35E-50 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_71290 ab9d2be4e8ff60f5a41b647427f81288 337 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 50 1.6E-15 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_71290 ab9d2be4e8ff60f5a41b647427f81288 337 Gene3D G3DSA:1.10.260.40 1 60 3.5E-21 T 14-10-2018 AMIS_71290 ab9d2be4e8ff60f5a41b647427f81288 337 SMART SM00354 3 73 2.4E-18 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_71290 ab9d2be4e8ff60f5a41b647427f81288 337 SUPERFAMILY SSF47413 2 59 2.95E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_51840 753f38ba76cd58e4fa579961a5e0a1bd 150 SMART SM00240 67 117 1.6E-15 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 AMIS_51840 753f38ba76cd58e4fa579961a5e0a1bd 150 SUPERFAMILY SSF49879 41 140 4.21E-33 T 14-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 AMIS_51840 753f38ba76cd58e4fa579961a5e0a1bd 150 Pfam PF00498 FHA domain 69 131 9.1E-21 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 AMIS_51840 753f38ba76cd58e4fa579961a5e0a1bd 150 Gene3D G3DSA:2.60.200.20 29 144 2.6E-38 T 14-10-2018 AMIS_75330 5a9798a10f6e2fccb011db5d775fa47b 203 Gene3D G3DSA:3.40.50.10420 13 201 3.3E-34 T 14-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily AMIS_75330 5a9798a10f6e2fccb011db5d775fa47b 203 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 15 195 2.2E-29 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase AMIS_75330 5a9798a10f6e2fccb011db5d775fa47b 203 PIRSF PIRSF006806 12 197 5.1E-27 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase AMIS_75330 5a9798a10f6e2fccb011db5d775fa47b 203 SUPERFAMILY SSF100950 14 199 3.63E-36 T 14-10-2018 IPR037171 NagB/RpiA transferase-like AMIS_75330 5a9798a10f6e2fccb011db5d775fa47b 203 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 15 195 5.5E-32 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase AMIS_73570 ed57c8bf4b2bdf91c1f5195fc3727bc4 199 Pfam PF01810 LysE type translocator 14 198 1.4E-40 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AMIS_54190 24e7964244373703b6e4fa5c86482092 375 Gene3D G3DSA:3.40.50.2000 10 371 3.3E-62 T 14-10-2018 AMIS_54190 24e7964244373703b6e4fa5c86482092 375 Gene3D G3DSA:3.40.50.2000 170 365 3.3E-62 T 14-10-2018 AMIS_54190 24e7964244373703b6e4fa5c86482092 375 Pfam PF13439 Glycosyltransferase Family 4 18 136 8.0E-7 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AMIS_54190 24e7964244373703b6e4fa5c86482092 375 Pfam PF00534 Glycosyl transferases group 1 187 334 4.1E-12 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 AMIS_54190 24e7964244373703b6e4fa5c86482092 375 SUPERFAMILY SSF53756 13 373 2.02E-39 T 14-10-2018 AMIS_62100 4131d2df25991a0f844f185b0c33dd6a 105 Gene3D G3DSA:1.10.8.50 1 105 7.4E-42 T 14-10-2018 AMIS_62100 4131d2df25991a0f844f185b0c33dd6a 105 SUPERFAMILY SSF46946 56 102 1.65E-6 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 AMIS_62100 4131d2df25991a0f844f185b0c33dd6a 105 PIRSF PIRSF002134 36 104 5.9E-6 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMIS_31850 03310325f3ce04d5b02f73c51f432417 166 SUPERFAMILY SSF55729 12 143 2.06E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_31850 03310325f3ce04d5b02f73c51f432417 166 Gene3D G3DSA:3.40.630.30 1 147 2.1E-21 T 14-10-2018 AMIS_31850 03310325f3ce04d5b02f73c51f432417 166 Pfam PF00583 Acetyltransferase (GNAT) family 42 138 1.5E-14 T 14-10-2018 IPR000182 GNAT domain AMIS_30220 26995cbaa2e203578c05952fbd102cdc 385 PIRSF PIRSF004810 1 379 4.2E-82 T 14-10-2018 IPR014047 Chromate transporter, long chain AMIS_30220 26995cbaa2e203578c05952fbd102cdc 385 TIGRFAM TIGR00937 2A51: chromate efflux transporter 18 355 4.2E-64 T 14-10-2018 IPR014047 Chromate transporter, long chain AMIS_30220 26995cbaa2e203578c05952fbd102cdc 385 Pfam PF02417 Chromate transporter 14 179 5.0E-32 T 14-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 AMIS_30220 26995cbaa2e203578c05952fbd102cdc 385 Pfam PF02417 Chromate transporter 213 373 3.9E-34 T 14-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 AMIS_41520 3c6686ced19662116f428e05c89e9ad5 184 SUPERFAMILY SSF46894 115 178 3.3E-5 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_41520 3c6686ced19662116f428e05c89e9ad5 184 Gene3D G3DSA:1.10.10.10 60 184 4.5E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_30930 1be6602cc931c22e31013d5339eceda1 141 Gene3D G3DSA:3.40.50.620 6 141 6.3E-36 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMIS_30930 1be6602cc931c22e31013d5339eceda1 141 SUPERFAMILY SSF52374 10 138 3.75E-27 T 14-10-2018 AMIS_30930 1be6602cc931c22e31013d5339eceda1 141 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 10 139 9.7E-36 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AMIS_30930 1be6602cc931c22e31013d5339eceda1 141 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 26 47 3.1E-20 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AMIS_30930 1be6602cc931c22e31013d5339eceda1 141 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 92 108 3.1E-20 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AMIS_30930 1be6602cc931c22e31013d5339eceda1 141 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 8 26 3.1E-20 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AMIS_30930 1be6602cc931c22e31013d5339eceda1 141 Pfam PF01467 Cytidylyltransferase-like 11 137 6.0E-12 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AMIS_30930 1be6602cc931c22e31013d5339eceda1 141 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 10 61 2.0E-15 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AMIS_9380 65841788e8ab604bf142cb965e093868 428 PIRSF PIRSF000484 2 423 1.6E-99 T 14-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 AMIS_9380 65841788e8ab604bf142cb965e093868 428 Gene3D G3DSA:3.20.20.70 149 308 2.8E-105 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_9380 65841788e8ab604bf142cb965e093868 428 SUPERFAMILY SSF54675 5 135 8.24E-41 T 14-10-2018 AMIS_9380 65841788e8ab604bf142cb965e093868 428 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 137 307 1.9E-5 T 14-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 AMIS_9380 65841788e8ab604bf142cb965e093868 428 Gene3D G3DSA:3.20.140.10 8 371 2.8E-105 T 14-10-2018 AMIS_9380 65841788e8ab604bf142cb965e093868 428 TIGRFAM TIGR01513 NAPRTase_put: nicotinate phosphoribosyltransferase 7 380 6.3E-131 T 14-10-2018 IPR006405 Nicotinate phosphoribosyltransferase pncB-type GO:0004516|GO:0019358 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264|Reactome: R-HSA-6798695 AMIS_9380 65841788e8ab604bf142cb965e093868 428 SUPERFAMILY SSF51690 137 421 4.71E-79 T 14-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AMIS_34500 6fc1b88009a91d46346a301d34d17136 283 SUPERFAMILY SSF53474 29 268 1.79E-45 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_34500 6fc1b88009a91d46346a301d34d17136 283 Gene3D G3DSA:3.40.50.1820 20 283 2.0E-78 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_34500 6fc1b88009a91d46346a301d34d17136 283 Pfam PF01738 Dienelactone hydrolase family 122 232 3.0E-5 T 14-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 AMIS_1160 9fdd04ddd9351a685fc04b9b758363d8 225 Gene3D G3DSA:2.40.10.10 32 98 4.1E-14 T 14-10-2018 AMIS_1160 9fdd04ddd9351a685fc04b9b758363d8 225 Pfam PF00089 Trypsin 39 213 3.0E-26 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 AMIS_1160 9fdd04ddd9351a685fc04b9b758363d8 225 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 56 71 9.3E-10 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AMIS_1160 9fdd04ddd9351a685fc04b9b758363d8 225 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 177 189 9.3E-10 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AMIS_1160 9fdd04ddd9351a685fc04b9b758363d8 225 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 98 112 9.3E-10 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AMIS_1160 9fdd04ddd9351a685fc04b9b758363d8 225 Gene3D G3DSA:2.40.10.10 99 223 6.8E-15 T 14-10-2018 AMIS_1160 9fdd04ddd9351a685fc04b9b758363d8 225 SMART SM00020 31 219 2.6E-10 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 AMIS_1160 9fdd04ddd9351a685fc04b9b758363d8 225 SUPERFAMILY SSF50494 13 223 2.57E-37 T 14-10-2018 IPR009003 Peptidase S1, PA clan AMIS_79450 57ca18a114b163f83fa9069f2b67308b 219 Gene3D G3DSA:1.10.10.10 120 218 9.1E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_79450 57ca18a114b163f83fa9069f2b67308b 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 217 2.0E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_79450 57ca18a114b163f83fa9069f2b67308b 219 SMART SM00448 1 112 1.3E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_79450 57ca18a114b163f83fa9069f2b67308b 219 SUPERFAMILY SSF52172 2 170 4.53E-34 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_79450 57ca18a114b163f83fa9069f2b67308b 219 Pfam PF00072 Response regulator receiver domain 3 113 1.5E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_79450 57ca18a114b163f83fa9069f2b67308b 219 SMART SM00862 145 217 5.8E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_79450 57ca18a114b163f83fa9069f2b67308b 219 Gene3D G3DSA:3.40.50.2300 1 119 2.8E-28 T 14-10-2018 AMIS_25510 e988b533cff59905d47d04145165d74c 334 Pfam PF13280 WYL domain 142 316 1.5E-21 T 14-10-2018 IPR026881 WYL domain AMIS_25510 e988b533cff59905d47d04145165d74c 334 ProSitePatterns PS00894 DeoR-type HTH domain signature. 7 41 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AMIS_25510 e988b533cff59905d47d04145165d74c 334 Pfam PF08279 HTH domain 7 62 1.3E-13 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 AMIS_25510 e988b533cff59905d47d04145165d74c 334 Gene3D G3DSA:1.10.10.10 4 65 7.6E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_25510 e988b533cff59905d47d04145165d74c 334 SUPERFAMILY SSF46785 5 63 1.87E-9 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_37830 7f0f2486200e369a2cc724cf3c20ea24 329 SUPERFAMILY SSF53067 2 125 4.66E-23 T 14-10-2018 AMIS_37830 7f0f2486200e369a2cc724cf3c20ea24 329 Pfam PF02541 Ppx/GppA phosphatase family 24 305 9.0E-58 T 14-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 AMIS_37830 7f0f2486200e369a2cc724cf3c20ea24 329 Gene3D G3DSA:3.30.420.40 4 300 8.0E-69 T 14-10-2018 AMIS_37830 7f0f2486200e369a2cc724cf3c20ea24 329 Gene3D G3DSA:3.30.420.150 108 293 8.0E-69 T 14-10-2018 AMIS_37830 7f0f2486200e369a2cc724cf3c20ea24 329 SUPERFAMILY SSF53067 129 306 1.23E-31 T 14-10-2018 AMIS_52430 8ef1aea15bae2c5fbfebd1b2e5493989 489 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 294 455 2.0E-36 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_52430 8ef1aea15bae2c5fbfebd1b2e5493989 489 SMART SM00283 227 488 5.5E-54 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_52430 8ef1aea15bae2c5fbfebd1b2e5493989 489 Gene3D G3DSA:1.10.287.950 205 488 2.9E-55 T 14-10-2018 AMIS_52430 8ef1aea15bae2c5fbfebd1b2e5493989 489 SUPERFAMILY SSF58104 210 486 1.03E-54 T 14-10-2018 AMIS_23540 152ee81b067632efa52e16493f8e191d 303 Gene3D G3DSA:3.40.50.1820 17 303 2.8E-48 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_23540 152ee81b067632efa52e16493f8e191d 303 PRINTS PR00111 Alpha/beta hydrolase fold signature 109 122 1.0E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_23540 152ee81b067632efa52e16493f8e191d 303 PRINTS PR00111 Alpha/beta hydrolase fold signature 66 81 1.0E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_23540 152ee81b067632efa52e16493f8e191d 303 PRINTS PR00111 Alpha/beta hydrolase fold signature 123 136 1.0E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_23540 152ee81b067632efa52e16493f8e191d 303 SUPERFAMILY SSF53474 22 301 6.77E-41 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_23540 152ee81b067632efa52e16493f8e191d 303 Pfam PF00561 alpha/beta hydrolase fold 41 291 4.6E-19 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_35990 08f92ff8bbd9e5dc676647c7625af3be 370 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 213 226 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 AMIS_35990 08f92ff8bbd9e5dc676647c7625af3be 370 SUPERFAMILY SSF53383 8 368 1.07E-105 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_35990 08f92ff8bbd9e5dc676647c7625af3be 370 Pfam PF00155 Aminotransferase class I and II 16 355 3.8E-62 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMIS_35990 08f92ff8bbd9e5dc676647c7625af3be 370 Gene3D G3DSA:3.40.640.10 1 369 1.8E-122 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_58590 36072c57b9a40e1326677dc10bd918b6 323 SMART SM00710 222 244 51.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMIS_58590 36072c57b9a40e1326677dc10bd918b6 323 SMART SM00710 245 266 6000.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMIS_58590 36072c57b9a40e1326677dc10bd918b6 323 SMART SM00710 119 141 91.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMIS_58590 36072c57b9a40e1326677dc10bd918b6 323 SMART SM00710 143 165 20.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat AMIS_58590 36072c57b9a40e1326677dc10bd918b6 323 Pfam PF00544 Pectate lyase 93 255 2.9E-38 T 14-10-2018 IPR002022 Pectate lyase AMIS_58590 36072c57b9a40e1326677dc10bd918b6 323 Gene3D G3DSA:2.160.20.10 39 323 2.4E-96 T 14-10-2018 IPR012334 Pectin lyase fold AMIS_58590 36072c57b9a40e1326677dc10bd918b6 323 SUPERFAMILY SSF51126 41 321 5.34E-78 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor AMIS_58590 36072c57b9a40e1326677dc10bd918b6 323 SMART SM00656 56 261 4.4E-44 T 14-10-2018 IPR002022 Pectate lyase AMIS_22960 8d73ba673c89003a4718a4634a21abca 310 Gene3D G3DSA:3.40.50.300 1 263 1.7E-39 T 14-10-2018 AMIS_22960 8d73ba673c89003a4718a4634a21abca 310 SUPERFAMILY SSF52540 1 250 6.66E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_22960 8d73ba673c89003a4718a4634a21abca 310 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 216 1.8E-9 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AMIS_2290 393aa0d0eaf09e697183ae5806dbc355 420 Pfam PF13560 Helix-turn-helix domain 47 104 1.3E-9 T 14-10-2018 AMIS_2290 393aa0d0eaf09e697183ae5806dbc355 420 Gene3D G3DSA:1.25.40.10 125 402 2.3E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_2290 393aa0d0eaf09e697183ae5806dbc355 420 Gene3D G3DSA:1.10.260.40 43 111 1.6E-13 T 14-10-2018 AMIS_2290 393aa0d0eaf09e697183ae5806dbc355 420 SMART SM00530 50 107 1.6E-10 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMIS_2290 393aa0d0eaf09e697183ae5806dbc355 420 SUPERFAMILY SSF47413 44 110 3.66E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_23870 54f316daaa5f8a6d6fc6492533d71ed2 523 Pfam PF00544 Pectate lyase 106 278 2.1E-34 T 14-10-2018 IPR002022 Pectate lyase AMIS_23870 54f316daaa5f8a6d6fc6492533d71ed2 523 SMART SM00656 72 284 7.8E-19 T 14-10-2018 IPR002022 Pectate lyase AMIS_23870 54f316daaa5f8a6d6fc6492533d71ed2 523 SUPERFAMILY SSF51126 32 355 1.82E-72 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor AMIS_23870 54f316daaa5f8a6d6fc6492533d71ed2 523 Gene3D G3DSA:2.160.20.10 32 355 8.3E-97 T 14-10-2018 IPR012334 Pectin lyase fold AMIS_23870 54f316daaa5f8a6d6fc6492533d71ed2 523 SUPERFAMILY SSF49785 403 519 1.98E-7 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_23870 54f316daaa5f8a6d6fc6492533d71ed2 523 Gene3D G3DSA:2.60.120.260 413 522 9.4E-13 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_64770 10b6374cb01638014a152b7cdf97c88f 360 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 181 310 1.8E-10 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMIS_64770 10b6374cb01638014a152b7cdf97c88f 360 SUPERFAMILY SSF52540 178 315 2.2E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_64770 10b6374cb01638014a152b7cdf97c88f 360 Gene3D G3DSA:3.40.50.300 160 310 9.4E-15 T 14-10-2018 AMIS_64770 10b6374cb01638014a152b7cdf97c88f 360 SMART SM00382 177 313 2.5E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_21540 83e3b783f179839810ca4696cf48466f 233 Gene3D G3DSA:1.10.260.40 151 215 4.7E-15 T 14-10-2018 AMIS_21540 83e3b783f179839810ca4696cf48466f 233 SUPERFAMILY SSF47413 155 215 2.33E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_21540 83e3b783f179839810ca4696cf48466f 233 Pfam PF13560 Helix-turn-helix domain 156 212 1.5E-14 T 14-10-2018 AMIS_21540 83e3b783f179839810ca4696cf48466f 233 SMART SM00530 160 216 4.2E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMIS_16730 a9e94c0a1526df2412de474f6b9752f1 162 PRINTS PR00502 NUDIX hydrolase family signature 49 63 1.4E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AMIS_16730 a9e94c0a1526df2412de474f6b9752f1 162 PRINTS PR00502 NUDIX hydrolase family signature 63 78 1.4E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AMIS_16730 a9e94c0a1526df2412de474f6b9752f1 162 SUPERFAMILY SSF55811 22 145 7.72E-30 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMIS_16730 a9e94c0a1526df2412de474f6b9752f1 162 Pfam PF00293 NUDIX domain 25 136 1.0E-21 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMIS_16730 a9e94c0a1526df2412de474f6b9752f1 162 Gene3D G3DSA:3.90.79.10 5 147 2.3E-30 T 14-10-2018 AMIS_28130 cc489ac517c15eceebad6958869fe310 332 Pfam PF13377 Periplasmic binding protein-like domain 171 330 2.0E-29 T 14-10-2018 AMIS_28130 cc489ac517c15eceebad6958869fe310 332 SUPERFAMILY SSF53822 64 331 7.97E-52 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_28130 cc489ac517c15eceebad6958869fe310 332 Gene3D G3DSA:1.10.260.40 1 58 3.6E-21 T 14-10-2018 AMIS_28130 cc489ac517c15eceebad6958869fe310 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 2.5E-12 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_28130 cc489ac517c15eceebad6958869fe310 332 SUPERFAMILY SSF47413 4 62 1.69E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_28130 cc489ac517c15eceebad6958869fe310 332 SMART SM00354 4 74 4.0E-20 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_28130 cc489ac517c15eceebad6958869fe310 332 Gene3D G3DSA:3.40.50.2300 59 308 8.3E-57 T 14-10-2018 AMIS_28130 cc489ac517c15eceebad6958869fe310 332 Gene3D G3DSA:3.40.50.2300 162 291 8.3E-57 T 14-10-2018 AMIS_67310 f5d8ba490cd23fcbd722488b2d56da94 503 SUPERFAMILY SSF53448 58 310 1.03E-28 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_67310 f5d8ba490cd23fcbd722488b2d56da94 503 Gene3D G3DSA:3.90.550.10 43 290 2.5E-25 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_67310 f5d8ba490cd23fcbd722488b2d56da94 503 Pfam PF00535 Glycosyl transferase family 2 62 242 1.1E-15 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AMIS_38300 6c0c68ac4485b62ec8abdfaf65e5bc44 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 127 147 4.3E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_38300 6c0c68ac4485b62ec8abdfaf65e5bc44 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 78 93 4.3E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_38300 6c0c68ac4485b62ec8abdfaf65e5bc44 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 97 113 4.3E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_38300 6c0c68ac4485b62ec8abdfaf65e5bc44 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 61 77 4.3E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_38300 6c0c68ac4485b62ec8abdfaf65e5bc44 161 Gene3D G3DSA:1.10.10.10 2 151 2.4E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_38300 6c0c68ac4485b62ec8abdfaf65e5bc44 161 Pfam PF01047 MarR family 57 102 3.1E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_38300 6c0c68ac4485b62ec8abdfaf65e5bc44 161 SUPERFAMILY SSF46785 12 150 3.75E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_38300 6c0c68ac4485b62ec8abdfaf65e5bc44 161 SMART SM00347 33 137 2.5E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_14910 e6db3aa017e659cd9936220e3398bd1a 356 Gene3D G3DSA:3.90.550.10 27 243 3.1E-24 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_14910 e6db3aa017e659cd9936220e3398bd1a 356 Pfam PF13641 Glycosyltransferase like family 2 36 242 3.6E-15 T 14-10-2018 AMIS_14910 e6db3aa017e659cd9936220e3398bd1a 356 SUPERFAMILY SSF53448 37 282 1.74E-30 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_32780 d955732a14e87fe6b5103c433611c405 412 SUPERFAMILY SSF50974 105 401 4.97E-37 T 14-10-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 AMIS_32780 d955732a14e87fe6b5103c433611c405 412 Pfam PF13360 PQQ-like domain 123 231 6.9E-6 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat AMIS_32780 d955732a14e87fe6b5103c433611c405 412 Gene3D G3DSA:2.130.10.10 313 404 1.0E-11 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_32780 d955732a14e87fe6b5103c433611c405 412 Gene3D G3DSA:2.130.10.10 102 312 2.9E-19 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_66120 e5320d5bc277534222c065c96a586897 563 Gene3D G3DSA:3.40.720.10 245 528 5.5E-18 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AMIS_66120 e5320d5bc277534222c065c96a586897 563 SUPERFAMILY SSF53649 253 518 1.4E-8 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AMIS_28480 472ec9660822d5e0887bf1bdf8ff7d73 239 Pfam PF10099 Anti-sigma-K factor rskA 59 235 9.5E-27 T 14-10-2018 IPR018764 Anti-sigma K factor RskA GO:0005886|GO:0016021 AMIS_14320 93cb48bcaa3b14163607b098264d0c39 414 Gene3D G3DSA:3.30.2010.10 199 280 9.8E-26 T 14-10-2018 AMIS_14320 93cb48bcaa3b14163607b098264d0c39 414 Pfam PF01435 Peptidase family M48 205 408 2.2E-28 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AMIS_14320 93cb48bcaa3b14163607b098264d0c39 414 Pfam PF16491 CAAX prenyl protease N-terminal, five membrane helices 78 200 4.8E-16 T 14-10-2018 IPR032456 CAAX prenyl protease 1, N-terminal KEGG: 00900+3.4.24.84 AMIS_33820 f74ca6a1efc60f4244d156bbd88542d3 133 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 24 117 9.1E-9 T 14-10-2018 AMIS_33820 f74ca6a1efc60f4244d156bbd88542d3 133 Gene3D G3DSA:3.10.180.10 4 130 5.9E-21 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_33820 f74ca6a1efc60f4244d156bbd88542d3 133 SUPERFAMILY SSF54593 10 131 2.82E-13 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_16880 361f1169601fe93810a305e317971927 120 Gene3D G3DSA:2.60.120.10 23 111 2.5E-8 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMIS_16880 361f1169601fe93810a305e317971927 120 SUPERFAMILY SSF51182 28 116 3.3E-8 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily AMIS_43720 651e829ed35b7d5e026912326a02f50d 881 SUPERFAMILY SSF49785 737 878 7.48E-5 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_43720 651e829ed35b7d5e026912326a02f50d 881 Pfam PF17132 alpha-L-rhamnosidase 187 669 2.2E-28 T 14-10-2018 IPR033400 Alpha-L-rhamnosidase RhaM AMIS_28790 f5a9e0c20cf7a6e744a27b5bd734b643 402 Gene3D G3DSA:2.160.20.10 187 402 6.0E-68 T 14-10-2018 IPR012334 Pectin lyase fold AMIS_28790 f5a9e0c20cf7a6e744a27b5bd734b643 402 SUPERFAMILY SSF51126 193 362 2.89E-48 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor AMIS_28790 f5a9e0c20cf7a6e744a27b5bd734b643 402 SUPERFAMILY SSF49785 36 152 3.49E-6 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_28790 f5a9e0c20cf7a6e744a27b5bd734b643 402 Gene3D G3DSA:2.60.120.260 43 153 3.9E-13 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_28790 f5a9e0c20cf7a6e744a27b5bd734b643 402 Pfam PF03211 Pectate lyase 181 377 1.7E-76 T 14-10-2018 IPR004898 Pectate lyase PlyH/PlyE-like GO:0005576|GO:0030570 KEGG: 00040+4.2.2.2 AMIS_21720 8e032e9be3bbc3f31ec7d624584171f0 502 Pfam PF00171 Aldehyde dehydrogenase family 32 493 6.1E-156 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AMIS_21720 8e032e9be3bbc3f31ec7d624584171f0 502 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 266 273 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AMIS_21720 8e032e9be3bbc3f31ec7d624584171f0 502 Gene3D G3DSA:3.40.605.10 21 491 5.7E-167 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AMIS_21720 8e032e9be3bbc3f31ec7d624584171f0 502 Gene3D G3DSA:3.40.309.10 271 463 5.7E-167 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AMIS_21720 8e032e9be3bbc3f31ec7d624584171f0 502 SUPERFAMILY SSF53720 16 495 4.06E-153 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMIS_66670 fdf534f103ef920c1de59a452e211791 221 SUPERFAMILY SSF48498 94 219 6.68E-34 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_66670 fdf534f103ef920c1de59a452e211791 221 Gene3D G3DSA:1.10.357.10 24 221 7.6E-64 T 14-10-2018 AMIS_66670 fdf534f103ef920c1de59a452e211791 221 Pfam PF00440 Bacterial regulatory proteins, tetR family 28 74 4.1E-14 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_66670 fdf534f103ef920c1de59a452e211791 221 SUPERFAMILY SSF46689 16 98 3.9E-21 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_66670 fdf534f103ef920c1de59a452e211791 221 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 41 6.1E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_66670 fdf534f103ef920c1de59a452e211791 221 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 49 72 6.1E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_64030 97be52bb15d642639075dba6afb37c1e 368 Pfam PF00892 EamA-like transporter family 37 175 2.8E-8 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMIS_64030 97be52bb15d642639075dba6afb37c1e 368 Pfam PF00892 EamA-like transporter family 189 321 1.0E-21 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMIS_64030 97be52bb15d642639075dba6afb37c1e 368 SUPERFAMILY SSF103481 225 323 1.96E-12 T 14-10-2018 AMIS_64030 97be52bb15d642639075dba6afb37c1e 368 SUPERFAMILY SSF103481 68 177 5.62E-6 T 14-10-2018 AMIS_32140 e532b67e1f5cab7b5fe0f5a2b0b51c64 409 Pfam PF07690 Major Facilitator Superfamily 24 350 3.4E-16 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_32140 e532b67e1f5cab7b5fe0f5a2b0b51c64 409 Gene3D G3DSA:1.20.1250.20 229 406 3.0E-13 T 14-10-2018 AMIS_32140 e532b67e1f5cab7b5fe0f5a2b0b51c64 409 Gene3D G3DSA:1.20.1250.20 8 206 1.7E-12 T 14-10-2018 AMIS_32140 e532b67e1f5cab7b5fe0f5a2b0b51c64 409 SUPERFAMILY SSF103473 15 405 2.62E-32 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_45640 1a83ff445206240cc5943a10036508b3 368 Gene3D G3DSA:3.40.640.10 56 262 3.6E-98 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_45640 1a83ff445206240cc5943a10036508b3 368 Pfam PF00155 Aminotransferase class I and II 94 357 3.0E-24 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMIS_45640 1a83ff445206240cc5943a10036508b3 368 Gene3D G3DSA:3.90.1150.10 18 357 3.6E-98 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMIS_45640 1a83ff445206240cc5943a10036508b3 368 SUPERFAMILY SSF53383 23 362 3.34E-70 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_10460 a207a92df81eaa30234095cb9f41a26a 247 Pfam PF00149 Calcineurin-like phosphoesterase 2 77 6.0E-10 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AMIS_10460 a207a92df81eaa30234095cb9f41a26a 247 PIRSF PIRSF008292 1 235 4.6E-88 T 14-10-2018 IPR016538 Uncharacterised conserved protein UCP008292 AMIS_10460 a207a92df81eaa30234095cb9f41a26a 247 Gene3D G3DSA:3.60.21.10 1 238 5.6E-14 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like AMIS_10460 a207a92df81eaa30234095cb9f41a26a 247 SUPERFAMILY SSF56300 2 224 3.1E-29 T 14-10-2018 AMIS_12060 8c6f8decaaf34408be98075e6ac3258a 309 PRINTS PR00690 Adhesin family signature 58 71 1.2E-7 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 AMIS_12060 8c6f8decaaf34408be98075e6ac3258a 309 PRINTS PR00690 Adhesin family signature 248 266 1.2E-7 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 AMIS_12060 8c6f8decaaf34408be98075e6ac3258a 309 PRINTS PR00690 Adhesin family signature 27 45 1.2E-7 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 AMIS_12060 8c6f8decaaf34408be98075e6ac3258a 309 PRINTS PR00690 Adhesin family signature 195 216 1.2E-7 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 AMIS_12060 8c6f8decaaf34408be98075e6ac3258a 309 Gene3D G3DSA:3.40.50.1980 198 309 3.1E-40 T 14-10-2018 AMIS_12060 8c6f8decaaf34408be98075e6ac3258a 309 Gene3D G3DSA:3.40.50.1980 27 197 3.7E-42 T 14-10-2018 AMIS_12060 8c6f8decaaf34408be98075e6ac3258a 309 SUPERFAMILY SSF53807 23 306 1.57E-72 T 14-10-2018 AMIS_12060 8c6f8decaaf34408be98075e6ac3258a 309 Pfam PF01297 Zinc-uptake complex component A periplasmic 30 304 2.6E-70 T 14-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 AMIS_12060 8c6f8decaaf34408be98075e6ac3258a 309 PRINTS PR00691 Adhesin B signature 27 48 1.9E-6 T 14-10-2018 IPR006129 Adhesin B GO:0007155 AMIS_12060 8c6f8decaaf34408be98075e6ac3258a 309 PRINTS PR00691 Adhesin B signature 195 212 1.9E-6 T 14-10-2018 IPR006129 Adhesin B GO:0007155 AMIS_12060 8c6f8decaaf34408be98075e6ac3258a 309 PRINTS PR00691 Adhesin B signature 284 302 1.9E-6 T 14-10-2018 IPR006129 Adhesin B GO:0007155 AMIS_12060 8c6f8decaaf34408be98075e6ac3258a 309 PRINTS PR00691 Adhesin B signature 139 158 1.9E-6 T 14-10-2018 IPR006129 Adhesin B GO:0007155 AMIS_63560 8f3be50a4ee773ae54a8b20e4a1d17af 544 Pfam PF05552 Conserved TM helix 10 56 3.6E-11 T 14-10-2018 IPR008910 Conserved TM helix AMIS_71310 535fb56cc8c7960ea25ee34ffa2a87bb 128 Pfam PF10756 Bacterial PH domain 53 117 1.2E-7 T 14-10-2018 IPR019692 Protein of unknown function DUF2581 AMIS_41690 0fc86056a5d97767edea82ac0a27f6de 144 SMART SM00347 28 131 1.5E-16 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_41690 0fc86056a5d97767edea82ac0a27f6de 144 SUPERFAMILY SSF46785 5 138 3.71E-32 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_41690 0fc86056a5d97767edea82ac0a27f6de 144 Pfam PF01047 MarR family 35 93 1.1E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_41690 0fc86056a5d97767edea82ac0a27f6de 144 Gene3D G3DSA:1.10.10.10 2 138 1.9E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_52780 4db0efdace67906f2bc069f75bea3204 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 78 281 1.2E-7 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_52780 4db0efdace67906f2bc069f75bea3204 286 Gene3D G3DSA:1.10.3720.10 8 282 4.1E-31 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_52780 4db0efdace67906f2bc069f75bea3204 286 SUPERFAMILY SSF161098 13 276 1.57E-32 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_23640 1091f7436b84bb2f05f5f6ae9eecbf9c 449 SUPERFAMILY SSF51971 4 317 5.47E-60 T 14-10-2018 AMIS_23640 1091f7436b84bb2f05f5f6ae9eecbf9c 449 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 178 1.8E-14 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMIS_23640 1091f7436b84bb2f05f5f6ae9eecbf9c 449 Gene3D G3DSA:3.50.50.60 48 322 2.5E-146 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_23640 1091f7436b84bb2f05f5f6ae9eecbf9c 449 PRINTS PR00419 Adrenodoxin reductase family signature 6 28 1.1E-21 T 14-10-2018 AMIS_23640 1091f7436b84bb2f05f5f6ae9eecbf9c 449 PRINTS PR00419 Adrenodoxin reductase family signature 74 84 1.1E-21 T 14-10-2018 AMIS_23640 1091f7436b84bb2f05f5f6ae9eecbf9c 449 PRINTS PR00419 Adrenodoxin reductase family signature 31 44 1.1E-21 T 14-10-2018 AMIS_23640 1091f7436b84bb2f05f5f6ae9eecbf9c 449 PRINTS PR00419 Adrenodoxin reductase family signature 145 159 1.1E-21 T 14-10-2018 AMIS_23640 1091f7436b84bb2f05f5f6ae9eecbf9c 449 PIRSF PIRSF000362 1 448 9.7E-161 T 14-10-2018 IPR021163 Ferredoxin-NADP+ reductase, adrenodoxin-type GO:0016491|GO:0055114 Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AMIS_23640 1091f7436b84bb2f05f5f6ae9eecbf9c 449 Gene3D G3DSA:3.40.50.720 7 442 2.5E-146 T 14-10-2018 AMIS_27760 f2d1052791e2b0f4170af6d5d8430618 153 Pfam PF04248 Domain of unknown function (DUF427) 20 111 8.1E-32 T 14-10-2018 IPR007361 Domain of unknown function DUF427 AMIS_27760 f2d1052791e2b0f4170af6d5d8430618 153 Gene3D G3DSA:2.170.150.40 4 117 2.1E-34 T 14-10-2018 AMIS_67230 68ced9e575a6d900e6d7047a186cfcbf 472 Pfam PF00589 Phage integrase family 246 432 2.4E-17 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMIS_67230 68ced9e575a6d900e6d7047a186cfcbf 472 Gene3D G3DSA:1.10.443.10 242 446 8.9E-33 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AMIS_67230 68ced9e575a6d900e6d7047a186cfcbf 472 Gene3D G3DSA:1.10.150.130 81 199 9.8E-13 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal AMIS_67230 68ced9e575a6d900e6d7047a186cfcbf 472 SUPERFAMILY SSF56349 85 438 4.12E-37 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMIS_71100 229d284f1bf0fb91fa246fe767d5791d 442 SUPERFAMILY SSF63411 38 226 5.02E-26 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMIS_71100 229d284f1bf0fb91fa246fe767d5791d 442 Gene3D G3DSA:3.30.830.10 26 225 7.6E-27 T 14-10-2018 AMIS_71100 229d284f1bf0fb91fa246fe767d5791d 442 Pfam PF05193 Peptidase M16 inactive domain 181 354 2.0E-16 T 14-10-2018 IPR007863 Peptidase M16, C-terminal AMIS_71100 229d284f1bf0fb91fa246fe767d5791d 442 SUPERFAMILY SSF63411 242 438 1.48E-36 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMIS_71100 229d284f1bf0fb91fa246fe767d5791d 442 Pfam PF00675 Insulinase (Peptidase family M16) 27 145 5.5E-6 T 14-10-2018 IPR011765 Peptidase M16, N-terminal AMIS_71100 229d284f1bf0fb91fa246fe767d5791d 442 Gene3D G3DSA:3.30.830.10 233 431 5.7E-43 T 14-10-2018 AMIS_18340 c5fa2516b049c840677694bb8eb24eaf 102 Pfam PF11829 Protein of unknown function (DUF3349) 7 97 6.0E-33 T 14-10-2018 IPR021784 Protein of unknown function DUF3349 AMIS_18340 c5fa2516b049c840677694bb8eb24eaf 102 Gene3D G3DSA:1.10.150.430 2 102 7.9E-34 T 14-10-2018 AMIS_4490 e43e17e1b7b213e79d82671f87ff9e9b 528 SUPERFAMILY SSF53474 87 453 1.16E-23 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_4490 e43e17e1b7b213e79d82671f87ff9e9b 528 Pfam PF00561 alpha/beta hydrolase fold 89 461 1.0E-25 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_43160 f61e6fe80123897249188bb5e57d1997 431 Gene3D G3DSA:3.40.190.10 67 383 1.9E-64 T 14-10-2018 AMIS_43160 f61e6fe80123897249188bb5e57d1997 431 Pfam PF13416 Bacterial extracellular solute-binding protein 65 368 6.8E-25 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein AMIS_43160 f61e6fe80123897249188bb5e57d1997 431 SUPERFAMILY SSF53850 48 407 5.44E-55 T 14-10-2018 AMIS_43160 f61e6fe80123897249188bb5e57d1997 431 Gene3D G3DSA:3.40.190.10 160 421 1.9E-64 T 14-10-2018 AMIS_41810 2ca0cf4bde529eda76f0d26ed6cd1c61 174 Gene3D G3DSA:3.30.428.10 31 170 3.8E-25 T 14-10-2018 IPR036265 HIT-like superfamily AMIS_41810 2ca0cf4bde529eda76f0d26ed6cd1c61 174 SUPERFAMILY SSF54197 33 150 6.59E-20 T 14-10-2018 IPR036265 HIT-like superfamily AMIS_3740 05763fdc7cb19b1e2993642f809780d9 449 Pfam PF07690 Major Facilitator Superfamily 308 440 9.1E-13 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_3740 05763fdc7cb19b1e2993642f809780d9 449 Pfam PF07690 Major Facilitator Superfamily 48 302 5.1E-18 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_3740 05763fdc7cb19b1e2993642f809780d9 449 Gene3D G3DSA:1.20.1250.20 3 231 1.7E-20 T 14-10-2018 AMIS_3740 05763fdc7cb19b1e2993642f809780d9 449 SUPERFAMILY SSF103473 8 446 1.1E-43 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_3740 05763fdc7cb19b1e2993642f809780d9 449 Gene3D G3DSA:1.20.1250.20 263 449 2.0E-21 T 14-10-2018 AMIS_48630 0350c0964603dcde7ca2daf8dfd95c54 200 Pfam PF00583 Acetyltransferase (GNAT) family 104 176 1.4E-9 T 14-10-2018 IPR000182 GNAT domain AMIS_48630 0350c0964603dcde7ca2daf8dfd95c54 200 Gene3D G3DSA:3.40.630.30 3 200 2.2E-42 T 14-10-2018 AMIS_48630 0350c0964603dcde7ca2daf8dfd95c54 200 SUPERFAMILY SSF55729 1 198 4.15E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_38280 bce986e222e351565c69ecc663e384d9 383 Gene3D G3DSA:3.20.20.30 1 357 7.1E-127 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_38280 bce986e222e351565c69ecc663e384d9 383 Pfam PF00296 Luciferase-like monooxygenase 3 329 6.7E-81 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMIS_38280 bce986e222e351565c69ecc663e384d9 383 SUPERFAMILY SSF51679 3 359 1.44E-86 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_26150 d2660e45c2ab9cf8bffa62b7eae14687 226 SUPERFAMILY SSF46894 122 221 2.78E-27 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_26150 d2660e45c2ab9cf8bffa62b7eae14687 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 144 220 1.8E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_26150 d2660e45c2ab9cf8bffa62b7eae14687 226 SMART SM00448 1 109 3.3E-36 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_26150 d2660e45c2ab9cf8bffa62b7eae14687 226 Gene3D G3DSA:1.10.10.10 115 223 8.8E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_26150 d2660e45c2ab9cf8bffa62b7eae14687 226 Gene3D G3DSA:3.40.50.2300 1 114 2.9E-34 T 14-10-2018 AMIS_26150 d2660e45c2ab9cf8bffa62b7eae14687 226 SMART SM00862 144 220 4.9E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_26150 d2660e45c2ab9cf8bffa62b7eae14687 226 SUPERFAMILY SSF52172 1 121 3.98E-39 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_26150 d2660e45c2ab9cf8bffa62b7eae14687 226 Pfam PF00072 Response regulator receiver domain 1 109 4.3E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_64380 a387d522fd5e84a8c599cd8a4af3fa7c 294 SUPERFAMILY SSF52467 21 276 2.57E-70 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AMIS_64380 a387d522fd5e84a8c599cd8a4af3fa7c 294 Pfam PF02146 Sir2 family 29 230 2.4E-41 T 14-10-2018 IPR003000 Sirtuin family GO:0070403 AMIS_64380 a387d522fd5e84a8c599cd8a4af3fa7c 294 Gene3D G3DSA:3.40.50.1220 24 269 1.5E-71 T 14-10-2018 AMIS_64380 a387d522fd5e84a8c599cd8a4af3fa7c 294 Gene3D G3DSA:3.30.1600.10 38 200 1.5E-71 T 14-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily AMIS_13980 5047cc388788db8b7fcbf81df016a7ad 1020 SMART SM00028 643 676 12.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_13980 5047cc388788db8b7fcbf81df016a7ad 1020 SMART SM00028 720 753 22.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMIS_13980 5047cc388788db8b7fcbf81df016a7ad 1020 SUPERFAMILY SSF48452 641 750 3.48E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_13980 5047cc388788db8b7fcbf81df016a7ad 1020 Gene3D G3DSA:1.25.40.10 615 771 1.7E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_13980 5047cc388788db8b7fcbf81df016a7ad 1020 Pfam PF14903 WG containing repeat 838 867 0.02 T 14-10-2018 IPR032774 WG containing repeat AMIS_13980 5047cc388788db8b7fcbf81df016a7ad 1020 Pfam PF14903 WG containing repeat 877 908 1.3E-6 T 14-10-2018 IPR032774 WG containing repeat AMIS_6490 150d950573000ae2412827c5933f56a4 154 Pfam PF00545 ribonuclease 85 152 5.2E-11 T 14-10-2018 IPR000026 Guanine-specific ribonuclease N1/T1/U2 GO:0003723|GO:0004521 AMIS_6490 150d950573000ae2412827c5933f56a4 154 Gene3D G3DSA:3.10.450.30 53 154 1.1E-11 T 14-10-2018 AMIS_6490 150d950573000ae2412827c5933f56a4 154 SUPERFAMILY SSF53933 68 153 1.05E-12 T 14-10-2018 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 AMIS_41130 516b016f1554f61d110c9013bd545e6b 324 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 30 107 1.1E-11 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AMIS_41130 516b016f1554f61d110c9013bd545e6b 324 Pfam PF00589 Phage integrase family 141 306 5.9E-23 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMIS_41130 516b016f1554f61d110c9013bd545e6b 324 Gene3D G3DSA:1.10.150.130 25 119 6.3E-15 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal AMIS_41130 516b016f1554f61d110c9013bd545e6b 324 SUPERFAMILY SSF56349 25 308 2.3E-36 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMIS_41130 516b016f1554f61d110c9013bd545e6b 324 Gene3D G3DSA:1.10.443.10 136 315 5.6E-32 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AMIS_9120 a48a9bc127e067951d8d4cd634d6ad30 474 TIGRFAM TIGR04267 mod_HExxH: HEXXH motif domain 97 306 2.5E-63 T 14-10-2018 IPR026337 HEXXH motif domain AMIS_9120 a48a9bc127e067951d8d4cd634d6ad30 474 TIGRFAM TIGR04267 mod_HExxH: HEXXH motif domain 13 88 2.5E-6 T 14-10-2018 IPR026337 HEXXH motif domain AMIS_64780 d26de34e01a3730b6c9718a9d5d15cd9 144 Pfam PF04075 F420H(2)-dependent quinone reductase 14 142 1.2E-49 T 14-10-2018 IPR004378 F420H(2)-dependent quinone reductase GO:0016491|GO:0055114 AMIS_64780 d26de34e01a3730b6c9718a9d5d15cd9 144 TIGRFAM TIGR00026 hi_GC_TIGR00026: deazaflavin-dependent oxidoreductase, nitroreductase family 32 142 4.9E-35 T 14-10-2018 IPR004378 F420H(2)-dependent quinone reductase GO:0016491|GO:0055114 AMIS_64780 d26de34e01a3730b6c9718a9d5d15cd9 144 Gene3D G3DSA:2.30.110.10 1 143 3.5E-54 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AMIS_21890 78b405efa0c8abe58692f9aa97a25103 65 SUPERFAMILY SSF54593 3 56 1.97E-14 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_21890 78b405efa0c8abe58692f9aa97a25103 65 Gene3D G3DSA:3.10.180.10 2 60 1.4E-12 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_52920 49ab8ba966dbe6f4312c03124af2d58e 304 Pfam PF01032 FecCD transport family 1 301 2.9E-87 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AMIS_52920 49ab8ba966dbe6f4312c03124af2d58e 304 SUPERFAMILY SSF81345 2 301 1.57E-75 T 14-10-2018 IPR037294 ABC transporter, BtuC-like AMIS_52920 49ab8ba966dbe6f4312c03124af2d58e 304 Gene3D G3DSA:1.10.3470.10 1 304 1.7E-90 T 14-10-2018 IPR037294 ABC transporter, BtuC-like AMIS_11240 0272ce705c2ae5816ccaea9850f7b023 220 SUPERFAMILY SSF52096 26 209 7.69E-62 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMIS_11240 0272ce705c2ae5816ccaea9850f7b023 220 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 18 209 39.765 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMIS_11240 0272ce705c2ae5816ccaea9850f7b023 220 PRINTS PR00127 Clp protease catalytic subunit P signature 34 49 2.9E-42 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMIS_11240 0272ce705c2ae5816ccaea9850f7b023 220 PRINTS PR00127 Clp protease catalytic subunit P signature 184 203 2.9E-42 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMIS_11240 0272ce705c2ae5816ccaea9850f7b023 220 PRINTS PR00127 Clp protease catalytic subunit P signature 126 145 2.9E-42 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMIS_11240 0272ce705c2ae5816ccaea9850f7b023 220 PRINTS PR00127 Clp protease catalytic subunit P signature 105 122 2.9E-42 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMIS_11240 0272ce705c2ae5816ccaea9850f7b023 220 PRINTS PR00127 Clp protease catalytic subunit P signature 74 94 2.9E-42 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMIS_11240 0272ce705c2ae5816ccaea9850f7b023 220 Gene3D G3DSA:3.90.226.10 11 216 1.4E-73 T 14-10-2018 AMIS_11240 0272ce705c2ae5816ccaea9850f7b023 220 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 105 116 - T 14-10-2018 IPR018215 ClpP, Ser active site AMIS_11240 0272ce705c2ae5816ccaea9850f7b023 220 Pfam PF00574 Clp protease 33 208 1.1E-75 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA AMIS_46620 ba9bb2dd9c4b30ef692c11b57e9bd400 466 Gene3D G3DSA:1.20.1250.20 188 450 3.7E-22 T 14-10-2018 AMIS_46620 ba9bb2dd9c4b30ef692c11b57e9bd400 466 SUPERFAMILY SSF103473 187 448 5.49E-29 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_46620 ba9bb2dd9c4b30ef692c11b57e9bd400 466 Pfam PF07690 Major Facilitator Superfamily 7 400 1.3E-41 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_46620 ba9bb2dd9c4b30ef692c11b57e9bd400 466 Gene3D G3DSA:1.20.1720.10 3 187 3.7E-40 T 14-10-2018 AMIS_46620 ba9bb2dd9c4b30ef692c11b57e9bd400 466 SUPERFAMILY SSF103473 2 181 7.72E-37 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_71600 72f2c27a5e74027bfba98d052dd91900 1645 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 115 1637 0.0 T 14-10-2018 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 AMIS_71600 72f2c27a5e74027bfba98d052dd91900 1645 SUPERFAMILY SSF51735 981 1271 1.05E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_71600 72f2c27a5e74027bfba98d052dd91900 1645 SUPERFAMILY SSF53223 797 976 8.28E-27 T 14-10-2018 AMIS_71600 72f2c27a5e74027bfba98d052dd91900 1645 PIRSF PIRSF036761 38 1644 0.0 T 14-10-2018 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 AMIS_18250 79ee845b496f0b76e47446821b9addd9 168 SMART SM00065 31 167 0.002 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_18250 79ee845b496f0b76e47446821b9addd9 168 SUPERFAMILY SSF55781 35 167 1.11E-16 T 14-10-2018 AMIS_18250 79ee845b496f0b76e47446821b9addd9 168 Pfam PF13185 GAF domain 83 164 1.6E-8 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_18250 79ee845b496f0b76e47446821b9addd9 168 Gene3D G3DSA:3.30.450.40 17 168 7.5E-19 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_62250 0cb9570e4728a948e611093afc21d280 266 SUPERFAMILY SSF88713 58 255 1.84E-50 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AMIS_62250 0cb9570e4728a948e611093afc21d280 266 Gene3D G3DSA:3.20.20.370 43 258 5.0E-54 T 14-10-2018 AMIS_62250 0cb9570e4728a948e611093afc21d280 266 Pfam PF01522 Polysaccharide deacetylase 64 184 7.7E-32 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMIS_5210 c2ce251990f76a32af8969bce69c4d11 273 SUPERFAMILY SSF56655 4 262 4.97E-55 T 14-10-2018 AMIS_5210 c2ce251990f76a32af8969bce69c4d11 273 Gene3D G3DSA:3.40.190.80 166 262 2.1E-14 T 14-10-2018 AMIS_5210 c2ce251990f76a32af8969bce69c4d11 273 Pfam PF00459 Inositol monophosphatase family 8 253 2.5E-41 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMIS_5210 c2ce251990f76a32af8969bce69c4d11 273 PRINTS PR00377 Inositol monophosphatase superfamily signature 85 101 5.0E-10 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMIS_5210 c2ce251990f76a32af8969bce69c4d11 273 PRINTS PR00377 Inositol monophosphatase superfamily signature 58 74 5.0E-10 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMIS_5210 c2ce251990f76a32af8969bce69c4d11 273 PRINTS PR00377 Inositol monophosphatase superfamily signature 36 56 5.0E-10 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMIS_5210 c2ce251990f76a32af8969bce69c4d11 273 PRINTS PR00377 Inositol monophosphatase superfamily signature 134 157 5.0E-10 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMIS_5210 c2ce251990f76a32af8969bce69c4d11 273 Gene3D G3DSA:3.30.540.10 1 147 1.2E-33 T 14-10-2018 AMIS_19220 36661a04488a9a987085eb1a573361a5 198 Pfam PF05685 Putative restriction endonuclease 20 188 4.3E-24 T 14-10-2018 IPR008538 Domain of unknown function DUF820 AMIS_19220 36661a04488a9a987085eb1a573361a5 198 SUPERFAMILY SSF52980 20 163 5.36E-16 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AMIS_19220 36661a04488a9a987085eb1a573361a5 198 Gene3D G3DSA:3.90.1570.10 12 183 6.2E-14 T 14-10-2018 AMIS_22690 ce44f1715dad7c3547c6c66bf6ec601f 412 SUPERFAMILY SSF103473 15 398 1.01E-46 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_22690 ce44f1715dad7c3547c6c66bf6ec601f 412 Pfam PF05977 Transmembrane secretion effector 7 399 3.6E-57 T 14-10-2018 IPR010290 Transmembrane secretion effector AMIS_22690 ce44f1715dad7c3547c6c66bf6ec601f 412 Gene3D G3DSA:1.20.1250.20 16 398 1.3E-38 T 14-10-2018 AMIS_59910 61c52faea4204009b56fc701f622f83c 259 Gene3D G3DSA:3.40.50.720 1 224 2.4E-51 T 14-10-2018 AMIS_59910 61c52faea4204009b56fc701f622f83c 259 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 166 6.2E-19 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AMIS_59910 61c52faea4204009b56fc701f622f83c 259 SUPERFAMILY SSF51735 2 212 8.76E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_33100 b2eb2eab7a3b87247810d24797f4f116 335 Gene3D G3DSA:3.40.50.720 126 275 7.2E-70 T 14-10-2018 AMIS_33100 b2eb2eab7a3b87247810d24797f4f116 335 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 88 5.4E-5 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMIS_33100 b2eb2eab7a3b87247810d24797f4f116 335 SMART SM00829 10 333 1.5E-12 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMIS_33100 b2eb2eab7a3b87247810d24797f4f116 335 Pfam PF00107 Zinc-binding dehydrogenase 162 276 5.6E-22 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMIS_33100 b2eb2eab7a3b87247810d24797f4f116 335 SUPERFAMILY SSF51735 116 289 1.76E-29 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_33100 b2eb2eab7a3b87247810d24797f4f116 335 Gene3D G3DSA:3.90.180.10 10 331 7.2E-70 T 14-10-2018 AMIS_33100 b2eb2eab7a3b87247810d24797f4f116 335 SUPERFAMILY SSF50129 1 137 6.54E-33 T 14-10-2018 IPR011032 GroES-like superfamily AMIS_29310 d7be6d0a45cc7c819f99bae1e71e6389 424 Pfam PF00144 Beta-lactamase 41 418 2.8E-63 T 14-10-2018 IPR001466 Beta-lactamase-related AMIS_29310 d7be6d0a45cc7c819f99bae1e71e6389 424 Gene3D G3DSA:3.40.710.10 36 420 1.1E-100 T 14-10-2018 AMIS_29310 d7be6d0a45cc7c819f99bae1e71e6389 424 SUPERFAMILY SSF56601 35 409 1.54E-79 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMIS_57860 7b0b49862d35f3d38c6007f9d070fd7b 70 SUPERFAMILY SSF55008 1 66 2.09E-18 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 AMIS_57860 7b0b49862d35f3d38c6007f9d070fd7b 70 PRINTS PR00944 Copper ion binding protein signature 53 66 5.9E-5 T 14-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 AMIS_57860 7b0b49862d35f3d38c6007f9d070fd7b 70 PRINTS PR00944 Copper ion binding protein signature 15 28 5.9E-5 T 14-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 AMIS_57860 7b0b49862d35f3d38c6007f9d070fd7b 70 PRINTS PR00944 Copper ion binding protein signature 3 15 5.9E-5 T 14-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 AMIS_57860 7b0b49862d35f3d38c6007f9d070fd7b 70 Pfam PF00403 Heavy-metal-associated domain 5 65 4.3E-14 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AMIS_57860 7b0b49862d35f3d38c6007f9d070fd7b 70 ProSitePatterns PS01047 Heavy-metal-associated domain. 8 37 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AMIS_57860 7b0b49862d35f3d38c6007f9d070fd7b 70 Gene3D G3DSA:3.30.70.100 1 67 8.1E-20 T 14-10-2018 AMIS_12520 5a34465ddbb6bdfecf7cec489571c640 375 SUPERFAMILY SSF51126 74 362 4.3E-21 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor AMIS_33280 e5b2613826bcb53d1ca18a7dc9b6dca9 240 Gene3D G3DSA:2.40.260.10 87 240 1.9E-20 T 14-10-2018 IPR023365 Sortase domain superfamily AMIS_33280 e5b2613826bcb53d1ca18a7dc9b6dca9 240 SUPERFAMILY SSF63817 92 237 1.2E-9 T 14-10-2018 IPR023365 Sortase domain superfamily AMIS_33280 e5b2613826bcb53d1ca18a7dc9b6dca9 240 Pfam PF04203 Sortase family 98 238 2.3E-13 T 14-10-2018 IPR005754 Sortase family AMIS_17320 fbe539628789d33cf2c95b7a3103d7db 244 Pfam PF00535 Glycosyl transferase family 2 5 133 3.0E-25 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AMIS_17320 fbe539628789d33cf2c95b7a3103d7db 244 Gene3D G3DSA:3.90.550.10 2 219 1.7E-31 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_17320 fbe539628789d33cf2c95b7a3103d7db 244 SUPERFAMILY SSF53448 3 230 2.81E-36 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_73450 5d361505840fd6c61e954114be17efc6 243 SMART SM00563 37 151 6.8E-35 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AMIS_73450 5d361505840fd6c61e954114be17efc6 243 SUPERFAMILY SSF69593 19 210 7.85E-37 T 14-10-2018 AMIS_73450 5d361505840fd6c61e954114be17efc6 243 Pfam PF01553 Acyltransferase 22 148 7.6E-28 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AMIS_39650 c68a48357c2b4a8d91f7f3bbc36ab32d 355 Gene3D G3DSA:3.40.190.10 129 229 4.2E-40 T 14-10-2018 AMIS_39650 c68a48357c2b4a8d91f7f3bbc36ab32d 355 SUPERFAMILY SSF53850 48 274 3.8E-24 T 14-10-2018 AMIS_39650 c68a48357c2b4a8d91f7f3bbc36ab32d 355 Gene3D G3DSA:3.40.190.10 59 321 4.2E-40 T 14-10-2018 AMIS_39650 c68a48357c2b4a8d91f7f3bbc36ab32d 355 Pfam PF09084 NMT1/THI5 like 129 221 2.1E-9 T 14-10-2018 IPR015168 SsuA/THI5-like AMIS_70670 45f74a672f94b01007db0297a2b12a22 330 Hamap MF_00019 Phosphate acyltransferase [plsX]. 34 330 55.315 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 AMIS_70670 45f74a672f94b01007db0297a2b12a22 330 Pfam PF02504 Fatty acid synthesis protein 34 259 1.6E-51 T 14-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 AMIS_70670 45f74a672f94b01007db0297a2b12a22 330 PIRSF PIRSF002465 269 328 0.0017 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 AMIS_70670 45f74a672f94b01007db0297a2b12a22 330 PIRSF PIRSF002465 31 271 6.3E-57 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 AMIS_70670 45f74a672f94b01007db0297a2b12a22 330 Gene3D G3DSA:3.40.718.10 32 274 4.1E-64 T 14-10-2018 AMIS_70670 45f74a672f94b01007db0297a2b12a22 330 SUPERFAMILY SSF53659 34 322 1.15E-56 T 14-10-2018 AMIS_68450 205146792e24d831bccdd12f1832911f 677 Gene3D G3DSA:1.20.1740.10 50 497 4.1E-19 T 14-10-2018 AMIS_68450 205146792e24d831bccdd12f1832911f 677 Pfam PF13520 Amino acid permease 63 460 1.5E-24 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AMIS_10420 f5732056846f08a232774b65993d345c 541 SMART SM00642 15 418 3.4E-123 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMIS_10420 f5732056846f08a232774b65993d345c 541 Gene3D G3DSA:3.90.400.10 107 179 2.8E-150 T 14-10-2018 AMIS_10420 f5732056846f08a232774b65993d345c 541 Pfam PF11941 Domain of unknown function (DUF3459) 464 536 1.3E-5 T 14-10-2018 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) AMIS_10420 f5732056846f08a232774b65993d345c 541 Gene3D G3DSA:3.20.20.80 7 473 2.8E-150 T 14-10-2018 AMIS_10420 f5732056846f08a232774b65993d345c 541 SUPERFAMILY SSF51445 6 475 9.67E-127 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_10420 f5732056846f08a232774b65993d345c 541 Pfam PF00128 Alpha amylase, catalytic domain 30 389 1.9E-77 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMIS_56930 620f8422996dd6bca1df2df9886829e2 110 Gene3D G3DSA:3.30.70.100 1 97 3.5E-27 T 14-10-2018 AMIS_56930 620f8422996dd6bca1df2df9886829e2 110 Pfam PF05336 L-rhamnose mutarotase 3 105 1.3E-27 T 14-10-2018 IPR008000 Rhamnose/fucose mutarotase GO:0005737|GO:0016857 AMIS_56930 620f8422996dd6bca1df2df9886829e2 110 SUPERFAMILY SSF54909 1 105 1.07E-28 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel AMIS_4770 7fe86eabe9690b801c8e1d9cb929f43a 177 Pfam PF13628 Domain of unknown function (DUF4142) 28 160 9.4E-27 T 14-10-2018 IPR025419 Domain of unknown function DUF4142 AMIS_4770 7fe86eabe9690b801c8e1d9cb929f43a 177 Gene3D G3DSA:1.20.1260.10 8 168 4.5E-6 T 14-10-2018 IPR012347 Ferritin-like AMIS_10080 f2164f3ae55e74baf62f41c018274efe 184 Gene3D G3DSA:1.10.10.10 1 97 1.1E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_10080 f2164f3ae55e74baf62f41c018274efe 184 Pfam PF03551 Transcriptional regulator PadR-like family 14 86 2.0E-10 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal AMIS_10080 f2164f3ae55e74baf62f41c018274efe 184 SUPERFAMILY SSF46785 12 166 4.09E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_42910 d38b453bb15b3e3b63c17ed332994af3 777 SUPERFAMILY SSF50370 638 775 4.88E-34 T 14-10-2018 IPR035992 Ricin B-like lectins AMIS_42910 d38b453bb15b3e3b63c17ed332994af3 777 Pfam PF14200 Ricin-type beta-trefoil lectin domain-like 629 715 2.0E-13 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_42910 d38b453bb15b3e3b63c17ed332994af3 777 Pfam PF14200 Ricin-type beta-trefoil lectin domain-like 724 776 6.3E-11 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_42910 d38b453bb15b3e3b63c17ed332994af3 777 Gene3D G3DSA:2.80.10.50 724 777 9.1E-12 T 14-10-2018 AMIS_42910 d38b453bb15b3e3b63c17ed332994af3 777 Pfam PF07944 Beta-L-arabinofuranosidase, GH127 58 574 9.7E-137 T 14-10-2018 IPR012878 Beta-L-arabinofuranosidase, GH127 AMIS_42910 d38b453bb15b3e3b63c17ed332994af3 777 SUPERFAMILY SSF48208 112 399 3.23E-12 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AMIS_42910 d38b453bb15b3e3b63c17ed332994af3 777 Gene3D G3DSA:2.80.10.50 592 723 1.8E-17 T 14-10-2018 AMIS_60030 5d6dbdce9fda8c08cbda2130389f9139 116 SUPERFAMILY SSF54593 4 115 6.71E-18 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_60030 5d6dbdce9fda8c08cbda2130389f9139 116 Gene3D G3DSA:3.10.180.10 2 116 2.6E-33 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_75740 1696de88bf5d7b8924d9c0a59aa2f67d 155 Gene3D G3DSA:1.20.90.10 28 148 1.5E-38 T 14-10-2018 IPR036444 Phospholipase A2 domain superfamily GO:0004623|GO:0006644|GO:0050482 KEGG: 00564+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AMIS_75740 1696de88bf5d7b8924d9c0a59aa2f67d 155 SUPERFAMILY SSF48619 30 147 3.01E-31 T 14-10-2018 IPR036444 Phospholipase A2 domain superfamily GO:0004623|GO:0006644|GO:0050482 KEGG: 00564+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AMIS_75740 1696de88bf5d7b8924d9c0a59aa2f67d 155 Pfam PF09056 Prokaryotic phospholipase A2 46 147 2.5E-31 T 14-10-2018 IPR015141 Phospholipase A2, prokaryotic/fungal AMIS_5740 49fd106da673d347b95c44efcf84e5b9 224 Pfam PF03473 MOSC domain 57 170 6.9E-22 T 14-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 AMIS_5740 49fd106da673d347b95c44efcf84e5b9 224 SUPERFAMILY SSF50800 2 218 6.28E-54 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily AMIS_5740 49fd106da673d347b95c44efcf84e5b9 224 Gene3D G3DSA:2.40.33.20 1 224 3.1E-64 T 14-10-2018 AMIS_15860 6213214f5136d9775656412f2aeeb0bc 265 Gene3D G3DSA:3.40.50.150 51 254 1.6E-37 T 14-10-2018 AMIS_15860 6213214f5136d9775656412f2aeeb0bc 265 Pfam PF08241 Methyltransferase domain 67 163 1.4E-18 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 AMIS_15860 6213214f5136d9775656412f2aeeb0bc 265 SUPERFAMILY SSF53335 14 245 8.6E-37 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_54540 2998bce17b998ef5408a9c49796c1f46 270 SUPERFAMILY SSF53335 28 239 9.93E-27 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_54540 2998bce17b998ef5408a9c49796c1f46 270 Gene3D G3DSA:3.40.50.150 11 268 4.8E-59 T 14-10-2018 AMIS_36300 bfed0ca78ea50f8369c4a78c765ef764 130 Pfam PF00293 NUDIX domain 11 107 7.3E-10 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMIS_36300 bfed0ca78ea50f8369c4a78c765ef764 130 SUPERFAMILY SSF55811 6 111 2.17E-19 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMIS_36300 bfed0ca78ea50f8369c4a78c765ef764 130 ProSitePatterns PS00893 Nudix box signature. 31 52 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMIS_36300 bfed0ca78ea50f8369c4a78c765ef764 130 Gene3D G3DSA:3.90.79.10 2 129 9.3E-19 T 14-10-2018 AMIS_43410 aee7bd1e4a556733a23b7e2b7859c4d5 158 SUPERFAMILY SSF46785 77 139 1.49E-9 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_43410 aee7bd1e4a556733a23b7e2b7859c4d5 158 Pfam PF12840 Helix-turn-helix domain 80 138 6.6E-9 T 14-10-2018 AMIS_43410 aee7bd1e4a556733a23b7e2b7859c4d5 158 Gene3D G3DSA:1.10.10.10 71 146 5.2E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_70830 128204845adc0960225163fb80913ca1 361 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 8 353 6.6E-108 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMIS_70830 128204845adc0960225163fb80913ca1 361 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 7 354 40.635 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMIS_70830 128204845adc0960225163fb80913ca1 361 Gene3D G3DSA:3.40.50.20 2 132 1.7E-38 T 14-10-2018 AMIS_70830 128204845adc0960225163fb80913ca1 361 PIRSF PIRSF039102 4 359 8.5E-112 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMIS_70830 128204845adc0960225163fb80913ca1 361 SUPERFAMILY SSF52440 6 143 6.91E-35 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AMIS_70830 128204845adc0960225163fb80913ca1 361 Pfam PF01820 D-ala D-ala ligase N-terminus 8 133 4.1E-31 T 14-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMIS_70830 128204845adc0960225163fb80913ca1 361 Pfam PF07478 D-ala D-ala ligase C-terminus 152 350 9.5E-66 T 14-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMIS_70830 128204845adc0960225163fb80913ca1 361 Gene3D G3DSA:3.30.470.20 133 356 3.9E-75 T 14-10-2018 AMIS_70830 128204845adc0960225163fb80913ca1 361 Gene3D G3DSA:3.30.1490.20 159 225 3.9E-75 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AMIS_70830 128204845adc0960225163fb80913ca1 361 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 296 324 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMIS_70830 128204845adc0960225163fb80913ca1 361 SUPERFAMILY SSF56059 144 355 1.33E-56 T 14-10-2018 AMIS_70830 128204845adc0960225163fb80913ca1 361 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 111 122 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMIS_64960 1e6db6f02fa2802c23c74e7997f55c8f 221 SMART SM00382 29 211 5.3E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_64960 1e6db6f02fa2802c23c74e7997f55c8f 221 Gene3D G3DSA:3.40.50.300 2 220 8.8E-58 T 14-10-2018 AMIS_64960 1e6db6f02fa2802c23c74e7997f55c8f 221 SUPERFAMILY SSF52540 4 218 1.62E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_64960 1e6db6f02fa2802c23c74e7997f55c8f 221 Pfam PF00005 ABC transporter 20 164 2.2E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_24700 819508a7fc473860786b693bd13fc155 396 SMART SM00331 176 390 9.4E-40 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_24700 819508a7fc473860786b693bd13fc155 396 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 205 390 8.5E-42 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_24700 819508a7fc473860786b693bd13fc155 396 SUPERFAMILY SSF81606 193 390 1.39E-11 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_24700 819508a7fc473860786b693bd13fc155 396 Gene3D G3DSA:3.60.40.10 171 390 2.9E-54 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_16400 9f54438b6776f7837884ee2cf75cd6a0 301 Pfam PF04228 Putative neutral zinc metallopeptidase 10 295 5.2E-84 T 14-10-2018 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative AMIS_77880 9db179a3ac224e97e32c83a79bef90a5 293 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 57 70 - T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMIS_77880 9db179a3ac224e97e32c83a79bef90a5 293 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 23 38 - T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMIS_77880 9db179a3ac224e97e32c83a79bef90a5 293 Gene3D G3DSA:3.20.20.20 4 288 3.4E-107 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMIS_77880 9db179a3ac224e97e32c83a79bef90a5 293 Pfam PF00809 Pterin binding enzyme 24 269 5.5E-86 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMIS_77880 9db179a3ac224e97e32c83a79bef90a5 293 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 23 283 4.4E-93 T 14-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 AMIS_77880 9db179a3ac224e97e32c83a79bef90a5 293 SUPERFAMILY SSF51717 21 283 8.24E-95 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMIS_73820 3b0a26659d506fa1af7d8ffe28d8be26 421 Gene3D G3DSA:3.40.50.2300 160 297 1.6E-76 T 14-10-2018 AMIS_73820 3b0a26659d506fa1af7d8ffe28d8be26 421 SUPERFAMILY SSF53822 40 390 1.1E-62 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_73820 3b0a26659d506fa1af7d8ffe28d8be26 421 Pfam PF13458 Periplasmic binding protein 41 386 1.7E-57 T 14-10-2018 IPR028081 Leucine-binding protein domain AMIS_73820 3b0a26659d506fa1af7d8ffe28d8be26 421 Gene3D G3DSA:3.40.50.2300 49 353 1.6E-76 T 14-10-2018 AMIS_80960 6abb2534f61d8da5e79b5327475d50e0 819 Gene3D G3DSA:3.40.710.10 336 741 7.0E-80 T 14-10-2018 AMIS_80960 6abb2534f61d8da5e79b5327475d50e0 819 SUPERFAMILY SSF56601 283 732 4.27E-59 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMIS_80960 6abb2534f61d8da5e79b5327475d50e0 819 Gene3D G3DSA:1.10.3810.10 114 317 1.3E-62 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMIS_80960 6abb2534f61d8da5e79b5327475d50e0 819 SUPERFAMILY SSF53955 109 320 4.78E-57 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily AMIS_80960 6abb2534f61d8da5e79b5327475d50e0 819 Pfam PF00905 Penicillin binding protein transpeptidase domain 402 684 4.6E-22 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AMIS_80960 6abb2534f61d8da5e79b5327475d50e0 819 Pfam PF00912 Transglycosylase 128 301 1.4E-49 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMIS_5150 d8975c0f086de2e4667d7b5d62125d36 94 Pfam PF01713 Smr domain 5 82 1.9E-13 T 14-10-2018 IPR002625 Smr domain AMIS_5150 d8975c0f086de2e4667d7b5d62125d36 94 Gene3D G3DSA:3.30.1370.110 1 83 1.2E-12 T 14-10-2018 AMIS_5150 d8975c0f086de2e4667d7b5d62125d36 94 SUPERFAMILY SSF160443 4 80 5.36E-5 T 14-10-2018 IPR036063 Smr domain superfamily AMIS_79910 ebc21257f6088494b2488d0f5607c881 327 Pfam PF07859 alpha/beta hydrolase fold 84 295 2.7E-53 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 AMIS_79910 ebc21257f6088494b2488d0f5607c881 327 SUPERFAMILY SSF53474 43 319 1.92E-61 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_79910 ebc21257f6088494b2488d0f5607c881 327 Gene3D G3DSA:3.40.50.1820 7 323 1.3E-78 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_40700 a463c206fb8efaf9ddf735e93a613233 274 Gene3D G3DSA:3.20.20.370 76 274 2.2E-73 T 14-10-2018 AMIS_40700 a463c206fb8efaf9ddf735e93a613233 274 SUPERFAMILY SSF88713 89 272 3.89E-63 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AMIS_40700 a463c206fb8efaf9ddf735e93a613233 274 Pfam PF01522 Polysaccharide deacetylase 89 208 2.5E-36 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMIS_37110 7e3288eee08058160674db8469dce0ee 145 Gene3D G3DSA:3.30.565.10 30 145 1.8E-23 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_37110 7e3288eee08058160674db8469dce0ee 145 SUPERFAMILY SSF55874 43 143 1.26E-9 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_37110 7e3288eee08058160674db8469dce0ee 145 Pfam PF13581 Histidine kinase-like ATPase domain 32 142 6.5E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_25200 d5a50e010e5826163d738c873cd29811 156 Gene3D G3DSA:1.20.1250.20 6 154 1.8E-14 T 14-10-2018 AMIS_25200 d5a50e010e5826163d738c873cd29811 156 Pfam PF07690 Major Facilitator Superfamily 25 145 4.7E-11 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_25200 d5a50e010e5826163d738c873cd29811 156 SUPERFAMILY SSF103473 16 147 2.88E-14 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_23620 cac1e69cf8928880cb73a21c86c010c7 301 Gene3D G3DSA:1.10.10.10 1 90 1.9E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_23620 cac1e69cf8928880cb73a21c86c010c7 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 3.2E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMIS_23620 cac1e69cf8928880cb73a21c86c010c7 301 SUPERFAMILY SSF53850 86 299 1.59E-23 T 14-10-2018 AMIS_23620 cac1e69cf8928880cb73a21c86c010c7 301 Gene3D G3DSA:3.40.190.290 91 300 7.2E-26 T 14-10-2018 AMIS_23620 cac1e69cf8928880cb73a21c86c010c7 301 Pfam PF03466 LysR substrate binding domain 87 296 5.1E-27 T 14-10-2018 IPR005119 LysR, substrate-binding AMIS_23620 cac1e69cf8928880cb73a21c86c010c7 301 SUPERFAMILY SSF46785 1 110 1.27E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_48870 68586aa7842d21192dcca03c856fb67c 217 Pfam PF13673 Acetyltransferase (GNAT) domain 151 199 2.9E-6 T 14-10-2018 IPR000182 GNAT domain AMIS_48870 68586aa7842d21192dcca03c856fb67c 217 Gene3D G3DSA:3.40.630.30 1 216 2.7E-59 T 14-10-2018 AMIS_48870 68586aa7842d21192dcca03c856fb67c 217 SUPERFAMILY SSF55729 4 202 5.15E-17 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_59650 6d777c99a1cbb7d5d52fe95223533699 317 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 257 2.1E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_59650 6d777c99a1cbb7d5d52fe95223533699 317 Gene3D G3DSA:1.10.3720.10 9 264 1.2E-41 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_59650 6d777c99a1cbb7d5d52fe95223533699 317 SUPERFAMILY SSF161098 8 259 6.64E-42 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_44390 95886ee34826273ae38a1052b3c0857d 273 Pfam PF03239 Iron permease FTR1 family 3 253 1.5E-52 T 14-10-2018 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0016020|GO:0033573|GO:0034755 AMIS_1170 fee70b8a8c9fd513b9d66d24f155a039 87 Hamap MF_01926 Phosphoribosylformylglycinamidine synthase subunit PurS [purS]. 4 78 20.452 T 14-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 AMIS_1170 fee70b8a8c9fd513b9d66d24f155a039 87 Gene3D G3DSA:3.30.1280.10 4 84 5.9E-26 T 14-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AMIS_1170 fee70b8a8c9fd513b9d66d24f155a039 87 Pfam PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase 6 78 1.3E-25 T 14-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 AMIS_1170 fee70b8a8c9fd513b9d66d24f155a039 87 TIGRFAM TIGR00302 TIGR00302: phosphoribosylformylglycinamidine synthase, purS protein 6 79 9.1E-17 T 14-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 AMIS_1170 fee70b8a8c9fd513b9d66d24f155a039 87 ProDom PD010362 PHOSPHORIBOSYLFORMYLGLYCINAMIDINE PURS SYNTHETASE SYNTHASE COMPONENT SYNTHASE LIGASE FGAM UPF0062 I 12 78 7.0E-17 T 14-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 AMIS_1170 fee70b8a8c9fd513b9d66d24f155a039 87 SUPERFAMILY SSF82697 4 77 5.76E-23 T 14-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AMIS_78000 420e3cb87c2510d1cf607d693cc71ea5 870 Pfam PF01580 FtsK/SpoIIIE family 357 533 1.1E-15 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 AMIS_78000 420e3cb87c2510d1cf607d693cc71ea5 870 SUPERFAMILY SSF52540 351 560 9.35E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_78000 420e3cb87c2510d1cf607d693cc71ea5 870 Gene3D G3DSA:3.40.50.300 320 621 2.1E-48 T 14-10-2018 AMIS_78000 420e3cb87c2510d1cf607d693cc71ea5 870 Gene3D G3DSA:3.40.50.300 129 277 2.7E-8 T 14-10-2018 AMIS_22030 f4ec4b9c4cc75d2062c99dcd1a0ce0eb 273 SUPERFAMILY SSF53613 3 269 3.12E-43 T 14-10-2018 IPR029056 Ribokinase-like AMIS_22030 f4ec4b9c4cc75d2062c99dcd1a0ce0eb 273 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 229 242 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AMIS_22030 f4ec4b9c4cc75d2062c99dcd1a0ce0eb 273 Pfam PF00294 pfkB family carbohydrate kinase 191 269 7.8E-19 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB AMIS_22030 f4ec4b9c4cc75d2062c99dcd1a0ce0eb 273 Gene3D G3DSA:3.40.1190.20 2 272 1.9E-44 T 14-10-2018 IPR029056 Ribokinase-like AMIS_1180 88f0f1fe0cd2611d64666f1583d84f5b 235 Hamap MF_00421 Phosphoribosylformylglycinamidine synthase subunit PurQ [purQ]. 1 218 38.081 T 14-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 AMIS_1180 88f0f1fe0cd2611d64666f1583d84f5b 235 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 2 205 2.2E-34 T 14-10-2018 AMIS_1180 88f0f1fe0cd2611d64666f1583d84f5b 235 SMART SM01211 1 220 2.2E-118 T 14-10-2018 AMIS_1180 88f0f1fe0cd2611d64666f1583d84f5b 235 TIGRFAM TIGR01737 FGAM_synth_I: phosphoribosylformylglycinamidine synthase I 1 218 6.6E-76 T 14-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 AMIS_1180 88f0f1fe0cd2611d64666f1583d84f5b 235 PIRSF PIRSF001586 1 223 5.9E-77 T 14-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 AMIS_1180 88f0f1fe0cd2611d64666f1583d84f5b 235 SUPERFAMILY SSF52317 1 218 9.46E-67 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_1180 88f0f1fe0cd2611d64666f1583d84f5b 235 Gene3D G3DSA:3.40.50.880 1 221 5.0E-59 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_62720 ca1de384c2ae8460b0111df90ec53e3a 230 Gene3D G3DSA:3.60.15.10 3 221 1.1E-56 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMIS_62720 ca1de384c2ae8460b0111df90ec53e3a 230 SUPERFAMILY SSF56281 8 220 7.62E-49 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMIS_62720 ca1de384c2ae8460b0111df90ec53e3a 230 Pfam PF00753 Metallo-beta-lactamase superfamily 11 203 1.2E-24 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMIS_62720 ca1de384c2ae8460b0111df90ec53e3a 230 SMART SM00849 12 203 5.3E-34 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMIS_69290 0214f6695d49871b56613b33d64cbf35 394 Pfam PF09594 Glycosyltransferase family 87 64 301 4.8E-7 T 14-10-2018 IPR018584 Glycosyltransferase family 87 GO:0016758 AMIS_7600 2ee389108eadc5b70baa4a513187318e 164 SUPERFAMILY SSF55729 1 127 4.22E-24 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_7600 2ee389108eadc5b70baa4a513187318e 164 Pfam PF00583 Acetyltransferase (GNAT) family 37 117 4.0E-15 T 14-10-2018 IPR000182 GNAT domain AMIS_7600 2ee389108eadc5b70baa4a513187318e 164 Gene3D G3DSA:3.40.630.30 2 141 2.3E-31 T 14-10-2018 AMIS_6540 0bb39cc1875bf0db6a0bc7e7d90cf3b8 206 SUPERFAMILY SSF52540 19 190 1.86E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_6540 0bb39cc1875bf0db6a0bc7e7d90cf3b8 206 Pfam PF03029 Conserved hypothetical ATP binding protein 23 191 3.5E-25 T 14-10-2018 IPR004130 GPN-loop GTPase AMIS_6540 0bb39cc1875bf0db6a0bc7e7d90cf3b8 206 Gene3D G3DSA:3.40.50.300 12 196 8.0E-14 T 14-10-2018 AMIS_65320 6e48dc8e24971406420282d5e2f1e179 151 Gene3D G3DSA:1.10.10.10 1 140 2.5E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_65320 6e48dc8e24971406420282d5e2f1e179 151 Pfam PF02082 Transcriptional regulator 2 82 4.6E-23 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type AMIS_65320 6e48dc8e24971406420282d5e2f1e179 151 SUPERFAMILY SSF46785 3 131 3.33E-27 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_65320 6e48dc8e24971406420282d5e2f1e179 151 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 3 130 3.5E-32 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type AMIS_65320 6e48dc8e24971406420282d5e2f1e179 151 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 48 66 - T 14-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site AMIS_61720 fc1b822f205c5fb88981095afce84aca 369 Gene3D G3DSA:3.40.50.300 63 242 2.3E-23 T 14-10-2018 AMIS_61720 fc1b822f205c5fb88981095afce84aca 369 Pfam PF07728 AAA domain (dynein-related subfamily) 83 224 7.3E-33 T 14-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 AMIS_61720 fc1b822f205c5fb88981095afce84aca 369 SUPERFAMILY SSF52540 62 271 2.38E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_65420 cf024f6a554b3658a70f6095d4bb0646 334 PIRSF PIRSF035875 20 320 5.6E-46 T 14-10-2018 IPR017039 Virulence factor BrkB AMIS_65420 cf024f6a554b3658a70f6095d4bb0646 334 Pfam PF03631 Virulence factor BrkB 47 302 9.7E-39 T 14-10-2018 IPR017039 Virulence factor BrkB AMIS_65420 cf024f6a554b3658a70f6095d4bb0646 334 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 42 300 6.1E-23 T 14-10-2018 IPR017039 Virulence factor BrkB AMIS_28120 91ee7f48e2ecf9159a63c768053f19c7 418 Pfam PF13416 Bacterial extracellular solute-binding protein 64 360 2.8E-46 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein AMIS_28120 91ee7f48e2ecf9159a63c768053f19c7 418 Gene3D G3DSA:3.40.190.10 153 407 9.4E-66 T 14-10-2018 AMIS_28120 91ee7f48e2ecf9159a63c768053f19c7 418 Gene3D G3DSA:3.40.190.10 70 373 9.4E-66 T 14-10-2018 AMIS_28120 91ee7f48e2ecf9159a63c768053f19c7 418 SUPERFAMILY SSF53850 67 412 1.92E-57 T 14-10-2018 AMIS_51880 38501ab304025316b1c02fb79c4f9abd 311 Pfam PF05949 Bacterial protein of unknown function (DUF881) 130 273 6.0E-33 T 14-10-2018 IPR010273 Protein of unknown function DUF881 AMIS_51880 38501ab304025316b1c02fb79c4f9abd 311 Gene3D G3DSA:3.30.70.1880 128 283 8.5E-25 T 14-10-2018 AMIS_16930 03b8d57e7756d29a87dfe4b4b7408bbe 437 SUPERFAMILY SSF53850 19 435 4.73E-62 T 14-10-2018 AMIS_16930 03b8d57e7756d29a87dfe4b4b7408bbe 437 Pfam PF13416 Bacterial extracellular solute-binding protein 65 381 1.1E-35 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein AMIS_16930 03b8d57e7756d29a87dfe4b4b7408bbe 437 Gene3D G3DSA:3.40.190.10 157 430 1.4E-63 T 14-10-2018 AMIS_16930 03b8d57e7756d29a87dfe4b4b7408bbe 437 Gene3D G3DSA:3.40.190.10 64 391 1.4E-63 T 14-10-2018 AMIS_13720 bbf6537578bfd308957323cd28849707 454 Gene3D G3DSA:2.40.50.900 70 170 1.7E-22 T 14-10-2018 AMIS_13720 bbf6537578bfd308957323cd28849707 454 Pfam PF05108 Type VII secretion system ESX-1, transport TM domain B 3 446 7.0E-74 T 14-10-2018 IPR007795 Type VII secretion system EccB AMIS_13720 bbf6537578bfd308957323cd28849707 454 TIGRFAM TIGR03919 T7SS_EccB: type VII secretion protein EccB 3 440 3.4E-77 T 14-10-2018 IPR007795 Type VII secretion system EccB AMIS_79320 eff17da1892e668af79e9d2e0681da12 623 Pfam PF07732 Multicopper oxidase 212 325 5.3E-29 T 14-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 AMIS_79320 eff17da1892e668af79e9d2e0681da12 623 Gene3D G3DSA:2.60.40.420 179 323 6.4E-38 T 14-10-2018 IPR008972 Cupredoxin AMIS_79320 eff17da1892e668af79e9d2e0681da12 623 Gene3D G3DSA:2.60.40.420 487 617 1.1E-32 T 14-10-2018 IPR008972 Cupredoxin AMIS_79320 eff17da1892e668af79e9d2e0681da12 623 SUPERFAMILY SSF49503 360 430 1.9E-6 T 14-10-2018 IPR008972 Cupredoxin AMIS_79320 eff17da1892e668af79e9d2e0681da12 623 ProSitePatterns PS00080 Multicopper oxidases signature 2. 592 603 - T 14-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 AMIS_79320 eff17da1892e668af79e9d2e0681da12 623 SUPERFAMILY SSF49503 186 327 6.11E-33 T 14-10-2018 IPR008972 Cupredoxin AMIS_79320 eff17da1892e668af79e9d2e0681da12 623 SUPERFAMILY SSF49503 481 606 5.24E-33 T 14-10-2018 IPR008972 Cupredoxin AMIS_79320 eff17da1892e668af79e9d2e0681da12 623 Pfam PF07731 Multicopper oxidase 510 605 3.1E-24 T 14-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 AMIS_79320 eff17da1892e668af79e9d2e0681da12 623 Gene3D G3DSA:2.60.40.420 324 449 9.2E-12 T 14-10-2018 IPR008972 Cupredoxin AMIS_77320 1066281d036111837f01b9d1818a5273 362 Gene3D G3DSA:2.130.10.10 194 361 1.0E-25 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_77320 1066281d036111837f01b9d1818a5273 362 SUPERFAMILY SSF50998 14 317 5.69E-35 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AMIS_77320 1066281d036111837f01b9d1818a5273 362 SMART SM00564 227 259 24.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMIS_77320 1066281d036111837f01b9d1818a5273 362 SMART SM00564 104 140 19.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMIS_77320 1066281d036111837f01b9d1818a5273 362 SMART SM00564 65 95 110.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMIS_77320 1066281d036111837f01b9d1818a5273 362 SMART SM00564 264 295 19.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMIS_77320 1066281d036111837f01b9d1818a5273 362 SMART SM00564 188 220 280.