locus-tag class description L3i22_000010 PF00308 Bacterial dnaA protein L3i22_000010 PF08299 Bacterial dnaA protein helix-turn-helix L3i22_000020 PF00712 DNA polymerase III beta subunit, N-terminal domain L3i22_000020 PF02767 DNA polymerase III beta subunit, central domain L3i22_000020 PF02768 DNA polymerase III beta subunit, C-terminal domain L3i22_000030 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain L3i22_000030 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase L3i22_000040 PF02463 RecF/RecN/SMC N terminal domain L3i22_000050 PF05258 Dna[CI] antecedent, DciA L3i22_000080 PF00204 DNA gyrase B L3i22_000080 PF00986 DNA gyrase B subunit, carboxyl terminus L3i22_000080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_000080 PF01751 Toprim domain L3i22_000090 PF00521 DNA gyrase/topoisomerase IV, subunit A L3i22_000090 PF03989 DNA gyrase C-terminal domain, beta-propeller L3i22_000110 PF12089 Transmembrane domain of unknown function (DUF3566) L3i22_000140 PF00293 NUDIX domain L3i22_000140 PF09297 NADH pyrophosphatase zinc ribbon domain L3i22_000170 PF01323 DSBA-like thioredoxin domain L3i22_000180 PF02657 Fe-S metabolism associated domain L3i22_000200 PF03129 Anticodon binding domain L3i22_000200 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) L3i22_000200 PF04073 Aminoacyl-tRNA editing domain L3i22_000220 PF00581 Rhodanese-like domain L3i22_000230 PF00183 Hsp90 protein L3i22_000280 PF02770 Acyl-CoA dehydrogenase, middle domain L3i22_000280 PF00441 Acyl-CoA dehydrogenase, C-terminal domain L3i22_000280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain L3i22_000290 PF00196 Bacterial regulatory proteins, luxR family L3i22_000300 PF01047 MarR family L3i22_000310 PF04264 YceI-like domain L3i22_000390 PF03808 Glycosyl transferase WecB/TagA/CpsF family L3i22_000400 PF00498 FHA domain L3i22_000400 PF12401 Protein of unknown function (DUF2662) L3i22_000400 PF00498 FHA domain L3i22_000400 PF12401 Protein of unknown function (DUF2662) L3i22_000410 PF16697 Inner membrane component of T3SS, cytoplasmic domain L3i22_000430 PF01098 Cell cycle protein L3i22_000440 PF00905 Penicillin binding protein transpeptidase domain L3i22_000450 PF00069 Protein kinase domain L3i22_000460 PF03793 PASTA domain L3i22_000460 PF00069 Protein kinase domain L3i22_000470 PF00117 Glutamine amidotransferase class-I L3i22_000510 PF06781 Cell division protein CrgA L3i22_000520 PF13183 4Fe-4S dicluster domain L3i22_000520 PF02754 Cysteine-rich domain L3i22_000540 PF00571 CBS domain L3i22_000540 PF03471 Transporter associated domain L3i22_000540 PF01595 Cyclin M transmembrane N-terminal domain L3i22_000550 PF00571 CBS domain L3i22_000550 PF01595 Cyclin M transmembrane N-terminal domain L3i22_000580 PF00692 dUTPase L3i22_000590 PF08241 Methyltransferase domain L3i22_000630 PF13581 Histidine kinase-like ATPase domain L3i22_000630 PF08448 PAS fold L3i22_000630 PF07228 Stage II sporulation protein E (SpoIIE) L3i22_000630 PF13466 STAS domain L3i22_000650 PF02770 Acyl-CoA dehydrogenase, middle domain L3i22_000650 PF02771 Acyl-CoA dehydrogenase, N-terminal domain L3i22_000650 PF00441 Acyl-CoA dehydrogenase, C-terminal domain L3i22_000650 PF12806 Acetyl-CoA dehydrogenase C-terminal like L3i22_000690 PF03006 Haemolysin-III related L3i22_000700 PF03746 LamB/YcsF family L3i22_000710 PF17991 Thioredoxin like C-terminal domain L3i22_000710 PF00578 AhpC/TSA family L3i22_000710 PF02683 Cytochrome C biogenesis protein transmembrane region L3i22_000780 PF02817 e3 binding domain L3i22_000780 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) L3i22_000780 PF00364 Biotin-requiring enzyme L3i22_000790 PF02779 Transketolase, pyrimidine binding domain L3i22_000790 PF02780 Transketolase, C-terminal domain L3i22_000800 PF00676 Dehydrogenase E1 component L3i22_000850 PF00012 Hsp70 protein L3i22_000860 PF01025 GrpE L3i22_000870 PF00684 DnaJ central domain L3i22_000870 PF01556 DnaJ C terminal domain L3i22_000870 PF00226 DnaJ domain L3i22_000880 PF13411 MerR HTH family regulatory protein L3i22_000900 PF00999 Sodium/hydrogen exchanger family L3i22_000900 PF02254 TrkA-N domain L3i22_000920 PF07690 Major Facilitator Superfamily L3i22_000930 PF07724 AAA domain (Cdc48 subfamily) L3i22_000930 PF00004 ATPase family associated with various cellular activities (AAA) L3i22_000930 PF10431 C-terminal, D2-small domain, of ClpB protein L3i22_000930 PF17871 AAA lid domain L3i22_000930 PF02861 Clp amino terminal domain, pathogenicity island component L3i22_000960 PF01022 Bacterial regulatory protein, arsR family L3i22_000970 PF00596 Class II Aldolase and Adducin N-terminal domain L3i22_000980 PF09335 SNARE associated Golgi protein L3i22_000990 PF00149 Calcineurin-like phosphoesterase L3i22_001010 PF04545 Sigma-70, region 4 L3i22_001010 PF04542 Sigma-70 region 2 L3i22_001040 PF01116 Fructose-bisphosphate aldolase class-II L3i22_001120 PF00709 Adenylosuccinate synthetase L3i22_001130 PF02843 Phosphoribosylglycinamide synthetase, C domain L3i22_001130 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain L3i22_001130 PF02844 Phosphoribosylglycinamide synthetase, N domain L3i22_001180 PF10397 Adenylosuccinate lyase C-terminus L3i22_001180 PF00206 Lyase L3i22_001190 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase L3i22_001210 PF00586 AIR synthase related protein, N-terminal domain L3i22_001210 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain L3i22_001210 PF02769 AIR synthase related protein, C-terminal domain L3i22_001240 PF00156 Phosphoribosyl transferase domain L3i22_001250 PF02769 AIR synthase related protein, C-terminal domain L3i22_001250 PF00586 AIR synthase related protein, N-terminal domain L3i22_001260 PF04055 Radical SAM superfamily L3i22_001290 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain L3i22_001290 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase L3i22_001330 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family L3i22_001370 PF03061 Thioesterase superfamily L3i22_001420 PF00459 Inositol monophosphatase family L3i22_001440 PF00293 NUDIX domain L3i22_001450 PF01593 Flavin containing amine oxidoreductase L3i22_001460 PF00348 Polyprenyl synthetase L3i22_001480 PF03441 FAD binding domain of DNA photolyase L3i22_001480 PF00875 DNA photolyase L3i22_001490 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain L3i22_001490 PF07992 Pyridine nucleotide-disulphide oxidoreductase L3i22_001500 PF08281 Sigma-70, region 4 L3i22_001500 PF04542 Sigma-70 region 2 L3i22_001510 PF00069 Protein kinase domain L3i22_001580 PF01741 Large-conductance mechanosensitive channel, MscL L3i22_001600 PF08678 Rsbr N terminal L3i22_001600 PF01740 STAS domain L3i22_001610 PF01740 STAS domain L3i22_001620 PF13581 Histidine kinase-like ATPase domain L3i22_001640 PF00072 Response regulator receiver domain L3i22_001640 PF00512 His Kinase A (phospho-acceptor) domain L3i22_001640 PF09456 RcsC Alpha-Beta-Loop (ABL) L3i22_001640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_001650 PF00072 Response regulator receiver domain L3i22_001650 PF00486 Transcriptional regulatory protein, C terminal L3i22_001670 PF00005 ABC transporter L3i22_001710 PF00326 Prolyl oligopeptidase family L3i22_001710 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain L3i22_001760 PF01872 RibD C-terminal domain L3i22_001770 PF01872 RibD C-terminal domain L3i22_001790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_001790 PF00072 Response regulator receiver domain L3i22_001790 PF00512 His Kinase A (phospho-acceptor) domain L3i22_001790 PF09308 LuxQ, periplasmic L3i22_001800 PF00072 Response regulator receiver domain L3i22_001800 PF00486 Transcriptional