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMIS_77320 1066281d036111837f01b9d1818a5273 362 Pfam PF13360 PQQ-like domain 125 268 3.5E-16 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat AMIS_77320 1066281d036111837f01b9d1818a5273 362 Gene3D G3DSA:2.140.10.10 6 193 1.8E-15 T 14-10-2018 AMIS_29790 3da9ac4236b3ff145812a34bb7ec31bd 173 SUPERFAMILY SSF88946 4 73 3.53E-11 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_29790 3da9ac4236b3ff145812a34bb7ec31bd 173 Gene3D G3DSA:1.10.1740.10 1 77 4.4E-9 T 14-10-2018 AMIS_29790 3da9ac4236b3ff145812a34bb7ec31bd 173 Pfam PF08281 Sigma-70, region 4 101 153 2.0E-14 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_29790 3da9ac4236b3ff145812a34bb7ec31bd 173 Pfam PF04542 Sigma-70 region 2 17 74 3.9E-9 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_29790 3da9ac4236b3ff145812a34bb7ec31bd 173 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 12 154 1.4E-17 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMIS_29790 3da9ac4236b3ff145812a34bb7ec31bd 173 SUPERFAMILY SSF88659 85 156 7.29E-15 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_29790 3da9ac4236b3ff145812a34bb7ec31bd 173 TIGRFAM TIGR02983 SigE-fam_strep: RNA polymerase sigma-70 factor, sigma-E family 4 157 4.9E-47 T 14-10-2018 IPR014325 RNA polymerase sigma-E factor, actinobacteria GO:0016987 AMIS_29790 3da9ac4236b3ff145812a34bb7ec31bd 173 Gene3D G3DSA:1.10.10.10 78 158 8.9E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_51290 0670f8c788cec632cc1a78a58a26318b 231 Pfam PF00005 ABC transporter 32 180 2.7E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_51290 0670f8c788cec632cc1a78a58a26318b 231 SUPERFAMILY SSF52540 12 230 4.73E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_51290 0670f8c788cec632cc1a78a58a26318b 231 Gene3D G3DSA:3.40.50.300 10 231 1.6E-67 T 14-10-2018 AMIS_51290 0670f8c788cec632cc1a78a58a26318b 231 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_51290 0670f8c788cec632cc1a78a58a26318b 231 SMART SM00382 41 229 1.3E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_37850 8f1a273bbe4af2590ab006c45458fff9 146 Gene3D G3DSA:2.60.40.790 2 134 4.3E-32 T 14-10-2018 IPR008978 HSP20-like chaperone AMIS_37850 8f1a273bbe4af2590ab006c45458fff9 146 SUPERFAMILY SSF49764 5 133 3.24E-32 T 14-10-2018 IPR008978 HSP20-like chaperone AMIS_37850 8f1a273bbe4af2590ab006c45458fff9 146 Pfam PF00011 Hsp20/alpha crystallin family 37 132 6.8E-22 T 14-10-2018 IPR002068 Alpha crystallin/Hsp20 domain AMIS_59740 6674982b512a3cf2198c370ca7373a4a 145 SUPERFAMILY SSF46785 11 136 3.11E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_59740 6674982b512a3cf2198c370ca7373a4a 145 Gene3D G3DSA:1.10.10.10 6 139 1.9E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_59740 6674982b512a3cf2198c370ca7373a4a 145 Pfam PF01047 MarR family 32 90 2.6E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_59740 6674982b512a3cf2198c370ca7373a4a 145 SMART SM00347 25 123 2.9E-17 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_25240 240259394d44f319256cf8d23215a468 529 SUPERFAMILY SSF51126 38 359 2.15E-68 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor AMIS_25240 240259394d44f319256cf8d23215a468 529 Pfam PF00544 Pectate lyase 78 282 1.6E-32 T 14-10-2018 IPR002022 Pectate lyase AMIS_25240 240259394d44f319256cf8d23215a468 529 SMART SM00656 78 288 2.9E-15 T 14-10-2018 IPR002022 Pectate lyase AMIS_25240 240259394d44f319256cf8d23215a468 529 SUPERFAMILY SSF49785 412 527 2.98E-5 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_25240 240259394d44f319256cf8d23215a468 529 Gene3D G3DSA:2.160.20.10 35 359 2.8E-95 T 14-10-2018 IPR012334 Pectin lyase fold AMIS_25240 240259394d44f319256cf8d23215a468 529 Gene3D G3DSA:2.60.120.260 423 528 8.6E-10 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_80770 d34dcf6b3061b0ee3793d67b6fcb75ba 144 SUPERFAMILY SSF54690 11 142 9.15E-39 T 14-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 AMIS_80770 d34dcf6b3061b0ee3793d67b6fcb75ba 144 Gene3D G3DSA:3.90.1170.40 3 142 7.9E-44 T 14-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 AMIS_80770 d34dcf6b3061b0ee3793d67b6fcb75ba 144 Pfam PF02391 MoaE protein 14 124 8.9E-35 T 14-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 AMIS_71430 3e4a686cb7cf12e22298c0c97908dcc1 310 SUPERFAMILY SSF52467 186 304 6.54E-47 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AMIS_71430 3e4a686cb7cf12e22298c0c97908dcc1 310 SUPERFAMILY SSF52402 4 178 6.77E-35 T 14-10-2018 AMIS_71430 3e4a686cb7cf12e22298c0c97908dcc1 310 Pfam PF01012 Electron transfer flavoprotein domain 4 164 2.3E-29 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AMIS_71430 3e4a686cb7cf12e22298c0c97908dcc1 310 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 187 269 1.9E-36 T 14-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 AMIS_71430 3e4a686cb7cf12e22298c0c97908dcc1 310 Gene3D G3DSA:3.40.50.620 2 179 7.0E-36 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMIS_71430 3e4a686cb7cf12e22298c0c97908dcc1 310 SMART SM00893 4 178 2.0E-27 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AMIS_71430 3e4a686cb7cf12e22298c0c97908dcc1 310 Gene3D G3DSA:3.40.50.1220 180 310 1.6E-55 T 14-10-2018 AMIS_71430 3e4a686cb7cf12e22298c0c97908dcc1 310 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 250 276 - T 14-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 AMIS_71430 3e4a686cb7cf12e22298c0c97908dcc1 310 PIRSF PIRSF000089 1 310 1.9E-98 T 14-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 AMIS_19120 4a0660892ea532af5fdaf00ca82e7c5d 261 SUPERFAMILY SSF56529 4 257 5.95E-76 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AMIS_19120 4a0660892ea532af5fdaf00ca82e7c5d 261 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 101 257 5.6E-11 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 AMIS_19120 4a0660892ea532af5fdaf00ca82e7c5d 261 Gene3D G3DSA:3.90.850.10 1 257 8.4E-85 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AMIS_53420 41aae06636ca228d8d82c0c23bb55f39 117 Gene3D G3DSA:3.30.750.24 10 117 2.8E-20 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_53420 41aae06636ca228d8d82c0c23bb55f39 117 SUPERFAMILY SSF52091 14 115 5.89E-18 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_53420 41aae06636ca228d8d82c0c23bb55f39 117 Pfam PF13466 STAS domain 22 107 4.4E-11 T 14-10-2018 IPR002645 STAS domain AMIS_64750 6f6012921337b6d18d1a27020ddb7f67 400 SUPERFAMILY SSF69322 102 320 8.89E-6 T 14-10-2018 AMIS_30500 0f4e028e59ab1a106fa7a3e2af70a8dd 148 Pfam PF13581 Histidine kinase-like ATPase domain 50 137 8.0E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_30500 0f4e028e59ab1a106fa7a3e2af70a8dd 148 SUPERFAMILY SSF55874 49 140 2.69E-6 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_30500 0f4e028e59ab1a106fa7a3e2af70a8dd 148 Gene3D G3DSA:3.30.565.10 13 147 1.5E-17 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_14330 7622e012c532dfea3951da85c7dad873 375 Gene3D G3DSA:3.40.50.2000 5 362 1.9E-116 T 14-10-2018 AMIS_14330 7622e012c532dfea3951da85c7dad873 375 Pfam PF00534 Glycosyl transferases group 1 183 354 8.5E-38 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 AMIS_14330 7622e012c532dfea3951da85c7dad873 375 Gene3D G3DSA:3.40.50.2000 169 361 1.9E-116 T 14-10-2018 AMIS_14330 7622e012c532dfea3951da85c7dad873 375 SUPERFAMILY SSF53756 5 373 7.46E-72 T 14-10-2018 AMIS_30610 7f09fba6a8979a0dd71708736f62d3ed 194 SUPERFAMILY SSF48498 98 171 3.47E-6 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_30610 7f09fba6a8979a0dd71708736f62d3ed 194 SUPERFAMILY SSF46689 4 69 2.67E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_30610 7f09fba6a8979a0dd71708736f62d3ed 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 55 4.8E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_30610 7f09fba6a8979a0dd71708736f62d3ed 194 Gene3D G3DSA:1.10.357.10 4 188 2.8E-47 T 14-10-2018 AMIS_15430 3029d3bc5928bd6b45ea69ba4e0b8592 203 Gene3D G3DSA:3.30.230.40 1 90 1.2E-36 T 14-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 AMIS_15430 3029d3bc5928bd6b45ea69ba4e0b8592 203 SUPERFAMILY SSF54211 88 187 4.43E-26 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMIS_15430 3029d3bc5928bd6b45ea69ba4e0b8592 203 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 3 203 41.316 T 14-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AMIS_15430 3029d3bc5928bd6b45ea69ba4e0b8592 203 SUPERFAMILY SSF54211 3 87 5.82E-32 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMIS_15430 3029d3bc5928bd6b45ea69ba4e0b8592 203 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 62 75 - T 14-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AMIS_15430 3029d3bc5928bd6b45ea69ba4e0b8592 203 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 32 182 1.6E-58 T 14-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AMIS_15430 3029d3bc5928bd6b45ea69ba4e0b8592 203 Gene3D G3DSA:3.30.230.40 91 203 7.8E-32 T 14-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 AMIS_24830 9a9838211a5ce4858e7affdc4bd38439 211 SUPERFAMILY SSF46689 13 80 8.98E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_24830 9a9838211a5ce4858e7affdc4bd38439 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 65 6.5E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_24830 9a9838211a5ce4858e7affdc4bd38439 211 Gene3D G3DSA:1.10.357.10 6 195 3.6E-26 T 14-10-2018 AMIS_24280 c9280ef941f14af0e14498c140015d82 486 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 66 219 7.2E-15 T 14-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like AMIS_25390 e49f8b8d293aca60f62c4cd00365a54b 143 SUPERFAMILY SSF55961 6 136 2.66E-26 T 14-10-2018 AMIS_25390 e49f8b8d293aca60f62c4cd00365a54b 143 Gene3D G3DSA:3.30.530.20 2 137 3.4E-37 T 14-10-2018 IPR023393 START-like domain superfamily AMIS_25390 e49f8b8d293aca60f62c4cd00365a54b 143 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 5 134 2.0E-7 T 14-10-2018 IPR019587 Polyketide cyclase/dehydrase AMIS_11550 0dded4ea6d149693c471bf2811c4623e 282 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 3 278 1.2E-82 T 14-10-2018 IPR003797 DegV AMIS_11550 0dded4ea6d149693c471bf2811c4623e 282 Pfam PF02645 Uncharacterised protein, DegV family COG1307 2 278 6.4E-76 T 14-10-2018 IPR003797 DegV AMIS_11550 0dded4ea6d149693c471bf2811c4623e 282 Gene3D G3DSA:3.40.50.10170 1 151 2.7E-43 T 14-10-2018 AMIS_11550 0dded4ea6d149693c471bf2811c4623e 282 Gene3D G3DSA:3.30.1180.10 154 281 6.7E-37 T 14-10-2018 AMIS_11550 0dded4ea6d149693c471bf2811c4623e 282 SUPERFAMILY SSF82549 1 280 1.46E-73 T 14-10-2018 AMIS_17410 4585f5526ed959a731f6dce06f46c892 180 Gene3D G3DSA:1.10.357.10 1 178 4.0E-28 T 14-10-2018 AMIS_17410 4585f5526ed959a731f6dce06f46c892 180 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 8.0E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_17410 4585f5526ed959a731f6dce06f46c892 180 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 8.0E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_17410 4585f5526ed959a731f6dce06f46c892 180 SUPERFAMILY SSF46689 4 72 1.59E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_17410 4585f5526ed959a731f6dce06f46c892 180 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 54 3.9E-17 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_16120 5390daa9a0b234553bff07ed3800ef4d 262 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 5 256 61.348 T 14-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_16120 5390daa9a0b234553bff07ed3800ef4d 262 Pfam PF00121 Triosephosphate isomerase 8 254 3.7E-90 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_16120 5390daa9a0b234553bff07ed3800ef4d 262 ProSitePatterns PS00171 Triosephosphate isomerase active site. 172 182 - T 14-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_16120 5390daa9a0b234553bff07ed3800ef4d 262 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 8 248 2.1E-60 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_16120 5390daa9a0b234553bff07ed3800ef4d 262 SUPERFAMILY SSF51351 4 256 1.57E-94 T 14-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMIS_16120 5390daa9a0b234553bff07ed3800ef4d 262 Gene3D G3DSA:3.20.20.70 1 258 6.9E-106 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_36220 ab1af450ee738916b3ec13c7befc6b78 114 Gene3D G3DSA:3.10.180.10 2 109 1.4E-13 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_36220 ab1af450ee738916b3ec13c7befc6b78 114 SUPERFAMILY SSF54593 2 105 1.65E-15 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_18690 f8c223e06aa30f7dde55f3122d10dec3 415 Pfam PF00128 Alpha amylase, catalytic domain 148 317 4.7E-22 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMIS_18690 f8c223e06aa30f7dde55f3122d10dec3 415 Pfam PF00128 Alpha amylase, catalytic domain 60 131 2.4E-21 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMIS_18690 f8c223e06aa30f7dde55f3122d10dec3 415 SUPERFAMILY SSF51445 3 363 3.88E-75 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_18690 f8c223e06aa30f7dde55f3122d10dec3 415 Gene3D G3DSA:3.20.20.80 1 146 2.1E-31 T 14-10-2018 AMIS_18690 f8c223e06aa30f7dde55f3122d10dec3 415 Gene3D G3DSA:3.20.20.80 152 364 3.2E-40 T 14-10-2018 AMIS_18690 f8c223e06aa30f7dde55f3122d10dec3 415 SMART SM00642 12 356 1.1E-46 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMIS_37930 7fe57ae9b3aa25e7ee6bb43737b74ba1 284 Gene3D G3DSA:3.90.25.10 140 268 1.6E-82 T 14-10-2018 AMIS_37930 7fe57ae9b3aa25e7ee6bb43737b74ba1 284 Pfam PF05368 NmrA-like family 4 220 3.3E-20 T 14-10-2018 IPR008030 NmrA-like domain Reactome: R-HSA-70635 AMIS_37930 7fe57ae9b3aa25e7ee6bb43737b74ba1 284 Gene3D G3DSA:3.40.50.720 5 267 1.6E-82 T 14-10-2018 AMIS_37930 7fe57ae9b3aa25e7ee6bb43737b74ba1 284 SUPERFAMILY SSF51735 3 253 3.48E-59 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_4400 2164724592cf6498ec5e9b0cee8ea57b 318 Gene3D G3DSA:2.160.20.10 17 317 3.1E-10 T 14-10-2018 IPR012334 Pectin lyase fold AMIS_4400 2164724592cf6498ec5e9b0cee8ea57b 318 SUPERFAMILY SSF51126 25 296 7.51E-16 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor AMIS_53490 19497b063517625184dadb3ea1b79713 119 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 78 19.04 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 AMIS_53490 19497b063517625184dadb3ea1b79713 119 Pfam PF15240 Proline-rich 10 107 4.6E-7 T 14-10-2018 IPR026086 Proline-rich protein AMIS_53490 19497b063517625184dadb3ea1b79713 119 Pfam PF02416 mttA/Hcf106 family 6 53 6.1E-17 T 14-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 AMIS_33390 93e4cc341e7f7c8b5f1955505e18fc88 274 Gene3D G3DSA:3.40.190.10 133 230 2.5E-64 T 14-10-2018 AMIS_33390 93e4cc341e7f7c8b5f1955505e18fc88 274 SUPERFAMILY SSF53850 11 271 4.18E-65 T 14-10-2018 AMIS_33390 93e4cc341e7f7c8b5f1955505e18fc88 274 SMART SM00062 46 271 5.2E-61 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMIS_33390 93e4cc341e7f7c8b5f1955505e18fc88 274 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 48 270 1.6E-61 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMIS_33390 93e4cc341e7f7c8b5f1955505e18fc88 274 Gene3D G3DSA:3.40.190.10 51 267 2.5E-64 T 14-10-2018 AMIS_33390 93e4cc341e7f7c8b5f1955505e18fc88 274 SMART SM00079 46 270 0.0098 T 14-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 AMIS_32560 7be399fa19ebd083eba377aed81c4191 106 Pfam PF03795 YCII-related domain 2 104 2.5E-5 T 14-10-2018 IPR005545 YCII-related AMIS_32560 7be399fa19ebd083eba377aed81c4191 106 SUPERFAMILY SSF54909 13 104 1.93E-8 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel AMIS_32560 7be399fa19ebd083eba377aed81c4191 106 Gene3D G3DSA:3.30.70.1060 1 106 3.5E-15 T 14-10-2018 AMIS_51040 a3fe3a086c506737f328233324a51102 461 Pfam PF02754 Cysteine-rich domain 344 428 4.1E-12 T 14-10-2018 IPR004017 Cysteine-rich domain AMIS_51040 a3fe3a086c506737f328233324a51102 461 Pfam PF02754 Cysteine-rich domain 215 298 5.5E-15 T 14-10-2018 IPR004017 Cysteine-rich domain AMIS_51040 a3fe3a086c506737f328233324a51102 461 SUPERFAMILY SSF54862 47 154 2.05E-20 T 14-10-2018 AMIS_51040 a3fe3a086c506737f328233324a51102 461 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMIS_51040 a3fe3a086c506737f328233324a51102 461 PIRSF PIRSF000139 34 455 4.0E-121 T 14-10-2018 AMIS_51040 a3fe3a086c506737f328233324a51102 461 Gene3D G3DSA:3.30.70.20 45 114 3.5E-8 T 14-10-2018 AMIS_51040 a3fe3a086c506737f328233324a51102 461 Pfam PF12838 4Fe-4S dicluster domain 49 113 1.6E-11 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMIS_69300 268fe99141ec1fc84d181f8e920c763c 204 Gene3D G3DSA:1.10.10.10 7 104 1.5E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_69300 268fe99141ec1fc84d181f8e920c763c 204 SUPERFAMILY SSF46785 7 179 1.1E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_75570 fc0348b38e3f597a623bae1cfb7c8b8a 174 Pfam PF06210 Protein of unknown function (DUF1003) 39 141 4.3E-41 T 14-10-2018 IPR010406 Protein of unknown function DUF1003 AMIS_60320 57a29bdb31825edee1ba37811ff4e9b4 119 SUPERFAMILY SSF54909 3 118 1.66E-27 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel AMIS_60320 57a29bdb31825edee1ba37811ff4e9b4 119 Gene3D G3DSA:3.30.70.1060 1 119 1.4E-37 T 14-10-2018 AMIS_60320 57a29bdb31825edee1ba37811ff4e9b4 119 Pfam PF03795 YCII-related domain 3 117 1.2E-16 T 14-10-2018 IPR005545 YCII-related AMIS_8940 c3e16642fd69941b87f0eb49e9f60d5d 196 Pfam PF14273 Domain of unknown function (DUF4360) 33 196 2.9E-37 T 14-10-2018 IPR025649 Protein of unknown function DUF4360 AMIS_42870 263db4f81070f73169709319ff0574a4 279 Pfam PF01734 Patatin-like phospholipase 5 193 8.7E-15 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 AMIS_42870 263db4f81070f73169709319ff0574a4 279 SUPERFAMILY SSF52151 3 212 3.14E-27 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMIS_42870 263db4f81070f73169709319ff0574a4 279 Gene3D G3DSA:3.40.1090.10 117 232 4.0E-9 T 14-10-2018 AMIS_42870 263db4f81070f73169709319ff0574a4 279 Gene3D G3DSA:3.40.1090.10 2 69 6.8E-11 T 14-10-2018 AMIS_7440 7b24daea805467d2cb75ae369cdf71f1 236 Pfam PF12730 ABC-2 family transporter protein 21 156 1.9E-11 T 14-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 AMIS_57380 38d6f1b277a15e78e8d09ef709c5614e 341 Pfam PF06030 Bacterial protein of unknown function (DUF916) 62 160 1.0E-7 T 14-10-2018 IPR010317 Protein of unknown function DUF916, cell surface putative AMIS_18380 d2f836c80a2e0b26d5c293c541ec09e7 92 SUPERFAMILY SSF52833 2 86 5.81E-27 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMIS_18380 d2f836c80a2e0b26d5c293c541ec09e7 92 TIGRFAM TIGR02174 CXXU_selWTH: selT/selW/selH selenoprotein domain 5 75 2.8E-19 T 14-10-2018 IPR011893 Selenoprotein, Rdx-type AMIS_18380 d2f836c80a2e0b26d5c293c541ec09e7 92 Gene3D G3DSA:3.40.30.10 1 92 4.6E-41 T 14-10-2018 AMIS_18380 d2f836c80a2e0b26d5c293c541ec09e7 92 Pfam PF10262 Rdx family 4 77 2.5E-31 T 14-10-2018 IPR011893 Selenoprotein, Rdx-type AMIS_75770 85c5bf3945857d51027e48a7fd205070 516 Pfam PF13406 Transglycosylase SLT domain 427 477 1.0E-7 T 14-10-2018 IPR031304 Transglycosylase SLT domain 2 AMIS_75770 85c5bf3945857d51027e48a7fd205070 516 SUPERFAMILY SSF53955 344 510 2.81E-31 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily AMIS_64860 db7d2b1641e2017733a2bdeb3f2a6891 289 Gene3D G3DSA:1.10.3720.10 3 281 5.5E-50 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_64860 db7d2b1641e2017733a2bdeb3f2a6891 289 SUPERFAMILY SSF161098 56 276 8.5E-47 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_64860 db7d2b1641e2017733a2bdeb3f2a6891 289 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 102 280 6.0E-11 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_51200 1a7b764e06dd84da9f30ca847fd96261 411 Gene3D G3DSA:3.40.50.1110 190 406 1.2E-29 T 14-10-2018 IPR036514 SGNH hydrolase superfamily AMIS_51200 1a7b764e06dd84da9f30ca847fd96261 411 SUPERFAMILY SSF52266 195 407 3.83E-37 T 14-10-2018 AMIS_51200 1a7b764e06dd84da9f30ca847fd96261 411 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 203 400 1.6E-20 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain AMIS_61190 d5c010d2cc8ec06d0adba6426291b39e 215 Hamap MF_00235 Adenylate kinase [adk]. 2 209 36.199 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AMIS_61190 d5c010d2cc8ec06d0adba6426291b39e 215 ProSitePatterns PS00113 Adenylate kinase signature. 82 93 - T 14-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AMIS_61190 d5c010d2cc8ec06d0adba6426291b39e 215 Pfam PF00406 Adenylate kinase 6 186 2.0E-39 T 14-10-2018 AMIS_61190 d5c010d2cc8ec06d0adba6426291b39e 215 TIGRFAM TIGR01351 adk: adenylate kinase 4 207 1.1E-62 T 14-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 AMIS_61190 d5c010d2cc8ec06d0adba6426291b39e 215 Pfam PF05191 Adenylate kinase, active site lid 123 158 1.7E-11 T 14-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 AMIS_61190 d5c010d2cc8ec06d0adba6426291b39e 215 Gene3D G3DSA:3.40.50.300 2 209 1.3E-69 T 14-10-2018 AMIS_61190 d5c010d2cc8ec06d0adba6426291b39e 215 PRINTS PR00094 Adenylate kinase signature 33 47 5.9E-23 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AMIS_61190 d5c010d2cc8ec06d0adba6426291b39e 215 PRINTS PR00094 Adenylate kinase signature 5 18 5.9E-23 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AMIS_61190 d5c010d2cc8ec06d0adba6426291b39e 215 PRINTS PR00094 Adenylate kinase signature 156 171 5.9E-23 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AMIS_61190 d5c010d2cc8ec06d0adba6426291b39e 215 PRINTS PR00094 Adenylate kinase signature 173 187 5.9E-23 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AMIS_61190 d5c010d2cc8ec06d0adba6426291b39e 215 PRINTS PR00094 Adenylate kinase signature 82 98 5.9E-23 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AMIS_61190 d5c010d2cc8ec06d0adba6426291b39e 215 SUPERFAMILY SSF52540 4 208 1.78E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_22050 d4a70d437b12e6078a8af421f67163e6 518 Pfam PF07730 Histidine kinase 162 225 8.4E-14 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMIS_22050 d4a70d437b12e6078a8af421f67163e6 518 Gene3D G3DSA:3.30.565.10 238 365 8.4E-24 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_22050 d4a70d437b12e6078a8af421f67163e6 518 SUPERFAMILY SSF55874 264 347 3.33E-9 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_50560 f83a02cbb1618a0e4cc97b7469d26ea0 397 Gene3D G3DSA:3.40.50.2000 223 381 5.5E-92 T 14-10-2018 AMIS_50560 f83a02cbb1618a0e4cc97b7469d26ea0 397 Pfam PF06722 Protein of unknown function (DUF1205) 204 284 4.8E-18 T 14-10-2018 IPR010610 Domain of unknown function DUF1205 AMIS_50560 f83a02cbb1618a0e4cc97b7469d26ea0 397 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 287 369 2.4E-4 T 14-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 AMIS_50560 f83a02cbb1618a0e4cc97b7469d26ea0 397 Gene3D G3DSA:3.40.50.2000 1 389 5.5E-92 T 14-10-2018 AMIS_50560 f83a02cbb1618a0e4cc97b7469d26ea0 397 SUPERFAMILY SSF53756 1 394 4.08E-62 T 14-10-2018 AMIS_11090 e0a3b4703fcf52b05e1a0cdbf2f0446a 305 Pfam PF07859 alpha/beta hydrolase fold 75 279 5.5E-67 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 AMIS_11090 e0a3b4703fcf52b05e1a0cdbf2f0446a 305 Gene3D G3DSA:3.40.50.1820 3 302 1.5E-78 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_11090 e0a3b4703fcf52b05e1a0cdbf2f0446a 305 SUPERFAMILY SSF53474 56 301 2.24E-61 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_16170 ce5c8079c257c0703ebc7cc3f2f28340 332 Pfam PF10128 Glucose-6-phosphate dehydrogenase subunit 56 298 1.7E-76 T 14-10-2018 IPR004555 Glucose-6-phosphate dehydrogenase assembly protein OpcA AMIS_69620 0f257a12ac87a41485f94d4c319e6c2c 97 Gene3D G3DSA:3.30.70.1120 1 96 5.4E-17 T 14-10-2018 IPR036746 TT1725-like superfamily AMIS_69620 0f257a12ac87a41485f94d4c319e6c2c 97 SUPERFAMILY SSF103007 5 94 2.88E-23 T 14-10-2018 IPR036746 TT1725-like superfamily AMIS_69620 0f257a12ac87a41485f94d4c319e6c2c 97 Pfam PF04456 Protein of unknown function (DUF503) 8 89 7.9E-25 T 14-10-2018 IPR007546 Protein of unknown function DUF503 AMIS_72080 97767fe17743b7c644c1675d10b07883 429 SUPERFAMILY SSF50998 69 314 4.45E-12 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AMIS_72080 97767fe17743b7c644c1675d10b07883 429 Gene3D G3DSA:2.130.10.10 49 361 4.3E-20 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_72080 97767fe17743b7c644c1675d10b07883 429 Pfam PF13360 PQQ-like domain 86 245 3.8E-6 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat AMIS_3150 bd79d778996f126a15c1f90cc4882c57 125 Pfam PF01740 STAS domain 11 101 1.8E-14 T 14-10-2018 IPR002645 STAS domain AMIS_3150 bd79d778996f126a15c1f90cc4882c57 125 Gene3D G3DSA:3.30.750.24 4 116 8.1E-25 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_3150 bd79d778996f126a15c1f90cc4882c57 125 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 10 102 6.5E-19 T 14-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 AMIS_3150 bd79d778996f126a15c1f90cc4882c57 125 SUPERFAMILY SSF52091 10 113 1.0E-20 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_79680 05995cec987a885222aa0c7387c6339b 274 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 62 238 1.5E-22 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain AMIS_79680 05995cec987a885222aa0c7387c6339b 274 Gene3D G3DSA:3.40.50.1110 58 247 3.9E-19 T 14-10-2018 IPR036514 SGNH hydrolase superfamily AMIS_79680 05995cec987a885222aa0c7387c6339b 274 SUPERFAMILY SSF52266 56 249 1.98E-27 T 14-10-2018 AMIS_33330 72f1150fb66a6c92492301a7364579b8 226 Pfam PF03167 Uracil DNA glycosylase superfamily 48 215 1.6E-25 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMIS_33330 72f1150fb66a6c92492301a7364579b8 226 Gene3D G3DSA:3.40.470.10 5 223 8.4E-59 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMIS_33330 72f1150fb66a6c92492301a7364579b8 226 SUPERFAMILY SSF52141 16 218 7.19E-36 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMIS_33330 72f1150fb66a6c92492301a7364579b8 226 SMART SM00986 48 214 6.9E-23 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMIS_33330 72f1150fb66a6c92492301a7364579b8 226 SMART SM00987 48 214 6.9E-23 T 14-10-2018 AMIS_4390 516b19211e3de55debb362af6c1f60c2 361 Pfam PF03752 Short repeats of unknown function 168 210 4.9E-10 T 14-10-2018 IPR005506 Protein of unknown function DUF312 AMIS_60250 8a3e289be88026cdbb56bfc671dc94f5 935 SUPERFAMILY SSF52540 86 311 2.3E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_60250 8a3e289be88026cdbb56bfc671dc94f5 935 Gene3D G3DSA:3.40.50.10810 109 416 1.8E-55 T 14-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily AMIS_60250 8a3e289be88026cdbb56bfc671dc94f5 935 Pfam PF00176 SNF2 family N-terminal domain 131 298 4.9E-11 T 14-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 AMIS_60250 8a3e289be88026cdbb56bfc671dc94f5 935 SMART SM00490 455 543 1.7E-9 T 14-10-2018 IPR001650 Helicase, C-terminal AMIS_60250 8a3e289be88026cdbb56bfc671dc94f5 935 Pfam PF00271 Helicase conserved C-terminal domain 442 543 9.5E-13 T 14-10-2018 IPR001650 Helicase, C-terminal AMIS_60250 8a3e289be88026cdbb56bfc671dc94f5 935 SMART SM00487 107 307 4.6E-14 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMIS_60250 8a3e289be88026cdbb56bfc671dc94f5 935 Gene3D G3DSA:3.40.50.300 417 580 5.6E-26 T 14-10-2018 AMIS_60250 8a3e289be88026cdbb56bfc671dc94f5 935 SUPERFAMILY SSF52540 232 563 3.45E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_12590 3b0e7bcd002451aaa547dd0f81ab88f8 129 SUPERFAMILY SSF82607 35 98 4.84E-5 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily AMIS_12590 3b0e7bcd002451aaa547dd0f81ab88f8 129 Pfam PF02575 YbaB/EbfC DNA-binding family 32 100 9.8E-6 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AMIS_55790 0f3709cdeb5716291b80a67fef0bc5cd 204 SUPERFAMILY SSF46689 8 79 3.07E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_55790 0f3709cdeb5716291b80a67fef0bc5cd 204 Gene3D G3DSA:1.10.357.10 59 199 8.9E-26 T 14-10-2018 AMIS_55790 0f3709cdeb5716291b80a67fef0bc5cd 204 SUPERFAMILY SSF48498 87 195 1.84E-12 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_55790 0f3709cdeb5716291b80a67fef0bc5cd 204 Gene3D G3DSA:1.10.10.60 13 58 1.0E-21 T 14-10-2018 AMIS_55790 0f3709cdeb5716291b80a67fef0bc5cd 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 65 1.3E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_24950 0c975c87c5e2c779c8032e24f44248ce 436 SUPERFAMILY SSF52518 3 175 6.38E-41 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold AMIS_24950 0c975c87c5e2c779c8032e24f44248ce 436 SUPERFAMILY SSF52467 151 321 5.2E-30 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AMIS_24950 0c975c87c5e2c779c8032e24f44248ce 436 Gene3D G3DSA:3.40.50.970 1 179 6.7E-43 T 14-10-2018 AMIS_24950 0c975c87c5e2c779c8032e24f44248ce 436 Gene3D G3DSA:3.40.50.1220 180 326 2.3E-32 T 14-10-2018 AMIS_24950 0c975c87c5e2c779c8032e24f44248ce 436 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 3 164 4.0E-43 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AMIS_24950 0c975c87c5e2c779c8032e24f44248ce 436 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 186 313 1.9E-21 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AMIS_24860 eb287a93733c7704ddae8cca52fae453 148 Pfam PF12158 Protein of unknown function (DUF3592) 11 129 8.0E-7 T 14-10-2018 IPR021994 Protein of unknown function DUF3592 AMIS_57200 88d7848ae3d3d6f36d28ad37b79b3859 384 Pfam PF01494 FAD binding domain 4 308 1.2E-47 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 AMIS_57200 88d7848ae3d3d6f36d28ad37b79b3859 384 Gene3D G3DSA:3.30.70.2450 179 261 1.2E-73 T 14-10-2018 AMIS_57200 88d7848ae3d3d6f36d28ad37b79b3859 384 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 272 287 9.3E-27 T 14-10-2018 AMIS_57200 88d7848ae3d3d6f36d28ad37b79b3859 384 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 150 165 9.3E-27 T 14-10-2018 AMIS_57200 88d7848ae3d3d6f36d28ad37b79b3859 384 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 287 303 9.3E-27 T 14-10-2018 AMIS_57200 88d7848ae3d3d6f36d28ad37b79b3859 384 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 3 25 9.3E-27 T 14-10-2018 AMIS_57200 88d7848ae3d3d6f36d28ad37b79b3859 384 Gene3D G3DSA:3.50.50.60 4 318 1.2E-73 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_57200 88d7848ae3d3d6f36d28ad37b79b3859 384 SUPERFAMILY SSF51905 3 350 2.53E-54 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_19270 0d596b818f81f10b2e1b4fea5454c2c4 500 SUPERFAMILY SSF56801 4 498 1.83E-140 T 14-10-2018 AMIS_19270 0d596b818f81f10b2e1b4fea5454c2c4 500 Pfam PF00501 AMP-binding enzyme 10 405 3.8E-93 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMIS_19270 0d596b818f81f10b2e1b4fea5454c2c4 500 Gene3D G3DSA:3.30.300.310 403 500 8.0E-31 T 14-10-2018 AMIS_19270 0d596b818f81f10b2e1b4fea5454c2c4 500 Pfam PF13193 AMP-binding enzyme C-terminal domain 415 490 7.8E-19 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AMIS_19270 0d596b818f81f10b2e1b4fea5454c2c4 500 ProSitePatterns PS00455 Putative AMP-binding domain signature. 167 178 - T 14-10-2018 IPR020845 AMP-binding, conserved site AMIS_19270 0d596b818f81f10b2e1b4fea5454c2c4 500 Gene3D G3DSA:3.40.50.12780 2 402 6.0E-109 T 14-10-2018 AMIS_67440 a8ba97bc89b13e68e8258632a0e0e84c 240 SUPERFAMILY SSF51735 1 201 2.44E-29 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_67440 a8ba97bc89b13e68e8258632a0e0e84c 240 Gene3D G3DSA:3.40.50.720 2 238 5.1E-29 T 14-10-2018 AMIS_67440 a8ba97bc89b13e68e8258632a0e0e84c 240 Pfam PF13460 NAD(P)H-binding 7 174 3.2E-14 T 14-10-2018 IPR016040 NAD(P)-binding domain AMIS_37360 10358eb1be47170389e91ac03fde2310 254 TIGRFAM TIGR02454 ECF_T_CbiQ: cobalt ECF transporter T component CbiQ 21 214 3.0E-40 T 14-10-2018 IPR012809 Cobalt ECF transporter T component CbiQ GO:0005887|GO:0006824|GO:0043190 AMIS_37360 10358eb1be47170389e91ac03fde2310 254 Pfam PF02361 Cobalt transport protein 15 218 6.3E-35 T 14-10-2018 IPR003339 ABC/ECF transporter, transmembrane component AMIS_14650 d3af99ddf8dccdad310e4c4913012937 300 SUPERFAMILY SSF52540 3 152 4.65E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_14650 d3af99ddf8dccdad310e4c4913012937 300 Gene3D G3DSA:3.40.50.300 3 172 5.5E-19 T 14-10-2018 AMIS_76980 c1a7c3013772ba4361a9eb265e36bc69 418 Pfam PF01594 AI-2E family transporter 68 387 5.6E-63 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like AMIS_76980 c1a7c3013772ba4361a9eb265e36bc69 418 PRINTS PR01988 Putative bacilysin exporter bacE signature 64 82 7.2E-6 T 14-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 AMIS_76980 c1a7c3013772ba4361a9eb265e36bc69 418 PRINTS PR01988 Putative bacilysin exporter bacE signature 129 150 7.2E-6 T 14-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 AMIS_76980 c1a7c3013772ba4361a9eb265e36bc69 418 PRINTS PR01988 Putative bacilysin exporter bacE signature 359 382 7.2E-6 T 14-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 AMIS_76980 c1a7c3013772ba4361a9eb265e36bc69 418 PRINTS PR01988 Putative bacilysin exporter bacE signature 294 317 7.2E-6 T 14-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 AMIS_78810 25e86b02af77e144c1143632e61a0b17 201 SUPERFAMILY SSF46689 9 83 8.72E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_78810 25e86b02af77e144c1143632e61a0b17 201 Gene3D G3DSA:1.10.357.10 60 196 2.4E-27 T 14-10-2018 AMIS_78810 25e86b02af77e144c1143632e61a0b17 201 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 63 5.7E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_78810 25e86b02af77e144c1143632e61a0b17 201 ProSitePatterns PS01081 TetR-type HTH domain signature. 34 65 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMIS_78810 25e86b02af77e144c1143632e61a0b17 201 Gene3D G3DSA:1.10.10.60 9 58 5.8E-21 T 14-10-2018 AMIS_32040 c92cd903e83a2e4917397ee43f573260 552 Gene3D G3DSA:3.10.105.10 308 526 1.6E-117 T 14-10-2018 AMIS_32040 c92cd903e83a2e4917397ee43f573260 552 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 83 468 8.9E-74 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain AMIS_32040 c92cd903e83a2e4917397ee43f573260 552 SUPERFAMILY SSF53850 38 550 4.34E-106 T 14-10-2018 AMIS_32040 c92cd903e83a2e4917397ee43f573260 552 Gene3D G3DSA:3.90.76.10 55 226 1.6E-117 T 14-10-2018 AMIS_32040 c92cd903e83a2e4917397ee43f573260 552 Gene3D G3DSA:3.40.190.10 227 539 1.6E-117 T 14-10-2018 AMIS_32040 c92cd903e83a2e4917397ee43f573260 552 PIRSF PIRSF002741 2 552 3.2E-80 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AMIS_53090 1b6d4f9b403783228559e3d77cdcf989 945 SUPERFAMILY SSF52540 294 458 6.31E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_53090 1b6d4f9b403783228559e3d77cdcf989 945 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 299 452 2.7E-5 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMIS_30360 84ddf3efe8a728e9b1a9431827437c2c 391 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 333 342 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 AMIS_30360 84ddf3efe8a728e9b1a9431827437c2c 391 Gene3D G3DSA:1.10.630.10 2 391 1.0E-108 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_30360 84ddf3efe8a728e9b1a9431827437c2c 391 PRINTS PR00359 B-class P450 signature 144 159 2.1E-52 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_30360 84ddf3efe8a728e9b1a9431827437c2c 391 PRINTS PR00359 B-class P450 signature 127 143 2.1E-52 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_30360 84ddf3efe8a728e9b1a9431827437c2c 391 PRINTS PR00359 B-class P450 signature 340 351 2.1E-52 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_30360 84ddf3efe8a728e9b1a9431827437c2c 391 PRINTS PR00359 B-class P450 signature 264 275 2.1E-52 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_30360 84ddf3efe8a728e9b1a9431827437c2c 391 PRINTS PR00359 B-class P450 signature 181 203 2.1E-52 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_30360 84ddf3efe8a728e9b1a9431827437c2c 391 PRINTS PR00359 B-class P450 signature 80 91 2.1E-52 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_30360 84ddf3efe8a728e9b1a9431827437c2c 391 PRINTS PR00359 B-class P450 signature 282 309 2.1E-52 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_30360 84ddf3efe8a728e9b1a9431827437c2c 391 PRINTS PR00359 B-class P450 signature 331 340 2.1E-52 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_30360 84ddf3efe8a728e9b1a9431827437c2c 391 PRINTS PR00359 B-class P450 signature 310 325 2.1E-52 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_30360 84ddf3efe8a728e9b1a9431827437c2c 391 SUPERFAMILY SSF48264 17 391 1.06E-81 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_30360 84ddf3efe8a728e9b1a9431827437c2c 391 PRINTS PR00385 P450 superfamily signature 331 340 5.5E-5 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_30360 84ddf3efe8a728e9b1a9431827437c2c 391 PRINTS PR00385 P450 superfamily signature 340 351 5.5E-5 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_30360 84ddf3efe8a728e9b1a9431827437c2c 391 PRINTS PR00385 P450 superfamily signature 226 243 5.5E-5 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_30360 84ddf3efe8a728e9b1a9431827437c2c 391 Pfam PF00067 Cytochrome P450 196 358 6.5E-23 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_3590 4a2362f7e34db2205aaf6f75339b5591 481 Gene3D G3DSA:2.60.40.10 392 479 4.2E-14 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_3590 4a2362f7e34db2205aaf6f75339b5591 481 Pfam PF12245 Bacterial Ig-like domain (group 3) 196 208 1.4 T 14-10-2018 IPR022038 Bacterial Ig-like domain AMIS_3590 4a2362f7e34db2205aaf6f75339b5591 481 Pfam PF12245 Bacterial Ig-like domain (group 3) 459 476 0.16 T 14-10-2018 IPR022038 Bacterial Ig-like domain AMIS_3590 4a2362f7e34db2205aaf6f75339b5591 481 Pfam PF12245 Bacterial Ig-like domain (group 3) 110 130 1.3 T 14-10-2018 IPR022038 Bacterial Ig-like domain AMIS_38710 a3b1dcaf612f8f8cacf48b1a0acafb64 323 SUPERFAMILY SSF53474 40 187 8.66E-13 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_38710 a3b1dcaf612f8f8cacf48b1a0acafb64 323 Gene3D G3DSA:3.40.50.1820 40 298 1.0E-12 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_26000 ea797660718fd1485dbf391e9cef203d 529 Pfam PF01186 Lysyl oxidase 364 508 6.7E-15 T 14-10-2018 IPR001695 Lysyl oxidase GO:0005507|GO:0016641|GO:0055114 Reactome: R-HSA-1566948|Reactome: R-HSA-2243919 AMIS_49220 5a2e82a9220455da60a31195bf29a860 441 Pfam PF04434 SWIM zinc finger 402 430 5.1E-7 T 14-10-2018 IPR007527 Zinc finger, SWIM-type GO:0008270 AMIS_3500 b0c798279b8d315b88141c085664726b 64 Pfam PF04149 Domain of unknown function (DUF397) 8 57 2.1E-20 T 14-10-2018 IPR007278 Domain of unknown function DUF397 AMIS_27490 3f7db9efb74128b78de3591b7ebcfcca 153 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 20 152 1.6E-14 T 14-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like AMIS_27490 3f7db9efb74128b78de3591b7ebcfcca 153 Gene3D G3DSA:3.30.530.20 2 153 6.5E-30 T 14-10-2018 IPR023393 START-like domain superfamily AMIS_27490 3f7db9efb74128b78de3591b7ebcfcca 153 SUPERFAMILY SSF55961 11 153 1.19E-23 T 14-10-2018 AMIS_78490 52d7aa7050b75908a563e3199d3a5c19 335 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 142 335 2.6E-26 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_78490 52d7aa7050b75908a563e3199d3a5c19 335 SUPERFAMILY SSF161098 119 317 2.09E-28 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_78490 52d7aa7050b75908a563e3199d3a5c19 335 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 36 71 4.9E-11 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AMIS_78490 52d7aa7050b75908a563e3199d3a5c19 335 Gene3D G3DSA:1.10.3720.10 112 332 2.1E-25 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_16160 4ddf9e254698fe873c08e7001dc62098 239 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 11 228 1.7E-66 T 14-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 AMIS_16160 4ddf9e254698fe873c08e7001dc62098 239 SUPERFAMILY SSF100950 6 238 4.66E-57 T 14-10-2018 IPR037171 NagB/RpiA transferase-like AMIS_16160 4ddf9e254698fe873c08e7001dc62098 239 Gene3D G3DSA:3.40.50.1360 1 238 1.6E-75 T 14-10-2018 AMIS_16160 4ddf9e254698fe873c08e7001dc62098 239 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 10 237 1.7E-59 T 14-10-2018 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 AMIS_80360 f03fc0f88799bb51ae0f673612e0f2a9 380 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 133 286 5.1E-45 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain AMIS_80360 f03fc0f88799bb51ae0f673612e0f2a9 380 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 133 286 8.7E-44 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain AMIS_80360 f03fc0f88799bb51ae0f673612e0f2a9 380 Gene3D G3DSA:1.10.260.150 96 378 4.2E-80 T 14-10-2018 AMIS_49390 7cbe54afa96835b632792b39585e8e31 409 Pfam PF02653 Branched-chain amino acid transport system / permease component 65 398 5.2E-35 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 AMIS_38870 0d4628c45bcdaf6db7ab71b271a880be 264 PIRSF PIRSF017393 2 264 2.9E-96 T 14-10-2018 IPR006764 S-adenosyl-L-methionine dependent methyltransferase, SAV2177 type AMIS_38870 0d4628c45bcdaf6db7ab71b271a880be 264 SUPERFAMILY SSF53335 12 244 1.5E-44 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_38870 0d4628c45bcdaf6db7ab71b271a880be 264 Pfam PF04672 S-adenosyl methyltransferase 4 264 1.7E-99 T 14-10-2018 IPR006764 S-adenosyl-L-methionine dependent methyltransferase, SAV2177 type AMIS_38870 0d4628c45bcdaf6db7ab71b271a880be 264 Gene3D G3DSA:3.40.50.150 1 264 5.4E-105 T 14-10-2018 AMIS_45310 def7931d3cb33bb07878de30027e862b 253 Pfam PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) 10 228 1.0E-52 T 14-10-2018 IPR019108 Cytochrome c oxidase caa3-type, assembly factor CtaG-related AMIS_31480 45a2464f4f9cf0b7bc49bd9f6efe79fb 325 Pfam PF06626 Protein of unknown function (DUF1152) 28 308 8.5E-18 T 14-10-2018 IPR010581 Protein of unknown function DUF1152 AMIS_3730 73e805d43985a0b26db0463d939db90c 672 SUPERFAMILY SSF51556 251 522 3.37E-20 T 14-10-2018 IPR032466 Metal-dependent hydrolase AMIS_3730 73e805d43985a0b26db0463d939db90c 672 Gene3D G3DSA:3.20.20.140 277 416 1.4E-5 T 14-10-2018 AMIS_71730 5b375e5f25a50d789933a5d95dbf096d 260 Gene3D G3DSA:3.40.50.1820 13 224 7.4E-32 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_71730 5b375e5f25a50d789933a5d95dbf096d 260 SUPERFAMILY SSF53474 12 221 1.56E-33 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_44290 de0d71829a84551fb6ff5efd94c45417 189 SUPERFAMILY SSF46689 17 73 1.33E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_44290 de0d71829a84551fb6ff5efd94c45417 189 Gene3D G3DSA:1.10.357.10 7 188 3.3E-7 T 14-10-2018 AMIS_9590 4c70669d7044c1167d4f4bdab59379d9 198 SUPERFAMILY SSF48498 82 196 1.11E-16 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_9590 4c70669d7044c1167d4f4bdab59379d9 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 57 3.0E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_9590 4c70669d7044c1167d4f4bdab59379d9 198 SUPERFAMILY SSF46689 4 74 2.05E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_9590 4c70669d7044c1167d4f4bdab59379d9 198 Gene3D G3DSA:1.10.357.10 5 198 2.7E-39 T 14-10-2018 AMIS_9590 4c70669d7044c1167d4f4bdab59379d9 198 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 82 194 1.2E-13 T 14-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal AMIS_63310 ff00d039721ac1fc70a31d325e3e7d4f 689 Gene3D G3DSA:2.120.10.30 66 482 1.1E-48 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AMIS_63310 ff00d039721ac1fc70a31d325e3e7d4f 689 Pfam PF07995 Glucose / Sorbosone dehydrogenase 123 439 1.2E-25 T 14-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase AMIS_63310 ff00d039721ac1fc70a31d325e3e7d4f 689 SUPERFAMILY SSF50952 116 415 1.18E-9 T 14-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 AMIS_63310 ff00d039721ac1fc70a31d325e3e7d4f 689 Gene3D G3DSA:2.60.120.560 499 682 4.6E-14 T 14-10-2018 AMIS_17610 9c44c004b67f3c5c24626c45d7763b1a 192 SUPERFAMILY SSF52540 27 184 5.05E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_17610 9c44c004b67f3c5c24626c45d7763b1a 192 Gene3D G3DSA:3.40.50.300 8 184 4.7E-29 T 14-10-2018 AMIS_53550 4537de192a64f0681987592b75c83be2 215 Gene3D G3DSA:3.40.50.150 1 214 7.1E-68 T 14-10-2018 AMIS_53550 4537de192a64f0681987592b75c83be2 215 Pfam PF01596 O-methyltransferase 22 213 3.8E-50 T 14-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 AMIS_53550 4537de192a64f0681987592b75c83be2 215 SUPERFAMILY SSF53335 4 214 9.24E-45 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_16740 048011800ed96b9e7867907d43c9a66f 135 SUPERFAMILY SSF55811 8 113 1.76E-25 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMIS_16740 048011800ed96b9e7867907d43c9a66f 135 ProSitePatterns PS00893 Nudix box signature. 36 57 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMIS_16740 048011800ed96b9e7867907d43c9a66f 135 Pfam PF00293 NUDIX domain 9 113 2.1E-17 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMIS_16740 048011800ed96b9e7867907d43c9a66f 135 Gene3D G3DSA:3.90.79.10 5 132 9.6E-26 T 14-10-2018 AMIS_16740 048011800ed96b9e7867907d43c9a66f 135 PRINTS PR00502 NUDIX hydrolase family signature 31 45 6.1E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AMIS_16740 048011800ed96b9e7867907d43c9a66f 135 PRINTS PR00502 NUDIX hydrolase family signature 45 60 6.1E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AMIS_16530 cc6f62246e580ccaebc58e85da31892a 135 SUPERFAMILY SSF54427 3 132 7.85E-5 T 14-10-2018 IPR032710 NTF2-like domain superfamily AMIS_70170 0a31d1b2befedf0f897ed21cd85a74a9 218 Pfam PF01551 Peptidase family M23 110 204 1.5E-15 T 14-10-2018 IPR016047 Peptidase M23 AMIS_70170 0a31d1b2befedf0f897ed21cd85a74a9 218 SUPERFAMILY SSF51261 85 208 3.92E-18 T 14-10-2018 IPR011055 Duplicated hybrid motif AMIS_70170 0a31d1b2befedf0f897ed21cd85a74a9 218 Gene3D G3DSA:2.70.70.10 79 209 1.2E-20 T 14-10-2018 IPR011055 Duplicated hybrid motif AMIS_53120 5135f764529fe3e7c64b2bebc10cbbc7 463 SUPERFAMILY SSF52540 11 434 2.65E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_53120 5135f764529fe3e7c64b2bebc10cbbc7 463 Gene3D G3DSA:3.40.50.300 235 440 1.6E-19 T 14-10-2018 AMIS_53120 5135f764529fe3e7c64b2bebc10cbbc7 463 Pfam PF12696 TraM recognition site of TraD and TraG 318 395 6.2E-10 T 14-10-2018 IPR032689 TraD/TraG, TraM recognition site AMIS_25320 869190e0751cc4b55babe748adb7bb91 198 Gene3D G3DSA:3.40.50.360 2 191 1.7E-52 T 14-10-2018 IPR029039 Flavoprotein-like superfamily AMIS_25320 869190e0751cc4b55babe748adb7bb91 198 SUPERFAMILY SSF52218 4 187 4.72E-43 T 14-10-2018 IPR029039 Flavoprotein-like superfamily AMIS_25320 869190e0751cc4b55babe748adb7bb91 198 Pfam PF03358 NADPH-dependent FMN reductase 46 123 6.1E-10 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AMIS_16950 146ac2c5ab2c75079fffbe8f4fa52f7c 285 Gene3D G3DSA:1.10.3720.10 8 275 1.3E-60 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_16950 146ac2c5ab2c75079fffbe8f4fa52f7c 285 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 277 9.6E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_16950 146ac2c5ab2c75079fffbe8f4fa52f7c 285 SUPERFAMILY SSF161098 13 285 7.2E-70 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_10580 b4c6cf8562bb6013d2318874d418012f 228 SUPERFAMILY SSF55781 29 163 1.25E-16 T 14-10-2018 AMIS_10580 b4c6cf8562bb6013d2318874d418012f 228 SMART SM01012 164 219 7.5E-8 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 AMIS_10580 b4c6cf8562bb6013d2318874d418012f 228 Pfam PF03861 ANTAR domain 169 219 4.5E-11 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 AMIS_10580 b4c6cf8562bb6013d2318874d418012f 228 Pfam PF13185 GAF domain 26 161 2.1E-8 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_10580 b4c6cf8562bb6013d2318874d418012f 228 Gene3D G3DSA:3.30.450.40 9 174 1.2E-18 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_77470 a81dbe308a93d57ef77311081195e5af 384 Pfam PF13360 PQQ-like domain 96 216 5.4E-10 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat AMIS_77470 a81dbe308a93d57ef77311081195e5af 384 SUPERFAMILY SSF50998 43 340 5.49E-16 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AMIS_77470 a81dbe308a93d57ef77311081195e5af 384 Gene3D G3DSA:2.130.10.10 43 365 1.0E-13 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_38600 69f26a73add5027e5115fc375321f3ad 243 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 170 240 3.5E-18 T 14-10-2018 IPR000160 GGDEF domain AMIS_38600 69f26a73add5027e5115fc375321f3ad 243 SUPERFAMILY SSF55073 178 239 1.57E-17 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_38600 69f26a73add5027e5115fc375321f3ad 243 Pfam PF00990 Diguanylate cyclase, GGDEF domain 174 238 1.1E-17 T 14-10-2018 IPR000160 GGDEF domain AMIS_38600 69f26a73add5027e5115fc375321f3ad 243 Gene3D G3DSA:3.30.70.270 163 243 2.0E-24 T 14-10-2018 AMIS_24930 1a5e3cbaefd7352ec2b0c770d59ce23b 148 Gene3D G3DSA:3.30.530.20 2 147 5.8E-27 T 14-10-2018 IPR023393 START-like domain superfamily AMIS_24930 1a5e3cbaefd7352ec2b0c770d59ce23b 148 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 5 144 1.6E-11 T 14-10-2018 IPR019587 Polyketide cyclase/dehydrase AMIS_24930 1a5e3cbaefd7352ec2b0c770d59ce23b 148 SUPERFAMILY SSF55961 2 144 1.14E-22 T 14-10-2018 AMIS_9820 2ac27648c2128e8af7192eac9a05fc15 232 Pfam PF13828 Domain of unknown function (DUF4190) 151 214 2.4E-15 T 14-10-2018 IPR025241 Domain of unknown function DUF4190 AMIS_33740 2e7cddfc5cf349893922859a90855a0e 359 Pfam PF00155 Aminotransferase class I and II 49 353 1.5E-31 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMIS_33740 2e7cddfc5cf349893922859a90855a0e 359 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 211 224 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 AMIS_33740 2e7cddfc5cf349893922859a90855a0e 359 Gene3D G3DSA:3.90.1150.10 19 351 2.7E-73 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMIS_33740 2e7cddfc5cf349893922859a90855a0e 359 Gene3D G3DSA:3.40.640.10 49 264 2.7E-73 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_33740 2e7cddfc5cf349893922859a90855a0e 359 SUPERFAMILY SSF53383 47 356 1.2E-67 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_15500 704e4b0b40b688a76bc1c0eeee4cb531 253 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 3 253 9.5E-108 T 14-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 AMIS_15500 704e4b0b40b688a76bc1c0eeee4cb531 253 Gene3D G3DSA:3.20.20.70 1 253 2.6E-100 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_15500 704e4b0b40b688a76bc1c0eeee4cb531 253 Pfam PF00977 Histidine biosynthesis protein 6 237 1.4E-83 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 AMIS_15500 704e4b0b40b688a76bc1c0eeee4cb531 253 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 2 253 47.28 T 14-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 AMIS_15500 704e4b0b40b688a76bc1c0eeee4cb531 253 SUPERFAMILY SSF51366 4 253 1.33E-78 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AMIS_69830 88340c61d8893c09599656d999497537 315 SMART SM00382 47 229 4.3E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_69830 88340c61d8893c09599656d999497537 315 Gene3D G3DSA:3.40.50.300 20 250 8.6E-64 T 14-10-2018 AMIS_69830 88340c61d8893c09599656d999497537 315 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_69830 88340c61d8893c09599656d999497537 315 Pfam PF13732 Domain of unknown function (DUF4162) 232 313 4.1E-13 T 14-10-2018 IPR025302 Domain of unknown function DUF4162 AMIS_69830 88340c61d8893c09599656d999497537 315 Pfam PF00005 ABC transporter 38 178 1.1E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_69830 88340c61d8893c09599656d999497537 315 SUPERFAMILY SSF52540 22 241 3.22E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_79090 b380222f77de101f0ad5da01b5fa7868 116 SUPERFAMILY SSF46785 5 86 1.13E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_79090 b380222f77de101f0ad5da01b5fa7868 116 Gene3D G3DSA:1.10.10.10 4 94 1.8E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_79090 b380222f77de101f0ad5da01b5fa7868 116 SMART SM00418 11 89 4.0E-21 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_79090 b380222f77de101f0ad5da01b5fa7868 116 Pfam PF01022 Bacterial regulatory protein, arsR family 18 64 5.2E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_79090 b380222f77de101f0ad5da01b5fa7868 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 13 28 6.8E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_79090 b380222f77de101f0ad5da01b5fa7868 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 6.8E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_79090 b380222f77de101f0ad5da01b5fa7868 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 6.8E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_25210 2b143e3da0d78d1e9554d0384eb0402a 139 Gene3D G3DSA:1.20.1250.20 6 130 4.0E-8 T 14-10-2018 AMIS_25210 2b143e3da0d78d1e9554d0384eb0402a 139 SUPERFAMILY SSF103473 6 127 5.36E-10 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_50430 fb51d6999f63a5d77e1cdd8799e02bd9 422 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 160 176 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site AMIS_50430 fb51d6999f63a5d77e1cdd8799e02bd9 422 SMART SM00825 Beta-ketoacyl synthase 5 408 1.5E-11 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMIS_50430 fb51d6999f63a5d77e1cdd8799e02bd9 422 Gene3D G3DSA:3.40.47.10 1 260 8.2E-70 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_50430 fb51d6999f63a5d77e1cdd8799e02bd9 422 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 6 252 3.2E-47 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AMIS_50430 fb51d6999f63a5d77e1cdd8799e02bd9 422 SUPERFAMILY SSF53901 6 416 4.45E-63 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_50430 fb51d6999f63a5d77e1cdd8799e02bd9 422 Gene3D G3DSA:3.40.47.10 264 421 3.5E-47 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_50430 fb51d6999f63a5d77e1cdd8799e02bd9 422 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 260 374 2.6E-32 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal AMIS_6190 e0b5899caa0bce4537545e6d5ce30c27 131 SUPERFAMILY SSF53137 21 129 1.44E-44 T 14-10-2018 AMIS_6190 e0b5899caa0bce4537545e6d5ce30c27 131 Gene3D G3DSA:3.30.420.100 16 131 1.6E-39 T 14-10-2018 AMIS_6190 e0b5899caa0bce4537545e6d5ce30c27 131 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 17 131 26.646 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_6190 e0b5899caa0bce4537545e6d5ce30c27 131 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 18 131 3.3E-46 T 14-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_6190 e0b5899caa0bce4537545e6d5ce30c27 131 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 22 131 1.1E-37 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_61620 06f0b8d0cdb965cdf20ef5a0cd0cd216 224 Pfam PF01638 HxlR-like helix-turn-helix 17 101 2.4E-24 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type AMIS_61620 06f0b8d0cdb965cdf20ef5a0cd0cd216 224 SUPERFAMILY SSF46785 5 107 1.84E-30 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_61620 06f0b8d0cdb965cdf20ef5a0cd0cd216 224 SUPERFAMILY SSF55718 113 216 4.47E-7 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily AMIS_61620 06f0b8d0cdb965cdf20ef5a0cd0cd216 224 Gene3D G3DSA:1.10.10.10 4 132 7.4E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_17810 65430c4000651293c3cf00f254b96dfc 360 Pfam PF01594 AI-2E family transporter 14 325 1.1E-44 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like AMIS_54300 a0c975ccf3266650bd860acc66b44fb6 199 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 23 199 5.7E-59 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 AMIS_54300 a0c975ccf3266650bd860acc66b44fb6 199 PIRSF PIRSF015617 2 199 1.1E-63 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 AMIS_54300 a0c975ccf3266650bd860acc66b44fb6 199 Gene3D G3DSA:3.40.50.300 5 199 1.1E-59 T 14-10-2018 AMIS_54300 a0c975ccf3266650bd860acc66b44fb6 199 SUPERFAMILY SSF52540 12 199 2.3E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_54300 a0c975ccf3266650bd860acc66b44fb6 199 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 19 199 8.5E-69 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 AMIS_31470 f17aa8203ad9dd0ce11257543543e10a 558 Pfam PF07510 Protein of unknown function (DUF1524) 415 549 3.7E-25 T 14-10-2018 IPR011089 Domain of unknown function DUF1524 AMIS_31470 f17aa8203ad9dd0ce11257543543e10a 558 Pfam PF03235 Protein of unknown function DUF262 14 230 3.7E-35 T 14-10-2018 IPR004919 Domain of unknown function DUF262 AMIS_31240 1d6f48983577b60662edfce407074c08 679 Gene3D G3DSA:3.40.50.300 21 87 4.6E-8 T 14-10-2018 AMIS_31240 1d6f48983577b60662edfce407074c08 679 SUPERFAMILY SSF52540 26 208 3.04E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_4570 f4d758cd7d3563d0845c3608176509ad 395 SUPERFAMILY SSF50998 17 265 2.35E-10 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AMIS_4570 f4d758cd7d3563d0845c3608176509ad 395 Gene3D G3DSA:2.130.10.10 13 361 2.0E-8 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_4570 f4d758cd7d3563d0845c3608176509ad 395 Pfam PF17164 Domain of unknown function (DUF5122) beta-propeller 88 119 3.0E-4 T 14-10-2018 IPR013431 Delta-60 repeat AMIS_53610 d353e1cd0329c4e27d11c5a63640f61b 505 PIRSF PIRSF018077 10 502 2.1E-202 T 14-10-2018 IPR004347 Pup ligase/deamidase GO:0010498|GO:0019941 MetaCyc: PWY-7893 AMIS_53610 d353e1cd0329c4e27d11c5a63640f61b 505 Pfam PF03136 Pup-ligase protein 5 460 1.6E-187 T 14-10-2018 IPR004347 Pup ligase/deamidase GO:0010498|GO:0019941 MetaCyc: PWY-7893 AMIS_53610 d353e1cd0329c4e27d11c5a63640f61b 505 TIGRFAM TIGR03688 pupylate_PafA2: proteasome accessory factor PafA2 4 492 8.9E-226 T 14-10-2018 IPR022366 Pup deamidase GO:0008233|GO:0016811 AMIS_32480 fb8a8dac934d2514a760ae1802f540e8 319 SUPERFAMILY SSF161098 75 304 6.15E-59 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_32480 fb8a8dac934d2514a760ae1802f540e8 319 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 305 1.0E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_32480 fb8a8dac934d2514a760ae1802f540e8 319 Gene3D G3DSA:1.10.3720.10 71 316 9.4E-67 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_28580 a595127ff311552f9803a58931fb0c97 788 Gene3D G3DSA:2.30.120.10 306 376 1.5E-208 T 14-10-2018 AMIS_28580 a595127ff311552f9803a58931fb0c97 788 SUPERFAMILY SSF56235 38 783 2.83E-154 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMIS_28580 a595127ff311552f9803a58931fb0c97 788 Pfam PF01804 Penicillin amidase 40 773 4.3E-124 T 14-10-2018 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase GO:0016787|GO:0017000 AMIS_28580 a595127ff311552f9803a58931fb0c97 788 Gene3D G3DSA:3.60.20.10 231 772 1.5E-208 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMIS_28580 a595127ff311552f9803a58931fb0c97 788 Gene3D G3DSA:1.10.1400.10 521 712 1.5E-208 T 14-10-2018 AMIS_28580 a595127ff311552f9803a58931fb0c97 788 Gene3D G3DSA:1.10.439.10 29 204 2.3E-57 T 14-10-2018 IPR023343 Penicillin amidase type, domain 1 GO:0016811 AMIS_68610 023d258c147d3307028cc9745c18f7f4 72 Pfam PF11238 Protein of unknown function (DUF3039) 15 70 3.7E-28 T 14-10-2018 IPR021400 Protein of unknown function DUF3039 AMIS_570 481d141f4f23d091204f2310a5e4edb1 306 SUPERFAMILY SSF49899 232 303 2.18E-8 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily AMIS_570 481d141f4f23d091204f2310a5e4edb1 306 Gene3D G3DSA:2.60.120.200 170 306 1.9E-6 T 14-10-2018 AMIS_570 481d141f4f23d091204f2310a5e4edb1 306 Pfam PF02210 Laminin G domain 207 302 1.5E-5 T 14-10-2018 IPR001791 Laminin G domain AMIS_64300 b6ce82a7e6f4bb997ba17db52d3eb5fe 174 Gene3D G3DSA:2.40.128.110 11 172 3.7E-24 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily AMIS_64300 b6ce82a7e6f4bb997ba17db52d3eb5fe 174 SMART SM00867 11 168 8.2E-15 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AMIS_64300 b6ce82a7e6f4bb997ba17db52d3eb5fe 174 Pfam PF04264 YceI-like domain 12 166 7.7E-21 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AMIS_64300 b6ce82a7e6f4bb997ba17db52d3eb5fe 174 SUPERFAMILY SSF101874 9 168 5.75E-23 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily AMIS_41550 21bec3984b660029140e262872444983 254 Pfam PF01553 Acyltransferase 31 159 9.7E-21 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AMIS_41550 21bec3984b660029140e262872444983 254 SUPERFAMILY SSF69593 8 224 9.55E-34 T 14-10-2018 AMIS_41550 21bec3984b660029140e262872444983 254 SMART SM00563 45 163 2.2E-27 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AMIS_38040 56f34a7d646b96c837028f0e6e5c0899 425 Gene3D G3DSA:3.20.20.30 3 424 2.8E-117 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_38040 56f34a7d646b96c837028f0e6e5c0899 425 SUPERFAMILY SSF51679 2 422 3.27E-102 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_38040 56f34a7d646b96c837028f0e6e5c0899 425 PIRSF PIRSF000337 2 425 6.2E-133 T 14-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 AMIS_38040 56f34a7d646b96c837028f0e6e5c0899 425 Pfam PF00296 Luciferase-like monooxygenase 23 374 1.2E-56 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMIS_29210 a71b8cccb0a23fd209e3bafd2c689a51 672 Pfam PF05425 Copper resistance protein D 228 323 4.0E-15 T 14-10-2018 IPR008457 Copper resistance protein D GO:0016021 AMIS_29210 a71b8cccb0a23fd209e3bafd2c689a51 672 Pfam PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) 376 621 1.8E-73 T 14-10-2018 IPR019108 Cytochrome c oxidase caa3-type, assembly factor CtaG-related AMIS_7350 af9c5c8e9215a19f1783a1f36fcc672e 292 SUPERFAMILY SSF52540 28 286 2.25E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_7350 af9c5c8e9215a19f1783a1f36fcc672e 292 Pfam PF00685 Sulfotransferase domain 33 242 1.5E-16 T 14-10-2018 IPR000863 Sulfotransferase domain GO:0008146 AMIS_7350 af9c5c8e9215a19f1783a1f36fcc672e 292 Gene3D G3DSA:3.40.50.300 14 291 1.3E-65 T 14-10-2018 AMIS_4820 dc35752ca7c9748fa2e118d19fd4bf57 405 SUPERFAMILY SSF89550 65 285 1.12E-26 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AMIS_4820 dc35752ca7c9748fa2e118d19fd4bf57 405 Gene3D G3DSA:3.20.20.140 53 290 3.1E-43 T 14-10-2018 AMIS_4820 dc35752ca7c9748fa2e118d19fd4bf57 405 Pfam PF12228 Protein of unknown function (DUF3604) 107 142 3.7E-5 T 14-10-2018 IPR022028 Protein of unknown function DUF3604 AMIS_12160 4756781a4a8c56cb680ebfd0b8268d42 371 Gene3D G3DSA:1.20.1250.20 4 366 9.5E-22 T 14-10-2018 AMIS_12160 4756781a4a8c56cb680ebfd0b8268d42 371 SUPERFAMILY SSF103473 9 365 3.14E-26 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_12160 4756781a4a8c56cb680ebfd0b8268d42 371 Pfam PF07690 Major Facilitator Superfamily 9 324 1.6E-20 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_7530 6e5bf35788a24420d3a05f70e85a7569 319 Gene3D G3DSA:1.10.287.1080 112 237 5.3E-40 T 14-10-2018 AMIS_7530 6e5bf35788a24420d3a05f70e85a7569 319 SUPERFAMILY SSF101386 117 214 8.22E-19 T 14-10-2018 AMIS_7530 6e5bf35788a24420d3a05f70e85a7569 319 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 136 212 3.8E-23 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core AMIS_660 b95ab5fb9b3db422d2900438122e72a2 752 SUPERFAMILY SSF52743 133 401 4.19E-36 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AMIS_660 b95ab5fb9b3db422d2900438122e72a2 752 Gene3D G3DSA:2.60.40.10 664 750 1.8E-15 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_660 b95ab5fb9b3db422d2900438122e72a2 752 Gene3D G3DSA:3.40.50.200 106 404 2.6E-42 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AMIS_660 b95ab5fb9b3db422d2900438122e72a2 752 Pfam PF00082 Subtilase family 146 387 6.2E-15 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AMIS_45560 688440b2acfee098b7d6adc3e0b35f07 92 Gene3D G3DSA:1.10.10.10 1 91 6.2E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_45560 688440b2acfee098b7d6adc3e0b35f07 92 SUPERFAMILY SSF46785 4 89 2.28E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_45560 688440b2acfee098b7d6adc3e0b35f07 92 SMART SM00418 12 90 6.5E-12 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_44870 9e233473fa74c7d05a52c810f244ec82 257 Pfam PF00005 ABC transporter 24 159 4.9E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_44870 9e233473fa74c7d05a52c810f244ec82 257 Gene3D G3DSA:3.40.50.300 1 216 2.2E-59 T 14-10-2018 AMIS_44870 9e233473fa74c7d05a52c810f244ec82 257 SUPERFAMILY SSF52540 7 208 3.68E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_44870 9e233473fa74c7d05a52c810f244ec82 257 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_44870 9e233473fa74c7d05a52c810f244ec82 257 SMART SM00382 31 218 5.7E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_45950 e17574c8c392d0a72e42cce6ce42b1a2 263 SUPERFAMILY SSF53649 10 255 9.81E-21 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AMIS_45950 e17574c8c392d0a72e42cce6ce42b1a2 263 Gene3D G3DSA:3.40.720.10 6 256 2.0E-17 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AMIS_45950 e17574c8c392d0a72e42cce6ce42b1a2 263 Pfam PF00884 Sulfatase 10 247 2.4E-10 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 AMIS_31190 0a92984c239ec6cdf3d75f595946b59c 415 Pfam PF07690 Major Facilitator Superfamily 31 221 1.1E-11 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_31190 0a92984c239ec6cdf3d75f595946b59c 415 Pfam PF07690 Major Facilitator Superfamily 237 410 7.9E-12 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_31190 0a92984c239ec6cdf3d75f595946b59c 415 SUPERFAMILY SSF103473 22 411 2.09E-40 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_31190 0a92984c239ec6cdf3d75f595946b59c 415 Gene3D G3DSA:1.20.1250.20 21 210 1.3E-19 T 14-10-2018 AMIS_31190 0a92984c239ec6cdf3d75f595946b59c 415 Gene3D G3DSA:1.20.1250.20 229 414 5.7E-16 T 14-10-2018 AMIS_49040 8071541558e37fb3293acc11deff0129 204 TIGRFAM TIGR04037 LLM_duo_CE1759: LLM-partnered FMN reductase, CE1759 family 6 202 1.4E-81 T 14-10-2018 IPR023932 Uncharacterised protein family, CE1759 AMIS_49040 8071541558e37fb3293acc11deff0129 204 Gene3D G3DSA:3.40.50.360 1 183 4.2E-51 T 14-10-2018 IPR029039 Flavoprotein-like superfamily AMIS_49040 8071541558e37fb3293acc11deff0129 204 SUPERFAMILY SSF52218 4 183 1.68E-28 T 14-10-2018 IPR029039 Flavoprotein-like superfamily AMIS_49040 8071541558e37fb3293acc11deff0129 204 Pfam PF03358 NADPH-dependent FMN reductase 5 155 1.9E-35 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AMIS_79540 1b6012c3c1958d8563c55820bd157e1e 408 Gene3D G3DSA:3.30.565.10 248 372 2.7E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_79540 1b6012c3c1958d8563c55820bd157e1e 408 SUPERFAMILY SSF55874 264 372 5.57E-13 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_79540 1b6012c3c1958d8563c55820bd157e1e 408 SMART SM00387 281 373 1.3E-4 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_79540 1b6012c3c1958d8563c55820bd157e1e 408 Pfam PF07730 Histidine kinase 181 246 1.2E-16 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMIS_2070 100b1cc1e03af3bbda9f629967f75055 120 Pfam PF14012 Protein of unknown function (DUF4229) 6 66 2.1E-15 T 14-10-2018 IPR025323 Protein of unknown function DUF4229 AMIS_2920 7c262bc4270ec7405f7c2d212e4db61d 248 Gene3D G3DSA:1.20.120.1200 11 172 9.5E-43 T 14-10-2018 AMIS_2920 7c262bc4270ec7405f7c2d212e4db61d 248 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 23 169 4.1E-33 T 14-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_44970 2a72863886e31b2d7756ccc882610997 221 SUPERFAMILY SSF53335 35 212 7.38E-24 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_44970 2a72863886e31b2d7756ccc882610997 221 Pfam PF08241 Methyltransferase domain 44 132 3.4E-9 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 AMIS_44970 2a72863886e31b2d7756ccc882610997 221 Gene3D G3DSA:2.20.25.570 136 189 4.9E-24 T 14-10-2018 AMIS_44970 2a72863886e31b2d7756ccc882610997 221 Gene3D G3DSA:3.40.50.150 40 208 4.9E-24 T 14-10-2018 AMIS_45340 d47f16e791986f10e54495ab45d6555a 555 Pfam PF09992 Phosphodiester glycosidase 361 552 2.3E-28 T 14-10-2018 IPR018711 Phosphodiester glycosidase AMIS_68250 115abcacdb13216d97083ca46f69e2af 201 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 4 173 2.9E-40 T 14-10-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 AMIS_68250 115abcacdb13216d97083ca46f69e2af 201 Gene3D G3DSA:3.40.50.360 1 201 2.0E-59 T 14-10-2018 IPR029039 Flavoprotein-like superfamily AMIS_68250 115abcacdb13216d97083ca46f69e2af 201 Pfam PF03358 NADPH-dependent FMN reductase 15 148 2.6E-17 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AMIS_68250 115abcacdb13216d97083ca46f69e2af 201 SUPERFAMILY SSF52218 5 199 9.3E-47 T 14-10-2018 IPR029039 Flavoprotein-like superfamily AMIS_64910 c5915b7af0de487fd9b77fd99419d655 99 Pfam PF13396 Phospholipase_D-nuclease N-terminal 14 59 2.7E-10 T 14-10-2018 IPR027379 Cardiolipin synthase N-terminal AMIS_11660 aef422dd904034b7c549c07a8e8f6337 250 Gene3D G3DSA:2.40.33.20 177 250 2.0E-6 T 14-10-2018 AMIS_11660 aef422dd904034b7c549c07a8e8f6337 250 Gene3D G3DSA:2.40.33.20 1 118 3.7E-15 T 14-10-2018 AMIS_11660 aef422dd904034b7c549c07a8e8f6337 250 SUPERFAMILY SSF50800 177 240 6.28E-8 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily AMIS_11660 aef422dd904034b7c549c07a8e8f6337 250 SUPERFAMILY SSF50800 3 116 1.52E-19 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily AMIS_10290 af38a9eb407ecee66454ad2faca73b0a 199 SUPERFAMILY SSF52540 18 189 4.3E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_10290 af38a9eb407ecee66454ad2faca73b0a 199 Gene3D G3DSA:3.40.50.300 13 195 3.8E-17 T 14-10-2018 AMIS_10290 af38a9eb407ecee66454ad2faca73b0a 199 Pfam PF03029 Conserved hypothetical ATP binding protein 23 187 1.4E-25 T 14-10-2018 IPR004130 GPN-loop GTPase AMIS_44380 64ef766c448186e3f997065796e2e675 157 Gene3D G3DSA:2.170.16.10 2 58 8.3E-12 T 14-10-2018 AMIS_28210 7ebcbfe03b7eb14417e70629ee3b2af6 347 Pfam PF06030 Bacterial protein of unknown function (DUF916) 48 140 1.9E-9 T 14-10-2018 IPR010317 Protein of unknown function DUF916, cell surface putative AMIS_57080 a5f493c62e8686da3c6bf4a3058cc24a 167 SUPERFAMILY SSF54637 40 165 5.38E-16 T 14-10-2018 IPR029069 HotDog domain superfamily AMIS_57080 a5f493c62e8686da3c6bf4a3058cc24a 167 Pfam PF13452 N-terminal half of MaoC dehydratase 28 155 9.9E-11 T 14-10-2018 IPR039569 N-terminal of MaoC-like dehydratase Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241|Reactome: R-HSA-9033500 AMIS_57080 a5f493c62e8686da3c6bf4a3058cc24a 167 Gene3D G3DSA:3.10.129.10 24 167 1.1E-20 T 14-10-2018 AMIS_67550 0b144b2c7e7370876ffb55e1bfbe41a2 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 102 279 1.9E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_67550 0b144b2c7e7370876ffb55e1bfbe41a2 291 Gene3D G3DSA:1.10.3720.10 12 282 2.7E-59 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_67550 0b144b2c7e7370876ffb55e1bfbe41a2 291 SUPERFAMILY SSF161098 17 291 2.09E-57 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_33250 bdef829d613d797de9c7a753e2d5c903 399 Pfam PF04542 Sigma-70 region 2 13 75 2.5E-8 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_33250 bdef829d613d797de9c7a753e2d5c903 399 Gene3D G3DSA:1.10.10.10 87 164 1.6E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_33250 bdef829d613d797de9c7a753e2d5c903 399 SUPERFAMILY SSF88659 100 162 3.18E-8 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_33250 bdef829d613d797de9c7a753e2d5c903 399 Pfam PF08281 Sigma-70, region 4 112 159 5.8E-6 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMIS_33250 bdef829d613d797de9c7a753e2d5c903 399 SUPERFAMILY SSF88946 5 73 1.49E-10 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_33250 bdef829d613d797de9c7a753e2d5c903 399 Gene3D G3DSA:1.10.1740.10 2 73 2.5E-5 T 14-10-2018 AMIS_50980 9d5cf18460cba85890befa110ef6c763 138 Pfam PF14078 Domain of unknown function (DUF4259) 2 118 7.2E-33 T 14-10-2018 IPR025355 Protein of unknown function DUF4259 AMIS_6700 76f44b52b5a1458d84b234cf04d62ef1 219 SUPERFAMILY SSF53067 110 202 7.38E-12 T 14-10-2018 AMIS_6700 76f44b52b5a1458d84b234cf04d62ef1 219 Gene3D G3DSA:3.30.420.40 99 175 1.9E-41 T 14-10-2018 AMIS_6700 76f44b52b5a1458d84b234cf04d62ef1 219 Gene3D G3DSA:3.30.420.40 3 204 1.9E-41 T 14-10-2018 AMIS_6700 76f44b52b5a1458d84b234cf04d62ef1 219 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 204 1.6E-50 T 14-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 AMIS_6700 76f44b52b5a1458d84b234cf04d62ef1 219 Pfam PF00814 Glycoprotease family 37 146 3.0E-24 T 14-10-2018 IPR000905 Gcp-like domain AMIS_6700 76f44b52b5a1458d84b234cf04d62ef1 219 SUPERFAMILY SSF53067 3 103 3.28E-20 T 14-10-2018 AMIS_7950 7cbc7f4fa163b628e9cac6b82fd412ff 508 Gene3D G3DSA:3.40.91.100 371 493 4.1E-6 T 14-10-2018 AMIS_7950 7cbc7f4fa163b628e9cac6b82fd412ff 508 SUPERFAMILY SSF52980 375 486 1.39E-13 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AMIS_7950 7cbc7f4fa163b628e9cac6b82fd412ff 508 Pfam PF04471 Restriction endonuclease 371 483 1.6E-26 T 14-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 AMIS_58930 fc90c82e19f4c585564cbab709d74bce 100 Pfam PF10824 Excreted virulence factor EspC, type VII ESX diderm 15 98 4.7E-6 T 14-10-2018 IPR022536 ESX-1 secretion-associated protein EspC GO:0009306 AMIS_60160 9c99afbfe2df4e4b444c2079919b0532 491 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 297 445 1.0E-18 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AMIS_60160 9c99afbfe2df4e4b444c2079919b0532 491 SUPERFAMILY SSF53067 17 260 1.08E-36 T 14-10-2018 AMIS_60160 9c99afbfe2df4e4b444c2079919b0532 491 Gene3D G3DSA:3.30.420.40 12 243 1.7E-42 T 14-10-2018 AMIS_60160 9c99afbfe2df4e4b444c2079919b0532 491 Gene3D G3DSA:3.30.420.40 260 490 1.5E-41 T 14-10-2018 AMIS_60160 9c99afbfe2df4e4b444c2079919b0532 491 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 17 222 7.2E-27 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AMIS_60160 9c99afbfe2df4e4b444c2079919b0532 491 SUPERFAMILY SSF53067 260 488 1.59E-27 T 14-10-2018 AMIS_60160 9c99afbfe2df4e4b444c2079919b0532 491 PIRSF PIRSF000538 15 491 8.1E-67 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AMIS_43420 cd1b3a9e73bd06aaccd89015bfa1e2f3 278 Pfam PF01551 Peptidase family M23 119 231 8.9E-18 T 14-10-2018 IPR016047 Peptidase M23 AMIS_43420 cd1b3a9e73bd06aaccd89015bfa1e2f3 278 SUPERFAMILY SSF51261 118 226 1.83E-21 T 14-10-2018 IPR011055 Duplicated hybrid motif AMIS_43420 cd1b3a9e73bd06aaccd89015bfa1e2f3 278 Gene3D G3DSA:2.70.70.10 103 252 5.0E-25 T 14-10-2018 IPR011055 Duplicated hybrid motif AMIS_1790 19a989e0a332cc3bb496254b6874d9dc 185 Gene3D G3DSA:3.40.430.10 1 183 1.5E-39 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AMIS_1790 19a989e0a332cc3bb496254b6874d9dc 185 SUPERFAMILY SSF53597 4 179 2.62E-27 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AMIS_1790 19a989e0a332cc3bb496254b6874d9dc 185 Pfam PF01872 RibD C-terminal domain 7 172 1.4E-9 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 AMIS_22670 12d0c6862590daa7cc6ad6e86ca22ec5 310 Pfam PF13581 Histidine kinase-like ATPase domain 195 306 3.7E-13 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_22670 12d0c6862590daa7cc6ad6e86ca22ec5 310 Pfam PF14417 MEDS: MEthanogen/methylotroph, DcmR Sensory domain 9 153 2.2E-25 T 14-10-2018 IPR025847 MEDS domain AMIS_22670 12d0c6862590daa7cc6ad6e86ca22ec5 310 SUPERFAMILY SSF55874 217 308 3.91E-7 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_22670 12d0c6862590daa7cc6ad6e86ca22ec5 310 Gene3D G3DSA:3.30.565.10 192 310 7.3E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_15830 a70b379fc1ec2d2edb0f81da450ad3af 142 SMART SM00418 60 140 5.8E-29 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_15830 a70b379fc1ec2d2edb0f81da450ad3af 142 Gene3D G3DSA:1.10.10.10 43 141 2.6E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_15830 a70b379fc1ec2d2edb0f81da450ad3af 142 SUPERFAMILY SSF46785 48 139 6.99E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_15830 a70b379fc1ec2d2edb0f81da450ad3af 142 Pfam PF01022 Bacterial regulatory protein, arsR family 67 115 7.0E-15 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_15830 a70b379fc1ec2d2edb0f81da450ad3af 142 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 112 127 3.4E-20 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_15830 a70b379fc1ec2d2edb0f81da450ad3af 142 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 84 95 3.4E-20 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_15830 a70b379fc1ec2d2edb0f81da450ad3af 142 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 62 77 3.4E-20 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_15830 a70b379fc1ec2d2edb0f81da450ad3af 142 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 97 112 3.4E-20 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_15830 a70b379fc1ec2d2edb0f81da450ad3af 142 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 86 104 - T 14-10-2018 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 AMIS_66840 fba9fcdd8103a6ca85c7b4156e3dd362 370 Pfam PF07728 AAA domain (dynein-related subfamily) 80 220 1.1E-34 T 14-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 AMIS_66840 fba9fcdd8103a6ca85c7b4156e3dd362 370 SUPERFAMILY SSF52540 56 267 1.28E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_66840 fba9fcdd8103a6ca85c7b4156e3dd362 370 Gene3D G3DSA:3.40.50.300 61 239 2.9E-24 T 14-10-2018 AMIS_72830 dd8b285e4e8571c8b8f7689fc086fd27 316 Gene3D G3DSA:3.90.180.10 1 314 3.7E-69 T 14-10-2018 AMIS_72830 dd8b285e4e8571c8b8f7689fc086fd27 316 SUPERFAMILY SSF50129 10 147 6.91E-29 T 14-10-2018 IPR011032 GroES-like superfamily AMIS_72830 dd8b285e4e8571c8b8f7689fc086fd27 316 SUPERFAMILY SSF51735 122 289 1.13E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_72830 dd8b285e4e8571c8b8f7689fc086fd27 316 Pfam PF13602 Zinc-binding dehydrogenase 203 312 4.3E-19 T 14-10-2018 AMIS_72830 dd8b285e4e8571c8b8f7689fc086fd27 316 SMART SM00829 13 312 6.8E-13 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMIS_7140 f67f8a9b0094d09315cfa05a83326fde 248 SUPERFAMILY SSF51261 101 223 1.2E-44 T 14-10-2018 IPR011055 Duplicated hybrid motif AMIS_7140 f67f8a9b0094d09315cfa05a83326fde 248 Gene3D G3DSA:2.70.70.10 77 227 3.5E-41 T 14-10-2018 IPR011055 Duplicated hybrid motif AMIS_7140 f67f8a9b0094d09315cfa05a83326fde 248 Pfam PF01551 Peptidase family M23 125 219 2.3E-28 T 14-10-2018 IPR016047 Peptidase M23 AMIS_55900 9ff01000b4a911d7b7506473c94e6589 242 PIRSF PIRSF006648 3 242 1.8E-18 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AMIS_55900 9ff01000b4a911d7b7506473c94e6589 242 Pfam PF01061 ABC-2 type transporter 3 203 6.6E-32 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 AMIS_16600 e911b2ea47d9beb0683497faa4d85794 309 SUPERFAMILY SSF53613 5 307 9.35E-62 T 14-10-2018 IPR029056 Ribokinase-like AMIS_16600 e911b2ea47d9beb0683497faa4d85794 309 Pfam PF00294 pfkB family carbohydrate kinase 4 300 1.4E-49 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB AMIS_16600 e911b2ea47d9beb0683497faa4d85794 309 Gene3D G3DSA:3.40.1190.20 4 308 1.3E-70 T 14-10-2018 IPR029056 Ribokinase-like AMIS_16600 e911b2ea47d9beb0683497faa4d85794 309 PRINTS PR00990 Ribokinase signature 217 228 1.8E-5 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AMIS_16600 e911b2ea47d9beb0683497faa4d85794 309 PRINTS PR00990 Ribokinase signature 25 44 1.8E-5 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AMIS_16600 e911b2ea47d9beb0683497faa4d85794 309 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 30 54 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AMIS_54790 415747a52c87c00166c0a0350831fd17 359 Gene3D G3DSA:3.20.20.190 33 355 2.6E-106 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 AMIS_54790 415747a52c87c00166c0a0350831fd17 359 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 39 350 1.5E-47 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 AMIS_54790 415747a52c87c00166c0a0350831fd17 359 SUPERFAMILY SSF51695 35 351 3.4E-73 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 AMIS_47020 70cd8103503110dcfd250d89eaa044db 361 TIGRFAM TIGR03181 PDH_E1_alph_x: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 2 349 2.9E-125 T 14-10-2018 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 AMIS_47020 70cd8103503110dcfd250d89eaa044db 361 Pfam PF00676 Dehydrogenase E1 component 39 322 1.7E-67 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 AMIS_47020 70cd8103503110dcfd250d89eaa044db 361 Gene3D G3DSA:3.40.50.970 1 350 2.6E-106 T 14-10-2018 AMIS_47020 70cd8103503110dcfd250d89eaa044db 361 SUPERFAMILY SSF52518 24 353 4.42E-91 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold AMIS_11400 4f297e51c3bf4f42685cf635594a92b0 114 SUPERFAMILY SSF52091 16 97 9.42E-12 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_11400 4f297e51c3bf4f42685cf635594a92b0 114 Gene3D G3DSA:3.30.750.24 4 113 2.1E-14 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_11400 4f297e51c3bf4f42685cf635594a92b0 114 Pfam PF01740 STAS domain 16 97 1.8E-9 T 14-10-2018 IPR002645 STAS domain AMIS_27430 880aaa5ba373cec1dc54e808b73f53e1 218 SMART SM00448 4 117 2.0E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_27430 880aaa5ba373cec1dc54e808b73f53e1 218 Pfam PF00072 Response regulator receiver domain 6 118 1.9E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_27430 880aaa5ba373cec1dc54e808b73f53e1 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 170 1.7E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_27430 880aaa5ba373cec1dc54e808b73f53e1 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 186 1.7E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_27430 880aaa5ba373cec1dc54e808b73f53e1 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 198 1.7E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_27430 880aaa5ba373cec1dc54e808b73f53e1 218 Gene3D G3DSA:3.40.50.12740 4 216 4.1E-68 T 14-10-2018 AMIS_27430 880aaa5ba373cec1dc54e808b73f53e1 218 ProSitePatterns PS00622 LuxR-type HTH domain signature. 