regulatory protein, C terminal L3i22_001810 PF03211 Pectate lyase L3i22_001840 PF01740 STAS domain L3i22_001850 PF00202 Aminotransferase class-III L3i22_001860 PF00300 Histidine phosphatase superfamily (branch 1) L3i22_001870 PF00578 AhpC/TSA family L3i22_001890 PF05140 ResB-like family L3i22_001900 PF01578 Cytochrome C assembly protein L3i22_001920 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase L3i22_001930 PF01040 UbiA prenyltransferase family L3i22_001940 PF08281 Sigma-70, region 4 L3i22_001940 PF04542 Sigma-70 region 2 L3i22_001960 PF02441 Flavoprotein L3i22_002010 PF00270 DEAD/DEAH box helicase L3i22_002010 PF00271 Helicase conserved C-terminal domain L3i22_002050 PF00877 NlpC/P60 family L3i22_002060 PF04055 Radical SAM superfamily L3i22_002090 PF01497 Periplasmic binding protein L3i22_002100 PF01032 FecCD transport family L3i22_002110 PF00005 ABC transporter L3i22_002120 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily L3i22_002120 PF18029 Glyoxalase-like domain L3i22_002160 PF13538 UvrD-like helicase C-terminal domain L3i22_002200 PF02621 Menaquinone biosynthesis L3i22_002220 PF00248 Aldo/keto reductase family L3i22_002230 PF04434 SWIM zinc finger L3i22_002240 PF12419 SNF2 Helicase protein L3i22_002240 PF00271 Helicase conserved C-terminal domain L3i22_002240 PF00176 SNF2 family N-terminal domain L3i22_002270 PF04055 Radical SAM superfamily L3i22_002280 PF01209 ubiE/COQ5 methyltransferase family L3i22_002300 PF01494 FAD binding domain L3i22_002310 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 L3i22_002320 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit L3i22_002330 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit L3i22_002340 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit L3i22_002360 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit L3i22_002360 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region L3i22_002360 PF10531 SLBB domain L3i22_002370 PF00384 Molybdopterin oxidoreductase L3i22_002370 PF01568 Molydopterin dinucleotide binding domain L3i22_002370 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region L3i22_002380 PF00146 NADH dehydrogenase L3i22_002390 PF12838 4Fe-4S dicluster domain L3i22_002400 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 L3i22_002410 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L L3i22_002420 PF00361 Proton-conducting membrane transporter L3i22_002420 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus L3i22_002430 PF00361 Proton-conducting membrane transporter L3i22_002440 PF00361 Proton-conducting membrane transporter L3i22_002460 PF00348 Polyprenyl synthetase L3i22_002490 PF13490 Putative zinc-finger L3i22_002500 PF00892 EamA-like transporter family L3i22_002510 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV L3i22_002570 PF00561 alpha/beta hydrolase fold L3i22_002600 PF05547 Immune inhibitor A peptidase M6 L3i22_002600 PF00801 PKD domain L3i22_002610 PF16177 Acetyl-coenzyme A synthetase N-terminus L3i22_002610 PF00501 AMP-binding enzyme L3i22_002610 PF13193 AMP-binding enzyme C-terminal domain L3i22_002650 PF01740 STAS domain L3i22_002670 PF00437 Type II/IV secretion system protein L3i22_002730 PF00271 Helicase conserved C-terminal domain L3i22_002730 PF00270 DEAD/DEAH box helicase L3i22_002730 PF09369 Domain of unknown function (DUF1998) L3i22_002740 PF01740 STAS domain L3i22_002760 PF03030 Inorganic H+ pyrophosphatase L3i22_002790 PF01131 DNA topoisomerase L3i22_002790 PF01751 Toprim domain L3i22_002790 PF13368 Topoisomerase C-terminal repeat L3i22_002800 PF04030 D-arabinono-1,4-lactone oxidase L3i22_002800 PF01565 FAD binding domain L3i22_002810 PF00440 Bacterial regulatory proteins, tetR family L3i22_002810 PF17925 Tetracyclin repressor-like, C-terminal domain L3i22_002830 PF02223 Thymidylate kinase L3i22_002850 