170 197 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_27430 880aaa5ba373cec1dc54e808b73f53e1 218 SUPERFAMILY SSF52172 4 134 1.21E-34 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_27430 880aaa5ba373cec1dc54e808b73f53e1 218 SMART SM00421 153 210 4.1E-23 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_27430 880aaa5ba373cec1dc54e808b73f53e1 218 Pfam PF00196 Bacterial regulatory proteins, luxR family 157 210 4.4E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_27430 880aaa5ba373cec1dc54e808b73f53e1 218 SUPERFAMILY SSF46894 139 216 1.22E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_29890 433f18d8357c827c5247ca1967d31e68 318 Pfam PF05448 Acetyl xylan esterase (AXE1) 1 315 2.8E-117 T 14-10-2018 IPR008391 Acetyl xylan esterase AMIS_29890 433f18d8357c827c5247ca1967d31e68 318 Gene3D G3DSA:3.40.50.1820 1 317 5.6E-98 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_29890 433f18d8357c827c5247ca1967d31e68 318 SUPERFAMILY SSF53474 4 301 1.05E-39 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_78880 35da13e895c4689b65d9dc2418c5796e 78 Pfam PF04149 Domain of unknown function (DUF397) 16 69 1.2E-18 T 14-10-2018 IPR007278 Domain of unknown function DUF397 AMIS_75850 54232720ac5dd9c0e4e907d3216621af 82 Gene3D G3DSA:3.40.30.10 2 79 7.6E-22 T 14-10-2018 AMIS_75850 54232720ac5dd9c0e4e907d3216621af 82 SUPERFAMILY SSF52833 1 75 1.19E-16 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMIS_75850 54232720ac5dd9c0e4e907d3216621af 82 Pfam PF05768 Glutaredoxin-like domain (DUF836) 3 73 1.3E-15 T 14-10-2018 IPR008554 Glutaredoxin-like AMIS_4040 3560b3150a7768b6e43abcbfdb1e1330 257 ProSitePatterns PS00211 ABC transporters family signature. 161 175 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_4040 3560b3150a7768b6e43abcbfdb1e1330 257 Pfam PF00005 ABC transporter 55 188 1.8E-14 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_4040 3560b3150a7768b6e43abcbfdb1e1330 257 SMART SM00382 63 252 5.6E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_4040 3560b3150a7768b6e43abcbfdb1e1330 257 SUPERFAMILY SSF52540 49 255 1.96E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_4040 3560b3150a7768b6e43abcbfdb1e1330 257 Gene3D G3DSA:3.40.50.300 35 257 8.6E-40 T 14-10-2018 AMIS_8490 46d670791d8f0312249cc095a86caeb2 244 TIGRFAM TIGR03089 TIGR03089: TIGR03089 family protein 13 240 1.1E-55 T 14-10-2018 IPR017523 Conserved hypothetical protein CHP03089 AMIS_8490 46d670791d8f0312249cc095a86caeb2 244 SUPERFAMILY SSF56801 4 242 4.06E-19 T 14-10-2018 AMIS_8490 46d670791d8f0312249cc095a86caeb2 244 Pfam PF00501 AMP-binding enzyme 16 89 2.4E-6 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMIS_8490 46d670791d8f0312249cc095a86caeb2 244 Gene3D G3DSA:3.40.50.12780 2 244 2.9E-9 T 14-10-2018 AMIS_27320 b01b6351ff066274e1df749149a1dc80 126 Pfam PF05899 Protein of unknown function (DUF861) 58 120 6.8E-11 T 14-10-2018 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 AMIS_27320 b01b6351ff066274e1df749149a1dc80 126 Gene3D G3DSA:2.60.120.10 19 124 2.8E-23 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMIS_27320 b01b6351ff066274e1df749149a1dc80 126 SUPERFAMILY SSF51182 52 123 2.14E-10 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily AMIS_42460 d0dc80abf3e4f11816fe1964e5b8e201 187 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 1.2E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_42460 d0dc80abf3e4f11816fe1964e5b8e201 187 Gene3D G3DSA:1.10.10.60 4 62 4.1E-20 T 14-10-2018 AMIS_42460 d0dc80abf3e4f11816fe1964e5b8e201 187 SUPERFAMILY SSF46689 3 65 2.26E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_42460 d0dc80abf3e4f11816fe1964e5b8e201 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 4.7E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_42460 d0dc80abf3e4f11816fe1964e5b8e201 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 4.7E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_42460 d0dc80abf3e4f11816fe1964e5b8e201 187 SUPERFAMILY SSF48498 78 184 6.23E-25 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_42460 d0dc80abf3e4f11816fe1964e5b8e201 187 Gene3D G3DSA:1.10.357.10 63 186 1.3E-30 T 14-10-2018 AMIS_15080 4e64690f99a5eb0cfcfe93c0860348f5 434 Pfam PF01882 Protein of unknown function DUF58 198 282 4.7E-23 T 14-10-2018 IPR002881 Domain of unknown function DUF58 AMIS_54380 948d3004ad77185ccb4431a6e02e7699 555 SUPERFAMILY SSF55781 218 285 8.97E-8 T 14-10-2018 AMIS_54380 948d3004ad77185ccb4431a6e02e7699 555 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 328 521 3.1E-40 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_54380 948d3004ad77185ccb4431a6e02e7699 555 SMART SM00331 299 521 2.9E-31 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_54380 948d3004ad77185ccb4431a6e02e7699 555 Gene3D G3DSA:3.30.450.40 141 272 9.1E-8 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_54380 948d3004ad77185ccb4431a6e02e7699 555 SUPERFAMILY SSF81606 314 520 8.63E-6 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_54380 948d3004ad77185ccb4431a6e02e7699 555 Gene3D G3DSA:3.60.40.10 273 522 1.4E-55 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_37160 833278e5c3b81305e990350d8106f740 217 Pfam PF03734 L,D-transpeptidase catalytic domain 94 215 1.9E-15 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 AMIS_37160 833278e5c3b81305e990350d8106f740 217 Gene3D G3DSA:2.40.440.10 60 217 9.3E-24 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like AMIS_37160 833278e5c3b81305e990350d8106f740 217 SUPERFAMILY SSF141523 95 215 1.7E-19 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like AMIS_55540 82e817aeb8c2779d695400ebdcf5a27f 90 Gene3D G3DSA:1.10.10.10 1 89 2.6E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_55540 82e817aeb8c2779d695400ebdcf5a27f 90 SUPERFAMILY SSF46785 2 81 1.47E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_55540 82e817aeb8c2779d695400ebdcf5a27f 90 SMART SM00418 3 67 0.0036 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_24960 8a5db5af3c221394feb041303e461a1a 107 Gene3D G3DSA:3.40.50.970 1 105 1.4E-17 T 14-10-2018 AMIS_24960 8a5db5af3c221394feb041303e461a1a 107 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 1 88 7.0E-9 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AMIS_24960 8a5db5af3c221394feb041303e461a1a 107 SUPERFAMILY SSF52518 1 103 2.09E-17 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold AMIS_26320 2416787910c225ba4a42a02df0623596 273 SUPERFAMILY SSF161098 8 268 1.44E-63 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_26320 2416787910c225ba4a42a02df0623596 273 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 102 262 2.8E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_26320 2416787910c225ba4a42a02df0623596 273 Gene3D G3DSA:1.10.3720.10 2 265 1.6E-57 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_23020 b36cb099c2af5e3411858256c80b807d 218 Gene3D G3DSA:1.10.357.10 26 205 2.2E-25 T 14-10-2018 AMIS_23020 b36cb099c2af5e3411858256c80b807d 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 47 2.8E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_23020 b36cb099c2af5e3411858256c80b807d 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 55 78 2.8E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_23020 b36cb099c2af5e3411858256c80b807d 218 Pfam PF00440 Bacterial regulatory proteins, tetR family 34 80 3.9E-14 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_23020 b36cb099c2af5e3411858256c80b807d 218 SUPERFAMILY SSF46689 24 96 1.5E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_47080 967662d12f9d85fb9d61c8a043743793 378 Gene3D G3DSA:3.30.565.10 248 371 7.6E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_47080 967662d12f9d85fb9d61c8a043743793 378 SUPERFAMILY SSF55874 254 370 8.25E-14 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_47080 967662d12f9d85fb9d61c8a043743793 378 Pfam PF07730 Histidine kinase 183 248 1.6E-15 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMIS_76700 8020385254f9d96239399fa3d2d4677d 302 Pfam PF06089 L-asparaginase II 4 299 7.8E-107 T 14-10-2018 IPR010349 L-asparaginase II AMIS_46670 103a998a5003beab6ab538773c044a1b 102 SUPERFAMILY SSF46785 2 91 1.82E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_46670 103a998a5003beab6ab538773c044a1b 102 Gene3D G3DSA:1.10.10.10 2 94 3.5E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_46670 103a998a5003beab6ab538773c044a1b 102 Pfam PF13601 Winged helix DNA-binding domain 13 91 5.0E-28 T 14-10-2018 IPR027395 Winged helix DNA-binding domain AMIS_33290 ddd4c2c762130056e08ab6d94faf255b 164 Pfam PF00255 Glutathione peroxidase 4 110 4.9E-40 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AMIS_33290 ddd4c2c762130056e08ab6d94faf255b 164 PRINTS PR01011 Glutathione peroxidase family signature 123 132 8.4E-18 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AMIS_33290 ddd4c2c762130056e08ab6d94faf255b 164 PRINTS PR01011 Glutathione peroxidase family signature 57 73 8.4E-18 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AMIS_33290 ddd4c2c762130056e08ab6d94faf255b 164 PRINTS PR01011 Glutathione peroxidase family signature 22 39 8.4E-18 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AMIS_33290 ddd4c2c762130056e08ab6d94faf255b 164 Gene3D G3DSA:3.40.30.10 1 164 9.9E-60 T 14-10-2018 AMIS_33290 ddd4c2c762130056e08ab6d94faf255b 164 SUPERFAMILY SSF52833 3 162 1.52E-54 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMIS_33290 ddd4c2c762130056e08ab6d94faf255b 164 PIRSF PIRSF000303 1 164 2.0E-62 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AMIS_15110 a76267aadf38d9b8769ead953f937c92 239 Pfam PF09335 SNARE associated Golgi protein 82 198 7.1E-21 T 14-10-2018 IPR032816 SNARE associated Golgi protein AMIS_12020 c96b713386c0f8ced420eaef223b6896 133 Pfam PF01475 Ferric uptake regulator family 8 122 2.0E-30 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 AMIS_12020 c96b713386c0f8ced420eaef223b6896 133 Gene3D G3DSA:3.30.1490.190 82 133 1.1E-24 T 14-10-2018 AMIS_12020 c96b713386c0f8ced420eaef223b6896 133 Gene3D G3DSA:1.10.10.10 1 81 9.5E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_12020 c96b713386c0f8ced420eaef223b6896 133 SUPERFAMILY SSF46785 7 127 2.4E-34 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_56090 e836dd1e4f350b3f52a7675fd736a2f0 196 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 120 188 5.4E-15 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMIS_56090 e836dd1e4f350b3f52a7675fd736a2f0 196 Gene3D G3DSA:1.10.150.240 23 93 3.5E-46 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AMIS_56090 e836dd1e4f350b3f52a7675fd736a2f0 196 Pfam PF13419 Haloacid dehalogenase-like hydrolase 14 190 1.1E-25 T 14-10-2018 AMIS_56090 e836dd1e4f350b3f52a7675fd736a2f0 196 Gene3D G3DSA:3.40.50.1000 11 191 3.5E-46 T 14-10-2018 IPR023214 HAD superfamily AMIS_56090 e836dd1e4f350b3f52a7675fd736a2f0 196 SUPERFAMILY SSF56784 10 195 8.57E-49 T 14-10-2018 IPR036412 HAD-like superfamily AMIS_1670 55a6716db765fd9f8f281848108b46b9 285 Pfam PF14361 RsbT co-antagonist protein rsbRD N-terminal domain 11 109 1.4E-22 T 14-10-2018 IPR025751 RsbT co-antagonist protein RsbRD, N-terminal domain AMIS_1670 55a6716db765fd9f8f281848108b46b9 285 SUPERFAMILY SSF52091 159 269 1.69E-17 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_1670 55a6716db765fd9f8f281848108b46b9 285 Pfam PF01740 STAS domain 166 264 8.6E-10 T 14-10-2018 IPR002645 STAS domain AMIS_1670 55a6716db765fd9f8f281848108b46b9 285 Gene3D G3DSA:3.30.750.24 155 273 4.7E-36 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_59890 f466b4b39a3a5c361700bdf3dc3abce1 314 SUPERFAMILY SSF161098 76 301 5.36E-55 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_59890 f466b4b39a3a5c361700bdf3dc3abce1 314 Gene3D G3DSA:1.10.3720.10 72 314 4.7E-67 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_59890 f466b4b39a3a5c361700bdf3dc3abce1 314 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 140 308 6.5E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_42890 a51d3bc5de6d9f2e088c493871b3d9ba 363 Pfam PF07730 Histidine kinase 161 226 2.6E-14 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMIS_42890 a51d3bc5de6d9f2e088c493871b3d9ba 363 Gene3D G3DSA:3.30.565.10 237 361 2.7E-20 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_520 cb31028171e7bfe96f6335d54a2453f0 87 Hamap MF_00631 Cell division protein CrgA [crgA]. 1 87 19.016 T 14-10-2018 IPR009619 Cell division protein CrgA AMIS_520 cb31028171e7bfe96f6335d54a2453f0 87 Pfam PF06781 Cell division protein CrgA 2 87 3.3E-28 T 14-10-2018 IPR009619 Cell division protein CrgA AMIS_47350 0593dac80da60466bf22c61992e0106b 214 SUPERFAMILY SSF46894 144 213 8.16E-14 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_47350 0593dac80da60466bf22c61992e0106b 214 SUPERFAMILY SSF52172 5 135 4.55E-24 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_47350 0593dac80da60466bf22c61992e0106b 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 154 208 6.5E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_47350 0593dac80da60466bf22c61992e0106b 214 SMART SM00421 151 208 1.4E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_47350 0593dac80da60466bf22c61992e0106b 214 Pfam PF00072 Response regulator receiver domain 7 118 2.2E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_47350 0593dac80da60466bf22c61992e0106b 214 Gene3D G3DSA:3.40.50.12740 5 214 1.3E-45 T 14-10-2018 AMIS_47350 0593dac80da60466bf22c61992e0106b 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 1.8E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_47350 0593dac80da60466bf22c61992e0106b 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 1.8E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_47350 0593dac80da60466bf22c61992e0106b 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 1.8E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_47350 0593dac80da60466bf22c61992e0106b 214 SMART SM00448 5 120 1.9E-16 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_47140 b4254b06d1c17e2fcf2ebf9c6a9e7dcf 434 Gene3D G3DSA:3.40.190.10 51 365 2.2E-56 T 14-10-2018 AMIS_47140 b4254b06d1c17e2fcf2ebf9c6a9e7dcf 434 SUPERFAMILY SSF53850 16 392 3.06E-50 T 14-10-2018 AMIS_47140 b4254b06d1c17e2fcf2ebf9c6a9e7dcf 434 Gene3D G3DSA:3.40.190.10 146 385 2.2E-56 T 14-10-2018 AMIS_47140 b4254b06d1c17e2fcf2ebf9c6a9e7dcf 434 Pfam PF01547 Bacterial extracellular solute-binding protein 52 341 1.1E-20 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein AMIS_72480 fa0716556549225be26fa3b12b4e6094 548 Gene3D G3DSA:3.90.400.10 103 172 3.2E-179 T 14-10-2018 AMIS_72480 fa0716556549225be26fa3b12b4e6094 548 SMART SM00642 13 396 6.5E-87 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMIS_72480 fa0716556549225be26fa3b12b4e6094 548 SUPERFAMILY SSF51445 4 460 6.46E-110 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_72480 fa0716556549225be26fa3b12b4e6094 548 PRINTS PR00110 Alpha-amylase signature 92 103 9.7E-5 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 AMIS_72480 fa0716556549225be26fa3b12b4e6094 548 PRINTS PR00110 Alpha-amylase signature 194 205 9.7E-5 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 AMIS_72480 fa0716556549225be26fa3b12b4e6094 548 PRINTS PR00110 Alpha-amylase signature 302 314 9.7E-5 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 AMIS_72480 fa0716556549225be26fa3b12b4e6094 548 Gene3D G3DSA:3.20.20.80 4 457 3.2E-179 T 14-10-2018 AMIS_72480 fa0716556549225be26fa3b12b4e6094 548 Pfam PF00128 Alpha amylase, catalytic domain 28 385 3.2E-68 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMIS_7840 c7178d382e60f856089cee98c8a00e92 301 Pfam PF12706 Beta-lactamase superfamily domain 191 260 1.7E-9 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMIS_7840 c7178d382e60f856089cee98c8a00e92 301 Pfam PF00753 Metallo-beta-lactamase superfamily 18 105 9.6E-14 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMIS_7840 c7178d382e60f856089cee98c8a00e92 301 SUPERFAMILY SSF56281 3 292 5.39E-65 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMIS_7840 c7178d382e60f856089cee98c8a00e92 301 Hamap MF_01818 Ribonuclease BN [rbn]. 2 293 30.13 T 14-10-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 AMIS_7840 c7178d382e60f856089cee98c8a00e92 301 Gene3D G3DSA:3.60.15.10 3 293 5.8E-75 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMIS_3420 b309d136e7c6384b3172fda426f079cd 471 SUPERFAMILY SSF54631 246 355 4.17E-15 T 14-10-2018 AMIS_3420 b309d136e7c6384b3172fda426f079cd 471 Pfam PF00571 CBS domain 248 293 0.0035 T 14-10-2018 IPR000644 CBS domain AMIS_3420 b309d136e7c6384b3172fda426f079cd 471 Gene3D G3DSA:3.10.580.10 247 356 5.9E-10 T 14-10-2018 AMIS_64480 fef59386b0322dd892f8cec294b62233 318 Pfam PF00248 Aldo/keto reductase family 15 314 1.8E-41 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain AMIS_64480 fef59386b0322dd892f8cec294b62233 318 PRINTS PR00069 Aldo-keto reductase signature 41 65 1.3E-6 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMIS_64480 fef59386b0322dd892f8cec294b62233 318 PRINTS PR00069 Aldo-keto reductase signature 147 164 1.3E-6 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMIS_64480 fef59386b0322dd892f8cec294b62233 318 PRINTS PR00069 Aldo-keto reductase signature 102 120 1.3E-6 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMIS_64480 fef59386b0322dd892f8cec294b62233 318 SUPERFAMILY SSF51430 1 314 1.06E-47 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMIS_64480 fef59386b0322dd892f8cec294b62233 318 Gene3D G3DSA:3.20.20.100 1 317 2.7E-48 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMIS_36510 bc44ea7fde0dce9a5e206380e883bf14 314 Gene3D G3DSA:3.40.190.10 31 142 6.6E-14 T 14-10-2018 AMIS_36510 bc44ea7fde0dce9a5e206380e883bf14 314 Pfam PF09084 NMT1/THI5 like 41 257 1.5E-37 T 14-10-2018 IPR015168 SsuA/THI5-like AMIS_36510 bc44ea7fde0dce9a5e206380e883bf14 314 SUPERFAMILY SSF53850 31 258 2.91E-40 T 14-10-2018 AMIS_36510 bc44ea7fde0dce9a5e206380e883bf14 314 Gene3D G3DSA:3.40.190.10 143 313 3.8E-31 T 14-10-2018 AMIS_76210 20a8827607242318f0f3df93169a16d4 123 TIGRFAM TIGR00208 fliS: flagellar protein FliS 1 120 2.1E-20 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 AMIS_76210 20a8827607242318f0f3df93169a16d4 123 Pfam PF02561 Flagellar protein FliS 9 119 2.1E-32 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 AMIS_76210 20a8827607242318f0f3df93169a16d4 123 Gene3D G3DSA:1.20.120.340 1 122 3.0E-30 T 14-10-2018 AMIS_76210 20a8827607242318f0f3df93169a16d4 123 SUPERFAMILY SSF101116 5 120 8.11E-29 T 14-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 AMIS_15120 fb3be04337805be2dd21a11d7a6fb307 237 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 7 198 1.5E-34 T 14-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 AMIS_15120 fb3be04337805be2dd21a11d7a6fb307 237 SUPERFAMILY SSF52317 27 210 4.72E-20 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_15120 fb3be04337805be2dd21a11d7a6fb307 237 Gene3D G3DSA:3.40.50.880 21 207 7.5E-11 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_66100 1d841614643180d79cd3332f9453af34 181 SUPERFAMILY SSF55729 7 174 1.72E-39 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_66100 1d841614643180d79cd3332f9453af34 181 Gene3D G3DSA:3.40.630.30 3 176 3.6E-42 T 14-10-2018 AMIS_66100 1d841614643180d79cd3332f9453af34 181 Pfam PF13302 Acetyltransferase (GNAT) domain 12 150 4.1E-20 T 14-10-2018 IPR000182 GNAT domain AMIS_2900 557291f5b47d102ad9b7b254a0ea4b43 455 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 245 258 - T 14-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_2900 557291f5b47d102ad9b7b254a0ea4b43 455 Pfam PF00146 NADH dehydrogenase 28 362 4.1E-122 T 14-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_2900 557291f5b47d102ad9b7b254a0ea4b43 455 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 21 369 24.022 T 14-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_33700 d2f4ee87a89699c436ea94b1927a9741 330 SMART SM00861 8 183 4.1E-72 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AMIS_33700 d2f4ee87a89699c436ea94b1927a9741 330 Pfam PF02779 Transketolase, pyrimidine binding domain 7 181 2.2E-50 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AMIS_33700 d2f4ee87a89699c436ea94b1927a9741 330 SUPERFAMILY SSF52518 7 186 2.15E-70 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold AMIS_33700 d2f4ee87a89699c436ea94b1927a9741 330 Gene3D G3DSA:3.40.50.970 5 196 3.2E-77 T 14-10-2018 AMIS_33700 d2f4ee87a89699c436ea94b1927a9741 330 Gene3D G3DSA:3.40.50.920 197 326 1.8E-41 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AMIS_33700 d2f4ee87a89699c436ea94b1927a9741 330 SUPERFAMILY SSF52922 194 325 3.01E-36 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AMIS_33700 d2f4ee87a89699c436ea94b1927a9741 330 Pfam PF02780 Transketolase, C-terminal domain 197 318 2.7E-35 T 14-10-2018 IPR033248 Transketolase, C-terminal domain AMIS_57730 b22b2291495abd26ab48993c49694df6 325 Pfam PF04616 Glycosyl hydrolases family 43 41 322 7.9E-48 T 14-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 AMIS_57730 b22b2291495abd26ab48993c49694df6 325 PIRSF PIRSF026534 9 325 2.1E-95 T 14-10-2018 IPR016840 Glycoside hydrolase, family 43, endo-1, 5-alpha-L-arabinosidase GO:0046558 AMIS_57730 b22b2291495abd26ab48993c49694df6 325 Gene3D G3DSA:2.115.10.20 24 324 8.0E-79 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMIS_57730 b22b2291495abd26ab48993c49694df6 325 SUPERFAMILY SSF75005 31 324 1.43E-65 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMIS_42860 915c9fabe0bfe319910193367c83cd8d 366 SUPERFAMILY SSF51735 2 240 1.93E-56 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_42860 915c9fabe0bfe319910193367c83cd8d 366 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 132 160 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMIS_42860 915c9fabe0bfe319910193367c83cd8d 366 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 2.6E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_42860 915c9fabe0bfe319910193367c83cd8d 366 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 2.6E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_42860 915c9fabe0bfe319910193367c83cd8d 366 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 2.6E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_42860 915c9fabe0bfe319910193367c83cd8d 366 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 197 217 2.6E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_42860 915c9fabe0bfe319910193367c83cd8d 366 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 2.6E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_42860 915c9fabe0bfe319910193367c83cd8d 366 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 2.6E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_42860 915c9fabe0bfe319910193367c83cd8d 366 Gene3D G3DSA:3.40.50.720 1 239 1.6E-54 T 14-10-2018 AMIS_42860 915c9fabe0bfe319910193367c83cd8d 366 Pfam PF00106 short chain dehydrogenase 2 186 1.0E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_56230 df8fa99a4b13894038f059892409a8d8 210 Gene3D G3DSA:1.25.40.340 1 207 1.4E-63 T 14-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 AMIS_56230 df8fa99a4b13894038f059892409a8d8 210 SUPERFAMILY SSF101473 3 204 1.03E-53 T 14-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 AMIS_56230 df8fa99a4b13894038f059892409a8d8 210 TIGRFAM TIGR02365 dha_L_ycgS: dihydroxyacetone kinase, L subunit 8 203 1.2E-65 T 14-10-2018 IPR012737 Dihydroxyacetone kinase, subunit L GO:0016772 KEGG: 00561+2.7.1.121 AMIS_56230 df8fa99a4b13894038f059892409a8d8 210 SMART SM01120 30 204 6.0E-76 T 14-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 AMIS_56230 df8fa99a4b13894038f059892409a8d8 210 Pfam PF02734 DAK2 domain 30 203 2.2E-54 T 14-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 AMIS_34270 589e01e9dd904c8ee0d240b06253a3b8 296 Pfam PF00296 Luciferase-like monooxygenase 5 235 2.4E-52 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMIS_34270 589e01e9dd904c8ee0d240b06253a3b8 296 SUPERFAMILY SSF51679 9 272 7.36E-62 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_34270 589e01e9dd904c8ee0d240b06253a3b8 296 Gene3D G3DSA:3.20.20.30 3 296 1.2E-67 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_58880 377d273e917d04326afbbc71ba836b2a 339 Gene3D G3DSA:3.20.20.100 1 325 1.6E-109 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMIS_58880 377d273e917d04326afbbc71ba836b2a 339 SUPERFAMILY SSF51430 1 314 2.75E-95 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMIS_58880 377d273e917d04326afbbc71ba836b2a 339 Pfam PF00248 Aldo/keto reductase family 16 313 5.0E-70 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain AMIS_31020 4254baaf7142c8ffb06bd1375bb5abd4 541 SUPERFAMILY SSF52091 425 515 3.14E-10 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_31020 4254baaf7142c8ffb06bd1375bb5abd4 541 Pfam PF00916 Sulfate permease family 5 364 1.9E-52 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 AMIS_31020 4254baaf7142c8ffb06bd1375bb5abd4 541 Gene3D G3DSA:3.30.750.24 412 539 3.0E-12 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_9760 9b9be45831f1c89ad363b862ae9d09e1 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 57 1.5E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_9760 9b9be45831f1c89ad363b862ae9d09e1 192 SUPERFAMILY SSF46689 4 74 3.89E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_9760 9b9be45831f1c89ad363b862ae9d09e1 192 Gene3D G3DSA:1.10.357.10 4 191 1.7E-48 T 14-10-2018 AMIS_9760 9b9be45831f1c89ad363b862ae9d09e1 192 SUPERFAMILY SSF48498 79 189 4.3E-18 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_9760 9b9be45831f1c89ad363b862ae9d09e1 192 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 81 189 3.1E-17 T 14-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal AMIS_68220 962d3d3d9f883d5809ec100072c88d98 342 Pfam PF00535 Glycosyl transferase family 2 13 174 3.8E-30 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AMIS_68220 962d3d3d9f883d5809ec100072c88d98 342 SUPERFAMILY SSF53448 11 186 2.51E-34 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_68220 962d3d3d9f883d5809ec100072c88d98 342 Gene3D G3DSA:3.90.550.10 7 214 3.1E-35 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_16580 3dd208810b6f2d406c250205ff67a644 483 Gene3D G3DSA:3.90.230.10 206 479 6.5E-74 T 14-10-2018 AMIS_16580 3dd208810b6f2d406c250205ff67a644 483 Pfam PF00557 Metallopeptidase family M24 214 450 3.0E-47 T 14-10-2018 IPR000994 Peptidase M24 AMIS_16580 3dd208810b6f2d406c250205ff67a644 483 SMART SM01011 39 177 2.1E-39 T 14-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 AMIS_16580 3dd208810b6f2d406c250205ff67a644 483 SUPERFAMILY SSF53092 41 206 6.28E-27 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AMIS_16580 3dd208810b6f2d406c250205ff67a644 483 SUPERFAMILY SSF55920 207 475 1.44E-61 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like AMIS_16580 3dd208810b6f2d406c250205ff67a644 483 Gene3D G3DSA:3.40.350.10 40 182 2.9E-21 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AMIS_16580 3dd208810b6f2d406c250205ff67a644 483 Pfam PF05195 Aminopeptidase P, N-terminal domain 42 158 7.0E-22 T 14-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 AMIS_59640 3a8296d699fd277f00fe8e7aed47d60c 271 SUPERFAMILY SSF161098 3 267 1.96E-53 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_59640 3a8296d699fd277f00fe8e7aed47d60c 271 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 263 4.5E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_59640 3a8296d699fd277f00fe8e7aed47d60c 271 Gene3D G3DSA:1.10.3720.10 3 270 1.5E-45 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_59970 26971b7a90d1efc966643aee7e106e44 275 SUPERFAMILY SSF161098 5 275 1.5E-61 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_59970 26971b7a90d1efc966643aee7e106e44 275 Gene3D G3DSA:1.10.3720.10 1 263 2.0E-55 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_59970 26971b7a90d1efc966643aee7e106e44 275 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 266 1.2E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_7610 fb1809c68a0c3064094b1a987e69c425 303 Gene3D G3DSA:3.30.420.150 123 302 2.7E-63 T 14-10-2018 AMIS_7610 fb1809c68a0c3064094b1a987e69c425 303 SUPERFAMILY SSF53067 127 301 3.99E-39 T 14-10-2018 AMIS_7610 fb1809c68a0c3064094b1a987e69c425 303 Gene3D G3DSA:3.30.420.40 1 122 1.1E-44 T 14-10-2018 AMIS_7610 fb1809c68a0c3064094b1a987e69c425 303 Pfam PF02541 Ppx/GppA phosphatase family 16 297 5.6E-61 T 14-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 AMIS_7610 fb1809c68a0c3064094b1a987e69c425 303 SUPERFAMILY SSF53067 2 123 6.36E-35 T 14-10-2018 AMIS_9210 0e31cce33df6b183c331881689130a86 432 SUPERFAMILY SSF52540 27 389 2.59E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_9210 0e31cce33df6b183c331881689130a86 432 Pfam PF13604 AAA domain 19 173 1.3E-8 T 14-10-2018 AMIS_9210 0e31cce33df6b183c331881689130a86 432 Gene3D G3DSA:3.40.50.300 9 193 1.6E-14 T 14-10-2018 AMIS_9210 0e31cce33df6b183c331881689130a86 432 Gene3D G3DSA:3.40.50.300 267 405 5.7E-12 T 14-10-2018 AMIS_58980 27056666d3685e084f646afd4ce4deda 384 SUPERFAMILY SSF51905 11 333 3.76E-9 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_58980 27056666d3685e084f646afd4ce4deda 384 Pfam PF05834 Lycopene cyclase protein 4 372 5.8E-75 T 14-10-2018 AMIS_65440 cf9379759a2203ed3bdf2e73cd1a8a03 162 Pfam PF09348 Domain of unknown function (DUF1990) 5 153 4.1E-46 T 14-10-2018 IPR018960 Domain of unknown function DUF1990 AMIS_65440 cf9379759a2203ed3bdf2e73cd1a8a03 162 PIRSF PIRSF010260 1 160 1.4E-47 T 14-10-2018 IPR014457 Uncharacterised conserved protein UCP010260 AMIS_18470 609aa4967baead494089d7a9f42363f2 479 Pfam PF03929 PepSY-associated TM region 32 410 2.9E-64 T 14-10-2018 IPR005625 PepSY-associated TM protein AMIS_45460 816e4fef3a03f331d225ef40d257271d 362 Pfam PF01261 Xylose isomerase-like TIM barrel 40 235 4.5E-14 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AMIS_45460 816e4fef3a03f331d225ef40d257271d 362 SUPERFAMILY SSF51658 35 238 2.75E-30 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily AMIS_45460 816e4fef3a03f331d225ef40d257271d 362 Gene3D G3DSA:3.20.20.150 35 281 6.1E-22 T 14-10-2018 AMIS_8880 f0f08b5e28e10538ba96dcc9f6336c10 407 Gene3D G3DSA:2.70.70.10 243 404 1.7E-44 T 14-10-2018 IPR011055 Duplicated hybrid motif AMIS_8880 f0f08b5e28e10538ba96dcc9f6336c10 407 SUPERFAMILY SSF51261 214 402 7.32E-52 T 14-10-2018 IPR011055 Duplicated hybrid motif AMIS_8880 f0f08b5e28e10538ba96dcc9f6336c10 407 Pfam PF01551 Peptidase family M23 300 398 2.5E-28 T 14-10-2018 IPR016047 Peptidase M23 AMIS_42100 433c95c4e3da7da16f49c51676f91f82 213 SUPERFAMILY SSF46689 8 82 5.49E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_42100 433c95c4e3da7da16f49c51676f91f82 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 6.6E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_42100 433c95c4e3da7da16f49c51676f91f82 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 6.6E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_42100 433c95c4e3da7da16f49c51676f91f82 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 67 1.5E-14 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_42100 433c95c4e3da7da16f49c51676f91f82 213 Gene3D G3DSA:1.10.357.10 4 200 1.7E-30 T 14-10-2018 AMIS_67840 708a3d29948994bd8ddbd3f2bdc30b9d 190 Pfam PF01590 GAF domain 38 168 7.7E-7 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_67840 708a3d29948994bd8ddbd3f2bdc30b9d 190 SMART SM00065 36 179 1.3E-6 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_67840 708a3d29948994bd8ddbd3f2bdc30b9d 190 Gene3D G3DSA:3.30.450.40 19 183 2.2E-16 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_67840 708a3d29948994bd8ddbd3f2bdc30b9d 190 SUPERFAMILY SSF55781 38 173 5.89E-22 T 14-10-2018 AMIS_30260 917a309b0bfff02663131a9044d99598 286 Pfam PF03537 Glycoside-hydrolase family GH114 57 273 5.3E-49 T 14-10-2018 IPR004352 Glycoside-hydrolase family GH114, TIM-barrel domain AMIS_30260 917a309b0bfff02663131a9044d99598 286 SUPERFAMILY SSF51445 66 253 8.53E-18 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_49560 60c190fb9c104c4a3896a6987ac472e2 121 SUPERFAMILY SSF54593 2 119 3.58E-22 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_49560 60c190fb9c104c4a3896a6987ac472e2 121 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 116 2.1E-13 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMIS_49560 60c190fb9c104c4a3896a6987ac472e2 121 Gene3D G3DSA:3.10.180.10 1 121 7.7E-23 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_35480 67fa1145e5f8db33edd638164287fc74 344 SUPERFAMILY SSF81345 14 336 4.97E-66 T 14-10-2018 IPR037294 ABC transporter, BtuC-like AMIS_35480 67fa1145e5f8db33edd638164287fc74 344 Gene3D G3DSA:1.10.3470.10 16 342 5.3E-83 T 14-10-2018 IPR037294 ABC transporter, BtuC-like AMIS_35480 67fa1145e5f8db33edd638164287fc74 344 Pfam PF01032 FecCD transport family 31 336 5.4E-74 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AMIS_9520 6798bec445fbd4dbafe226cbab6ff7fa 401 SUPERFAMILY SSF51556 16 329 1.52E-65 T 14-10-2018 IPR032466 Metal-dependent hydrolase AMIS_9520 6798bec445fbd4dbafe226cbab6ff7fa 401 Gene3D G3DSA:2.30.40.10 6 381 9.8E-132 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMIS_9520 6798bec445fbd4dbafe226cbab6ff7fa 401 SUPERFAMILY SSF51338 308 396 2.1E-13 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMIS_9520 6798bec445fbd4dbafe226cbab6ff7fa 401 TIGRFAM TIGR02022 hutF: formiminoglutamate deiminase 7 386 9.6E-127 T 14-10-2018 IPR010252 Formiminoglutamate deiminase AMIS_9520 6798bec445fbd4dbafe226cbab6ff7fa 401 Gene3D G3DSA:3.20.20.140 18 387 9.8E-132 T 14-10-2018 AMIS_9520 6798bec445fbd4dbafe226cbab6ff7fa 401 Pfam PF01979 Amidohydrolase family 13 375 1.0E-42 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AMIS_65130 3ac9c045f73c465b574318458c21e4cc 157 SUPERFAMILY SSF102405 4 153 2.2E-13 T 14-10-2018 AMIS_76380 bd7cce5d96ce9400149c886b4c581069 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 130 149 1.7E-60 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMIS_76380 bd7cce5d96ce9400149c886b4c581069 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 110 130 1.7E-60 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMIS_76380 bd7cce5d96ce9400149c886b4c581069 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 239 260 1.7E-60 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMIS_76380 bd7cce5d96ce9400149c886b4c581069 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 91 110 1.7E-60 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMIS_76380 bd7cce5d96ce9400149c886b4c581069 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 218 238 1.7E-60 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMIS_76380 bd7cce5d96ce9400149c886b4c581069 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 263 288 1.7E-60 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMIS_76380 bd7cce5d96ce9400149c886b4c581069 289 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 94 289 5.8E-75 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AMIS_76380 bd7cce5d96ce9400149c886b4c581069 289 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 266 278 - T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMIS_76380 bd7cce5d96ce9400149c886b4c581069 289 Pfam PF00813 FliP family 94 285 3.3E-73 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMIS_40610 08b7b1954e6bad8f8eada0b995201adf 311 Gene3D G3DSA:3.40.50.1820 1 307 9.5E-67 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_40610 08b7b1954e6bad8f8eada0b995201adf 311 Pfam PF00561 alpha/beta hydrolase fold 27 158 9.7E-19 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_40610 08b7b1954e6bad8f8eada0b995201adf 311 SUPERFAMILY SSF53474 3 307 2.88E-56 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_50850 015baf58dc5185ab42a9935a27b1a1f8 291 SUPERFAMILY SSF56219 88 289 1.7E-23 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AMIS_50850 015baf58dc5185ab42a9935a27b1a1f8 291 Gene3D G3DSA:3.60.10.10 77 291 1.9E-28 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AMIS_50850 015baf58dc5185ab42a9935a27b1a1f8 291 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 90 282 4.0E-10 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase AMIS_40760 f37608d6392fb70fbe6dc29747bbe861 149 Gene3D G3DSA:2.40.350.10 14 149 3.8E-35 T 14-10-2018 IPR023159 SO1590-like superfamily AMIS_40760 f37608d6392fb70fbe6dc29747bbe861 149 Pfam PF11528 Protein of unknown function (DUF3224) 18 146 6.4E-37 T 14-10-2018 IPR021607 Protein of unknown function DUF3224 AMIS_40760 f37608d6392fb70fbe6dc29747bbe861 149 SUPERFAMILY SSF159238 16 148 6.15E-37 T 14-10-2018 IPR023159 SO1590-like superfamily AMIS_65810 26c2e9b560e1734bfa57f36307d83d79 275 Gene3D G3DSA:3.40.50.150 17 223 2.4E-31 T 14-10-2018 AMIS_65810 26c2e9b560e1734bfa57f36307d83d79 275 Pfam PF08241 Methyltransferase domain 58 153 1.2E-17 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 AMIS_65810 26c2e9b560e1734bfa57f36307d83d79 275 SUPERFAMILY SSF53335 34 215 1.56E-30 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_46320 4ae5178c23edbafbed1f11098e439e98 429 PRINTS PR00412 Epoxide hydrolase signature 402 424 1.3E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_46320 4ae5178c23edbafbed1f11098e439e98 429 PRINTS PR00412 Epoxide hydrolase signature 171 186 1.3E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_46320 4ae5178c23edbafbed1f11098e439e98 429 PRINTS PR00412 Epoxide hydrolase signature 370 386 1.3E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_46320 4ae5178c23edbafbed1f11098e439e98 429 PRINTS PR00412 Epoxide hydrolase signature 142 160 1.3E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_46320 4ae5178c23edbafbed1f11098e439e98 429 Pfam PF06441 Epoxide hydrolase N terminus 46 150 9.5E-34 T 14-10-2018 IPR010497 Epoxide hydrolase, N-terminal Reactome: R-HSA-211945 AMIS_46320 4ae5178c23edbafbed1f11098e439e98 429 SUPERFAMILY SSF53474 40 428 1.11E-89 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_46320 4ae5178c23edbafbed1f11098e439e98 429 Gene3D G3DSA:3.40.50.1820 44 429 4.1E-125 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_46320 4ae5178c23edbafbed1f11098e439e98 429 PIRSF PIRSF001112 2 429 1.5E-133 T 14-10-2018 IPR016292 Epoxide hydrolase GO:0033961 Reactome: R-HSA-211945 AMIS_1730 5309409998dca8f555c9ab9662b08adf 179 Pfam PF03551 Transcriptional regulator PadR-like family 7 80 5.1E-16 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal AMIS_1730 5309409998dca8f555c9ab9662b08adf 179 Gene3D G3DSA:1.10.10.10 1 87 8.9E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_1730 5309409998dca8f555c9ab9662b08adf 179 SUPERFAMILY SSF46785 3 170 3.37E-33 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_59750 459accffc99e476d60a10b96bee6a9a0 304 Pfam PF02628 Cytochrome oxidase assembly protein 11 275 1.8E-14 T 14-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 AMIS_44130 c138840f11fc0e7c29978040583034ae 229 Pfam PF10099 Anti-sigma-K factor rskA 59 225 1.3E-22 T 14-10-2018 IPR018764 Anti-sigma K factor RskA GO:0005886|GO:0016021 AMIS_11430 00b2058c9d08476bcb180052c077571a 972 Gene3D G3DSA:2.40.50.140 369 459 1.9E-26 T 14-10-2018 AMIS_11430 00b2058c9d08476bcb180052c077571a 972 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 351 750 7.2E-150 T 14-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 AMIS_11430 00b2058c9d08476bcb180052c077571a 972 SMART SM00316 374 453 6.9E-5 T 14-10-2018 IPR022967 RNA-binding domain, S1 AMIS_11430 00b2058c9d08476bcb180052c077571a 972 Pfam PF10150 Ribonuclease E/G family 456 724 4.6E-103 T 14-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 AMIS_11430 00b2058c9d08476bcb180052c077571a 972 SUPERFAMILY SSF50249 376 459 6.55E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMIS_78720 7eb80d98eacda14b5ac66c92c734be0e 153 Pfam PF05331 Protein of unknown function (DUF742) 46 151 3.9E-26 T 14-10-2018 IPR007995 Protein of unknown function DUF742 AMIS_28150 97b4a64b14de93ba758ba3f55a1d6ac4 1068 TIGRFAM TIGR03769 P_ac_wall_RPT: actinobacterial surface-anchored protein domain 180 219 2.2E-12 T 14-10-2018 IPR022435 Surface-anchored repeat, actinobacteria AMIS_2230 110f96a9ad0226d9a175ce00e4d1c234 86 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 80 9.9E-20 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_2230 110f96a9ad0226d9a175ce00e4d1c234 86 SMART SM00345 21 80 1.4E-19 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMIS_2230 110f96a9ad0226d9a175ce00e4d1c234 86 Gene3D G3DSA:1.10.10.10 13 84 9.6E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_2230 110f96a9ad0226d9a175ce00e4d1c234 86 SUPERFAMILY SSF46785 16 82 2.78E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_37530 f27d8c33785145fba046ce53c39c7cdb 139 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 15 129 2.2E-34 T 14-10-2018 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III AMIS_27800 fa074c795204752a2ca9994061e7f3f3 130 Gene3D G3DSA:3.40.800.10 1 130 4.7E-46 T 14-10-2018 AMIS_27800 fa074c795204752a2ca9994061e7f3f3 130 Pfam PF00491 Arginase family 11 122 6.6E-39 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 AMIS_27800 fa074c795204752a2ca9994061e7f3f3 130 SUPERFAMILY SSF52768 13 128 8.1E-39 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily AMIS_27800 fa074c795204752a2ca9994061e7f3f3 130 ProSitePatterns PS01053 Arginase family signature. 54 75 - T 14-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 AMIS_69000 0926468d7f9789f9fc5ee6011cfb6c06 402 Pfam PF03993 Domain of Unknown Function (DUF349) 248 320 1.8E-22 T 14-10-2018 IPR007139 Protein of unknown function DUF349 AMIS_69000 0926468d7f9789f9fc5ee6011cfb6c06 402 Pfam PF03993 Domain of Unknown Function (DUF349) 170 242 2.6E-19 T 14-10-2018 IPR007139 Protein of unknown function DUF349 AMIS_69000 0926468d7f9789f9fc5ee6011cfb6c06 402 Pfam PF03993 Domain of Unknown Function (DUF349) 93 166 3.5E-13 T 14-10-2018 IPR007139 Protein of unknown function DUF349 AMIS_42010 28ccf9c3b837666787a759d907236b87 331 SUPERFAMILY SSF51430 13 327 1.57E-88 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMIS_42010 28ccf9c3b837666787a759d907236b87 331 Gene3D G3DSA:3.20.20.100 15 330 2.7E-110 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMIS_42010 28ccf9c3b837666787a759d907236b87 331 Pfam PF00248 Aldo/keto reductase family 28 327 1.8E-66 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain AMIS_62610 09aef6f72a68e4b85ec09d5769e499c3 290 Hamap MF_01384 Urease accessory protein UreD [ureD]. 1 270 15.907 T 14-10-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 AMIS_62610 09aef6f72a68e4b85ec09d5769e499c3 290 Pfam PF01774 UreD urease accessory protein 43 258 7.3E-26 T 14-10-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 AMIS_74820 af62f9982d757d486fa5beae8db18607 238 Gene3D G3DSA:3.40.140.10 1 129 3.8E-43 T 14-10-2018 AMIS_74820 af62f9982d757d486fa5beae8db18607 238 SUPERFAMILY SSF53927 4 127 3.9E-36 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AMIS_74820 af62f9982d757d486fa5beae8db18607 238 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 11 99 2.3E-8 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain AMIS_24370 2722bb1eb7490a96bee04df2ac5ce427 729 Pfam PF08757 CotH kinase protein 404 706 3.5E-31 T 14-10-2018 IPR014867 Spore coat protein CotH AMIS_10950 bf6012a48e7b9516d1ede2cb36875fb7 421 Pfam PF17164 Domain of unknown function (DUF5122) beta-propeller 165 197 4.2E-4 T 14-10-2018 IPR013431 Delta-60 repeat AMIS_10950 bf6012a48e7b9516d1ede2cb36875fb7 421 SUPERFAMILY SSF82171 84 329 1.39E-8 T 14-10-2018 AMIS_8620 d9c7dc251a25e2ff8530b92c47991da3 507 Gene3D G3DSA:3.40.605.10 24 493 1.0E-159 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AMIS_8620 d9c7dc251a25e2ff8530b92c47991da3 507 SUPERFAMILY SSF53720 15 500 1.7E-159 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMIS_8620 d9c7dc251a25e2ff8530b92c47991da3 507 Pfam PF00171 Aldehyde dehydrogenase family 31 494 4.4E-161 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AMIS_8620 d9c7dc251a25e2ff8530b92c47991da3 507 Gene3D G3DSA:3.40.309.10 267 465 1.0E-159 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AMIS_8620 d9c7dc251a25e2ff8530b92c47991da3 507 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 295 306 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AMIS_8620 d9c7dc251a25e2ff8530b92c47991da3 507 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 262 269 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AMIS_34840 adc7044da5e556bd16e7165c4b954eb9 797 SUPERFAMILY SSF82866 199 405 1.22E-23 T 14-10-2018 AMIS_34840 adc7044da5e556bd16e7165c4b954eb9 797 Pfam PF03176 MMPL family 511 760 9.6E-31 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 AMIS_34840 adc7044da5e556bd16e7165c4b954eb9 797 Pfam PF03176 MMPL family 46 411 7.0E-44 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 AMIS_34840 adc7044da5e556bd16e7165c4b954eb9 797 SUPERFAMILY SSF82866 524 759 2.22E-25 T 14-10-2018 AMIS_51710 8383f0d8cef15c60c4df81a3c615e8b6 234 Gene3D G3DSA:1.10.10.10 134 234 2.1E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_51710 8383f0d8cef15c60c4df81a3c615e8b6 234 Gene3D G3DSA:3.40.50.2300 2 133 8.1E-39 T 14-10-2018 AMIS_51710 8383f0d8cef15c60c4df81a3c615e8b6 234 SUPERFAMILY SSF52172 6 130 2.7E-41 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_51710 8383f0d8cef15c60c4df81a3c615e8b6 234 SMART SM00448 6 121 2.1E-42 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_51710 8383f0d8cef15c60c4df81a3c615e8b6 234 SMART SM00862 155 231 1.7E-26 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_51710 8383f0d8cef15c60c4df81a3c615e8b6 234 Pfam PF00072 Response regulator receiver domain 8 122 3.3E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_51710 8383f0d8cef15c60c4df81a3c615e8b6 234 SUPERFAMILY SSF46894 131 232 3.74E-29 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_51710 8383f0d8cef15c60c4df81a3c615e8b6 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 231 3.4E-26 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_80090 4a6b1d1a305bc1f4adb867042a78788e 133 Pfam PF10756 Bacterial PH domain 57 132 1.3E-12 T 14-10-2018 IPR019692 Protein of unknown function DUF2581 AMIS_27440 a037706391d9ecfc1b62864a202a7185 398 Gene3D G3DSA:3.30.565.10 277 396 5.8E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_27440 a037706391d9ecfc1b62864a202a7185 398 SMART SM00387 308 398 6.3E-5 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_27440 a037706391d9ecfc1b62864a202a7185 398 Pfam PF07730 Histidine kinase 201 267 9.4E-17 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMIS_27440 a037706391d9ecfc1b62864a202a7185 398 SUPERFAMILY SSF55874 283 395 1.42E-14 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_37560 9f2321dfb451edfa762ccdfc9d4dda35 196 SUPERFAMILY SSF52980 17 184 1.34E-22 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AMIS_37560 9f2321dfb451edfa762ccdfc9d4dda35 196 Pfam PF05685 Putative restriction endonuclease 24 187 5.2E-23 T 14-10-2018 IPR008538 Domain of unknown function DUF820 AMIS_37560 9f2321dfb451edfa762ccdfc9d4dda35 196 Gene3D G3DSA:3.90.1570.10 16 173 2.9E-17 T 14-10-2018 AMIS_40070 2b1a2eae2f2db4444f657a4895afa0d5 315 Gene3D G3DSA:3.40.50.1820 75 312 8.6E-44 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_40070 2b1a2eae2f2db4444f657a4895afa0d5 315 SUPERFAMILY SSF53474 78 310 2.28E-30 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_40070 2b1a2eae2f2db4444f657a4895afa0d5 315 Pfam PF00756 Putative esterase 84 271 3.6E-18 T 14-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 AMIS_71410 f1300ac8a1b819da89c5b6085ddf9964 362 Gene3D G3DSA:2.30.30.280 209 274 8.2E-14 T 14-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 AMIS_71410 f1300ac8a1b819da89c5b6085ddf9964 362 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1 352 5.2E-82 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 AMIS_71410 f1300ac8a1b819da89c5b6085ddf9964 362 SUPERFAMILY SSF52402 1 240 7.12E-45 T 14-10-2018 AMIS_71410 f1300ac8a1b819da89c5b6085ddf9964 362 Gene3D G3DSA:3.40.50.620 1 207 5.1E-69 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMIS_71410 f1300ac8a1b819da89c5b6085ddf9964 362 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 1 353 35.5 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 AMIS_71410 f1300ac8a1b819da89c5b6085ddf9964 362 Gene3D G3DSA:2.40.30.10 277 360 5.5E-9 T 14-10-2018 AMIS_71410 f1300ac8a1b819da89c5b6085ddf9964 362 Pfam PF03054 tRNA methyl transferase 1 352 2.6E-109 T 14-10-2018 AMIS_41410 0e147179526eadcc69142cd73b6fc174 243 SUPERFAMILY SSF55729 11 217 1.44E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_41410 0e147179526eadcc69142cd73b6fc174 243 Pfam PF13302 Acetyltransferase (GNAT) domain 19 211 1.1E-15 T 14-10-2018 IPR000182 GNAT domain AMIS_37020 596921d534559938de7e54e8a8f14d14 307 Gene3D G3DSA:2.40.30.10 2 137 3.3E-37 T 14-10-2018 AMIS_37020 596921d534559938de7e54e8a8f14d14 307 Gene3D G3DSA:3.40.50.80 150 235 3.2E-21 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMIS_37020 596921d534559938de7e54e8a8f14d14 307 Gene3D G3DSA:3.40.50.80 246 307 3.3E-11 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMIS_37020 596921d534559938de7e54e8a8f14d14 307 SUPERFAMILY SSF63380 5 139 1.47E-10 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AMIS_37020 596921d534559938de7e54e8a8f14d14 307 Pfam PF04954 Siderophore-interacting protein 154 303 2.6E-38 T 14-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain AMIS_37020 596921d534559938de7e54e8a8f14d14 307 Pfam PF08021 Siderophore-interacting FAD-binding domain 20 136 5.7E-35 T 14-10-2018 IPR013113 FAD-binding 9, siderophore-interacting AMIS_76750 0a08646a0af19918fb78fd8a109754e8 199 SUPERFAMILY SSF50814 35 197 1.26E-38 T 14-10-2018 IPR012674 Calycin AMIS_76750 0a08646a0af19918fb78fd8a109754e8 199 Gene3D G3DSA:2.40.128.20 13 199 4.0E-59 T 14-10-2018 IPR012674 Calycin AMIS_76750 0a08646a0af19918fb78fd8a109754e8 199 Hamap MF_01297 UPF0678 fatty acid-binding protein-like protein . 33 198 29.672 T 14-10-2018 IPR022939 Uncharacterised protein family UPF0678 AMIS_76750 0a08646a0af19918fb78fd8a109754e8 199 Pfam PF08768 Domain of unknown function (DUF1794) 41 196 1.0E-40 T 14-10-2018 IPR014878 Domain of unknown function DUF1794 AMIS_51670 aae7175e2ec48824a71bb21825bb9cd3 960 SUPERFAMILY SSF81901 772 874 1.7E-5 T 14-10-2018 AMIS_51670 aae7175e2ec48824a71bb21825bb9cd3 960 Gene3D G3DSA:1.25.40.10 666 878 5.2E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_58020 b89c14f76adbd46c0cd134661ef08722 77 Pfam PF17032 zinc-ribbon family 19 68 1.4E-9 T 14-10-2018 IPR031493 Zinc-ribbon 15 AMIS_29010 0257a0e191d0dd6581a9c0a8f15296ec 179 SMART SM00418 16 95 6.3E-4 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_29010 0257a0e191d0dd6581a9c0a8f15296ec 179 Gene3D G3DSA:1.10.10.10 8 90 6.4E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_29010 0257a0e191d0dd6581a9c0a8f15296ec 179 Pfam PF12840 Helix-turn-helix domain 16 73 3.4E-13 T 14-10-2018 AMIS_29010 0257a0e191d0dd6581a9c0a8f15296ec 179 SUPERFAMILY SSF46785 11 91 1.08E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_370 e9cb294ade0a3e05a0530ec88d8e1356 74 Pfam PF04149 Domain of unknown function (DUF397) 15 68 5.0E-23 T 14-10-2018 IPR007278 Domain of unknown function DUF397 AMIS_36470 c8085f5455886054e15d079b3e0e180d 533 Pfam PF00561 alpha/beta hydrolase fold 93 462 3.6E-26 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_36470 c8085f5455886054e15d079b3e0e180d 533 SUPERFAMILY SSF53474 93 454 2.07E-19 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_43390 796156ccb3ed6ccb48f2966eb4ed51fc 279 Pfam PF01734 Patatin-like phospholipase 8 198 3.9E-11 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 AMIS_43390 796156ccb3ed6ccb48f2966eb4ed51fc 279 SUPERFAMILY SSF52151 7 207 3.92E-27 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMIS_43390 796156ccb3ed6ccb48f2966eb4ed51fc 279 Gene3D G3DSA:3.40.1090.10 4 69 2.6E-7 T 14-10-2018 AMIS_43390 796156ccb3ed6ccb48f2966eb4ed51fc 279 Gene3D G3DSA:3.40.1090.10 118 220 3.1E-13 T 14-10-2018 AMIS_47380 355fc29053fb444cbaef9bd87f155267 300 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 87 146 3.0E-9 T 14-10-2018 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AMIS_47380 355fc29053fb444cbaef9bd87f155267 300 SUPERFAMILY SSF55931 47 297 5.3E-29 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AMIS_47380 355fc29053fb444cbaef9bd87f155267 300 Gene3D G3DSA:3.30.590.20 19 158 1.3E-18 T 14-10-2018 AMIS_47380 355fc29053fb444cbaef9bd87f155267 300 Gene3D G3DSA:3.30.590.20 159 299 6.1E-22 T 14-10-2018 AMIS_13780 1c9a59064036f9c507924382c9b34777 230 Pfam PF13829 Domain of unknown function (DUF4191) 11 221 1.2E-73 T 14-10-2018 IPR025445 Protein of unknown function DUF4191 AMIS_13780 1c9a59064036f9c507924382c9b34777 230 ProDom PD037701 MEMBRANE INTEGRAL TRANSMEMBRANE RV2219/MT2276 NARROWLY PROBABLE PRECURSOR SIGNAL MLCB22.21 13 214 5.0E-44 T 14-10-2018 AMIS_4090 107ea98dee1ae27f73745fc08538d46b 162 Pfam PF05995 Cysteine dioxygenase type I 19 143 5.6E-29 T 14-10-2018 IPR010300 Cysteine dioxygenase type I GO:0005506|GO:0016702|GO:0055114 KEGG: 00270+1.13.11.20|KEGG: 00430+1.13.11.20|MetaCyc: PWY-5331|Reactome: R-HSA-1614558 AMIS_4090 107ea98dee1ae27f73745fc08538d46b 162 Gene3D G3DSA:2.60.120.10 15 147 2.3E-26 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMIS_4090 107ea98dee1ae27f73745fc08538d46b 162 SUPERFAMILY SSF51182 17 146 3.04E-31 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily AMIS_45940 5d3f775ceb14b502cb8f87548e869d07 341 SUPERFAMILY SSF56059 108 321 3.77E-8 T 14-10-2018 AMIS_56400 068ff87781aa0d6946b4dc6efb1ab561 289 Pfam PF00892 EamA-like transporter family 157 287 7.4E-11 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMIS_56400 068ff87781aa0d6946b4dc6efb1ab561 289 SUPERFAMILY SSF103481 37 132 5.89E-5 T 14-10-2018 AMIS_56400 068ff87781aa0d6946b4dc6efb1ab561 289 SUPERFAMILY SSF103481 192 288 3.01E-8 T 14-10-2018 AMIS_890 57d9416d7272f0c4d99db7a966a9e941 164 Pfam PF02080 TrkA-C domain 91 159 8.4E-15 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AMIS_890 57d9416d7272f0c4d99db7a966a9e941 164 SUPERFAMILY SSF116726 87 159 2.09E-16 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AMIS_890 57d9416d7272f0c4d99db7a966a9e941 164 Gene3D G3DSA:3.30.70.1450 89 162 9.6E-17 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AMIS_890 57d9416d7272f0c4d99db7a966a9e941 164 PIRSF PIRSF005028 1 163 2.2E-62 T 14-10-2018 IPR026278 Potassium/proton antiporter subunit KhtT AMIS_26530 9e8129f38ceae1fb7d3ba66129d32681 417 Pfam PF07730 Histidine kinase 227 293 2.9E-12 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMIS_26530 9e8129f38ceae1fb7d3ba66129d32681 417 SUPERFAMILY SSF55874 302 414 3.65E-9 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_26530 9e8129f38ceae1fb7d3ba66129d32681 417 Gene3D G3DSA:3.30.565.10 296 414 2.1E-20 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_26530 9e8129f38ceae1fb7d3ba66129d32681 417 Pfam PF13796 Putative sensor 30 198 1.4E-15 T 14-10-2018 IPR025828 Putative sensor domain AMIS_3970 0e1a670aa9c191915027d97cc48c9ee3 637 Gene3D G3DSA:1.20.120.1760 210 437 8.2E-28 T 14-10-2018 AMIS_3970 0e1a670aa9c191915027d97cc48c9ee3 637 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 284 306 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AMIS_3970 0e1a670aa9c191915027d97cc48c9ee3 637 Pfam PF01066 CDP-alcohol phosphatidyltransferase 240 306 1.9E-6 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AMIS_21800 193dd1a9dc11f08722a94a11da0457c1 343 TIGRFAM TIGR03559 F420_Rv3520c: probable F420-dependent oxidoreductase, Rv3520c family 2 322 1.8E-134 T 14-10-2018 IPR019951 F420-dependent oxidoreductase-predicted, Rv3520c AMIS_21800 193dd1a9dc11f08722a94a11da0457c1 343 Pfam PF00296 Luciferase-like monooxygenase 9 317 5.7E-70 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMIS_21800 193dd1a9dc11f08722a94a11da0457c1 343 SUPERFAMILY SSF51679 1 332 7.72E-61 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_21800 193dd1a9dc11f08722a94a11da0457c1 343 Gene3D G3DSA:3.20.20.30 1 339 2.4E-71 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_16920 69a188cddeb1f6ed4d01c684c76be137 324 Pfam PF01380 SIS domain 166 294 4.0E-19 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AMIS_16920 69a188cddeb1f6ed4d01c684c76be137 324 SUPERFAMILY SSF46689 39 109 7.17E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_16920 69a188cddeb1f6ed4d01c684c76be137 324 Gene3D G3DSA:3.40.50.10490 132 318 3.8E-45 T 14-10-2018 AMIS_16920 69a188cddeb1f6ed4d01c684c76be137 324 SUPERFAMILY SSF53697 133 299 6.68E-38 T 14-10-2018 AMIS_16920 69a188cddeb1f6ed4d01c684c76be137 324 Pfam PF01418 Helix-turn-helix domain, rpiR family 39 109 7.7E-13 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AMIS_16920 69a188cddeb1f6ed4d01c684c76be137 324 Gene3D G3DSA:1.10.10.10 33 116 7.7E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_29570 741193c2ac7840ac479eda81d41180a9 440 Pfam PF13546 DDE superfamily endonuclease 35 242 2.0E-51 T 14-10-2018 IPR038721 Transposase IS701-like, DDE domain AMIS_29570 741193c2ac7840ac479eda81d41180a9 440 SUPERFAMILY SSF53098 57 377 1.29E-18 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily AMIS_65290 ffbbc95ad623fe5da4e6717633b62e92 124 Pfam PF09656 Putative transmembrane protein (PGPGW) 18 70 1.2E-21 T 14-10-2018 IPR019099 Uncharacterised protein family PGPGW, transmembrane AMIS_65290 ffbbc95ad623fe5da4e6717633b62e92 124 TIGRFAM TIGR02611 TIGR02611: TIGR02611 family protein 15 112 1.1E-24 T 14-10-2018 IPR013434 Conserved hypothetical protein CHP02611 AMIS_51620 bea2e565bb3c40aeb8f8f91268663c98 292 Gene3D G3DSA:3.40.50.720 3 267 1.1E-36 T 14-10-2018 AMIS_51620 bea2e565bb3c40aeb8f8f91268663c98 292 Pfam PF00899 ThiF family 20 225 1.3E-26 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AMIS_51620 bea2e565bb3c40aeb8f8f91268663c98 292 SUPERFAMILY SSF69572 21 269 7.46E-33 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 AMIS_47550 8a63ee31383ef37ad2fa1658221143b5 536 SUPERFAMILY SSF56317 226 499 1.2E-35 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AMIS_47550 8a63ee31383ef37ad2fa1658221143b5 536 Pfam PF00795 Carbon-nitrogen hydrolase 233 485 3.1E-13 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 AMIS_47550 8a63ee31383ef37ad2fa1658221143b5 536 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 26 505 15.254 T 14-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 AMIS_47550 8a63ee31383ef37ad2fa1658221143b5 536 Gene3D G3DSA:3.60.110.10 246 508 7.4E-15 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AMIS_47550 8a63ee31383ef37ad2fa1658221143b5 536 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 73 467 2.9E-73 T 14-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 AMIS_55480 b43e8527c638ffe925825a10f5a30e98 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 108 314 6.1E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_55480 b43e8527c638ffe925825a10f5a30e98 320 Gene3D G3DSA:1.10.3720.10 72 315 2.6E-47 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_55480 b43e8527c638ffe925825a10f5a30e98 320 SUPERFAMILY SSF161098 76 304 1.05E-40 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_66480 71ac4a867a249b97884d405745ab59c8 383 Pfam PF01266 FAD dependent oxidoreductase 5 360 4.3E-47 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AMIS_66480 71ac4a867a249b97884d405745ab59c8 383 SUPERFAMILY SSF51905 4 379 9.06E-45 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_66480 71ac4a867a249b97884d405745ab59c8 383 Gene3D G3DSA:3.50.50.60 5 374 8.8E-117 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_66480 71ac4a867a249b97884d405745ab59c8 383 Gene3D G3DSA:3.30.9.10 60 325 8.8E-117 T 14-10-2018 AMIS_66480 71ac4a867a249b97884d405745ab59c8 383 SUPERFAMILY SSF54373 217 321 1.47E-19 T 14-10-2018 AMIS_32210 e0dbb95292db716dc920548a44b8f927 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 131 159 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMIS_32210 e0dbb95292db716dc920548a44b8f927 247 SUPERFAMILY SSF51735 2 242 5.72E-48 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_32210 e0dbb95292db716dc920548a44b8f927 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 163 2.2E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_32210 e0dbb95292db716dc920548a44b8f927 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 124 132 2.2E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_32210 e0dbb95292db716dc920548a44b8f927 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 67 78 2.2E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_32210 e0dbb95292db716dc920548a44b8f927 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 67 78 3.4E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_32210 e0dbb95292db716dc920548a44b8f927 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 3.4E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_32210 e0dbb95292db716dc920548a44b8f927 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 144 163 3.4E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_32210 e0dbb95292db716dc920548a44b8f927 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 182 3.4E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_32210 e0dbb95292db716dc920548a44b8f927 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 118 134 3.4E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_32210 e0dbb95292db716dc920548a44b8f927 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 3.4E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_32210 e0dbb95292db716dc920548a44b8f927 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 240 1.1E-34 T 14-10-2018 AMIS_32210 e0dbb95292db716dc920548a44b8f927 247 Gene3D G3DSA:3.40.50.720 1 246 9.8E-49 T 14-10-2018 AMIS_26100 e7932239c9783e922f52ddafba69c10e 263 SUPERFAMILY SSF51735 1 259 2.12E-61 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_26100 e7932239c9783e922f52ddafba69c10e 263 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMIS_26100 e7932239c9783e922f52ddafba69c10e 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.5E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_26100 e7932239c9783e922f52ddafba69c10e 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 1.5E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_26100 e7932239c9783e922f52ddafba69c10e 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 1.5E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_26100 e7932239c9783e922f52ddafba69c10e 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 5.0E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_26100 e7932239c9783e922f52ddafba69c10e 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 5.0E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_26100 e7932239c9783e922f52ddafba69c10e 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 5.0E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_26100 e7932239c9783e922f52ddafba69c10e 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 5.0E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_26100 e7932239c9783e922f52ddafba69c10e 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 5.0E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_26100 e7932239c9783e922f52ddafba69c10e 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 242 5.0E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_26100 e7932239c9783e922f52ddafba69c10e 263 Gene3D G3DSA:3.40.50.720 1 261 8.7E-66 T 14-10-2018 AMIS_26100 e7932239c9783e922f52ddafba69c10e 263 Pfam PF00106 short chain dehydrogenase 8 194 2.8E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_31820 7084961990428280f774cfd1e9b97ee0 399 Gene3D G3DSA:1.20.1250.20 15 387 1.0E-26 T 14-10-2018 AMIS_31820 7084961990428280f774cfd1e9b97ee0 399 Pfam PF07690 Major Facilitator Superfamily 30 292 4.8E-10 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_31820 7084961990428280f774cfd1e9b97ee0 399 SUPERFAMILY SSF103473 16 396 5.49E-32 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_57130 404b7007984dd68f0338ddc368b7d5bc 155 SUPERFAMILY SSF54637 1 149 7.94E-45 T 14-10-2018 IPR029069 HotDog domain superfamily AMIS_57130 404b7007984dd68f0338ddc368b7d5bc 155 Gene3D G3DSA:3.10.129.10 1 147 1.4E-48 T 14-10-2018 AMIS_57130 404b7007984dd68f0338ddc368b7d5bc 155 Pfam PF01575 MaoC like domain 11 123 4.6E-15 T 14-10-2018 IPR002539 MaoC-like dehydratase domain AMIS_68540 75c544edb7d54f2bb5bf6872ae6ec7f3 98 Pfam PF13834 Domain of unknown function (DUF4193) 1 98 3.6E-41 T 14-10-2018 IPR025242 Protein of unknown function DUF4193 AMIS_18890 07342aacf7c38c6a17295ddcb5e5bb57 261 SUPERFAMILY SSF51621 3 244 1.66E-55 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AMIS_18890 07342aacf7c38c6a17295ddcb5e5bb57 261 Pfam PF13714 Phosphoenolpyruvate phosphomutase 4 237 8.9E-68 T 14-10-2018 AMIS_18890 07342aacf7c38c6a17295ddcb5e5bb57 261 Gene3D G3DSA:3.20.20.60 1 259 4.3E-64 T 14-10-2018 AMIS_71650 589efb934e2279a2b48e74b27149f1ec 445 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 335 350 5.8E-13 T 14-10-2018 AMIS_71650 589efb934e2279a2b48e74b27149f1ec 445 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 5.8E-13 T 14-10-2018 AMIS_71650 589efb934e2279a2b48e74b27149f1ec 445 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 350 366 5.8E-13 T 14-10-2018 AMIS_71650 589efb934e2279a2b48e74b27149f1ec 445 Gene3D G3DSA:3.30.9.30 268 327 1.6E-31 T 14-10-2018 AMIS_71650 589efb934e2279a2b48e74b27149f1ec 445 Pfam PF01494 FAD binding domain 271 396 1.7E-12 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 AMIS_71650 589efb934e2279a2b48e74b27149f1ec 445 Pfam PF01494 FAD binding domain 7 169 2.3E-11 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 AMIS_71650 589efb934e2279a2b48e74b27149f1ec 445 SUPERFAMILY SSF51905 5 420 5.54E-57 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_71650 589efb934e2279a2b48e74b27149f1ec 445 Gene3D G3DSA:3.50.50.60 328 398 1.6E-31 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_71650 589efb934e2279a2b48e74b27149f1ec 445 Gene3D G3DSA:3.50.50.60 8 175 1.1E-37 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_71650 589efb934e2279a2b48e74b27149f1ec 445 Gene3D G3DSA:3.30.9.30 40 236 1.1E-37 T 14-10-2018 AMIS_39070 25f42a2a74758c8a393684857f44986a 433 Pfam PF07690 Major Facilitator Superfamily 17 230 8.4E-29 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_39070 25f42a2a74758c8a393684857f44986a 433 Pfam PF07690 Major Facilitator Superfamily 236 376 5.1E-10 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_39070 25f42a2a74758c8a393684857f44986a 433 PRINTS PR01035 Tetracycline resistance protein signature 164 184 4.7E-14 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMIS_39070 25f42a2a74758c8a393684857f44986a 433 PRINTS PR01035 Tetracycline resistance protein signature 136 158 4.7E-14 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMIS_39070 25f42a2a74758c8a393684857f44986a 433 PRINTS PR01035 Tetracycline resistance protein signature 22 38 4.7E-14 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMIS_39070 25f42a2a74758c8a393684857f44986a 433 Gene3D G3DSA:1.20.1250.20 6 381 1.8E-52 T 14-10-2018 AMIS_39070 25f42a2a74758c8a393684857f44986a 433 SUPERFAMILY SSF103473 9 381 9.42E-54 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_42560 97e14b81dd0cab575a869b5a579c59ec 319 Pfam PF00892 EamA-like transporter family 8 143 4.0E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMIS_42560 97e14b81dd0cab575a869b5a579c59ec 319 Pfam PF00892 EamA-like transporter family 154 295 2.8E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMIS_42560 97e14b81dd0cab575a869b5a579c59ec 319 SUPERFAMILY SSF103481 44 146 1.57E-11 T 14-10-2018 AMIS_42560 97e14b81dd0cab575a869b5a579c59ec 319 SUPERFAMILY SSF103481 221 296 4.45E-10 T 14-10-2018 AMIS_720 9671e9646893be1d508a2a3d3f7dc273 251 Gene3D G3DSA:3.20.20.370 2 250 9.5E-98 T 14-10-2018 AMIS_720 9671e9646893be1d508a2a3d3f7dc273 251 SUPERFAMILY SSF88713 3 242 6.45E-93 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AMIS_720 9671e9646893be1d508a2a3d3f7dc273 251 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 2 246 42.809 T 14-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 AMIS_720 9671e9646893be1d508a2a3d3f7dc273 251 Pfam PF03746 LamB/YcsF family 4 241 2.9E-99 T 14-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 AMIS_49190 4dc436da049de02fd836db3e68ff9f4c 412 Pfam PF13416 Bacterial extracellular solute-binding protein 43 353 1.1E-35 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein AMIS_49190 4dc436da049de02fd836db3e68ff9f4c 412 Gene3D G3DSA:3.40.190.10 14 403 3.0E-67 T 14-10-2018 AMIS_49190 4dc436da049de02fd836db3e68ff9f4c 412 SUPERFAMILY SSF53850 2 398 4.68E-64 T 14-10-2018 AMIS_78510 5de63ddf020790a1fad97c33fb34db6c 107 Gene3D G3DSA:3.30.1310.10 4 107 3.6E-36 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily AMIS_78510 5de63ddf020790a1fad97c33fb34db6c 107 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 7 101 20.641 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AMIS_78510 5de63ddf020790a1fad97c33fb34db6c 107 SUPERFAMILY SSF82607 13 107 7.32E-30 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily AMIS_78510 5de63ddf020790a1fad97c33fb34db6c 107 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 5 95 8.3E-26 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AMIS_78510 5de63ddf020790a1fad97c33fb34db6c 107 Pfam PF02575 YbaB/EbfC DNA-binding family 13 102 1.7E-32 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AMIS_78510 5de63ddf020790a1fad97c33fb34db6c 107 PIRSF PIRSF004555 5 107 2.4E-34 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AMIS_15840 4f1098f319f27b8c688098f14f547c29 103 Pfam PF11338 Protein of unknown function (DUF3140) 4 95 7.3E-40 T 14-10-2018 IPR021487 Protein of unknown function DUF3140 AMIS_71350 f97386ed1bd43c86e79518e00e9b4248 493 Pfam PF02934 GatB/GatE catalytic domain 13 304 1.1E-103 T 14-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 AMIS_71350 f97386ed1bd43c86e79518e00e9b4248 493 Gene3D G3DSA:1.10.10.410 430 492 5.4E-18 T 14-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal AMIS_71350 f97386ed1bd43c86e79518e00e9b4248 493 SMART SM00845 343 490 1.9E-59 T 14-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 AMIS_71350 f97386ed1bd43c86e79518e00e9b4248 493 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 9 490 1.8E-142 T 14-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 AMIS_71350 f97386ed1bd43c86e79518e00e9b4248 493 Gene3D G3DSA:1.10.150.380 317 427 3.6E-16 T 14-10-2018 AMIS_71350 f97386ed1bd43c86e79518e00e9b4248 493 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 157 171 - T 14-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 AMIS_71350 f97386ed1bd43c86e79518e00e9b4248 493 Pfam PF02637 GatB domain 344 490 5.8E-41 T 14-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 AMIS_71350 f97386ed1bd43c86e79518e00e9b4248 493 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 9 491 34.82 T 14-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 AMIS_71350 f97386ed1bd43c86e79518e00e9b4248 493 SUPERFAMILY SSF89095 343 490 3.01E-24 T 14-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 AMIS_71350 f97386ed1bd43c86e79518e00e9b4248 493 SUPERFAMILY SSF55931 11 312 3.79E-109 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AMIS_16800 f3388e91f00cb833321d7780fa9da9a8 368 ProSitePatterns PS01270 Band 7 protein family signature. 136 164 - T 14-10-2018 IPR018080 Band 7/stomatin-like, conserved site AMIS_16800 f3388e91f00cb833321d7780fa9da9a8 368 Gene3D G3DSA:3.30.479.30 50 182 4.0E-45 T 14-10-2018 AMIS_16800 f3388e91f00cb833321d7780fa9da9a8 368 PRINTS PR00721 Stomatin signature 77 98 1.0E-32 T 14-10-2018 IPR001972 Stomatin family GO:0016020 AMIS_16800 f3388e91f00cb833321d7780fa9da9a8 368 PRINTS PR00721 Stomatin signature 112 129 1.0E-32 T 14-10-2018 IPR001972 Stomatin family GO:0016020 AMIS_16800 f3388e91f00cb833321d7780fa9da9a8 368 PRINTS PR00721 Stomatin signature 29 51 1.0E-32 T 14-10-2018 IPR001972 Stomatin family GO:0016020 AMIS_16800 f3388e91f00cb833321d7780fa9da9a8 368 PRINTS PR00721 Stomatin signature 175 196 1.0E-32 T 14-10-2018 IPR001972 Stomatin family GO:0016020 AMIS_16800 f3388e91f00cb833321d7780fa9da9a8 368 PRINTS PR00721 Stomatin signature 156 174 1.0E-32 T 14-10-2018 IPR001972 Stomatin family GO:0016020 AMIS_16800 f3388e91f00cb833321d7780fa9da9a8 368 PRINTS PR00721 Stomatin signature 132 155 1.0E-32 T 14-10-2018 IPR001972 Stomatin family GO:0016020 AMIS_16800 f3388e91f00cb833321d7780fa9da9a8 368 Pfam PF01145 SPFH domain / Band 7 family 26 196 1.3E-34 T 14-10-2018 IPR001107 Band 7 domain AMIS_16800 f3388e91f00cb833321d7780fa9da9a8 368 SMART SM00244 22 180 5.0E-56 T 14-10-2018 IPR001107 Band 7 domain AMIS_16800 f3388e91f00cb833321d7780fa9da9a8 368 SUPERFAMILY SSF117892 53 187 7.72E-41 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily AMIS_36910 436eb14388ce23037feb489d9633a31d 279 Pfam PF04672 S-adenosyl methyltransferase 19 277 5.5E-93 T 14-10-2018 IPR006764 S-adenosyl-L-methionine dependent methyltransferase, SAV2177 type AMIS_36910 436eb14388ce23037feb489d9633a31d 279 PIRSF PIRSF017393 7 278 1.9E-93 T 14-10-2018 IPR006764 S-adenosyl-L-methionine dependent methyltransferase, SAV2177 type AMIS_36910 436eb14388ce23037feb489d9633a31d 279 SUPERFAMILY SSF53335 29 258 1.79E-39 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_36910 436eb14388ce23037feb489d9633a31d 279 Gene3D G3DSA:3.40.50.150 8 278 8.0E-103 T 14-10-2018 AMIS_44990 9c9cdc9615a53efe563e8253ef1bb1f1 185 SUPERFAMILY SSF51905 56 144 1.17E-14 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_44990 9c9cdc9615a53efe563e8253ef1bb1f1 185 Gene3D G3DSA:3.30.9.50 7 58 6.6E-24 T 14-10-2018 AMIS_44990 9c9cdc9615a53efe563e8253ef1bb1f1 185 Gene3D G3DSA:3.50.50.60 59 129 6.6E-24 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_44990 9c9cdc9615a53efe563e8253ef1bb1f1 185 Pfam PF01494 FAD binding domain 57 127 2.5E-5 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 AMIS_50210 63469ec552412fe9e67b68f7617e3ad3 456 SMART SM00507 359 411 2.5E-6 T 14-10-2018 IPR003615 HNH nuclease AMIS_50210 63469ec552412fe9e67b68f7617e3ad3 456 Pfam PF02720 Domain of unknown function (DUF222) 38 368 1.0E-54 T 14-10-2018 IPR003870 Domain of unknown function DUF222 AMIS_35810 d7d6355981815a51a3af58d0eb4bc562 166 Pfam PF12840 Helix-turn-helix domain 4 62 3.4E-12 T 14-10-2018 AMIS_35810 d7d6355981815a51a3af58d0eb4bc562 166 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 3.4E-10 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_35810 d7d6355981815a51a3af58d0eb4bc562 166 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 4 19 3.4E-10 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_35810 d7d6355981815a51a3af58d0eb4bc562 166 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 3.4E-10 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_35810 d7d6355981815a51a3af58d0eb4bc562 166 Gene3D G3DSA:1.10.10.10 1 109 7.5E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_35810 d7d6355981815a51a3af58d0eb4bc562 166 SUPERFAMILY SSF46785 3 100 3.87E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_35810 d7d6355981815a51a3af58d0eb4bc562 166 SMART SM00418 2 84 5.2E-19 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_4060 73ac183b4d2faa3fd002a0f83050750a 200 SUPERFAMILY SSF46689 20 75 1.25E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_4060 73ac183b4d2faa3fd002a0f83050750a 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 67 3.8E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_4060 73ac183b4d2faa3fd002a0f83050750a 200 Pfam PF16859 Bacterial transcriptional repressor C-terminal 79 188 4.9E-28 T 14-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AMIS_4060 73ac183b4d2faa3fd002a0f83050750a 200 SUPERFAMILY SSF48498 80 196 2.13E-23 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_4060 73ac183b4d2faa3fd002a0f83050750a 200 ProSitePatterns PS01081 TetR-type HTH domain signature. 