PF00553 Cellulose binding domain L3i22_002850 PF00331 Glycosyl hydrolase family 10 L3i22_002860 PF12169 DNA polymerase III subunits gamma and tau domain III L3i22_002920 PF04468 PSP1 C-terminal conserved region L3i22_002950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L3i22_002950 PF03466 LysR substrate binding domain L3i22_002980 PF07690 Major Facilitator Superfamily L3i22_002990 PF01494 FAD binding domain L3i22_003070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L3i22_003070 PF03466 LysR substrate binding domain L3i22_003080 PF13460 NAD(P)H-binding L3i22_003110 PF00293 NUDIX domain L3i22_003120 PF02735 Ku70/Ku80 beta-barrel domain L3i22_003130 PF04679 ATP dependent DNA ligase C terminal region L3i22_003130 PF01068 ATP dependent DNA ligase domain L3i22_003130 PF13298 DNA polymerase Ligase (LigD) L3i22_003140 PF01068 ATP dependent DNA ligase domain L3i22_003140 PF04679 ATP dependent DNA ligase C terminal region L3i22_003140 PF13298 DNA polymerase Ligase (LigD) L3i22_003190 PF04851 Type III restriction enzyme, res subunit L3i22_003190 PF00271 Helicase conserved C-terminal domain L3i22_003220 PF13419 Haloacid dehalogenase-like hydrolase L3i22_003230 PF00313 'Cold-shock' DNA-binding domain L3i22_003240 PF02621 Menaquinone biosynthesis L3i22_003270 PF00232 Glycosyl hydrolase family 1 L3i22_003300 PF01048 Phosphorylase superfamily L3i22_003310 PF07690 Major Facilitator Superfamily L3i22_003330 PF11228 Protein of unknown function (DUF3027) L3i22_003350 PF00860 Permease family L3i22_003360 PF01047 MarR family L3i22_003370 PF05977 Transmembrane secretion effector L3i22_003390 PF02834 LigT like Phosphoesterase L3i22_003410 PF00266 Aminotransferase class-V L3i22_003420 PF00285 Citrate synthase, C-terminal domain L3i22_003430 PF01243 Pyridoxamine 5'-phosphate oxidase L3i22_003430 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region L3i22_003440 PF07690 Major Facilitator Superfamily L3i22_003450 PF01263 Aldose 1-epimerase L3i22_003480 PF00441 Acyl-CoA dehydrogenase, C-terminal domain L3i22_003480 PF02770 Acyl-CoA dehydrogenase, middle domain L3i22_003480 PF02771 Acyl-CoA dehydrogenase, N-terminal domain L3i22_003520 PF00005 ABC transporter L3i22_003520 PF17912 MalK OB fold domain L3i22_003540 PF13419 Haloacid dehalogenase-like hydrolase L3i22_003550 PF03633 Glycosyl hydrolase family 65, C-terminal domain L3i22_003550 PF03632 Glycosyl hydrolase family 65 central catalytic domain L3i22_003550 PF03636 Glycosyl hydrolase family 65, N-terminal domain L3i22_003580 PF00005 ABC transporter L3i22_003580 PF01476 LysM domain L3i22_003610 PF16859 Tetracyclin repressor-like, C-terminal domain L3i22_003610 PF00440 Bacterial regulatory proteins, tetR family L3i22_003660 PF07690 Major Facilitator Superfamily L3i22_003670 PF00440 Bacterial regulatory proteins, tetR family L3i22_003670 PF02909 Tetracyclin repressor-like, C-terminal domain L3i22_003710 PF04545 Sigma-70, region 4 L3i22_003710 PF04542 Sigma-70 region 2 L3i22_003740 PF07690 Major Facilitator Superfamily L3i22_003750 PF00486 Transcriptional regulatory protein, C terminal L3i22_003750 PF00072 Response regulator receiver domain L3i22_003760 PF00583 Acetyltransferase (GNAT) family L3i22_003770 PF14765 Polyketide synthase dehydratase L3i22_003770 PF00550 Phosphopantetheine attachment site L3i22_003770 PF08659 KR domain L3i22_003770 PF00107 Zinc-binding dehydrogenase L3i22_003770 PF00109 Beta-ketoacyl synthase, N-terminal domain L3i22_003770 PF16197 Ketoacyl-synthetase C-terminal extension L3i22_003770 PF08240 Alcohol dehydrogenase GroES-like domain L3i22_003770 PF00698 Acyl transferase domain L3i22_003770 PF02801 Beta-ketoacyl synthase, C-terminal domain L3i22_003790 PF00196 Bacterial regulatory proteins, luxR family L3i22_003790 PF00072 Response regulator receiver domain L3i22_003800 PF03176 MMPL