34 65 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMIS_4060 73ac183b4d2faa3fd002a0f83050750a 200 Gene3D G3DSA:1.10.10.60 15 59 3.0E-15 T 14-10-2018 AMIS_4060 73ac183b4d2faa3fd002a0f83050750a 200 Gene3D G3DSA:1.10.357.10 62 199 2.2E-31 T 14-10-2018 AMIS_39410 43dd61ecb5fd4b32e8989fea6d4a8d92 226 SUPERFAMILY SSF56784 5 215 7.86E-30 T 14-10-2018 IPR036412 HAD-like superfamily AMIS_39410 43dd61ecb5fd4b32e8989fea6d4a8d92 226 Gene3D G3DSA:3.40.50.1000 9 191 2.2E-26 T 14-10-2018 IPR023214 HAD superfamily AMIS_39410 43dd61ecb5fd4b32e8989fea6d4a8d92 226 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 98 182 2.9E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMIS_39410 43dd61ecb5fd4b32e8989fea6d4a8d92 226 Gene3D G3DSA:1.10.150.240 21 86 2.2E-26 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AMIS_39410 43dd61ecb5fd4b32e8989fea6d4a8d92 226 Pfam PF13419 Haloacid dehalogenase-like hydrolase 12 187 3.9E-16 T 14-10-2018 AMIS_23840 468cf306d2f77dc40467f74eb3d4de1c 717 SUPERFAMILY SSF82866 451 676 7.98E-29 T 14-10-2018 AMIS_23840 468cf306d2f77dc40467f74eb3d4de1c 717 Gene3D G3DSA:1.20.1640.10 133 326 3.2E-7 T 14-10-2018 AMIS_23840 468cf306d2f77dc40467f74eb3d4de1c 717 Gene3D G3DSA:1.20.1640.10 469 674 4.2E-7 T 14-10-2018 AMIS_23840 468cf306d2f77dc40467f74eb3d4de1c 717 Pfam PF03176 MMPL family 425 678 1.2E-32 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 AMIS_23840 468cf306d2f77dc40467f74eb3d4de1c 717 Pfam PF03176 MMPL family 45 346 3.6E-55 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 AMIS_23840 468cf306d2f77dc40467f74eb3d4de1c 717 SUPERFAMILY SSF82866 104 319 3.01E-29 T 14-10-2018 AMIS_1860 11c1f974bf0ad2201c25076257306139 445 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 252 288 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMIS_1860 11c1f974bf0ad2201c25076257306139 445 Gene3D G3DSA:3.40.640.10 88 334 3.8E-157 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_1860 11c1f974bf0ad2201c25076257306139 445 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 22 442 97.281 T 14-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 AMIS_1860 11c1f974bf0ad2201c25076257306139 445 Gene3D G3DSA:3.90.1150.10 26 435 3.8E-157 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMIS_1860 11c1f974bf0ad2201c25076257306139 445 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 23 436 3.5E-178 T 14-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 AMIS_1860 11c1f974bf0ad2201c25076257306139 445 SUPERFAMILY SSF53383 20 437 1.63E-116 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_1860 11c1f974bf0ad2201c25076257306139 445 Pfam PF00202 Aminotransferase class-III 52 432 1.9E-81 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMIS_26070 77457c6aae7be7868292687ba91cfd11 406 Pfam PF01757 Acyltransferase family 10 331 1.0E-26 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 AMIS_17520 9039519656e0fd48f63bdecd8b5a5253 371 SUPERFAMILY SSF110296 5 369 2.35E-65 T 14-10-2018 AMIS_17520 9039519656e0fd48f63bdecd8b5a5253 371 Gene3D G3DSA:2.130.10.10 1 369 6.7E-121 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_9880 2406070975323d45c9851253974eabdb 476 SUPERFAMILY SSF75011 82 442 1.06E-5 T 14-10-2018 AMIS_41800 ac5c5ee40e1aa2ac252addecd12d6580 202 SUPERFAMILY SSF160904 4 191 5.1E-36 T 14-10-2018 AMIS_41800 ac5c5ee40e1aa2ac252addecd12d6580 202 Pfam PF11706 CGNR zinc finger 152 196 7.5E-16 T 14-10-2018 IPR021005 Zinc finger, CGNR AMIS_41800 ac5c5ee40e1aa2ac252addecd12d6580 202 Gene3D G3DSA:1.10.3300.10 10 198 1.1E-19 T 14-10-2018 IPR023286 ABATE domain superfamily AMIS_41800 ac5c5ee40e1aa2ac252addecd12d6580 202 Pfam PF07336 Putative stress-induced transcription regulator 9 148 3.4E-20 T 14-10-2018 IPR010852 Putative stress-induced transcription regulator AMIS_10280 e57994caa25347fdfdd2229e011689f4 121 Pfam PF05331 Protein of unknown function (DUF742) 10 121 3.5E-28 T 14-10-2018 IPR007995 Protein of unknown function DUF742 AMIS_78920 c2339662b4dbe53c71000c24d82b66de 112 Pfam PF01638 HxlR-like helix-turn-helix 25 111 1.2E-20 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type AMIS_78920 c2339662b4dbe53c71000c24d82b66de 112 Gene3D G3DSA:1.10.10.10 1 112 5.5E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_78920 c2339662b4dbe53c71000c24d82b66de 112 SMART SM00418 20 101 0.0037 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_78920 c2339662b4dbe53c71000c24d82b66de 112 SUPERFAMILY SSF46785 15 110 2.82E-27 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_40780 e0c25df881248bfd20c7d787520a5526 140 Pfam PF00188 Cysteine-rich secretory protein family 25 138 6.2E-22 T 14-10-2018 IPR014044 CAP domain AMIS_40780 e0c25df881248bfd20c7d787520a5526 140 Gene3D G3DSA:3.40.33.10 1 139 1.3E-48 T 14-10-2018 IPR035940 CAP superfamily AMIS_40780 e0c25df881248bfd20c7d787520a5526 140 SUPERFAMILY SSF55797 17 139 1.01E-27 T 14-10-2018 IPR035940 CAP superfamily AMIS_43660 bb7e44fec358c7a535314f8477559e7b 349 SUPERFAMILY SSF55166 221 347 1.14E-16 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AMIS_43660 bb7e44fec358c7a535314f8477559e7b 349 Gene3D G3DSA:3.30.1380.10 168 349 7.4E-14 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AMIS_43660 bb7e44fec358c7a535314f8477559e7b 349 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 234 347 4.3E-11 T 14-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 AMIS_80550 a79f988e750610bfb7d1f9704025ad08 191 Pfam PF10759 Protein of unknown function (DUF2587) 35 191 1.6E-74 T 14-10-2018 IPR019695 Bacterial proteasome activator GO:0061136 AMIS_60730 ea36d400d8f7a27aaae63521df79fca3 436 Pfam PF07690 Major Facilitator Superfamily 25 201 1.1E-20 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_60730 ea36d400d8f7a27aaae63521df79fca3 436 Gene3D G3DSA:1.20.1250.20 17 402 1.6E-36 T 14-10-2018 AMIS_60730 ea36d400d8f7a27aaae63521df79fca3 436 SUPERFAMILY SSF103473 14 405 3.92E-38 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_65580 eaf2d21ba06007713b8b4979953b6b39 191 Gene3D G3DSA:3.90.550.10 2 190 4.9E-45 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_65580 eaf2d21ba06007713b8b4979953b6b39 191 Pfam PF12804 MobA-like NTP transferase domain 5 163 1.5E-35 T 14-10-2018 IPR025877 MobA-like NTP transferase AMIS_65580 eaf2d21ba06007713b8b4979953b6b39 191 SUPERFAMILY SSF53448 2 184 6.08E-28 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_53160 b994bdcdbb3ea6d7bc44ab17264389c2 279 PIRSF PIRSF006648 1 278 1.9E-71 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AMIS_53160 b994bdcdbb3ea6d7bc44ab17264389c2 279 Pfam PF01061 ABC-2 type transporter 27 235 5.6E-30 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 AMIS_690 a4941145bd5451a45820c24cf580b09a 224 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 19 221 2.9E-54 T 14-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 AMIS_690 a4941145bd5451a45820c24cf580b09a 224 Pfam PF03006 Haemolysin-III related 16 214 4.1E-38 T 14-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 AMIS_80230 5214f4746f60079c0ff000ad77094329 401 SMART SM00387 283 396 9.5E-6 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_80230 5214f4746f60079c0ff000ad77094329 401 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 292 394 4.0E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_80230 5214f4746f60079c0ff000ad77094329 401 Gene3D G3DSA:3.30.565.10 250 396 3.9E-18 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_80230 5214f4746f60079c0ff000ad77094329 401 Pfam PF06580 Histidine kinase 194 272 9.4E-24 T 14-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 AMIS_80230 5214f4746f60079c0ff000ad77094329 401 SUPERFAMILY SSF55874 249 393 6.68E-19 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_14190 9362ca44c1ac76d1aca1b2ac65f4203a 138 SUPERFAMILY SSF52172 2 126 2.8E-7 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_14190 9362ca44c1ac76d1aca1b2ac65f4203a 138 Gene3D G3DSA:3.40.50.2300 1 133 2.1E-6 T 14-10-2018 AMIS_31050 ea3b48196d43b12c1fd796feda65dc3b 446 Gene3D G3DSA:3.50.50.100 1 404 2.4E-111 T 14-10-2018 AMIS_31050 ea3b48196d43b12c1fd796feda65dc3b 446 SUPERFAMILY SSF51905 5 215 1.01E-31 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_31050 ea3b48196d43b12c1fd796feda65dc3b 446 SUPERFAMILY SSF51905 153 344 4.08E-22 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_31050 ea3b48196d43b12c1fd796feda65dc3b 446 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 330 4.0E-53 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMIS_31050 ea3b48196d43b12c1fd796feda65dc3b 446 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 6.4E-12 T 14-10-2018 AMIS_31050 ea3b48196d43b12c1fd796feda65dc3b 446 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 292 314 6.4E-12 T 14-10-2018 AMIS_31050 ea3b48196d43b12c1fd796feda65dc3b 446 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 163 181 6.4E-12 T 14-10-2018 AMIS_31050 ea3b48196d43b12c1fd796feda65dc3b 446 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 103 121 6.4E-12 T 14-10-2018 AMIS_31050 ea3b48196d43b12c1fd796feda65dc3b 446 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 163 188 1.3E-8 T 14-10-2018 AMIS_31050 ea3b48196d43b12c1fd796feda65dc3b 446 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.3E-8 T 14-10-2018 AMIS_31050 ea3b48196d43b12c1fd796feda65dc3b 446 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 307 314 1.3E-8 T 14-10-2018 AMIS_37640 48e43f7380f629e04b57253e10d240ad 283 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 268 9.9E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_37640 48e43f7380f629e04b57253e10d240ad 283 Gene3D G3DSA:1.10.3720.10 22 281 2.1E-44 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_37640 48e43f7380f629e04b57253e10d240ad 283 SUPERFAMILY SSF161098 27 274 1.31E-48 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_63340 49d034fdc61903301adf94da27df8cca 346 Gene3D G3DSA:1.10.10.10 14 90 5.8E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_63340 49d034fdc61903301adf94da27df8cca 346 SUPERFAMILY SSF46785 28 95 6.39E-9 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_63340 49d034fdc61903301adf94da27df8cca 346 Gene3D G3DSA:3.40.50.150 161 344 4.6E-24 T 14-10-2018 AMIS_63340 49d034fdc61903301adf94da27df8cca 346 SUPERFAMILY SSF53335 126 345 6.21E-28 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_63340 49d034fdc61903301adf94da27df8cca 346 Pfam PF13847 Methyltransferase domain 171 280 4.4E-12 T 14-10-2018 IPR025714 Methyltransferase domain AMIS_33770 c6707415759879d0e7eccaab45bfcdf4 109 Pfam PF13564 DoxX-like family 4 101 2.9E-15 T 14-10-2018 IPR032808 DoxX family AMIS_34070 1911c5a7455f1adf8c0feb621b532079 132 SUPERFAMILY SSF46785 19 129 5.46E-34 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_34070 1911c5a7455f1adf8c0feb621b532079 132 Gene3D G3DSA:1.10.10.10 3 132 3.8E-45 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_34070 1911c5a7455f1adf8c0feb621b532079 132 Pfam PF01638 HxlR-like helix-turn-helix 33 120 2.1E-27 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type AMIS_53570 8277e33524449ea8989d3b7ceb8063e4 452 Hamap MF_02111 Pup--protein ligase [pafA]. 1 452 50.624 T 14-10-2018 IPR022279 Pup--protein ligase GO:0010498|GO:0016879|GO:0019941 MetaCyc: PWY-7893 AMIS_53570 8277e33524449ea8989d3b7ceb8063e4 452 PIRSF PIRSF018077 1 452 2.1E-181 T 14-10-2018 IPR004347 Pup ligase/deamidase GO:0010498|GO:0019941 MetaCyc: PWY-7893 AMIS_53570 8277e33524449ea8989d3b7ceb8063e4 452 TIGRFAM TIGR03686 pupylate_PafA: Pup--protein ligase 3 452 2.3E-229 T 14-10-2018 IPR022279 Pup--protein ligase GO:0010498|GO:0016879|GO:0019941 MetaCyc: PWY-7893 AMIS_53570 8277e33524449ea8989d3b7ceb8063e4 452 Pfam PF03136 Pup-ligase protein 4 422 1.3E-157 T 14-10-2018 IPR004347 Pup ligase/deamidase GO:0010498|GO:0019941 MetaCyc: PWY-7893 AMIS_16380 43e0d9098ba549718a670df7bca7bb41 226 Gene3D G3DSA:1.25.10.90 5 226 3.4E-75 T 14-10-2018 AMIS_16380 43e0d9098ba549718a670df7bca7bb41 226 Pfam PF08713 DNA alkylation repair enzyme 13 226 4.1E-62 T 14-10-2018 IPR014825 DNA alkylation repair enzyme AMIS_16380 43e0d9098ba549718a670df7bca7bb41 226 SUPERFAMILY SSF48371 16 226 4.8E-54 T 14-10-2018 IPR016024 Armadillo-type fold AMIS_25330 f047dbe53493327e25ce7cda9687346b 355 Pfam PF03060 Nitronate monooxygenase 6 346 9.5E-77 T 14-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 AMIS_25330 f047dbe53493327e25ce7cda9687346b 355 SUPERFAMILY SSF51412 5 347 1.4E-52 T 14-10-2018 AMIS_25330 f047dbe53493327e25ce7cda9687346b 355 Gene3D G3DSA:3.20.20.70 3 351 3.8E-101 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_2560 86bf354e683d2bb43864d821988051e4 162 SUPERFAMILY SSF46689 6 45 7.7E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_2560 86bf354e683d2bb43864d821988051e4 162 Gene3D G3DSA:1.10.10.60 4 47 9.4E-6 T 14-10-2018 AMIS_2560 86bf354e683d2bb43864d821988051e4 162 Pfam PF13936 Helix-turn-helix domain 9 44 1.9E-7 T 14-10-2018 IPR025246 Transposase IS30-like HTH domain AMIS_56880 554fa659651b3ac4448f71cdce7fca4b 386 Gene3D G3DSA:3.40.50.2300 30 363 3.0E-74 T 14-10-2018 AMIS_56880 554fa659651b3ac4448f71cdce7fca4b 386 Gene3D G3DSA:3.40.50.2300 145 374 3.0E-74 T 14-10-2018 AMIS_56880 554fa659651b3ac4448f71cdce7fca4b 386 Pfam PF13458 Periplasmic binding protein 28 360 1.1E-62 T 14-10-2018 IPR028081 Leucine-binding protein domain AMIS_56880 554fa659651b3ac4448f71cdce7fca4b 386 SUPERFAMILY SSF53822 28 379 2.88E-73 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_36600 aacbd0fd3baa94a0923079e593c62cf4 372 Pfam PF03235 Protein of unknown function DUF262 11 229 6.4E-32 T 14-10-2018 IPR004919 Domain of unknown function DUF262 AMIS_14380 e91b58a02b739ab16f3cda4b355b070f 221 SUPERFAMILY SSF46894 143 214 9.18E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_14380 e91b58a02b739ab16f3cda4b355b070f 221 SMART SM00421 150 207 7.8E-22 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_14380 e91b58a02b739ab16f3cda4b355b070f 221 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 206 1.3E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_14380 e91b58a02b739ab16f3cda4b355b070f 221 Pfam PF00072 Response regulator receiver domain 12 123 1.0E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_14380 e91b58a02b739ab16f3cda4b355b070f 221 Gene3D G3DSA:3.40.50.12740 10 213 3.4E-62 T 14-10-2018 AMIS_14380 e91b58a02b739ab16f3cda4b355b070f 221 SUPERFAMILY SSF52172 9 131 2.99E-30 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_14380 e91b58a02b739ab16f3cda4b355b070f 221 SMART SM00448 10 123 1.0E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_14380 e91b58a02b739ab16f3cda4b355b070f 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 1.5E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_14380 e91b58a02b739ab16f3cda4b355b070f 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 1.5E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_14380 e91b58a02b739ab16f3cda4b355b070f 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 1.5E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMIS_15210 e19a26c9247a3651f63882b5da308a25 371 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 16 359 4.0E-89 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMIS_15210 e19a26c9247a3651f63882b5da308a25 371 Pfam PF00953 Glycosyl transferase family 4 91 288 3.5E-34 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 AMIS_15210 e19a26c9247a3651f63882b5da308a25 371 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 3 363 22.143 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMIS_15210 e19a26c9247a3651f63882b5da308a25 371 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 46 58 6.0E-6 T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMIS_15210 e19a26c9247a3651f63882b5da308a25 371 ProSitePatterns PS01347 MraY family signature 1. 46 58 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMIS_15210 e19a26c9247a3651f63882b5da308a25 371 ProSitePatterns PS01348 MraY family signature 2. 184 195 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMIS_21560 a279a0760cb1d9ed7509208a5d92a199 78 SUPERFAMILY SSF47413 7 66 8.16E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_21560 a279a0760cb1d9ed7509208a5d92a199 78 Gene3D G3DSA:1.10.260.40 5 77 6.4E-15 T 14-10-2018 AMIS_21560 a279a0760cb1d9ed7509208a5d92a199 78 SMART SM00530 9 64 1.2E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMIS_21560 a279a0760cb1d9ed7509208a5d92a199 78 Pfam PF01381 Helix-turn-helix 10 62 2.4E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMIS_10020 c70bc29befeee514c4e918c022eca283 300 SUPERFAMILY SSF161098 11 300 2.99E-50 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_10020 c70bc29befeee514c4e918c022eca283 300 Gene3D G3DSA:1.10.3720.10 9 291 3.7E-55 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_10020 c70bc29befeee514c4e918c022eca283 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 293 2.7E-11 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_37320 e336a78b63b311b3d60404d5c2eaad7b 223 SUPERFAMILY SSF52096 3 216 6.49E-39 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMIS_37320 e336a78b63b311b3d60404d5c2eaad7b 223 Gene3D G3DSA:3.90.226.10 1 221 3.1E-50 T 14-10-2018 AMIS_37320 e336a78b63b311b3d60404d5c2eaad7b 223 Pfam PF00378 Enoyl-CoA hydratase/isomerase 44 215 1.2E-23 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AMIS_43140 2534184657df12e9026a6f82326eb521 329 Gene3D G3DSA:3.40.710.10 38 309 6.3E-35 T 14-10-2018 AMIS_43140 2534184657df12e9026a6f82326eb521 329 Pfam PF13354 Beta-lactamase enzyme family 72 267 2.4E-31 T 14-10-2018 AMIS_43140 2534184657df12e9026a6f82326eb521 329 SUPERFAMILY SSF56601 60 280 6.48E-24 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMIS_30590 02db721c0e0368eb1d96321dc465e9ff 570 Pfam PF05598 Transposase domain (DUF772) 53 127 9.3E-18 T 14-10-2018 IPR008490 Transposase InsH, N-terminal AMIS_30590 02db721c0e0368eb1d96321dc465e9ff 570 Pfam PF13751 Transposase DDE domain 424 544 3.5E-27 T 14-10-2018 IPR025668 Transposase DDE domain AMIS_31950 13488df8cc67bbcde762bcb29a42dab1 300 PRINTS PR00111 Alpha/beta hydrolase fold signature 61 76 6.7E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_31950 13488df8cc67bbcde762bcb29a42dab1 300 PRINTS PR00111 Alpha/beta hydrolase fold signature 105 118 6.7E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_31950 13488df8cc67bbcde762bcb29a42dab1 300 PRINTS PR00111 Alpha/beta hydrolase fold signature 119 132 6.7E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_31950 13488df8cc67bbcde762bcb29a42dab1 300 PRINTS PR00412 Epoxide hydrolase signature 119 132 3.9E-12 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_31950 13488df8cc67bbcde762bcb29a42dab1 300 PRINTS PR00412 Epoxide hydrolase signature 42 60 3.9E-12 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_31950 13488df8cc67bbcde762bcb29a42dab1 300 PRINTS PR00412 Epoxide hydrolase signature 267 289 3.9E-12 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMIS_31950 13488df8cc67bbcde762bcb29a42dab1 300 Gene3D G3DSA:3.40.50.1820 13 291 3.2E-67 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_31950 13488df8cc67bbcde762bcb29a42dab1 300 SUPERFAMILY SSF53474 12 292 5.2E-59 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_31950 13488df8cc67bbcde762bcb29a42dab1 300 Pfam PF00561 alpha/beta hydrolase fold 37 133 1.0E-16 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_63910 92dd3deed290b91521726d8b7c0bb72e 612 Gene3D G3DSA:1.50.10.10 310 605 2.4E-9 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 AMIS_63910 92dd3deed290b91521726d8b7c0bb72e 612 SUPERFAMILY SSF48208 277 607 9.52E-26 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AMIS_63910 92dd3deed290b91521726d8b7c0bb72e 612 Pfam PF12439 Glycogen debranching enzyme N terminal 34 239 6.0E-43 T 14-10-2018 IPR024742 Glycogen debranching enzyme, bacterial and archaeal type, N-terminal AMIS_63910 92dd3deed290b91521726d8b7c0bb72e 612 Pfam PF06202 Amylo-alpha-1,6-glucosidase 293 404 5.0E-7 T 14-10-2018 IPR032790 Glycogen debranching enzyme, C-terminal KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-6798695|Reactome: R-HSA-70221 AMIS_63910 92dd3deed290b91521726d8b7c0bb72e 612 Pfam PF06202 Amylo-alpha-1,6-glucosidase 406 606 1.7E-23 T 14-10-2018 IPR032790 Glycogen debranching enzyme, C-terminal KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-6798695|Reactome: R-HSA-70221 AMIS_8590 28c832ecb665622a1ead3a32bcdd30f7 120 Pfam PF12005 Protein of unknown function (DUF3499) 5 117 2.7E-47 T 14-10-2018 IPR021888 Protein of unknown function DUF3499 AMIS_63140 4d3190a02c46ea8876abaa79e74b9a41 529 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 35 326 3.9E-83 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMIS_63140 4d3190a02c46ea8876abaa79e74b9a41 529 Gene3D G3DSA:3.20.20.300 7 347 2.9E-108 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 AMIS_63140 4d3190a02c46ea8876abaa79e74b9a41 529 SUPERFAMILY SSF51445 16 330 7.69E-84 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_78650 132c3d802e3b928d769bf9abdafd4fd8 190 SUPERFAMILY SSF109854 3 163 8.09E-35 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes AMIS_78650 132c3d802e3b928d769bf9abdafd4fd8 190 Pfam PF04978 Protein of unknown function (DUF664) 15 164 4.4E-42 T 14-10-2018 IPR007061 Protein of unknown function DUF664 AMIS_78650 132c3d802e3b928d769bf9abdafd4fd8 190 Gene3D G3DSA:1.20.120.450 6 165 1.1E-34 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes AMIS_14260 066a0deb4586ae3dbbd9e9d8cdce629b 279 Pfam PF12804 MobA-like NTP transferase domain 7 115 5.2E-11 T 14-10-2018 IPR025877 MobA-like NTP transferase AMIS_14260 066a0deb4586ae3dbbd9e9d8cdce629b 279 SUPERFAMILY SSF53448 6 268 7.21E-33 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_14260 066a0deb4586ae3dbbd9e9d8cdce629b 279 Gene3D G3DSA:3.90.550.10 7 217 6.7E-25 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_32410 b014a82b3e64813f96e99d859cae98cc 226 Gene3D G3DSA:1.25.40.10 26 222 3.8E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_11590 84c203d80f75ccaa590ce4de2f153485 784 Gene3D G3DSA:3.60.15.10 530 770 5.2E-49 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMIS_11590 84c203d80f75ccaa590ce4de2f153485 784 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 252 421 1.0E-17 T 14-10-2018 IPR004477 ComEC/Rec2-related protein AMIS_11590 84c203d80f75ccaa590ce4de2f153485 784 Pfam PF00753 Metallo-beta-lactamase superfamily 539 693 9.2E-8 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMIS_11590 84c203d80f75ccaa590ce4de2f153485 784 SUPERFAMILY SSF56281 525 764 1.62E-29 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMIS_11590 84c203d80f75ccaa590ce4de2f153485 784 Pfam PF03772 Competence protein 230 492 6.4E-51 T 14-10-2018 IPR004477 ComEC/Rec2-related protein AMIS_16610 69491d5a5861354f07b0fbbf9984d3ee 130 PIRSF PIRSF014972 4 130 3.2E-30 T 14-10-2018 IPR025540 Fluoroacetyl-CoA thioesterase AMIS_16610 69491d5a5861354f07b0fbbf9984d3ee 130 SUPERFAMILY SSF54637 5 128 1.11E-36 T 14-10-2018 IPR029069 HotDog domain superfamily AMIS_16610 69491d5a5861354f07b0fbbf9984d3ee 130 Gene3D G3DSA:3.10.129.10 4 130 2.0E-37 T 14-10-2018 AMIS_16610 69491d5a5861354f07b0fbbf9984d3ee 130 Pfam PF03061 Thioesterase superfamily 38 108 3.7E-8 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AMIS_5490 8ff22b6a61ea2d16f486b16ed4dcf884 100 SUPERFAMILY SSF46767 4 80 4.19E-14 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 AMIS_5490 8ff22b6a61ea2d16f486b16ed4dcf884 100 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 6 83 1.6E-18 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AMIS_5490 8ff22b6a61ea2d16f486b16ed4dcf884 100 Gene3D G3DSA:1.10.10.10 4 100 2.8E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_28180 8e66c3e27a47aba339a33c6b4a5ea05f 281 TIGRFAM TIGR03769 P_ac_wall_RPT: actinobacterial surface-anchored protein domain 167 207 1.8E-14 T 14-10-2018 IPR022435 Surface-anchored repeat, actinobacteria AMIS_8760 ad4cb77ad87b4397ad2d7b5c86f2a26c 239 SUPERFAMILY SSF53271 66 233 1.56E-11 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like AMIS_8760 ad4cb77ad87b4397ad2d7b5c86f2a26c 239 Pfam PF00156 Phosphoribosyl transferase domain 191 229 2.6E-6 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AMIS_32570 e4e1eb233ea446a4f097b5ab7c42777c 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 2.1E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_32570 e4e1eb233ea446a4f097b5ab7c42777c 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 2.1E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_32570 e4e1eb233ea446a4f097b5ab7c42777c 204 Gene3D G3DSA:1.10.357.10 2 202 3.8E-23 T 14-10-2018 AMIS_32570 e4e1eb233ea446a4f097b5ab7c42777c 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 64 3.9E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_32570 e4e1eb233ea446a4f097b5ab7c42777c 204 SUPERFAMILY SSF46689 7 74 1.54E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_7620 4028c49b87c37ec4c2838145aab78e12 110 SUPERFAMILY SSF46785 11 105 2.03E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_7620 4028c49b87c37ec4c2838145aab78e12 110 Gene3D G3DSA:1.10.10.10 2 109 1.7E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_7620 4028c49b87c37ec4c2838145aab78e12 110 Pfam PF03551 Transcriptional regulator PadR-like family 15 86 6.8E-19 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal AMIS_42250 9b404afbe3b1499170f0ebee197ec3ee 130 Gene3D G3DSA:3.10.180.10 1 130 9.6E-47 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_42250 9b404afbe3b1499170f0ebee197ec3ee 130 SUPERFAMILY SSF54593 1 129 1.61E-26 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_42250 9b404afbe3b1499170f0ebee197ec3ee 130 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 125 2.5E-14 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMIS_5290 6ac29241225a1ae72b1a13ff336b547f 253 SUPERFAMILY SSF47413 90 134 2.19E-5 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_55390 7221dbc51ea3a8ca4b864274b9333489 149 SUPERFAMILY SSF46785 8 138 1.52E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_55390 7221dbc51ea3a8ca4b864274b9333489 149 ProSitePatterns PS01117 MarR-type HTH domain signature. 66 100 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site AMIS_55390 7221dbc51ea3a8ca4b864274b9333489 149 SMART SM00347 22 127 4.3E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_55390 7221dbc51ea3a8ca4b864274b9333489 149 Pfam PF12802 MarR family 41 90 5.7E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_55390 7221dbc51ea3a8ca4b864274b9333489 149 Gene3D G3DSA:1.10.10.10 2 141 2.9E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_1820 634a89f2691ef4c976c20ad28ce8293f 182 SMART SM00448 5 119 7.8E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_1820 634a89f2691ef4c976c20ad28ce8293f 182 SUPERFAMILY SSF52172 4 145 4.7E-34 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_1820 634a89f2691ef4c976c20ad28ce8293f 182 Pfam PF00072 Response regulator receiver domain 8 119 8.9E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_1820 634a89f2691ef4c976c20ad28ce8293f 182 Gene3D G3DSA:3.40.50.12740 4 179 1.3E-37 T 14-10-2018 AMIS_5900 5aa1984c3cf8113225eebaf522ecfe29 308 Gene3D G3DSA:3.40.50.300 1 228 5.4E-36 T 14-10-2018 AMIS_5900 5aa1984c3cf8113225eebaf522ecfe29 308 Pfam PF00005 ABC transporter 18 145 1.1E-18 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_5900 5aa1984c3cf8113225eebaf522ecfe29 308 SUPERFAMILY SSF52540 2 208 1.14E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_5900 5aa1984c3cf8113225eebaf522ecfe29 308 SMART SM00382 27 195 7.5E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_72140 fbb56e9ac7256872e0030c3f1258a592 205 Pfam PF09414 RNA ligase 31 182 1.5E-21 T 14-10-2018 IPR021122 RNA ligase domain, REL/Rln2 AMIS_72140 fbb56e9ac7256872e0030c3f1258a592 205 Gene3D G3DSA:3.30.470.30 20 170 1.2E-11 T 14-10-2018 AMIS_72140 fbb56e9ac7256872e0030c3f1258a592 205 SUPERFAMILY SSF56091 6 196 8.63E-27 T 14-10-2018 AMIS_78750 2c6ae688a2af71f8dfb5baca52529e80 416 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 53 389 2.1E-58 T 14-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AMIS_78750 2c6ae688a2af71f8dfb5baca52529e80 416 Gene3D G3DSA:3.40.50.2000 35 382 1.2E-80 T 14-10-2018 AMIS_78750 2c6ae688a2af71f8dfb5baca52529e80 416 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 32 387 1.7E-71 T 14-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 AMIS_78750 2c6ae688a2af71f8dfb5baca52529e80 416 Gene3D G3DSA:3.40.50.2000 221 377 1.2E-80 T 14-10-2018 AMIS_78750 2c6ae688a2af71f8dfb5baca52529e80 416 SUPERFAMILY SSF53756 29 390 5.42E-63 T 14-10-2018 AMIS_17710 8f07f92af00b6ab121063f648e91b067 421 SUPERFAMILY SSF53383 25 365 1.1E-54 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_17710 8f07f92af00b6ab121063f648e91b067 421 Gene3D G3DSA:3.90.1150.10 33 363 1.4E-74 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMIS_17710 8f07f92af00b6ab121063f648e91b067 421 Gene3D G3DSA:3.40.640.10 45 271 1.4E-74 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_17710 8f07f92af00b6ab121063f648e91b067 421 Pfam PF00155 Aminotransferase class I and II 47 363 3.3E-32 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMIS_59830 f950b9e13d7d0cb6f0517f82a1916f3d 509 SUPERFAMILY SSF51126 156 482 2.24E-44 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor AMIS_59830 f950b9e13d7d0cb6f0517f82a1916f3d 509 Pfam PF00295 Glycosyl hydrolases family 28 170 422 8.0E-11 T 14-10-2018 IPR000743 Glycoside hydrolase, family 28 GO:0004650|GO:0005975 AMIS_59830 f950b9e13d7d0cb6f0517f82a1916f3d 509 Gene3D G3DSA:2.160.20.10 135 508 5.8E-56 T 14-10-2018 IPR012334 Pectin lyase fold AMIS_77200 7d5de47e726a54b586328e36f3e47649 365 SUPERFAMILY SSF51338 5 363 3.81E-8 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMIS_77200 7d5de47e726a54b586328e36f3e47649 365 Gene3D G3DSA:3.20.20.140 44 329 1.7E-114 T 14-10-2018 AMIS_77200 7d5de47e726a54b586328e36f3e47649 365 SUPERFAMILY SSF51556 43 333 1.02E-85 T 14-10-2018 IPR032466 Metal-dependent hydrolase AMIS_77200 7d5de47e726a54b586328e36f3e47649 365 Gene3D G3DSA:2.30.40.10 33 360 1.7E-114 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMIS_77200 7d5de47e726a54b586328e36f3e47649 365 PIRSF PIRSF038994 19 365 7.8E-105 T 14-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 AMIS_77200 7d5de47e726a54b586328e36f3e47649 365 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 37 357 1.4E-73 T 14-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 AMIS_77200 7d5de47e726a54b586328e36f3e47649 365 Pfam PF01979 Amidohydrolase family 39 360 3.8E-25 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AMIS_1580 31ececf158e2afca8bde432e3a0b544d 211 SUPERFAMILY SSF89372 3 113 2.62E-7 T 14-10-2018 AMIS_1580 31ececf158e2afca8bde432e3a0b544d 211 SUPERFAMILY SSF89372 94 200 1.57E-6 T 14-10-2018 AMIS_5460 604fba2aa1a4cb2e1b82104d1e2020e1 267 SUPERFAMILY SSF48239 37 266 9.42E-21 T 14-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid AMIS_5460 604fba2aa1a4cb2e1b82104d1e2020e1 267 Gene3D G3DSA:1.50.10.20 21 203 7.8E-15 T 14-10-2018 AMIS_55170 54e4885f3349a3aea5662a8ab28dc57f 269 Gene3D G3DSA:1.10.3720.10 1 256 7.5E-59 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_55170 54e4885f3349a3aea5662a8ab28dc57f 269 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 261 1.5E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_55170 54e4885f3349a3aea5662a8ab28dc57f 269 SUPERFAMILY SSF161098 2 269 1.31E-66 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_59010 110c2110fd460d87e1392187fe085b19 435 Gene3D G3DSA:3.40.50.1820 37 206 5.2E-47 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_59010 110c2110fd460d87e1392187fe085b19 435 Gene3D G3DSA:2.60.40.2200 308 435 1.5E-41 T 14-10-2018 AMIS_59010 110c2110fd460d87e1392187fe085b19 435 SUPERFAMILY SSF53474 38 190 2.46E-18 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_8300 9ddf13162c573038c06301ae682b0061 221 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 25 174 7.7E-16 T 14-10-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system AMIS_61010 dde52226aca59d31c7e42d64485006cd 111 Pfam PF02036 SCP-2 sterol transfer family 20 111 1.1E-9 T 14-10-2018 IPR003033 SCP2 sterol-binding domain AMIS_61010 dde52226aca59d31c7e42d64485006cd 111 SUPERFAMILY SSF55718 10 111 1.44E-17 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily AMIS_61010 dde52226aca59d31c7e42d64485006cd 111 Gene3D G3DSA:3.30.1050.10 4 111 2.4E-13 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily AMIS_67270 274d4959163b7034ff8c4c52a7d11fe5 140 Gene3D G3DSA:3.10.129.10 1 133 2.9E-32 T 14-10-2018 AMIS_67270 274d4959163b7034ff8c4c52a7d11fe5 140 Pfam PF13279 Thioesterase-like superfamily 15 122 2.7E-15 T 14-10-2018 AMIS_67270 274d4959163b7034ff8c4c52a7d11fe5 140 SUPERFAMILY SSF54637 5 128 1.57E-31 T 14-10-2018 IPR029069 HotDog domain superfamily AMIS_55080 96f35838db27c2cd07debb9533cd84f7 464 Gene3D G3DSA:2.160.20.10 58 464 4.3E-148 T 14-10-2018 IPR012334 Pectin lyase fold AMIS_55080 96f35838db27c2cd07debb9533cd84f7 464 SMART SM00656 134 385 7.2E-40 T 14-10-2018 IPR002022 Pectate lyase AMIS_55080 96f35838db27c2cd07debb9533cd84f7 464 Pfam PF00544 Pectate lyase 168 378 2.7E-47 T 14-10-2018 IPR002022 Pectate lyase AMIS_55080 96f35838db27c2cd07debb9533cd84f7 464 SUPERFAMILY SSF51126 65 463 6.81E-73 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor AMIS_73030 3239d70657a1ce55a4b548518d8fbcfc 203 Gene3D G3DSA:3.40.50.1820 29 198 6.2E-14 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_73030 3239d70657a1ce55a4b548518d8fbcfc 203 SUPERFAMILY SSF53474 3 199 1.42E-16 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_32270 c1279ca12c35211a8e0324303764fbc2 140 Gene3D G3DSA:2.30.110.10 2 139 8.4E-45 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AMIS_32270 c1279ca12c35211a8e0324303764fbc2 140 Pfam PF04075 F420H(2)-dependent quinone reductase 10 134 7.7E-34 T 14-10-2018 IPR004378 F420H(2)-dependent quinone reductase GO:0016491|GO:0055114 AMIS_32270 c1279ca12c35211a8e0324303764fbc2 140 TIGRFAM TIGR00026 hi_GC_TIGR00026: deazaflavin-dependent oxidoreductase, nitroreductase family 30 136 3.8E-26 T 14-10-2018 IPR004378 F420H(2)-dependent quinone reductase GO:0016491|GO:0055114 AMIS_5090 def122581166ff4c5d01ca8a38f33384 92 Pfam PF11239 Protein of unknown function (DUF3040) 1 83 2.6E-18 T 14-10-2018 IPR021401 Protein of unknown function DUF3040 AMIS_66720 6da745719a67a43ca7229ae3e11ece48 617 Pfam PF04542 Sigma-70 region 2 17 78 1.1E-9 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_66720 6da745719a67a43ca7229ae3e11ece48 617 SUPERFAMILY SSF88659 94 154 1.57E-7 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_66720 6da745719a67a43ca7229ae3e11ece48 617 Gene3D G3DSA:1.10.1740.10 3 74 2.9E-7 T 14-10-2018 AMIS_66720 6da745719a67a43ca7229ae3e11ece48 617 SUPERFAMILY SSF88946 11 90 8.24E-12 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_35160 cffb347c45680ebff0999ee172e0a6d8 387 SUPERFAMILY SSF55031 185 292 7.85E-30 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AMIS_35160 cffb347c45680ebff0999ee172e0a6d8 387 Pfam PF07687 Peptidase dimerisation domain 187 278 7.3E-7 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain AMIS_35160 cffb347c45680ebff0999ee172e0a6d8 387 Gene3D G3DSA:3.30.70.360 182 296 1.6E-129 T 14-10-2018 AMIS_35160 cffb347c45680ebff0999ee172e0a6d8 387 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 17 372 3.1E-99 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 AMIS_35160 cffb347c45680ebff0999ee172e0a6d8 387 Pfam PF01546 Peptidase family M20/M25/M40 74 381 8.2E-36 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 AMIS_35160 cffb347c45680ebff0999ee172e0a6d8 387 Gene3D G3DSA:3.40.630.10 18 369 1.6E-129 T 14-10-2018 AMIS_35160 cffb347c45680ebff0999ee172e0a6d8 387 SUPERFAMILY SSF53187 12 385 1.0E-82 T 14-10-2018 AMIS_35160 cffb347c45680ebff0999ee172e0a6d8 387 PIRSF PIRSF005962 7 387 1.3E-120 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 AMIS_3580 f497d9d687a94c3cdeedcaa6c596236e 309 Gene3D G3DSA:3.90.920.30 23 308 1.1E-93 T 14-10-2018 AMIS_3580 f497d9d687a94c3cdeedcaa6c596236e 309 TIGRFAM TIGR02778 ligD_pol: DNA ligase D, polymerase domain 17 262 1.2E-77 T 14-10-2018 IPR014145 DNA ligase D, polymerase domain AMIS_77020 bee14ec4f9a4c13d8f3bb5d7f33076fb 209 Gene3D G3DSA:1.10.3210.10 14 177 1.3E-12 T 14-10-2018 AMIS_77020 bee14ec4f9a4c13d8f3bb5d7f33076fb 209 SUPERFAMILY SSF109604 23 198 6.28E-30 T 14-10-2018 AMIS_77020 bee14ec4f9a4c13d8f3bb5d7f33076fb 209 PIRSF PIRSF035170 3 209 2.6E-62 T 14-10-2018 IPR009218 Predicted HD phosphohydrolase AMIS_79720 389c41c5357ba62b72f750f1d5423f01 278 SUPERFAMILY SSF103473 13 257 2.88E-5 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_79720 389c41c5357ba62b72f750f1d5423f01 278 Pfam PF02517 CAAX protease self-immunity 107 196 2.2E-16 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 AMIS_16590 8ac8b3f80571432dbfee2e28ab0062ad 215 SUPERFAMILY SSF49329 74 199 3.4E-10 T 14-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AMIS_16590 8ac8b3f80571432dbfee2e28ab0062ad 215 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 71 199 9.7E-8 T 14-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AMIS_16590 8ac8b3f80571432dbfee2e28ab0062ad 215 Gene3D G3DSA:2.60.40.200 55 200 3.1E-12 T 14-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AMIS_67450 830c00fcaaeb4ca7132514cec5a03c3f 234 Pfam PF03083 Sugar efflux transporter for intercellular exchange 23 81 1.9E-5 T 14-10-2018 IPR004316 SWEET sugar transporter GO:0016021 Reactome: R-HSA-189200 AMIS_67450 830c00fcaaeb4ca7132514cec5a03c3f 234 Gene3D G3DSA:1.20.1280.290 2 89 3.5E-12 T 14-10-2018 AMIS_67450 830c00fcaaeb4ca7132514cec5a03c3f 234 Gene3D G3DSA:1.20.1280.290 123 217 9.0E-8 T 14-10-2018 AMIS_7760 4e407debc4f5a5a59c11478f38aba0be 262 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 64 245 1.9E-20 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain AMIS_7760 4e407debc4f5a5a59c11478f38aba0be 262 Gene3D G3DSA:3.40.50.1110 49 257 4.9E-24 T 14-10-2018 IPR036514 SGNH hydrolase superfamily AMIS_7760 4e407debc4f5a5a59c11478f38aba0be 262 SUPERFAMILY SSF52266 59 256 2.44E-27 T 14-10-2018 AMIS_58440 9e4021e30ee525e441aed3e9d6449280 74 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 11 64 4.9E-19 T 14-10-2018 IPR012933 HicA mRNA interferase family GO:0003729 AMIS_58440 9e4021e30ee525e441aed3e9d6449280 74 SUPERFAMILY SSF54786 10 70 5.89E-16 T 14-10-2018 AMIS_58440 9e4021e30ee525e441aed3e9d6449280 74 Gene3D G3DSA:3.30.920.30 8 72 1.3E-22 T 14-10-2018 IPR038570 HicA superfamily AMIS_37460 50623a18aa77c8f3fd06ea549e662cc4 147 Gene3D G3DSA:1.20.120.160 27 140 3.4E-16 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMIS_37460 50623a18aa77c8f3fd06ea549e662cc4 147 SUPERFAMILY SSF47226 42 137 1.7E-15 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMIS_37460 50623a18aa77c8f3fd06ea549e662cc4 147 Pfam PF01627 Hpt domain 50 128 1.4E-10 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AMIS_23710 d72769499379955a30063a6ee43f2bf2 415 Gene3D G3DSA:1.20.120.1630 137 304 4.9E-11 T 14-10-2018 AMIS_23710 d72769499379955a30063a6ee43f2bf2 415 Pfam PF04191 Phospholipid methyltransferase 221 288 1.4E-7 T 14-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 AMIS_15070 e7ddcb27063d151b30aa0743a75a7419 815 Pfam PF01841 Transglutaminase-like superfamily 432 544 5.4E-28 T 14-10-2018 IPR002931 Transglutaminase-like AMIS_15070 e7ddcb27063d151b30aa0743a75a7419 815 SUPERFAMILY SSF54001 411 568 2.1E-31 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily AMIS_15070 e7ddcb27063d151b30aa0743a75a7419 815 Gene3D G3DSA:3.10.620.30 396 570 2.1E-25 T 14-10-2018 AMIS_15070 e7ddcb27063d151b30aa0743a75a7419 815 SMART SM00460 476 546 8.4E-21 T 14-10-2018 IPR002931 Transglutaminase-like AMIS_39080 90c83fe5ed9bf84acf622520cbe36a08 145 Pfam PF01047 MarR family 37 89 2.5E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_39080 90c83fe5ed9bf84acf622520cbe36a08 145 SUPERFAMILY SSF46785 17 137 3.81E-26 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_39080 90c83fe5ed9bf84acf622520cbe36a08 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 5.3E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_39080 90c83fe5ed9bf84acf622520cbe36a08 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 5.3E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_39080 90c83fe5ed9bf84acf622520cbe36a08 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 5.3E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_39080 90c83fe5ed9bf84acf622520cbe36a08 145 Gene3D G3DSA:1.10.10.10 8 141 1.1E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_39080 90c83fe5ed9bf84acf622520cbe36a08 145 SMART SM00347 25 124 5.6E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_13630 239d094f006f9c05f0d085a4b6105ea0 707 SUPERFAMILY SSF63825 367 690 3.66E-7 T 14-10-2018 AMIS_13630 239d094f006f9c05f0d085a4b6105ea0 707 Gene3D G3DSA:2.130.10.10 95 336 7.5E-13 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_13630 239d094f006f9c05f0d085a4b6105ea0 707 Pfam PF13449 Esterase-like activity of phytase 439 689 3.6E-45 T 14-10-2018 IPR027372 Phytase-like domain AMIS_13630 239d094f006f9c05f0d085a4b6105ea0 707 SUPERFAMILY SSF50969 118 441 1.31E-21 T 14-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like AMIS_19330 42d535602f1704c298fbe18b6d2a2551 407 PRINTS PR00359 B-class P450 signature 162 177 1.1E-46 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_19330 42d535602f1704c298fbe18b6d2a2551 407 PRINTS PR00359 B-class P450 signature 203 225 1.1E-46 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_19330 42d535602f1704c298fbe18b6d2a2551 407 PRINTS PR00359 B-class P450 signature 358 369 1.1E-46 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_19330 42d535602f1704c298fbe18b6d2a2551 407 PRINTS PR00359 B-class P450 signature 327 342 1.1E-46 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_19330 42d535602f1704c298fbe18b6d2a2551 407 PRINTS PR00359 B-class P450 signature 299 326 1.1E-46 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_19330 42d535602f1704c298fbe18b6d2a2551 407 PRINTS PR00359 B-class P450 signature 145 161 1.1E-46 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_19330 42d535602f1704c298fbe18b6d2a2551 407 PRINTS PR00359 B-class P450 signature 101 112 1.1E-46 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_19330 42d535602f1704c298fbe18b6d2a2551 407 PRINTS PR00359 B-class P450 signature 282 293 1.1E-46 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_19330 42d535602f1704c298fbe18b6d2a2551 407 PRINTS PR00359 B-class P450 signature 349 358 1.1E-46 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMIS_19330 42d535602f1704c298fbe18b6d2a2551 407 SUPERFAMILY SSF48264 20 406 1.13E-77 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_19330 42d535602f1704c298fbe18b6d2a2551 407 Gene3D G3DSA:1.10.630.10 1 407 1.2E-128 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_19330 42d535602f1704c298fbe18b6d2a2551 407 Pfam PF00067 Cytochrome P450 283 374 7.4E-15 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_35180 f1c5d4d02992bf8d1d0d0846e79be4bb 201 Gene3D G3DSA:3.30.428.10 56 193 2.3E-9 T 14-10-2018 IPR036265 HIT-like superfamily AMIS_35180 f1c5d4d02992bf8d1d0d0846e79be4bb 201 SUPERFAMILY SSF54197 63 169 8.08E-11 T 14-10-2018 IPR036265 HIT-like superfamily AMIS_27310 d88a73d725de97b0eba9b3244b57b280 169 Pfam PF01613 Flavin reductase like domain 22 166 3.8E-31 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 AMIS_27310 d88a73d725de97b0eba9b3244b57b280 169 SUPERFAMILY SSF50475 14 166 7.36E-42 T 14-10-2018 AMIS_27310 d88a73d725de97b0eba9b3244b57b280 169 SMART SM00903 21 165 5.9E-46 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 AMIS_27310 d88a73d725de97b0eba9b3244b57b280 169 Gene3D G3DSA:2.30.110.10 11 169 6.3E-45 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AMIS_33350 e32458e7b2beec158d9a79b177ee3921 245 Pfam PF09844 Uncharacterized conserved protein (COG2071) 21 233 1.2E-69 T 14-10-2018 IPR018644 Protein of unknown function DUF2071 AMIS_33350 e32458e7b2beec158d9a79b177ee3921 245 SUPERFAMILY SSF160104 21 173 6.54E-12 T 14-10-2018 IPR023375 Acetoacetate decarboxylase domain superfamily KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 AMIS_43480 290f07bb41898c9629b182cb65d79edc 304 SUPERFAMILY SSF47240 47 298 8.11E-63 T 14-10-2018 IPR009078 Ferritin-like superfamily AMIS_43480 290f07bb41898c9629b182cb65d79edc 304 Gene3D G3DSA:1.20.1260.10 40 304 2.4E-91 T 14-10-2018 IPR012347 Ferritin-like AMIS_43480 290f07bb41898c9629b182cb65d79edc 304 Pfam PF05138 Phenylacetic acid catabolic protein 45 304 1.8E-79 T 14-10-2018 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 AMIS_43480 290f07bb41898c9629b182cb65d79edc 304 TIGRFAM TIGR02158 PA_CoA_Oxy3: phenylacetate-CoA oxygenase, PaaI subunit 55 304 7.0E-67 T 14-10-2018 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C GO:0010124 AMIS_57720 9338e6bac4899638f2dbd74618fb6023 348 Pfam PF12224 Putative amidoligase enzyme 6 316 6.4E-22 T 14-10-2018 IPR022025 Putative amidoligase enzyme AMIS_34400 814aea57754e2e2daaadb6f4325a5264 129 SUPERFAMILY SSF55298 4 128 2.98E-22 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AMIS_34400 814aea57754e2e2daaadb6f4325a5264 129 Gene3D G3DSA:3.30.1330.40 11 129 7.1E-22 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AMIS_34400 814aea57754e2e2daaadb6f4325a5264 129 Pfam PF01042 Endoribonuclease L-PSP 17 127 2.1E-16 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 AMIS_2180 e271f4ee4c27611afb99cf559e08600e 317 Gene3D G3DSA:3.20.20.100 3 317 8.2E-111 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMIS_2180 e271f4ee4c27611afb99cf559e08600e 317 Pfam PF00248 Aldo/keto reductase family 19 316 3.1E-67 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain AMIS_2180 e271f4ee4c27611afb99cf559e08600e 317 SUPERFAMILY SSF51430 4 315 1.31E-96 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMIS_2180 e271f4ee4c27611afb99cf559e08600e 317 PRINTS PR00069 Aldo-keto reductase signature 42 66 2.9E-5 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMIS_2180 e271f4ee4c27611afb99cf559e08600e 317 PRINTS PR00069 Aldo-keto reductase signature 142 159 2.9E-5 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMIS_3800 62cad58d55aaef4f9f8f7a8b9a81d2d1 273 Pfam PF11228 Protein of unknown function (DUF3027) 36 228 2.4E-84 T 14-10-2018 IPR021391 Protein of unknown function DUF3027 AMIS_3000 4461a3026e85f6c8436ef696a765980a 237 Pfam PF13490 Putative zinc-finger 11 35 9.5E-6 T 14-10-2018 IPR027383 Putative zinc-finger AMIS_3000 4461a3026e85f6c8436ef696a765980a 237 Gene3D G3DSA:1.10.10.1320 4 64 1.3E-22 T 14-10-2018 AMIS_57520 2f491caa567020092817e01549412f33 335 SUPERFAMILY SSF53474 46 214 8.19E-12 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_81170 b156ee8224a379cce3bdc45c007556cb 273 Gene3D G3DSA:3.30.428.10 38 166 1.1E-10 T 14-10-2018 IPR036265 HIT-like superfamily AMIS_81170 b156ee8224a379cce3bdc45c007556cb 273 SUPERFAMILY SSF54197 44 178 3.19E-14 T 14-10-2018 IPR036265 HIT-like superfamily AMIS_39360 24b64d0ae0f8e048e698a9c765bab1f0 177 Gene3D G3DSA:3.90.280.10 1 177 2.0E-49 T 14-10-2018 IPR036610 PEBP-like superfamily AMIS_39360 24b64d0ae0f8e048e698a9c765bab1f0 177 Pfam PF01161 Phosphatidylethanolamine-binding protein 39 175 1.8E-32 T 14-10-2018 IPR008914 Phosphatidylethanolamine-binding protein AMIS_39360 24b64d0ae0f8e048e698a9c765bab1f0 177 SUPERFAMILY SSF49777 14 176 1.14E-45 T 14-10-2018 IPR036610 PEBP-like superfamily AMIS_39360 24b64d0ae0f8e048e698a9c765bab1f0 177 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 38 173 5.8E-34 T 14-10-2018 IPR005247 YbhB/YbcL AMIS_46430 298050f47927358abf196d714cebd49e 234 Gene3D G3DSA:3.40.50.300 144 212 6.9E-6 T 14-10-2018 AMIS_46430 298050f47927358abf196d714cebd49e 234 SUPERFAMILY SSF52540 7 187 7.59E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_44730 8fbc8a73a6a1661abb980180e18f676b 59 Gene3D G3DSA:2.30.29.50 7 59 8.4E-8 T 14-10-2018 IPR037063 Bacterial Pleckstrin homology domain superfamily AMIS_44730 8fbc8a73a6a1661abb980180e18f676b 59 SUPERFAMILY SSF50729 18 59 6.76E-8 T 14-10-2018 AMIS_44730 8fbc8a73a6a1661abb980180e18f676b 59 Pfam PF08000 Bacterial PH domain 17 58 4.9E-8 T 14-10-2018 IPR012544 Bacterial Pleckstrin homology domain AMIS_58100 96892f79796bc343596708c183c3913e 468 Pfam PF13579 Glycosyl transferase 4-like domain 18 190 3.2E-21 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AMIS_58100 96892f79796bc343596708c183c3913e 468 Gene3D G3DSA:3.40.50.2000 1 206 2.3E-23 T 14-10-2018 AMIS_58100 96892f79796bc343596708c183c3913e 468 SUPERFAMILY SSF53756 4 398 5.02E-49 T 14-10-2018 AMIS_58100 96892f79796bc343596708c183c3913e 468 Pfam PF00534 Glycosyl transferases group 1 208 371 3.1E-12 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 AMIS_58100 96892f79796bc343596708c183c3913e 468 Gene3D G3DSA:3.40.50.2000 207 381 3.0E-20 T 14-10-2018 AMIS_7200 6611037008ad8f2316bfff252a556b85 205 Gene3D G3DSA:3.40.50.170 1 205 3.0E-69 T 14-10-2018 AMIS_7200 6611037008ad8f2316bfff252a556b85 205 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 139 162 - T 14-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMIS_7200 6611037008ad8f2316bfff252a556b85 205 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 7 195 3.7E-63 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 AMIS_7200 6611037008ad8f2316bfff252a556b85 205 SUPERFAMILY SSF53328 8 201 1.11E-54 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMIS_7200 6611037008ad8f2316bfff252a556b85 205 Pfam PF00551 Formyl transferase 8 186 1.1E-47 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMIS_7200 6611037008ad8f2316bfff252a556b85 205 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 8 193 26.901 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 AMIS_38350 c1a91ce2b39d98a727afec96b141668b 209 Gene3D G3DSA:3.40.109.10 1 207 2.1E-37 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AMIS_38350 c1a91ce2b39d98a727afec96b141668b 209 SUPERFAMILY SSF55469 9 207 4.58E-35 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AMIS_38350 c1a91ce2b39d98a727afec96b141668b 209 Pfam PF00881 Nitroreductase family 19 183 2.3E-21 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AMIS_1000 cbde546aca2b9fd8100fd4864d53570a 492 Gene3D G3DSA:3.30.1610.20 1 235 1.3E-86 T 14-10-2018 IPR038546 Hen1, N-terminal domain superfamily AMIS_1000 cbde546aca2b9fd8100fd4864d53570a 492 Pfam PF12623 RNA repair, ligase-Pnkp-associating, region of Hen1 1 246 1.6E-96 T 14-10-2018 IPR024740 Hen1, N-terminal AMIS_1000 cbde546aca2b9fd8100fd4864d53570a 492 Gene3D G3DSA:3.40.50.150 254 488 2.9E-67 T 14-10-2018 AMIS_1000 cbde546aca2b9fd8100fd4864d53570a 492 TIGRFAM TIGR04074 bacter_Hen1: 3' terminal RNA ribose 2'-O-methyltransferase Hen1 2 462 2.1E-186 T 14-10-2018 IPR024026 3'-RNA ribose 2'-O-methyltransferase, Hen1, bacterial AMIS_1000 cbde546aca2b9fd8100fd4864d53570a 492 SUPERFAMILY SSF53335 270 431 1.31E-19 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_1000 cbde546aca2b9fd8100fd4864d53570a 492 Pfam PF13489 Methyltransferase domain 276 440 3.3E-11 T 14-10-2018 AMIS_18410 bd615e4d6e3bb1348dc71c09de4d2feb 233 Pfam PF09323 Domain of unknown function (DUF1980) 6 109 1.8E-6 T 14-10-2018 IPR015402 Protein of unknown function DUF1980 AMIS_18410 bd615e4d6e3bb1348dc71c09de4d2feb 233 TIGRFAM TIGR03943 TIGR03943: TIGR03943 family protein 23 232 1.7E-47 T 14-10-2018 IPR015402 Protein of unknown function DUF1980 AMIS_4920 e6a48f84816835860aa6c9373d26ea07 364 Pfam PF06224 Winged helix DNA-binding domain 57 352 1.0E-26 T 14-10-2018 IPR009351 Protein of unknown function DUF1006 AMIS_56740 23a3077a7120a34d4aab6218500b32e4 331 SUPERFAMILY SSF53448 1 225 6.09E-51 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_56740 23a3077a7120a34d4aab6218500b32e4 331 Pfam PF00535 Glycosyl transferase family 2 7 136 9.5E-27 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AMIS_56740 23a3077a7120a34d4aab6218500b32e4 331 Gene3D G3DSA:3.90.550.10 1 222 9.3E-42 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_50250 99ec339524d84e39e0564abaa7d39725 138 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 19 134 1.4E-36 T 14-10-2018 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III AMIS_50250 99ec339524d84e39e0564abaa7d39725 138 SUPERFAMILY SSF103473 50 126 4.32E-5 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_49130 43720230d17870ed2126a8caec4ba3dc 365 Pfam PF06224 Winged helix DNA-binding domain 38 339 1.2E-50 T 14-10-2018 IPR009351 Protein of unknown function DUF1006 AMIS_31930 751dd255cf1cc9fd1c41c49a430b93b5 167 PIRSF PIRSF032285 3 163 2.5E-48 T 14-10-2018 IPR011235 MepB-like AMIS_31930 751dd255cf1cc9fd1c41c49a430b93b5 167 Pfam PF08877 MepB protein 26 146 4.8E-46 T 14-10-2018 IPR011235 MepB-like AMIS_31930 751dd255cf1cc9fd1c41c49a430b93b5 167 Gene3D G3DSA:3.40.1350.140 7 160 5.3E-47 T 14-10-2018 IPR038231 MepB-like superfamily AMIS_43560 442b75d245036c8dee9eb611d1e5f246 231 SMART SM00731 2 139 0.0036 T 14-10-2018 IPR006640 SprT-like AMIS_43560 442b75d245036c8dee9eb611d1e5f246 231 Pfam PF10263 SprT-like family 16 92 5.9E-10 T 14-10-2018 IPR006640 SprT-like AMIS_56570 6e4da96ae8e2f741d58567dc6c7f0453 150 Hamap MF_00775 UPF0311 protein . 7 150 22.081 T 14-10-2018 IPR020915 Uncharacterised protein family UPF0311 AMIS_56570 6e4da96ae8e2f741d58567dc6c7f0453 150 Pfam PF11578 Protein of unknown function (DUF3237) 7 149 2.1E-36 T 14-10-2018 IPR020915 Uncharacterised protein family UPF0311 AMIS_56570 6e4da96ae8e2f741d58567dc6c7f0453 150 Gene3D G3DSA:2.40.160.20 3 149 2.0E-45 T 14-10-2018 AMIS_30580 394c1821a4ddc97ec6282e54c414286b 40 Pfam PF00444 Ribosomal protein L36 1 40 3.0E-12 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_30580 394c1821a4ddc97ec6282e54c414286b 40 SUPERFAMILY SSF57840 1 40 1.83E-8 T 14-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_16680 8f80a14ec470e2de48f11e02e6ee4d87 391 Gene3D G3DSA:3.30.565.10 267 386 3.2E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_16680 8f80a14ec470e2de48f11e02e6ee4d87 391 SUPERFAMILY SSF55874 272 385 5.85E-13 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_16680 8f80a14ec470e2de48f11e02e6ee4d87 391 Pfam PF07730 Histidine kinase 191 256 3.6E-21 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMIS_69010 6c3ea93e7c65df540c2a9ea38f882861 358 SUPERFAMILY SSF53686 14 321 3.14E-73 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMIS_69010 6c3ea93e7c65df540c2a9ea38f882861 358 Gene3D G3DSA:3.40.50.1100 26 317 1.5E-87 T 14-10-2018 AMIS_69010 6c3ea93e7c65df540c2a9ea38f882861 358 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 27 313 7.9E-63 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AMIS_69010 6c3ea93e7c65df540c2a9ea38f882861 358 Gene3D G3DSA:3.40.50.1100 61 157 1.5E-87 T 14-10-2018 AMIS_24070 5329eafb34c21d8a39a134380a686315 118 Gene3D G3DSA:3.10.180.10 2 117 7.4E-21 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_24070 5329eafb34c21d8a39a134380a686315 118 SUPERFAMILY SSF54593 8 115 5.5E-13 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_65850 82aa007cf96c8f575a895ce7610974e3 283 SUPERFAMILY SSF140959 20 279 1.29E-95 T 14-10-2018 IPR037217 Tryptophan/Indoleamine 2,3-dioxygenase-like GO:0019441|GO:0020037|GO:0046872 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 AMIS_65850 82aa007cf96c8f575a895ce7610974e3 283 Gene3D G3DSA:1.20.58.480 18 283 1.1E-95 T 14-10-2018 AMIS_65850 82aa007cf96c8f575a895ce7610974e3 283 Pfam PF03301 Tryptophan 2,3-dioxygenase 205 277 1.3E-19 T 14-10-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 AMIS_65850 82aa007cf96c8f575a895ce7610974e3 283 Pfam PF03301 Tryptophan 2,3-dioxygenase 13 144 1.6E-40 T 14-10-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 AMIS_65850 82aa007cf96c8f575a895ce7610974e3 283 Hamap MF_01972 Tryptophan 2,3-dioxygenase [kynA]. 14 279 38.475 T 14-10-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 AMIS_54610 7a9a3230114e1b26c9d4c8f1d57af07b 239 SMART SM00332 2 234 3.8E-25 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_54610 7a9a3230114e1b26c9d4c8f1d57af07b 239 SMART SM00331 11 236 5.2E-31 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_54610 7a9a3230114e1b26c9d4c8f1d57af07b 239 Pfam PF13672 Protein phosphatase 2C 18 209 2.9E-15 T 14-10-2018 AMIS_54610 7a9a3230114e1b26c9d4c8f1d57af07b 239 Gene3D G3DSA:3.60.40.10 2 237 1.7E-64 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_54610 7a9a3230114e1b26c9d4c8f1d57af07b 239 SUPERFAMILY SSF81606 5 235 1.7E-64 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_29840 2eee32d10a589b2b98ace064fd3525d8 516 SUPERFAMILY SSF50494 29 246 1.98E-32 T 14-10-2018 IPR009003 Peptidase S1, PA clan AMIS_29840 2eee32d10a589b2b98ace064fd3525d8 516 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 114 128 2.4E-8 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AMIS_29840 2eee32d10a589b2b98ace064fd3525d8 516 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 58 73 2.4E-8 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AMIS_29840 2eee32d10a589b2b98ace064fd3525d8 516 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 187 199 2.4E-8 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AMIS_29840 2eee32d10a589b2b98ace064fd3525d8 516 SMART SM00020 29 242 1.3E-7 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 AMIS_29840 2eee32d10a589b2b98ace064fd3525d8 516 Gene3D G3DSA:2.40.10.10 57 252 4.9E-24 T 14-10-2018 AMIS_29840 2eee32d10a589b2b98ace064fd3525d8 516 Pfam PF00089 Trypsin 33 242 4.9E-22 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 AMIS_78840 2baad3b10fc47ab162d5a86f1bec7591 540 Gene3D G3DSA:1.25.40.10 226 366 2.4E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_78840 2baad3b10fc47ab162d5a86f1bec7591 540 Pfam PF00990 Diguanylate cyclase, GGDEF domain 369 526 3.9E-33 T 14-10-2018 IPR000160 GGDEF domain AMIS_78840 2baad3b10fc47ab162d5a86f1bec7591 540 Gene3D G3DSA:1.25.40.10 39 225 2.2E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_78840 2baad3b10fc47ab162d5a86f1bec7591 540 SUPERFAMILY SSF48452 63 252 1.9E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_78840 2baad3b10fc47ab162d5a86f1bec7591 540 SUPERFAMILY SSF55073 374 529 6.43E-38 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_78840 2baad3b10fc47ab162d5a86f1bec7591 540 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 367 528 9.1E-37 T 14-10-2018 IPR000160 GGDEF domain AMIS_78840 2baad3b10fc47ab162d5a86f1bec7591 540 SMART SM00267 358 530 1.9E-48 T 14-10-2018 IPR000160 GGDEF domain AMIS_78840 2baad3b10fc47ab162d5a86f1bec7591 540 SUPERFAMILY SSF48452 227 329 2.97E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_78840 2baad3b10fc47ab162d5a86f1bec7591 540 Gene3D G3DSA:3.30.70.270 367 537 7.8E-47 T 14-10-2018 AMIS_160 6c21d215a3539fc61c90a1f836f93b81 213 Gene3D G3DSA:3.40.30.10 1 204 6.2E-71 T 14-10-2018 AMIS_160 6c21d215a3539fc61c90a1f836f93b81 213 Pfam PF01323 DSBA-like thioredoxin domain 3 199 1.1E-38 T 14-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 AMIS_160 6c21d215a3539fc61c90a1f836f93b81 213 SUPERFAMILY SSF52833 3 207 1.34E-46 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMIS_18390 1e29297ecce1791c0d5b4a48dd232c40 363 Pfam PF01699 Sodium/calcium exchanger protein 219 360 1.5E-11 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 AMIS_18390 1e29297ecce1791c0d5b4a48dd232c40 363 Pfam PF01699 Sodium/calcium exchanger protein 34 185 3.1E-14 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 AMIS_44330 cee1b1a8e6b25319f5987b4b05b3c53b 112 Gene3D G3DSA:1.10.10.10 10 104 2.6E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_44330 cee1b1a8e6b25319f5987b4b05b3c53b 112 Pfam PF03551 Transcriptional regulator PadR-like family 28 85 1.7E-10 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal AMIS_44330 cee1b1a8e6b25319f5987b4b05b3c53b 112 SUPERFAMILY SSF46785 6 101 9.93E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_80890 cf04d37041dbd6b3a9bd4c6e462d3680 79 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 4 77 20.482 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_80890 cf04d37041dbd6b3a9bd4c6e462d3680 79 TIGRFAM TIGR00165 S18: ribosomal protein bS18 10 76 2.0E-25 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_80890 cf04d37041dbd6b3a9bd4c6e462d3680 79 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 24 74 4.0E-20 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_80890 cf04d37041dbd6b3a9bd4c6e462d3680 79 ProSitePatterns PS00057 Ribosomal protein S18 signature. 25 48 - T 14-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_80890 cf04d37041dbd6b3a9bd4c6e462d3680 79 PRINTS PR00974 Ribosomal protein S18 family signature 50 64 1.9E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_80890 cf04d37041dbd6b3a9bd4c6e462d3680 79 PRINTS PR00974 Ribosomal protein S18 family signature 42 49 1.9E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_80890 cf04d37041dbd6b3a9bd4c6e462d3680 79 PRINTS PR00974 Ribosomal protein S18 family signature 64 74 1.9E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_80890 cf04d37041dbd6b3a9bd4c6e462d3680 79 PRINTS PR00974 Ribosomal protein S18 family signature 32 42 1.9E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_80890 cf04d37041dbd6b3a9bd4c6e462d3680 79 SUPERFAMILY SSF46911 7 76 1.7E-27 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_80890 cf04d37041dbd6b3a9bd4c6e462d3680 79 Gene3D G3DSA:4.10.640.10 1 79 1.0E-27 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_80890 cf04d37041dbd6b3a9bd4c6e462d3680 79 Pfam PF01084 Ribosomal protein S18 22 72 2.0E-24 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_63110 627b48a84f653c80025e97809c88cdad 274 Pfam PF06724 Domain of Unknown Function (DUF1206) 203 272 1.9E-18 T 14-10-2018 IPR009597 Domain of unknown function DUF1206 AMIS_63110 627b48a84f653c80025e97809c88cdad 274 Pfam PF06724 Domain of Unknown Function (DUF1206) 113 178 1.8E-11 T 14-10-2018 IPR009597 Domain of unknown function DUF1206 AMIS_63110 627b48a84f653c80025e97809c88cdad 274 Pfam PF06724 Domain of Unknown Function (DUF1206) 28 93 1.0E-20 T 14-10-2018 IPR009597 Domain of unknown function DUF1206 AMIS_77190 a5c2ab98cf869264d251d83b5cb7808f 307 Pfam PF00480 ROK family 6 301 2.9E-57 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AMIS_77190 a5c2ab98cf869264d251d83b5cb7808f 307 SUPERFAMILY SSF53067 4 304 4.76E-58 T 14-10-2018 AMIS_77190 a5c2ab98cf869264d251d83b5cb7808f 307 Gene3D G3DSA:3.30.420.40 6 298 1.3E-82 T 14-10-2018 AMIS_77190 a5c2ab98cf869264d251d83b5cb7808f 307 Gene3D G3DSA:3.30.420.40 129 285 1.3E-82 T 14-10-2018 AMIS_22900 138ff2634849c3fed958cf3e8f3831a5 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 271 6.4E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_22900 138ff2634849c3fed958cf3e8f3831a5 295 Gene3D G3DSA:1.10.3720.10 19 285 3.6E-46 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_22900 138ff2634849c3fed958cf3e8f3831a5 295 SUPERFAMILY SSF161098 21 279 4.77E-48 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_21990 65d473b3abdf215846b72ef55ad99541 230 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 3 39 2.5E-16 T 14-10-2018 IPR019933 DivIVA domain AMIS_21990 65d473b3abdf215846b72ef55ad99541 230 Pfam PF05103 DivIVA protein 3 55 4.2E-11 T 14-10-2018 IPR007793 DivIVA family AMIS_58470 835403a7dc055f2810b5b62c4d72e27e 275 Gene3D G3DSA:3.40.50.150 13 240 3.5E-33 T 14-10-2018 AMIS_58470 835403a7dc055f2810b5b62c4d72e27e 275 Pfam PF08241 Methyltransferase domain 46 132 4.2E-15 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 AMIS_58470 835403a7dc055f2810b5b62c4d72e27e 275 SUPERFAMILY SSF53335 7 215 5.41E-33 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_52670 5a305fba8a9c11cb39f3f1684bc07e17 226 SUPERFAMILY SSF48317 17 217 4.19E-35 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily AMIS_52670 5a305fba8a9c11cb39f3f1684bc07e17 226 SMART SM00014 97 212 2.2E-20 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMIS_52670 5a305fba8a9c11cb39f3f1684bc07e17 226 Pfam PF01569 PAP2 superfamily 99 216 3.7E-21 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMIS_52670 5a305fba8a9c11cb39f3f1684bc07e17 226 Gene3D G3DSA:1.20.144.10 130 223 1.9E-20 T 14-10-2018 AMIS_52670 5a305fba8a9c11cb39f3f1684bc07e17 226 Gene3D G3DSA:1.20.144.10 16 129 1.0E-7 T 14-10-2018 AMIS_42540 7142708809050d2185cab19cbc98a6e3 245 Gene3D G3DSA:3.40.50.150 2 243 6.2E-54 T 14-10-2018 AMIS_42540 7142708809050d2185cab19cbc98a6e3 245 Pfam PF13649 Methyltransferase domain 42 136 1.2E-15 T 14-10-2018 AMIS_42540 7142708809050d2185cab19cbc98a6e3 245 SUPERFAMILY SSF53335 5 215 5.17E-38 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_13360 c2b9144a0101fad7bd9f53f775be4545 202 Pfam PF00925 GTP cyclohydrolase II 19 169 5.3E-59 T 14-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AMIS_13360 c2b9144a0101fad7bd9f53f775be4545 202 Gene3D G3DSA:3.40.50.10990 5 175 3.1E-63 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AMIS_13360 c2b9144a0101fad7bd9f53f775be4545 202 SUPERFAMILY SSF142695 11 172 5.23E-54 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AMIS_81040 7934de87728fe23e5068c39dbebe2a12 371 SUPERFAMILY SSF82171 127 349 1.26E-13 T 14-10-2018 AMIS_81040 7934de87728fe23e5068c39dbebe2a12 371 Gene3D G3DSA:2.120.10.30 155 355 1.1E-7 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AMIS_18260 8ec4eba475db9ae33776a864d144423e 315 Gene3D G3DSA:3.90.25.10 166 305 3.9E-99 T 14-10-2018 AMIS_18260 8ec4eba475db9ae33776a864d144423e 315 SUPERFAMILY SSF51735 4 304 2.43E-62 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_18260 8ec4eba475db9ae33776a864d144423e 315 Gene3D G3DSA:3.40.50.720 6 298 3.9E-99 T 14-10-2018 AMIS_18260 8ec4eba475db9ae33776a864d144423e 315 Pfam PF05368 NmrA-like family 7 250 1.3E-47 T 14-10-2018 IPR008030 NmrA-like domain Reactome: R-HSA-70635 AMIS_15670 4bc8b8f2126c730243cb277369161901 279 Gene3D G3DSA:3.20.20.70 14 279 1.6E-87 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_15670 4bc8b8f2126c730243cb277369161901 279 SUPERFAMILY SSF51366 15 256 2.67E-74 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AMIS_15670 4bc8b8f2126c730243cb277369161901 279 Pfam PF00290 Tryptophan synthase alpha chain 21 273 1.0E-69 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AMIS_15670 4bc8b8f2126c730243cb277369161901 279 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 21 272 1.8E-61 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AMIS_15670 4bc8b8f2126c730243cb277369161901 279 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 27 275 30.454 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AMIS_4640 97df801e917f44414cad0e7f5abe9084 177 SUPERFAMILY SSF55874 88 161 2.63E-7 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_4640 97df801e917f44414cad0e7f5abe9084 177 Gene3D G3DSA:3.30.565.10 24 177 2.7E-14 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_4640 97df801e917f44414cad0e7f5abe9084 177 Pfam PF13581 Histidine kinase-like ATPase domain 86 173 2.1E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_25570 c24275368d771f55db536c34c4ae3cd3 255 Gene3D G3DSA:3.90.226.10 1 197 3.8E-54 T 14-10-2018 AMIS_25570 c24275368d771f55db536c34c4ae3cd3 255 SUPERFAMILY SSF52096 4 254 2.49E-67 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMIS_25570 c24275368d771f55db536c34c4ae3cd3 255 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 254 6.0E-50 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AMIS_25570 c24275368d771f55db536c34c4ae3cd3 255 Gene3D G3DSA:1.10.12.10 200 254 1.2E-11 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal AMIS_24320 43fdbd8879fc6b7f8b6e58c950ffc09b 286 Pfam PF00248 Aldo/keto reductase family 18 285 2.7E-59 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain AMIS_24320 43fdbd8879fc6b7f8b6e58c950ffc09b 286 Gene3D G3DSA:3.20.20.100 8 286 1.3E-79 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMIS_24320 43fdbd8879fc6b7f8b6e58c950ffc09b 286 SUPERFAMILY SSF51430 13 285 1.57E-72 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMIS_15280 9b9d05a32d5bfdb0bfcf85107905624a 242 Gene3D G3DSA:3.30.110.150 150 233 5.0E-28 T 14-10-2018 IPR038594 SepF-like superfamily AMIS_15280 9b9d05a32d5bfdb0bfcf85107905624a 242 Hamap MF_01197 Cell division protein SepF [sepF]. 1 233 21.916 T 14-10-2018 IPR023052 Cell division protein SepF GO:0090529 AMIS_15280 9b9d05a32d5bfdb0bfcf85107905624a 242 Pfam PF04472 Cell division protein SepF 154 225 2.1E-25 T 14-10-2018 IPR007561 Cell division protein SepF/SepF-related GO:0090529 AMIS_65900 171facb5904a734b8f2a8e94379efb56 312 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 105 306 6.1E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_65900 171facb5904a734b8f2a8e94379efb56 312 Gene3D G3DSA:1.10.3720.10 67 312 3.9E-61 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_65900 171facb5904a734b8f2a8e94379efb56 312 SUPERFAMILY SSF161098 71 299 1.44E-51 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_6380 ac0fdafce845cce9125072811702589a 196 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 2 196 20.32 T 14-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AMIS_6380 ac0fdafce845cce9125072811702589a 196 Gene3D G3DSA:3.20.20.70 6 196 4.3E-49 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_6380 ac0fdafce845cce9125072811702589a 196 Pfam PF02581 Thiamine monophosphate synthase 29 177 2.0E-41 T 14-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AMIS_6380 ac0fdafce845cce9125072811702589a 196 SUPERFAMILY SSF51391 5 194 3.01E-45 T 14-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AMIS_28600 00a2a22e44bf2e693d02667c9eddf525 196 SUPERFAMILY SSF46689 9 79 2.77E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_28600 00a2a22e44bf2e693d02667c9eddf525 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 65 5.3E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_28600 00a2a22e44bf2e693d02667c9eddf525 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 6.0E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_28600 00a2a22e44bf2e693d02667c9eddf525 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 6.0E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_28600 00a2a22e44bf2e693d02667c9eddf525 196 Gene3D G3DSA:1.10.357.10 8 196 4.6E-19 T 14-10-2018 AMIS_65470 6f5f6fb513a271b0ef858900075697c5 302 Pfam PF13354 Beta-lactamase enzyme family 132 241 9.4E-12 T 14-10-2018 AMIS_65470 6f5f6fb513a271b0ef858900075697c5 302 SUPERFAMILY SSF56601 70 296 5.63E-25 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMIS_65470 6f5f6fb513a271b0ef858900075697c5 302 Gene3D G3DSA:3.40.710.10 68 299 3.7E-35 T 14-10-2018 AMIS_80680 f39ff5f288156fc4f28421fca76bfd44 80 SUPERFAMILY SSF54285 3 80 4.19E-10 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AMIS_80680 f39ff5f288156fc4f28421fca76bfd44 80 Gene3D G3DSA:3.10.20.30 1 80 9.6E-12 T 14-10-2018 IPR012675 Beta-grasp domain superfamily AMIS_80680 f39ff5f288156fc4f28421fca76bfd44 80 Pfam PF02597 ThiS family 4 80 1.6E-7 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 AMIS_18790 38413c0586ce58b10b4600f4586a2918 246 Pfam PF00535 Glycosyl transferase family 2 2 166 3.7E-17 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AMIS_18790 38413c0586ce58b10b4600f4586a2918 246 SUPERFAMILY SSF53448 1 222 3.87E-29 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_18790 38413c0586ce58b10b4600f4586a2918 246 Gene3D G3DSA:3.90.550.10 1 241 6.5E-32 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_66740 184a6b0d4d3f8efc362d58ab5165e137 419 Pfam PF13519 von Willebrand factor type A domain 43 159 1.2E-12 T 14-10-2018 IPR002035 von Willebrand factor, type A AMIS_66740 184a6b0d4d3f8efc362d58ab5165e137 419 SUPERFAMILY SSF53300 41 228 4.45E-24 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMIS_66740 184a6b0d4d3f8efc362d58ab5165e137 419 SMART SM00327 38 230 6.2E-21 T 14-10-2018 IPR002035 von Willebrand factor, type A AMIS_66740 184a6b0d4d3f8efc362d58ab5165e137 419 Gene3D G3DSA:3.40.50.410 42 230 5.7E-36 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMIS_76710 07985f68f860accdc8d9080bb0d6cd19 280 Pfam PF05853 beta-keto acid cleavage enzyme 8 276 5.7E-86 T 14-10-2018 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00310+2.3.1.247 AMIS_76710 07985f68f860accdc8d9080bb0d6cd19 280 Gene3D G3DSA:3.20.20.70 2 279 7.5E-88 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_3170 570de566659909860fad9261c3277a31 411 Pfam PF00437 Type II/IV secretion system protein 55 329 3.4E-70 T 14-10-2018 IPR001482 Type II/IV secretion system protein AMIS_3170 570de566659909860fad9261c3277a31 411 Gene3D G3DSA:3.40.50.300 151 360 1.0E-56 T 14-10-2018 AMIS_3170 570de566659909860fad9261c3277a31 411 Gene3D G3DSA:3.30.450.380 10 148 3.1E-25 T 14-10-2018 AMIS_3170 570de566659909860fad9261c3277a31 411 TIGRFAM TIGR03819 heli_sec_ATPase: helicase/secretion neighborhood ATPase 5 339 4.1E-151 T 14-10-2018 IPR022399 Helicase/secretion neighbourhood ATPase AMIS_3170 570de566659909860fad9261c3277a31 411 SUPERFAMILY SSF52540 37 329 1.84E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_49050 19dc0cd67cd128c2c69ad38cb211fc69 368 Pfam PF00296 Luciferase-like monooxygenase 1 293 3.8E-56 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMIS_49050 19dc0cd67cd128c2c69ad38cb211fc69 368 SUPERFAMILY SSF51679 1 333 2.22E-70 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_49050 19dc0cd67cd128c2c69ad38cb211fc69 368 Gene3D G3DSA:3.20.20.30 1 341 4.0E-67 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_49050 19dc0cd67cd128c2c69ad38cb211fc69 368 TIGRFAM TIGR04036 LLM_CE1758_fam: putative luciferase-like monooxygenase, FMN-dependent, CE1758 family 1 354 3.9E-215 T 14-10-2018 IPR023934 Luciferase-like monooxygenase, FMN-dependent, putative AMIS_46510 86593927a35377815e6abe77b786c6a0 323 Gene3D G3DSA:3.40.1190.20 4 323 2.1E-85 T 14-10-2018 IPR029056 Ribokinase-like AMIS_46510 86593927a35377815e6abe77b786c6a0 323 Pfam PF00294 pfkB family carbohydrate kinase 236 304 5.0E-10 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB AMIS_46510 86593927a35377815e6abe77b786c6a0 323 Pfam PF00294 pfkB family carbohydrate kinase 12 207 4.4E-7 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB AMIS_46510 86593927a35377815e6abe77b786c6a0 323 SUPERFAMILY SSF53613 10 312 1.87E-49 T 14-10-2018 IPR029056 Ribokinase-like AMIS_63000 d22db44f0e76b3d73752130924b53904 756 Gene3D G3DSA:2.80.10.50 619 754 1.0E-21 T 14-10-2018 AMIS_63000 d22db44f0e76b3d73752130924b53904 756 Pfam PF14200 Ricin-type beta-trefoil lectin domain-like 654 728 2.1E-9 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_63000 d22db44f0e76b3d73752130924b53904 756 SUPERFAMILY SSF49265 540 595 8.56E-6 T 14-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 AMIS_63000 d22db44f0e76b3d73752130924b53904 756 SUPERFAMILY SSF50370 615 752 7.99E-22 T 14-10-2018 IPR035992 Ricin B-like lectins AMIS_63000 d22db44f0e76b3d73752130924b53904 756 Gene3D G3DSA:2.60.40.10 535 605 1.6E-6 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_63000 d22db44f0e76b3d73752130924b53904 756 SMART SM00458 619 754 1.5E-5 T 14-10-2018 IPR000772 Ricin B, lectin domain AMIS_47200 dfe745687a671e4c12682caeb4ef107f 225 Pfam PF07920 Protein of unknown function (DUF1684) 82 219 9.6E-41 T 14-10-2018 IPR012467 Protein of unknown function DUF1684 AMIS_26360 187c57b3a559ef59f4e549b8965da4d4 388 Gene3D G3DSA:3.20.20.80 1 220 3.2E-65 T 14-10-2018 AMIS_26360 187c57b3a559ef59f4e549b8965da4d4 388 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 8 22 - T 14-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site AMIS_26360 187c57b3a559ef59f4e549b8965da4d4 388 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 300 308 - T 14-10-2018 IPR018120 Glycoside hydrolase family 1, active site AMIS_26360 187c57b3a559ef59f4e549b8965da4d4 388 PRINTS PR00131 Glycosyl hydrolase family 1 signature 357 369 1.4E-17 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMIS_26360 187c57b3a559ef59f4e549b8965da4d4 388 PRINTS PR00131 Glycosyl hydrolase family 1 signature 300 308 1.4E-17 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMIS_26360 187c57b3a559ef59f4e549b8965da4d4 388 PRINTS PR00131 Glycosyl hydrolase family 1 signature 312 323 1.4E-17 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMIS_26360 187c57b3a559ef59f4e549b8965da4d4 388 PRINTS PR00131 Glycosyl hydrolase family 1 signature 243 257 1.4E-17 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMIS_26360 187c57b3a559ef59f4e549b8965da4d4 388 PRINTS PR00131 Glycosyl hydrolase family 1 signature 333 350 1.4E-17 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMIS_26360 187c57b3a559ef59f4e549b8965da4d4 388 Pfam PF00232 Glycosyl hydrolase family 1 271 385 2.9E-29 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMIS_26360 187c57b3a559ef59f4e549b8965da4d4 388 Pfam PF00232 Glycosyl hydrolase family 1 3 213 6.3E-49 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMIS_26360 187c57b3a559ef59f4e549b8965da4d4 388 SUPERFAMILY SSF51445 3 385 6.09E-111 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_26360 187c57b3a559ef59f4e549b8965da4d4 388 Gene3D G3DSA:3.20.20.80 224 388 6.5E-47 T 14-10-2018 AMIS_56540 06f44e1bf32c69e86914a1a404e90402 144 Gene3D G3DSA:1.10.10.10 2 144 4.0E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_56540 06f44e1bf32c69e86914a1a404e90402 144 Pfam PF01047 MarR family 36 93 1.5E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_56540 06f44e1bf32c69e86914a1a404e90402 144 SUPERFAMILY SSF46785 11 141 6.64E-28 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_56540 06f44e1bf32c69e86914a1a404e90402 144 SMART SM00347 29 129 6.7E-23 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMIS_1140 93dcc1b3abe12e6f3062b161f0f915aa 150 SUPERFAMILY SSF55718 42 148 2.31E-19 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily AMIS_1140 93dcc1b3abe12e6f3062b161f0f915aa 150 Pfam PF02036 SCP-2 sterol transfer family 54 146 1.3E-12 T 14-10-2018 IPR003033 SCP2 sterol-binding domain AMIS_1140 93dcc1b3abe12e6f3062b161f0f915aa 150 Gene3D G3DSA:3.30.1050.10 38 147 5.4E-22 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily AMIS_7470 be28bf03bbe53eb9ae77c58be679eeff 338 Gene3D G3DSA:3.20.20.40 50 338 8.5E-94 T 14-10-2018 IPR036434 1, 4-beta cellobiohydrolase superfamily GO:0004553|GO:0030245 AMIS_7470 be28bf03bbe53eb9ae77c58be679eeff 338 SUPERFAMILY SSF51989 50 337 1.13E-82 T 14-10-2018 IPR036434 1, 4-beta cellobiohydrolase superfamily GO:0004553|GO:0030245 AMIS_7470 be28bf03bbe53eb9ae77c58be679eeff 338 PIRSF PIRSF001100 11 338 3.2E-86 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 AMIS_7470 be28bf03bbe53eb9ae77c58be679eeff 338 PRINTS PR00733 Glycosyl hydrolase family 6 signature 71 90 6.0E-36 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 AMIS_7470 be28bf03bbe53eb9ae77c58be679eeff 338 PRINTS PR00733 Glycosyl hydrolase family 6 signature 198 211 6.0E-36 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 AMIS_7470 be28bf03bbe53eb9ae77c58be679eeff 338 PRINTS PR00733 Glycosyl hydrolase family 6 signature 302 316 6.0E-36 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 AMIS_7470 be28bf03bbe53eb9ae77c58be679eeff 338 PRINTS PR00733 Glycosyl hydrolase family 6 signature 278 298 6.0E-36 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 AMIS_7470 be28bf03bbe53eb9ae77c58be679eeff 338 PRINTS PR00733 Glycosyl hydrolase family 6 signature 141 156 6.0E-36 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 AMIS_7470 be28bf03bbe53eb9ae77c58be679eeff 338 PRINTS PR00733 Glycosyl hydrolase family 6 signature 113 126 6.0E-36 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 AMIS_7470 be28bf03bbe53eb9ae77c58be679eeff 338 PRINTS PR00733 Glycosyl hydrolase family 6 signature 228 238 6.0E-36 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 AMIS_7470 be28bf03bbe53eb9ae77c58be679eeff 338 PRINTS PR00733 Glycosyl hydrolase family 6 signature 258 271 6.0E-36 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 AMIS_7470 be28bf03bbe53eb9ae77c58be679eeff 338 Pfam PF01341 Glycosyl hydrolases family 6 64 325 7.1E-74 T 14-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 AMIS_26730 86482685571b21b79de6540df1059414 103 Gene3D G3DSA:3.30.70.100 1 96 2.6E-8 T 14-10-2018 AMIS_26730 86482685571b21b79de6540df1059414 103 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 74 2.3E-5 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain AMIS_26730 86482685571b21b79de6540df1059414 103 SUPERFAMILY SSF54909 1 77 3.07E-11 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel AMIS_24620 b1633a665d4493102c727e6d5fcd4749 319 Gene3D G3DSA:3.30.420.40 5 113 2.8E-25 T 14-10-2018 AMIS_24620 b1633a665d4493102c727e6d5fcd4749 319 Pfam PF00480 ROK family 12 299 4.2E-47 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AMIS_24620 b1633a665d4493102c727e6d5fcd4749 319 Gene3D G3DSA:3.30.420.40 114 301 1.0E-35 T 14-10-2018 AMIS_24620 b1633a665d4493102c727e6d5fcd4749 319 SUPERFAMILY SSF53067 12 302 6.74E-46 T 14-10-2018 AMIS_28850 98729f3d6b9bb2e3a6671b629b3381ae 132 SMART SM00448 4 116 7.2E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_28850 98729f3d6b9bb2e3a6671b629b3381ae 132 Gene3D G3DSA:3.40.50.12740 5 130 6.6E-34 T 14-10-2018 AMIS_28850 98729f3d6b9bb2e3a6671b629b3381ae 132 Pfam PF00072 Response regulator receiver domain 6 116 1.1E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_28850 98729f3d6b9bb2e3a6671b629b3381ae 132 SUPERFAMILY SSF52172 6 125 1.22E-33 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_7810 9e4f2dffdfe6ae769f0cc2c443e1c980 118 SUPERFAMILY SSF54593 3 117 6.6E-15 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_7810 9e4f2dffdfe6ae769f0cc2c443e1c980 118 Gene3D G3DSA:3.10.180.10 2 118 3.5E-25 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_53830 adc9a3a187a375b1d6a2faf018b15986 429 Gene3D G3DSA:3.40.50.1820 144 427 9.8E-26 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_53830 adc9a3a187a375b1d6a2faf018b15986 429 SUPERFAMILY SSF53474 125 421 5.57E-28 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_53830 adc9a3a187a375b1d6a2faf018b15986 429 Pfam PF12697 Alpha/beta hydrolase family 166 422 7.0E-9 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_46860 559ce355f4986960b88db46d5ab69db2 189 Pfam PF13671 AAA domain 5 122 3.7E-8 T 14-10-2018 AMIS_46860 559ce355f4986960b88db46d5ab69db2 189 SUPERFAMILY SSF52540 2 122 2.13E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_46860 559ce355f4986960b88db46d5ab69db2 189 Gene3D G3DSA:3.40.50.300 2 166 1.5E-23 T 14-10-2018 AMIS_68280 f744d99c573cf6b099b8c09915123a63 233 Pfam PF06778 Chlorite dismutase 35 222 1.2E-73 T 14-10-2018 IPR010644 Putative heme-dependent peroxidase/Chlorite dismutase AMIS_68280 f744d99c573cf6b099b8c09915123a63 233 SUPERFAMILY SSF54909 10 232 3.75E-75 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel AMIS_68280 f744d99c573cf6b099b8c09915123a63 233 Gene3D G3DSA:3.30.70.1100 129 232 1.8E-35 T 14-10-2018 AMIS_37040 37aca60866d8adc59ed6d800b2fc21ef 300 Gene3D G3DSA:3.40.50.12370 13 296 2.0E-65 T 14-10-2018 AMIS_37040 37aca60866d8adc59ed6d800b2fc21ef 300 Pfam PF00582 Universal stress protein family 161 293 2.0E-15 T 14-10-2018 IPR006016 UspA AMIS_37040 37aca60866d8adc59ed6d800b2fc21ef 300 Pfam PF00582 Universal stress protein family 14 153 5.3E-23 T 14-10-2018 IPR006016 UspA AMIS_37040 37aca60866d8adc59ed6d800b2fc21ef 300 SUPERFAMILY SSF52402 161 294 2.34E-19 T 14-10-2018 AMIS_37040 37aca60866d8adc59ed6d800b2fc21ef 300 SUPERFAMILY SSF52402 14 156 9.21E-29 T 14-10-2018 AMIS_37040 37aca60866d8adc59ed6d800b2fc21ef 300 PRINTS PR01438 Universal stress protein signature 13 31 4.3E-12 T 14-10-2018 IPR006015 Universal stress protein A AMIS_37040 37aca60866d8adc59ed6d800b2fc21ef 300 PRINTS PR01438 Universal stress protein signature 131 153 4.3E-12 T 14-10-2018 IPR006015 Universal stress protein A AMIS_37040 37aca60866d8adc59ed6d800b2fc21ef 300 PRINTS PR01438 Universal stress protein signature 114 126 4.3E-12 T 14-10-2018 IPR006015 Universal stress protein A AMIS_14110 ce894a4ba707b07a71e06f93b78f05ee 325 Pfam PF00294 pfkB family carbohydrate kinase 27 295 6.9E-35 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB AMIS_14110 ce894a4ba707b07a71e06f93b78f05ee 325 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 47 71 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AMIS_14110 ce894a4ba707b07a71e06f93b78f05ee 325 SUPERFAMILY SSF53613 1 295 2.49E-50 T 14-10-2018 IPR029056 Ribokinase-like AMIS_14110 ce894a4ba707b07a71e06f93b78f05ee 325 Gene3D G3DSA:3.40.1190.20 1 322 1.7E-75 T 14-10-2018 IPR029056 Ribokinase-like AMIS_62940 583d6d47e8490b2febc6debe6195e861 170 Gene3D G3DSA:3.30.428.10 2 169 2.0E-53 T 14-10-2018 IPR036265 HIT-like superfamily AMIS_62940 583d6d47e8490b2febc6debe6195e861 170 SUPERFAMILY SSF54197 29 167 2.32E-40 T 14-10-2018 IPR036265 HIT-like superfamily AMIS_62940 583d6d47e8490b2febc6debe6195e861 170 Pfam PF01230 HIT domain 44 135 2.8E-14 T 14-10-2018 IPR001310 Histidine triad (HIT) protein AMIS_66180 528cb353c812c183f98010364c7ff19d 401 SMART SM00387 280 401 1.8E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_66180 528cb353c812c183f98010364c7ff19d 401 PIRSF PIRSF037434 1 372 4.5E-68 T 14-10-2018 IPR017205 Signal transduction histidine kinase, ChrS AMIS_66180 528cb353c812c183f98010364c7ff19d 401 SUPERFAMILY SSF55874 247 361 5.61E-15 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_66180 528cb353c812c183f98010364c7ff19d 401 Gene3D G3DSA:3.30.565.10 249 370 3.4E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_66180 528cb353c812c183f98010364c7ff19d 401 Pfam PF07730 Histidine kinase 181 242 1.7E-11 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMIS_42080 f19604f6d65b9eea99e32696620405d9 269 Pfam PF04672 S-adenosyl methyltransferase 8 268 2.9E-95 T 14-10-2018 IPR006764 S-adenosyl-L-methionine dependent methyltransferase, SAV2177 type AMIS_42080 f19604f6d65b9eea99e32696620405d9 269 Gene3D G3DSA:3.40.50.150 1 269 1.3E-105 T 14-10-2018 AMIS_42080 f19604f6d65b9eea99e32696620405d9 269 PIRSF PIRSF017393 1 269 9.3E-97 T 14-10-2018 IPR006764 S-adenosyl-L-methionine dependent methyltransferase, SAV2177 type AMIS_42080 f19604f6d65b9eea99e32696620405d9 269 SUPERFAMILY SSF53335 13 252 1.17E-44 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_43130 8d5b7653f75b93ce694c6353e57efbeb 355 SUPERFAMILY SSF51735 139 321 6.91E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_43130 8d5b7653f75b93ce694c6353e57efbeb 355 SUPERFAMILY SSF50129 1 167 3.74E-44 T 14-10-2018 IPR011032 GroES-like superfamily AMIS_43130 8d5b7653f75b93ce694c6353e57efbeb 355 Gene3D G3DSA:3.40.50.720 147 299 1.3E-87 T 14-10-2018 AMIS_43130 8d5b7653f75b93ce694c6353e57efbeb 355 SMART SM00829 10 351 3.2E-6 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMIS_43130 8d5b7653f75b93ce694c6353e57efbeb 355 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AMIS_43130 8d5b7653f75b93ce694c6353e57efbeb 355 Pfam PF00107 Zinc-binding dehydrogenase 176 314 1.5E-26 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMIS_43130 8d5b7653f75b93ce694c6353e57efbeb 355 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 127 4.3E-28 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMIS_43130 8d5b7653f75b93ce694c6353e57efbeb 355 Gene3D G3DSA:3.90.180.10 15 336 1.3E-87 T 14-10-2018 AMIS_53540 b38787c0e784f5177b58fc4c227fac73 360 Pfam PF12982 Protein of unknown function (DUF3866) 32 352 2.1E-128 T 14-10-2018 IPR024479 Protein of unknown function DUF3866 AMIS_25580 5d339f2af2639ff45260d20687273ae9 354 SUPERFAMILY SSF48452 21 134 1.42E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_25580 5d339f2af2639ff45260d20687273ae9 354 Pfam PF13424 Tetratricopeptide repeat 27 87 8.2E-9 T 14-10-2018 AMIS_25580 5d339f2af2639ff45260d20687273ae9 354 Gene3D G3DSA:1.25.40.10 12 150 6.5E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_10890 c5300358da387a64c77298871115d8ba 470 Gene3D G3DSA:3.40.50.2000 30 456 2.9E-163 T 14-10-2018 AMIS_10890 c5300358da387a64c77298871115d8ba 470 Gene3D G3DSA:3.40.50.2000 237 445 2.9E-163 T 14-10-2018 AMIS_10890 c5300358da387a64c77298871115d8ba 470 SUPERFAMILY SSF53756 6 459 9.42E-141 T 14-10-2018 AMIS_10890 c5300358da387a64c77298871115d8ba 470 Pfam PF00982 Glycosyltransferase family 20 6 459 6.3E-145 T 14-10-2018 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 KEGG: 00500+2.4.1.15 AMIS_25900 9fc091604e3417d40ec5b329d2362ca7 149 SUPERFAMILY SSF54637 11 143 5.81E-25 T 14-10-2018 IPR029069 HotDog domain superfamily AMIS_25900 9fc091604e3417d40ec5b329d2362ca7 149 Gene3D G3DSA:3.10.129.10 6 143 1.7E-23 T 14-10-2018 AMIS_25900 9fc091604e3417d40ec5b329d2362ca7 149 Pfam PF03061 Thioesterase superfamily 26 108 2.7E-10 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AMIS_57770 0d00697897d8a4889f98539fa1ac5a29 322 SUPERFAMILY SSF55961 1 148 1.56E-32 T 14-10-2018 AMIS_57770 0d00697897d8a4889f98539fa1ac5a29 322 Gene3D G3DSA:3.30.530.20 1 156 3.9E-44 T 14-10-2018 IPR023393 START-like domain superfamily AMIS_57770 0d00697897d8a4889f98539fa1ac5a29 322 Pfam PF06240 Carbon monoxide dehydrogenase subunit G (CoxG) 6 146 6.2E-20 T 14-10-2018 IPR010419 Carbon monoxide dehydrogenase subunit G AMIS_57920 ca51ec413bfc2bc70d1bb105d3c6d5e4 204 Pfam PF14273 Domain of unknown function (DUF4360) 27 204 1.6E-59 T 14-10-2018 IPR025649 Protein of unknown function DUF4360 AMIS_1460 21413f87183440456c1f76e95838b99c 493 Gene3D G3DSA:3.50.50.60 8 123 1.2E-25 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_1460 21413f87183440456c1f76e95838b99c 493 Gene3D G3DSA:3.50.50.60 203 329 2.4E-20 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_1460 21413f87183440456c1f76e95838b99c 493 PRINTS PR00419 Adrenodoxin reductase family signature 10 32 2.4E-6 T 14-10-2018 AMIS_1460 21413f87183440456c1f76e95838b99c 493 PRINTS PR00419 Adrenodoxin reductase family signature 33 46 2.4E-6 T 14-10-2018 AMIS_1460 21413f87183440456c1f76e95838b99c 493 TIGRFAM TIGR02734 crtI_fam: phytoene desaturase 11 491 5.3E-155 T 14-10-2018 IPR014105 Carotenoid/retinoid oxidoreductase GO:0016117|GO:0055114 AMIS_1460 21413f87183440456c1f76e95838b99c 493 SUPERFAMILY SSF51905 10 488 1.18E-70 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_1460 21413f87183440456c1f76e95838b99c 493 Pfam PF01593 Flavin containing amine oxidoreductase 18 488 7.6E-37 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 AMIS_69060 b7845d39bfe9cfda6939733282961a1c 286 Gene3D G3DSA:3.40.190.10 48 264 6.7E-65 T 14-10-2018 AMIS_69060 b7845d39bfe9cfda6939733282961a1c 286 SMART SM00062 47 270 2.4E-62 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMIS_69060 b7845d39bfe9cfda6939733282961a1c 286 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 48 261 4.5E-48 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMIS_69060 b7845d39bfe9cfda6939733282961a1c 286 Gene3D G3DSA:3.40.190.10 133 232 6.7E-65 T 14-10-2018 AMIS_69060 b7845d39bfe9cfda6939733282961a1c 286 SUPERFAMILY SSF53850 5 264 2.26E-54 T 14-10-2018 AMIS_17620 6b24468f5473a32287f6c39a39af8092 312 PIRSF PIRSF000535 8 310 2.0E-35 T 14-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 AMIS_17620 6b24468f5473a32287f6c39a39af8092 312 Gene3D G3DSA:3.40.1190.20 11 308 3.2E-52 T 14-10-2018 IPR029056 Ribokinase-like AMIS_17620 6b24468f5473a32287f6c39a39af8092 312 SUPERFAMILY SSF53613 29 303 3.9E-42 T 14-10-2018 IPR029056 Ribokinase-like AMIS_17620 6b24468f5473a32287f6c39a39af8092 312 Pfam PF00294 pfkB family carbohydrate kinase 27 292 1.8E-31 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB AMIS_76150 2c8fcbb714bb06e91059ba20dacacdc5 147 SUPERFAMILY SSF141457 25 143 3.27E-31 T 14-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily AMIS_76150 2c8fcbb714bb06e91059ba20dacacdc5 147 Pfam PF02623 FliW protein 26 141 4.3E-30 T 14-10-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 AMIS_76150 2c8fcbb714bb06e91059ba20dacacdc5 147 Gene3D G3DSA:2.30.290.10 23 146 6.2E-32 T 14-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily AMIS_76150 2c8fcbb714bb06e91059ba20dacacdc5 147 Hamap MF_01185 Flagellar assembly factor FliW [fliW]. 24 146 19.355 T 14-10-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 AMIS_15320 76b08ce9bffad5f980d7f6e4bc7d5834 88 Hamap MF_00634 UPF0235 protein YggU [yggU]. 1 86 12.535 T 14-10-2018 IPR003746 Protein of unknown function DUF167 AMIS_15320 76b08ce9bffad5f980d7f6e4bc7d5834 88 Gene3D G3DSA:3.30.1200.10 1 87 2.0E-18 T 14-10-2018 IPR036591 YggU-like superfamily AMIS_15320 76b08ce9bffad5f980d7f6e4bc7d5834 88 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 2 72 3.2E-19 T 14-10-2018 IPR003746 Protein of unknown function DUF167 AMIS_15320 76b08ce9bffad5f980d7f6e4bc7d5834 88 SMART SM01152 1 74 5.3E-19 T 14-10-2018 IPR003746 Protein of unknown function DUF167 AMIS_15320 76b08ce9bffad5f980d7f6e4bc7d5834 88 SUPERFAMILY SSF69786 2 86 1.44E-18 T 14-10-2018 IPR036591 YggU-like superfamily AMIS_47340 3e8c5f7272380bb3236a7221c3bd85d9 412 Pfam PF01566 Natural resistance-associated macrophage protein 37 385 1.3E-115 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 AMIS_47340 3e8c5f7272380bb3236a7221c3bd85d9 412 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 18 377 5.5E-95 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 AMIS_47340 3e8c5f7272380bb3236a7221c3bd85d9 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 124 143 2.4E-37 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 AMIS_47340 3e8c5f7272380bb3236a7221c3bd85d9 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 329 346 2.4E-37 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 AMIS_47340 3e8c5f7272380bb3236a7221c3bd85d9 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 149 170 2.4E-37 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 AMIS_47340 3e8c5f7272380bb3236a7221c3bd85d9 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 301 320 2.4E-37 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 AMIS_47340 3e8c5f7272380bb3236a7221c3bd85d9 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 198 221 2.4E-37 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 AMIS_47340 3e8c5f7272380bb3236a7221c3bd85d9 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 96 122 2.4E-37 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 AMIS_47340 3e8c5f7272380bb3236a7221c3bd85d9 412 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 11 411 34.271 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 AMIS_52660 fa04177c4233973e3435c3b2d70fdd61 250 Gene3D G3DSA:1.20.144.10 131 223 1.9E-18 T 14-10-2018 AMIS_52660 fa04177c4233973e3435c3b2d70fdd61 250 Gene3D G3DSA:1.20.144.10 7 130 5.3E-6 T 14-10-2018 AMIS_52660 fa04177c4233973e3435c3b2d70fdd61 250 SMART SM00014 98 207 8.5E-20 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMIS_52660 fa04177c4233973e3435c3b2d70fdd61 250 Pfam PF01569 PAP2 superfamily 97 210 5.1E-18 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMIS_52660 fa04177c4233973e3435c3b2d70fdd61 250 SUPERFAMILY SSF48317 15 210 1.57E-30 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily AMIS_69690 38c29ab0cde57b818da29ed8f1e49109 235 Gene3D G3DSA:3.30.460.10 7 157 2.3E-16 T 14-10-2018 AMIS_69690 38c29ab0cde57b818da29ed8f1e49109 235 SUPERFAMILY SSF81301 18 116 2.62E-7 T 14-10-2018 AMIS_40890 f748322eeb0351aa668cb2b9574da939 67 Pfam PF09489 Probable cobalt transporter subunit (CbtB) 17 67 1.4E-13 T 14-10-2018 IPR012667 Cobalt transporter subunit CbtB, putative AMIS_59450 69216c3ec851fcb80aeb22ead598398d 421 Gene3D G3DSA:1.50.10.10 9 404 1.8E-31 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 AMIS_59450 69216c3ec851fcb80aeb22ead598398d 421 SUPERFAMILY SSF48208 28 399 2.04E-36 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AMIS_59450 69216c3ec851fcb80aeb22ead598398d 421 Pfam PF12899 Alkaline and neutral invertase 255 400 2.8E-17 T 14-10-2018 IPR024746 Glycosyl hydrolase family 100 GO:0033926 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 AMIS_67930 58d0d84029376009600075345aa270be 390 Gene3D G3DSA:3.60.21.10 1 283 5.8E-68 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like AMIS_67930 58d0d84029376009600075345aa270be 390 SUPERFAMILY SSF56300 1 298 5.45E-49 T 14-10-2018 AMIS_67930 58d0d84029376009600075345aa270be 390 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 259 1.7E-50 T 14-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 AMIS_67930 58d0d84029376009600075345aa270be 390 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 288 367 1.2E-7 T 14-10-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain AMIS_67930 58d0d84029376009600075345aa270be 390 Pfam PF00149 Calcineurin-like phosphoesterase 1 95 1.8E-12 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AMIS_1290 1695ba0c514398bde2a73af3e2a805ff 123 TIGRFAM TIGR03666 Rv2061_F420: PPOX class probable F420-dependent enzyme, Rv2061 family 4 120 1.6E-45 T 14-10-2018 IPR019965 PPOX class F420-dependent enzyme, family Rv2061, putative AMIS_1290 1695ba0c514398bde2a73af3e2a805ff 123 Gene3D G3DSA:2.30.110.10 3 122 4.5E-16 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AMIS_1290 1695ba0c514398bde2a73af3e2a805ff 123 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 6 80 2.9E-6 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AMIS_1290 1695ba0c514398bde2a73af3e2a805ff 123 SUPERFAMILY SSF50475 5 120 6.68E-17 T 14-10-2018 AMIS_28060 385da2ef3b254f5a55c7eeb2cb458f80 206 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_28060 385da2ef3b254f5a55c7eeb2cb458f80 206 SMART SM00382 26 204 1.3E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_28060 385da2ef3b254f5a55c7eeb2cb458f80 206 Pfam PF00005 ABC transporter 17 157 4.2E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_28060 385da2ef3b254f5a55c7eeb2cb458f80 206 Gene3D G3DSA:3.40.50.300 1 203 1.0E-47 T 14-10-2018 AMIS_28060 385da2ef3b254f5a55c7eeb2cb458f80 206 SUPERFAMILY SSF52540 2 200 9.35E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_53670 014d2213cf6125f1a93e61d13abce24e 395 Pfam PF13398 Peptidase M50B-like 72 139 1.7E-5 T 14-10-2018 AMIS_53670 014d2213cf6125f1a93e61d13abce24e 395 PIRSF PIRSF006404 14 383 3.4E-68 T 14-10-2018 IPR016483 Uncharacterised conserved protein UCP006404, peptidase M50/CBS AMIS_4670 3ce4e75d67717f31bf5a915c1bd06bc3 344 Gene3D G3DSA:3.40.50.2300 34 302 9.8E-68 T 14-10-2018 AMIS_4670 3ce4e75d67717f31bf5a915c1bd06bc3 344 Pfam PF13407 Periplasmic binding protein domain 33 301 5.7E-47 T 14-10-2018 IPR025997 Periplasmic binding protein AMIS_4670 3ce4e75d67717f31bf5a915c1bd06bc3 344 SUPERFAMILY SSF53822 31 326 1.3E-64 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_4670 3ce4e75d67717f31bf5a915c1bd06bc3 344 Gene3D G3DSA:3.40.50.2300 136 283 9.8E-68 T 14-10-2018 AMIS_1300 d5314565e897d9fb865fece379aaecdf 246 Pfam PF13649 Methyltransferase domain 67 157 2.9E-7 T 14-10-2018 AMIS_1300 d5314565e897d9fb865fece379aaecdf 246 Gene3D G3DSA:3.40.50.150 42 242 8.0E-19 T 14-10-2018 AMIS_1300 d5314565e897d9fb865fece379aaecdf 246 SUPERFAMILY SSF53335 44 236 4.67E-18 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_74530 87aafc0e29be91eae4edbc7db07bd08d 240 Pfam PF09335 SNARE associated Golgi protein 31 158 9.2E-12 T 14-10-2018 IPR032816 SNARE associated Golgi protein AMIS_29640 9894333f10b1a31b6a2b68cf20e3adef 275 SUPERFAMILY SSF56529 57 272 3.66E-71 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AMIS_29640 9894333f10b1a31b6a2b68cf20e3adef 275 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 68 270 4.2E-66 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 AMIS_29640 9894333f10b1a31b6a2b68cf20e3adef 275 Gene3D G3DSA:3.90.850.10 62 275 1.9E-76 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AMIS_58840 e9ba90cb71d13f8873105d673beca73b 317 Gene3D G3DSA:3.40.50.1820 10 301 1.7E-45 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_58840 e9ba90cb71d13f8873105d673beca73b 317 Pfam PF10503 Esterase PHB depolymerase 38 232 1.3E-24 T 14-10-2018 IPR010126 Esterase, PHB depolymerase GO:0005576|GO:0016787 AMIS_58840 e9ba90cb71d13f8873105d673beca73b 317 SUPERFAMILY SSF53474 16 130 2.46E-9 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_58840 e9ba90cb71d13f8873105d673beca73b 317 TIGRFAM TIGR01840 esterase_phb: esterase, PHB depolymerase family 36 251 6.2E-45 T 14-10-2018 IPR010126 Esterase, PHB depolymerase GO:0005576|GO:0016787 AMIS_58840 e9ba90cb71d13f8873105d673beca73b 317 SUPERFAMILY SSF53474 129 314 4.42E-32 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_77770 4e21f7bc67dc4c1ce8735f0721362832 277 Gene3D G3DSA:3.40.50.620 1 175 1.9E-68 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMIS_77770 4e21f7bc67dc4c1ce8735f0721362832 277 Hamap MF_00158 Pantothenate synthetase [panC]. 3 271 37.056 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 AMIS_77770 4e21f7bc67dc4c1ce8735f0721362832 277 Gene3D G3DSA:3.30.1300.10 176 277 2.4E-34 T 14-10-2018 AMIS_77770 4e21f7bc67dc4c1ce8735f0721362832 277 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 14 269 6.8E-81 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 AMIS_77770 4e21f7bc67dc4c1ce8735f0721362832 277 SUPERFAMILY SSF52374 11 274 2.28E-95 T 14-10-2018 AMIS_77770 4e21f7bc67dc4c1ce8735f0721362832 277 Pfam PF02569 Pantoate-beta-alanine ligase 7 269 2.5E-91 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 AMIS_28730 5177735521b271a1a41d4e6a36a21a45 204 Gene3D G3DSA:3.40.430.10 2 182 8.5E-37 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AMIS_28730 5177735521b271a1a41d4e6a36a21a45 204 Pfam PF01872 RibD C-terminal domain 3 178 4.9E-20 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 AMIS_28730 5177735521b271a1a41d4e6a36a21a45 204 SUPERFAMILY SSF53597 3 183 1.18E-26 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AMIS_24510 532a7b10a288ba9d1ff5a2618d9af9a9 192 Pfam PF09819 ABC-type cobalt transport system, permease component 10 119 1.3E-18 T 14-10-2018 IPR017195 ABC-type thiamin-related transport system, permease component 1, predicted AMIS_34300 46a23f60bae527807decdf59eb9db8dd 283 Pfam PF02811 PHP domain 10 221 7.6E-9 T 14-10-2018 IPR004013 PHP domain GO:0003824 AMIS_34300 46a23f60bae527807decdf59eb9db8dd 283 SUPERFAMILY SSF89550 9 271 5.76E-28 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AMIS_34300 46a23f60bae527807decdf59eb9db8dd 283 Gene3D G3DSA:3.20.20.140 8 274 2.3E-49 T 14-10-2018 AMIS_43400 79f4e0579e0e7fa811e67ecca227399e 356 Gene3D G3DSA:3.90.180.10 18 136 8.6E-7 T 14-10-2018 AMIS_43400 79f4e0579e0e7fa811e67ecca227399e 356 Pfam PF11017 Protein of unknown function (DUF2855) 40 345 5.7E-100 T 14-10-2018 IPR021276 Protein of unknown function DUF2855 AMIS_43400 79f4e0579e0e7fa811e67ecca227399e 356 SUPERFAMILY SSF50129 18 114 7.61E-5 T 14-10-2018 IPR011032 GroES-like superfamily AMIS_43400 79f4e0579e0e7fa811e67ecca227399e 356 Gene3D G3DSA:3.40.50.720 154 278 8.6E-7 T 14-10-2018 AMIS_45030 170c39bf34a7fe4f11e1157a0016b931 239 SUPERFAMILY SSF53335 6 229 1.66E-42 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_45030 170c39bf34a7fe4f11e1157a0016b931 239 Gene3D G3DSA:3.40.50.150 4 180 2.5E-39 T 14-10-2018 AMIS_45030 170c39bf34a7fe4f11e1157a0016b931 239 Pfam PF08241 Methyltransferase domain 17 117 3.6E-22 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 AMIS_34340 0204a4bff69934e0bb6104fa0986ee8e 159 Pfam PF09851 Short C-terminal domain 133 159 2.4E-6 T 14-10-2018 IPR018649 SHOCT domain AMIS_36140 c048e5b9eaf20a397b85d4c5dd8e593e 390 Pfam PF02687 FtsX-like permease family 298 383 2.0E-8 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AMIS_36140 c048e5b9eaf20a397b85d4c5dd8e593e 390 Pfam PF12704 MacB-like periplasmic core domain 21 236 2.5E-36 T 14-10-2018 IPR025857 MacB-like periplasmic core domain AMIS_18910 7e9f491ff6b5fc6cbc08aa1912777e49 502 Pfam PF00144 Beta-lactamase 42 362 2.2E-63 T 14-10-2018 IPR001466 Beta-lactamase-related AMIS_18910 7e9f491ff6b5fc6cbc08aa1912777e49 502 SUPERFAMILY SSF56601 33 367 4.4E-76 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMIS_18910 7e9f491ff6b5fc6cbc08aa1912777e49 502 Gene3D G3DSA:3.40.710.10 35 367 1.9E-80 T 14-10-2018 AMIS_7290 106635761eced3862be1bf9387bcad6c 311 Pfam PF13469 Sulfotransferase family 5 237 4.7E-15 T 14-10-2018 AMIS_7290 106635761eced3862be1bf9387bcad6c 311 Gene3D G3DSA:3.40.50.300 1 291 1.2E-29 T 14-10-2018 AMIS_7290 106635761eced3862be1bf9387bcad6c 311 SUPERFAMILY SSF52540 4 304 2.92E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_78230 deaada72da39dc8b2b87d669188a25f6 292 SUPERFAMILY SSF56281 36 281 6.5E-48 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMIS_78230 deaada72da39dc8b2b87d669188a25f6 292 Gene3D G3DSA:3.60.15.10 125 240 5.7E-28 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMIS_78230 deaada72da39dc8b2b87d669188a25f6 292 Gene3D G3DSA:3.60.15.10 38 124 2.0E-11 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMIS_78230 deaada72da39dc8b2b87d669188a25f6 292 Pfam PF00753 Metallo-beta-lactamase superfamily 50 212 1.6E-14 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMIS_78230 deaada72da39dc8b2b87d669188a25f6 292 SMART SM00849 53 212 1.2E-25 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMIS_60240 3ac01b572eca29c2ebefacd92fbbfd05 1648 Gene3D G3DSA:3.40.50.150 964 1178 1.0E-6 T 14-10-2018 AMIS_60240 3ac01b572eca29c2ebefacd92fbbfd05 1648 SUPERFAMILY SSF53335 293 1148 2.49E-35 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_60240 3ac01b572eca29c2ebefacd92fbbfd05 1648 Gene3D G3DSA:3.40.50.150 529 704 2.7E-16 T 14-10-2018 AMIS_48480 82a580d7872606b5c926e15ea8ba794a 465 Pfam PF13751 Transposase DDE domain 319 439 1.9E-27 T 14-10-2018 IPR025668 Transposase DDE domain AMIS_72290 c0133403a6b477011531f41402fcc490 337 Gene3D G3DSA:3.20.20.80 42 337 1.9E-78 T 14-10-2018 AMIS_72290 c0133403a6b477011531f41402fcc490 337 SUPERFAMILY SSF51445 71 307 2.81E-12 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_76450 b543ca47dcbc66375af59012793627bb 99 Pfam PF06289 Flagellar protein (FlbD) 2 57 5.2E-22 T 14-10-2018 IPR009384 Swarming motility protein SwrD-like AMIS_13970 f867c48987848847a52de300a8ec228e 332 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 257 269 3.9E-5 T 14-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 AMIS_13970 f867c48987848847a52de300a8ec228e 332 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 203 209 3.9E-5 T 14-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 AMIS_13970 f867c48987848847a52de300a8ec228e 332 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 109 119 3.9E-5 T 14-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 AMIS_13970 f867c48987848847a52de300a8ec228e 332 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 270 283 3.9E-5 T 14-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 AMIS_13970 f867c48987848847a52de300a8ec228e 332 Pfam PF00248 Aldo/keto reductase family 15 314 1.9E-75 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain AMIS_13970 f867c48987848847a52de300a8ec228e 332 SUPERFAMILY SSF51430 1 315 8.77E-97 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMIS_13970 f867c48987848847a52de300a8ec228e 332 Gene3D G3DSA:3.20.20.100 1 326 4.8E-112 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMIS_37310 aa904054ec7054f902d1d958cd1296c2 358 Gene3D G3DSA:1.25.40.10 174 358 3.4E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_22660 034a36c8f86caf2ddc55d85396db1f1f 272 Pfam PF14417 MEDS: MEthanogen/methylotroph, DcmR Sensory domain 14 165 1.3E-37 T 14-10-2018 IPR025847 MEDS domain AMIS_22660 034a36c8f86caf2ddc55d85396db1f1f 272 Pfam PF13466 STAS domain 191 269 2.5E-9 T 14-10-2018 IPR002645 STAS domain AMIS_22660 034a36c8f86caf2ddc55d85396db1f1f 272 SUPERFAMILY SSF52091 191 269 1.35E-6 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_22660 034a36c8f86caf2ddc55d85396db1f1f 272 Gene3D G3DSA:3.30.750.24 185 272 5.1E-11 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_43500 bdaca267263bede3a05f02200f1ed695 311 TIGRFAM TIGR02156 PA_CoA_Oxy1: phenylacetate-CoA oxygenase, PaaG subunit 5 293 5.5E-155 T 14-10-2018 IPR011881 1,2-phenylacetyl-CoA epoxidase, subunit A GO:0010124|GO:0097266 KEGG: 00360+1.14.13.149 AMIS_43500 bdaca267263bede3a05f02200f1ed695 311 SUPERFAMILY SSF47240 25 268 8.52E-82 T 14-10-2018 IPR009078 Ferritin-like superfamily AMIS_43500 bdaca267263bede3a05f02200f1ed695 311 Pfam PF05138 Phenylacetic acid catabolic protein 15 289 1.8E-101 T 14-10-2018 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 AMIS_43500 bdaca267263bede3a05f02200f1ed695 311 Gene3D G3DSA:1.20.1260.10 2 307 2.5E-129 T 14-10-2018 IPR012347 Ferritin-like AMIS_10730 2d6d55fd998cc9d46c1fb6b8622fda0c 353 Pfam PF03186 CobD/Cbib protein 45 326 7.2E-93 T 14-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 AMIS_10730 2d6d55fd998cc9d46c1fb6b8622fda0c 353 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 42 348 88.532 T 14-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 AMIS_10730 2d6d55fd998cc9d46c1fb6b8622fda0c 353 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 45 300 9.3E-54 T 14-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 AMIS_13640 c5d450b45ac6ff6c445e0d13ce7b0fe9 222 Pfam PF02698 DUF218 domain 41 159 1.4E-10 T 14-10-2018 IPR003848 Domain of unknown function DUF218 AMIS_65510 1ab34ae4494609cdc34fabda0b00ec3a 167 SUPERFAMILY SSF50475 7 163 2.11E-46 T 14-10-2018 AMIS_65510 1ab34ae4494609cdc34fabda0b00ec3a 167 Gene3D G3DSA:2.30.110.10 5 167 9.6E-50 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AMIS_65510 1ab34ae4494609cdc34fabda0b00ec3a 167 SMART SM00903 16 162 3.5E-52 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 AMIS_65510 1ab34ae4494609cdc34fabda0b00ec3a 167 Pfam PF01613 Flavin reductase like domain 17 163 3.0E-41 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 AMIS_12550 6bf4ac135948fa5b3ae7902ef5852d20 418 SUPERFAMILY SSF140453 85 159 1.03E-6 T 14-10-2018 IPR036689 ESAT-6-like superfamily AMIS_2240 3e7f8f954b05bbc7229eb1ecb3ad0352 95 Pfam PF12728 Helix-turn-helix domain 33 83 1.4E-7 T 14-10-2018 AMIS_62700 1554e178c315a0c172126584ab552c03 525 SUPERFAMILY SSF103473 13 402 1.44E-52 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_62700 1554e178c315a0c172126584ab552c03 525 Pfam PF05977 Transmembrane secretion effector 6 521 3.1E-156 T 14-10-2018 IPR010290 Transmembrane secretion effector AMIS_62700 1554e178c315a0c172126584ab552c03 525 Gene3D G3DSA:1.20.1250.20 14 396 1.9E-44 T 14-10-2018 AMIS_10010 7d61efdbc73898be26058d53ce517225 328 SUPERFAMILY SSF161098 82 309 9.16E-47 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_10010 7d61efdbc73898be26058d53ce517225 328 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 310 6.8E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_10010 7d61efdbc73898be26058d53ce517225 328 Gene3D G3DSA:1.10.3720.10 78 325 1.7E-56 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_80030 f4e4ddacfe00ddbb17b3c93cd7467289 196 Pfam PF11611 Domain of unknown function (DUF4352) 71 181 3.9E-19 T 14-10-2018 IPR029051 Domain of unknown function DUF4352 AMIS_80030 f4e4ddacfe00ddbb17b3c93cd7467289 196 Gene3D G3DSA:2.60.40.1240 68 184 9.9E-19 T 14-10-2018 IPR029050 Immunoprotective extracellular, immunoglobulin-like domain superfamily AMIS_46990 844923829da34091362a6cfb71bbcc33 217 Gene3D G3DSA:3.40.50.1820 1 216 2.9E-32 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_46990 844923829da34091362a6cfb71bbcc33 217 Pfam PF12697 Alpha/beta hydrolase family 5 212 1.1E-12 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_46990 844923829da34091362a6cfb71bbcc33 217 SUPERFAMILY SSF53474 5 215 9.33E-24 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_30800 0cbbd3925ab3b4634a94636daea2604b 258 Gene3D G3DSA:1.20.58.1460 175 252 1.2E-5 T 14-10-2018 AMIS_30800 0cbbd3925ab3b4634a94636daea2604b 258 Gene3D G3DSA:1.10.10.10 7 77 4.4E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_35490 1bfaee2b5ef280bfac920aff27be0a24 347 Gene3D G3DSA:1.10.3470.10 19 345 7.8E-86 T 14-10-2018 IPR037294 ABC transporter, BtuC-like AMIS_35490 1bfaee2b5ef280bfac920aff27be0a24 347 SUPERFAMILY SSF81345 17 341 2.35E-75 T 14-10-2018 IPR037294 ABC transporter, BtuC-like AMIS_35490 1bfaee2b5ef280bfac920aff27be0a24 347 Pfam PF01032 FecCD transport family 33 341 1.7E-84 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AMIS_32890 ee7316002e7b2225300660dbcbfaf9ed 519 SUPERFAMILY SSF103473 8 507 8.37E-50 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_32890 ee7316002e7b2225300660dbcbfaf9ed 519 Pfam PF07690 Major Facilitator Superfamily 19 407 7.0E-43 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_32890 ee7316002e7b2225300660dbcbfaf9ed 519 Gene3D G3DSA:1.20.1720.10 13 223 2.0E-33 T 14-10-2018 AMIS_32890 ee7316002e7b2225300660dbcbfaf9ed 519 Gene3D G3DSA:1.20.1250.20 257 432 9.3E-15 T 14-10-2018 AMIS_16350 79fb5dde2b61a46f9e8c505ee16ddbc5 432 Pfam PF05977 Transmembrane secretion effector 17 417 1.1E-24 T 14-10-2018 IPR010290 Transmembrane secretion effector AMIS_16350 79fb5dde2b61a46f9e8c505ee16ddbc5 432 SUPERFAMILY SSF103473 21 414 1.44E-37 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_16350 79fb5dde2b61a46f9e8c505ee16ddbc5 432 Gene3D G3DSA:1.20.1250.20 16 411 5.1E-34 T 14-10-2018 AMIS_80560 d1888a2cd4119d59ebb091fee0a8a5ff 276 SUPERFAMILY SSF55909 9 275 5.3E-48 T 14-10-2018 AMIS_80560 d1888a2cd4119d59ebb091fee0a8a5ff 276 Gene3D G3DSA:3.75.10.10 11 272 3.3E-49 T 14-10-2018 AMIS_80560 d1888a2cd4119d59ebb091fee0a8a5ff 276 Pfam PF02274 Amidinotransferase 67 275 4.7E-14 T 14-10-2018 AMIS_11440 6808362e8d897a45d1de8d1f9a40e9bc 104 SUPERFAMILY SSF141091 1 100 3.79E-34 T 14-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_11440 6808362e8d897a45d1de8d1f9a40e9bc 104 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 102 23.556 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_11440 6808362e8d897a45d1de8d1f9a40e9bc 104 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 100 1.5E-36 T 14-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_11440 6808362e8d897a45d1de8d1f9a40e9bc 104 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 100 2.4E-28 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_11440 6808362e8d897a45d1de8d1f9a40e9bc 104 ProSitePatterns PS01169 Ribosomal protein L21 signature. 71 93 - T 14-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_29510 46d5dc6da9f26e3105b782556371650f 153 Gene3D G3DSA:3.10.180.10 9 151 2.1E-27 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_29510 46d5dc6da9f26e3105b782556371650f 153 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 11 143 5.5E-6 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMIS_29510 46d5dc6da9f26e3105b782556371650f 153 SUPERFAMILY SSF54593 4 145 1.63E-22 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_71620 8139b5baeb09ed618c1431ec264677e5 566 SUPERFAMILY SSF52768 3 295 1.37E-47 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily AMIS_71620 8139b5baeb09ed618c1431ec264677e5 566 Gene3D G3DSA:3.40.800.10 2 299 7.5E-58 T 14-10-2018 AMIS_71620 8139b5baeb09ed618c1431ec264677e5 566 PRINTS PR00116 Arginase signature 225 254 1.1E-6 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 AMIS_71620 8139b5baeb09ed618c1431ec264677e5 566 PRINTS PR00116 Arginase signature 96 111 1.1E-6 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 AMIS_71620 8139b5baeb09ed618c1431ec264677e5 566 Pfam PF00491 Arginase family 4 293 3.4E-29 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 AMIS_3930 4cb066b36addf96ce844c0dce0cc3f2e 202 SUPERFAMILY SSF55469 1 197 7.2E-40 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AMIS_3930 4cb066b36addf96ce844c0dce0cc3f2e 202 Pfam PF00881 Nitroreductase family 7 55 2.6E-10 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AMIS_3930 4cb066b36addf96ce844c0dce0cc3f2e 202 Pfam PF00881 Nitroreductase family 70 170 2.7E-10 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AMIS_3930 4cb066b36addf96ce844c0dce0cc3f2e 202 Gene3D G3DSA:3.40.109.10 4 201 1.7E-38 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AMIS_54120 b9cee67e8947b96e5d616d525c9168f3 254 Gene3D G3DSA:3.40.50.300 52 242 7.0E-18 T 14-10-2018 AMIS_54120 b9cee67e8947b96e5d616d525c9168f3 254 SUPERFAMILY SSF52540 88 248 3.1E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_78990 37aa5da51ff053b170b524d4bec88596 216 Pfam PF03713 Domain of unknown function (DUF305) 68 214 5.2E-28 T 14-10-2018 IPR005183 Domain of unknown function DUF305 AMIS_78990 37aa5da51ff053b170b524d4bec88596 216 Gene3D G3DSA:1.20.1260.10 57 216 1.2E-32 T 14-10-2018 IPR012347 Ferritin-like AMIS_75140 7638989d7a306df9c1bf623ee4bfdb1a 370 SUPERFAMILY SSF49299 44 152 4.19E-5 T 14-10-2018 IPR035986 PKD domain superfamily AMIS_75140 7638989d7a306df9c1bf623ee4bfdb1a 370 Gene3D G3DSA:2.60.40.10 66 151 3.6E-5 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_50130 0c9883ec2edeed21f8cc52bc9e72261b 209 SUPERFAMILY SSF53697 18 185 2.22E-45 T 14-10-2018 AMIS_50130 0c9883ec2edeed21f8cc52bc9e72261b 209 Gene3D G3DSA:3.40.50.10490 3 188 5.1E-63 T 14-10-2018 AMIS_50130 0c9883ec2edeed21f8cc52bc9e72261b 209 Pfam PF13580 SIS domain 19 142 4.0E-26 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AMIS_74740 83efbdc9ce3c8b58a68090f149fdd32d 195 Gene3D G3DSA:3.40.50.300 1 189 2.1E-15 T 14-10-2018 AMIS_74740 83efbdc9ce3c8b58a68090f149fdd32d 195 Pfam PF03029 Conserved hypothetical ATP binding protein 17 184 1.0E-25 T 14-10-2018 IPR004130 GPN-loop GTPase AMIS_74740 83efbdc9ce3c8b58a68090f149fdd32d 195 SUPERFAMILY SSF52540 13 184 1.96E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_67870 9c73f6cde54d2f613583066a33955091 257 Pfam PF13628 Domain of unknown function (DUF4142) 52 185 7.4E-18 T 14-10-2018 IPR025419 Domain of unknown function DUF4142 AMIS_60780 56ccd5d395259634fc5633f9b25d6ae6 369 Pfam PF02616 Segregation and condensation protein ScpA 78 300 5.9E-51 T 14-10-2018 IPR003768 Segregation and condensation protein A AMIS_5780 7c8e977bfb555c71180710fd6952ca14 102 SUPERFAMILY SSF47413 7 45 9.38E-5 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_65400 f8b813cb6e4322eaed3c6ea3cbaca8ab 257 Gene3D G3DSA:3.60.10.10 1 255 8.7E-36 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AMIS_65400 f8b813cb6e4322eaed3c6ea3cbaca8ab 257 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 245 5.0E-10 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase AMIS_65400 f8b813cb6e4322eaed3c6ea3cbaca8ab 257 SUPERFAMILY SSF56219 2 254 1.7E-30 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AMIS_22450 feefde175b23ea24407ef643301c17cc 384 Pfam PF13556 PucR C-terminal helix-turn-helix domain 319 375 1.3E-19 T 14-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain AMIS_22450 feefde175b23ea24407ef643301c17cc 384 Gene3D G3DSA:1.10.10.2840 252 381 8.0E-22 T 14-10-2018 AMIS_5310 a47aa5f3475a64f0d89b607d670d8cf2 178 Pfam PF00583 Acetyltransferase (GNAT) family 27 132 9.0E-13 T 14-10-2018 IPR000182 GNAT domain AMIS_5310 a47aa5f3475a64f0d89b607d670d8cf2 178 SUPERFAMILY SSF55729 25 140 6.0E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_5310 a47aa5f3475a64f0d89b607d670d8cf2 178 Gene3D G3DSA:3.40.630.30 12 143 1.1E-36 T 14-10-2018 AMIS_39840 be8f1f85fe31af4d6f8c762e4e0ea95b 291 SUPERFAMILY SSF55486 152 284 7.07E-7 T 14-10-2018 AMIS_26980 74c83390945b86dc3f971c04d8d8e045 329 Gene3D G3DSA:3.40.50.1820 61 324 9.9E-44 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_26980 74c83390945b86dc3f971c04d8d8e045 329 Pfam PF00756 Putative esterase 93 237 4.0E-16 T 14-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 AMIS_26980 74c83390945b86dc3f971c04d8d8e045 329 SUPERFAMILY SSF53474 74 323 9.8E-30 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_25190 c062d1fcd6186fae479210c53c3cf799 428 SUPERFAMILY SSF51905 11 399 1.14E-35 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_25190 c062d1fcd6186fae479210c53c3cf799 428 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 303 319 1.1E-5 T 14-10-2018 AMIS_25190 c062d1fcd6186fae479210c53c3cf799 428 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 16 35 1.1E-5 T 14-10-2018 AMIS_25190 c062d1fcd6186fae479210c53c3cf799 428 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 204 222 1.1E-5 T 14-10-2018 AMIS_25190 c062d1fcd6186fae479210c53c3cf799 428 Gene3D G3DSA:3.50.50.60 10 406 1.7E-37 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_25190 c062d1fcd6186fae479210c53c3cf799 428 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 16 324 2.3E-12 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMIS_32060 b4a30714c7d69d72c7bd9749e5ec0004 188 Pfam PF00440 Bacterial regulatory proteins, tetR family 1 45 6.4E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_32060 b4a30714c7d69d72c7bd9749e5ec0004 188 SUPERFAMILY SSF48498 84 173 2.18E-7 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_32060 b4a30714c7d69d72c7bd9749e5ec0004 188 SUPERFAMILY SSF46689 1 68 1.13E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_32060 b4a30714c7d69d72c7bd9749e5ec0004 188 Gene3D G3DSA:1.10.357.10 1 179 2.7E-30 T 14-10-2018 AMIS_5710 a10aba9f1f436090b58853fefdbbe57f 416 Pfam PF07690 Major Facilitator Superfamily 20 275 3.9E-12 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_5710 a10aba9f1f436090b58853fefdbbe57f 416 SUPERFAMILY SSF103473 18 393 3.27E-27 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_5710 a10aba9f1f436090b58853fefdbbe57f 416 Gene3D G3DSA:1.20.1250.20 17 394 4.6E-23 T 14-10-2018 AMIS_15140 e2b9430dda38acc6a863bdee7156263e 241 SUPERFAMILY SSF54001 121 232 2.03E-29 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily AMIS_15140 e2b9430dda38acc6a863bdee7156263e 241 Pfam PF00877 NlpC/P60 family 139 236 2.5E-20 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain AMIS_15140 e2b9430dda38acc6a863bdee7156263e 241 Gene3D G3DSA:3.90.1720.10 77 240 2.2E-33 T 14-10-2018 AMIS_9560 6caa94db563c6c533fe1e01689d718ac 101 SUPERFAMILY SSF54909 1 76 1.88E-7 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel AMIS_14780 1237bc115f8120f4706fc5f5f79d57ea 307 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 26 298 6.7E-96 T 14-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 AMIS_14780 1237bc115f8120f4706fc5f5f79d57ea 307 Pfam PF02219 Methylenetetrahydrofolate reductase 18 298 1.4E-99 T 14-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 AMIS_14780 1237bc115f8120f4706fc5f5f79d57ea 307 Gene3D G3DSA:3.20.20.220 17 306 3.8E-99 T 14-10-2018 AMIS_14780 1237bc115f8120f4706fc5f5f79d57ea 307 SUPERFAMILY SSF51730 18 298 1.94E-90 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like AMIS_50730 0ea037c649e02e80a38d88e19fccfcb3 283 Pfam PF07859 alpha/beta hydrolase fold 24 212 3.8E-15 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 AMIS_50730 0ea037c649e02e80a38d88e19fccfcb3 283 Gene3D G3DSA:3.40.50.1820 2 252 3.5E-52 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_50730 0ea037c649e02e80a38d88e19fccfcb3 283 SUPERFAMILY SSF53474 8 244 2.16E-34 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_45520 72d1c7eb01c4d14496d3dc13fe03729c 135 SUPERFAMILY SSF54909 17 126 1.18E-22 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel AMIS_45520 72d1c7eb01c4d14496d3dc13fe03729c 135 Pfam PF03795 YCII-related domain 17 106 1.6E-10 T 14-10-2018 IPR005545 YCII-related AMIS_45520 72d1c7eb01c4d14496d3dc13fe03729c 135 Gene3D G3DSA:3.30.70.1060 1 129 3.3E-25 T 14-10-2018 AMIS_53530 bd9e0d37e22ba078847b4b9e4bd150a5 325 SUPERFAMILY SSF160240 230 304 7.59E-7 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 AMIS_53530 bd9e0d37e22ba078847b4b9e4bd150a5 325 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 16 306 3.0E-47 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AMIS_53530 bd9e0d37e22ba078847b4b9e4bd150a5 325 Gene3D G3DSA:1.20.1510.10 14 226 2.4E-32 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AMIS_53530 bd9e0d37e22ba078847b4b9e4bd150a5 325 SUPERFAMILY SSF161111 15 227 8.63E-37 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AMIS_53530 bd9e0d37e22ba078847b4b9e4bd150a5 325 Pfam PF01545 Cation efflux family 17 226 9.3E-35 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AMIS_4080 7bd06481be1869d3f1c1785da9941f53 186 SUPERFAMILY SSF49265 89 166 7.22E-5 T 14-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 AMIS_38910 43530f33c447402f0d700316abc71c2f 200 Pfam PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain 21 126 9.2E-6 T 14-10-2018 IPR024344 Mycothiol-dependent maleylpyruvate isomerase, metal-binding domain GO:0046872 AMIS_38910 43530f33c447402f0d700316abc71c2f 200 TIGRFAM TIGR03086 TIGR03086: TIGR03086 family protein 26 182 5.9E-28 T 14-10-2018 IPR017520 Conserved hypothetical protein CHP03086 AMIS_38910 43530f33c447402f0d700316abc71c2f 200 SUPERFAMILY SSF109854 9 133 1.59E-11 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes AMIS_38910 43530f33c447402f0d700316abc71c2f 200 TIGRFAM TIGR03083 TIGR03083: uncharacterized Actinobacterial protein TIGR03083 25 144 4.8E-15 T 14-10-2018 IPR017517 Conserved hypothetical protein CHP03083, actinobacterial-type AMIS_78970 9dd368f2117df4fcc22c6a56ee44c27e 407 SUPERFAMILY SSF103473 8 393 1.7E-31 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_78970 9dd368f2117df4fcc22c6a56ee44c27e 407 Pfam PF05977 Transmembrane secretion effector 2 381 4.7E-30 T 14-10-2018 IPR010290 Transmembrane secretion effector AMIS_78970 9dd368f2117df4fcc22c6a56ee44c27e 407 Gene3D G3DSA:1.20.1250.20 3 381 4.8E-29 T 14-10-2018 AMIS_42510 e8eb9454d99e3dc3b045bd7492e20176 194 Pfam PF13649 Methyltransferase domain 41 129 4.5E-15 T 14-10-2018 AMIS_42510 e8eb9454d99e3dc3b045bd7492e20176 194 SUPERFAMILY SSF53335 2 173 8.2E-31 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_42510 e8eb9454d99e3dc3b045bd7492e20176 194 Gene3D G3DSA:3.40.50.150 1 186 6.7E-48 T 14-10-2018 AMIS_63970 79465d68d31d255ca23ff17f6e82f318 222 Pfam PF12787 EcsC protein family 62 221 2.0E-14 T 14-10-2018 IPR024787 EcsC protein AMIS_61250 18cb20fc2d76fccdfc4e6536c64bb383 291 Pfam PF13560 Helix-turn-helix domain 13 72 2.1E-13 T 14-10-2018 AMIS_61250 18cb20fc2d76fccdfc4e6536c64bb383 291 Gene3D G3DSA:1.10.260.40 8 85 2.1E-8 T 14-10-2018 AMIS_61250 18cb20fc2d76fccdfc4e6536c64bb383 291 SUPERFAMILY SSF47413 10 64 4.74E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_61250 18cb20fc2d76fccdfc4e6536c64bb383 291 SMART SM00530 16 71 1.6E-4 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMIS_43590 da028c90419bea044ea22252ce0d30b3 199 SUPERFAMILY SSF46689 10 90 1.32E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_43590 da028c90419bea044ea22252ce0d30b3 199 Gene3D G3DSA:1.10.357.10 60 199 1.6E-33 T 14-10-2018 AMIS_43590 da028c90419bea044ea22252ce0d30b3 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 65 5.3E-15 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_43590 da028c90419bea044ea22252ce0d30b3 199 Gene3D G3DSA:1.10.10.60 10 58 1.1E-17 T 14-10-2018 AMIS_43590 da028c90419bea044ea22252ce0d30b3 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 3.6E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_43590 da028c90419bea044ea22252ce0d30b3 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 3.6E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_5570 fd57ee94436269401ea107755dfefa18 176 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 12 148 1.0E-66 T 14-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_5570 fd57ee94436269401ea107755dfefa18 176 Gene3D G3DSA:3.40.50.12280 2 164 1.0E-69 T 14-10-2018 AMIS_5570 fd57ee94436269401ea107755dfefa18 176 SUPERFAMILY SSF56770 5 149 5.49E-61 T 14-10-2018 AMIS_5570 fd57ee94436269401ea107755dfefa18 176 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 33 141 2.6E-23 T 14-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_5570 fd57ee94436269401ea107755dfefa18 176 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 1 147 40.285 T 14-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMIS_59020 b0ba26521c0d0f6ccbd7fe6a9edbf9cb 173 Pfam PF04892 VanZ like family 43 163 7.5E-19 T 14-10-2018 IPR006976 VanZ-like AMIS_15960 99728f2f44925eec80bdf5e8fed72d24 130 Gene3D G3DSA:3.30.450.30 12 129 2.8E-20 T 14-10-2018 AMIS_15960 99728f2f44925eec80bdf5e8fed72d24 130 Pfam PF03259 Roadblock/LC7 domain 18 100 3.6E-12 T 14-10-2018 IPR004942 Roadblock/LAMTOR2 domain AMIS_15960 99728f2f44925eec80bdf5e8fed72d24 130 SUPERFAMILY SSF103196 4 126 8.72E-21 T 14-10-2018 AMIS_15960 99728f2f44925eec80bdf5e8fed72d24 130 SMART SM00960 12 101 1.1E-10 T 14-10-2018 IPR004942 Roadblock/LAMTOR2 domain AMIS_49160 e1388bad462d47964d45589857f18bd0 614 SUPERFAMILY SSF48208 75 363 2.0E-26 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AMIS_49160 e1388bad462d47964d45589857f18bd0 614 Pfam PF07944 Beta-L-arabinofuranosidase, GH127 19 529 5.0E-121 T 14-10-2018 IPR012878 Beta-L-arabinofuranosidase, GH127 AMIS_74280 8aec7bd89531577490e1e090af348579 189 Pfam PF14030 Protein of unknown function (DUF4245) 29 188 6.6E-36 T 14-10-2018 IPR025339 Protein of unknown function DUF4245 AMIS_75210 cec3edeac5aee799b47d1a2b1f8959d7 186 Gene3D G3DSA:1.10.3210.10 2 184 2.2E-44 T 14-10-2018 AMIS_75210 cec3edeac5aee799b47d1a2b1f8959d7 186 Pfam PF13023 HD domain 16 169 1.1E-25 T 14-10-2018 IPR006674 HD domain AMIS_75210 cec3edeac5aee799b47d1a2b1f8959d7 186 SUPERFAMILY SSF109604 9 160 8.79E-33 T 14-10-2018 AMIS_75210 cec3edeac5aee799b47d1a2b1f8959d7 186 SMART SM00471 33 147 6.0E-8 T 14-10-2018 IPR003607 HD/PDEase domain AMIS_32650 4dd5891d5de43b5e3eaf1a5552ebd813 218 Gene3D G3DSA:2.70.50.50 36 218 4.5E-57 T 14-10-2018 AMIS_32650 4dd5891d5de43b5e3eaf1a5552ebd813 218 SUPERFAMILY SSF81296 36 217 8.4E-28 T 14-10-2018 IPR014756 Immunoglobulin E-set AMIS_32650 4dd5891d5de43b5e3eaf1a5552ebd813 218 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 36 215 1.6E-28 T 14-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal AMIS_66540 efcd69fbe9a6e1b3811f28df068c73e5 503 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 73 231 5.9E-22 T 14-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like AMIS_77180 2c87ed5d09a4fd6c818a9771801fb6fc 308 Gene3D G3DSA:3.40.50.10490 164 296 9.2E-20 T 14-10-2018 AMIS_77180 2c87ed5d09a4fd6c818a9771801fb6fc 308 Gene3D G3DSA:3.40.50.10490 4 152 3.7E-23 T 14-10-2018 AMIS_77180 2c87ed5d09a4fd6c818a9771801fb6fc 308 SUPERFAMILY SSF53697 8 305 1.7E-38 T 14-10-2018 AMIS_23590 fb4ba0ade637123a19bca6904fa34603 770 SUPERFAMILY SSF102114 13 344 9.03E-24 T 14-10-2018 AMIS_23590 fb4ba0ade637123a19bca6904fa34603 770 Pfam PF04055 Radical SAM superfamily 24 169 7.6E-11 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMIS_23590 fb4ba0ade637123a19bca6904fa34603 770 Pfam PF13394 4Fe-4S single cluster domain 24 117 2.0E-5 T 14-10-2018 AMIS_23590 fb4ba0ade637123a19bca6904fa34603 770 TIGRFAM TIGR04267 mod_HExxH: HEXXH motif domain 396 763 3.6E-89 T 14-10-2018 IPR026337 HEXXH motif domain AMIS_23590 fb4ba0ade637123a19bca6904fa34603 770 TIGRFAM TIGR04269 SAM_SPASM_FxsB: radical SAM/SPASM domain protein, FxsB family 15 373 3.1E-158 T 14-10-2018 IPR026335 Radical SAM/SPASM domain, FxsB family AMIS_23590 fb4ba0ade637123a19bca6904fa34603 770 Gene3D G3DSA:3.20.20.70 13 383 3.7E-65 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_16700 6c2adbd447ad76bb2d7787548483c5e4 255 SUPERFAMILY SSF51735 7 253 5.95E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_16700 6c2adbd447ad76bb2d7787548483c5e4 255 PIRSF PIRSF000094 2 255 1.0E-84 T 14-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AMIS_16700 6c2adbd447ad76bb2d7787548483c5e4 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 251 5.6E-68 T 14-10-2018 AMIS_16700 6c2adbd447ad76bb2d7787548483c5e4 255 Gene3D G3DSA:3.40.50.720 2 253 4.4E-49 T 14-10-2018 AMIS_48040 ea8edba89eb4542c669b2b947ddeda3e 305 Pfam PF00248 Aldo/keto reductase family 3 304 4.9E-44 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain AMIS_48040 ea8edba89eb4542c669b2b947ddeda3e 305 Gene3D G3DSA:3.20.20.100 1 305 8.5E-64 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMIS_48040 ea8edba89eb4542c669b2b947ddeda3e 305 SUPERFAMILY SSF51430 3 304 3.67E-57 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMIS_47800 8ae481a13da1132121eb815a540695e9 491 Gene3D G3DSA:3.30.70.270 317 483 5.9E-46 T 14-10-2018 AMIS_47800 8ae481a13da1132121eb815a540695e9 491 Pfam PF00990 Diguanylate cyclase, GGDEF domain 322 475 5.3E-38 T 14-10-2018 IPR000160 GGDEF domain AMIS_47800 8ae481a13da1132121eb815a540695e9 491 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 320 475 4.8E-36 T 14-10-2018 IPR000160 GGDEF domain AMIS_47800 8ae481a13da1132121eb815a540695e9 491 SMART SM00267 311 483 6.8E-45 T 14-10-2018 IPR000160 GGDEF domain AMIS_47800 8ae481a13da1132121eb815a540695e9 491 SUPERFAMILY SSF55073 327 476 7.69E-40 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_30080 31049ef53648cc2ee0ddc368218b9018 71 Gene3D G3DSA:3.40.50.12740 1 70 1.4E-9 T 14-10-2018 AMIS_30080 31049ef53648cc2ee0ddc368218b9018 71 SUPERFAMILY SSF52172 2 67 1.35E-9 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_55520 62b85c336961fb7f9ff4e9c54d96b9b8 363 Gene3D G3DSA:3.20.20.80 16 362 1.1E-113 T 14-10-2018 AMIS_55520 62b85c336961fb7f9ff4e9c54d96b9b8 363 Pfam PF07745 Glycosyl hydrolase family 53 30 360 6.0E-100 T 14-10-2018 IPR011683 Glycosyl hydrolase family 53 GO:0015926 AMIS_55520 62b85c336961fb7f9ff4e9c54d96b9b8 363 SUPERFAMILY SSF51445 9 361 1.74E-78 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_39110 b1be91c9ceb9b5fb2c849852468d303a 205 Pfam PF00265 Thymidine kinase 24 201 8.2E-19 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 AMIS_39110 b1be91c9ceb9b5fb2c849852468d303a 205 Gene3D G3DSA:3.30.60.20 153 205 1.8E-7 T 14-10-2018 AMIS_39110 b1be91c9ceb9b5fb2c849852468d303a 205 PIRSF PIRSF035805 21 205 3.1E-28 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 AMIS_39110 b1be91c9ceb9b5fb2c849852468d303a 205 SUPERFAMILY SSF52540 25 146 9.38E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_39110 b1be91c9ceb9b5fb2c849852468d303a 205 Gene3D G3DSA:3.40.50.300 22 150 3.4E-18 T 14-10-2018 AMIS_10710 03932ba858739617c3ee10be2cd5651e 211 Gene3D G3DSA:2.40.50.140 2 117 1.0E-35 T 14-10-2018 AMIS_10710 03932ba858739617c3ee10be2cd5651e 211 SUPERFAMILY SSF50249 5 122 2.69E-29 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMIS_10710 03932ba858739617c3ee10be2cd5651e 211 Pfam PF00436 Single-strand binding protein family 5 103 2.3E-19 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 AMIS_79850 a37b933791c3087c0e6723472ca6c665 74 Gene3D G3DSA:3.40.190.80 1 32 4.3E-6 T 14-10-2018 AMIS_79850 a37b933791c3087c0e6723472ca6c665 74 SUPERFAMILY SSF56655 2 32 2.82E-5 T 14-10-2018 AMIS_78240 c86ce33d2756c622f90929f1747083fb 163 Pfam PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease 18 162 8.8E-30 T 14-10-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AMIS_78240 c86ce33d2756c622f90929f1747083fb 163 SUPERFAMILY SSF55298 14 162 1.57E-54 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AMIS_78240 c86ce33d2756c622f90929f1747083fb 163 Gene3D G3DSA:3.30.1330.40 10 163 2.2E-59 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AMIS_41870 42562ba8f6177a5a5bc8a82db88a0096 523 Gene3D G3DSA:1.10.510.40 323 521 7.8E-25 T 14-10-2018 AMIS_41870 42562ba8f6177a5a5bc8a82db88a0096 523 Pfam PF06276 Ferric iron reductase FhuF-like transporter 357 510 4.9E-27 T 14-10-2018 IPR022770 Ferric iron reductase FhuF domain AMIS_41870 42562ba8f6177a5a5bc8a82db88a0096 523 Pfam PF04183 IucA / IucC family 125 332 4.2E-32 T 14-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 AMIS_49970 686b0ab79e7af2d8713643434f3605f1 159 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 81 91 - T 14-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 AMIS_49970 686b0ab79e7af2d8713643434f3605f1 159 SUPERFAMILY SSF52799 3 158 4.67E-29 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like AMIS_49970 686b0ab79e7af2d8713643434f3605f1 159 Pfam PF13350 Tyrosine phosphatase family 2 118 5.8E-24 T 14-10-2018 IPR026893 Tyrosine/serine-protein phosphatase IphP-type AMIS_49970 686b0ab79e7af2d8713643434f3605f1 159 Gene3D G3DSA:3.90.190.10 1 119 5.7E-24 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like AMIS_49660 d237dd4bc0682d897d34db5c841853dc 599 Pfam PF00005 ABC transporter 32 175 3.0E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_49660 d237dd4bc0682d897d34db5c841853dc 599 SMART SM00382 40 232 1.8E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_49660 d237dd4bc0682d897d34db5c841853dc 599 SUPERFAMILY SSF52540 8 237 5.33E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_49660 d237dd4bc0682d897d34db5c841853dc 599 Gene3D G3DSA:3.40.50.300 1 246 8.3E-60 T 14-10-2018 AMIS_49660 d237dd4bc0682d897d34db5c841853dc 599 Pfam PF01061 ABC-2 type transporter 360 563 1.1E-13 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 AMIS_61550 b1bf6e8a5e9535208f813a70542fed3c 384 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 212 249 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMIS_61550 b1bf6e8a5e9535208f813a70542fed3c 384 Gene3D G3DSA:3.90.1150.10 23 376 6.9E-139 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMIS_61550 b1bf6e8a5e9535208f813a70542fed3c 384 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 11 384 66.55 T 14-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 AMIS_61550 b1bf6e8a5e9535208f813a70542fed3c 384 Pfam PF00202 Aminotransferase class-III 21 380 3.3E-107 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMIS_61550 b1bf6e8a5e9535208f813a70542fed3c 384 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 12 382 5.2E-138 T 14-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 AMIS_61550 b1bf6e8a5e9535208f813a70542fed3c 384 PIRSF PIRSF000521 162 383 1.8E-31 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMIS_61550 b1bf6e8a5e9535208f813a70542fed3c 384 PIRSF PIRSF000521 116 154 0.38 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMIS_61550 b1bf6e8a5e9535208f813a70542fed3c 384 PIRSF PIRSF000521 4 122 2.2E-5 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMIS_61550 b1bf6e8a5e9535208f813a70542fed3c 384 Gene3D G3DSA:3.40.640.10 55 294 6.9E-139 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_61550 b1bf6e8a5e9535208f813a70542fed3c 384 SUPERFAMILY SSF53383 10 382 2.79E-124 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_32180 eb640e943772e463533c2e0e6b9126c7 339 Gene3D G3DSA:3.30.420.40 114 276 9.6E-44 T 14-10-2018 AMIS_32180 eb640e943772e463533c2e0e6b9126c7 339 SUPERFAMILY SSF53067 117 279 9.71E-30 T 14-10-2018 AMIS_32180 eb640e943772e463533c2e0e6b9126c7 339 SUPERFAMILY SSF53383 261 330 7.07E-5 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_32180 eb640e943772e463533c2e0e6b9126c7 339 Gene3D G3DSA:3.30.420.40 8 113 9.6E-44 T 14-10-2018 AMIS_32180 eb640e943772e463533c2e0e6b9126c7 339 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 10 263 6.7E-14 T 14-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 AMIS_36490 71b4c6380245899ec0491b57b8c72344 255 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 71 236 5.5E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_36490 71b4c6380245899ec0491b57b8c72344 255 SUPERFAMILY SSF161098 54 231 5.1E-30 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_36490 71b4c6380245899ec0491b57b8c72344 255 Gene3D G3DSA:1.10.3720.10 43 240 5.9E-24 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_44400 15bdb13b3f85ac52398eef4b41c88d50 374 Pfam PF13473 Cupredoxin-like domain 14 110 1.3E-10 T 14-10-2018 IPR028096 EfeO-type cupredoxin-like domain AMIS_44400 15bdb13b3f85ac52398eef4b41c88d50 374 Gene3D G3DSA:1.20.1420.20 129 373 5.8E-93 T 14-10-2018 IPR038352 Imelysin-like domain superfamily AMIS_44400 15bdb13b3f85ac52398eef4b41c88d50 374 Pfam PF09375 Imelysin 137 366 6.9E-42 T 14-10-2018 IPR018976 Imelysin-like domain AMIS_12380 d0590e185d528d71b7176e3505a83218 421 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 9.7E-5 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMIS_12380 d0590e185d528d71b7176e3505a83218 421 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 110 118 9.7E-5 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMIS_12380 d0590e185d528d71b7176e3505a83218 421 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 318 337 9.7E-5 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMIS_12380 d0590e185d528d71b7176e3505a83218 421 Pfam PF01593 Flavin containing amine oxidoreductase 16 412 7.7E-32 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 AMIS_12380 d0590e185d528d71b7176e3505a83218 421 Gene3D G3DSA:3.50.50.60 1 261 4.3E-30 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_12380 d0590e185d528d71b7176e3505a83218 421 SUPERFAMILY SSF51905 6 415 4.21E-45 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_41240 e340c879678ba65ed5cd7ca10c7d6d63 235 Gene3D G3DSA:1.10.1780.10 85 231 7.5E-35 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AMIS_41240 e340c879678ba65ed5cd7ca10c7d6d63 235 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 104 149 5.1E-13 T 14-10-2018 IPR004176 Clp, N-terminal AMIS_41240 e340c879678ba65ed5cd7ca10c7d6d63 235 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 176 221 8.7E-5 T 14-10-2018 IPR004176 Clp, N-terminal AMIS_41240 e340c879678ba65ed5cd7ca10c7d6d63 235 SUPERFAMILY SSF81923 88 219 1.86E-22 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AMIS_2390 b615c255327ef1bd295ee313d23f746e 374 Pfam PF16466 Domain of unknown function (DUF5047) 44 177 2.8E-75 T 14-10-2018 IPR032490 Domain of unknown function DUF5047 AMIS_31040 820133e708e9876b0b41c59f303c48ce 141 SUPERFAMILY SSF49764 5 129 2.56E-28 T 14-10-2018 IPR008978 HSP20-like chaperone AMIS_31040 820133e708e9876b0b41c59f303c48ce 141 Gene3D G3DSA:2.60.40.790 2 130 9.8E-27 T 14-10-2018 IPR008978 HSP20-like chaperone AMIS_31040 820133e708e9876b0b41c59f303c48ce 141 Pfam PF00011 Hsp20/alpha crystallin family 33 129 3.9E-19 T 14-10-2018 IPR002068 Alpha crystallin/Hsp20 domain AMIS_47530 c2816260a3166371fb3aacecd0ed7c56 172 Pfam PF04186 FxsA cytoplasmic membrane protein 12 118 9.8E-28 T 14-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 AMIS_11910 a94287a73e05cb8857bcc77bf8e52a42 224 SUPERFAMILY SSF56784 1 214 8.27E-31 T 14-10-2018 IPR036412 HAD-like superfamily AMIS_11910 a94287a73e05cb8857bcc77bf8e52a42 224 Gene3D G3DSA:1.10.150.240 18 80 3.4E-49 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AMIS_11910 a94287a73e05cb8857bcc77bf8e52a42 224 Gene3D G3DSA:3.40.50.1000 4 208 3.4E-49 T 14-10-2018 IPR023214 HAD superfamily AMIS_11910 a94287a73e05cb8857bcc77bf8e52a42 224 Pfam PF12710 haloacid dehalogenase-like hydrolase 5 180 1.1E-12 T 14-10-2018 AMIS_8070 d7821b40133dca8e721988e75d16d3f2 48 Gene3D G3DSA:3.40.30.10 1 46 6.2E-12 T 14-10-2018 AMIS_8070 d7821b40133dca8e721988e75d16d3f2 48 Pfam PF03190 Protein of unknown function, DUF255 1 40 2.6E-15 T 14-10-2018 IPR004879 Domain of unknown function DUF255 AMIS_8070 d7821b40133dca8e721988e75d16d3f2 48 SUPERFAMILY SSF52833 2 43 8.39E-5 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMIS_38820 2f636cac17b74898e13bbae533c3bb23 369 SUPERFAMILY SSF53383 4 354 2.97E-75 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_38820 2f636cac17b74898e13bbae533c3bb23 369 Gene3D G3DSA:3.40.640.10 55 278 1.9E-100 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_38820 2f636cac17b74898e13bbae533c3bb23 369 Pfam PF00155 Aminotransferase class I and II 24 363 2.0E-48 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMIS_38820 2f636cac17b74898e13bbae533c3bb23 369 Gene3D G3DSA:3.90.1150.10 4 363 1.9E-100 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMIS_38820 2f636cac17b74898e13bbae533c3bb23 369 PRINTS PR00799 Aspartate aminotransferase signature 157 176 1.6E-22 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AMIS_38820 2f636cac17b74898e13bbae533c3bb23 369 PRINTS PR00799 Aspartate aminotransferase signature 188 200 1.6E-22 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AMIS_38820 2f636cac17b74898e13bbae533c3bb23 369 PRINTS PR00799 Aspartate aminotransferase signature 312 330 1.6E-22 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AMIS_38820 2f636cac17b74898e13bbae533c3bb23 369 PRINTS PR00799 Aspartate aminotransferase signature 251 276 1.6E-22 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AMIS_38700 17c6531f122ffe74eb3e08f30536cb8d 434 Gene3D G3DSA:2.130.10.10 98 380 3.2E-12 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_38700 17c6531f122ffe74eb3e08f30536cb8d 434 SUPERFAMILY SSF50969 100 291 4.71E-15 T 14-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like AMIS_30050 0108823fc30e03b31de37917c2c9315a 205 SUPERFAMILY SSF52091 110 179 1.53E-13 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_30050 0108823fc30e03b31de37917c2c9315a 205 Gene3D G3DSA:3.30.750.24 78 179 1.2E-15 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_30050 0108823fc30e03b31de37917c2c9315a 205 Pfam PF13466 STAS domain 99 162 3.4E-10 T 14-10-2018 IPR002645 STAS domain AMIS_15700 41b3655f8e944a7d17e611380831731a 290 Pfam PF08445 FR47-like protein 218 277 2.5E-8 T 14-10-2018 IPR013653 FR47-like GO:0016747 AMIS_15700 41b3655f8e944a7d17e611380831731a 290 SUPERFAMILY SSF55729 177 281 1.74E-17 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_49110 61341084cdf594ca8a71ad6513c9fd2a 340 SUPERFAMILY SSF53474 27 336 1.51E-30 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_49110 61341084cdf594ca8a71ad6513c9fd2a 340 Pfam PF00756 Putative esterase 30 287 2.0E-17 T 14-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 AMIS_75760 02735aed2f33c83db0bdc4221a55d4ea 73 Pfam PF09723 Zinc ribbon domain 1 40 9.1E-13 T 14-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain AMIS_75760 02735aed2f33c83db0bdc4221a55d4ea 73 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 49 7.7E-15 T 14-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain AMIS_75760 02735aed2f33c83db0bdc4221a55d4ea 73 SMART SM00834 1 42 2.1E-13 T 14-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain AMIS_74750 9dc04007446f4acce5a0360f1ac540e4 126 Pfam PF05331 Protein of unknown function (DUF742) 8 126 1.0E-27 T 14-10-2018 IPR007995 Protein of unknown function DUF742 AMIS_58110 4bd43bd9e34b0fc2a1d9f32ed91d3b33 531 Gene3D G3DSA:3.40.50.300 179 430 5.9E-53 T 14-10-2018 AMIS_58110 4bd43bd9e34b0fc2a1d9f32ed91d3b33 531 Pfam PF06564 Cellulose biosynthesis protein BcsQ 253 390 1.4E-4 T 14-10-2018 IPR017746 Cellulose synthase operon protein BcsQ AMIS_58110 4bd43bd9e34b0fc2a1d9f32ed91d3b33 531 SUPERFAMILY SSF52540 248 463 7.31E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_40430 9f90845009a7c328356eaff87fc2de34 274 SUPERFAMILY SSF53474 137 239 1.24E-7 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_44170 ff1d055ad3049dc2561f0d3d77d6d560 569 SUPERFAMILY SSF75005 13 337 3.71E-65 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMIS_44170 ff1d055ad3049dc2561f0d3d77d6d560 569 Gene3D G3DSA:2.115.10.20 32 338 3.4E-75 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMIS_44170 ff1d055ad3049dc2561f0d3d77d6d560 569 Pfam PF04616 Glycosyl hydrolases family 43 26 336 2.1E-50 T 14-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 AMIS_44170 ff1d055ad3049dc2561f0d3d77d6d560 569 Gene3D G3DSA:2.60.120.200 371 568 6.7E-17 T 14-10-2018 AMIS_44170 ff1d055ad3049dc2561f0d3d77d6d560 569 SUPERFAMILY SSF49899 372 566 5.54E-10 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily AMIS_55610 56279c1c5b4ab0ab20c64b74665fac91 639 Pfam PF13086 AAA domain 214 593 1.9E-17 T 14-10-2018 AMIS_55610 56279c1c5b4ab0ab20c64b74665fac91 639 SUPERFAMILY SSF52540 213 604 6.54E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_6940 2147e7858c9e4205ff861ab24c368eb2 368 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 88 272 4.8E-28 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain AMIS_6940 2147e7858c9e4205ff861ab24c368eb2 368 Gene3D G3DSA:1.10.260.150 55 334 4.9E-52 T 14-10-2018 AMIS_6940 2147e7858c9e4205ff861ab24c368eb2 368 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 88 272 3.4E-19 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain AMIS_56000 33973d7701b1362041bd259e56e2468c 456 SUPERFAMILY SSF53383 11 455 8.53E-104 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_56000 33973d7701b1362041bd259e56e2468c 456 Gene3D G3DSA:3.90.1150.170 36 447 9.4E-114 T 14-10-2018 AMIS_56000 33973d7701b1362041bd259e56e2468c 456 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 67 399 1.8E-39 T 14-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 AMIS_56000 33973d7701b1362041bd259e56e2468c 456 Gene3D G3DSA:3.40.640.10 101 344 9.4E-114 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_7540 b9cc2caa982240977cab1a510355ed78 538 Pfam PF05960 Bacterial protein of unknown function (DUF885) 20 535 1.9E-99 T 14-10-2018 IPR010281 Protein of unknown function DUF885 AMIS_53010 7ca1a31ccf2f0af331049c582f1d37d8 133 SMART SM00900 45 131 9.0E-12 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 AMIS_53010 7ca1a31ccf2f0af331049c582f1d37d8 133 Pfam PF04205 FMN-binding domain 56 128 1.0E-9 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 AMIS_53010 7ca1a31ccf2f0af331049c582f1d37d8 133 Gene3D G3DSA:3.90.1010.20 45 133 9.4E-6 T 14-10-2018 AMIS_66300 3d10d1beac2db6c7b31bb25f190f8867 294 Pfam PF00296 Luciferase-like monooxygenase 14 261 1.0E-53 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMIS_66300 3d10d1beac2db6c7b31bb25f190f8867 294 TIGRFAM TIGR03619 F420_Rv2161c: probable F420-dependent oxidoreductase, Rv2161c family 21 261 6.1E-61 T 14-10-2018 IPR019921 Luciferase-like, F420-dependent oxidoreductase, Rv2161c, predicted AMIS_66300 3d10d1beac2db6c7b31bb25f190f8867 294 Gene3D G3DSA:3.20.20.30 3 293 1.8E-65 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_66300 3d10d1beac2db6c7b31bb25f190f8867 294 SUPERFAMILY SSF51679 11 266 5.1E-63 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_62200 3776c7b130c9b5ff5c62b33c70f1bcf2 144 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 10 143 22.296 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 AMIS_62200 3776c7b130c9b5ff5c62b33c70f1bcf2 144 Gene3D G3DSA:1.10.940.10 10 144 3.7E-41 T 14-10-2018 IPR035926 NusB-like superfamily AMIS_62200 3776c7b130c9b5ff5c62b33c70f1bcf2 144 Pfam PF01029 NusB family 13 139 1.4E-33 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AMIS_62200 3776c7b130c9b5ff5c62b33c70f1bcf2 144 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 12 139 2.1E-39 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 AMIS_62200 3776c7b130c9b5ff5c62b33c70f1bcf2 144 SUPERFAMILY SSF48013 12 138 3.14E-37 T 14-10-2018 IPR035926 NusB-like superfamily AMIS_19530 d2260aa0a9e91b73f1aca6f077b57f3c 232 Pfam PF10127 Predicted nucleotidyltransferase 4 163 2.8E-26 T 14-10-2018 IPR018775 Nucleotidyltransferase, predicted AMIS_31790 5c1a9d4ff400a07a991abcd27c6aa9e3 231 ProDom PD068376 ORF2 SECRETED GLNII PRECURSOR SIGNAL 40 231 1.0E-28 T 14-10-2018 AMIS_31790 5c1a9d4ff400a07a991abcd27c6aa9e3 231 Gene3D G3DSA:2.40.40.10 150 227 3.9E-6 T 14-10-2018 IPR036908 RlpA-like domain superfamily AMIS_51180 317847cf14f7428f8fddaa5b0d012fdd 438 Pfam PF02720 Domain of unknown function (DUF222) 53 354 1.5E-48 T 14-10-2018 IPR003870 Domain of unknown function DUF222 AMIS_51180 317847cf14f7428f8fddaa5b0d012fdd 438 SMART SM00507 345 397 4.4E-9 T 14-10-2018 IPR003615 HNH nuclease AMIS_76900 fd40db2d0e6910ce742c42bf7f7f2c5c 356 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 58 348 5.0E-88 T 14-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 AMIS_76900 fd40db2d0e6910ce742c42bf7f7f2c5c 356 Gene3D G3DSA:1.10.3720.10 111 350 1.6E-31 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_76900 fd40db2d0e6910ce742c42bf7f7f2c5c 356 SUPERFAMILY SSF161098 74 340 3.4E-29 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_76900 fd40db2d0e6910ce742c42bf7f7f2c5c 356 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 135 344 5.2E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_41250 616940727bd4d78edfa9a373b2b03fbe 344 Gene3D G3DSA:3.40.50.1110 25 226 1.4E-57 T 14-10-2018 IPR036514 SGNH hydrolase superfamily AMIS_41250 616940727bd4d78edfa9a373b2b03fbe 344 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 34 207 6.1E-21 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain AMIS_41250 616940727bd4d78edfa9a373b2b03fbe 344 SUPERFAMILY SSF52266 26 216 2.68E-30 T 14-10-2018 AMIS_6800 335db96b1b20e7e226812392d52c74cc 369 Gene3D G3DSA:3.40.50.2300 44 330 2.2E-96 T 14-10-2018 AMIS_6800 