family L3i22_003810 PF02537 CrcB-like protein, Camphor Resistance (CrcB) L3i22_003820 PF02537 CrcB-like protein, Camphor Resistance (CrcB) L3i22_003830 PF03707 Bacterial signalling protein N terminal repeat L3i22_003830 PF13188 PAS domain L3i22_003830 PF00563 EAL domain L3i22_003830 PF00990 Diguanylate cyclase, GGDEF domain L3i22_003900 PF01169 Uncharacterized protein family UPF0016 L3i22_003910 PF00561 alpha/beta hydrolase fold L3i22_003940 PF07690 Major Facilitator Superfamily L3i22_003990 PF00704 Glycosyl hydrolases family 18 L3i22_003990 PF00041 Fibronectin type III domain L3i22_003990 PF00553 Cellulose binding domain L3i22_004010 PF00106 short chain dehydrogenase L3i22_004030 PF09335 SNARE associated Golgi protein L3i22_004040 PF04542 Sigma-70 region 2 L3i22_004040 PF04545 Sigma-70, region 4 L3i22_004040 PF04539 Sigma-70 region 3 L3i22_004060 PF00999 Sodium/hydrogen exchanger family L3i22_004070 PF00464 Serine hydroxymethyltransferase L3i22_004110 PF13407 Periplasmic binding protein domain L3i22_004120 PF02653 Branched-chain amino acid transport system / permease component L3i22_004130 PF00005 ABC transporter L3i22_004160 PF03707 Bacterial signalling protein N terminal repeat L3i22_004160 PF00990 Diguanylate cyclase, GGDEF domain L3i22_004160 PF00563 EAL domain L3i22_004180 PF00440 Bacterial regulatory proteins, tetR family L3i22_004180 PF17933 Tetracyclin repressor-like, C-terminal domain L3i22_004190 PF13732 Domain of unknown function (DUF4162) L3i22_004190 PF00005 ABC transporter L3i22_004210 PF00999 Sodium/hydrogen exchanger family L3i22_004230 PF05221 S-adenosyl-L-homocysteine hydrolase L3i22_004230 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain L3i22_004260 PF03795 YCII-related domain L3i22_004270 PF08281 Sigma-70, region 4 L3i22_004270 PF04542 Sigma-70 region 2 L3i22_004280 PF00672 HAMP domain L3i22_004280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L3i22_004300 PF01370 NAD dependent epimerase/dehydratase family L3i22_004310 PF00083 Sugar (and other) transporter L3i22_004360 PF00994 Probable molybdopterin binding domain L3i22_004360 PF03454 MoeA C-terminal region (domain IV) L3i22_004360 PF03453 MoeA N-terminal region (domain I and II) L3i22_004370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L3i22_004370 PF03459 TOBE domain L3i22_004390 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_004400 PF03459 TOBE domain L3i22_004400 PF00005 ABC transporter L3i22_004430 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase L3i22_004440 PF00069 Protein kinase domain L3i22_004440 PF00400 WD domain, G-beta repeat L3i22_004450 PF01126 Heme oxygenase L3i22_004490 PF01497 Periplasmic binding protein L3i22_004500 PF01032 FecCD transport family L3i22_004510 PF00005 ABC transporter L3i22_004520 PF00089 Trypsin L3i22_004530 PF13580 SIS domain L3i22_004600 PF02867 Ribonucleotide reductase, barrel domain L3i22_004600 PF00317 Ribonucleotide reductase, all-alpha domain L3i22_004600 PF03477 ATP cone domain L3i22_004610 PF00268 Ribonucleotide reductase, small chain L3i22_004630 PF13519 von Willebrand factor type A domain L3i22_004640 PF01791 DeoC/LacD family aldolase L3i22_004650 PF07702 UTRA domain L3i22_004650 PF00392 Bacterial regulatory proteins, gntR family L3i22_004670 PF10417 C-terminal domain of 1-Cys peroxiredoxin L3i22_004670 PF00578 AhpC/TSA family L3i22_004680 PF07992 Pyridine nucleotide-disulphide oxidoreductase L3i22_004690 PF00005 ABC transporter L3i22_004710 PF01638 HxlR-like helix-turn-helix L3i22_004720 PF00989 PAS fold L3i22_004720 PF16736 Single Cache-like L3i22_004720 PF00512 His Kinase A (phospho-acceptor) domain L3i22_004720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_004730 PF00486 Transcriptional regulatory protein, C terminal L3i22_004730 PF00072 Response regulator receiver domain L3i22_004760 