335db96b1b20e7e226812392d52c74cc 369 Pfam PF13407 Periplasmic binding protein domain 47 307 3.7E-54 T 14-10-2018 IPR025997 Periplasmic binding protein AMIS_6800 335db96b1b20e7e226812392d52c74cc 369 Gene3D G3DSA:3.40.50.2300 147 347 2.2E-96 T 14-10-2018 AMIS_6800 335db96b1b20e7e226812392d52c74cc 369 SUPERFAMILY SSF53822 43 342 1.57E-56 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_52620 bfb5d2d567ca3bfecdcec98f70330212 101 Pfam PF08922 Domain of unknown function (DUF1905) 5 96 1.7E-26 T 14-10-2018 IPR015018 Protein of unknown function DUF1905 AMIS_52620 bfb5d2d567ca3bfecdcec98f70330212 101 Gene3D G3DSA:2.40.30.100 1 98 3.3E-6 T 14-10-2018 IPR037079 AF2212/PG0164-like superfamily AMIS_52620 bfb5d2d567ca3bfecdcec98f70330212 101 SUPERFAMILY SSF141694 2 97 3.66E-17 T 14-10-2018 AMIS_62840 a13d34421ca7788b9d306a14fd7e1eee 251 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 240 33.882 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_62840 a13d34421ca7788b9d306a14fd7e1eee 251 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 238 1.2E-95 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_62840 a13d34421ca7788b9d306a14fd7e1eee 251 Pfam PF01709 Transcriptional regulator 5 238 5.4E-88 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_62840 a13d34421ca7788b9d306a14fd7e1eee 251 Gene3D G3DSA:1.10.10.200 1 80 1.7E-31 T 14-10-2018 IPR017856 Integrase-like, N-terminal AMIS_62840 a13d34421ca7788b9d306a14fd7e1eee 251 SUPERFAMILY SSF75625 3 246 1.24E-88 T 14-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_62840 a13d34421ca7788b9d306a14fd7e1eee 251 Gene3D G3DSA:3.30.70.980 86 237 1.7E-51 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_62840 a13d34421ca7788b9d306a14fd7e1eee 251 Gene3D G3DSA:3.30.70.980 134 206 1.7E-51 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_77030 fcfe0241504995141efdf9a9995f88d6 95 Pfam PF13223 Protein of unknown function (DUF4031) 2 76 1.3E-25 T 14-10-2018 IPR025109 Domain of unknown function DUF4031 AMIS_66370 d5d0f1e4cb49beab3c6926d059a2d38d 205 Pfam PF02570 Precorrin-8X methylmutase 9 202 2.9E-74 T 14-10-2018 IPR003722 Cobalamin biosynthesis precorrin-8X methylmutase CobH/CbiC GO:0009236|GO:0016993 AMIS_66370 d5d0f1e4cb49beab3c6926d059a2d38d 205 Gene3D G3DSA:3.40.50.10230 1 205 1.5E-82 T 14-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 AMIS_66370 d5d0f1e4cb49beab3c6926d059a2d38d 205 SUPERFAMILY SSF63965 2 202 2.09E-73 T 14-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 AMIS_66190 af43bd3b16137ce4ba97543d04fe7c21 263 PIRSF PIRSF006648 8 261 4.8E-30 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AMIS_66190 af43bd3b16137ce4ba97543d04fe7c21 263 Pfam PF01061 ABC-2 type transporter 14 219 1.5E-30 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 AMIS_47570 7cb1684c3cc164c2697cb64e8d028461 414 Pfam PF13941 MutL protein 4 303 3.3E-92 T 14-10-2018 IPR006230 Protein MutL AMIS_47570 7cb1684c3cc164c2697cb64e8d028461 414 Pfam PF13941 MutL protein 308 409 2.4E-17 T 14-10-2018 IPR006230 Protein MutL AMIS_52750 bd31f1c5c41d33ace26280e590ef0137 230 Pfam PF01810 LysE type translocator 31 221 2.1E-28 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AMIS_52750 bd31f1c5c41d33ace26280e590ef0137 230 PIRSF PIRSF006324 15 223 2.2E-43 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AMIS_39570 6150351045ffc158860250d1cbaafeaf 301 Gene3D G3DSA:3.40.50.1820 6 300 1.3E-66 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_39570 6150351045ffc158860250d1cbaafeaf 301 Pfam PF07859 alpha/beta hydrolase fold 66 274 2.8E-55 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 AMIS_39570 6150351045ffc158860250d1cbaafeaf 301 SUPERFAMILY SSF53474 35 296 1.52E-50 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_39570 6150351045ffc158860250d1cbaafeaf 301 ProSitePatterns PS01174 Lipolytic enzymes "G-D-X-G" family, putative serine active site. 138 150 - T 14-10-2018 IPR033140 Lipase, GDXG, putative serine active site AMIS_80440 c8a07f1b98bc36a707814a3ddea0edab 150 SUPERFAMILY SSF55785 17 92 2.17E-5 T 14-10-2018 IPR035965 PAS domain superfamily AMIS_17440 3733593c33478b8397648231c6d73e52 410 PRINTS PR00758 Arsenical pump membrane protein signature 344 369 3.1E-14 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AMIS_17440 3733593c33478b8397648231c6d73e52 410 PRINTS PR00758 Arsenical pump membrane protein signature 101 125 3.1E-14 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AMIS_17440 3733593c33478b8397648231c6d73e52 410 PRINTS PR00758 Arsenical pump membrane protein signature 174 197 3.1E-14 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AMIS_17440 3733593c33478b8397648231c6d73e52 410 Pfam PF02040 Arsenical pump membrane protein 12 396 2.2E-26 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AMIS_66010 e2eae5be01ac6e80e8eba15b51143ccb 166 SUPERFAMILY SSF109854 2 166 4.73E-33 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes AMIS_66010 e2eae5be01ac6e80e8eba15b51143ccb 166 Pfam PF12867 DinB superfamily 16 159 6.3E-19 T 14-10-2018 IPR024775 DinB-like domain AMIS_66010 e2eae5be01ac6e80e8eba15b51143ccb 166 Gene3D G3DSA:1.20.120.450 1 166 1.2E-60 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes AMIS_31310 77373ed5932f35ea7de13a0655e79fd4 298 SUPERFAMILY SSF53098 53 263 7.59E-8 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily AMIS_31310 77373ed5932f35ea7de13a0655e79fd4 298 Pfam PF13546 DDE superfamily endonuclease 2 155 4.9E-25 T 14-10-2018 IPR038721 Transposase IS701-like, DDE domain AMIS_58750 b90bbe2108d6d8d1ceba20c301c76fc5 225 SUPERFAMILY SSF102588 3 199 1.7E-46 T 14-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 AMIS_58750 b90bbe2108d6d8d1ceba20c301c76fc5 225 Gene3D G3DSA:3.40.50.10320 2 204 1.6E-53 T 14-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 AMIS_58750 b90bbe2108d6d8d1ceba20c301c76fc5 225 Pfam PF02585 GlcNAc-PI de-N-acetylase 7 121 9.1E-21 T 14-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 AMIS_12470 619fbd13d507e6549146eedf9a7dda0e 352 Pfam PF10056 Uncharacterized conserved protein (DUF2293) 264 349 2.8E-24 T 14-10-2018 IPR018744 Domain of unknown function DUF2293 AMIS_76120 763ff0b043bb9c2c3360a4f8684ab493 242 SUPERFAMILY SSF89550 17 239 4.71E-7 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AMIS_76120 763ff0b043bb9c2c3360a4f8684ab493 242 Gene3D G3DSA:3.20.20.140 7 242 2.2E-16 T 14-10-2018 AMIS_35040 a2dde67453bc9358c20e5326a5eb398b 554 SUPERFAMILY SSF48208 200 534 4.16E-63 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AMIS_35040 a2dde67453bc9358c20e5326a5eb398b 554 Gene3D G3DSA:1.50.10.10 207 533 1.7E-62 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 AMIS_58080 f4d7586fe30ee83f4148e6c31aa3408d 256 SUPERFAMILY SSF88713 64 235 2.42E-31 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AMIS_58080 f4d7586fe30ee83f4148e6c31aa3408d 256 Gene3D G3DSA:3.20.20.370 45 255 6.2E-45 T 14-10-2018 AMIS_58080 f4d7586fe30ee83f4148e6c31aa3408d 256 Pfam PF01522 Polysaccharide deacetylase 90 217 1.8E-23 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMIS_14050 8442c492b8d41cc16ad2df412084bff2 102 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 3 97 8.6E-15 T 14-10-2018 IPR008407 Branched-chain amino acid transport, AzlD AMIS_75310 b65efa0fc6fda0019b76c916398351f0 303 SUPERFAMILY SSF53448 13 292 4.96E-61 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_75310 b65efa0fc6fda0019b76c916398351f0 303 Gene3D G3DSA:3.90.550.10 7 302 2.0E-82 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_75310 b65efa0fc6fda0019b76c916398351f0 303 Pfam PF00483 Nucleotidyl transferase 14 277 6.6E-25 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AMIS_22500 acfec9c9c6cf7b43ea5c5dc2bcdf7c66 69 Pfam PF13370 4Fe-4S single cluster domain of Ferredoxin I 8 64 1.5E-13 T 14-10-2018 AMIS_22500 acfec9c9c6cf7b43ea5c5dc2bcdf7c66 69 SUPERFAMILY SSF54862 5 65 7.44E-15 T 14-10-2018 AMIS_22500 acfec9c9c6cf7b43ea5c5dc2bcdf7c66 69 PRINTS PR00352 3Fe-4S ferredoxin signature 8 19 4.5E-7 T 14-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 AMIS_22500 acfec9c9c6cf7b43ea5c5dc2bcdf7c66 69 PRINTS PR00352 3Fe-4S ferredoxin signature 19 29 4.5E-7 T 14-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 AMIS_22500 acfec9c9c6cf7b43ea5c5dc2bcdf7c66 69 PRINTS PR00352 3Fe-4S ferredoxin signature 51 63 4.5E-7 T 14-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 AMIS_22500 acfec9c9c6cf7b43ea5c5dc2bcdf7c66 69 Gene3D G3DSA:3.30.70.20 1 67 6.5E-20 T 14-10-2018 AMIS_46070 bc8b38e6f10b55f05ac8bbace773fb7f 506 Pfam PF00990 Diguanylate cyclase, GGDEF domain 330 488 3.9E-40 T 14-10-2018 IPR000160 GGDEF domain AMIS_46070 bc8b38e6f10b55f05ac8bbace773fb7f 506 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 326 491 4.2E-37 T 14-10-2018 IPR000160 GGDEF domain AMIS_46070 bc8b38e6f10b55f05ac8bbace773fb7f 506 Gene3D G3DSA:3.30.70.270 324 497 6.4E-50 T 14-10-2018 AMIS_46070 bc8b38e6f10b55f05ac8bbace773fb7f 506 SMART SM00267 319 492 2.9E-48 T 14-10-2018 IPR000160 GGDEF domain AMIS_46070 bc8b38e6f10b55f05ac8bbace773fb7f 506 SUPERFAMILY SSF55073 335 494 2.98E-42 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_9340 feca5a60e7b46698797448ce62d7c7f6 458 Pfam PF07690 Major Facilitator Superfamily 19 265 3.8E-18 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_9340 feca5a60e7b46698797448ce62d7c7f6 458 Gene3D G3DSA:1.20.1250.20 14 382 2.1E-32 T 14-10-2018 AMIS_9340 feca5a60e7b46698797448ce62d7c7f6 458 SUPERFAMILY SSF103473 15 386 4.05E-35 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_59210 0c2e5509f8b30d1cfe2cc450942b4738 323 SUPERFAMILY SSF51695 36 319 1.83E-37 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 AMIS_59210 0c2e5509f8b30d1cfe2cc450942b4738 323 Gene3D G3DSA:3.20.20.190 68 291 2.4E-31 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 AMIS_59210 0c2e5509f8b30d1cfe2cc450942b4738 323 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 42 169 5.7E-21 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 AMIS_75060 e405a7c627df11caaf2b1cf217d35843 154 Pfam PF14325 Domain of unknown function (DUF4383) 16 131 5.8E-10 T 14-10-2018 IPR025492 Protein of unknown function DUF4383 AMIS_63610 4ee9abaa4e4a5fe9f6306239e1a001c4 156 SUPERFAMILY SSF54593 31 140 1.06E-17 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_63610 4ee9abaa4e4a5fe9f6306239e1a001c4 156 Gene3D G3DSA:3.10.180.10 28 140 4.5E-23 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_63620 f9e9926629922a143776f55ae0662393 83 Pfam PF11272 Protein of unknown function (DUF3072) 26 81 1.0E-29 T 14-10-2018 IPR021425 Protein of unknown function DUF3072 AMIS_13220 8c1dbd64eca9ac014fee200d6fa26398 167 Gene3D G3DSA:2.40.380.10 3 167 2.8E-12 T 14-10-2018 IPR035930 FomD-like superfamily AMIS_13220 8c1dbd64eca9ac014fee200d6fa26398 167 Pfam PF04167 Protein of unknown function (DUF402) 56 122 3.7E-16 T 14-10-2018 IPR007295 Domain of unknown function DUF402 AMIS_13220 8c1dbd64eca9ac014fee200d6fa26398 167 SUPERFAMILY SSF159234 4 164 8.5E-17 T 14-10-2018 IPR035930 FomD-like superfamily AMIS_46060 6d8a3905fce0b8b5ef3346b0c0eaf359 359 SUPERFAMILY SSF52266 61 356 1.08E-26 T 14-10-2018 AMIS_46060 6d8a3905fce0b8b5ef3346b0c0eaf359 359 Gene3D G3DSA:3.40.50.1110 138 356 1.5E-21 T 14-10-2018 IPR036514 SGNH hydrolase superfamily AMIS_46060 6d8a3905fce0b8b5ef3346b0c0eaf359 359 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 206 346 1.4E-16 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain AMIS_43960 65b9fc6780f0e87e8b488ec42d999f4b 267 Gene3D G3DSA:3.50.30.50 35 267 3.2E-70 T 14-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 AMIS_43960 65b9fc6780f0e87e8b488ec42d999f4b 267 SUPERFAMILY SSF102198 44 266 3.79E-52 T 14-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 AMIS_43960 65b9fc6780f0e87e8b488ec42d999f4b 267 Pfam PF04199 Putative cyclase 45 210 7.6E-35 T 14-10-2018 IPR007325 Kynurenine formamidase/cyclase-like GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 AMIS_18370 dab9147f8760b730750273bb72a9310f 279 SUPERFAMILY SSF52266 42 276 3.16E-55 T 14-10-2018 AMIS_18370 dab9147f8760b730750273bb72a9310f 279 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 46 269 4.8E-24 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain AMIS_18370 dab9147f8760b730750273bb72a9310f 279 Gene3D G3DSA:3.40.50.1110 41 277 5.3E-65 T 14-10-2018 IPR036514 SGNH hydrolase superfamily AMIS_12740 3ee0ead5d42f491f98924feeb6d9d8b5 85 Pfam PF12728 Helix-turn-helix domain 15 52 1.1E-6 T 14-10-2018 AMIS_12740 3ee0ead5d42f491f98924feeb6d9d8b5 85 SUPERFAMILY SSF46955 15 58 2.5E-6 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily AMIS_57020 cb42b81b372dabdcd5adf6aba3f09502 1103 SUPERFAMILY SSF52540 188 346 4.04E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_57020 cb42b81b372dabdcd5adf6aba3f09502 1103 Gene3D G3DSA:3.40.50.300 167 347 1.9E-5 T 14-10-2018 AMIS_57020 cb42b81b372dabdcd5adf6aba3f09502 1103 Pfam PF05729 NACHT domain 192 351 2.9E-12 T 14-10-2018 IPR007111 NACHT nucleoside triphosphatase AMIS_59560 67346dc2f7f919ae478e88b8643a81c9 221 Gene3D G3DSA:2.60.120.1060 75 205 1.0E-5 T 14-10-2018 IPR038637 NPCBM domain superfamily AMIS_59560 67346dc2f7f919ae478e88b8643a81c9 221 SUPERFAMILY SSF49785 96 199 2.81E-5 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_59560 67346dc2f7f919ae478e88b8643a81c9 221 Pfam PF08305 NPCBM/NEW2 domain 101 202 5.1E-6 T 14-10-2018 IPR013222 Glycosyl hydrolase family 98, putative carbohydrate-binding module AMIS_56280 bdf519fd52951600af168fc0aaa9b128 446 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 352 371 6.4E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_56280 bdf519fd52951600af168fc0aaa9b128 446 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 279 290 6.4E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_56280 bdf519fd52951600af168fc0aaa9b128 446 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 332 340 6.4E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_56280 bdf519fd52951600af168fc0aaa9b128 446 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 212 439 3.4E-45 T 14-10-2018 AMIS_56280 bdf519fd52951600af168fc0aaa9b128 446 Gene3D G3DSA:3.40.50.720 24 199 2.5E-52 T 14-10-2018 AMIS_56280 bdf519fd52951600af168fc0aaa9b128 446 SUPERFAMILY SSF51735 202 442 1.0E-55 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_56280 bdf519fd52951600af168fc0aaa9b128 446 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 206 383 8.0E-5 T 14-10-2018 AMIS_56280 bdf519fd52951600af168fc0aaa9b128 446 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 326 342 1.8E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_56280 bdf519fd52951600af168fc0aaa9b128 446 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 224 1.8E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_56280 bdf519fd52951600af168fc0aaa9b128 446 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 279 290 1.8E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_56280 bdf519fd52951600af168fc0aaa9b128 446 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 352 371 1.8E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_56280 bdf519fd52951600af168fc0aaa9b128 446 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 406 426 1.8E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_56280 bdf519fd52951600af168fc0aaa9b128 446 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 373 390 1.8E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMIS_56280 bdf519fd52951600af168fc0aaa9b128 446 Gene3D G3DSA:3.40.50.720 201 445 1.3E-63 T 14-10-2018 AMIS_31090 96ce50ad613f28cf6e306aecc1f39f06 125 Pfam PF15580 Immunity protein 53 28 117 2.6E-37 T 14-10-2018 IPR028228 Immunity protein 53 AMIS_71230 e64eb2dde2de9c2c1f67516b4f61aba8 808 Pfam PF00563 EAL domain 494 727 9.1E-68 T 14-10-2018 IPR001633 EAL domain AMIS_71230 e64eb2dde2de9c2c1f67516b4f61aba8 808 SMART SM00267 308 478 1.5E-39 T 14-10-2018 IPR000160 GGDEF domain AMIS_71230 e64eb2dde2de9c2c1f67516b4f61aba8 808 SUPERFAMILY SSF55073 324 479 1.33E-35 T 14-10-2018 IPR029787 Nucleotide cyclase AMIS_71230 e64eb2dde2de9c2c1f67516b4f61aba8 808 SUPERFAMILY SSF141868 494 742 3.27E-78 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_71230 e64eb2dde2de9c2c1f67516b4f61aba8 808 SMART SM00052 488 734 3.2E-91 T 14-10-2018 IPR001633 EAL domain AMIS_71230 e64eb2dde2de9c2c1f67516b4f61aba8 808 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 317 476 5.2E-31 T 14-10-2018 IPR000160 GGDEF domain AMIS_71230 e64eb2dde2de9c2c1f67516b4f61aba8 808 Gene3D G3DSA:3.20.20.450 489 745 2.1E-90 T 14-10-2018 IPR035919 EAL domain superfamily AMIS_71230 e64eb2dde2de9c2c1f67516b4f61aba8 808 Gene3D G3DSA:3.30.70.270 314 482 1.2E-42 T 14-10-2018 AMIS_71230 e64eb2dde2de9c2c1f67516b4f61aba8 808 Pfam PF00990 Diguanylate cyclase, GGDEF domain 319 474 2.2E-32 T 14-10-2018 IPR000160 GGDEF domain AMIS_73320 fc4d5e49c675ade535bc26cb69cd2d3f 120 Pfam PF02467 Transcription factor WhiB 19 68 1.7E-13 T 14-10-2018 IPR034768 WhiB-like iron-sulfur binding domain AMIS_73320 fc4d5e49c675ade535bc26cb69cd2d3f 120 Hamap MF_01479 Transcriptional regulator WhiB [whiB]. 1 82 16.229 T 14-10-2018 IPR003482 Transcription factor WhiB AMIS_80010 b3e1706c7dd3331c0b951d60c0c1f42b 176 SUPERFAMILY SSF49777 8 166 8.77E-45 T 14-10-2018 IPR036610 PEBP-like superfamily AMIS_80010 b3e1706c7dd3331c0b951d60c0c1f42b 176 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 42 169 8.7E-36 T 14-10-2018 IPR005247 YbhB/YbcL AMIS_80010 b3e1706c7dd3331c0b951d60c0c1f42b 176 Gene3D G3DSA:3.90.280.10 5 174 3.4E-50 T 14-10-2018 IPR036610 PEBP-like superfamily AMIS_80010 b3e1706c7dd3331c0b951d60c0c1f42b 176 Pfam PF01161 Phosphatidylethanolamine-binding protein 41 172 1.7E-33 T 14-10-2018 IPR008914 Phosphatidylethanolamine-binding protein AMIS_21850 f4d50c2076b6c61832d58db05664723e 336 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 13 321 7.1E-48 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AMIS_21850 f4d50c2076b6c61832d58db05664723e 336 PIRSF PIRSF006278 1 335 2.4E-120 T 14-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase AMIS_21850 f4d50c2076b6c61832d58db05664723e 336 SUPERFAMILY SSF53686 4 333 5.62E-98 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMIS_21850 f4d50c2076b6c61832d58db05664723e 336 TIGRFAM TIGR01274 ACC_deam: 1-aminocyclopropane-1-carboxylate deaminase 3 334 1.2E-165 T 14-10-2018 IPR005965 1-aminocyclopropane-1-carboxylate deaminase GO:0008660|GO:0009310|GO:0030170 KEGG: 00270+3.5.99.7 AMIS_21850 f4d50c2076b6c61832d58db05664723e 336 Gene3D G3DSA:3.40.50.1100 7 328 2.9E-113 T 14-10-2018 AMIS_21850 f4d50c2076b6c61832d58db05664723e 336 Gene3D G3DSA:3.40.50.1100 66 164 2.9E-113 T 14-10-2018 AMIS_79820 7a933335afb19780d25d01977ee53385 468 Gene3D G3DSA:1.20.1720.10 21 227 2.7E-39 T 14-10-2018 AMIS_79820 7a933335afb19780d25d01977ee53385 468 Pfam PF07690 Major Facilitator Superfamily 25 416 1.7E-41 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_79820 7a933335afb19780d25d01977ee53385 468 Gene3D G3DSA:1.20.1250.20 268 467 6.4E-17 T 14-10-2018 AMIS_79820 7a933335afb19780d25d01977ee53385 468 SUPERFAMILY SSF103473 18 462 8.72E-55 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_10320 a435b9789e582415b14f75cae9558d7e 352 Pfam PF10282 Lactonase, 7-bladed beta-propeller 8 342 2.2E-89 T 14-10-2018 IPR019405 Lactonase, 7-bladed beta propeller AMIS_10320 a435b9789e582415b14f75cae9558d7e 352 Gene3D G3DSA:2.130.10.10 1 344 4.5E-103 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMIS_10320 a435b9789e582415b14f75cae9558d7e 352 SUPERFAMILY SSF51004 21 344 1.57E-33 T 14-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily AMIS_52480 0431a6bb0e98c9353ced8233c846cd55 851 Pfam PF02687 FtsX-like permease family 755 844 2.3E-11 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AMIS_45170 7c8f3307442de1573b158c8cafc4348f 200 Gene3D G3DSA:3.30.530.20 48 193 6.4E-36 T 14-10-2018 IPR023393 START-like domain superfamily AMIS_45170 7c8f3307442de1573b158c8cafc4348f 200 SUPERFAMILY SSF55961 48 188 4.45E-29 T 14-10-2018 AMIS_45170 7c8f3307442de1573b158c8cafc4348f 200 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 76 187 1.7E-9 T 14-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like AMIS_5340 8fcdc194558598440d6c0c9b7f048688 386 Gene3D G3DSA:3.40.50.150 125 343 5.9E-13 T 14-10-2018 AMIS_5340 8fcdc194558598440d6c0c9b7f048688 386 SUPERFAMILY SSF53335 160 290 9.45E-17 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_5340 8fcdc194558598440d6c0c9b7f048688 386 Pfam PF13679 Methyltransferase domain 155 290 2.7E-29 T 14-10-2018 IPR025714 Methyltransferase domain AMIS_69520 e5e8361cbadde513e81f5c598d5ccf7a 321 Gene3D G3DSA:1.20.144.10 226 320 3.3E-10 T 14-10-2018 AMIS_69520 e5e8361cbadde513e81f5c598d5ccf7a 321 Pfam PF14378 PAP2 superfamily 135 304 2.1E-28 T 14-10-2018 IPR026841 Inositolphosphotransferase Aur1/Ipt1 AMIS_69520 e5e8361cbadde513e81f5c598d5ccf7a 321 SUPERFAMILY SSF48317 124 316 6.54E-6 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily AMIS_19070 7489c25e2bd7ab61ad0dab731e316bfa 169 Pfam PF16571 FBP C-terminal treble-clef zinc-finger 8 166 5.6E-59 T 14-10-2018 IPR032330 Elongation factor G-binding protein, C-terminal treble-clef zinc-finger AMIS_52500 11feae8ceaf537ca16ace8e95443f9b2 387 Pfam PF07730 Histidine kinase 177 242 3.5E-14 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMIS_52500 11feae8ceaf537ca16ace8e95443f9b2 387 SUPERFAMILY SSF55874 283 381 2.36E-13 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_52500 11feae8ceaf537ca16ace8e95443f9b2 387 Gene3D G3DSA:3.30.565.10 255 382 3.3E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_27260 3cd6868b00af2028c4e23ac3ca10833b 361 SUPERFAMILY SSF51679 1 352 1.44E-59 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_27260 3cd6868b00af2028c4e23ac3ca10833b 361 Gene3D G3DSA:3.20.20.30 1 352 6.2E-74 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_27260 3cd6868b00af2028c4e23ac3ca10833b 361 Pfam PF00296 Luciferase-like monooxygenase 1 313 6.2E-36 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMIS_41280 2fbe5c4626824aee4c582dbc71d199da 257 Pfam PF01061 ABC-2 type transporter 22 220 5.3E-16 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 AMIS_41280 2fbe5c4626824aee4c582dbc71d199da 257 PIRSF PIRSF006648 3 255 3.5E-20 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AMIS_43190 c3359fe1e1f61774f0e23dc0c535dbfa 259 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 258 5.5E-53 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AMIS_43190 c3359fe1e1f61774f0e23dc0c535dbfa 259 Gene3D G3DSA:3.90.226.10 7 200 1.7E-60 T 14-10-2018 AMIS_43190 c3359fe1e1f61774f0e23dc0c535dbfa 259 Gene3D G3DSA:1.10.12.10 203 259 5.2E-18 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal AMIS_43190 c3359fe1e1f61774f0e23dc0c535dbfa 259 SUPERFAMILY SSF52096 8 259 3.38E-76 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMIS_68800 4e7121ab06c01a58ae0fecbccaff946e 415 SUPERFAMILY SSF53098 34 411 9.86E-30 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily AMIS_68800 4e7121ab06c01a58ae0fecbccaff946e 415 Pfam PF13546 DDE superfamily endonuclease 20 288 2.8E-79 T 14-10-2018 IPR038721 Transposase IS701-like, DDE domain AMIS_57350 214ddcdd21cc75fa2c0e35c69fab7627 243 SUPERFAMILY SSF52540 4 236 4.0E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_57350 214ddcdd21cc75fa2c0e35c69fab7627 243 SMART SM00382 31 243 2.9E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_57350 214ddcdd21cc75fa2c0e35c69fab7627 243 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_57350 214ddcdd21cc75fa2c0e35c69fab7627 243 Gene3D G3DSA:3.40.50.300 2 238 2.4E-53 T 14-10-2018 AMIS_57350 214ddcdd21cc75fa2c0e35c69fab7627 243 Pfam PF00005 ABC transporter 24 165 3.9E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_16430 f5b8a71b799d0ee7d4f71c7ac9736825 262 Pfam PF00378 Enoyl-CoA hydratase/isomerase 21 249 9.3E-42 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AMIS_16430 f5b8a71b799d0ee7d4f71c7ac9736825 262 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 118 138 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 AMIS_16430 f5b8a71b799d0ee7d4f71c7ac9736825 262 Gene3D G3DSA:3.90.226.10 11 257 6.0E-66 T 14-10-2018 AMIS_16430 f5b8a71b799d0ee7d4f71c7ac9736825 262 SUPERFAMILY SSF52096 15 254 1.02E-63 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMIS_69660 b1c9c96d2088d3611ac9903ac06bd653 163 SUPERFAMILY SSF75420 2 78 9.81E-19 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily AMIS_69660 b1c9c96d2088d3611ac9903ac06bd653 163 Pfam PF02576 RimP N-terminal domain 2 78 1.7E-22 T 14-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal AMIS_69660 b1c9c96d2088d3611ac9903ac06bd653 163 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 3 137 18.047 T 14-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 AMIS_69660 b1c9c96d2088d3611ac9903ac06bd653 163 Gene3D G3DSA:3.30.300.70 1 75 6.0E-17 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily AMIS_70780 75c94b6684bffcb0fc4af32919032a3f 63 Pfam PF00830 Ribosomal L28 family 4 59 1.6E-22 T 14-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_70780 75c94b6684bffcb0fc4af32919032a3f 63 SUPERFAMILY SSF143800 2 61 2.75E-23 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_70780 75c94b6684bffcb0fc4af32919032a3f 63 Gene3D G3DSA:2.30.170.40 19 63 2.4E-19 T 14-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_70780 75c94b6684bffcb0fc4af32919032a3f 63 TIGRFAM TIGR00009 L28: ribosomal protein bL28 2 57 1.8E-21 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_70780 75c94b6684bffcb0fc4af32919032a3f 63 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 63 17.975 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMIS_73430 9caa11ecbc50d85b41a5cb22f4fb4b69 313 SUPERFAMILY SSF161098 109 297 5.49E-26 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_73430 9caa11ecbc50d85b41a5cb22f4fb4b69 313 Gene3D G3DSA:1.10.3720.10 105 304 1.1E-20 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_73430 9caa11ecbc50d85b41a5cb22f4fb4b69 313 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 129 306 1.8E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_10600 36fba5e45525ac6e074866c59542c4d6 564 Pfam PF07690 Major Facilitator Superfamily 26 424 5.4E-53 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_10600 36fba5e45525ac6e074866c59542c4d6 564 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 21 521 1.3E-78 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 AMIS_10600 36fba5e45525ac6e074866c59542c4d6 564 Gene3D G3DSA:1.20.1720.10 23 232 1.3E-50 T 14-10-2018 AMIS_10600 36fba5e45525ac6e074866c59542c4d6 564 SUPERFAMILY SSF103473 23 527 4.32E-69 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_66410 94b901ad3cc66d4f9ea3b5822896de6e 415 SUPERFAMILY SSF53756 2 411 1.79E-64 T 14-10-2018 AMIS_66410 94b901ad3cc66d4f9ea3b5822896de6e 415 Gene3D G3DSA:3.40.50.2000 229 390 3.1E-33 T 14-10-2018 AMIS_66410 94b901ad3cc66d4f9ea3b5822896de6e 415 Pfam PF13439 Glycosyltransferase Family 4 14 213 4.9E-20 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AMIS_66410 94b901ad3cc66d4f9ea3b5822896de6e 415 Pfam PF13692 Glycosyl transferases group 1 238 376 3.5E-19 T 14-10-2018 AMIS_74060 e7e17c89f77b51e3e2436951c7c3016f 160 Pfam PF00583 Acetyltransferase (GNAT) family 48 128 1.1E-13 T 14-10-2018 IPR000182 GNAT domain AMIS_74060 e7e17c89f77b51e3e2436951c7c3016f 160 SUPERFAMILY SSF55729 5 136 1.37E-25 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_74060 e7e17c89f77b51e3e2436951c7c3016f 160 Gene3D G3DSA:3.40.630.30 2 154 6.2E-36 T 14-10-2018 AMIS_74600 4f04a690d8b446ef78c6dd99451f3b68 338 Pfam PF14257 Domain of unknown function (DUF4349) 36 314 2.1E-68 T 14-10-2018 IPR025645 Domain of unknown function DUF4349 AMIS_16560 fd9e03df100ca439b3ff534f1f98eac9 319 Pfam PF07859 alpha/beta hydrolase fold 82 291 1.1E-68 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 AMIS_16560 fd9e03df100ca439b3ff534f1f98eac9 319 SUPERFAMILY SSF53474 41 316 7.87E-67 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_16560 fd9e03df100ca439b3ff534f1f98eac9 319 Gene3D G3DSA:3.40.50.1820 7 319 4.3E-91 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_48770 54baee62d41fd7b39d0caa3f08373deb 293 Pfam PF12695 Alpha/beta hydrolase family 149 217 3.2E-7 T 14-10-2018 IPR029059 Alpha/beta hydrolase fold-5 AMIS_48770 54baee62d41fd7b39d0caa3f08373deb 293 Gene3D G3DSA:3.40.50.1820 28 293 8.0E-82 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_48770 54baee62d41fd7b39d0caa3f08373deb 293 SUPERFAMILY SSF53474 38 277 5.91E-44 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_4760 2d1e48e5e6f59e376daf67807a36b371 550 Pfam PF00999 Sodium/hydrogen exchanger family 12 416 6.8E-53 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AMIS_4760 2d1e48e5e6f59e376daf67807a36b371 550 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 9 542 1.2E-89 T 14-10-2018 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 AMIS_30270 ee00b1c87f1658824fc4fb06757232ec 205 Pfam PF11611 Domain of unknown function (DUF4352) 77 195 3.3E-22 T 14-10-2018 IPR029051 Domain of unknown function DUF4352 AMIS_30270 ee00b1c87f1658824fc4fb06757232ec 205 Gene3D G3DSA:2.60.40.1240 70 192 1.3E-21 T 14-10-2018 IPR029050 Immunoprotective extracellular, immunoglobulin-like domain superfamily AMIS_54670 f334474e8ae57d4f8315487d9bebefc3 204 SUPERFAMILY SSF52317 12 191 9.62E-50 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_54670 f334474e8ae57d4f8315487d9bebefc3 204 Pfam PF01965 DJ-1/PfpI family 13 188 6.0E-48 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 AMIS_54670 f334474e8ae57d4f8315487d9bebefc3 204 Gene3D G3DSA:3.40.50.880 9 195 1.1E-49 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_54670 f334474e8ae57d4f8315487d9bebefc3 204 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 14 191 1.2E-51 T 14-10-2018 IPR006286 Deglycase PfpI AMIS_25810 060d629c605efecbe447883f3c850464 285 Pfam PF12697 Alpha/beta hydrolase family 11 279 3.5E-24 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_25810 060d629c605efecbe447883f3c850464 285 Gene3D G3DSA:3.40.50.1820 7 285 1.5E-54 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_25810 060d629c605efecbe447883f3c850464 285 SUPERFAMILY SSF53474 8 283 7.91E-31 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_24990 e2da0143f070dd2bb68b1a37f591a919 69 Pfam PF07311 Dodecin 5 68 1.2E-28 T 14-10-2018 IPR009923 Dodecin AMIS_24990 e2da0143f070dd2bb68b1a37f591a919 69 SUPERFAMILY SSF89807 3 68 5.23E-24 T 14-10-2018 IPR036694 Dodecin-like superfamily AMIS_24990 e2da0143f070dd2bb68b1a37f591a919 69 Gene3D G3DSA:3.30.1660.10 2 69 2.7E-32 T 14-10-2018 IPR025543 Dodecin-like AMIS_15220 4a61623890fe701279a2ac4eca487c81 465 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 368 392 - T 14-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMIS_15220 4a61623890fe701279a2ac4eca487c81 465 Pfam PF01098 Cell cycle protein 35 408 6.0E-87 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMIS_26250 eedb1ffb0120964681b68559f9476628 135 Gene3D G3DSA:3.30.1330.40 1 135 6.2E-23 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AMIS_26250 eedb1ffb0120964681b68559f9476628 135 Pfam PF01042 Endoribonuclease L-PSP 21 133 1.7E-16 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 AMIS_26250 eedb1ffb0120964681b68559f9476628 135 SUPERFAMILY SSF55298 3 134 7.85E-24 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AMIS_32240 7a2c9cfd6e2a6cb2553d75ba6b23503d 466 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 384 393 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 AMIS_32240 7a2c9cfd6e2a6cb2553d75ba6b23503d 466 Pfam PF00067 Cytochrome P450 8 424 2.1E-58 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_32240 7a2c9cfd6e2a6cb2553d75ba6b23503d 466 PRINTS PR00465 E-class P450 group IV signature 391 409 1.3E-19 T 14-10-2018 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_32240 7a2c9cfd6e2a6cb2553d75ba6b23503d 466 PRINTS PR00465 E-class P450 group IV signature 375 391 1.3E-19 T 14-10-2018 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_32240 7a2c9cfd6e2a6cb2553d75ba6b23503d 466 PRINTS PR00465 E-class P450 group IV signature 31 54 1.3E-19 T 14-10-2018 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_32240 7a2c9cfd6e2a6cb2553d75ba6b23503d 466 PRINTS PR00465 E-class P450 group IV signature 338 352 1.3E-19 T 14-10-2018 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_32240 7a2c9cfd6e2a6cb2553d75ba6b23503d 466 PRINTS PR00465 E-class P450 group IV signature 305 321 1.3E-19 T 14-10-2018 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_32240 7a2c9cfd6e2a6cb2553d75ba6b23503d 466 Gene3D G3DSA:1.10.630.10 3 442 8.4E-97 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_32240 7a2c9cfd6e2a6cb2553d75ba6b23503d 466 SUPERFAMILY SSF48264 7 439 3.27E-91 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_32240 7a2c9cfd6e2a6cb2553d75ba6b23503d 466 PRINTS PR00385 P450 superfamily signature 310 321 8.8E-9 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_32240 7a2c9cfd6e2a6cb2553d75ba6b23503d 466 PRINTS PR00385 P450 superfamily signature 382 391 8.8E-9 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_32240 7a2c9cfd6e2a6cb2553d75ba6b23503d 466 PRINTS PR00385 P450 superfamily signature 258 275 8.8E-9 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_32240 7a2c9cfd6e2a6cb2553d75ba6b23503d 466 PRINTS PR00385 P450 superfamily signature 391 402 8.8E-9 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_23670 6443123ee1f52777d21aedf7d96bf182 154 SUPERFAMILY SSF54637 14 146 3.45E-25 T 14-10-2018 IPR029069 HotDog domain superfamily AMIS_23670 6443123ee1f52777d21aedf7d96bf182 154 Gene3D G3DSA:3.10.129.10 15 150 3.8E-23 T 14-10-2018 AMIS_23670 6443123ee1f52777d21aedf7d96bf182 154 Pfam PF03061 Thioesterase superfamily 31 117 2.8E-11 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AMIS_15350 2201bd356afe7d5d13226a273e0a4b90 322 SUPERFAMILY SSF55120 92 319 5.44E-68 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMIS_15350 2201bd356afe7d5d13226a273e0a4b90 322 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 149 163 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMIS_15350 2201bd356afe7d5d13226a273e0a4b90 322 Gene3D G3DSA:3.10.290.10 17 80 5.9E-9 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AMIS_15350 2201bd356afe7d5d13226a273e0a4b90 322 SUPERFAMILY SSF55174 26 118 2.5E-8 T 14-10-2018 AMIS_15350 2201bd356afe7d5d13226a273e0a4b90 322 Gene3D G3DSA:3.30.2350.10 95 321 1.1E-67 T 14-10-2018 AMIS_15350 2201bd356afe7d5d13226a273e0a4b90 322 Pfam PF00849 RNA pseudouridylate synthase 103 257 5.3E-31 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMIS_15350 2201bd356afe7d5d13226a273e0a4b90 322 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 27 318 1.1E-86 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMIS_37760 e804fa15640509fdf240b83175409c73 308 Gene3D G3DSA:1.10.3720.10 62 301 2.5E-59 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_37760 e804fa15640509fdf240b83175409c73 308 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 289 2.0E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_37760 e804fa15640509fdf240b83175409c73 308 SUPERFAMILY SSF161098 66 289 1.07E-50 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_4120 b5d3eb3541adeb8f7f0127e508a77e08 239 Pfam PF13490 Putative zinc-finger 11 41 5.6E-8 T 14-10-2018 IPR027383 Putative zinc-finger AMIS_4120 b5d3eb3541adeb8f7f0127e508a77e08 239 Gene3D G3DSA:1.10.10.1320 9 64 6.4E-13 T 14-10-2018 AMIS_45400 7107dd25693155f5d00d6b4756fc6893 113 Gene3D G3DSA:3.10.180.10 1 112 1.3E-25 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_45400 7107dd25693155f5d00d6b4756fc6893 113 SUPERFAMILY SSF54593 8 108 1.48E-13 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_68600 76be8534c59dbb9254c03686689eefff 206 Pfam PF03458 UPF0126 domain 9 83 1.3E-19 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 AMIS_68600 76be8534c59dbb9254c03686689eefff 206 Pfam PF03458 UPF0126 domain 95 168 6.7E-21 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 AMIS_54860 253a96cbfa928b1c768876dcbec0c4ea 285 Gene3D G3DSA:3.60.110.10 4 285 6.4E-100 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AMIS_54860 253a96cbfa928b1c768876dcbec0c4ea 285 Pfam PF00795 Carbon-nitrogen hydrolase 12 265 8.1E-65 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 AMIS_54860 253a96cbfa928b1c768876dcbec0c4ea 285 SUPERFAMILY SSF56317 9 283 1.7E-80 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AMIS_24850 4e5b698b9470a6add4714d19f71b7e72 242 Pfam PF14256 YwiC-like protein 14 138 4.7E-40 T 14-10-2018 IPR025576 YwiC-like protein AMIS_70010 f23b1f241cbc8585c965823548af158c 79 Pfam PF10939 Protein of unknown function (DUF2631) 20 57 5.0E-8 T 14-10-2018 IPR024341 Protein of unknown function DUF2631 AMIS_7370 7cb8cb9a901d0ff0b6277f10922507ac 455 Pfam PF04932 O-Antigen ligase 247 347 2.0E-7 T 14-10-2018 IPR007016 O-antigen ligase-related AMIS_23650 7a669b0625d22fb923041fe7ee3c3c33 145 SUPERFAMILY SSF88697 15 143 3.48E-8 T 14-10-2018 IPR015947 PUA-like superfamily AMIS_22130 41702a5bc7f88f4d3f459ea8788cf967 114 Gene3D G3DSA:1.10.10.10 1 110 2.2E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_22130 41702a5bc7f88f4d3f459ea8788cf967 114 SUPERFAMILY SSF46785 12 100 4.73E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_22130 41702a5bc7f88f4d3f459ea8788cf967 114 Pfam PF03551 Transcriptional regulator PadR-like family 25 88 3.2E-17 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal AMIS_69150 acbc29683059094be242f94ddad1f4e5 218 Pfam PF01810 LysE type translocator 18 215 1.7E-47 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AMIS_69150 acbc29683059094be242f94ddad1f4e5 218 PIRSF PIRSF006324 4 217 4.9E-51 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AMIS_3490 86b7b2461a99107759dc75a8fb8998ce 84 Pfam PF04149 Domain of unknown function (DUF397) 27 77 3.1E-17 T 14-10-2018 IPR007278 Domain of unknown function DUF397 AMIS_4940 62fd95d0ad39711be8ee609bb499abe9 412 Gene3D G3DSA:3.40.50.720 9 163 3.0E-36 T 14-10-2018 AMIS_4940 62fd95d0ad39711be8ee609bb499abe9 412 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 10 120 3.0E-12 T 14-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 AMIS_4940 62fd95d0ad39711be8ee609bb499abe9 412 SUPERFAMILY SSF51735 9 163 6.62E-16 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_17950 26ee22350968b024282f6297675700d8 256 SUPERFAMILY SSF56300 8 238 3.8E-40 T 14-10-2018 AMIS_17950 26ee22350968b024282f6297675700d8 256 Gene3D G3DSA:3.60.21.10 2 251 4.8E-31 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like AMIS_17950 26ee22350968b024282f6297675700d8 256 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 8 228 2.9E-13 T 14-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 AMIS_14040 0a469ecf50c97290fc1cb9db30dd476e 231 Pfam PF03591 AzlC protein 15 147 7.6E-35 T 14-10-2018 IPR011606 Branched-chain amino acid transport, permease AMIS_68810 1f320e14f2935e3978581e724c3b2892 262 Pfam PF07070 SpoOM protein 3 218 3.6E-79 T 14-10-2018 IPR009776 Sporulation stage 0, protein M AMIS_36400 fd797bc4f63b8f77a841e5b0d9a3fdad 455 PIRSF PIRSF006060 2 455 4.6E-78 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AMIS_36400 fd797bc4f63b8f77a841e5b0d9a3fdad 455 Pfam PF13520 Amino acid permease 23 411 1.2E-46 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AMIS_36400 fd797bc4f63b8f77a841e5b0d9a3fdad 455 Gene3D G3DSA:1.20.1740.10 13 451 1.7E-81 T 14-10-2018 AMIS_38020 a0229873223557032eb522e86273aa55 534 SUPERFAMILY SSF53649 277 470 1.65E-7 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AMIS_38020 a0229873223557032eb522e86273aa55 534 Gene3D G3DSA:3.40.720.10 219 501 3.9E-18 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AMIS_16890 cc666c32ffade1769be65f37da2d5e51 347 Pfam PF00144 Beta-lactamase 5 321 3.3E-41 T 14-10-2018 IPR001466 Beta-lactamase-related AMIS_16890 cc666c32ffade1769be65f37da2d5e51 347 SUPERFAMILY SSF56601 11 327 2.41E-48 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMIS_16890 cc666c32ffade1769be65f37da2d5e51 347 Gene3D G3DSA:3.40.710.30 3 346 2.6E-92 T 14-10-2018 AMIS_14980 df2c950bedfb5a92322001f6a99d8d7a 388 Pfam PF01022 Bacterial regulatory protein, arsR family 301 331 1.4E-4 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_14980 df2c950bedfb5a92322001f6a99d8d7a 388 SUPERFAMILY SSF46785 284 352 1.95E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_14980 df2c950bedfb5a92322001f6a99d8d7a 388 Gene3D G3DSA:1.10.10.10 275 361 2.2E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_14980 df2c950bedfb5a92322001f6a99d8d7a 388 SMART SM00418 281 356 6.9E-4 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_35980 38bd08198d06f2517c98704385bafa9a 358 Gene3D G3DSA:1.10.260.150 27 345 3.6E-55 T 14-10-2018 AMIS_35980 38bd08198d06f2517c98704385bafa9a 358 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 62 255 9.6E-27 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain AMIS_20830 8945c3d34ec36f3549a28fc7666ea084 249 Gene3D G3DSA:2.60.40.10 208 248 1.4E-8 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_20830 8945c3d34ec36f3549a28fc7666ea084 249 SUPERFAMILY SSF49265 208 247 1.28E-7 T 14-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 AMIS_41860 a3a2a04aa655e511b69a719c880c77dc 464 Gene3D G3DSA:1.10.510.40 295 446 1.5E-13 T 14-10-2018 AMIS_41860 a3a2a04aa655e511b69a719c880c77dc 464 Pfam PF04183 IucA / IucC family 113 161 4.9E-11 T 14-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 AMIS_41860 a3a2a04aa655e511b69a719c880c77dc 464 Pfam PF04183 IucA / IucC family 169 297 6.2E-19 T 14-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 AMIS_41860 a3a2a04aa655e511b69a719c880c77dc 464 Pfam PF06276 Ferric iron reductase FhuF-like transporter 323 421 1.8E-11 T 14-10-2018 IPR022770 Ferric iron reductase FhuF domain AMIS_48660 eea599f9f65d1480f578842412897af7 334 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 6 312 1.1E-108 T 14-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 AMIS_48660 eea599f9f65d1480f578842412897af7 334 Pfam PF03741 Integral membrane protein TerC family 70 273 4.6E-51 T 14-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 AMIS_41900 270f8ed1ec60545d574178a6813eb8ed 244 SUPERFAMILY SSF53474 23 243 3.96E-19 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_41900 270f8ed1ec60545d574178a6813eb8ed 244 Gene3D G3DSA:3.40.50.1820 3 243 6.5E-47 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_67960 87231825efcccab9a213c74e4973b0f3 237 SUPERFAMILY SSF55021 3 70 3.33E-7 T 14-10-2018 AMIS_67960 87231825efcccab9a213c74e4973b0f3 237 Gene3D G3DSA:3.30.70.260 2 73 3.9E-5 T 14-10-2018 AMIS_58570 108b95f5c0511bb3e001a2be9c035f6e 223 Gene3D G3DSA:3.30.70.1450 145 220 3.0E-15 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AMIS_58570 108b95f5c0511bb3e001a2be9c035f6e 223 SUPERFAMILY SSF51735 10 139 6.62E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_58570 108b95f5c0511bb3e001a2be9c035f6e 223 SUPERFAMILY SSF116726 141 220 9.55E-14 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AMIS_58570 108b95f5c0511bb3e001a2be9c035f6e 223 Pfam PF02254 TrkA-N domain 12 127 9.2E-25 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AMIS_58570 108b95f5c0511bb3e001a2be9c035f6e 223 Gene3D G3DSA:3.40.50.720 7 144 1.3E-33 T 14-10-2018 AMIS_58570 108b95f5c0511bb3e001a2be9c035f6e 223 Pfam PF02080 TrkA-C domain 166 220 5.5E-8 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AMIS_46470 95eddfbb8864160db4c26a570929a1b7 210 Pfam PF07947 YhhN family 36 202 7.8E-28 T 14-10-2018 IPR012506 YhhN-like GO:0016021 AMIS_81200 a379937f715df510d5f84ba1f1a3a2d6 241 SUPERFAMILY SSF53335 21 207 4.66E-29 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_81200 a379937f715df510d5f84ba1f1a3a2d6 241 Pfam PF02527 rRNA small subunit methyltransferase G 21 193 1.4E-50 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AMIS_81200 a379937f715df510d5f84ba1f1a3a2d6 241 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 10 189 23.973 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AMIS_81200 a379937f715df510d5f84ba1f1a3a2d6 241 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 23 188 7.4E-39 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AMIS_81200 a379937f715df510d5f84ba1f1a3a2d6 241 Gene3D G3DSA:3.40.50.150 4 215 7.0E-54 T 14-10-2018 AMIS_29240 9b23ff77e6a75bba6eb39e611d6d6841 336 SUPERFAMILY SSF81345 4 328 2.48E-69 T 14-10-2018 IPR037294 ABC transporter, BtuC-like AMIS_29240 9b23ff77e6a75bba6eb39e611d6d6841 336 Pfam PF01032 FecCD transport family 21 328 5.7E-81 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AMIS_29240 9b23ff77e6a75bba6eb39e611d6d6841 336 Gene3D G3DSA:1.10.3470.10 6 333 3.6E-87 T 14-10-2018 IPR037294 ABC transporter, BtuC-like AMIS_48520 c02620d2e63ae8d7dbc5311e2b4117ea 93 SUPERFAMILY SSF47090 40 81 4.32E-9 T 14-10-2018 IPR036365 PGBD-like superfamily AMIS_48520 c02620d2e63ae8d7dbc5311e2b4117ea 93 Pfam PF01471 Putative peptidoglycan binding domain 44 74 2.7E-9 T 14-10-2018 IPR002477 Peptidoglycan binding-like AMIS_48520 c02620d2e63ae8d7dbc5311e2b4117ea 93 Gene3D G3DSA:1.10.101.10 30 81 3.7E-8 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 AMIS_66040 840067d0bf16a1004b5e7fffa22c13af 404 Pfam PF01513 ATP-NAD kinase 57 262 1.1E-42 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 AMIS_66040 840067d0bf16a1004b5e7fffa22c13af 404 Gene3D G3DSA:2.60.200.30 123 255 6.8E-64 T 14-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 AMIS_66040 840067d0bf16a1004b5e7fffa22c13af 404 Gene3D G3DSA:3.40.50.10330 20 277 6.8E-64 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 AMIS_66040 840067d0bf16a1004b5e7fffa22c13af 404 Hamap MF_00361 NAD kinase [nadK]. 3 278 25.537 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 AMIS_66040 840067d0bf16a1004b5e7fffa22c13af 404 SUPERFAMILY SSF111331 17 277 1.06E-60 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily AMIS_66040 840067d0bf16a1004b5e7fffa22c13af 404 Gene3D G3DSA:3.40.630.30 297 385 3.2E-23 T 14-10-2018 AMIS_66040 840067d0bf16a1004b5e7fffa22c13af 404 SUPERFAMILY SSF55729 294 380 4.15E-23 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_66040 840067d0bf16a1004b5e7fffa22c13af 404 Pfam PF14542 GCN5-related N-acetyl-transferase 302 379 5.6E-23 T 14-10-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase AMIS_73630 c997c16dd54a20378505cff5b71e5a90 224 Pfam PF04402 Protein of unknown function (DUF541) 10 209 3.2E-28 T 14-10-2018 IPR007497 Protein of unknown function DUF541 AMIS_73630 c997c16dd54a20378505cff5b71e5a90 224 Gene3D G3DSA:3.30.110.170 10 209 8.8E-26 T 14-10-2018 AMIS_73630 c997c16dd54a20378505cff5b71e5a90 224 Gene3D G3DSA:3.30.70.2970 19 123 8.8E-26 T 14-10-2018 AMIS_73040 7550feddd318359401d9b50a38edaeff 131 Pfam PF02467 Transcription factor WhiB 34 97 2.6E-21 T 14-10-2018 IPR034768 WhiB-like iron-sulfur binding domain AMIS_73040 7550feddd318359401d9b50a38edaeff 131 Hamap MF_01479 Transcriptional regulator WhiB [whiB]. 1 105 15.875 T 14-10-2018 IPR003482 Transcription factor WhiB AMIS_28390 e8c1f997b0ea1b681f3728e199b0de87 261 Pfam PF07859 alpha/beta hydrolase fold 32 239 5.9E-23 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 AMIS_28390 e8c1f997b0ea1b681f3728e199b0de87 261 SUPERFAMILY SSF53474 5 239 3.88E-37 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_14430 56cd61f53690a1964f99714e32d69656 224 Gene3D G3DSA:3.60.10.10 5 223 1.4E-31 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AMIS_14430 56cd61f53690a1964f99714e32d69656 224 SUPERFAMILY SSF56219 3 222 4.71E-28 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AMIS_65000 48eb00ab5896aeef29afb90e0263c15c 238 Pfam PF04973 Nicotinamide mononucleotide transporter 26 219 4.5E-49 T 14-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 AMIS_65000 48eb00ab5896aeef29afb90e0263c15c 238 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 76 222 1.2E-11 T 14-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 AMIS_6530 517b6629638661ebb72f58a42da2c36a 120 Pfam PF05331 Protein of unknown function (DUF742) 8 120 9.9E-27 T 14-10-2018 IPR007995 Protein of unknown function DUF742 AMIS_43060 cf0f551cd634a4afc8ba207449ce5ccb 120 Pfam PF09862 Protein of unknown function (DUF2089) 12 116 1.2E-30 T 14-10-2018 IPR018658 Protein of unknown function DUF2089 AMIS_62450 299c7d18442dec11183d30a17d5833fe 311 SUPERFAMILY SSF142823 10 220 1.7E-25 T 14-10-2018 IPR036702 ComB-like superfamily GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 AMIS_62450 299c7d18442dec11183d30a17d5833fe 311 Pfam PF04029 2-phosphosulpholactate phosphatase 27 212 1.8E-12 T 14-10-2018 IPR005238 ComB-like GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 AMIS_62450 299c7d18442dec11183d30a17d5833fe 311 Gene3D G3DSA:3.90.1560.10 20 225 1.1E-23 T 14-10-2018 IPR036702 ComB-like superfamily GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 AMIS_40500 7bc5b1425f8f2a25e34c3b1bb7c25355 144 Gene3D G3DSA:3.40.630.30 19 139 6.8E-6 T 14-10-2018 AMIS_57190 e806c9880e51d38f850114f5486a6d30 290 SUPERFAMILY SSF51621 2 284 7.18E-69 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AMIS_57190 e806c9880e51d38f850114f5486a6d30 290 Pfam PF13714 Phosphoenolpyruvate phosphomutase 6 250 1.4E-40 T 14-10-2018 AMIS_57190 e806c9880e51d38f850114f5486a6d30 290 Gene3D G3DSA:3.20.20.60 1 287 6.5E-87 T 14-10-2018 AMIS_57190 e806c9880e51d38f850114f5486a6d30 290 ProSitePatterns PS00161 Isocitrate lyase signature. 117 122 - T 14-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 AMIS_16240 7488c7815494c725fb5886150871be7f 329 Pfam PF02628 Cytochrome oxidase assembly protein 27 200 2.8E-17 T 14-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 AMIS_80150 0e8c6a6d40544375488a64882db062b5 364 Gene3D G3DSA:3.90.1150.10 4 358 4.6E-109 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMIS_80150 0e8c6a6d40544375488a64882db062b5 364 Pfam PF00155 Aminotransferase class I and II 7 355 4.6E-38 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMIS_80150 0e8c6a6d40544375488a64882db062b5 364 Gene3D G3DSA:3.40.640.10 41 255 4.6E-109 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMIS_80150 0e8c6a6d40544375488a64882db062b5 364 SUPERFAMILY SSF53383 5 361 2.99E-90 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMIS_10210 8906265843d04676f83904f4c0347eba 402 Pfam PF00067 Cytochrome P450 265 366 3.7E-17 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_10210 8906265843d04676f83904f4c0347eba 402 PRINTS PR00463 E-class P450 group I signature 307 331 2.9E-7 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_10210 8906265843d04676f83904f4c0347eba 402 PRINTS PR00463 E-class P450 group I signature 267 285 2.9E-7 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_10210 8906265843d04676f83904f4c0347eba 402 Gene3D G3DSA:1.10.630.10 1 401 3.5E-136 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_10210 8906265843d04676f83904f4c0347eba 402 SUPERFAMILY SSF48264 12 387 3.41E-53 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMIS_76800 3c5c3da63c5eabc2c13815b1310596e1 168 Pfam PF04167 Protein of unknown function (DUF402) 56 120 1.2E-12 T 14-10-2018 IPR007295 Domain of unknown function DUF402 AMIS_76800 3c5c3da63c5eabc2c13815b1310596e1 168 SUPERFAMILY SSF159234 6 161 2.09E-20 T 14-10-2018 IPR035930 FomD-like superfamily AMIS_76800 3c5c3da63c5eabc2c13815b1310596e1 168 Gene3D G3DSA:2.40.380.10 46 165 6.1E-10 T 14-10-2018 IPR035930 FomD-like superfamily AMIS_56290 22ab3ba6d9480d68f6aa1c409c6f241f 294 SUPERFAMILY SSF54637 188 278 4.4E-18 T 14-10-2018 IPR029069 HotDog domain superfamily AMIS_56290 22ab3ba6d9480d68f6aa1c409c6f241f 294 Pfam PF01575 MaoC like domain 199 262 2.8E-13 T 14-10-2018 IPR002539 MaoC-like dehydratase domain AMIS_56290 22ab3ba6d9480d68f6aa1c409c6f241f 294 SUPERFAMILY SSF54637 66 153 6.86E-7 T 14-10-2018 IPR029069 HotDog domain superfamily AMIS_56290 22ab3ba6d9480d68f6aa1c409c6f241f 294 PRINTS PR01483 Fatty acid synthase signature 193 215 2.7E-7 T 14-10-2018 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 AMIS_56290 22ab3ba6d9480d68f6aa1c409c6f241f 294 PRINTS PR01483 Fatty acid synthase signature 215 236 2.7E-7 T 14-10-2018 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 AMIS_56290 22ab3ba6d9480d68f6aa1c409c6f241f 294 Gene3D G3DSA:3.10.129.10 34 291 3.1E-73 T 14-10-2018 AMIS_53480 e88802f9846fc6d0b93538f40c4cc025 318 Pfam PF00902 Sec-independent protein translocase protein (TatC) 27 240 1.1E-56 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AMIS_53480 e88802f9846fc6d0b93538f40c4cc025 318 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 124 150 1.9E-35 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AMIS_53480 e88802f9846fc6d0b93538f40c4cc025 318 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 24 51 1.9E-35 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AMIS_53480 e88802f9846fc6d0b93538f40c4cc025 318 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 106 124 1.9E-35 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AMIS_53480 e88802f9846fc6d0b93538f40c4cc025 318 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 174 202 1.9E-35 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AMIS_53480 e88802f9846fc6d0b93538f40c4cc025 318 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 16 259 14.54 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AMIS_53480 e88802f9846fc6d0b93538f40c4cc025 318 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 25 247 1.1E-56 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AMIS_57910 28919a3a433eab076ce486330d882f84 116 Gene3D G3DSA:3.10.450.50 4 115 1.1E-22 T 14-10-2018 AMIS_57910 28919a3a433eab076ce486330d882f84 116 Pfam PF12680 SnoaL-like domain 13 106 2.3E-12 T 14-10-2018 IPR037401 SnoaL-like domain AMIS_57910 28919a3a433eab076ce486330d882f84 116 SUPERFAMILY SSF54427 10 114 8.26E-19 T 14-10-2018 IPR032710 NTF2-like domain superfamily AMIS_56470 d8d31a77494634590ae739f446946ef7 291 SUPERFAMILY SSF53474 3 291 1.19E-38 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_56470 d8d31a77494634590ae739f446946ef7 291 Pfam PF12697 Alpha/beta hydrolase family 15 288 4.6E-16 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_65300 024036ebf70ace510aa4484fa850a417 143 Gene3D G3DSA:2.30.31.20 3 141 6.7E-48 T 14-10-2018 IPR038658 Sporulation-specific cell division protein SsgB superfamily AMIS_65300 024036ebf70ace510aa4484fa850a417 143 Pfam PF04686 Streptomyces sporulation and cell division protein, SsgA 27 126 1.5E-35 T 14-10-2018 IPR006776 Sporulation-specific cell division protein SsgB GO:0051301 AMIS_440 8b302082553216b79b2ef8f4fbbf4679 485 Pfam PF01098 Cell cycle protein 75 455 7.6E-74 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMIS_69070 8aec39a81aae965c5572e8998913f7db 224 Gene3D G3DSA:1.10.3720.10 9 222 3.8E-39 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_69070 8aec39a81aae965c5572e8998913f7db 224 SUPERFAMILY SSF161098 13 205 1.42E-34 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_69070 8aec39a81aae965c5572e8998913f7db 224 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 202 1.7E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_69070 8aec39a81aae965c5572e8998913f7db 224 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 114 1.2E-20 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 AMIS_67590 851c6a8fc314f3372a55a594938802f4 462 Pfam PF07690 Major Facilitator Superfamily 38 402 3.6E-30 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_67590 851c6a8fc314f3372a55a594938802f4 462 SUPERFAMILY SSF103473 13 458 5.1E-45 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_67590 851c6a8fc314f3372a55a594938802f4 462 Gene3D G3DSA:1.20.1250.20 16 448 2.5E-36 T 14-10-2018 AMIS_42050 e947a00ac0fedc90b6cab8a243854438 138 Gene3D G3DSA:1.10.10.10 2 138 1.3E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_42050 e947a00ac0fedc90b6cab8a243854438 138 SUPERFAMILY SSF46785 6 136 7.3E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_27090 e53f769a947deaa8a89e33c6acfaad9a 136 SUPERFAMILY SSF50249 4 123 1.68E-32 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMIS_27090 e53f769a947deaa8a89e33c6acfaad9a 136 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 54 118 2.6E-16 T 14-10-2018 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal AMIS_27090 e53f769a947deaa8a89e33c6acfaad9a 136 Pfam PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) 17 52 2.4E-12 T 14-10-2018 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal AMIS_64000 e048ee296be2b2a168fb33d273221158 44 SUPERFAMILY SSF88946 4 41 1.8E-5 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMIS_56970 dbc88808c22f7b681c5e0c957abab4df 298 SUPERFAMILY SSF74853 199 297 6.02E-11 T 14-10-2018 IPR036415 Lamin tail domain superfamily AMIS_56970 dbc88808c22f7b681c5e0c957abab4df 298 Gene3D G3DSA:2.40.50.90 27 178 4.1E-16 T 14-10-2018 IPR035437 SNase-like, OB-fold superfamily AMIS_56970 dbc88808c22f7b681c5e0c957abab4df 298 Pfam PF00932 Lamin Tail Domain 189 293 1.3E-14 T 14-10-2018 IPR001322 Lamin tail domain AMIS_56970 dbc88808c22f7b681c5e0c957abab4df 298 SUPERFAMILY SSF50199 29 174 6.54E-17 T 14-10-2018 AMIS_74300 8895699e4644ffd36a0aaa3cd6b94df6 205 SUPERFAMILY SSF144091 31 204 1.31E-25 T 14-10-2018 AMIS_74300 8895699e4644ffd36a0aaa3cd6b94df6 205 Gene3D G3DSA:1.20.1540.10 71 205 4.1E-18 T 14-10-2018 IPR035952 Rhomboid-like superfamily AMIS_74300 8895699e4644ffd36a0aaa3cd6b94df6 205 Pfam PF01694 Rhomboid family 71 204 2.0E-21 T 14-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AMIS_80190 7ad5f9e4bc7cf6c526810559fcde5458 488 SUPERFAMILY SSF50998 189 439 1.18E-6 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AMIS_80190 7ad5f9e4bc7cf6c526810559fcde5458 488 Pfam PF14269 Arylsulfotransferase (ASST) 100 379 4.7E-50 T 14-10-2018 IPR039535 Arylsulfotransferase-like AMIS_49900 a25b8745de2f0834f19fe1c76641c3a8 184 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 57 7.5E-16 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_49900 a25b8745de2f0834f19fe1c76641c3a8 184 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 2.4E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_49900 a25b8745de2f0834f19fe1c76641c3a8 184 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 2.4E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_49900 a25b8745de2f0834f19fe1c76641c3a8 184 ProSitePatterns PS01081 TetR-type HTH domain signature. 24 55 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMIS_49900 a25b8745de2f0834f19fe1c76641c3a8 184 Gene3D G3DSA:1.10.357.10 1 184 4.7E-42 T 14-10-2018 AMIS_49900 a25b8745de2f0834f19fe1c76641c3a8 184 SUPERFAMILY SSF46689 10 68 9.45E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_78930 98df7896e7355a3d5a1b4c650ea987e6 206 Pfam PF00881 Nitroreductase family 27 171 1.1E-15 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AMIS_78930 98df7896e7355a3d5a1b4c650ea987e6 206 SUPERFAMILY SSF55469 23 205 5.63E-37 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AMIS_78930 98df7896e7355a3d5a1b4c650ea987e6 206 Gene3D G3DSA:3.40.109.10 20 206 4.2E-27 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AMIS_34260 412fe8ea758015e6e0e76a684035275f 226 SUPERFAMILY SSF81301 4 48 5.45E-6 T 14-10-2018 AMIS_45060 14ebc1ff1428478b64caa4159f9ac16f 600 SUPERFAMILY SSF51161 461 552 2.49E-9 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily AMIS_38940 50f0b6545a53cad9068faa2899e777c5 219 Gene3D G3DSA:2.160.20.100 18 218 3.0E-35 T 14-10-2018 AMIS_38940 50f0b6545a53cad9068faa2899e777c5 219 Pfam PF13599 Pentapeptide repeats (9 copies) 111 180 6.6E-11 T 14-10-2018 IPR001646 Pentapeptide repeat AMIS_38940 50f0b6545a53cad9068faa2899e777c5 219 SUPERFAMILY SSF141571 39 209 6.47E-32 T 14-10-2018 AMIS_32380 b75df2ade9654a2f01455694fcb092ee 756 Pfam PF04389 Peptidase family M28 116 302 2.4E-36 T 14-10-2018 IPR007484 Peptidase M28 AMIS_32380 b75df2ade9654a2f01455694fcb092ee 756 SUPERFAMILY SSF53187 36 308 5.71E-48 T 14-10-2018 AMIS_32380 b75df2ade9654a2f01455694fcb092ee 756 Gene3D G3DSA:3.40.630.10 39 314 3.4E-56 T 14-10-2018 AMIS_53950 e2ff3a726743adc05bc6b62a238af5d0 340 SUPERFAMILY SSF51679 5 333 9.55E-69 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_53950 e2ff3a726743adc05bc6b62a238af5d0 340 Pfam PF00296 Luciferase-like monooxygenase 14 309 2.6E-77 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMIS_53950 e2ff3a726743adc05bc6b62a238af5d0 340 TIGRFAM TIGR03559 F420_Rv3520c: probable F420-dependent oxidoreductase, Rv3520c family 2 314 1.5E-116 T 14-10-2018 IPR019951 F420-dependent oxidoreductase-predicted, Rv3520c AMIS_53950 e2ff3a726743adc05bc6b62a238af5d0 340 Gene3D G3DSA:3.20.20.30 2 335 3.5E-80 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_52170 40ff17cd191fe52cd4480d70d63eeb21 349 Gene3D G3DSA:3.30.420.40 151 316 5.3E-29 T 14-10-2018 AMIS_52170 40ff17cd191fe52cd4480d70d63eeb21 349 ProSitePatterns PS01125 ROK family signature. 156 183 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AMIS_52170 40ff17cd191fe52cd4480d70d63eeb21 349 SUPERFAMILY SSF53067 15 343 7.35E-39 T 14-10-2018 AMIS_52170 40ff17cd191fe52cd4480d70d63eeb21 349 Pfam PF00480 ROK family 16 340 3.4E-41 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AMIS_52170 40ff17cd191fe52cd4480d70d63eeb21 349 Gene3D G3DSA:3.30.420.40 10 149 2.7E-20 T 14-10-2018 AMIS_77590 6cdd267f4e32bf5bccc1d40385b50d90 265 Pfam PF01040 UbiA prenyltransferase family 14 237 3.2E-22 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 AMIS_77590 6cdd267f4e32bf5bccc1d40385b50d90 265 Gene3D G3DSA:1.10.357.140 11 148 1.6E-7 T 14-10-2018 AMIS_42680 7f4d7dd751520e4e1bc1058238b40d19 337 Gene3D G3DSA:3.40.50.2000 158 325 3.7E-73 T 14-10-2018 AMIS_42680 7f4d7dd751520e4e1bc1058238b40d19 337 Gene3D G3DSA:3.40.50.2000 1 331 3.7E-73 T 14-10-2018 AMIS_42680 7f4d7dd751520e4e1bc1058238b40d19 337 SUPERFAMILY SSF53756 1 334 9.95E-51 T 14-10-2018 AMIS_42680 7f4d7dd751520e4e1bc1058238b40d19 337 Pfam PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 181 296 7.4E-8 T 14-10-2018 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0016758 Reactome: R-HSA-156588 AMIS_5860 066e9fc034d8e0f3deefa088a14f7ed8 135 SUPERFAMILY SSF54637 5 126 1.78E-27 T 14-10-2018 IPR029069 HotDog domain superfamily AMIS_5860 066e9fc034d8e0f3deefa088a14f7ed8 135 Gene3D G3DSA:3.10.129.10 4 133 1.9E-39 T 14-10-2018 AMIS_5860 066e9fc034d8e0f3deefa088a14f7ed8 135 Pfam PF01575 MaoC like domain 9 113 1.3E-26 T 14-10-2018 IPR002539 MaoC-like dehydratase domain AMIS_5860 066e9fc034d8e0f3deefa088a14f7ed8 135 PRINTS PR01483 Fatty acid synthase signature 18 40 4.2E-7 T 14-10-2018 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 AMIS_5860 066e9fc034d8e0f3deefa088a14f7ed8 135 PRINTS PR01483 Fatty acid synthase signature 40 61 4.2E-7 T 14-10-2018 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 AMIS_73510 806c2379eccfa031495a6860aaf6e884 182 SUPERFAMILY SSF102405 3 177 1.13E-57 T 14-10-2018 AMIS_73510 806c2379eccfa031495a6860aaf6e884 182 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 3 174 4.4E-59 T 14-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG AMIS_73510 806c2379eccfa031495a6860aaf6e884 182 Pfam PF03641 Possible lysine decarboxylase 46 173 1.3E-38 T 14-10-2018 IPR031100 LOG family AMIS_73510 806c2379eccfa031495a6860aaf6e884 182 Gene3D G3DSA:3.40.50.450 1 177 1.6E-66 T 14-10-2018 AMIS_14400 685164a4dbb00ed0a9af9695a996b5c4 150 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 4 145 7.1E-13 T 14-10-2018 IPR019587 Polyketide cyclase/dehydrase AMIS_14400 685164a4dbb00ed0a9af9695a996b5c4 150 SUPERFAMILY SSF55961 1 146 1.25E-27 T 14-10-2018 AMIS_14400 685164a4dbb00ed0a9af9695a996b5c4 150 Gene3D G3DSA:3.30.530.20 4 149 5.1E-31 T 14-10-2018 IPR023393 START-like domain superfamily AMIS_53790 ffb4bb921fe82ff544732e9a79a9d07b 90 Pfam PF04149 Domain of unknown function (DUF397) 32 82 6.0E-14 T 14-10-2018 IPR007278 Domain of unknown function DUF397 AMIS_75430 747214d64a14283c68ec750098d38ccd 269 Pfam PF03703 Bacterial PH domain 170 244 1.1E-11 T 14-10-2018 IPR005182 Domain of unknown function DUF304 AMIS_3820 00c2e3ecf0258fa57e619018ff082af9 478 Pfam PF00860 Permease family 28 432 5.1E-25 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 AMIS_50030 3edbb965269d8fc7fa9faeae053c86be 117 Pfam PF03965 Penicillinase repressor 4 99 1.3E-25 T 14-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 AMIS_50030 3edbb965269d8fc7fa9faeae053c86be 117 Gene3D G3DSA:1.10.10.10 1 68 1.9E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_50030 3edbb965269d8fc7fa9faeae053c86be 117 SUPERFAMILY SSF46785 3 105 1.78E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_17420 05d32f77e1c3cc5b58762053c527b22d 531 Gene3D G3DSA:3.50.50.60 6 521 1.7E-136 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_17420 05d32f77e1c3cc5b58762053c527b22d 531 SUPERFAMILY SSF56425 314 474 5.58E-29 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMIS_17420 05d32f77e1c3cc5b58762053c527b22d 531 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 1.8E-6 T 14-10-2018 AMIS_17420 05d32f77e1c3cc5b58762053c527b22d 531 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 485 500 1.8E-6 T 14-10-2018 AMIS_17420 05d32f77e1c3cc5b58762053c527b22d 531 Gene3D G3DSA:3.90.700.10 319 463 1.7E-136 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMIS_17420 05d32f77e1c3cc5b58762053c527b22d 531 Pfam PF00890 FAD binding domain 8 510 3.3E-76 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMIS_17420 05d32f77e1c3cc5b58762053c527b22d 531 SUPERFAMILY SSF51905 4 526 2.52E-43 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_31220 5ef042404d8e17dba484d652ccfcd3ef 178 SUPERFAMILY SSF58104 8 144 2.22E-20 T 14-10-2018 AMIS_31220 5ef042404d8e17dba484d652ccfcd3ef 178 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 85 168 9.7E-10 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_31220 5ef042404d8e17dba484d652ccfcd3ef 178 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 42 71 8.5E-6 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_31220 5ef042404d8e17dba484d652ccfcd3ef 178 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 123 150 8.5E-6 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMIS_31220 5ef042404d8e17dba484d652ccfcd3ef 178 Gene3D G3DSA:1.10.287.950 1 145 8.9E-22 T 14-10-2018 AMIS_25460 95515b2c496d6eb49c44996791c6b69a 157 SUPERFAMILY SSF46785 18 153 8.82E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_25460 95515b2c496d6eb49c44996791c6b69a 157 Gene3D G3DSA:1.10.10.10 3 152 5.8E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_58070 7fa085d9b0c5b001f85ba423b7e668a5 338 Pfam PF13480 Acetyltransferase (GNAT) domain 157 287 1.0E-22 T 14-10-2018 IPR038740 BioF2-like, acetyltransferase domain KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 AMIS_58070 7fa085d9b0c5b001f85ba423b7e668a5 338 Gene3D G3DSA:3.40.630.30 138 296 8.0E-25 T 14-10-2018 AMIS_58070 7fa085d9b0c5b001f85ba423b7e668a5 338 SUPERFAMILY SSF55729 145 300 2.84E-31 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_42750 4c4b5883d0985ac76d302093c3cbc968 401 PIRSF PIRSF036794 24 401 1.8E-64 T 14-10-2018 IPR014622 Uncharacterised conserved protein UCP036794, erythromycin esterase-type AMIS_42750 4c4b5883d0985ac76d302093c3cbc968 401 SUPERFAMILY SSF159501 36 400 1.15E-66 T 14-10-2018 AMIS_42750 4c4b5883d0985ac76d302093c3cbc968 401 Gene3D G3DSA:3.30.1870.10 68 142 4.6E-14 T 14-10-2018 AMIS_42750 4c4b5883d0985ac76d302093c3cbc968 401 Pfam PF05139 Erythromycin esterase 66 384 4.7E-51 T 14-10-2018 IPR007815 Erythromycin esterase GO:0046677 AMIS_22070 130dc66459b85a32a038b70665343c3e 139 SUPERFAMILY SSF50475 68 138 1.05E-5 T 14-10-2018 AMIS_22070 130dc66459b85a32a038b70665343c3e 139 TIGRFAM TIGR00026 hi_GC_TIGR00026: deazaflavin-dependent oxidoreductase, nitroreductase family 29 137 1.1E-33 T 14-10-2018 IPR004378 F420H(2)-dependent quinone reductase GO:0016491|GO:0055114 AMIS_22070 130dc66459b85a32a038b70665343c3e 139 Gene3D G3DSA:2.30.110.10 1 138 4.8E-47 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AMIS_22070 130dc66459b85a32a038b70665343c3e 139 Pfam PF04075 F420H(2)-dependent quinone reductase 12 137 2.9E-42 T 14-10-2018 IPR004378 F420H(2)-dependent quinone reductase GO:0016491|GO:0055114 AMIS_52060 ba1bfa8b7c4f9c664c5eac4e222bcbad 297 SUPERFAMILY SSF81296 27 204 1.54E-35 T 14-10-2018 IPR014756 Immunoglobulin E-set AMIS_52060 ba1bfa8b7c4f9c664c5eac4e222bcbad 297 Gene3D G3DSA:2.70.50.50 27 206 4.3E-43 T 14-10-2018 AMIS_52060 ba1bfa8b7c4f9c664c5eac4e222bcbad 297 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 27 202 4.0E-30 T 14-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal AMIS_30790 65966c06aff2ba6146ae3913d73a0bb5 129 Pfam PF16859 Bacterial transcriptional repressor C-terminal 13 116 7.2E-14 T 14-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AMIS_30790 65966c06aff2ba6146ae3913d73a0bb5 129 Gene3D G3DSA:1.10.357.10 2 127 3.2E-15 T 14-10-2018 AMIS_30790 65966c06aff2ba6146ae3913d73a0bb5 129 SUPERFAMILY SSF48498 13 122 2.33E-14 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMIS_62640 4b61262041ea2bc062f3913a9daf3c70 204 Gene3D G3DSA:2.60.40.290 1 63 1.1E-5 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 AMIS_29590 3f27cd2e6e87ef81317b2ff0b271d80b 283 Pfam PF08044 Domain of unknown function (DUF1707) 73 122 2.8E-13 T 14-10-2018 IPR012551 Protein of unknown function DUF1707 AMIS_29590 3f27cd2e6e87ef81317b2ff0b271d80b 283 Pfam PF09922 Cell wall-active antibiotics response 4TMS YvqF 148 212 2.1E-9 T 14-10-2018 IPR024425 Cell wall-active antibiotics response 4TMS YvqF AMIS_5350 4d63c8f03f85eb47e750803a4e35f325 213 Gene3D G3DSA:1.20.910.10 6 213 3.0E-55 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AMIS_5350 4d63c8f03f85eb47e750803a4e35f325 213 PRINTS PR00088 Haem oxygenase signature 7 32 4.6E-17 T 14-10-2018 IPR002051 Haem oxygenase GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|MetaCyc: PWY-5874|Reactome: R-HSA-189483|Reactome: R-HSA-917937 AMIS_5350 4d63c8f03f85eb47e750803a4e35f325 213 PRINTS PR00088 Haem oxygenase signature 42 67 4.6E-17 T 14-10-2018 IPR002051 Haem oxygenase GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|MetaCyc: PWY-5874|Reactome: R-HSA-189483|Reactome: R-HSA-917937 AMIS_5350 4d63c8f03f85eb47e750803a4e35f325 213 PRINTS PR00088 Haem oxygenase signature 67 92 4.6E-17 T 14-10-2018 IPR002051 Haem oxygenase GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|MetaCyc: PWY-5874|Reactome: R-HSA-189483|Reactome: R-HSA-917937 AMIS_5350 4d63c8f03f85eb47e750803a4e35f325 213 PRINTS PR00088 Haem oxygenase signature 120 141 4.6E-17 T 14-10-2018 IPR002051 Haem oxygenase GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|MetaCyc: PWY-5874|Reactome: R-HSA-189483|Reactome: R-HSA-917937 AMIS_5350 4d63c8f03f85eb47e750803a4e35f325 213 PIRSF PIRSF000343 3 213 4.6E-51 T 14-10-2018 IPR002051 Haem oxygenase GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|MetaCyc: PWY-5874|Reactome: R-HSA-189483|Reactome: R-HSA-917937 AMIS_5350 4d63c8f03f85eb47e750803a4e35f325 213 Pfam PF01126 Heme oxygenase 8 205 7.5E-42 T 14-10-2018 IPR016053 Haem oxygenase-like GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|MetaCyc: PWY-5874|Reactome: R-HSA-189483|Reactome: R-HSA-917937 AMIS_5350 4d63c8f03f85eb47e750803a4e35f325 213 SUPERFAMILY SSF48613 8 211 7.65E-47 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AMIS_19140 df83549c931bd24181945a8e9d0fad2b 538 SUPERFAMILY SSF56425 311 474 2.88E-33 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMIS_19140 df83549c931bd24181945a8e9d0fad2b 538 Gene3D G3DSA:3.50.50.60 3 526 5.1E-149 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_19140 df83549c931bd24181945a8e9d0fad2b 538 Gene3D G3DSA:3.90.700.10 319 463 5.1E-149 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMIS_19140 df83549c931bd24181945a8e9d0fad2b 538 Pfam PF00890 FAD binding domain 5 515 1.3E-82 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMIS_19140 df83549c931bd24181945a8e9d0fad2b 538 SUPERFAMILY SSF51905 3 535 4.97E-42 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_55860 dc5cb5d1e0335325474c32092906209e 349 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 100 250 1.9E-43 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain AMIS_55860 dc5cb5d1e0335325474c32092906209e 349 Gene3D G3DSA:1.10.260.150 68 334 2.5E-71 T 14-10-2018 AMIS_55860 dc5cb5d1e0335325474c32092906209e 349 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 100 250 5.1E-47 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain AMIS_36430 38631c253e54547d0a4c6d61a978755a 247 SUPERFAMILY SSF63817 103 246 1.92E-14 T 14-10-2018 IPR023365 Sortase domain superfamily AMIS_36430 38631c253e54547d0a4c6d61a978755a 247 Gene3D G3DSA:2.40.260.10 96 247 1.1E-25 T 14-10-2018 IPR023365 Sortase domain superfamily AMIS_36430 38631c253e54547d0a4c6d61a978755a 247 Pfam PF04203 Sortase family 105 245 2.4E-17 T 14-10-2018 IPR005754 Sortase family AMIS_26020 fd21fdba6affc5744b18aaf1275a8729 212 Pfam PF14273 Domain of unknown function (DUF4360) 33 212 2.8E-67 T 14-10-2018 IPR025649 Protein of unknown function DUF4360 AMIS_63840 d3f41b00f2ce09aef3131dcd523c7284 240 SMART SM00332 2 234 2.6E-23 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_63840 d3f41b00f2ce09aef3131dcd523c7284 240 Pfam PF13672 Protein phosphatase 2C 19 204 2.7E-13 T 14-10-2018 AMIS_63840 d3f41b00f2ce09aef3131dcd523c7284 240 Gene3D G3DSA:3.60.40.10 2 237 2.5E-66 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_63840 d3f41b00f2ce09aef3131dcd523c7284 240 SUPERFAMILY SSF81606 4 236 9.81E-68 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_63840 d3f41b00f2ce09aef3131dcd523c7284 240 SMART SM00331 11 236 2.0E-27 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AMIS_38930 ef348c7f40b9b85124c02ca12d152b06 245 SUPERFAMILY SSF51735 1 202 5.69E-27 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_38930 ef348c7f40b9b85124c02ca12d152b06 245 Pfam PF13460 NAD(P)H-binding 7 171 1.9E-7 T 14-10-2018 IPR016040 NAD(P)-binding domain AMIS_38930 ef348c7f40b9b85124c02ca12d152b06 245 Gene3D G3DSA:3.40.50.720 2 244 3.0E-25 T 14-10-2018 AMIS_23420 205631243043db0d4f83a4af0e8a328a 188 SUPERFAMILY SSF46689 2 66 4.29E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_23420 205631243043db0d4f83a4af0e8a328a 188 Gene3D G3DSA:1.10.357.10 5 188 1.6E-55 T 14-10-2018 AMIS_23420 205631243043db0d4f83a4af0e8a328a 188 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 57 4.2E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_27900 819a8d80d08149b9ac038ba35ce80d49 657 Gene3D G3DSA:1.10.3720.10 73 325 1.1E-66 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_27900 819a8d80d08149b9ac038ba35ce80d49 657 Gene3D G3DSA:1.10.3720.10 381 644 7.3E-61 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_27900 819a8d80d08149b9ac038ba35ce80d49 657 SUPERFAMILY SSF161098 389 657 3.38E-68 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_27900 819a8d80d08149b9ac038ba35ce80d49 657 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 108 313 9.4E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_27900 819a8d80d08149b9ac038ba35ce80d49 657 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 471 641 5.8E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_27900 819a8d80d08149b9ac038ba35ce80d49 657 SUPERFAMILY SSF161098 77 315 2.09E-56 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_50510 64b580eaccf6324a8a911d34c69c510a 307 SUPERFAMILY SSF56281 2 285 5.69E-53 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMIS_50510 64b580eaccf6324a8a911d34c69c510a 307 SMART SM00849 26 205 6.9E-27 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMIS_50510 64b580eaccf6324a8a911d34c69c510a 307 Gene3D G3DSA:3.60.15.10 2 229 6.2E-46 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMIS_50510 64b580eaccf6324a8a911d34c69c510a 307 Pfam PF00753 Metallo-beta-lactamase superfamily 23 205 2.3E-18 T 14-10-2018 IPR001279 Metallo-beta-lactamase AMIS_23390 97bb8c56d82704b50383bf9535172200 248 SUPERFAMILY SSF55874 117 237 2.87E-15 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_23390 97bb8c56d82704b50383bf9535172200 248 Gene3D G3DSA:3.30.565.10 114 238 6.1E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_23390 97bb8c56d82704b50383bf9535172200 248 Pfam PF07730 Histidine kinase 40 105 8.3E-20 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMIS_59500 a225cd3b831df696133fcca819c3b1e1 236 SUPERFAMILY SSF54593 126 235 2.2E-11 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_59500 a225cd3b831df696133fcca819c3b1e1 236 SUPERFAMILY SSF54593 1 117 8.39E-18 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_59500 a225cd3b831df696133fcca819c3b1e1 236 Gene3D G3DSA:3.10.180.10 120 236 5.1E-23 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_59500 a225cd3b831df696133fcca819c3b1e1 236 Gene3D G3DSA:3.10.180.10 3 119 4.4E-26 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_3630 c6a688bcf1c0ea702726066b9eac9a7e 471 Pfam PF12245 Bacterial Ig-like domain (group 3) 353 380 0.0041 T 14-10-2018 IPR022038 Bacterial Ig-like domain AMIS_3630 c6a688bcf1c0ea702726066b9eac9a7e 471 Pfam PF12245 Bacterial Ig-like domain (group 3) 177 199 0.69 T 14-10-2018 IPR022038 Bacterial Ig-like domain AMIS_3630 c6a688bcf1c0ea702726066b9eac9a7e 471 Pfam PF12245 Bacterial Ig-like domain (group 3) 449 466 0.028 T 14-10-2018 IPR022038 Bacterial Ig-like domain AMIS_3630 c6a688bcf1c0ea702726066b9eac9a7e 471 Gene3D G3DSA:2.60.40.10 290 386 2.9E-6 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_3630 c6a688bcf1c0ea702726066b9eac9a7e 471 Gene3D G3DSA:2.60.40.10 113 208 8.9E-6 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_3630 c6a688bcf1c0ea702726066b9eac9a7e 471 Gene3D G3DSA:2.60.40.10 387 469 5.7E-15 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_34680 40fe47afeb549a8556b26d3d1cd43163 219 SUPERFAMILY SSF160631 20 175 2.62E-15 T 14-10-2018 AMIS_34680 40fe47afeb549a8556b26d3d1cd43163 219 Pfam PF09346 SMI1 / KNR4 family (SUKH-1) 26 171 2.4E-14 T 14-10-2018 IPR018958 Knr4/Smi1-like domain AMIS_34680 40fe47afeb549a8556b26d3d1cd43163 219 SMART SM00860 26 173 3.3E-7 T 14-10-2018 IPR018958 Knr4/Smi1-like domain AMIS_51860 9278cbcd97215ad0fcfed066fab911a1 216 Pfam PF05949 Bacterial protein of unknown function (DUF881) 79 212 6.5E-23 T 14-10-2018 IPR010273 Protein of unknown function DUF881 AMIS_51860 9278cbcd97215ad0fcfed066fab911a1 216 Gene3D G3DSA:3.30.70.1880 76 216 5.3E-29 T 14-10-2018 AMIS_53030 14948cd6629519ba2092b404af2fa42f 198 Pfam PF16316 Domain of unknown function (DUF4956) 10 177 7.9E-58 T 14-10-2018 IPR032531 Protein of unknown function DUF4956 AMIS_11980 d08b0f2ae27b89793b3646f065dd73bc 208 PIRSF PIRSF037394 14 207 1.8E-62 T 14-10-2018 IPR017195 ABC-type thiamin-related transport system, permease component 1, predicted AMIS_11980 d08b0f2ae27b89793b3646f065dd73bc 208 Pfam PF09819 ABC-type cobalt transport system, permease component 25 144 2.5E-42 T 14-10-2018 IPR017195 ABC-type thiamin-related transport system, permease component 1, predicted AMIS_5240 bd4140b16feed2e4ef315a6d039cbf3f 151 SUPERFAMILY SSF53927 1 131 5.52E-28 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AMIS_5240 bd4140b16feed2e4ef315a6d039cbf3f 151 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 104 1.1E-17 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain AMIS_5240 bd4140b16feed2e4ef315a6d039cbf3f 151 Gene3D G3DSA:3.40.140.10 1 132 7.1E-32 T 14-10-2018 AMIS_76470 6e1ee87d1d6a0710642eef9ad703eb90 150 Pfam PF03963 Flagellar hook capping protein - N-terminal region 15 84 8.2E-20 T 14-10-2018 IPR005648 Flagellar hook capping protein AMIS_64740 853d74ac84fb4d7052e385113b66b878 97 Pfam PF07561 Domain of Unknown Function (DUF1540) 13 43 0.0012 T 14-10-2018 IPR011437 Domain of unknown function DUF1540 AMIS_64740 853d74ac84fb4d7052e385113b66b878 97 Pfam PF07561 Domain of Unknown Function (DUF1540) 62 94 5.3E-4 T 14-10-2018 IPR011437 Domain of unknown function DUF1540 AMIS_27380 623b07f0a22c47951161a12fba198488 317 Gene3D G3DSA:3.40.47.10 180 317 6.0E-31 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_27380 623b07f0a22c47951161a12fba198488 317 SUPERFAMILY SSF53901 14 315 5.08E-47 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_27380 623b07f0a22c47951161a12fba198488 317 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 231 315 1.1E-18 T 14-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AMIS_27380 623b07f0a22c47951161a12fba198488 317 Gene3D G3DSA:3.40.47.10 6 179 4.2E-56 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 AMIS_27380 623b07f0a22c47951161a12fba198488 317 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 14 315 9.6E-88 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AMIS_27380 623b07f0a22c47951161a12fba198488 317 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 117 194 2.2E-25 T 14-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AMIS_48860 4d85a8d9bf154cd32b69361f1120f883 322 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 50 4.2E-13 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_48860 4d85a8d9bf154cd32b69361f1120f883 322 Gene3D G3DSA:3.40.50.2300 77 299 3.3E-39 T 14-10-2018 AMIS_48860 4d85a8d9bf154cd32b69361f1120f883 322 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 14-10-2018 AMIS_48860 4d85a8d9bf154cd32b69361f1120f883 322 SMART SM00354 4 74 4.2E-12 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMIS_48860 4d85a8d9bf154cd32b69361f1120f883 322 Pfam PF13377 Periplasmic binding protein-like domain 167 301 6.2E-25 T 14-10-2018 AMIS_48860 4d85a8d9bf154cd32b69361f1120f883 322 SUPERFAMILY SSF53822 78 319 5.5E-35 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_48860 4d85a8d9bf154cd32b69361f1120f883 322 SUPERFAMILY SSF47413 6 60 7.31E-13 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMIS_48860 4d85a8d9bf154cd32b69361f1120f883 322 Gene3D G3DSA:1.10.260.40 2 61 1.5E-19 T 14-10-2018 AMIS_48860 4d85a8d9bf154cd32b69361f1120f883 322 Gene3D G3DSA:3.40.50.2300 157 285 3.3E-39 T 14-10-2018 AMIS_11930 ff51d3bac45067eb8e4b75b911f450d1 307 Gene3D G3DSA:3.20.20.220 4 307 4.0E-97 T 14-10-2018 AMIS_11930 ff51d3bac45067eb8e4b75b911f450d1 307 SUPERFAMILY SSF51730 8 277 3.34E-20 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like AMIS_42800 bd13b0ac7a2f73f8972afe6813bfd9f3 406 Gene3D G3DSA:3.40.50.1110 197 406 3.9E-26 T 14-10-2018 IPR036514 SGNH hydrolase superfamily AMIS_42800 bd13b0ac7a2f73f8972afe6813bfd9f3 406 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 207 393 1.0E-16 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain AMIS_42800 bd13b0ac7a2f73f8972afe6813bfd9f3 406 SUPERFAMILY SSF52266 205 405 6.66E-39 T 14-10-2018 AMIS_15630 17738e69e805e7c79b7fa05c60bb8a98 178 Pfam PF09534 Tryptophan-associated transmembrane protein (Trp_oprn_chp) 13 176 1.1E-33 T 14-10-2018 IPR019051 Trp biosynthesis associated, transmembrane protein, Oprn/Chp AMIS_77790 953b4d75acfedc89c45b4824967c2d60 342 SUPERFAMILY SSF53335 4 315 6.44E-37 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_77790 953b4d75acfedc89c45b4824967c2d60 342 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 106 252 2.4E-12 T 14-10-2018 IPR003788 Protein arginine methyltransferase NDUFAF7 Reactome: R-HSA-6799198 AMIS_77790 953b4d75acfedc89c45b4824967c2d60 342 Gene3D G3DSA:3.40.50.12710 2 323 9.8E-36 T 14-10-2018 IPR038375 Protein arginine methyltransferase NDUFAF7 superfamily Reactome: R-HSA-6799198 AMIS_77140 02b3ddf919f684adbfb8dc8654b95d8f 91 Pfam PF11662 Protein of unknown function (DUF3263) 18 89 5.3E-36 T 14-10-2018 IPR021678 Protein of unknown function DUF3263 AMIS_11650 8f89cb71f9fa85b891dac503d5b2ec4c 178 Pfam PF14024 Protein of unknown function (DUF4240) 1 131 2.5E-40 T 14-10-2018 IPR025334 Domain of unknown function (DUF4240 AMIS_40590 1d1c58225bb4d5dc9236df330c365eb2 320 PIRSF PIRSF002849 1 320 8.6E-129 T 14-10-2018 AMIS_40590 1d1c58225bb4d5dc9236df330c365eb2 320 SUPERFAMILY SSF52540 7 293 6.63E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_40590 1d1c58225bb4d5dc9236df330c365eb2 320 Gene3D G3DSA:1.10.8.300 209 316 6.8E-30 T 14-10-2018 AMIS_40590 1d1c58225bb4d5dc9236df330c365eb2 320 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 42 172 2.0E-63 T 14-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 AMIS_40590 1d1c58225bb4d5dc9236df330c365eb2 320 Gene3D G3DSA:3.40.50.300 1 202 2.1E-48 T 14-10-2018 AMIS_40590 1d1c58225bb4d5dc9236df330c365eb2 320 SMART SM00382 39 180 1.5E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_80950 b67d3a25e34b3b4682b93a95ef5b912d 510 PIRSF PIRSF010361 12 473 1.1E-95 T 14-10-2018 IPR016570 Uncharacterised conserved protein UCP010361, membrane AMIS_80950 b67d3a25e34b3b4682b93a95ef5b912d 510 Pfam PF09594 Glycosyltransferase family 87 150 364 9.6E-9 T 14-10-2018 IPR018584 Glycosyltransferase family 87 GO:0016758 AMIS_19020 af4acd6a3fc38ac806b7b29448ac4840 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 46 69 3.6E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_19020 af4acd6a3fc38ac806b7b29448ac4840 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 25 38 3.6E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_19020 af4acd6a3fc38ac806b7b29448ac4840 198 Gene3D G3DSA:1.10.357.10 6 198 1.4E-66 T 14-10-2018 AMIS_19020 af4acd6a3fc38ac806b7b29448ac4840 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 69 1.7E-14 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_19020 af4acd6a3fc38ac806b7b29448ac4840 198 SUPERFAMILY SSF46689 19 83 2.49E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_34820 fca68cf029bdae9586942e40739477c9 266 Pfam PF12730 ABC-2 family transporter protein 15 190 3.1E-6 T 14-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 AMIS_7720 89b875118837dbff0091866697799708 281 PIRSF PIRSF009160 1 281 6.3E-77 T 14-10-2018 IPR010539 Protein of unknown function UCP009160 AMIS_7720 89b875118837dbff0091866697799708 281 Pfam PF12811 Bax inhibitor 1 like 5 278 2.0E-85 T 14-10-2018 IPR010539 Protein of unknown function UCP009160 AMIS_73240 114e2bb6f03b560a980999a612feec31 991 Pfam PF03699 Uncharacterised protein family (UPF0182) 19 817 1.5E-264 T 14-10-2018 IPR005372 Uncharacterised protein family UPF0182 GO:0016021 AMIS_73240 114e2bb6f03b560a980999a612feec31 991 Hamap MF_01600 UPF0182 protein . 8 898 17.571 T 14-10-2018 IPR005372 Uncharacterised protein family UPF0182 GO:0016021 AMIS_37340 0dd05d5408ecf448f23f6bafa574916b 143 Gene3D G3DSA:1.10.101.10 3 75 8.8E-17 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 AMIS_37340 0dd05d5408ecf448f23f6bafa574916b 143 Pfam PF01471 Putative peptidoglycan binding domain 94 130 9.7E-13 T 14-10-2018 IPR002477 Peptidoglycan binding-like AMIS_37340 0dd05d5408ecf448f23f6bafa574916b 143 Pfam PF01471 Putative peptidoglycan binding domain 19 71 9.5E-11 T 14-10-2018 IPR002477 Peptidoglycan binding-like AMIS_37340 0dd05d5408ecf448f23f6bafa574916b 143 Gene3D G3DSA:1.10.101.10 76 138 9.5E-18 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 AMIS_37340 0dd05d5408ecf448f23f6bafa574916b 143 SUPERFAMILY SSF47090 4 72 6.91E-18 T 14-10-2018 IPR036365 PGBD-like superfamily AMIS_37340 0dd05d5408ecf448f23f6bafa574916b 143 SUPERFAMILY SSF47090 75 130 1.54E-15 T 14-10-2018 IPR036365 PGBD-like superfamily AMIS_47780 a7b5df4ba7aa449a9acc3b1b3cbacaa5 136 SUPERFAMILY SSF54593 9 134 1.65E-7 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_47780 a7b5df4ba7aa449a9acc3b1b3cbacaa5 136 Gene3D G3DSA:3.10.180.10 4 136 7.3E-24 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_41950 db8a1a4a2c8061a2abaaebaf19a28441 212 Gene3D G3DSA:3.40.50.150 19 202 4.2E-31 T 14-10-2018 AMIS_41950 db8a1a4a2c8061a2abaaebaf19a28441 212 Pfam PF13649 Methyltransferase domain 61 153 6.0E-12 T 14-10-2018 AMIS_41950 db8a1a4a2c8061a2abaaebaf19a28441 212 SUPERFAMILY SSF53335 21 198 1.46E-33 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_19260 437fea8767ef36811aad93632639bbb4 276 Gene3D G3DSA:3.90.226.10 1 259 1.6E-81 T 14-10-2018 AMIS_19260 437fea8767ef36811aad93632639bbb4 276 Pfam PF00378 Enoyl-CoA hydratase/isomerase 106 229 2.7E-26 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AMIS_19260 437fea8767ef36811aad93632639bbb4 276 Pfam PF00378 Enoyl-CoA hydratase/isomerase 8 69 7.7E-10 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AMIS_19260 437fea8767ef36811aad93632639bbb4 276 SUPERFAMILY SSF52096 2 272 3.81E-63 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMIS_62350 958b05793095e3982ab536cf9448e995 149 Pfam PF06103 Bacterial protein of unknown function (DUF948) 6 99 1.9E-25 T 14-10-2018 IPR009293 Uncharacterised protein family UPF0478 AMIS_53840 8d13def029b3d744f2e839f19e0b38ab 383 SUPERFAMILY SSF55874 272 369 4.82E-5 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_53840 8d13def029b3d744f2e839f19e0b38ab 383 Gene3D G3DSA:3.30.565.10 260 381 4.7E-22 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_53840 8d13def029b3d744f2e839f19e0b38ab 383 Pfam PF07730 Histidine kinase 186 250 1.2E-13 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMIS_11860 f6a88dd1cfc3356b77d52173a2787946 390 Pfam PF01757 Acyltransferase family 4 303 1.7E-20 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 AMIS_55270 7b0e256422448e19c41b009d2e2899c9 396 SUPERFAMILY SSF55874 275 373 1.71E-5 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_55270 7b0e256422448e19c41b009d2e2899c9 396 Gene3D G3DSA:3.30.565.10 268 394 9.8E-18 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_55270 7b0e256422448e19c41b009d2e2899c9 396 Pfam PF07730 Histidine kinase 185 249 5.9E-14 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMIS_30920 af679365df691536dc7046f4ca440877 183 Pfam PF14081 Domain of unknown function (DUF4262) 42 160 3.1E-37 T 14-10-2018 IPR025358 Protein of unknown function DUF4262 AMIS_76990 fbcf374dcb7684a8e280315e45fdc8b1 112 PRINTS PR00297 10kDa chaperonin signature 13 28 7.1E-12 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMIS_76990 fbcf374dcb7684a8e280315e45fdc8b1 112 PRINTS PR00297 10kDa chaperonin signature 37 58 7.1E-12 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMIS_76990 fbcf374dcb7684a8e280315e45fdc8b1 112 PRINTS PR00297 10kDa chaperonin signature 65 77 7.1E-12 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMIS_76990 fbcf374dcb7684a8e280315e45fdc8b1 112 PRINTS PR00297 10kDa chaperonin signature 86 99 7.1E-12 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMIS_76990 fbcf374dcb7684a8e280315e45fdc8b1 112 Pfam PF00166 Chaperonin 10 Kd subunit 12 98 4.2E-17 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMIS_76990 fbcf374dcb7684a8e280315e45fdc8b1 112 SMART SM00883 12 99 1.7E-22 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMIS_76990 fbcf374dcb7684a8e280315e45fdc8b1 112 Gene3D G3DSA:2.30.33.40 13 99 2.8E-13 T 14-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 AMIS_76990 fbcf374dcb7684a8e280315e45fdc8b1 112 SUPERFAMILY SSF50129 12 98 1.35E-16 T 14-10-2018 IPR011032 GroES-like superfamily AMIS_9960 c38c61bcd208c6ba2df853b8da26b727 183 SUPERFAMILY SSF55729 28 130 1.93E-8 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_78950 001f0bab3e546d295a20107c31a420af 323 Pfam PF13391 HNH endonuclease 205 264 5.6E-7 T 14-10-2018 IPR003615 HNH nuclease AMIS_43540 b5dd6a76ce278c53da79e5a73e47869a 101 Pfam PF13466 STAS domain 14 94 5.4E-18 T 14-10-2018 IPR002645 STAS domain AMIS_43540 b5dd6a76ce278c53da79e5a73e47869a 101 SUPERFAMILY SSF52091 10 99 5.89E-21 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_43540 b5dd6a76ce278c53da79e5a73e47869a 101 Gene3D G3DSA:3.30.750.24 3 101 8.9E-27 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_43540 b5dd6a76ce278c53da79e5a73e47869a 101 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 10 99 8.5E-21 T 14-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 AMIS_26450 fbb8af404a6a4bc7eb27fb48f77b7d6e 187 SUPERFAMILY SSF53474 5 128 1.04E-5 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_26450 fbb8af404a6a4bc7eb27fb48f77b7d6e 187 Gene3D G3DSA:3.40.50.1820 42 174 1.5E-9 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_38450 97fb353e1d944ff965916b6d8a67da3c 299 SUPERFAMILY SSF47240 31 219 3.25E-8 T 14-10-2018 IPR009078 Ferritin-like superfamily AMIS_38450 97fb353e1d944ff965916b6d8a67da3c 299 Pfam PF11583 P-aminobenzoate N-oxygenase AurF 7 281 4.2E-101 T 14-10-2018 IPR025859 P-aminobenzoate N-oxygenase AurF AMIS_66310 69d86a50d45931c69efe288010414b21 237 SUPERFAMILY SSF49785 108 236 5.1E-27 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_66310 69d86a50d45931c69efe288010414b21 237 Pfam PF03422 Carbohydrate binding module (family 6) 111 236 3.3E-30 T 14-10-2018 IPR005084 Carbohydrate binding module family 6 GO:0030246 AMIS_66310 69d86a50d45931c69efe288010414b21 237 Gene3D G3DSA:2.60.120.260 101 236 2.9E-34 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily AMIS_66310 69d86a50d45931c69efe288010414b21 237 SMART SM00606 103 237 4.8E-26 T 14-10-2018 IPR006584 Cellulose binding, type IV GO:0030246 AMIS_25780 bb5634b3bc497d8af6f7520f78b38042 417 Gene3D G3DSA:3.40.30.10 254 416 1.7E-46 T 14-10-2018 AMIS_25780 bb5634b3bc497d8af6f7520f78b38042 417 Pfam PF00578 AhpC/TSA family 283 394 3.1E-14 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AMIS_25780 bb5634b3bc497d8af6f7520f78b38042 417 SUPERFAMILY SSF52833 282 414 9.14E-32 T 14-10-2018 IPR036249 Thioredoxin-like superfamily AMIS_25780 bb5634b3bc497d8af6f7520f78b38042 417 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 10 210 6.2E-19 T 14-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 AMIS_42830 ed87b0d0fa4904c74d50e042d7a2d50c 42 SUPERFAMILY SSF54593 2 38 3.1E-5 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_41590 476bde6ed24cf6d04cab35a05170a520 96 SUPERFAMILY SSF56300 48 79 3.63E-9 T 14-10-2018 AMIS_41590 476bde6ed24cf6d04cab35a05170a520 96 Gene3D G3DSA:3.60.21.10 39 82 1.1E-8 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like AMIS_12810 813b9e61df69815116ebb0d5588e4f4c 485 SUPERFAMILY SSF52540 37 410 1.75E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_12810 813b9e61df69815116ebb0d5588e4f4c 485 Gene3D G3DSA:3.40.50.300 53 196 1.1E-8 T 14-10-2018 AMIS_12810 813b9e61df69815116ebb0d5588e4f4c 485 Gene3D G3DSA:3.40.50.300 265 475 2.8E-15 T 14-10-2018 AMIS_55930 3d4609ba81a65e78ae14cda7a4c4fbe3 221 SUPERFAMILY SSF53474 8 215 3.33E-33 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_55930 3d4609ba81a65e78ae14cda7a4c4fbe3 221 Gene3D G3DSA:3.40.50.1820 3 216 3.4E-59 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_55930 3d4609ba81a65e78ae14cda7a4c4fbe3 221 Pfam PF01738 Dienelactone hydrolase family 21 206 3.6E-7 T 14-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 AMIS_24260 023f9ea2b1bf9ca2acccbddb9e11a710 64 Pfam PF05532 CsbD-like 5 56 3.8E-16 T 14-10-2018 IPR008462 CsbD-like domain AMIS_24260 023f9ea2b1bf9ca2acccbddb9e11a710 64 Gene3D G3DSA:1.10.1470.10 4 64 6.9E-7 T 14-10-2018 IPR036629 YjbJ superfamily AMIS_24260 023f9ea2b1bf9ca2acccbddb9e11a710 64 SUPERFAMILY SSF69047 4 62 1.83E-9 T 14-10-2018 IPR036629 YjbJ superfamily AMIS_16510 e0a3aada951c4066e43efe4ab2bdb484 253 SUPERFAMILY SSF48452 9 116 5.06E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_16510 e0a3aada951c4066e43efe4ab2bdb484 253 Pfam PF13374 Tetratricopeptide repeat 129 162 2.8E-4 T 14-10-2018 AMIS_16510 e0a3aada951c4066e43efe4ab2bdb484 253 Gene3D G3DSA:1.25.40.10 19 251 3.3E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_18920 a965416eb9ed5434fc1fe0b595c92fda 438 Gene3D G3DSA:1.20.58.480 171 396 2.7E-6 T 14-10-2018 AMIS_24390 54d79ed33e9acedfb738d3033b9d831f 107 SUPERFAMILY SSF52091 11 98 2.22E-9 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_24390 54d79ed33e9acedfb738d3033b9d831f 107 Gene3D G3DSA:3.30.750.24 6 105 4.2E-11 T 14-10-2018 IPR036513 STAS domain superfamily AMIS_61150 71792ce5e6c95a584b193fd549ea1972 428 Pfam PF02378 Phosphotransferase system, EIIC 32 289 6.2E-14 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AMIS_61150 71792ce5e6c95a584b193fd549ea1972 428 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 21 358 8.8E-144 T 14-10-2018 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.197 AMIS_16760 c764ee38f4fd16e30a35b8b02ba65cdf 260 ProDom PD040491 SCO1799 RV1486C/MT1533 MB1522C CGL1536 ML1804 MAV321 76 260 3.0E-14 T 14-10-2018 AMIS_24020 c72c707fbd42d9918513dfebc6cefe53 474 SUPERFAMILY SSF55874 271 342 2.13E-5 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_24020 c72c707fbd42d9918513dfebc6cefe53 474 Pfam PF07730 Histidine kinase 194 259 2.2E-13 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMIS_59330 33c587d0bfac9599ff78b8ad95796ce3 684 Pfam PF13625 Helicase conserved C-terminal domain 489 612 2.3E-30 T 14-10-2018 IPR032830 Helicase XPB/Ssl2, N-terminal domain Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167246|Reactome: R-HSA-427413|Reactome: R-HSA-5696395|Reactome: R-HSA-5696400|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73863|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-77075 AMIS_65870 6282d3b2776aeb6d19b91db9ebddaf47 185 SUPERFAMILY SSF58104 33 175 2.75E-43 T 14-10-2018 AMIS_65870 6282d3b2776aeb6d19b91db9ebddaf47 185 Gene3D G3DSA:1.10.287.950 11 184 2.0E-42 T 14-10-2018 AMIS_65870 6282d3b2776aeb6d19b91db9ebddaf47 185 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 52 167 3.9E-30 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_65870 6282d3b2776aeb6d19b91db9ebddaf47 185 SMART SM00283 11 176 1.8E-4 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMIS_48010 2228a7dc037a385dae4d94a58a510a3e 246 Gene3D G3DSA:2.115.10.20 81 170 4.0E-7 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMIS_48010 2228a7dc037a385dae4d94a58a510a3e 246 Gene3D G3DSA:2.115.10.20 6 80 1.1E-7 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMIS_48010 2228a7dc037a385dae4d94a58a510a3e 246 SUPERFAMILY SSF75005 7 170 2.78E-11 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMIS_21970 5960acf4eae606c9af41666935dcc59c 250 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 6 182 7.1E-20 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain AMIS_21970 5960acf4eae606c9af41666935dcc59c 250 SUPERFAMILY SSF52266 3 191 2.83E-31 T 14-10-2018 AMIS_21970 5960acf4eae606c9af41666935dcc59c 250 Gene3D G3DSA:3.40.50.1110 1 192 7.5E-23 T 14-10-2018 IPR036514 SGNH hydrolase superfamily AMIS_8000 6657e829630c006913cecb20701d94d6 451 Pfam PF01425 Amidase 27 433 1.7E-79 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMIS_8000 6657e829630c006913cecb20701d94d6 451 SUPERFAMILY SSF75304 4 440 3.14E-101 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMIS_8000 6657e829630c006913cecb20701d94d6 451 Gene3D G3DSA:3.90.1300.10 3 450 1.9E-112 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMIS_73190 2077b8d16fb15ac8c085cc45ba754bc3 283 SUPERFAMILY SSF53335 26 236 1.33E-29 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_73190 2077b8d16fb15ac8c085cc45ba754bc3 283 Gene3D G3DSA:3.40.50.150 9 271 2.1E-69 T 14-10-2018 AMIS_38610 500109bee9ee467580566da4637fa226 325 Gene3D G3DSA:2.40.420.20 232 307 3.4E-10 T 14-10-2018 AMIS_12360 90c60ab8d12a0701b1a89001e2f96ac3 334 Gene3D G3DSA:3.20.20.150 2 324 7.1E-99 T 14-10-2018 AMIS_12360 90c60ab8d12a0701b1a89001e2f96ac3 334 SUPERFAMILY SSF51658 7 319 4.84E-57 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily AMIS_12360 90c60ab8d12a0701b1a89001e2f96ac3 334 Pfam PF07582 AP endonuclease family 2 C terminus 276 330 7.5E-25 T 14-10-2018 IPR011418 AP endonuclease, family 2, C-terminal AMIS_12360 90c60ab8d12a0701b1a89001e2f96ac3 334 Pfam PF01261 Xylose isomerase-like TIM barrel 22 251 2.4E-38 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AMIS_61240 773fc347aa582819e6446d7e037272c0 71 Pfam PF04149 Domain of unknown function (DUF397) 9 63 4.3E-24 T 14-10-2018 IPR007278 Domain of unknown function DUF397 AMIS_36550 3dda9c129435b4e6c451b8ad88aeb74d 404 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 124 348 2.0E-14 T 14-10-2018 IPR018713 Domain of unknown function DUF2236 AMIS_39210 b75c19032d0dd9011c0bf6bdd3b5c501 317 Pfam PF02517 CAAX protease self-immunity 153 242 8.9E-14 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 AMIS_1550 d06c330465083511d5b7c8410e878e41 70 SUPERFAMILY SSF143100 8 57 1.7E-7 T 14-10-2018 IPR035069 TTHA1013/TTHA0281-like AMIS_1550 d06c330465083511d5b7c8410e878e41 70 Gene3D G3DSA:3.30.160.250 6 69 5.8E-7 T 14-10-2018 AMIS_50330 537740ab0f1e3be2504d964534b2a4eb 256 TIGRFAM TIGR03856 F420_MSMEG_2906: probable F420-dependent oxidoreductase, MSMEG_2906 family 6 252 5.2E-120 T 14-10-2018 IPR022480 F420-dependent oxidoreductase, MSMEG2906 AMIS_50330 537740ab0f1e3be2504d964534b2a4eb 256 Pfam PF00296 Luciferase-like monooxygenase 7 217 3.3E-34 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMIS_50330 537740ab0f1e3be2504d964534b2a4eb 256 SUPERFAMILY SSF51679 3 220 1.09E-47 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_50330 537740ab0f1e3be2504d964534b2a4eb 256 Gene3D G3DSA:3.20.20.30 5 242 1.8E-48 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_51450 4920d53421d7706efdd6fe96432f9f00 198 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 12 32 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMIS_51450 4920d53421d7706efdd6fe96432f9f00 198 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 12 34 1.0E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMIS_51450 4920d53421d7706efdd6fe96432f9f00 198 Pfam PF07963 Prokaryotic N-terminal methylation motif 9 33 3.0E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMIS_51450 4920d53421d7706efdd6fe96432f9f00 198 Gene3D G3DSA:3.30.700.10 14 71 3.2E-5 T 14-10-2018 AMIS_1590 0e657df5511174d6d7348a6ef95fc542 548 Pfam PF11380 Stealth protein CR2, conserved region 2 234 340 9.2E-47 T 14-10-2018 IPR021520 Stealth protein CR2, conserved region 2 GO:0016772 AMIS_1590 0e657df5511174d6d7348a6ef95fc542 548 Pfam PF17103 Stealth protein CR4, conserved region 4 461 512 2.1E-17 T 14-10-2018 IPR031356 Stealth protein CR4, conserved region 4 AMIS_1590 0e657df5511174d6d7348a6ef95fc542 548 Pfam PF17101 Stealth protein CR1, conserved region 1 193 214 2.4E-12 T 14-10-2018 IPR031358 Stealth protein CR1, conserved region 1 AMIS_1590 0e657df5511174d6d7348a6ef95fc542 548 Pfam PF17102 Stealth protein CR3, conserved region 3 385 432 3.9E-16 T 14-10-2018 IPR031357 Stealth protein CR3, conserved region 3 AMIS_78290 086b3a44330bcd2f3d80efb1a970308f 99 Hamap MF_01479 Transcriptional regulator WhiB [whiB]. 3 74 18.022 T 14-10-2018 IPR003482 Transcription factor WhiB AMIS_78290 086b3a44330bcd2f3d80efb1a970308f 99 Pfam PF02467 Transcription factor WhiB 7 69 1.3E-23 T 14-10-2018 IPR034768 WhiB-like iron-sulfur binding domain AMIS_14600 8e30b1f0184d58ec26be85ce214a1c87 265 SUPERFAMILY SSF55729 1 123 3.54E-10 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_14600 8e30b1f0184d58ec26be85ce214a1c87 265 Pfam PF00583 Acetyltransferase (GNAT) family 38 122 3.7E-5 T 14-10-2018 IPR000182 GNAT domain AMIS_14600 8e30b1f0184d58ec26be85ce214a1c87 265 Gene3D G3DSA:3.40.630.30 2 134 2.0E-8 T 14-10-2018 AMIS_54900 aea4fb2323efc47fa886c719958624aa 252 SUPERFAMILY SSF52540 4 221 3.19E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_54900 aea4fb2323efc47fa886c719958624aa 252 Pfam PF00005 ABC transporter 24 165 2.3E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_54900 aea4fb2323efc47fa886c719958624aa 252 Gene3D G3DSA:3.40.50.300 2 249 3.6E-67 T 14-10-2018 AMIS_54900 aea4fb2323efc47fa886c719958624aa 252 SMART SM00382 33 216 4.8E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_54900 aea4fb2323efc47fa886c719958624aa 252 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_76510 57fd230a7d97b805baaba4fbf2f02161 131 SUPERFAMILY SSF52172 1 121 5.27E-32 T 14-10-2018 IPR011006 CheY-like superfamily AMIS_76510 57fd230a7d97b805baaba4fbf2f02161 131 Pfam PF00072 Response regulator receiver domain 7 119 6.8E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_76510 57fd230a7d97b805baaba4fbf2f02161 131 Gene3D G3DSA:3.40.50.12740 3 126 3.6E-32 T 14-10-2018 AMIS_76510 57fd230a7d97b805baaba4fbf2f02161 131 SMART SM00448 4 119 2.4E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMIS_62400 4ebbe7180154dd4a38fe89f243fbe52b 193 Gene3D G3DSA:1.10.10.10 8 123 1.7E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_62400 4ebbe7180154dd4a38fe89f243fbe52b 193 Pfam PF12840 Helix-turn-helix domain 14 72 3.1E-15 T 14-10-2018 AMIS_62400 4ebbe7180154dd4a38fe89f243fbe52b 193 SMART SM00418 13 108 1.2E-8 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMIS_62400 4ebbe7180154dd4a38fe89f243fbe52b 193 SUPERFAMILY SSF46785 14 91 2.38E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_66070 a6103442baf10f45b997877de4a89df3 326 SUPERFAMILY SSF53335 138 317 9.9E-38 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_66070 a6103442baf10f45b997877de4a89df3 326 Gene3D G3DSA:3.40.50.150 142 315 2.8E-36 T 14-10-2018 AMIS_66070 a6103442baf10f45b997877de4a89df3 326 Pfam PF08241 Methyltransferase domain 173 269 2.4E-23 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 AMIS_17050 1b6024ee33d7d6b634dba8082045d53e 164 SUPERFAMILY SSF55811 8 144 7.85E-33 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMIS_17050 1b6024ee33d7d6b634dba8082045d53e 164 Pfam PF00293 NUDIX domain 22 132 3.8E-20 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMIS_17050 1b6024ee33d7d6b634dba8082045d53e 164 Gene3D G3DSA:3.90.79.10 2 144 1.4E-37 T 14-10-2018 AMIS_51440 c3c7defcaec04c164f307a41d720a568 455 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 29 3.6E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMIS_51440 c3c7defcaec04c164f307a41d720a568 455 Pfam PF07963 Prokaryotic N-terminal methylation motif 7 28 2.1E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMIS_51440 c3c7defcaec04c164f307a41d720a568 455 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site AMIS_45080 fabc18db90fb16c9202aa7951222cd57 191 TIGRFAM TIGR04342 EXLDI: EXLDI protein 60 191 3.1E-21 T 14-10-2018 IPR027580 EXLDI protein AMIS_40650 ea0fa24918c39ee054d42b88619ddf33 378 Gene3D G3DSA:1.10.357.40 220 361 3.2E-31 T 14-10-2018 IPR037238 YbiA-like superfamily AMIS_40650 ea0fa24918c39ee054d42b88619ddf33 378 SUPERFAMILY SSF143990 231 357 1.44E-24 T 14-10-2018 IPR037238 YbiA-like superfamily AMIS_40650 ea0fa24918c39ee054d42b88619ddf33 378 Pfam PF08719 Domain of unknown function (DUF1768) 237 355 9.9E-14 T 14-10-2018 IPR012816 NADAR AMIS_71790 5d879e2c715a8ad972902a11f816c90c 202 Pfam PF13548 Domain of unknown function (DUF4126) 5 187 1.5E-54 T 14-10-2018 IPR025196 Domain of unknown function DUF4126 AMIS_76840 ab41c92144822630689b19875c9f9858 334 Pfam PF01384 Phosphate transporter family 22 323 2.5E-80 T 14-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 AMIS_18520 f8dac260d3e530a28ab96ade4de07a21 313 Pfam PF01925 Sulfite exporter TauE/SafE 7 244 3.4E-40 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AMIS_52560 06875320de964fe2a6a206d9ef3dc42a 181 Pfam PF03713 Domain of unknown function (DUF305) 33 178 2.6E-17 T 14-10-2018 IPR005183 Domain of unknown function DUF305 AMIS_52560 06875320de964fe2a6a206d9ef3dc42a 181 Gene3D G3DSA:1.20.1260.10 23 180 5.6E-20 T 14-10-2018 IPR012347 Ferritin-like AMIS_46970 a929ad74ecf084f9b6ac413d591b0df2 120 Pfam PF06993 Protein of unknown function (DUF1304) 10 117 1.1E-43 T 14-10-2018 IPR009732 Protein of unknown function DUF1304 AMIS_66700 b18a333c6a63c05864ebdd5ddb7372eb 207 Pfam PF06197 Protein of unknown function (DUF998) 22 202 7.2E-25 T 14-10-2018 IPR009339 Protein of unknown function DUF998 AMIS_11870 93054a97b53216b1363364a703544921 241 Pfam PF13349 Putative adhesin 94 238 1.6E-13 T 14-10-2018 IPR025164 Putative adhesin AMIS_26550 a7e44ea6d35726da2faa387a2a613ca3 422 Pfam PF04294 VanW like protein 242 370 7.8E-43 T 14-10-2018 IPR007391 Vancomycin resistance VanW AMIS_12840 0cfcba60edca37a82cfc6fb5b8786325 368 Gene3D G3DSA:3.40.50.300 116 360 4.3E-21 T 14-10-2018 AMIS_12840 0cfcba60edca37a82cfc6fb5b8786325 368 SUPERFAMILY SSF52540 118 364 3.42E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_18770 1d946e99e3792f738f106240a685b285 415 Pfam PF01594 AI-2E family transporter 22 343 2.6E-59 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like AMIS_56210 2022fdd1fcf21908d72732ceb4f7366a 251 SUPERFAMILY SSF160104 2 115 2.22E-21 T 14-10-2018 IPR023375 Acetoacetate decarboxylase domain superfamily KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 AMIS_56210 2022fdd1fcf21908d72732ceb4f7366a 251 Gene3D G3DSA:2.40.400.10 1 153 1.2E-21 T 14-10-2018 IPR023375 Acetoacetate decarboxylase domain superfamily KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 AMIS_56210 2022fdd1fcf21908d72732ceb4f7366a 251 Pfam PF06314 Acetoacetate decarboxylase (ADC) 47 112 1.3E-9 T 14-10-2018 IPR010451 Acetoacetate decarboxylase GO:0016829 KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 AMIS_72220 b3edd48179ceb8acf213f2684e3468ac 269 Pfam PF11303 Protein of unknown function (DUF3105) 125 243 2.8E-40 T 14-10-2018 IPR021454 Protein of unknown function DUF3105 AMIS_3060 0c1aaf11c959eea968161cae79a76fb2 1276 Pfam PF07179 SseB protein N-terminal domain 971 1070 3.6E-9 T 14-10-2018 IPR009839 SseB protein N-terminal domain AMIS_39030 6f523fdebaef18b6d6db827c69e468f4 538 Gene3D G3DSA:1.20.1250.20 267 499 1.8E-16 T 14-10-2018 AMIS_39030 6f523fdebaef18b6d6db827c69e468f4 538 SUPERFAMILY SSF103473 12 502 1.57E-62 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_39030 6f523fdebaef18b6d6db827c69e468f4 538 PRINTS PR01036 Tetracycline resistance protein TetB signature 20 44 3.2E-11 T 14-10-2018 AMIS_39030 6f523fdebaef18b6d6db827c69e468f4 538 PRINTS PR01036 Tetracycline resistance protein TetB signature 111 131 3.2E-11 T 14-10-2018 AMIS_39030 6f523fdebaef18b6d6db827c69e468f4 538 PRINTS PR01036 Tetracycline resistance protein TetB signature 141 165 3.2E-11 T 14-10-2018 AMIS_39030 6f523fdebaef18b6d6db827c69e468f4 538 PRINTS PR01036 Tetracycline resistance protein TetB signature 408 427 3.2E-11 T 14-10-2018 AMIS_39030 6f523fdebaef18b6d6db827c69e468f4 538 Gene3D G3DSA:1.20.1720.10 18 227 1.1E-43 T 14-10-2018 AMIS_39030 6f523fdebaef18b6d6db827c69e468f4 538 Pfam PF07690 Major Facilitator Superfamily 21 417 4.8E-48 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_77680 1fe889c7b5d89bde0b71754a45f0cf5a 196 Pfam PF14124 Domain of unknown function (DUF4291) 6 184 4.3E-71 T 14-10-2018 IPR025633 Protein of unknown function DUF4291 AMIS_48820 14473b56f946d076b099ab2e9805fff0 186 Pfam PF07681 DoxX 30 132 3.4E-5 T 14-10-2018 IPR032808 DoxX family AMIS_71280 251fda654b27094e8357960b363f58e1 434 Gene3D G3DSA:3.40.190.10 66 361 6.8E-60 T 14-10-2018 AMIS_71280 251fda654b27094e8357960b363f58e1 434 Pfam PF13416 Bacterial extracellular solute-binding protein 64 366 2.6E-26 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein AMIS_71280 251fda654b27094e8357960b363f58e1 434 Gene3D G3DSA:3.40.190.10 160 421 6.8E-60 T 14-10-2018 AMIS_71280 251fda654b27094e8357960b363f58e1 434 SUPERFAMILY SSF53850 47 431 1.99E-49 T 14-10-2018 AMIS_28200 4ab0c175e4acea3355240c137904a62b 512 TIGRFAM TIGR03773 anch_rpt_wall: putative ABC transporter-associated repeat protein 197 508 2.5E-77 T 14-10-2018 IPR022395 Conserved hypothetical protein CHP03773, ABC transporter-like AMIS_28200 4ab0c175e4acea3355240c137904a62b 512 TIGRFAM TIGR03769 P_ac_wall_RPT: actinobacterial surface-anchored protein domain 385 425 2.6E-14 T 14-10-2018 IPR022435 Surface-anchored repeat, actinobacteria AMIS_65520 58bf57a961aad8f6f82919bc86c96e8e 160 SUPERFAMILY SSF52218 4 157 4.66E-25 T 14-10-2018 IPR029039 Flavoprotein-like superfamily AMIS_65520 58bf57a961aad8f6f82919bc86c96e8e 160 Pfam PF03358 NADPH-dependent FMN reductase 4 141 1.8E-25 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AMIS_65520 58bf57a961aad8f6f82919bc86c96e8e 160 Gene3D G3DSA:3.40.50.360 2 159 1.6E-32 T 14-10-2018 IPR029039 Flavoprotein-like superfamily AMIS_33760 591714bc2637d475dda67373be545881 143 Gene3D G3DSA:3.10.180.10 7 123 6.4E-20 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_33760 591714bc2637d475dda67373be545881 143 SUPERFAMILY SSF54593 6 120 5.24E-23 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_33760 591714bc2637d475dda67373be545881 143 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 117 2.1E-5 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMIS_13050 8f90711036b2b0c8b0b7430082e65e3d 538 Gene3D G3DSA:3.20.20.300 14 397 2.7E-102 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 AMIS_13050 8f90711036b2b0c8b0b7430082e65e3d 538 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 62 378 7.4E-81 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMIS_13050 8f90711036b2b0c8b0b7430082e65e3d 538 SUPERFAMILY SSF51445 14 390 4.11E-81 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_67940 ffe11269fe35bf2e62efe5eea02fbac7 595 Gene3D G3DSA:3.40.50.300 325 560 9.1E-14 T 14-10-2018 AMIS_67940 ffe11269fe35bf2e62efe5eea02fbac7 595 SUPERFAMILY SSF52540 144 553 7.25E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_22110 666d129644ab470515c11c62b3c4861d 487 Pfam PF05598 Transposase domain (DUF772) 53 127 7.3E-18 T 14-10-2018 IPR008490 Transposase InsH, N-terminal AMIS_7660 d1bf10a2abfd28b89e0b03526ed7d715 233 Pfam PF13559 Domain of unknown function (DUF4129) 153 222 3.1E-12 T 14-10-2018 IPR025403 Domain of unknown function DUF4129 AMIS_6420 a8224837b75c76a51accb377e6f21a80 200 Gene3D G3DSA:3.20.20.70 4 68 1.0E-7 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_6420 a8224837b75c76a51accb377e6f21a80 200 Gene3D G3DSA:3.20.20.70 71 191 1.8E-21 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_6420 a8224837b75c76a51accb377e6f21a80 200 SUPERFAMILY SSF51391 6 184 3.14E-30 T 14-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AMIS_6420 a8224837b75c76a51accb377e6f21a80 200 Pfam PF02581 Thiamine monophosphate synthase 102 168 1.8E-11 T 14-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AMIS_6420 a8224837b75c76a51accb377e6f21a80 200 Pfam PF02581 Thiamine monophosphate synthase 8 57 7.0E-5 T 14-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AMIS_70550 8df5976e32f5b98a30eaba4498a88ec9 172 Gene3D G3DSA:1.20.120.450 5 171 8.3E-34 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes AMIS_70550 8df5976e32f5b98a30eaba4498a88ec9 172 SUPERFAMILY SSF109854 2 167 4.73E-42 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes AMIS_70550 8df5976e32f5b98a30eaba4498a88ec9 172 Pfam PF04978 Protein of unknown function (DUF664) 24 168 5.4E-44 T 14-10-2018 IPR007061 Protein of unknown function DUF664 AMIS_56170 09c79696cdd29c5635fab67715af0e21 324 SUPERFAMILY SSF53474 4 318 3.21E-39 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_56170 09c79696cdd29c5635fab67715af0e21 324 Gene3D G3DSA:3.40.50.1820 1 323 3.7E-92 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_56170 09c79696cdd29c5635fab67715af0e21 324 Pfam PF05448 Acetyl xylan esterase (AXE1) 1 319 2.5E-102 T 14-10-2018 IPR008391 Acetyl xylan esterase AMIS_40880 8c4e62dc84db9c13ac37b091d1f6f8be 343 Gene3D G3DSA:1.10.260.150 31 311 4.8E-49 T 14-10-2018 AMIS_40880 8c4e62dc84db9c13ac37b091d1f6f8be 343 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 60 250 8.7E-27 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain AMIS_43290 93d00c5205bcad5bc89142e023cefdd1 343 SUPERFAMILY SSF81345 11 333 2.88E-63 T 14-10-2018 IPR037294 ABC transporter, BtuC-like AMIS_43290 93d00c5205bcad5bc89142e023cefdd1 343 Pfam PF01032 FecCD transport family 29 334 3.6E-69 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AMIS_43290 93d00c5205bcad5bc89142e023cefdd1 343 Gene3D G3DSA:1.10.3470.10 14 341 1.2E-75 T 14-10-2018 IPR037294 ABC transporter, BtuC-like AMIS_26960 1d451c4f04c4fedbd5a30141a48adf09 229 SUPERFAMILY SSF88713 41 219 3.46E-38 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AMIS_26960 1d451c4f04c4fedbd5a30141a48adf09 229 Gene3D G3DSA:3.20.20.370 32 220 1.0E-39 T 14-10-2018 AMIS_26960 1d451c4f04c4fedbd5a30141a48adf09 229 Pfam PF01522 Polysaccharide deacetylase 41 159 6.1E-28 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMIS_35060 4ac33071e317d226af9c8e0a7e72ca0a 128 SUPERFAMILY SSF54593 4 121 2.95E-22 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_35060 4ac33071e317d226af9c8e0a7e72ca0a 128 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 117 2.2E-8 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMIS_35060 4ac33071e317d226af9c8e0a7e72ca0a 128 Gene3D G3DSA:3.10.180.10 1 121 1.2E-30 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_6260 8dab3e2c9ee1e42f1c221f4715320283 155 Pfam PF08044 Domain of unknown function (DUF1707) 17 69 2.0E-20 T 14-10-2018 IPR012551 Protein of unknown function DUF1707 AMIS_610 f933bdc1ce20cb1c85f980412bbe05cb 99 Gene3D G3DSA:3.30.70.1060 3 85 6.3E-8 T 14-10-2018 AMIS_610 f933bdc1ce20cb1c85f980412bbe05cb 99 Pfam PF03795 YCII-related domain 7 80 5.9E-11 T 14-10-2018 IPR005545 YCII-related AMIS_610 f933bdc1ce20cb1c85f980412bbe05cb 99 SUPERFAMILY SSF54909 4 86 4.56E-15 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel AMIS_57370 77808af5a0c4c46f80cdd1fdb616b629 368 SUPERFAMILY SSF49319 46 116 3.71E-5 T 14-10-2018 IPR027273 Neocarzinostatin-like AMIS_34210 02da44d911a88263990a8e1bf44cfed6 401 Pfam PF13350 Tyrosine phosphatase family 159 399 2.0E-65 T 14-10-2018 IPR026893 Tyrosine/serine-protein phosphatase IphP-type AMIS_34210 02da44d911a88263990a8e1bf44cfed6 401 SUPERFAMILY SSF52799 158 399 1.84E-52 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like AMIS_34210 02da44d911a88263990a8e1bf44cfed6 401 Gene3D G3DSA:3.90.190.10 159 400 1.5E-63 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like AMIS_1520 bc55101416ff42316c2ab4cb0b50fb58 403 Gene3D G3DSA:2.120.10.30 24 403 1.5E-94 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AMIS_1520 bc55101416ff42316c2ab4cb0b50fb58 403 Pfam PF02333 Phytase 295 399 2.9E-23 T 14-10-2018 IPR003431 Beta propeller phytase GO:0016158 KEGG: 00562+3.1.3.8|MetaCyc: PWY-4702 AMIS_1520 bc55101416ff42316c2ab4cb0b50fb58 403 Pfam PF02333 Phytase 5 148 3.7E-20 T 14-10-2018 IPR003431 Beta propeller phytase GO:0016158 KEGG: 00562+3.1.3.8|MetaCyc: PWY-4702 AMIS_1520 bc55101416ff42316c2ab4cb0b50fb58 403 SUPERFAMILY SSF50956 32 399 5.62E-53 T 14-10-2018 AMIS_54570 12e0de7a43a30f51f708f695b546e04b 437 Gene3D G3DSA:3.90.1200.10 199 437 3.2E-94 T 14-10-2018 AMIS_54570 12e0de7a43a30f51f708f695b546e04b 437 SUPERFAMILY SSF56112 130 401 5.1E-16 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily AMIS_1330 40915275f8c82f6dc1fc4085696a3b4d 421 Pfam PF13367 Protease prsW family 77 267 1.9E-38 T 14-10-2018 IPR026898 Protease PrsW GO:0008233 AMIS_68520 351841f47aa0898ca26e7e226d6bf2f9 165 Pfam PF11292 Protein of unknown function (DUF3093) 13 152 2.4E-43 T 14-10-2018 IPR021443 Protein of unknown function DUF3093 AMIS_77330 a66bc9e382fd770b8003592d7e9e222b 374 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 132 372 1.1E-59 T 14-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 AMIS_77330 a66bc9e382fd770b8003592d7e9e222b 374 SUPERFAMILY SSF75217 197 372 1.83E-40 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases AMIS_77330 a66bc9e382fd770b8003592d7e9e222b 374 Gene3D G3DSA:3.40.1280.10 206 373 1.4E-48 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMIS_77330 a66bc9e382fd770b8003592d7e9e222b 374 SMART SM00967 133 209 6.5E-17 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 AMIS_77330 a66bc9e382fd770b8003592d7e9e222b 374 SUPERFAMILY SSF55315 125 206 3.65E-16 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like AMIS_77330 a66bc9e382fd770b8003592d7e9e222b 374 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 133 208 1.3E-16 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 AMIS_77330 a66bc9e382fd770b8003592d7e9e222b 374 Gene3D G3DSA:3.30.1330.30 124 205 8.3E-9 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like AMIS_77330 a66bc9e382fd770b8003592d7e9e222b 374 Pfam PF00588 SpoU rRNA Methylase family 225 365 2.8E-34 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AMIS_33850 792ace3e737884cd22ef97624ae07de6 451 SUPERFAMILY SSF55486 78 401 1.03E-25 T 14-10-2018 AMIS_33240 8eeb301f160914e12e689fdc1a46e5d5 114 SUPERFAMILY SSF54909 1 111 3.49E-26 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel AMIS_33240 8eeb301f160914e12e689fdc1a46e5d5 114 Pfam PF03795 YCII-related domain 1 113 4.5E-23 T 14-10-2018 IPR005545 YCII-related AMIS_33240 8eeb301f160914e12e689fdc1a46e5d5 114 Gene3D G3DSA:3.30.70.1060 1 114 2.2E-34 T 14-10-2018 AMIS_51970 62aaa1dd8ff9d704f11288e5bc97c62b 421 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 136 150 3.2E-9 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AMIS_51970 62aaa1dd8ff9d704f11288e5bc97c62b 421 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 48 56 3.2E-9 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AMIS_51970 62aaa1dd8ff9d704f11288e5bc97c62b 421 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 78 89 3.2E-9 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AMIS_51970 62aaa1dd8ff9d704f11288e5bc97c62b 421 Gene3D G3DSA:3.40.50.1820 26 251 1.3E-17 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_51970 62aaa1dd8ff9d704f11288e5bc97c62b 421 Pfam PF00561 alpha/beta hydrolase fold 46 191 2.1E-12 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_51970 62aaa1dd8ff9d704f11288e5bc97c62b 421 SUPERFAMILY SSF53474 28 413 3.85E-26 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_51970 62aaa1dd8ff9d704f11288e5bc97c62b 421 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 115 145 - T 14-10-2018 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 AMIS_17260 94f853e6ddd34d60dd19682f353b0907 238 Pfam PF04138 GtrA-like protein 14 131 3.6E-6 T 14-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 AMIS_49090 7f01bd8cb50c9b1b9b15e6e983b31cca 188 Gene3D G3DSA:1.10.357.10 2 187 9.5E-48 T 14-10-2018 AMIS_49090 7f01bd8cb50c9b1b9b15e6e983b31cca 188 SUPERFAMILY SSF46689 8 71 3.94E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMIS_49090 7f01bd8cb50c9b1b9b15e6e983b31cca 188 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 60 2.2E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMIS_63700 232c99bca1e1787a1144f38637b7a841 356 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 8 194 4.9E-30 T 14-10-2018 AMIS_63700 232c99bca1e1787a1144f38637b7a841 356 Gene3D G3DSA:3.40.50.150 5 201 7.0E-49 T 14-10-2018 AMIS_63700 232c99bca1e1787a1144f38637b7a841 356 SUPERFAMILY SSF53335 2 191 2.11E-29 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_46460 6d9406f664a34bc952ef18eede8c4482 275 Pfam PF04116 Fatty acid hydroxylase superfamily 83 216 1.1E-26 T 14-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 AMIS_22750 41fe16fcaf2a50eed724436ec40bd46e 195 Pfam PF13599 Pentapeptide repeats (9 copies) 59 130 1.9E-8 T 14-10-2018 IPR001646 Pentapeptide repeat AMIS_22750 41fe16fcaf2a50eed724436ec40bd46e 195 Pfam PF00805 Pentapeptide repeats (8 copies) 27 55 1.0E-4 T 14-10-2018 IPR001646 Pentapeptide repeat AMIS_22750 41fe16fcaf2a50eed724436ec40bd46e 195 Pfam PF00805 Pentapeptide repeats (8 copies) 137 163 3.9E-7 T 14-10-2018 IPR001646 Pentapeptide repeat AMIS_22750 41fe16fcaf2a50eed724436ec40bd46e 195 Gene3D G3DSA:2.160.20.100 20 195 5.1E-42 T 14-10-2018 AMIS_22750 41fe16fcaf2a50eed724436ec40bd46e 195 SUPERFAMILY SSF141571 24 193 6.93E-36 T 14-10-2018 AMIS_65790 b813e764646f8f46c182b6d7d573693d 400 SUPERFAMILY SSF48208 113 338 8.26E-8 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AMIS_34740 5ef5396a4f6c5d580f4a5ecaabe797bc 335 Gene3D G3DSA:1.10.10.10 9 100 6.4E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_34740 5ef5396a4f6c5d580f4a5ecaabe797bc 335 SUPERFAMILY SSF46785 12 91 6.64E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_34740 5ef5396a4f6c5d580f4a5ecaabe797bc 335 PIRSF PIRSF005739 6 330 2.1E-29 T 14-10-2018 IPR016461 O-methyltransferase COMT-type GO:0008168 AMIS_34740 5ef5396a4f6c5d580f4a5ecaabe797bc 335 Gene3D G3DSA:3.40.50.150 108 332 7.6E-60 T 14-10-2018 AMIS_34740 5ef5396a4f6c5d580f4a5ecaabe797bc 335 Pfam PF00891 O-methyltransferase 109 313 1.2E-33 T 14-10-2018 IPR001077 O-methyltransferase, family 2 GO:0008171 AMIS_34740 5ef5396a4f6c5d580f4a5ecaabe797bc 335 SUPERFAMILY SSF53335 110 320 1.41E-39 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_39160 15ccb8c941d3ac4003154de223ed8e39 423 Gene3D G3DSA:3.40.710.10 57 420 7.0E-78 T 14-10-2018 AMIS_39160 15ccb8c941d3ac4003154de223ed8e39 423 Pfam PF00144 Beta-lactamase 80 416 1.3E-59 T 14-10-2018 IPR001466 Beta-lactamase-related AMIS_39160 15ccb8c941d3ac4003154de223ed8e39 423 SUPERFAMILY SSF56601 19 419 9.9E-74 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMIS_69700 a2b7dc379217a76983e2b0d7ced6e7d9 229 Pfam PF01988 VIT family 17 224 6.9E-63 T 14-10-2018 IPR008217 Ccc1 family AMIS_43490 4deb41dab89abb914954d35377b81750 97 TIGRFAM TIGR02157 PA_CoA_Oxy2: phenylacetate-CoA oxygenase, PaaH subunit 8 97 2.8E-45 T 14-10-2018 IPR009359 Phenylacetic acid degradation B AMIS_43490 4deb41dab89abb914954d35377b81750 97 Gene3D G3DSA:3.10.20.520 2 67 3.4E-31 T 14-10-2018 IPR038693 Phenylacetyl-CoA epoxidase, subunit B AMIS_43490 4deb41dab89abb914954d35377b81750 97 Pfam PF06243 Phenylacetic acid degradation B 7 93 3.0E-38 T 14-10-2018 IPR009359 Phenylacetic acid degradation B AMIS_43490 4deb41dab89abb914954d35377b81750 97 PIRSF PIRSF030200 1 97 8.1E-45 T 14-10-2018 IPR009359 Phenylacetic acid degradation B AMIS_9630 3de7178932eee86491158a37449357ea 136 Pfam PF03780 Asp23 family, cell envelope-related function 24 133 1.6E-16 T 14-10-2018 IPR005531 Alkaline shock protein Asp23 AMIS_47090 119dbad2addef7ec7a5a22f4d9d27f2f 242 Pfam PF01061 ABC-2 type transporter 3 200 1.6E-8 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 AMIS_47090 119dbad2addef7ec7a5a22f4d9d27f2f 242 PIRSF PIRSF006648 1 240 3.0E-17 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AMIS_51760 a29915cb232e1cc13ba9455aa9420107 189 Pfam PF13628 Domain of unknown function (DUF4142) 38 172 2.3E-24 T 14-10-2018 IPR025419 Domain of unknown function DUF4142 AMIS_11080 d32dcf566605f5e76ebecbcfe9ff7670 398 Pfam PF06245 Protein of unknown function (DUF1015) 19 395 2.3E-46 T 14-10-2018 IPR008323 Uncharacterised conserved protein UCP033563 AMIS_33620 9a08c3b791d1f8ecfefac284e922a34d 409 SMART SM00387 319 409 8.2E-5 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_33620 9a08c3b791d1f8ecfefac284e922a34d 409 Pfam PF07730 Histidine kinase 219 285 5.6E-12 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMIS_33620 9a08c3b791d1f8ecfefac284e922a34d 409 SUPERFAMILY SSF55874 314 406 8.21E-15 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_33620 9a08c3b791d1f8ecfefac284e922a34d 409 Gene3D G3DSA:3.30.565.10 292 407 7.1E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_33620 9a08c3b791d1f8ecfefac284e922a34d 409 Pfam PF13796 Putative sensor 18 190 4.8E-27 T 14-10-2018 IPR025828 Putative sensor domain AMIS_1090 201ec0641d8b244dfc4661fd8b522720 400 Gene3D G3DSA:3.40.50.300 153 397 4.6E-25 T 14-10-2018 AMIS_1090 201ec0641d8b244dfc4661fd8b522720 400 SUPERFAMILY SSF52540 153 397 1.55E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_32050 5cbb1aa90621bf3942d69cc6b3c402f0 150 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 19 101 3.0E-6 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AMIS_32050 5cbb1aa90621bf3942d69cc6b3c402f0 150 Gene3D G3DSA:2.30.110.10 13 125 8.6E-14 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AMIS_32050 5cbb1aa90621bf3942d69cc6b3c402f0 150 SUPERFAMILY SSF50475 16 107 2.95E-15 T 14-10-2018 AMIS_48060 ea3af0049118df29562de7412ce48477 75 SUPERFAMILY SSF54593 32 73 1.43E-5 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_48060 ea3af0049118df29562de7412ce48477 75 Gene3D G3DSA:3.10.180.10 34 75 6.7E-9 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_52720 ff80fe4613501a350d478085ea9dfb64 428 Pfam PF13515 Fusaric acid resistance protein-like 287 412 2.7E-19 T 14-10-2018 AMIS_44270 3daeb2786707977621dd99a0bf33749a 554 Gene3D G3DSA:1.20.1730.10 33 498 1.6E-32 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily AMIS_14710 30bc307beb7072461bb1b629cc829bdc 225 Gene3D G3DSA:3.40.50.880 2 225 1.4E-44 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_14710 30bc307beb7072461bb1b629cc829bdc 225 SUPERFAMILY SSF52317 3 223 3.99E-39 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_14710 30bc307beb7072461bb1b629cc829bdc 225 Pfam PF00117 Glutamine amidotransferase class-I 27 209 1.3E-13 T 14-10-2018 IPR017926 Glutamine amidotransferase AMIS_51280 c8e211380e52d69730529014ed50578c 303 SUPERFAMILY SSF161098 26 303 5.61E-66 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_51280 c8e211380e52d69730529014ed50578c 303 Gene3D G3DSA:1.10.3720.10 20 290 3.5E-57 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_51280 c8e211380e52d69730529014ed50578c 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 296 1.8E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_14240 74a75852474c48ba5f38727a6c48dc5f 536 SUPERFAMILY SSF81342 20 295 1.38E-61 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AMIS_14240 74a75852474c48ba5f38727a6c48dc5f 536 Gene3D G3DSA:1.20.810.10 6 446 1.5E-87 T 14-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 AMIS_14240 74a75852474c48ba5f38727a6c48dc5f 536 Pfam PF13631 Cytochrome b(N-terminal)/b6/petB 118 291 2.2E-60 T 14-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 AMIS_34110 8b8909c40b1c4bb489fe3cb192aa408b 141 Gene3D G3DSA:3.10.450.50 2 128 1.2E-40 T 14-10-2018 AMIS_34110 8b8909c40b1c4bb489fe3cb192aa408b 141 SUPERFAMILY SSF54427 3 127 5.39E-25 T 14-10-2018 IPR032710 NTF2-like domain superfamily AMIS_34110 8b8909c40b1c4bb489fe3cb192aa408b 141 Pfam PF12680 SnoaL-like domain 9 117 9.2E-15 T 14-10-2018 IPR037401 SnoaL-like domain AMIS_31510 428c7442b45c0a975496ab582104e607 119 SUPERFAMILY SSF55874 14 95 1.7E-10 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_31510 428c7442b45c0a975496ab582104e607 119 Pfam PF13581 Histidine kinase-like ATPase domain 12 96 2.1E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMIS_31510 428c7442b45c0a975496ab582104e607 119 Gene3D G3DSA:3.30.565.10 1 101 2.3E-22 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_41540 bc49b4c0beb5dcb4840b141fb33a3c0e 311 Pfam PF12006 Protein of unknown function (DUF3500) 53 309 4.8E-41 T 14-10-2018 IPR021889 Protein of unknown function DUF3500 AMIS_57280 756cb1417f7f3b09284f9fd944cb6e2a 230 Gene3D G3DSA:3.40.1500.20 9 228 1.4E-29 T 14-10-2018 AMIS_26700 161400db001aeffb558d6ac77d9c380c 212 SUPERFAMILY SSF54909 32 98 1.21E-6 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel AMIS_26700 161400db001aeffb558d6ac77d9c380c 212 Pfam PF03992 Antibiotic biosynthesis monooxygenase 144 181 1.9E-4 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain AMIS_26700 161400db001aeffb558d6ac77d9c380c 212 Pfam PF03992 Antibiotic biosynthesis monooxygenase 32 84 6.7E-5 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain AMIS_26700 161400db001aeffb558d6ac77d9c380c 212 SUPERFAMILY SSF54909 128 182 8.05E-7 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel AMIS_26700 161400db001aeffb558d6ac77d9c380c 212 Gene3D G3DSA:3.30.70.100 112 212 1.3E-22 T 14-10-2018 AMIS_26700 161400db001aeffb558d6ac77d9c380c 212 Gene3D G3DSA:3.30.70.100 9 110 2.3E-18 T 14-10-2018 AMIS_8630 50cfbb4aee43e2427ebf9f5844fa8e35 423 Pfam PF01590 GAF domain 127 217 7.5E-5 T 14-10-2018 IPR003018 GAF domain GO:0005515 AMIS_8630 50cfbb4aee43e2427ebf9f5844fa8e35 423 Gene3D G3DSA:3.30.450.40 36 220 8.2E-47 T 14-10-2018 IPR029016 GAF-like domain superfamily AMIS_15910 1d7bbaad6cf3f5d7ee4f5bd0f7598678 331 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 4 321 1.5E-116 T 14-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 AMIS_15910 1d7bbaad6cf3f5d7ee4f5bd0f7598678 331 Pfam PF03741 Integral membrane protein TerC family 70 274 1.1E-51 T 14-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 AMIS_79530 4712aefb8826b103d68b5f0390be193f 255 Pfam PF12730 ABC-2 family transporter protein 14 190 2.6E-8 T 14-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 AMIS_50140 5d2a6bed3122a9b290ca245fa79cf039 400 SUPERFAMILY SSF53756 1 392 3.93E-93 T 14-10-2018 AMIS_50140 5d2a6bed3122a9b290ca245fa79cf039 400 Gene3D G3DSA:3.40.50.2000 5 390 8.3E-122 T 14-10-2018 AMIS_50140 5d2a6bed3122a9b290ca245fa79cf039 400 Gene3D G3DSA:3.40.50.2000 194 373 8.3E-122 T 14-10-2018 AMIS_50140 5d2a6bed3122a9b290ca245fa79cf039 400 Pfam PF13439 Glycosyltransferase Family 4 21 198 1.2E-33 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AMIS_50140 5d2a6bed3122a9b290ca245fa79cf039 400 Pfam PF00534 Glycosyl transferases group 1 214 367 3.2E-36 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 AMIS_19090 3dde8685d072695ab802f029bd1294b2 121 SUPERFAMILY SSF46785 7 111 1.26E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_19090 3dde8685d072695ab802f029bd1294b2 121 Gene3D G3DSA:1.10.10.10 2 117 1.3E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_19090 3dde8685d072695ab802f029bd1294b2 121 Pfam PF01638 HxlR-like helix-turn-helix 22 104 4.2E-18 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type AMIS_34910 d6dd25004de936ccc363d940d9d8b0bd 305 SUPERFAMILY SSF103481 178 280 1.7E-16 T 14-10-2018 AMIS_34910 d6dd25004de936ccc363d940d9d8b0bd 305 Pfam PF00892 EamA-like transporter family 144 276 4.2E-23 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMIS_34910 d6dd25004de936ccc363d940d9d8b0bd 305 Pfam PF00892 EamA-like transporter family 6 134 2.4E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMIS_34910 d6dd25004de936ccc363d940d9d8b0bd 305 SUPERFAMILY SSF103481 47 137 1.18E-14 T 14-10-2018 AMIS_78710 f30c98298bef6507f8a307a933174442 148 SMART SM00960 20 110 2.8E-21 T 14-10-2018 IPR004942 Roadblock/LAMTOR2 domain AMIS_78710 f30c98298bef6507f8a307a933174442 148 Pfam PF03259 Roadblock/LC7 domain 20 110 1.0E-14 T 14-10-2018 IPR004942 Roadblock/LAMTOR2 domain AMIS_78710 f30c98298bef6507f8a307a933174442 148 SUPERFAMILY SSF103196 15 135 2.27E-25 T 14-10-2018 AMIS_78710 f30c98298bef6507f8a307a933174442 148 Gene3D G3DSA:3.30.450.30 16 138 1.8E-33 T 14-10-2018 AMIS_39930 9fc6e3ebff1cddc05fb1511227e48b5b 346 SUPERFAMILY SSF50494 123 337 2.12E-19 T 14-10-2018 IPR009003 Peptidase S1, PA clan AMIS_39930 9fc6e3ebff1cddc05fb1511227e48b5b 346 Pfam PF13365 Trypsin-like peptidase domain 138 309 1.1E-13 T 14-10-2018 AMIS_39930 9fc6e3ebff1cddc05fb1511227e48b5b 346 Gene3D G3DSA:2.40.10.10 273 336 2.9E-5 T 14-10-2018 AMIS_32070 96f49d5ca345d8d70b798234039a8ef9 142 SMART SM00862 57 130 3.9E-10 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_32070 96f49d5ca345d8d70b798234039a8ef9 142 Pfam PF00486 Transcriptional regulatory protein, C terminal 59 130 8.7E-13 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMIS_32070 96f49d5ca345d8d70b798234039a8ef9 142 SUPERFAMILY SSF46894 52 132 1.22E-14 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMIS_32070 96f49d5ca345d8d70b798234039a8ef9 142 Gene3D G3DSA:1.10.10.10 48 139 1.1E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_38050 8d2bc8f28478819971c748b64c497d7c 373 SUPERFAMILY SSF51679 4 370 1.88E-61 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_38050 8d2bc8f28478819971c748b64c497d7c 373 Pfam PF00296 Luciferase-like monooxygenase 172 341 1.3E-12 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMIS_38050 8d2bc8f28478819971c748b64c497d7c 373 Pfam PF00296 Luciferase-like monooxygenase 18 117 2.7E-25 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMIS_47560 f54157e00126ff39a764b4bcb10ebc11 702 Gene3D G3DSA:3.40.50.300 597 702 8.7E-7 T 14-10-2018 AMIS_47560 f54157e00126ff39a764b4bcb10ebc11 702 SUPERFAMILY SSF52540 193 701 7.67E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_47560 f54157e00126ff39a764b4bcb10ebc11 702 Gene3D G3DSA:3.40.50.300 497 591 1.5E-7 T 14-10-2018 AMIS_47560 f54157e00126ff39a764b4bcb10ebc11 702 Gene3D G3DSA:3.40.50.300 190 290 1.8E-7 T 14-10-2018 AMIS_54660 ab7361b19fd29a6bf1fd9c4a0bd3285b 89 Gene3D G3DSA:3.40.1620.40 1 54 1.5E-17 T 14-10-2018 AMIS_54660 ab7361b19fd29a6bf1fd9c4a0bd3285b 89 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 69 6.2E-17 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AMIS_54660 ab7361b19fd29a6bf1fd9c4a0bd3285b 89 SUPERFAMILY SSF143120 1 80 1.4E-16 T 14-10-2018 IPR036165 YefM-like superfamily AMIS_54660 ab7361b19fd29a6bf1fd9c4a0bd3285b 89 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 3 55 3.2E-10 T 14-10-2018 AMIS_16230 4e792342a22459eb846e772a19b61ac9 299 SUPERFAMILY SSF56059 91 275 1.85E-6 T 14-10-2018 AMIS_49430 31f2703d978948e1d84523530a9917f3 600 Pfam PF02652 L-lactate permease 21 288 1.5E-71 T 14-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 AMIS_49430 31f2703d978948e1d84523530a9917f3 600 Pfam PF02652 L-lactate permease 354 590 1.8E-59 T 14-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 AMIS_1890 57aa8122fbcd2568943818e9a1fd27db 269 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 65 246 1.7E-37 T 14-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 AMIS_1890 57aa8122fbcd2568943818e9a1fd27db 269 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 22 55 2.9E-8 T 14-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 AMIS_30420 c2aebd3b76d567a7f69d80ff7a5a7ef5 374 Pfam PF07730 Histidine kinase 173 238 1.6E-18 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMIS_30420 c2aebd3b76d567a7f69d80ff7a5a7ef5 374 Gene3D G3DSA:3.30.565.10 250 372 1.6E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_30420 c2aebd3b76d567a7f69d80ff7a5a7ef5 374 SUPERFAMILY SSF55874 261 370 3.17E-11 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_56820 69f875cab14a63d734c47dab084fde27 422 SUPERFAMILY SSF49503 336 412 8.43E-6 T 14-10-2018 IPR008972 Cupredoxin AMIS_8500 fb918d5108edd7f6762147661cbbc09d 381 Pfam PF13439 Glycosyltransferase Family 4 21 181 1.1E-15 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AMIS_8500 fb918d5108edd7f6762147661cbbc09d 381 Gene3D G3DSA:3.40.50.2000 19 370 4.0E-51 T 14-10-2018 AMIS_8500 fb918d5108edd7f6762147661cbbc09d 381 Pfam PF00534 Glycosyl transferases group 1 203 356 1.5E-19 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 AMIS_8500 fb918d5108edd7f6762147661cbbc09d 381 Gene3D G3DSA:3.40.50.2000 180 360 4.0E-51 T 14-10-2018 AMIS_8500 fb918d5108edd7f6762147661cbbc09d 381 SUPERFAMILY SSF53756 8 377 1.15E-57 T 14-10-2018 AMIS_6620 6866718718deaab3643e7ba38daf35ee 500 SUPERFAMILY SSF140459 13 109 9.94E-5 T 14-10-2018 AMIS_6620 6866718718deaab3643e7ba38daf35ee 500 Pfam PF06259 Alpha/beta hydrolase 255 417 5.4E-32 T 14-10-2018 IPR010427 Protein of unknown function DUF1023 AMIS_60870 99db33eabab0c269452c9e3c306861cc 281 Pfam PF02517 CAAX protease self-immunity 174 271 1.3E-15 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 AMIS_10820 46ada9e5999f1f15679db74b56d10566 311 Pfam PF02104 SURF1 family 19 233 3.9E-30 T 14-10-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMIS_7030 a0a966cae9b09de9c29cb640ab51d2dd 409 Pfam PF04024 PspC domain 1 56 7.8E-15 T 14-10-2018 IPR007168 Phage shock protein, PspC, N-terminal AMIS_7030 a0a966cae9b09de9c29cb640ab51d2dd 409 Gene3D G3DSA:3.30.565.10 270 402 1.7E-18 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_7030 a0a966cae9b09de9c29cb640ab51d2dd 409 SUPERFAMILY SSF55874 288 396 1.31E-12 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_49360 90ef32b6ffb36c4ceea29cdaa08f9978 218 SUPERFAMILY SSF46955 34 91 4.03E-8 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily AMIS_49360 90ef32b6ffb36c4ceea29cdaa08f9978 218 Pfam PF13411 MerR HTH family regulatory protein 34 86 8.6E-6 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMIS_9620 30cc87f60dbf4c77ed8aeb9e5a94ada2 140 Pfam PF02675 S-adenosylmethionine decarboxylase 18 108 1.7E-14 T 14-10-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 AMIS_9620 30cc87f60dbf4c77ed8aeb9e5a94ada2 140 Gene3D G3DSA:3.60.90.10 1 127 3.8E-18 T 14-10-2018 AMIS_9620 30cc87f60dbf4c77ed8aeb9e5a94ada2 140 SUPERFAMILY SSF56276 17 94 9.81E-12 T 14-10-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 AMIS_15740 1b678b5129f7378d95f84a51623e54b7 292 SUPERFAMILY SSF54637 11 120 6.22E-40 T 14-10-2018 IPR029069 HotDog domain superfamily AMIS_15740 1b678b5129f7378d95f84a51623e54b7 292 Pfam PF13622 Thioesterase-like superfamily 36 286 3.5E-57 T 14-10-2018 AMIS_15740 1b678b5129f7378d95f84a51623e54b7 292 SUPERFAMILY SSF54637 122 288 2.01E-44 T 14-10-2018 IPR029069 HotDog domain superfamily AMIS_15740 1b678b5129f7378d95f84a51623e54b7 292 Gene3D G3DSA:3.10.129.90 7 290 1.8E-102 T 14-10-2018 AMIS_34960 3069c671f68721e249b8470b1eef9dde 612 Pfam PF00723 Glycosyl hydrolases family 15 233 600 1.4E-54 T 14-10-2018 IPR011613 GH15-like domain Reactome: R-HSA-70221 AMIS_34960 3069c671f68721e249b8470b1eef9dde 612 SUPERFAMILY SSF48208 208 607 2.43E-97 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AMIS_26600 44d41ca161d007fe55f0fc48a5cb27ff 157 Gene3D G3DSA:1.10.490.110 2 125 5.9E-5 T 14-10-2018 AMIS_26600 44d41ca161d007fe55f0fc48a5cb27ff 157 Pfam PF10025 Uncharacterized conserved protein (DUF2267) 6 102 4.7E-11 T 14-10-2018 IPR018727 Protein of unknown function DUF2267 AMIS_16500 7263aece596648416592aff955579c0e 81 Pfam PF10944 Protein of unknown function (DUF2630) 2 81 1.4E-34 T 14-10-2018 IPR020311 Uncharacterised protein family, Rv0898c AMIS_16500 7263aece596648416592aff955579c0e 81 ProDom PD062385 SCO7189 RV0898C/MT0921.1 MB0922C 1 81 1.0E-15 T 14-10-2018 IPR020311 Uncharacterised protein family, Rv0898c AMIS_59720 beae292bea4bf5c5136b52448e08bdc1 157 Pfam PF12158 Protein of unknown function (DUF3592) 11 139 1.2E-11 T 14-10-2018 IPR021994 Protein of unknown function DUF3592 AMIS_74840 4f515514a650e885902586354217de21 412 Pfam PF02653 Branched-chain amino acid transport system / permease component 109 385 1.5E-42 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 AMIS_24670 772fe52a177563092d7ae1d0ce82b5b3 245 SUPERFAMILY SSF53474 3 233 1.54E-28 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_24670 772fe52a177563092d7ae1d0ce82b5b3 245 Gene3D G3DSA:3.40.50.1820 1 234 3.9E-36 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_24670 772fe52a177563092d7ae1d0ce82b5b3 245 Pfam PF12697 Alpha/beta hydrolase family 7 227 1.8E-18 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_79980 c28f9021f35760a85795d6e7e95e9a6c 266 Pfam PF06276 Ferric iron reductase FhuF-like transporter 84 207 1.4E-6 T 14-10-2018 IPR022770 Ferric iron reductase FhuF domain AMIS_35920 d92382bb07fb0241ba36f662ef89ad6f 352 SUPERFAMILY SSF51120 232 315 3.84E-7 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_35920 d92382bb07fb0241ba36f662ef89ad6f 352 PRINTS PR00313 NodO calcium binding signature 188 196 2.1E-7 T 14-10-2018 AMIS_35920 d92382bb07fb0241ba36f662ef89ad6f 352 PRINTS PR00313 NodO calcium binding signature 197 205 2.1E-7 T 14-10-2018 AMIS_35920 d92382bb07fb0241ba36f662ef89ad6f 352 PRINTS PR00313 NodO calcium binding signature 233 242 2.1E-7 T 14-10-2018 AMIS_35920 d92382bb07fb0241ba36f662ef89ad6f 352 PRINTS PR00313 NodO calcium binding signature 176 187 2.1E-7 T 14-10-2018 AMIS_35920 d92382bb07fb0241ba36f662ef89ad6f 352 Gene3D G3DSA:2.150.10.10 269 350 1.7E-8 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_35920 d92382bb07fb0241ba36f662ef89ad6f 352 Gene3D G3DSA:2.150.10.10 139 194 8.5E-9 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_35920 d92382bb07fb0241ba36f662ef89ad6f 352 Gene3D G3DSA:2.150.10.10 195 268 3.6E-7 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_35920 d92382bb07fb0241ba36f662ef89ad6f 352 SUPERFAMILY SSF51120 124 255 1.57E-13 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AMIS_36850 040a05f251a815a4ba156d021751f725 181 Pfam PF01814 Hemerythrin HHE cation binding domain 4 119 6.5E-14 T 14-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 AMIS_36850 040a05f251a815a4ba156d021751f725 181 Gene3D G3DSA:1.20.120.520 2 138 2.2E-13 T 14-10-2018 AMIS_51060 77621a0ed4d0a8489941ccfd167e3ee5 108 Pfam PF03992 Antibiotic biosynthesis monooxygenase 2 77 1.7E-20 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain AMIS_51060 77621a0ed4d0a8489941ccfd167e3ee5 108 Gene3D G3DSA:3.30.70.100 1 95 2.0E-22 T 14-10-2018 AMIS_51060 77621a0ed4d0a8489941ccfd167e3ee5 108 SUPERFAMILY SSF54909 2 90 3.72E-28 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel AMIS_20340 851a233eb6f8bcfa6f885cb06a248370 279 SUPERFAMILY SSF88659 16 75 8.28E-7 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMIS_20340 851a233eb6f8bcfa6f885cb06a248370 279 Pfam PF04545 Sigma-70, region 4 30 73 2.8E-6 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 AMIS_45390 c8173eaf026b5ae2fd46d80431db1a75 135 Pfam PF04237 YjbR 17 115 5.7E-8 T 14-10-2018 IPR007351 Uncharacterised protein YjbR AMIS_51120 e6c310cf562702745c5002f67575c9af 319 Gene3D G3DSA:1.10.3720.10 32 309 1.9E-59 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_51120 e6c310cf562702745c5002f67575c9af 319 SUPERFAMILY SSF161098 41 319 3.36E-65 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_51120 e6c310cf562702745c5002f67575c9af 319 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 138 307 8.8E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_70900 753de5912f68448da7d08cfbd8fe2603 65 SUPERFAMILY SSF50249 1 53 3.43E-5 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMIS_39060 65fecf8098a7178da9e720c52f8be61e 283 Pfam PF02096 60Kd inner membrane protein 42 260 2.6E-54 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AMIS_39060 65fecf8098a7178da9e720c52f8be61e 283 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 41 260 9.8E-57 T 14-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMIS_53050 2cc973dde10a55152d4aa53ac4547b0f 594 Pfam PF14262 Carbohydrate-binding domain-containing protein Cthe_2159 90 347 3.8E-81 T 14-10-2018 IPR025584 Carbohydrate-binding domain-containing protein Cthe_2159 AMIS_53050 2cc973dde10a55152d4aa53ac4547b0f 594 Pfam PF14262 Carbohydrate-binding domain-containing protein Cthe_2159 333 399 8.1E-8 T 14-10-2018 IPR025584 Carbohydrate-binding domain-containing protein Cthe_2159 AMIS_69330 2c6529c97292bdcf2e72fb5aa2cfa8f6 138 Pfam PF10722 Putative bacterial sensory transduction regulator 7 130 2.3E-21 T 14-10-2018 IPR019660 Putative sensory transduction regulator YbjN AMIS_32490 1949de95ad40be13deeb416b1b86283e 429 Gene3D G3DSA:3.40.190.10 152 420 9.1E-118 T 14-10-2018 AMIS_32490 1949de95ad40be13deeb416b1b86283e 429 Gene3D G3DSA:3.40.190.10 53 387 9.1E-118 T 14-10-2018 AMIS_32490 1949de95ad40be13deeb416b1b86283e 429 SUPERFAMILY SSF53850 21 428 7.61E-67 T 14-10-2018 AMIS_32490 1949de95ad40be13deeb416b1b86283e 429 Pfam PF13416 Bacterial extracellular solute-binding protein 56 365 1.7E-33 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein AMIS_54440 56f1a14b2af21bee618e06148a140267 354 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 106 255 2.8E-42 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain AMIS_54440 56f1a14b2af21bee618e06148a140267 354 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 106 255 8.8E-37 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain AMIS_54440 56f1a14b2af21bee618e06148a140267 354 Gene3D G3DSA:1.10.260.150 68 342 1.0E-68 T 14-10-2018 AMIS_73270 16996fc13e203c0a47aea1eea2217e1d 198 Gene3D G3DSA:3.90.550.10 19 144 4.6E-5 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_73270 16996fc13e203c0a47aea1eea2217e1d 198 SUPERFAMILY SSF53448 19 131 3.21E-5 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_17530 28c18370cd8f2a96a1096757468ec5cc 98 Gene3D G3DSA:3.10.20.30 1 98 1.9E-13 T 14-10-2018 IPR012675 Beta-grasp domain superfamily AMIS_69380 34ea2f664034877c7f0649ed08ebe611 407 Pfam PF06224 Winged helix DNA-binding domain 40 378 1.7E-73 T 14-10-2018 IPR009351 Protein of unknown function DUF1006 AMIS_48230 ddb57e5392eba1a1fd3f7f8dc406164d 262 Pfam PF03883 Peroxide stress protein YaaA 2 240 5.0E-35 T 14-10-2018 IPR005583 Peroxide stress protein YaaA AMIS_57790 1e574d40939c417974ef8cb5bbdf9dc6 192 SUPERFAMILY SSF53448 1 183 2.7E-31 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_57790 1e574d40939c417974ef8cb5bbdf9dc6 192 Pfam PF12804 MobA-like NTP transferase domain 5 158 8.5E-35 T 14-10-2018 IPR025877 MobA-like NTP transferase AMIS_57790 1e574d40939c417974ef8cb5bbdf9dc6 192 Gene3D G3DSA:3.90.550.10 1 190 1.8E-48 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMIS_52830 f668bfcf1e37afad413f2c6305d6faf6 115 SUPERFAMILY SSF142906 1 115 2.49E-26 T 14-10-2018 IPR038056 YjbR-like superfamily AMIS_52830 f668bfcf1e37afad413f2c6305d6faf6 115 Pfam PF04237 YjbR 11 103 1.4E-17 T 14-10-2018 IPR007351 Uncharacterised protein YjbR AMIS_52830 f668bfcf1e37afad413f2c6305d6faf6 115 Gene3D G3DSA:3.90.1150.30 1 115 2.9E-24 T 14-10-2018 IPR038056 YjbR-like superfamily AMIS_70400 d7f9f04ab67783f2e52c51e46a45d127 142 Pfam PF04138 GtrA-like protein 9 121 3.6E-18 T 14-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 AMIS_27240 f0a68c185186084ace9f2fd7e8e532ae 42 TIGRFAM TIGR03969 mycofactocin: mycofactocin precursor 21 42 2.1E-12 T 14-10-2018 IPR023988 Mycofactocin AMIS_52740 631c0800de68af1e797b12801dc069dd 307 SUPERFAMILY SSF53474 48 244 1.37E-19 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_52740 631c0800de68af1e797b12801dc069dd 307 Gene3D G3DSA:3.40.50.1820 19 300 3.2E-34 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_52740 631c0800de68af1e797b12801dc069dd 307 Pfam PF12740 Chlorophyllase enzyme 51 171 7.7E-11 T 14-10-2018 IPR017395 Chlorophyllase GO:0015996|GO:0047746 KEGG: 00860+3.1.1.14|MetaCyc: PWY-5098|MetaCyc: PWY-6927|MetaCyc: PWY-7164 AMIS_54210 c3faede74400f91113fc63d91c25a3fe 126 Pfam PF01339 CheB methylesterase 9 76 9.2E-15 T 14-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AMIS_54210 c3faede74400f91113fc63d91c25a3fe 126 Gene3D G3DSA:3.40.50.180 2 109 2.0E-18 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal AMIS_54210 c3faede74400f91113fc63d91c25a3fe 126 SUPERFAMILY SSF52738 4 83 7.98E-18 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal AMIS_36760 6d53e9e5581e8c27dc2e716ae69deccd 392 Pfam PF13367 Protease prsW family 99 287 2.2E-36 T 14-10-2018 IPR026898 Protease PrsW GO:0008233 AMIS_38580 ce80d4341bea3b3613d1e953e4f91cee 226 Pfam PF11361 Protein of unknown function (DUF3159) 13 202 1.1E-54 T 14-10-2018 IPR016566 Uncharacterised conserved protein UCP010219 AMIS_13280 b6f09e9d98ce4e8d9e4ed8dd5113d302 244 Pfam PF02591 C4-type zinc ribbon domain 202 236 1.1E-10 T 14-10-2018 IPR003743 C4-type zinc ribbon domain AMIS_18420 1185e9cd40bc1ae74541fc42b95fcce1 343 SUPERFAMILY SSF69304 105 335 4.45E-7 T 14-10-2018 AMIS_35230 d56dcdc0ee1a87b91e3f7cc1ab69c68b 221 Pfam PF13349 Putative adhesin 56 218 5.8E-10 T 14-10-2018 IPR025164 Putative adhesin AMIS_41290 65e666f3cccc1d69740f4b30b0a8b58c 372 Gene3D G3DSA:3.30.565.10 255 372 3.3E-19 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_41290 65e666f3cccc1d69740f4b30b0a8b58c 372 SUPERFAMILY SSF55874 263 371 7.69E-6 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_41290 65e666f3cccc1d69740f4b30b0a8b58c 372 Pfam PF07730 Histidine kinase 189 252 1.7E-15 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMIS_69200 1e56f69a63efaaeb4cbd029affa49e14 245 Gene3D G3DSA:3.40.630.30 33 201 2.8E-20 T 14-10-2018 AMIS_28770 67edc99c9c1ea63e0c6f5619030657c1 220 SUPERFAMILY SSF52540 25 187 3.61E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_28770 67edc99c9c1ea63e0c6f5619030657c1 220 Gene3D G3DSA:3.40.50.300 4 208 4.0E-42 T 14-10-2018 AMIS_28770 67edc99c9c1ea63e0c6f5619030657c1 220 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 28 170 8.1E-5 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 AMIS_39550 cde5802def0e74cd96564d96b7b4b915 276 Pfam PF13367 Protease prsW family 79 252 9.0E-28 T 14-10-2018 IPR026898 Protease PrsW GO:0008233 AMIS_3620 e0fc2993b186c46a2459e7c6454c233f 201 Gene3D G3DSA:2.60.40.10 15 125 6.3E-8 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_76200 fc3cbf24920f1a8ef33a5376356c3562 459 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 215 446 8.6E-28 T 14-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 AMIS_76200 fc3cbf24920f1a8ef33a5376356c3562 459 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 1 96 1.1E-13 T 14-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 AMIS_64320 d0bc14af38779d204394c5f951eb527b 501 Pfam PF13191 AAA ATPase domain 4 162 4.3E-19 T 14-10-2018 AMIS_64320 d0bc14af38779d204394c5f951eb527b 501 SUPERFAMILY SSF52540 15 169 8.4E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_53180 b4c66ba486d1d89b5e24cbae05bcd144 796 Pfam PF02687 FtsX-like permease family 282 376 4.7E-9 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AMIS_34950 5a7697120081c763273c0bb07b82937a 212 Pfam PF14025 Protein of unknown function (DUF4241) 34 204 4.0E-47 T 14-10-2018 IPR025335 Protein of unknown function DUF4241 AMIS_10390 8d2bb76b3230c583a9f482c9afcacffd 268 SUPERFAMILY SSF52266 32 266 5.5E-53 T 14-10-2018 AMIS_10390 8d2bb76b3230c583a9f482c9afcacffd 268 Gene3D G3DSA:3.40.50.1110 29 265 1.9E-61 T 14-10-2018 IPR036514 SGNH hydrolase superfamily AMIS_10390 8d2bb76b3230c583a9f482c9afcacffd 268 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 35 257 1.1E-22 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain AMIS_23090 9219593057ebfa6d885071a4a96f54e8 222 SUPERFAMILY SSF52540 1 221 2.66E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_23090 9219593057ebfa6d885071a4a96f54e8 222 Gene3D G3DSA:3.40.50.300 1 222 1.6E-72 T 14-10-2018 AMIS_23090 9219593057ebfa6d885071a4a96f54e8 222 SMART SM00382 30 218 1.4E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain AMIS_23090 9219593057ebfa6d885071a4a96f54e8 222 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMIS_23090 9219593057ebfa6d885071a4a96f54e8 222 Pfam PF00005 ABC transporter 21 169 4.2E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMIS_13620 c63178c18eda8a764e3399d50710e3c6 372 Pfam PF09594 Glycosyltransferase family 87 59 286 3.2E-51 T 14-10-2018 IPR018584 Glycosyltransferase family 87 GO:0016758 AMIS_67420 6375dd8f219c796e1f47343cc2b1a062 248 TIGRFAM TIGR00715 precor6x_red: precorrin-6x reductase 1 222 3.9E-48 T 14-10-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 AMIS_67420 6375dd8f219c796e1f47343cc2b1a062 248 Pfam PF02571 Precorrin-6x reductase CbiJ/CobK 2 237 4.3E-69 T 14-10-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 AMIS_42060 f882ed2ebe429e58d8b815f241f2326a 288 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 21 93 9.5E-28 T 14-10-2018 