PF00005 ABC transporter L3i22_004770 PF00005 ABC transporter L3i22_004770 PF12704 MacB-like periplasmic core domain L3i22_004770 PF02687 FtsX-like permease family L3i22_004790 PF04542 Sigma-70 region 2 L3i22_004790 PF08281 Sigma-70, region 4 L3i22_004810 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region L3i22_004810 PF01872 RibD C-terminal domain L3i22_004820 PF00925 GTP cyclohydrolase II L3i22_004940 PF00392 Bacterial regulatory proteins, gntR family L3i22_004970 PF00392 Bacterial regulatory proteins, gntR family L3i22_004970 PF07729 FCD domain L3i22_005000 PF17854 FtsK alpha domain L3i22_005000 PF09397 Ftsk gamma domain L3i22_005000 PF01580 FtsK/SpoIIIE family L3i22_005000 PF13491 4TM region of DNA translocase FtsK/SpoIIIE L3i22_005120 PF04434 SWIM zinc finger L3i22_005120 PF00271 Helicase conserved C-terminal domain L3i22_005120 PF00176 SNF2 family N-terminal domain L3i22_005130 PF07238 PilZ domain L3i22_005130 PF00535 Glycosyl transferase family 2 L3i22_005130 PF03552 Cellulose synthase L3i22_005140 PF02839 Carbohydrate binding domain L3i22_005170 PF03176 MMPL family L3i22_005180 PF02872 5'-nucleotidase, C-terminal domain L3i22_005180 PF00565 Staphylococcal nuclease homologue L3i22_005180 PF00149 Calcineurin-like phosphoesterase L3i22_005180 PF00746 LPXTG cell wall anchor motif L3i22_005190 PF03466 LysR substrate binding domain L3i22_005190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L3i22_005210 PF06737 Transglycosylase-like domain L3i22_005230 PF07228 Stage II sporulation protein E (SpoIIE) L3i22_005230 PF00672 HAMP domain L3i22_005240 PF03435 Saccharopine dehydrogenase NADP binding domain L3i22_005310 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase L3i22_005320 PF00793 DAHP synthetase I family L3i22_005330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_005330 PF00672 HAMP domain L3i22_005330 PF00512 His Kinase A (phospho-acceptor) domain L3i22_005340 PF00486 Transcriptional regulatory protein, C terminal L3i22_005340 PF00072 Response regulator receiver domain L3i22_005390 PF00072 Response regulator receiver domain L3i22_005390 PF00486 Transcriptional regulatory protein, C terminal L3i22_005400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_005400 PF01590 GAF domain L3i22_005400 PF00512 His Kinase A (phospho-acceptor) domain L3i22_005400 PF08446 PAS fold L3i22_005400 PF00360 Phytochrome region L3i22_005410 PF00072 Response regulator receiver domain L3i22_005420 PF00459 Inositol monophosphatase family L3i22_005460 PF03793 PASTA domain L3i22_005460 PF00069 Protein kinase domain L3i22_005490 PF09382 RQC domain L3i22_005490 PF00271 Helicase conserved C-terminal domain L3i22_005490 PF00570 HRDC domain L3i22_005490 PF00270 DEAD/DEAH box helicase L3i22_005490 PF16124 RecQ zinc-binding L3i22_005520 PF02583 Metal-sensitive transcriptional repressor L3i22_005530 PF00403 Heavy-metal-associated domain L3i22_005570 PF00270 DEAD/DEAH box helicase L3i22_005570 PF00271 Helicase conserved C-terminal domain L3i22_005650 PF00581 Rhodanese-like domain L3i22_005650 PF00899 ThiF family L3i22_005690 PF00171 Aldehyde dehydrogenase family L3i22_005700 PF01472 PUA domain L3i22_005700 PF00696 Amino acid kinase family L3i22_005720 PF04072 Leucine carboxyl methyltransferase L3i22_005730 PF00440 Bacterial regulatory proteins, tetR family L3i22_005730 PF13305 Tetracyclin repressor-like, C-terminal domain L3i22_005780 PF00282 Pyridoxal-dependent decarboxylase conserved domain L3i22_005800 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit L3i22_005860 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit L3i22_005870 PF00146 NADH dehydrogenase L3i22_005880 PF00037 4Fe-4S binding domain L3i22_005890 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 L3i22_005900 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L L3i22_005910 