IPR025161 Putative transposase IS4/IS5 family AMIS_42060 f882ed2ebe429e58d8b815f241f2326a 288 Pfam PF01609 Transposase DDE domain 111 258 1.3E-16 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AMIS_74830 66877421f78ccc4fce88677a57c328d7 422 Pfam PF02653 Branched-chain amino acid transport system / permease component 126 401 6.8E-37 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 AMIS_23600 2ec8138da13b0eff9689e1a9f7db3282 57 TIGRFAM TIGR04268 FxSxx-COOH: FXSXX-COOH protein 18 56 3.2E-9 T 14-10-2018 IPR026334 FXSXX-COOH protein AMIS_68550 cafd308116e0c29ca60badd97363a95f 183 Pfam PF13399 LytR cell envelope-related transcriptional attenuator 58 145 3.7E-11 T 14-10-2018 IPR027381 Putative LytR/CpsA/Psr regulator, C-terminal domain AMIS_16770 b312a8f82312c943a0a3caf1bf2c86d8 270 Pfam PF11296 Protein of unknown function (DUF3097) 5 266 1.1E-119 T 14-10-2018 IPR021447 Protein of unknown function DUF3097 AMIS_42690 2ceb7b99b51f8d44a39e7ac415f72af6 328 SUPERFAMILY SSF63829 22 323 2.29E-41 T 14-10-2018 AMIS_42690 2ceb7b99b51f8d44a39e7ac415f72af6 328 Gene3D G3DSA:2.120.10.30 22 326 8.4E-50 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AMIS_42690 2ceb7b99b51f8d44a39e7ac415f72af6 328 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 54 237 1.3E-15 T 14-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region AMIS_65460 f1b0454b2ecd9aa6ee0c7ed2e871bc54 201 Pfam PF09335 SNARE associated Golgi protein 29 148 1.4E-13 T 14-10-2018 IPR032816 SNARE associated Golgi protein AMIS_32660 887a51a46c500e9015e794eaed13e24c 428 SUPERFAMILY SSF48317 36 421 2.54E-62 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily AMIS_32660 887a51a46c500e9015e794eaed13e24c 428 Gene3D G3DSA:1.10.606.20 38 426 4.4E-74 T 14-10-2018 AMIS_32660 887a51a46c500e9015e794eaed13e24c 428 Pfam PF01569 PAP2 superfamily 288 417 3.1E-11 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMIS_70040 9f5b0581580dc39f1166433dfed754f1 372 Pfam PF01148 Cytidylyltransferase family 116 368 1.1E-54 T 14-10-2018 AMIS_70040 9f5b0581580dc39f1166433dfed754f1 372 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 327 353 - T 14-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 AMIS_76830 f74e70e5eceaf6d1f9cac6280d29265d 208 Pfam PF01865 Protein of unknown function DUF47 9 205 1.1E-24 T 14-10-2018 IPR018445 Putative phosphate transport regulator AMIS_76830 f74e70e5eceaf6d1f9cac6280d29265d 208 Gene3D G3DSA:1.20.58.220 12 208 1.7E-59 T 14-10-2018 IPR038078 PhoU-like domain superfamily AMIS_1510 bbb574b971f7c1529c1f50bd8a0e797a 284 Gene3D G3DSA:2.102.10.10 177 284 5.2E-26 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AMIS_1510 bbb574b971f7c1529c1f50bd8a0e797a 284 Pfam PF00355 Rieske [2Fe-2S] domain 180 267 3.4E-14 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AMIS_1510 bbb574b971f7c1529c1f50bd8a0e797a 284 SUPERFAMILY SSF50022 177 282 8.51E-25 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AMIS_67910 1c7229f0a9d1892d0c95a9d54a89acc5 326 SUPERFAMILY SSF53098 3 317 1.06E-64 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily AMIS_47740 7e97e80873f53a741c4f33f56d6f8620 772 Pfam PF12704 MacB-like periplasmic core domain 417 616 4.6E-7 T 14-10-2018 IPR025857 MacB-like periplasmic core domain AMIS_47740 7e97e80873f53a741c4f33f56d6f8620 772 Pfam PF02687 FtsX-like permease family 667 763 1.2E-8 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AMIS_47740 7e97e80873f53a741c4f33f56d6f8620 772 Pfam PF02687 FtsX-like permease family 279 369 1.6E-7 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AMIS_24180 9ca9d33f87c2c8108f4918437b73f52b 648 SUPERFAMILY SSF48371 368 612 5.9E-5 T 14-10-2018 IPR016024 Armadillo-type fold AMIS_68150 9af2c2680a3732cc9330581631cac747 151 Pfam PF07885 Ion channel 31 94 8.5E-14 T 14-10-2018 IPR013099 Potassium channel domain AMIS_68150 9af2c2680a3732cc9330581631cac747 151 Gene3D G3DSA:1.10.287.70 9 139 2.3E-20 T 14-10-2018 AMIS_68150 9af2c2680a3732cc9330581631cac747 151 SUPERFAMILY SSF81324 24 102 9.16E-21 T 14-10-2018 AMIS_51730 2eecca537ffb54da0ed2255709f9d12a 205 Pfam PF04892 VanZ like family 106 190 8.7E-14 T 14-10-2018 IPR006976 VanZ-like AMIS_63950 9f94e6c5549db0d896eee316d0a3a581 524 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 6 519 7.1E-91 T 14-10-2018 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 AMIS_63950 9f94e6c5549db0d896eee316d0a3a581 524 Pfam PF00999 Sodium/hydrogen exchanger family 8 401 9.3E-51 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AMIS_8330 3bac41b8a1ad8a1baf06227463507d0d 165 Pfam PF01814 Hemerythrin HHE cation binding domain 24 140 2.9E-9 T 14-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 AMIS_8090 3c83738b34b5500ef2aa7eea4300851f 59 SUPERFAMILY SSF52540 16 52 2.2E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_40170 bffa17688e4d93942eab1ac0861cd820 607 Gene3D G3DSA:3.40.50.1460 36 217 1.7E-7 T 14-10-2018 AMIS_40170 bffa17688e4d93942eab1ac0861cd820 607 SUPERFAMILY SSF52129 35 190 1.41E-7 T 14-10-2018 IPR029030 Caspase-like domain superfamily AMIS_70460 857072c17b6f8672ac1a7fa8c8b009e4 685 Pfam PF01757 Acyltransferase family 24 313 3.3E-28 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 AMIS_70460 857072c17b6f8672ac1a7fa8c8b009e4 685 SUPERFAMILY SSF52266 463 677 5.76E-6 T 14-10-2018 AMIS_26760 dddd33855447a779e5916ab8290ae65c 536 Gene3D G3DSA:3.40.30.120 404 536 4.2E-19 T 14-10-2018 AMIS_26760 dddd33855447a779e5916ab8290ae65c 536 Gene3D G3DSA:3.50.50.60 256 403 1.7E-44 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_26760 dddd33855447a779e5916ab8290ae65c 536 Gene3D G3DSA:3.50.50.60 1 188 9.2E-51 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_26760 dddd33855447a779e5916ab8290ae65c 536 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 144 159 5.6E-42 T 14-10-2018 AMIS_26760 dddd33855447a779e5916ab8290ae65c 536 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 294 309 5.6E-42 T 14-10-2018 AMIS_26760 dddd33855447a779e5916ab8290ae65c 536 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 327 345 5.6E-42 T 14-10-2018 AMIS_26760 dddd33855447a779e5916ab8290ae65c 536 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 309 325 5.6E-42 T 14-10-2018 AMIS_26760 dddd33855447a779e5916ab8290ae65c 536 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 345 361 5.6E-42 T 14-10-2018 AMIS_26760 dddd33855447a779e5916ab8290ae65c 536 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 3 25 5.6E-42 T 14-10-2018 AMIS_26760 dddd33855447a779e5916ab8290ae65c 536 Pfam PF01494 FAD binding domain 2 358 1.9E-64 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 AMIS_26760 dddd33855447a779e5916ab8290ae65c 536 SUPERFAMILY SSF51905 2 367 2.1E-60 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_26240 e96539aa1f5912b9138affe7f01c31f2 175 Pfam PF04343 Protein of unknown function, DUF488 18 135 1.1E-28 T 14-10-2018 IPR007438 Protein of unknown function DUF488 AMIS_26240 e96539aa1f5912b9138affe7f01c31f2 175 PIRSF PIRSF024492 1 175 5.4E-48 T 14-10-2018 IPR014519 Uncharacterised conserved protein UCP024492 AMIS_18120 4cca4db4925bef6154e8fdeb5cd7ceaf 167 Pfam PF09990 Predicted membrane protein (DUF2231) 45 134 1.8E-6 T 14-10-2018 IPR019251 Domain of unknown function DUF2231, transmembrane AMIS_55290 9419579e0c4b50d8919cc7bdf148ee73 395 Gene3D G3DSA:1.10.10.2840 266 395 7.8E-22 T 14-10-2018 AMIS_55290 9419579e0c4b50d8919cc7bdf148ee73 395 Pfam PF13556 PucR C-terminal helix-turn-helix domain 334 391 1.3E-17 T 14-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain AMIS_30340 ccf4ebae8e0c331a5653b59e46ab585e 201 Pfam PF09335 SNARE associated Golgi protein 29 152 1.4E-18 T 14-10-2018 IPR032816 SNARE associated Golgi protein AMIS_30250 767f04d8217e8a83816fdcf3676ed3e8 158 Gene3D G3DSA:2.60.120.10 3 139 7.0E-33 T 14-10-2018 IPR014710 RmlC-like jelly roll fold AMIS_30250 767f04d8217e8a83816fdcf3676ed3e8 158 SUPERFAMILY SSF51206 6 147 2.36E-18 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like AMIS_29690 73892b956104cc3f518ee98f3f6613ba 111 Gene3D G3DSA:3.10.180.10 1 110 2.3E-25 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_29690 73892b956104cc3f518ee98f3f6613ba 111 SUPERFAMILY SSF54593 10 109 2.34E-15 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_61480 2eec2c8bef48d4272c347576014dec5e 77 SUPERFAMILY SSF53822 1 65 8.57E-18 T 14-10-2018 IPR028082 Periplasmic binding protein-like I AMIS_61480 2eec2c8bef48d4272c347576014dec5e 77 Gene3D G3DSA:3.40.50.2300 22 53 3.1E-16 T 14-10-2018 AMIS_61480 2eec2c8bef48d4272c347576014dec5e 77 Gene3D G3DSA:3.40.50.2300 1 58 3.1E-16 T 14-10-2018 AMIS_61480 2eec2c8bef48d4272c347576014dec5e 77 Pfam PF13377 Periplasmic binding protein-like domain 1 61 5.2E-14 T 14-10-2018 AMIS_4380 88de21164561c64ff1d54e5daf270ab4 669 SUPERFAMILY SSF69318 376 636 2.35E-14 T 14-10-2018 AMIS_77750 a5db14eab7b64d15fe328c44cf5f8946 308 Pfam PF13845 Septum formation 55 282 4.1E-50 T 14-10-2018 IPR026004 Septum formation-related domain AMIS_5020 c47b2e3f7520b32cfa7fa48a7f32fdff 247 Gene3D G3DSA:3.40.50.12500 9 247 2.9E-62 T 14-10-2018 AMIS_5020 c47b2e3f7520b32cfa7fa48a7f32fdff 247 PIRSF PIRSF015736 2 247 1.1E-58 T 14-10-2018 IPR026286 Maleate isomerase/Arylmalonate decarboxylase AMIS_78760 78bc12f1dbce58de0ff3dfe37ad12ede 116 Gene3D G3DSA:3.10.450.50 2 110 7.9E-16 T 14-10-2018 AMIS_78760 78bc12f1dbce58de0ff3dfe37ad12ede 116 SUPERFAMILY SSF54427 4 112 4.39E-7 T 14-10-2018 IPR032710 NTF2-like domain superfamily AMIS_62240 c0afea3dfc11eb4a005d811995a2301c 240 Gene3D G3DSA:1.10.1780.10 130 226 4.0E-17 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AMIS_62240 c0afea3dfc11eb4a005d811995a2301c 240 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 144 193 8.9E-11 T 14-10-2018 IPR004176 Clp, N-terminal AMIS_62240 c0afea3dfc11eb4a005d811995a2301c 240 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 72 116 0.31 T 14-10-2018 IPR004176 Clp, N-terminal AMIS_62240 c0afea3dfc11eb4a005d811995a2301c 240 Gene3D G3DSA:1.10.1780.10 7 121 9.3E-9 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AMIS_62240 c0afea3dfc11eb4a005d811995a2301c 240 SUPERFAMILY SSF81923 61 189 5.4E-16 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AMIS_55440 d1efffb976938a0bdda50914014aedaf 673 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 129 559 1.6E-54 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AMIS_55440 d1efffb976938a0bdda50914014aedaf 673 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 32 648 3.3E-119 T 14-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ AMIS_55990 97173e4294ddfe7aa4b6cd589203735e 302 Pfam PF13367 Protease prsW family 74 234 6.1E-22 T 14-10-2018 IPR026898 Protease PrsW GO:0008233 AMIS_47170 0687bde679d4d24b92fa669fe545c8cc 282 Gene3D G3DSA:2.60.120.620 14 272 1.8E-29 T 14-10-2018 AMIS_47170 0687bde679d4d24b92fa669fe545c8cc 282 SUPERFAMILY SSF51197 21 236 9.61E-30 T 14-10-2018 AMIS_47170 0687bde679d4d24b92fa669fe545c8cc 282 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 26 220 1.0E-10 T 14-10-2018 IPR008775 Phytanoyl-CoA dioxygenase AMIS_57800 a95516129cf2619c7b8b84524d399084 333 Pfam PF02625 XdhC and CoxI family 13 78 1.0E-13 T 14-10-2018 IPR003777 XdhC- CoxI AMIS_57800 a95516129cf2619c7b8b84524d399084 333 Gene3D G3DSA:3.40.50.720 142 232 6.2E-10 T 14-10-2018 AMIS_57800 a95516129cf2619c7b8b84524d399084 333 Pfam PF13478 XdhC Rossmann domain 128 227 3.4E-10 T 14-10-2018 IPR027051 XdhC Rossmann domain AMIS_44350 6b232bae05e4277a91f2575c7e829b75 317 Gene3D G3DSA:1.25.10.10 92 274 1.0E-6 T 14-10-2018 IPR011989 Armadillo-like helical AMIS_44350 6b232bae05e4277a91f2575c7e829b75 317 SUPERFAMILY SSF48371 87 225 5.42E-8 T 14-10-2018 IPR016024 Armadillo-type fold AMIS_13660 1efea35b445c0a3fe805b770a0394d00 131 Pfam PF06271 RDD family 17 122 7.6E-9 T 14-10-2018 IPR010432 RDD AMIS_33070 c6a6fdb89a1d519b601ee923855f17d8 130 Gene3D G3DSA:2.30.110.10 3 128 2.1E-25 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AMIS_33070 c6a6fdb89a1d519b601ee923855f17d8 130 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 3 70 3.4E-11 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AMIS_33070 c6a6fdb89a1d519b601ee923855f17d8 130 SUPERFAMILY SSF50475 1 125 1.38E-21 T 14-10-2018 AMIS_43020 c881c69dcca233ceb3a1106bc61db5a4 185 Pfam PF01872 RibD C-terminal domain 4 177 3.3E-16 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 AMIS_43020 c881c69dcca233ceb3a1106bc61db5a4 185 Gene3D G3DSA:3.40.430.10 4 181 1.0E-31 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AMIS_43020 c881c69dcca233ceb3a1106bc61db5a4 185 SUPERFAMILY SSF53597 3 183 2.75E-27 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AMIS_25080 75cf6afdfc25992273f6b5c87deca8fa 353 Pfam PF01032 FecCD transport family 26 347 2.3E-88 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AMIS_25080 75cf6afdfc25992273f6b5c87deca8fa 353 Gene3D G3DSA:1.10.3470.10 11 351 1.3E-96 T 14-10-2018 IPR037294 ABC transporter, BtuC-like AMIS_25080 75cf6afdfc25992273f6b5c87deca8fa 353 SUPERFAMILY SSF81345 11 347 7.98E-76 T 14-10-2018 IPR037294 ABC transporter, BtuC-like AMIS_53510 5b1c4ac32c08ab7ea86640ba875a5103 328 PIRSF PIRSF016838 4 319 2.0E-109 T 14-10-2018 IPR028349 Protein PafC AMIS_53510 5b1c4ac32c08ab7ea86640ba875a5103 328 Pfam PF13280 WYL domain 143 310 3.7E-30 T 14-10-2018 IPR026881 WYL domain AMIS_58830 2893e5bfd7bf0b1c7d6434b53e099869 271 SUPERFAMILY SSF53474 46 251 2.58E-21 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_58830 2893e5bfd7bf0b1c7d6434b53e099869 271 Gene3D G3DSA:3.40.50.1820 17 270 3.5E-50 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_53600 826e163b7bca494055987049ed88e032 71 Pfam PF05639 Pup-like protein 4 71 3.5E-30 T 14-10-2018 IPR008515 Ubiquitin-like, Pup AMIS_53600 826e163b7bca494055987049ed88e032 71 TIGRFAM TIGR03687 pupylate_cterm: ubiquitin-like protein Pup 40 71 1.8E-22 T 14-10-2018 IPR008515 Ubiquitin-like, Pup AMIS_53600 826e163b7bca494055987049ed88e032 71 Hamap MF_02106 Prokaryotic ubiquitin-like protein Pup [pup]. 1 71 17.475 T 14-10-2018 IPR008515 Ubiquitin-like, Pup AMIS_10940 c35333a8da3c4a3b3e356fd25cd48f89 193 Pfam PF10722 Putative bacterial sensory transduction regulator 61 187 4.0E-17 T 14-10-2018 IPR019660 Putative sensory transduction regulator YbjN AMIS_49350 1a08be35e14f8983ee377a7c30da4b0c 736 Pfam PF05547 Immune inhibitor A peptidase M6 523 638 3.1E-13 T 14-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 AMIS_12980 c2e61d94db8f0c0dfdb13b2e3068882e 272 SUPERFAMILY SSF160240 186 262 1.44E-10 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 AMIS_12980 c2e61d94db8f0c0dfdb13b2e3068882e 272 SUPERFAMILY SSF161111 1 183 1.96E-46 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AMIS_12980 c2e61d94db8f0c0dfdb13b2e3068882e 272 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 1 261 2.6E-79 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AMIS_12980 c2e61d94db8f0c0dfdb13b2e3068882e 272 Gene3D G3DSA:1.20.1510.10 1 182 1.5E-35 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AMIS_12980 c2e61d94db8f0c0dfdb13b2e3068882e 272 Pfam PF01545 Cation efflux family 1 182 4.1E-41 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AMIS_60820 99590033ea8fed1b987355b48b4ee8b8 310 Gene3D G3DSA:3.40.50.300 48 309 9.3E-82 T 14-10-2018 AMIS_60820 99590033ea8fed1b987355b48b4ee8b8 310 SUPERFAMILY SSF52540 54 304 2.85E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_60820 99590033ea8fed1b987355b48b4ee8b8 310 Pfam PF13614 AAA domain 55 230 2.1E-61 T 14-10-2018 IPR025669 AAA domain AMIS_17990 874e69cb1960c0f9afca082e5ac0fa63 303 Pfam PF03631 Virulence factor BrkB 28 258 7.7E-21 T 14-10-2018 IPR017039 Virulence factor BrkB AMIS_74680 9b24dff15ae3e2ca06b1ea3fbc1817d5 210 Pfam PF14681 Uracil phosphoribosyltransferase 5 205 2.2E-58 T 14-10-2018 AMIS_74680 9b24dff15ae3e2ca06b1ea3fbc1817d5 210 Gene3D G3DSA:3.40.50.2020 1 206 1.9E-68 T 14-10-2018 AMIS_74680 9b24dff15ae3e2ca06b1ea3fbc1817d5 210 SUPERFAMILY SSF53271 3 205 2.88E-60 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like AMIS_74680 9b24dff15ae3e2ca06b1ea3fbc1817d5 210 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 205 2.7E-69 T 14-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 AMIS_63070 64b118d12c99514f96f48cc1a1aa7bee 90 Pfam PF14019 Protein of unknown function (DUF4235) 11 86 1.3E-24 T 14-10-2018 IPR025329 Protein of unknown function DUF4235 AMIS_13200 27dbe913b6cee4503972075057c513f4 143 Pfam PF11253 Protein of unknown function (DUF3052) 15 137 5.8E-53 T 14-10-2018 IPR021412 Protein of unknown function DUF3052 AMIS_60910 e5cb26e6c7254d15d444594eb970f6d8 370 Gene3D G3DSA:3.40.50.2000 175 345 1.3E-35 T 14-10-2018 AMIS_60910 e5cb26e6c7254d15d444594eb970f6d8 370 Gene3D G3DSA:3.40.50.2000 11 166 3.0E-16 T 14-10-2018 AMIS_60910 e5cb26e6c7254d15d444594eb970f6d8 370 Pfam PF13579 Glycosyl transferase 4-like domain 20 166 6.2E-22 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AMIS_60910 e5cb26e6c7254d15d444594eb970f6d8 370 Pfam PF00534 Glycosyl transferases group 1 185 343 6.9E-21 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 AMIS_60910 e5cb26e6c7254d15d444594eb970f6d8 370 SUPERFAMILY SSF53756 19 364 4.32E-58 T 14-10-2018 AMIS_35830 d00d6204de09e2ff73df7718d827f534 159 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 21 134 2.3E-16 T 14-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like AMIS_35830 d00d6204de09e2ff73df7718d827f534 159 SUPERFAMILY SSF55961 11 157 5.92E-36 T 14-10-2018 AMIS_35830 d00d6204de09e2ff73df7718d827f534 159 Gene3D G3DSA:3.30.530.20 10 159 4.8E-32 T 14-10-2018 IPR023393 START-like domain superfamily AMIS_38430 af3fa961c2fac154f20b2276d09a5066 146 Pfam PF16170 Domain of unknown function (DUF4873) 53 141 6.2E-29 T 14-10-2018 IPR032371 Domain of unknown function DUF4873 AMIS_39730 3269dd23a5d400f1934943aa1c7e625a 828 Pfam PF12770 CHAT domain 653 790 3.2E-6 T 14-10-2018 IPR024983 CHAT domain AMIS_15340 4cb718ae766ce105bdf80f607836a5b0 181 TIGRFAM TIGR00077 lspA: signal peptidase II 11 160 1.1E-26 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AMIS_15340 4cb718ae766ce105bdf80f607836a5b0 181 Pfam PF01252 Signal peptidase (SPase) II 17 157 2.9E-28 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AMIS_15340 4cb718ae766ce105bdf80f607836a5b0 181 ProSitePatterns PS00855 Signal peptidases II signature. 100 112 - T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AMIS_15340 4cb718ae766ce105bdf80f607836a5b0 181 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 8 165 14.716 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AMIS_15340 4cb718ae766ce105bdf80f607836a5b0 181 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 140 156 9.7E-16 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AMIS_15340 4cb718ae766ce105bdf80f607836a5b0 181 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 55 63 9.7E-16 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AMIS_15340 4cb718ae766ce105bdf80f607836a5b0 181 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 97 112 9.7E-16 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AMIS_62510 d3e4a8e864cdc8ec1190fca08a4dac3e 424 Gene3D G3DSA:1.10.10.10 333 420 1.2E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_62510 d3e4a8e864cdc8ec1190fca08a4dac3e 424 SUPERFAMILY SSF46785 367 417 1.36E-6 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_38950 1e9a46fee865d5ab52a44c09e6ecc13c 244 Pfam PF02517 CAAX protease self-immunity 119 230 2.6E-17 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 AMIS_38950 1e9a46fee865d5ab52a44c09e6ecc13c 244 PIRSF PIRSF026622 7 243 6.3E-47 T 14-10-2018 IPR015837 Uncharacterised conserved protein UCP026622, CAAX protease-type AMIS_3550 2169b3056b171f0e817247ec91afde2e 162 PRINTS PR00502 NUDIX hydrolase family signature 50 64 5.1E-8 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AMIS_3550 2169b3056b171f0e817247ec91afde2e 162 PRINTS PR00502 NUDIX hydrolase family signature 64 79 5.1E-8 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AMIS_3550 2169b3056b171f0e817247ec91afde2e 162 ProSitePatterns PS00893 Nudix box signature. 55 76 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMIS_3550 2169b3056b171f0e817247ec91afde2e 162 Gene3D G3DSA:3.90.79.10 5 143 2.0E-30 T 14-10-2018 AMIS_3550 2169b3056b171f0e817247ec91afde2e 162 Pfam PF00293 NUDIX domain 27 137 3.8E-21 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMIS_3550 2169b3056b171f0e817247ec91afde2e 162 SUPERFAMILY SSF55811 23 139 2.84E-30 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMIS_76950 e209a715233ecbb64f00d5dacfc3714c 245 Pfam PF11209 Protein of unknown function (DUF2993) 30 233 1.2E-28 T 14-10-2018 IPR021373 Protein of unknown function DUF2993 AMIS_47180 57705d8569aa0a0f83c726d638a1263a 690 Gene3D G3DSA:3.10.310.50 25 163 1.6E-31 T 14-10-2018 AMIS_47180 57705d8569aa0a0f83c726d638a1263a 690 Pfam PF04536 TPM domain 40 150 1.2E-12 T 14-10-2018 IPR007621 TPM domain AMIS_33610 57b13045d9a3aadb627c6394f2f4c202 230 SUPERFAMILY SSF56634 18 224 1.57E-8 T 14-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AMIS_28410 fbd7913a5cbc9900b4badff9e1ef16ef 100 Gene3D G3DSA:1.10.10.10 2 94 1.7E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_28410 fbd7913a5cbc9900b4badff9e1ef16ef 100 SUPERFAMILY SSF46785 4 92 7.52E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_28410 fbd7913a5cbc9900b4badff9e1ef16ef 100 Pfam PF13601 Winged helix DNA-binding domain 14 91 2.5E-14 T 14-10-2018 IPR027395 Winged helix DNA-binding domain AMIS_33080 3f346c6a623ed5bf861390b53724b0bd 259 SUPERFAMILY SSF51445 33 252 7.92E-15 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_33080 3f346c6a623ed5bf861390b53724b0bd 259 Gene3D G3DSA:3.20.20.80 5 252 3.3E-11 T 14-10-2018 AMIS_68140 f817c4671218db7f62ce88450932564e 520 SUPERFAMILY SSF53474 108 491 5.82E-24 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_68140 f817c4671218db7f62ce88450932564e 520 Pfam PF00561 alpha/beta hydrolase fold 107 490 9.0E-32 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMIS_23130 32135a60c5e48b594aa6ce77a0078897 203 Gene3D G3DSA:3.10.180.10 3 140 1.3E-21 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_23130 32135a60c5e48b594aa6ce77a0078897 203 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 136 2.0E-5 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMIS_23130 32135a60c5e48b594aa6ce77a0078897 203 SUPERFAMILY SSF54593 6 141 7.7E-20 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_6450 23bbd028b03f71a9a679deca7a0aace8 706 PRINTS PR01217 Proline rich extensin signature 492 513 4.3E-10 T 14-10-2018 AMIS_6450 23bbd028b03f71a9a679deca7a0aace8 706 PRINTS PR01217 Proline rich extensin signature 548 565 4.3E-10 T 14-10-2018 AMIS_6450 23bbd028b03f71a9a679deca7a0aace8 706 PRINTS PR01217 Proline rich extensin signature 576 601 4.3E-10 T 14-10-2018 AMIS_6450 23bbd028b03f71a9a679deca7a0aace8 706 PRINTS PR01217 Proline rich extensin signature 430 446 4.3E-10 T 14-10-2018 AMIS_6450 23bbd028b03f71a9a679deca7a0aace8 706 PRINTS PR01217 Proline rich extensin signature 525 541 4.3E-10 T 14-10-2018 AMIS_6450 23bbd028b03f71a9a679deca7a0aace8 706 Pfam PF17231 Family of unknown function (DUF5305) 276 490 1.4E-11 T 14-10-2018 IPR035185 Protein of unknown function DUF5305 AMIS_24920 0c1eaed8341847f877616d8c274f53fd 236 Pfam PF14016 Protein of unknown function (DUF4232) 75 211 2.7E-24 T 14-10-2018 IPR025326 Protein of unknown function DUF4232 AMIS_1260 1a82a10b7ffb69416fae966491dff07c 71 Pfam PF11273 Protein of unknown function (DUF3073) 2 62 6.8E-25 T 14-10-2018 IPR021426 Protein of unknown function DUF3073 AMIS_70880 ed399b7fe7f52dc099d749189d5741ac 241 SUPERFAMILY SSF69593 8 219 1.57E-44 T 14-10-2018 AMIS_70880 ed399b7fe7f52dc099d749189d5741ac 241 SMART SM00563 41 159 2.5E-34 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AMIS_70880 ed399b7fe7f52dc099d749189d5741ac 241 Pfam PF01553 Acyltransferase 31 155 1.9E-27 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AMIS_49320 d29a842d059a65a50926d2dd790cfe58 432 SUPERFAMILY SSF55874 295 415 2.61E-7 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_49320 d29a842d059a65a50926d2dd790cfe58 432 Gene3D G3DSA:3.30.565.10 288 430 5.9E-24 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_49320 d29a842d059a65a50926d2dd790cfe58 432 Pfam PF07730 Histidine kinase 210 276 5.1E-16 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMIS_51870 070976ec96f12f6ab24ba395bb16c2fa 110 Pfam PF06947 Protein of unknown function (DUF1290) 21 108 4.0E-34 T 14-10-2018 IPR009709 Protein of unknown function DUF1290 AMIS_51870 070976ec96f12f6ab24ba395bb16c2fa 110 PIRSF PIRSF018579 1 110 5.7E-44 T 14-10-2018 IPR009709 Protein of unknown function DUF1290 AMIS_52180 de6143412b26d91d4dbcbac0e6e07a8c 501 Pfam PF08811 Protein of unknown function (DUF1800) 43 500 1.1E-117 T 14-10-2018 IPR014917 Protein of unknown function DUF1800 AMIS_67680 481d8b55ab6e65a410199b0d5b6224ed 331 Pfam PF00487 Fatty acid desaturase 58 306 9.4E-42 T 14-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 AMIS_67680 481d8b55ab6e65a410199b0d5b6224ed 331 PIRSF PIRSF015921 1 330 3.2E-70 T 14-10-2018 IPR012171 Fatty acid desaturase GO:0006629|GO:0016021|GO:0016491 AMIS_7780 1b8336403cab510c6d06c44b26a49279 114 Pfam PF06803 Protein of unknown function (DUF1232) 53 89 4.2E-12 T 14-10-2018 IPR010652 Domain of unknown function DUF1232 MetaCyc: PWY-7511 AMIS_5000 8abe71523b9ad75cc0f3498cbaf40806 266 SUPERFAMILY SSF55729 64 257 3.11E-19 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_5000 8abe71523b9ad75cc0f3498cbaf40806 266 Gene3D G3DSA:3.40.630.30 27 261 4.9E-31 T 14-10-2018 AMIS_52960 c293cd939600843fbbec5efef5c7e33b 397 Pfam PF01266 FAD dependent oxidoreductase 6 392 4.3E-58 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AMIS_52960 c293cd939600843fbbec5efef5c7e33b 397 SUPERFAMILY SSF51905 6 395 9.06E-39 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMIS_23220 903f32528755288820ad8620fe47917e 340 TIGRFAM TIGR03858 LLM_2I7G: probable oxidoreductase, LLM family 4 336 2.6E-149 T 14-10-2018 IPR022290 Conserved hypothetical protein CHP03858, luciferase-like monooxygenase, putative AMIS_23220 903f32528755288820ad8620fe47917e 340 Gene3D G3DSA:3.20.20.30 2 340 1.8E-79 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_23220 903f32528755288820ad8620fe47917e 340 Pfam PF00296 Luciferase-like monooxygenase 18 300 2.8E-48 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMIS_23220 903f32528755288820ad8620fe47917e 340 SUPERFAMILY SSF51679 4 337 2.62E-72 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMIS_19680 c16364c75f3c92e588d1165e3d68254e 158 SUPERFAMILY SSF82771 2 70 2.48E-5 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 AMIS_22830 2f68f61817f7b0ba43ae952f2772d919 213 Pfam PF01914 MarC family integral membrane protein 9 204 2.9E-26 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AMIS_41560 798da98325bd9605e215290462ecde43 104 Gene3D G3DSA:1.10.3730.20 1 104 1.3E-28 T 14-10-2018 AMIS_41560 798da98325bd9605e215290462ecde43 104 Pfam PF00893 Small Multidrug Resistance protein 1 93 2.1E-22 T 14-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 AMIS_41560 798da98325bd9605e215290462ecde43 104 SUPERFAMILY SSF103481 5 102 2.35E-17 T 14-10-2018 AMIS_28040 1e8b93ae61b7315c4a734dea1844cc21 388 SUPERFAMILY SSF50969 48 334 4.79E-11 T 14-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like AMIS_24200 a694090567309e0dcc420a4044788c71 136 SMART SM00450 21 126 4.2E-14 T 14-10-2018 IPR001763 Rhodanese-like domain AMIS_24200 a694090567309e0dcc420a4044788c71 136 SUPERFAMILY SSF52821 10 131 3.93E-22 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily AMIS_24200 a694090567309e0dcc420a4044788c71 136 Pfam PF00581 Rhodanese-like domain 29 122 1.7E-8 T 14-10-2018 IPR001763 Rhodanese-like domain AMIS_24200 a694090567309e0dcc420a4044788c71 136 Gene3D G3DSA:3.40.250.10 3 130 6.2E-27 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily AMIS_29300 ed78d323e47ac720fbc3fc20622fa982 232 Pfam PF14435 SUKH-4 immunity protein 37 227 1.9E-43 T 14-10-2018 IPR025851 SUKH-4 immunity protein AMIS_2000 2776971c03d9a9508348076040cba473 205 Pfam PF06475 Putative glycolipid-binding 7 204 2.0E-46 T 14-10-2018 IPR009467 Putative glycolipid-binding protein AMIS_2000 2776971c03d9a9508348076040cba473 205 SUPERFAMILY SSF159275 4 204 1.7E-46 T 14-10-2018 AMIS_61590 671257f96e238016a65983049bf1afa5 221 Pfam PF02698 DUF218 domain 52 170 1.0E-21 T 14-10-2018 IPR003848 Domain of unknown function DUF218 AMIS_51500 dffe8bd240c5bb58cdcc7f6569ebd1ca 217 Gene3D G3DSA:1.10.3720.10 6 206 3.6E-30 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_51500 dffe8bd240c5bb58cdcc7f6569ebd1ca 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 207 2.0E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_51500 dffe8bd240c5bb58cdcc7f6569ebd1ca 217 SUPERFAMILY SSF161098 11 193 4.45E-32 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_9400 bdae3bbf3a4645981e71ad8a2da70b9b 166 Pfam PF09438 Domain of unknown function (DUF2017) 39 162 3.4E-35 T 14-10-2018 IPR018561 Domain of unknown function DUF2017 AMIS_78610 b78ccfd0800da41af0bc55863443b561 169 TIGRFAM TIGR03941 tRNA_deam_assoc: putative tRNA adenosine deaminase-associated protein 3 166 8.5E-44 T 14-10-2018 IPR023869 tRNA adenosine deaminase-associated protein, putative AMIS_36590 fb8da500c9e45934d2c0bd63d5bdad03 231 Pfam PF07510 Protein of unknown function (DUF1524) 73 173 9.4E-9 T 14-10-2018 IPR011089 Domain of unknown function DUF1524 AMIS_12580 f1ffa6c1b86770c78bfa0102ecc73bff 100 Pfam PF10824 Excreted virulence factor EspC, type VII ESX diderm 3 93 9.7E-8 T 14-10-2018 IPR022536 ESX-1 secretion-associated protein EspC GO:0009306 AMIS_75630 a246503b67ff1fc7df5c4308e5adc482 55 Pfam PF11314 Protein of unknown function (DUF3117) 4 52 4.4E-29 T 14-10-2018 IPR021465 Protein of unknown function DUF3117 AMIS_73360 5c93f7f40551c6d35fbf0b585ce694c3 288 Gene3D G3DSA:2.60.120.620 2 244 1.4E-39 T 14-10-2018 AMIS_73360 5c93f7f40551c6d35fbf0b585ce694c3 288 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 20 210 5.2E-12 T 14-10-2018 IPR008775 Phytanoyl-CoA dioxygenase AMIS_73360 5c93f7f40551c6d35fbf0b585ce694c3 288 SUPERFAMILY SSF51197 11 225 1.37E-37 T 14-10-2018 AMIS_49290 785af05014de8e56cebecc2c233bef5b 651 Gene3D G3DSA:1.20.1740.10 4 455 1.1E-28 T 14-10-2018 AMIS_49290 785af05014de8e56cebecc2c233bef5b 651 Pfam PF00324 Amino acid permease 17 449 7.2E-11 T 14-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 AMIS_54640 d0ba7c85a5be1bb5bc6153fea8106f3d 105 Pfam PF04024 PspC domain 35 90 1.0E-19 T 14-10-2018 IPR007168 Phage shock protein, PspC, N-terminal AMIS_45690 a851f90f503422c87cbbbbbe4d8da5e9 406 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 161 346 3.5E-19 T 14-10-2018 IPR018713 Domain of unknown function DUF2236 AMIS_69630 8c080216994083a5be955cba10c32bc1 343 SUPERFAMILY SSF53335 135 342 3.04E-14 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMIS_61210 5fc37e010612eec40db68230d85a55f4 171 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 66 165 2.2E-11 T 14-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 AMIS_61210 5fc37e010612eec40db68230d85a55f4 171 SUPERFAMILY SSF50118 64 166 5.45E-12 T 14-10-2018 AMIS_60650 2883260a3727781f9560cdc08aa18a08 114 Pfam PF03551 Transcriptional regulator PadR-like family 19 90 1.7E-20 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal AMIS_60650 2883260a3727781f9560cdc08aa18a08 114 Gene3D G3DSA:1.10.10.10 7 113 1.6E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMIS_60650 2883260a3727781f9560cdc08aa18a08 114 SUPERFAMILY SSF46785 15 108 1.06E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMIS_69980 eb40ea167f9d07bbd774cd710e1fe789 271 Pfam PF03631 Virulence factor BrkB 11 254 4.7E-18 T 14-10-2018 IPR017039 Virulence factor BrkB AMIS_25090 0590697a13c6ec9a562ce0db73b7f8bc 359 Pfam PF13515 Fusaric acid resistance protein-like 20 141 4.2E-9 T 14-10-2018 AMIS_78050 8a07d5f6da803ed5c45b791ae9d32d1e 191 SUPERFAMILY SSF53271 11 186 5.77E-52 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like AMIS_78050 8a07d5f6da803ed5c45b791ae9d32d1e 191 Pfam PF00156 Phosphoribosyl transferase domain 19 170 2.7E-21 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AMIS_78050 8a07d5f6da803ed5c45b791ae9d32d1e 191 Gene3D G3DSA:3.40.50.2020 4 191 2.0E-64 T 14-10-2018 AMIS_78050 8a07d5f6da803ed5c45b791ae9d32d1e 191 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 14 184 9.2E-64 T 14-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 AMIS_4560 3078f2166bed97215c8e2f94bda0a745 689 Gene3D G3DSA:3.40.720.10 166 459 9.4E-21 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AMIS_4560 3078f2166bed97215c8e2f94bda0a745 689 SUPERFAMILY SSF53649 169 464 4.8E-16 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AMIS_4560 3078f2166bed97215c8e2f94bda0a745 689 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 178 460 3.5E-10 T 14-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 AMIS_3810 216db0ff8f7c0ab68f84c10f3fa75c21 101 Pfam PF10745 Protein of unknown function (DUF2530) 35 82 1.9E-6 T 14-10-2018 IPR019681 Protein of unknown function DUF2530 AMIS_15770 09fa9f5231dd3224808718f1b5c4d2dc 425 Pfam PF02653 Branched-chain amino acid transport system / permease component 144 409 1.0E-38 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 AMIS_23300 6281a025c09d06275fea12bdbfea9fbd 104 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 3 98 5.1E-8 T 14-10-2018 IPR008407 Branched-chain amino acid transport, AzlD AMIS_38090 1ab015121df3d37678b92340c2db5354 231 Pfam PF08445 FR47-like protein 137 223 1.5E-25 T 14-10-2018 IPR013653 FR47-like GO:0016747 AMIS_38090 1ab015121df3d37678b92340c2db5354 231 Gene3D G3DSA:3.40.630.30 5 230 4.9E-61 T 14-10-2018 AMIS_38090 1ab015121df3d37678b92340c2db5354 231 SUPERFAMILY SSF55729 107 220 2.23E-19 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_21010 a64c6dc7f8c90aef0206ce5cc1d43524 62 Pfam PF04149 Domain of unknown function (DUF397) 6 55 2.1E-17 T 14-10-2018 IPR007278 Domain of unknown function DUF397 AMIS_16630 408de3ba3abeb9d341cc44b3fb7450d4 173 Pfam PF03703 Bacterial PH domain 86 162 2.1E-15 T 14-10-2018 IPR005182 Domain of unknown function DUF304 AMIS_2320 76dfa1afbea9bf11361b5b881c810324 66 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 8 52 1.7E-6 T 14-10-2018 IPR010260 DNA-binding transcriptional activator AlpA AMIS_20550 729d5b52a4a4066e5f8cd8e1cec59661 270 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 166 257 1.8E-8 T 14-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase AMIS_20550 729d5b52a4a4066e5f8cd8e1cec59661 270 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 139 1.0E-15 T 14-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase AMIS_44500 2584a3d855bf6d51497ca38cf27d4c2e 448 Pfam PF06081 Aromatic acid exporter family member 1 77 206 4.3E-11 T 14-10-2018 IPR010343 Aromatic acid exporter family member 1 AMIS_67470 1a17502684cd5b7575f0369ed01984bb 149 Gene3D G3DSA:2.40.30.100 1 81 4.0E-9 T 14-10-2018 IPR037079 AF2212/PG0164-like superfamily AMIS_67470 1a17502684cd5b7575f0369ed01984bb 149 SUPERFAMILY SSF141694 1 81 1.75E-14 T 14-10-2018 AMIS_67470 1a17502684cd5b7575f0369ed01984bb 149 Pfam PF08922 Domain of unknown function (DUF1905) 3 78 7.3E-16 T 14-10-2018 IPR015018 Protein of unknown function DUF1905 AMIS_67470 1a17502684cd5b7575f0369ed01984bb 149 Pfam PF13376 Bacteriocin-protection, YdeI or OmpD-Associated 87 146 2.6E-19 T 14-10-2018 AMIS_29960 f7bc71ece34c00741ad15cd1047725f3 181 Pfam PF10517 Electron transfer DM13 72 178 8.6E-28 T 14-10-2018 IPR019545 DM13 domain AMIS_61600 d642c87486d4699f184f1420dd886539 257 Pfam PF08445 FR47-like protein 165 243 3.8E-8 T 14-10-2018 IPR013653 FR47-like GO:0016747 AMIS_61600 d642c87486d4699f184f1420dd886539 257 SUPERFAMILY SSF55729 131 244 7.57E-14 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_61600 d642c87486d4699f184f1420dd886539 257 Gene3D G3DSA:3.40.630.30 10 247 9.7E-20 T 14-10-2018 AMIS_81190 68df76aff8be833458fdd55bcdd7b51b 283 SUPERFAMILY SSF52540 24 273 7.88E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_81190 68df76aff8be833458fdd55bcdd7b51b 283 Gene3D G3DSA:3.40.50.300 20 277 2.2E-77 T 14-10-2018 AMIS_81190 68df76aff8be833458fdd55bcdd7b51b 283 Pfam PF13614 AAA domain 25 201 1.7E-59 T 14-10-2018 IPR025669 AAA domain AMIS_60300 ef3cac0ec0a9a89ef9ae4c85975c1012 213 Pfam PF12787 EcsC protein family 49 208 3.8E-10 T 14-10-2018 IPR024787 EcsC protein AMIS_13410 cb9cddf75d5fb23367a3be1832811bfd 118 Pfam PF13676 TIR domain 5 90 1.1E-8 T 14-10-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 AMIS_73090 b09b607244a38ac47088f94646af9776 250 Gene3D G3DSA:3.30.565.10 121 248 6.6E-18 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_57390 ea8657a4d8e5ae16b800642235aa21f1 554 Pfam PF13731 WxL domain surface cell wall-binding 435 554 4.0E-8 T 14-10-2018 IPR027994 WxL domain AMIS_30210 a251f69a078660a5add02fd32099c8b8 123 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 1 109 1.6E-12 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I AMIS_30210 a251f69a078660a5add02fd32099c8b8 123 SUPERFAMILY SSF52788 1 113 1.57E-28 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily AMIS_30210 a251f69a078660a5add02fd32099c8b8 123 SMART SM00226 1 115 5.1E-17 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I AMIS_30210 a251f69a078660a5add02fd32099c8b8 123 Gene3D G3DSA:3.40.50.2300 1 115 4.1E-30 T 14-10-2018 AMIS_73180 b5837987066aebe2cfbd74a6dd7d0670 519 Pfam PF08811 Protein of unknown function (DUF1800) 54 517 5.9E-112 T 14-10-2018 IPR014917 Protein of unknown function DUF1800 AMIS_44760 9b587faa4bb641654eed76c2238ca31c 289 Pfam PF12679 ABC-2 family transporter protein 90 219 2.4E-6 T 14-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 AMIS_64590 ea753c9005634de2755639519000ee8a 214 SUPERFAMILY SSF51735 1 205 5.42E-29 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_64590 ea753c9005634de2755639519000ee8a 214 Gene3D G3DSA:3.40.50.720 1 214 2.8E-38 T 14-10-2018 AMIS_75960 f19f9e0c13d723781787e9cd6de66912 275 ProDom PD040376 SCO3349 RV0495C/MT0515 ML2435 MB0506C CGL0407 9 256 1.0E-81 T 14-10-2018 AMIS_12700 33ed7af963224402119e5a7ce6effa83 285 SUPERFAMILY SSF52266 42 280 5.5E-23 T 14-10-2018 AMIS_12700 33ed7af963224402119e5a7ce6effa83 285 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 47 271 1.1E-18 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain AMIS_65050 630bf25236d834745e7e0a0f9595f2bb 164 Gene3D G3DSA:3.40.630.30 21 148 1.6E-15 T 14-10-2018 AMIS_65050 630bf25236d834745e7e0a0f9595f2bb 164 SUPERFAMILY SSF55729 34 151 1.8E-14 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_65050 630bf25236d834745e7e0a0f9595f2bb 164 Pfam PF13302 Acetyltransferase (GNAT) domain 40 146 6.7E-8 T 14-10-2018 IPR000182 GNAT domain AMIS_36420 29afeb2b5bbc73767b49f8b8f5b552fc 609 SUPERFAMILY SSF51126 318 546 6.54E-7 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor AMIS_73520 d4eadae2c5b4a91da81960dbf9bc204c 257 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 73 244 2.2E-46 T 14-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG AMIS_73520 d4eadae2c5b4a91da81960dbf9bc204c 257 Pfam PF03641 Possible lysine decarboxylase 115 244 5.2E-35 T 14-10-2018 IPR031100 LOG family AMIS_73520 d4eadae2c5b4a91da81960dbf9bc204c 257 Gene3D G3DSA:3.40.50.450 50 249 3.2E-67 T 14-10-2018 AMIS_73520 d4eadae2c5b4a91da81960dbf9bc204c 257 SUPERFAMILY SSF102405 42 246 2.59E-64 T 14-10-2018 AMIS_45580 dc8ca889f10c7fb875007fa0ce7e8371 284 Gene3D G3DSA:1.10.3470.10 36 265 1.2E-7 T 14-10-2018 IPR037294 ABC transporter, BtuC-like AMIS_45580 dc8ca889f10c7fb875007fa0ce7e8371 284 SUPERFAMILY SSF81345 4 262 1.7E-27 T 14-10-2018 IPR037294 ABC transporter, BtuC-like AMIS_45580 dc8ca889f10c7fb875007fa0ce7e8371 284 Pfam PF00950 ABC 3 transport family 8 263 1.1E-54 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 AMIS_14000 a5755e73984731d44fbc4881e0e2c553 283 Pfam PF06182 ABC-2 family transporter protein 70 282 6.6E-15 T 14-10-2018 IPR010390 Protein of unknown function DUF990 AMIS_8990 c80081207e3ec2bf79cc97677f74365e 204 Pfam PF04350 Pilus assembly protein, PilO 50 180 5.1E-10 T 14-10-2018 IPR007445 Pilus assembly protein, PilO AMIS_8990 c80081207e3ec2bf79cc97677f74365e 204 Gene3D G3DSA:3.30.70.60 82 193 2.8E-6 T 14-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 AMIS_79660 b574ff48e1b231390583031f0a12141d 421 SUPERFAMILY SSF56601 17 398 5.07E-59 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMIS_79660 b574ff48e1b231390583031f0a12141d 421 Pfam PF00144 Beta-lactamase 31 385 2.6E-53 T 14-10-2018 IPR001466 Beta-lactamase-related AMIS_79660 b574ff48e1b231390583031f0a12141d 421 Gene3D G3DSA:3.40.710.30 11 405 1.3E-115 T 14-10-2018 AMIS_69280 176ee30b6090b2efe8a485e53cf941d7 410 Pfam PF09594 Glycosyltransferase family 87 65 301 1.9E-7 T 14-10-2018 IPR018584 Glycosyltransferase family 87 GO:0016758 AMIS_28370 3d504ba3f0c398f2e2094ecdd0fc921c 170 Gene3D G3DSA:3.10.450.50 5 165 2.6E-33 T 14-10-2018 AMIS_28370 3d504ba3f0c398f2e2094ecdd0fc921c 170 Pfam PF07366 SnoaL-like polyketide cyclase 16 145 4.1E-25 T 14-10-2018 IPR009959 Polyketide cyclase SnoaL-like GO:0030638 MetaCyc: PWY-7352|MetaCyc: PWY-7354 AMIS_28370 3d504ba3f0c398f2e2094ecdd0fc921c 170 SUPERFAMILY SSF54427 12 152 3.58E-30 T 14-10-2018 IPR032710 NTF2-like domain superfamily AMIS_65550 29c244c199409b97f83b27b5691046d0 380 SUPERFAMILY SSF55874 257 368 1.55E-9 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_65550 29c244c199409b97f83b27b5691046d0 380 Pfam PF07730 Histidine kinase 172 237 3.3E-15 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMIS_65550 29c244c199409b97f83b27b5691046d0 380 Gene3D G3DSA:3.30.565.10 250 377 1.5E-23 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMIS_36090 0ba8330e9734b5b7371518cd22776892 542 Pfam PF03403 Platelet-activating factor acetylhydrolase, isoform II 190 492 8.5E-19 T 14-10-2018 IPR005065 Platelet-activating factor acetylhydrolase-like GO:0003847|GO:0016042 KEGG: 00565+3.1.1.47 AMIS_36090 0ba8330e9734b5b7371518cd22776892 542 Gene3D G3DSA:3.40.50.1820 187 534 5.6E-81 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_36090 0ba8330e9734b5b7371518cd22776892 542 SUPERFAMILY SSF53474 213 486 5.09E-21 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold AMIS_8570 7ea0b4ebc143f1018970fa1478681d7d 85 Hamap MF_01479 Transcriptional regulator WhiB [whiB]. 1 85 18.829 T 14-10-2018 IPR003482 Transcription factor WhiB AMIS_8570 7ea0b4ebc143f1018970fa1478681d7d 85 Pfam PF02467 Transcription factor WhiB 17 80 9.5E-27 T 14-10-2018 IPR034768 WhiB-like iron-sulfur binding domain AMIS_17110 c2c54e403884596317de1a964b269f7a 318 Gene3D G3DSA:3.40.960.10 205 308 1.4E-6 T 14-10-2018 AMIS_17750 66bf76ddcbc912139d6b4b5e96ce3c4b 113 Pfam PF09851 Short C-terminal domain 84 111 7.0E-9 T 14-10-2018 IPR018649 SHOCT domain AMIS_42610 ea2307de272b74cb12bab6e773baedf5 193 Pfam PF03596 Cadmium resistance transporter 14 191 1.1E-28 T 14-10-2018 IPR004676 Cadmium resistance transporter AMIS_30540 917226dd0fcc4e2d51a304d0a2362d74 684 Pfam PF13777 Domain of unknown function (DUF4173) 429 618 2.1E-60 T 14-10-2018 IPR025231 Domain of unknown function DUF4173 AMIS_77270 6a44308e8e07f98571899546aa566901 137 Gene3D G3DSA:3.40.630.30 3 133 1.3E-25 T 14-10-2018 AMIS_77270 6a44308e8e07f98571899546aa566901 137 SUPERFAMILY SSF55729 16 126 1.56E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMIS_77270 6a44308e8e07f98571899546aa566901 137 Pfam PF00583 Acetyltransferase (GNAT) family 29 122 3.6E-17 T 14-10-2018 IPR000182 GNAT domain AMIS_38540 4c3dd4816952d82b6d6a97414ac9f999 455 Pfam PF01757 Acyltransferase family 28 342 1.3E-19 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 AMIS_24120 a37b84103a93749ab3bc72f7c75b2f4d 505 Pfam PF00999 Sodium/hydrogen exchanger family 9 429 1.4E-50 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AMIS_60940 5e1117ee8391f8fff2e6c951cd1ecfd9 309 Pfam PF11382 Copper transport outer membrane protein, MctB 2 305 1.5E-83 T 14-10-2018 IPR021522 Copper transporter MctB GO:0016020|GO:0055070 AMIS_73620 eee816796447f84fadfe9546eb9324ec 415 Pfam PF14362 Domain of unknown function (DUF4407) 22 337 1.0E-57 T 14-10-2018 IPR025519 Protein of unknown function DUF4407 AMIS_34280 94234240d8854e309aa7fb081fdae7cf 364 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 99 289 1.4E-19 T 14-10-2018 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AMIS_34280 94234240d8854e309aa7fb081fdae7cf 364 Gene3D G3DSA:3.30.590.20 83 363 1.4E-31 T 14-10-2018 AMIS_34280 94234240d8854e309aa7fb081fdae7cf 364 SUPERFAMILY SSF55931 152 363 8.53E-7 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AMIS_76390 3b6f6c8c0741b6a1815c5171fdc9ffad 142 Pfam PF04347 Flagellar biosynthesis protein, FliO 27 85 5.4E-9 T 14-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 AMIS_13040 a45c0ae344f2c968f125191b452ce739 163 Pfam PF11343 Protein of unknown function (DUF3145) 6 161 4.5E-69 T 14-10-2018 IPR021491 Protein of unknown function DUF3145 AMIS_8340 ea5aa31df9424cb3747f7498f075495d 409 Pfam PF01594 AI-2E family transporter 25 349 2.6E-62 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like AMIS_66940 65869b6a9b4699858005bf0e626f053a 832 SUPERFAMILY SSF56024 29 144 4.45E-6 T 14-10-2018 AMIS_66940 65869b6a9b4699858005bf0e626f053a 832 Gene3D G3DSA:3.30.870.10 23 153 1.1E-6 T 14-10-2018 AMIS_5440 b34eef68efe89065bf83793ce5a8e04e 596 Pfam PF11350 Protein of unknown function (DUF3152) 411 575 1.3E-37 T 14-10-2018 IPR022603 Domain of unknown function DUF3152 AMIS_5440 b34eef68efe89065bf83793ce5a8e04e 596 SUPERFAMILY SSF55486 450 578 3.67E-13 T 14-10-2018 AMIS_34700 9a3c9e972c57880d0962fb86516f14e3 341 SUPERFAMILY SSF102114 13 295 3.79E-30 T 14-10-2018 AMIS_34700 9a3c9e972c57880d0962fb86516f14e3 341 Gene3D G3DSA:3.20.20.70 8 295 2.2E-26 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_34700 9a3c9e972c57880d0962fb86516f14e3 341 PIRSF PIRSF004762 6 340 6.5E-55 T 14-10-2018 AMIS_39780 e3a1a4ca1c4023259dbe5de6f03830fe 260 Pfam PF03824 High-affinity nickel-transport protein 23 151 8.7E-13 T 14-10-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 AMIS_13760 45d5bc627b4f880ec88157070d04bc99 386 Pfam PF11203 Putative type VII ESX secretion system translocon, EccE 194 290 7.1E-19 T 14-10-2018 IPR021368 Type VII secretion system protein EccE AMIS_75690 efc39cb2ac4968d24fa1bd9f662fd5ca 214 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 84 113 7.9E-8 T 14-10-2018 IPR019933 DivIVA domain AMIS_48700 a7f5cb836a74e85cecd9b1a13fb17b1d 400 Pfam PF02687 FtsX-like permease family 308 393 3.0E-7 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AMIS_48700 a7f5cb836a74e85cecd9b1a13fb17b1d 400 Pfam PF12704 MacB-like periplasmic core domain 21 240 1.4E-38 T 14-10-2018 IPR025857 MacB-like periplasmic core domain AMIS_53520 1d709ca1e3e8b48848e047fd129d02d4 327 Pfam PF13280 WYL domain 153 319 6.6E-29 T 14-10-2018 IPR026881 WYL domain AMIS_12480 f8e73415113227375c34b9950345374d 301 SUPERFAMILY SSF52980 196 290 1.18E-5 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AMIS_12480 f8e73415113227375c34b9950345374d 301 Gene3D G3DSA:3.40.960.10 188 293 1.0E-16 T 14-10-2018 AMIS_12480 f8e73415113227375c34b9950345374d 301 Pfam PF04480 Protein of unknown function (DUF559) 226 289 2.1E-11 T 14-10-2018 IPR007569 Protein of unknown function DUF559 AMIS_60410 f3db74cff8607e78e5557244103b4b9a 176 SUPERFAMILY SSF160631 4 139 2.35E-6 T 14-10-2018 AMIS_3600 b23ba3b53934530a43c030676da416fc 555 Gene3D G3DSA:2.60.40.10 472 554 8.8E-16 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_3600 b23ba3b53934530a43c030676da416fc 555 Gene3D G3DSA:2.60.40.10 383 471 2.7E-6 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_26810 20b1b2be9ee701c717e2eca6e5a1664c 147 SUPERFAMILY SSF55620 59 131 8.89E-6 T 14-10-2018 AMIS_33520 7799697a584e611cbe8781de4f2d537a 100 Gene3D G3DSA:1.25.40.10 16 98 7.6E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_3130 ce8278ce0ec59277f4d67765d18085d0 158 Pfam PF10756 Bacterial PH domain 67 150 5.0E-8 T 14-10-2018 IPR019692 Protein of unknown function DUF2581 AMIS_79060 458529f2adfaf4f8ec5e76aab9edf433 366 SUPERFAMILY SSF55315 253 361 5.36E-5 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like AMIS_68640 32fe23e762118c4469a84c45243eeb5b 133 Pfam PF11298 Protein of unknown function (DUF3099) 7 80 7.1E-25 T 14-10-2018 IPR021449 Protein of unknown function DUF3099 AMIS_7690 c3715f355b19d2b0e311e74adaaf6c3c 431 Pfam PF01882 Protein of unknown function DUF58 198 286 2.1E-16 T 14-10-2018 IPR002881 Domain of unknown function DUF58 AMIS_42730 79222be97b3383c39e17326bd06e968a 251 Pfam PF09490 Probable cobalt transporter subunit (CbtA) 13 236 7.0E-68 T 14-10-2018 IPR012666 Cobalt transporter subunit CbtA, putative AMIS_41150 1ebd0cab5e35a897a7bcab107c9536c3 168 Pfam PF07681 DoxX 13 90 9.7E-11 T 14-10-2018 IPR032808 DoxX family AMIS_12170 93136bc882f2eb9be33df07f9c851c9f 359 ProDom PD120223 SCO3432 GENE ML2604 GP79 GP77 CGL2230 MB0190 181 359 9.0E-43 T 14-10-2018 AMIS_12170 93136bc882f2eb9be33df07f9c851c9f 359 Pfam PF10979 Protein of unknown function (DUF2786) 150 189 4.4E-16 T 14-10-2018 IPR024498 Domain of unknown function DUF2786 AMIS_7340 680d2a6ce981b6f6d628fbd3652dcc85 489 Pfam PF01554 MatE 229 382 1.2E-10 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AMIS_43350 1d280526521e8aa62e831bfa6aca3a16 226 SMART SM01012 168 219 0.0083 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 AMIS_50740 ad9e9efc352e32404597df08c34e9ab7 500 Pfam PF02447 GntP family permease 271 499 2.9E-79 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AMIS_50740 ad9e9efc352e32404597df08c34e9ab7 500 Pfam PF02447 GntP family permease 18 221 2.2E-56 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AMIS_50740 ad9e9efc352e32404597df08c34e9ab7 500 PIRSF PIRSF002746 12 500 1.3E-142 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AMIS_32970 987807e2a2328e8d6897964aa1f8d6e0 198 Pfam PF13376 Bacteriocin-protection, YdeI or OmpD-Associated 128 186 1.1E-20 T 14-10-2018 AMIS_39140 860fa5126f664e4613a8fa72f2ec641c 88 Pfam PF11239 Protein of unknown function (DUF3040) 1 79 7.2E-16 T 14-10-2018 IPR021401 Protein of unknown function DUF3040 AMIS_55800 e1ed52cdc27774c10820d4ed7900ecff 249 SUPERFAMILY SSF51735 1 230 1.75E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily AMIS_55800 e1ed52cdc27774c10820d4ed7900ecff 249 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 2 93 1.3E-16 T 14-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal AMIS_40390 377716a863bc6f41a9c50896162a08bd 161 SUPERFAMILY SSF55144 6 119 2.88E-7 T 14-10-2018 IPR009097 Cyclic phosphodiesterase AMIS_68310 d756360e9b61b16b217b24bd54d2ae41 193 Pfam PF11452 Protein of unknown function (DUF3000) 8 178 5.8E-68 T 14-10-2018 IPR021555 Protein of unknown function DUF3000 AMIS_77010 8dfc23ef23fa3e067d3cadd4f89783a9 370 Pfam PF13515 Fusaric acid resistance protein-like 25 146 2.3E-11 T 14-10-2018 AMIS_72520 44a587f1dda57975c4c90e459d4435ff 240 Pfam PF09335 SNARE associated Golgi protein 60 187 3.1E-25 T 14-10-2018 IPR032816 SNARE associated Golgi protein AMIS_79810 c8b94b9404146f7d69e0737d1cf87036 237 Gene3D G3DSA:2.60.40.10 40 116 3.8E-7 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_52250 130e7f736a9dabeb3877e54570ef0d4f 472 Pfam PF10009 Uncharacterized protein conserved in bacteria (DUF2252) 73 462 5.0E-140 T 14-10-2018 IPR018721 Protein of unknown function DUF2252 AMIS_23290 78601f509e35ceec4d01795c4c930c8c 294 Pfam PF03591 AzlC protein 8 139 2.7E-27 T 14-10-2018 IPR011606 Branched-chain amino acid transport, permease AMIS_19300 8b41ec48c09faf460b18b054971c3945 342 Pfam PF11271 Protein of unknown function (DUF3068) 7 313 2.3E-74 T 14-10-2018 IPR021424 Porin PorA AMIS_43180 bca33f841b5f8ca56b1346577ed44f01 329 Gene3D G3DSA:3.20.20.70 3 327 2.3E-120 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMIS_43180 bca33f841b5f8ca56b1346577ed44f01 329 Pfam PF03060 Nitronate monooxygenase 92 311 2.4E-33 T 14-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 AMIS_43180 bca33f841b5f8ca56b1346577ed44f01 329 Pfam PF03060 Nitronate monooxygenase 7 91 8.8E-19 T 14-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 AMIS_43180 bca33f841b5f8ca56b1346577ed44f01 329 SUPERFAMILY SSF51412 4 318 5.23E-68 T 14-10-2018 AMIS_30310 b942d6aa83dfdb72031337cdd50088ac 395 Pfam PF09594 Glycosyltransferase family 87 73 302 9.4E-47 T 14-10-2018 IPR018584 Glycosyltransferase family 87 GO:0016758 AMIS_56840 8c7514ab6b039657f7a8d43f486821d3 320 Pfam PF02653 Branched-chain amino acid transport system / permease component 23 291 1.0E-36 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 AMIS_49150 dca77920ad05ca8dbb8f32180c3cad12 239 Pfam PF10756 Bacterial PH domain 136 193 7.6E-9 T 14-10-2018 IPR019692 Protein of unknown function DUF2581 AMIS_49060 5b2e6ce9d3e809079dfc16f10aa4b3a7 387 SUPERFAMILY SSF48208 35 374 1.08E-28 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AMIS_49060 5b2e6ce9d3e809079dfc16f10aa4b3a7 387 Gene3D G3DSA:1.50.10.10 21 376 5.1E-21 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 AMIS_74390 f2d7a2c636e908576bae7b12e908d5a5 178 Pfam PF04138 GtrA-like protein 33 158 1.1E-24 T 14-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 AMIS_9910 1d61a47fdd83e665a783562f212e39fc 71 Pfam PF04149 Domain of unknown function (DUF397) 9 63 6.3E-22 T 14-10-2018 IPR007278 Domain of unknown function DUF397 AMIS_25790 51df899e7f813f924ad53d954932af4e 222 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 28 215 1.5E-26 T 14-10-2018 IPR006214 Bax inhibitor 1-related AMIS_14060 05c10ca52da311588771994226e4ff16 205 Pfam PF11241 Protein of unknown function (DUF3043) 39 202 1.2E-53 T 14-10-2018 IPR021403 Protein of unknown function DUF3043 AMIS_46560 c6b228c49371c3cefbacae7020b0eb19 221 Gene3D G3DSA:3.40.50.880 1 221 1.3E-29 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_46560 c6b228c49371c3cefbacae7020b0eb19 221 Pfam PF03575 Peptidase family S51 93 211 4.6E-13 T 14-10-2018 IPR005320 Peptidase S51 GO:0006508|GO:0008236 AMIS_46560 c6b228c49371c3cefbacae7020b0eb19 221 SUPERFAMILY SSF52317 3 216 5.04E-13 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like AMIS_48450 82da9c4def1fedd4fa780c8defcc3256 223 SUPERFAMILY SSF52540 17 213 5.15E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_48450 82da9c4def1fedd4fa780c8defcc3256 223 Gene3D G3DSA:3.40.50.300 7 214 2.6E-50 T 14-10-2018 AMIS_44340 269233047b586bdf474b5de7b09be76d 296 Pfam PF01435 Peptidase family M48 119 183 8.1E-9 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AMIS_44340 269233047b586bdf474b5de7b09be76d 296 Gene3D G3DSA:3.30.2010.10 100 180 8.8E-7 T 14-10-2018 AMIS_56980 7dfc36e23d8e866f2efd11aa4f9c9c67 136 Pfam PF06271 RDD family 43 130 1.5E-9 T 14-10-2018 IPR010432 RDD AMIS_16940 b70bc68f89f567e8def384612a8623da 325 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 313 8.6E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMIS_16940 b70bc68f89f567e8def384612a8623da 325 SUPERFAMILY SSF161098 82 311 1.57E-52 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_16940 b70bc68f89f567e8def384612a8623da 325 Gene3D G3DSA:1.10.3720.10 78 321 9.7E-58 T 14-10-2018 IPR035906 MetI-like superfamily AMIS_1900 1c36202e82f0de1a0dcac24d8074af3c 535 Pfam PF05140 ResB-like family 36 523 3.8E-122 T 14-10-2018 IPR007816 ResB-like domain AMIS_65390 32f96e18c7bb1e2c01f346fa2d772e21 169 Pfam PF04978 Protein of unknown function (DUF664) 20 163 8.9E-32 T 14-10-2018 IPR007061 Protein of unknown function DUF664 AMIS_65390 32f96e18c7bb1e2c01f346fa2d772e21 169 SUPERFAMILY SSF109854 4 164 6.87E-37 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes AMIS_65390 32f96e18c7bb1e2c01f346fa2d772e21 169 Gene3D G3DSA:1.20.120.450 6 165 1.5E-32 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes AMIS_66090 ad5c71f417a4d2dea25616d2121e845e 263 Pfam PF01955 Adenosylcobinamide amidohydrolase 23 242 2.9E-46 T 14-10-2018 IPR002808 Adenosylcobinamide amidohydrolase, CbiZ AMIS_32910 ac84f893b1792f97d162868b2a7a281f 363 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 2 323 3.5E-57 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AMIS_61410 4f0854e0651b0c41b5127d448cf6d5f0 128 Pfam PF06993 Protein of unknown function (DUF1304) 14 125 3.5E-24 T 14-10-2018 IPR009732 Protein of unknown function DUF1304 AMIS_64350 80d79af85203632e85de18a7c69f164e 350 Pfam PF09949 Uncharacterized conserved protein (DUF2183) 206 302 6.4E-31 T 14-10-2018 IPR019236 Domain of unknown function DUF2183 AMIS_60420 837a4e1c08170b14bcbe3c0262d1c51f 183 Pfam PF14435 SUKH-4 immunity protein 11 179 3.7E-42 T 14-10-2018 IPR025851 SUKH-4 immunity protein AMIS_44660 e2823db952d8af2b9ae4101dc127d0a8 170 Pfam PF14081 Domain of unknown function (DUF4262) 33 155 1.5E-36 T 14-10-2018 IPR025358 Protein of unknown function DUF4262 AMIS_68940 f939c98aebe756094eb8f345de835aa5 624 SUPERFAMILY SSF50969 56 304 1.53E-9 T 14-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like AMIS_55670 2b1530374cac0a35c3182f9579b7f839 339 Pfam PF02653 Branched-chain amino acid transport system / permease component 41 310 5.0E-44 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 AMIS_62890 4db8c4344e3ed5259e893182c15a85d4 288 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 10 287 3.6E-52 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AMIS_12990 089403642d3a014f5a74c6d44e9dc694 309 SUPERFAMILY SSF63829 36 282 3.92E-17 T 14-10-2018 AMIS_12990 089403642d3a014f5a74c6d44e9dc694 309 Gene3D G3DSA:2.120.10.30 16 226 2.9E-11 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AMIS_6880 467a8829b8b5b27081a96de40e3c3297 128 Hamap MF_01479 Transcriptional regulator WhiB [whiB]. 1 102 17.845 T 14-10-2018 IPR003482 Transcription factor WhiB AMIS_6880 467a8829b8b5b27081a96de40e3c3297 128 Pfam PF02467 Transcription factor WhiB 17 87 1.1E-21 T 14-10-2018 IPR034768 WhiB-like iron-sulfur binding domain AMIS_63270 5a463b99a3b251b9727b816ad4738740 345 Pfam PF02653 Branched-chain amino acid transport system / permease component 37 298 3.4E-37 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 AMIS_48470 daf4fcfc49927e25f2086b0f4c1fe761 101 Pfam PF05598 Transposase domain (DUF772) 36 78 6.0E-10 T 14-10-2018 IPR008490 Transposase InsH, N-terminal AMIS_58630 52b11b30aefc003423a8dd3b5da1ba3f 930 Gene3D G3DSA:3.40.50.300 281 433 1.5E-6 T 14-10-2018 AMIS_58630 52b11b30aefc003423a8dd3b5da1ba3f 930 SUPERFAMILY SSF52540 286 426 6.0E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_10440 3cada69aaa12121b65af3acffbffb6bc 321 Pfam PF03707 Bacterial signalling protein N terminal repeat 121 174 1.7E-13 T 14-10-2018 IPR005330 MHYT domain AMIS_10440 3cada69aaa12121b65af3acffbffb6bc 321 Pfam PF03707 Bacterial signalling protein N terminal repeat 184 236 2.4E-8 T 14-10-2018 IPR005330 MHYT domain AMIS_10440 3cada69aaa12121b65af3acffbffb6bc 321 Pfam PF03707 Bacterial signalling protein N terminal repeat 57 116 7.0E-16 T 14-10-2018 IPR005330 MHYT domain AMIS_14200 4d6f454ffb709c9afb4de1af6f50d5fa 307 Pfam PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) 41 278 8.4E-78 T 14-10-2018 IPR019108 Cytochrome c oxidase caa3-type, assembly factor CtaG-related AMIS_61730 b77b5f025005fb44dcc0bc2e8988691e 1097 Pfam PF13569 Domain of unknown function (DUF4132) 831 1010 5.0E-51 T 14-10-2018 IPR025406 Domain of unknown function DUF4132 AMIS_13310 1b1bc356cf840818a3ba2439bc72bc41 68 Pfam PF11755 Protein of unknown function (DUF3311) 13 65 8.1E-13 T 14-10-2018 IPR021741 Protein of unknown function DUF3311 AMIS_42040 e48e2076192c82ffbc1aeba4b0f2ff2c 213 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 16 161 2.4E-9 T 14-10-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system AMIS_28610 4305b34a16fcd94a13d9efaf143f40e1 378 Pfam PF00487 Fatty acid desaturase 113 334 1.2E-27 T 14-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 AMIS_15750 55f05c01285d3b4a00d0cf0d69438c42 290 Pfam PF03729 Short repeat of unknown function (DUF308) 60 126 5.2E-5 T 14-10-2018 IPR005325 Protein of unknown function DUF308, membrane AMIS_3940 0e8b3e07419213a8d867ae9930b43243 98 PIRSF PIRSF006909 1 98 2.9E-46 T 14-10-2018 IPR014447 Uncharacterised conserved protein UCP006909 AMIS_80640 547415439435a571b7a12ca9ab255235 338 Pfam PF13830 Domain of unknown function (DUF4192) 12 319 4.1E-79 T 14-10-2018 IPR025447 Protein of unknown function DUF4192 AMIS_24480 d656d91d079267b7ca25c884729175a2 255 Pfam PF14100 Methane oxygenase PmoA 108 189 4.9E-11 T 14-10-2018 IPR029475 Methane oxygenase PmoA AMIS_54720 ace9875fa0e3cdebeba9c41a9a8adea5 214 Pfam PF11937 Protein of unknown function (DUF3455) 75 210 4.1E-21 T 14-10-2018 IPR021851 Protein of unknown function DUF3455 AMIS_38630 e3926829ff6ab4c60ebfe00eca9978fd 425 Pfam PF12704 MacB-like periplasmic core domain 26 264 1.4E-7 T 14-10-2018 IPR025857 MacB-like periplasmic core domain AMIS_10990 4abad6f51deef6b374e2996bee1e3ee2 183 Gene3D G3DSA:3.30.40.60 68 152 5.4E-20 T 14-10-2018 AMIS_10990 4abad6f51deef6b374e2996bee1e3ee2 183 Pfam PF14279 HNH endonuclease 91 138 7.8E-14 T 14-10-2018 IPR029471 HNH endonuclease 5 AMIS_10990 4abad6f51deef6b374e2996bee1e3ee2 183 SMART SM00507 78 127 1.2E-11 T 14-10-2018 IPR003615 HNH nuclease AMIS_74400 7f2e20184435738a910b29207d96b08c 185 Pfam PF04138 GtrA-like protein 21 140 6.3E-18 T 14-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 AMIS_58580 b5bf48c9e52a43619b583abbb8da9b08 444 Pfam PF02386 Cation transport protein 39 424 1.1E-59 T 14-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 AMIS_35710 d5cb6f8a259b24a35f344ec0af492eec 478 Pfam PF07690 Major Facilitator Superfamily 16 409 2.9E-38 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMIS_35710 d5cb6f8a259b24a35f344ec0af492eec 478 SUPERFAMILY SSF103473 7 467 1.22E-50 T 14-10-2018 IPR036259 MFS transporter superfamily AMIS_35710 d5cb6f8a259b24a35f344ec0af492eec 478 Gene3D G3DSA:1.20.1250.20 5 189 8.1E-31 T 14-10-2018 AMIS_35710 d5cb6f8a259b24a35f344ec0af492eec 478 Gene3D G3DSA:1.20.1250.20 190 431 1.8E-16 T 14-10-2018 AMIS_53410 1fbb52abafc1fb0bda3f91cc48c0d2df 126 SUPERFAMILY SSF54593 18 112 6.94E-9 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_53410 1fbb52abafc1fb0bda3f91cc48c0d2df 126 Gene3D G3DSA:3.10.180.10 1 126 3.2E-28 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMIS_14010 5979d78126155e31aaf6c02447a5715d 266 Pfam PF06182 ABC-2 family transporter protein 36 265 7.3E-44 T 14-10-2018 IPR010390 Protein of unknown function DUF990 AMIS_66260 0ecef9739657993ab92fc41bd81cb55e 172 SUPERFAMILY SSF160631 15 90 4.58E-5 T 14-10-2018 AMIS_24430 b0f48054f4c96b05fa35febf8140d20d 66 SUPERFAMILY SSF109854 6 55 4.58E-5 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes AMIS_29290 575fd1c44365b79aea7ed096d7623e8e 631 Pfam PF02687 FtsX-like permease family 530 621 1.6E-8 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AMIS_29290 575fd1c44365b79aea7ed096d7623e8e 631 Pfam PF02687 FtsX-like permease family 95 190 1.3E-7 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AMIS_53920 194f436cb266f6edce8b7ccc11f7e4ff 271 TIGRFAM TIGR03843 TIGR03843: conserved hypothetical protein 19 271 1.4E-106 T 14-10-2018 IPR022292 Conserved hypothetical protein CHP03843 AMIS_71590 ba560193ec46812e0569b1650dbdf528 319 Pfam PF13338 Transcriptional regulator, AbiEi antitoxin 7 49 6.5E-8 T 14-10-2018 IPR025159 Transcriptional regulator, AbiEi antitoxin AMIS_70020 5048e9eb5159b0582bc6795893623c94 429 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 44 75 7.6E-10 T 14-10-2018 IPR019933 DivIVA domain AMIS_70020 5048e9eb5159b0582bc6795893623c94 429 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 6 33 8.5E-10 T 14-10-2018 IPR019933 DivIVA domain AMIS_65060 999d47188f83ce81a34a76a4e27657c2 354 Pfam PF06030 Bacterial protein of unknown function (DUF916) 53 153 2.4E-8 T 14-10-2018 IPR010317 Protein of unknown function DUF916, cell surface putative AMIS_40050 03cd17bbb8390a709fc237cf48ccea4a 580 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 241 540 2.0E-91 T 14-10-2018 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal AMIS_14300 ac96d649b784f1f046bdf2dee0eb00e3 452 Pfam PF05991 YacP-like NYN domain 332 450 8.8E-21 T 14-10-2018 IPR010298 Protein of unknown function DUF901 AMIS_55510 5d3a6456e381f8d12246bbca6862494a 365 Gene3D G3DSA:3.20.20.80 21 365 2.3E-116 T 14-10-2018 AMIS_55510 5d3a6456e381f8d12246bbca6862494a 365 Pfam PF07745 Glycosyl hydrolase family 53 30 359 2.5E-100 T 14-10-2018 IPR011683 Glycosyl hydrolase family 53 GO:0015926 AMIS_55510 5d3a6456e381f8d12246bbca6862494a 365 SUPERFAMILY SSF51445 27 365 2.44E-77 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily AMIS_15390 10d100371263b62de874a915f7facf17 209 Pfam PF10821 Protein of unknown function (DUF2567) 24 130 2.8E-8 T 14-10-2018 IPR021213 Protein of unknown function DUF2567 AMIS_50920 376affd657186b32441b92701600df36 457 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 9 297 1.2E-30 T 14-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD AMIS_56850 4de0d249d812fa0e5b81f09c554f19e1 286 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 273 4.4E-30 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 AMIS_79220 42e7f02d3bbb80593e6d07037e8f9d6f 265 SUPERFAMILY SSF49319 29 157 2.22E-15 T 14-10-2018 IPR027273 Neocarzinostatin-like AMIS_11960 bd573782fafc860e5bc72b099b047013 267 Pfam PF02361 Cobalt transport protein 14 225 1.1E-26 T 14-10-2018 IPR003339 ABC/ECF transporter, transmembrane component AMIS_68100 03802185e051dacc74eb65cf4ded735c 122 Pfam PF11236 Protein of unknown function (DUF3037) 7 121 3.8E-41 T 14-10-2018 IPR021398 Protein of unknown function DUF3037 AMIS_45500 90aebda78ced2cd4a63db61362e83143 293 Gene3D G3DSA:1.10.357.140 18 159 1.8E-12 T 14-10-2018 AMIS_45500 90aebda78ced2cd4a63db61362e83143 293 Pfam PF01040 UbiA prenyltransferase family 28 182 1.9E-15 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 AMIS_26900 6852345e38a666ea2df3ff296c4e04ce 210 Pfam PF09335 SNARE associated Golgi protein 36 161 1.6E-20 T 14-10-2018 IPR032816 SNARE associated Golgi protein AMIS_37480 187294cd52c850a37e922144a56cca21 352 Pfam PF02653 Branched-chain amino acid transport system / permease component 55 337 5.3E-35 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 AMIS_80820 e587108ca1582e1d3407ff5f511ff976 415 Pfam PF09594 Glycosyltransferase family 87 148 375 6.0E-15 T 14-10-2018 IPR018584 Glycosyltransferase family 87 GO:0016758 AMIS_46930 cbd90d5ba8d6f5ed35d37992751ae568 143 Pfam PF09828 Chromate resistance exported protein 3 131 1.3E-50 T 14-10-2018 IPR018634 Chromate resistance exported protein AMIS_4420 3ad43a1a01de7641d61ba2be5b819105 518 SUPERFAMILY SSF53756 165 416 1.57E-7 T 14-10-2018 AMIS_100 ffe5ebc36a01ffce637ddaf2e60172b5 234 Pfam PF12089 Transmembrane domain of unknown function (DUF3566) 111 232 6.2E-42 T 14-10-2018 IPR021949 Domain of unknown function DUF3566. transmembrane AMIS_36640 56e6673d86aefeeed026dcfc19e1a012 181 Pfam PF16945 Putative lactococcus lactis phage r1t holin 74 124 2.4E-6 T 14-10-2018 IPR020109 Holin, r1t-type AMIS_16370 bd3c99aea328a16fadb6e575a2313684 200 Pfam PF01810 LysE type translocator 16 199 3.0E-15 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AMIS_37910 d301dfbc9172c6d5fab3f2d319f536d1 126 Pfam PF04248 Domain of unknown function (DUF427) 25 116 6.8E-31 T 14-10-2018 IPR007361 Domain of unknown function DUF427 AMIS_37910 d301dfbc9172c6d5fab3f2d319f536d1 126 Gene3D G3DSA:2.170.150.40 10 122 9.9E-38 T 14-10-2018 AMIS_40380 0e537abfc0f34c6870481701f0ea8ee7 460 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 24 382 1.1E-99 T 14-10-2018 IPR003846 Uncharacterised protein family UPF0061 AMIS_40380 0e537abfc0f34c6870481701f0ea8ee7 460 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 1 445 39.985 T 14-10-2018 IPR003846 Uncharacterised protein family UPF0061 AMIS_53370 be7be98a604ef8b1b2328dfaa45c1e18 413 Pfam PF12006 Protein of unknown function (DUF3500) 43 408 6.3E-94 T 14-10-2018 IPR021889 Protein of unknown function DUF3500 AMIS_63260 ac9240e4a4d882cdbbca33f5aebfb464 295 Pfam PF02653 Branched-chain amino acid transport system / permease component 11 277 3.6E-30 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 AMIS_63990 2b808acdfd6e02ae107f6e28527c2c84 99 SUPERFAMILY SSF48452 32 87 1.01E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMIS_27850 2a8f87558f88ff2fdea7a9386455f7c7 186 Pfam PF06271 RDD family 43 151 1.0E-5 T 14-10-2018 IPR010432 RDD AMIS_8720 ed9970b8ba130a2ccbb79c8269435a19 69 Pfam PF04149 Domain of unknown function (DUF397) 9 60 2.4E-23 T 14-10-2018 IPR007278 Domain of unknown function DUF397 AMIS_67890 c9537e4d49b5553aee744eb81627fe26 266 Gene3D G3DSA:1.10.10.1320 13 73 4.2E-10 T 14-10-2018 AMIS_25280 8a4ddc82c921a7cfcdf860a031ac3f2f 395 Gene3D G3DSA:2.60.40.10 307 394 9.7E-14 T 14-10-2018 IPR013783 Immunoglobulin-like fold AMIS_6630 de2f90ba0e2689214172b93a29782828 109 Pfam PF10824 Excreted virulence factor EspC, type VII ESX diderm 13 104 1.8E-6 T 14-10-2018 IPR022536 ESX-1 secretion-associated protein EspC GO:0009306 AMIS_50 a2cce5c55d084e8b2e9543648978aa8f 274 Pfam PF05258 Protein of unknown function (DUF721) 163 249 2.3E-27 T 14-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 AMIS_6820 4cbe714267964a79215088985d3ede13 418 Pfam PF02653 Branched-chain amino acid transport system / permease component 65 402 1.2E-39 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 AMIS_20900 b91bdb7da2e2e090c06fc0f576c0e975 119 Pfam PF09956 Uncharacterized conserved protein (DUF2190) 9 112 1.2E-5 T 14-10-2018 IPR011231 Bacteriophage VT1-Sakai, H0018 AMIS_70690 01f564f8317659ac5bdaf76de45836ad 200 Pfam PF02620 Uncharacterized ACR, COG1399 71 182 3.1E-30 T 14-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD AMIS_77000 808bd6c10ef148731dce75bb1c700d15 565 Pfam PF13367 Protease prsW family 117 318 2.0E-47 T 14-10-2018 IPR026898 Protease PrsW GO:0008233 AMIS_26830 52195f4a319210259b763f008c487c5f 199 Pfam PF09335 SNARE associated Golgi protein 34 152 6.6E-16 T 14-10-2018 IPR032816 SNARE associated Golgi protein AMIS_65170 44f63550dc66b193acddbfd25d223866 530 Pfam PF01926 50S ribosome-binding GTPase 40 137 8.4E-5 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 AMIS_65170 44f63550dc66b193acddbfd25d223866 530 SUPERFAMILY SSF52540 38 177 1.11E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMIS_65170 44f63550dc66b193acddbfd25d223866 530 Gene3D G3DSA:3.40.50.300 35 194 2.5E-9 T 14-10-2018 AMIS_30570 e984c32d09efd75fb8ec2dbbc4e206c7 241 Pfam PF11139 Sap, sulfolipid-1-addressing protein 26 235 2.7E-47 T 14-10-2018 IPR021315 Glycolipid exporter Gap/Sap AMIS_26920 c7f796d37a783db307018f8a13fd4e3f 364 Pfam PF01594 AI-2E family transporter 24 343 1.3E-57 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like AMIS_46820 770eba2d4f3389aa1d5928ce7cb80c9b 439 Pfam PF02687 FtsX-like permease family 85 173 2.9E-6 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AMIS_28720 c4c7ad9aa4f4d561858b753f423d1d9d 272 Gene3D G3DSA:3.80.10.10 47 251 8.5E-14 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily AMIS_51610 9e96a85beaea8cb4d4b5962a0cb42e0a 147 SUPERFAMILY SSF54495 68 116 9.78E-8 T 14-10-2018 IPR016135 Ubiquitin-conjugating enzyme/RWD-like AMIS_69230 5df3d813d70073539a334ed1faec5864 286 Pfam PF04012 PspA/IM30 family 3 242 1.0E-44 T 14-10-2018 IPR007157 PspA/IM30 AMIS_52040 47c27713fe9a4612e8e77f8a4686abaa 463 Pfam PF14224 Domain of unknown function (DUF4331) 2 455 3.4E-146 T 14-10-2018 IPR025566 Protein of unknown function DUF4331 AMIS_76420 086a4721cf977243786e1636d1bef6bf 155 Pfam PF03748 Flagellar basal body-associated protein FliL 62 155 8.5E-13 T 14-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 AMIS_30070 27c20378a2164c26f88a4ffc5ce21fef 195 Pfam PF04972 BON domain 23 88 8.2E-14 T 14-10-2018 IPR007055 BON domain AMIS_50020 7da8dca3341d54fd61ca92282406407d 296 Pfam PF01435 Peptidase family M48 124 191 4.2E-11 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AMIS_50020 7da8dca3341d54fd61ca92282406407d 296 Gene3D G3DSA:3.30.2010.10 97 185 1.1E-8 T 14-10-2018 AMIS_56190 0373a783ac53caf6a659597a9dc05533 200 Pfam PF14273 Domain of unknown function (DUF4360) 21 199 4.4E-65 T 14-10-2018 IPR025649 Protein of unknown function DUF4360 AMIS_23250 192577f0c953f42e7da842afa6ce9215 154 Pfam PF03780 Asp23 family, cell envelope-related function 40 150 1.0E-14 T 14-10-2018 IPR005531 Alkaline shock protein Asp23 AMIS_4620 921f46235422457b8621281f367de8a9 220 Pfam PF09335 SNARE associated Golgi protein 40 164 7.4E-22 T 14-10-2018 IPR032816 SNARE associated Golgi protein AMIS_40600 c151fde106b8cceae6d80cd06d49242d 439 Pfam PF01882 Protein of unknown function DUF58 192 277 4.3E-20 T 14-10-2018 IPR002881 Domain of unknown function DUF58 AMIS_56200 1a2cad7c605466ea9ff5064782130ad0 467 Pfam PF07907 YibE/F-like protein 143 381 2.9E-70 T 14-10-2018 IPR012507 YibE/F-like AMIS_3950 7f777de640778e6925a0d5f92cd3b77d 244 Pfam PF14014 Protein of unknown function (DUF4230) 82 239 4.8E-34 T 14-10-2018 IPR025324 Protein of unknown function DUF4230 AMIS_55310 f05696f65a98c977999fba63868948bb 394 Pfam PF00487 Fatty acid desaturase 73 350 1.4E-28 T 14-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 AMIS_22580 a9066ea7bf9b6cc594fb53ab78e43709 359 Pfam PF11991 Tryptophan dimethylallyltransferase 34 302 2.1E-18 T 14-10-2018 IPR017795 Aromatic prenyltransferase, DMATS-type GO:0009820|GO:0016765 AMIS_52130 e10c35ed3d3a36e749e84fc1792e26e8 282 Pfam PF07987 Domain of unkown function (DUF1775) 27 150 1.7E-14 T 14-10-2018 IPR012533 YcnI-like AMIS_52130 e10c35ed3d3a36e749e84fc1792e26e8 282 Gene3D G3DSA:2.60.40.2230 24 177 1.1E-14 T 14-10-2018 IPR038507 YcnI-like superfamily AMIS_42020 1ce666ba0f175c498ce29aff38af3de9 218 Pfam PF10127 Predicted nucleotidyltransferase 6 210 1.5E-41 T 14-10-2018 IPR018775 Nucleotidyltransferase, predicted AMIS_26910 aac547246997cb56694cb75141dee0c2 411 Pfam PF00999 Sodium/hydrogen exchanger family 4 388 7.7E-32 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AMIS_28810 a523dcd79fb8740fb34ee3bdd223c4f5 308 Pfam PF08345 Flagellar M-ring protein C-terminal 71 198 7.8E-18 T 14-10-2018 IPR013556 Flagellar M-ring C-terminal AMIS_36930 19a1f1e3c57be41f512befbc8db36639 371 Pfam PF07070 SpoOM protein 3 218 9.3E-82 T 14-10-2018 IPR009776 Sporulation stage 0, protein M AMIS_68490 7dde75786ce97b313d963389a51bb91d 121 PIRSF PIRSF006910 2 120 7.6E-43 T 14-10-2018 IPR016499 Nucleic acid binding protein, Rv2694c, predicted AMIS_1430 0fb1f055e257924625c35f4df1a01e18 82 SUPERFAMILY SSF103647 20 71 4.05E-7 T 14-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 AMIS_75400 92368879a5092a6316d4e4c30b8c1cef 295 Pfam PF12705 PD-(D/E)XK nuclease superfamily 30 276 1.0E-31 T 14-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type AMIS_20100 baab561fb83a9a763bd95717a1143286 197 Pfam PF03235 Protein of unknown function DUF262 26 110 1.9E-13 T 14-10-2018 IPR004919 Domain of unknown function DUF262 AMIS_2410 308d5e5d67fa4d587801c41680abde5b 646 Pfam PF10145 Phage-related minor tail protein 96 294 1.4E-18 T 14-10-2018 IPR010090 Phage tail tape measure protein AMIS_61870 c21e88910cb6d4036f6795437e9486bb 148 Pfam PF10756 Bacterial PH domain 70 139 7.8E-16 T 14-10-2018 IPR019692 Protein of unknown function DUF2581 AMIS_17740 aa4dbc25bc078e6d3fb4d53e59957f73 153 Pfam PF06271 RDD family 5 130 2.0E-21 T 14-10-2018 IPR010432 RDD AMIS_77300 bd5771e9fd11ee950879549f7b085c86 384 Pfam PF01757 Acyltransferase family 37 355 1.0E-22 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 AMIS_48570 7ad29827cf2299714a0fda3adc10766a 329 Pfam PF02653 Branched-chain amino acid transport system / permease component 39 317 5.6E-48 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 AMIS_78250 ef7a362234a70c66562a5f6d4b9262fa 51 Pfam PF13783 Domain of unknown function (DUF4177) 4 37 6.2E-6 T 14-10-2018 IPR025234 Protein of unknown function DUF4177 AMIS_76670 95f4236d29cff9f362e38c68259c4be7 104 Pfam PF10724 Protein of unknown function (DUF2516) 12 100 4.4E-26 T 14-10-2018 IPR019662 Protein of unknown function DUF2516 AMIS_22790 18d44a08e646bf58ea61e028e3fb6b32 373 Pfam PF06626 Protein of unknown function (DUF1152) 4 283 1.7E-80 T 14-10-2018 IPR010581 Protein of unknown function DUF1152 AMIS_3200 cbdf4b4545252d73e7640cfc6cd1a520 61 Pfam PF14029 Protein of unknown function (DUF4244) 10 61 2.8E-25 T 14-10-2018 IPR025338 Protein of unknown function DUF4244 AMIS_76640 eec3033e93615a47794ec60fcc5f5b44 259 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 15 233 5.5E-30 T 14-10-2018 AMIS_46160 e4f8fa4b8790cadc380eece78530b9d5 69 Pfam PF08044 Domain of unknown function (DUF1707) 1 34 1.3E-7 T 14-10-2018 IPR012551 Protein of unknown function DUF1707 AMIS_49600 b27e93705f65fdfa5b8a136d682a6c85 89 Pfam PF10041 Uncharacterized conserved protein (DUF2277) 2 78 1.7E-36 T 14-10-2018 IPR018735 Protein of unknown function DUF2277 AMIS_20530 f73e7f02a41894621bc0b157ffd7b5c7 696 Gene3D G3DSA:3.40.50.300 290 591 1.2E-12 T 14-10-2018 AMIS_7310 c9ae2cf878d0bf499852dba2403293b6 192 Pfam PF14081 Domain of unknown function (DUF4262) 27 152 1.9E-32 T 14-10-2018 IPR025358 Protein of unknown function DUF4262