PF00361 Proton-conducting membrane transporter L3i22_005910 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus L3i22_005920 PF00361 Proton-conducting membrane transporter L3i22_005930 PF00361 Proton-conducting membrane transporter L3i22_005940 PF04461 Protein of unknown function (DUF520) L3i22_005970 PF01435 Peptidase family M48 L3i22_006040 PF00296 Luciferase-like monooxygenase L3i22_006080 PF00581 Rhodanese-like domain L3i22_006110 PF13188 PAS domain L3i22_006110 PF03707 Bacterial signalling protein N terminal repeat L3i22_006110 PF00990 Diguanylate cyclase, GGDEF domain L3i22_006110 PF00563 EAL domain L3i22_006120 PF00471 Ribosomal protein L33 L3i22_006130 PF13452 N-terminal half of MaoC dehydratase L3i22_006150 PF00584 SecE/Sec61-gamma subunits of protein translocation complex L3i22_006160 PF02357 Transcription termination factor nusG L3i22_006170 PF00687 Ribosomal protein L1p/L10e family L3i22_006180 PF00005 ABC transporter L3i22_006200 PF00466 Ribosomal protein L10 L3i22_006210 PF00542 Ribosomal protein L7/L12 C-terminal domain L3i22_006210 PF16320 Ribosomal protein L7/L12 dimerisation domain L3i22_006220 PF04565 RNA polymerase Rpb2, domain 3 L3i22_006220 PF04563 RNA polymerase beta subunit L3i22_006220 PF04560 RNA polymerase Rpb2, domain 7 L3i22_006220 PF00562 RNA polymerase Rpb2, domain 6 L3i22_006220 PF04561 RNA polymerase Rpb2, domain 2 L3i22_006220 PF10385 RNA polymerase beta subunit external 1 domain L3i22_006230 PF04997 RNA polymerase Rpb1, domain 1 L3i22_006230 PF04983 RNA polymerase Rpb1, domain 3 L3i22_006230 PF00623 RNA polymerase Rpb1, domain 2 L3i22_006230 PF04998 RNA polymerase Rpb1, domain 5 L3i22_006230 PF05000 RNA polymerase Rpb1, domain 4 L3i22_006260 PF00164 Ribosomal protein S12/S23 L3i22_006270 PF00177 Ribosomal protein S7p/S5e L3i22_006280 PF00679 Elongation factor G C-terminus L3i22_006280 PF03764 Elongation factor G, domain IV L3i22_006280 PF03144 Elongation factor Tu domain 2 L3i22_006280 PF00009 Elongation factor Tu GTP binding domain L3i22_006280 PF14492 Elongation Factor G, domain II L3i22_006290 PF03143 Elongation factor Tu C-terminal domain L3i22_006290 PF03144 Elongation factor Tu domain 2 L3i22_006290 PF00009 Elongation factor Tu GTP binding domain L3i22_006300 PF00338 Ribosomal protein S10p/S20e L3i22_006310 PF00297 Ribosomal protein L3 L3i22_006320 PF00573 Ribosomal protein L4/L1 family L3i22_006330 PF00276 Ribosomal protein L23 L3i22_006340 PF03947 Ribosomal Proteins L2, C-terminal domain L3i22_006340 PF00181 Ribosomal Proteins L2, RNA binding domain L3i22_006350 PF00203 Ribosomal protein S19 L3i22_006360 PF00237 Ribosomal protein L22p/L17e L3i22_006370 PF07650 KH domain L3i22_006370 PF00189 Ribosomal protein S3, C-terminal domain L3i22_006380 PF00252 Ribosomal protein L16p/L10e L3i22_006390 PF00831 Ribosomal L29 protein L3i22_006400 PF00366 Ribosomal protein S17 L3i22_006410 PF00238 Ribosomal protein L14p/L23e L3i22_006420 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 L3i22_006420 PF00467 KOW motif L3i22_006430 PF00673 ribosomal L5P family C-terminus L3i22_006430 PF00281 Ribosomal protein L5 L3i22_006440 PF00253 Ribosomal protein S14p/S29e L3i22_006450 PF00410 Ribosomal protein S8 L3i22_006460 PF00347 Ribosomal protein L6 L3i22_006470 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast L3i22_006480 PF00333 Ribosomal protein S5, N-terminal domain L3i22_006480 PF03719 Ribosomal protein S5, C-terminal domain L3i22_006490 PF00327 Ribosomal protein L30p/L7e L3i22_006500 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A L3i22_006510 PF00344 SecY translocase L3i22_006520 PF05191 Adenylate kinase, active site lid L3i22_006530 PF00557 Metallopeptidase family M24 L3i22_006550 PF01176 Translation initiation factor 1A / IF-1 L3i22_006560 PF00416 Ribosomal protein S13/S18 L3i22_006570 PF00411 Ribosomal protein S11 L3i22_006580 PF00163 Ribosomal protein S4/S9 N-terminal domain L3i22_006580 PF01479 S4 domain L3i22_006590 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain L3i22_006590 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain L3i22_006590 PF01000 RNA polymerase Rpb3/RpoA insert domain L3i22_006600 PF01196 Ribosomal protein L17 L3i22_006610 PF01416 tRNA pseudouridine synthase L3i22_006630 PF08468 Methyltransferase small domain N-terminal L3i22_006630 PF05175 Methyltransferase small domain L3i22_006640 PF00005 ABC transporter L3i22_006640 PF12848 ABC transporter L3i22_006650 PF02581 Thiamine monophosphate synthase L3i22_006660 PF05690 Thiazole biosynthesis protein ThiG L3i22_006660 PF01266 FAD dependent oxidoreductase L3i22_006670 PF02597 ThiS family L3i22_006670 PF05690 Thiazole biosynthesis protein ThiG L3i22_006680 PF05690 Thiazole biosynthesis protein ThiG L3i22_006690 PF02581 Thiamine monophosphate synthase L3i22_006700 PF08543 Phosphomethylpyrimidine kinase L3i22_006710 PF01964 Radical SAM ThiC family L3i22_006710 PF13667 ThiC-associated domain L3i22_006770 PF03259 Roadblock/LC7 domain L3i22_006820 PF00572 Ribosomal protein L13 L3i22_006830 PF00380 Ribosomal protein S9/S16 L3i22_006840 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I L3i22_006840 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II L3i22_006840 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III L3i22_006840 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain L3i22_006850 PF00155 Aminotransferase class I and II L3i22_006870 PF01380 SIS domain L3i22_006900 PF01648 4'-phosphopantetheinyl transferase superfamily L3i22_006910 PF03853 YjeF-related protein N-terminus L3i22_006910 PF01256 Carbohydrate kinase L3i22_006920 PF01168 Alanine racemase, N-terminal domain L3i22_006920 PF00842 Alanine racemase, C-terminal domain L3i22_006930 PF00561 alpha/beta hydrolase fold L3i22_006940 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE L3i22_006950 PF03167 Uracil DNA glycosylase superfamily L3i22_006960 PF00814 Glycoprotease family L3i22_006960 PF00583 Acetyltransferase (GNAT) family L3i22_006980 PF00814 Glycoprotease family L3i22_007000 PF00664 ABC transporter transmembrane region L3i22_007000 PF00005 ABC transporter L3i22_007010 PF00005 ABC transporter L3i22_007010 PF00664 ABC transporter transmembrane region L3i22_007020 PF00118 TCP-1/cpn60 chaperonin family L3i22_007030 PF00166 Chaperonin 10 Kd subunit L3i22_007050 PF04073 Aminoacyl-tRNA editing domain L3i22_007060 PF13407 Periplasmic binding protein domain L3i22_007070 PF00005 ABC transporter L3i22_007080 PF02653 Branched-chain amino acid transport system / permease component L3i22_007090 PF00480 ROK family L3i22_007140 PF02467 Transcription factor WhiB L3i22_007150 PF00072 Response regulator receiver domain L3i22_007150 PF00196 Bacterial regulatory proteins, luxR family L3i22_007160 PF17252 Family of unknown function (DUF5319) L3i22_007170 PF00478 IMP dehydrogenase / GMP reductase domain L3i22_007170 PF00571 CBS domain L3i22_007180 PF00478 IMP dehydrogenase / GMP reductase domain L3i22_007190 PF11838 ERAP1-like C-terminal domain L3i22_007190 PF01433 Peptidase family M1 domain L3i22_007200 PF03816 Cell envelope-related transcriptional attenuator domain L3i22_007210 PF00082 Subtilase family L3i22_007220 PF02540 NAD synthase L3i22_007220 PF00117 Glutamine amidotransferase class-I L3i22_007220 PF00958 GMP synthase C terminal domain L3i22_007230 PF00293 NUDIX domain L3i22_007240 PF00293 NUDIX domain L3i22_007250 PF01066 CDP-alcohol phosphatidyltransferase L3i22_007270 PF04542 Sigma-70 region 2 L3i22_007270 PF08281 Sigma-70, region 4 L3i22_007280 PF02666 Phosphatidylserine decarboxylase L3i22_007320 PF00196 Bacterial regulatory proteins, luxR family L3i22_007320 PF00072 Response regulator receiver domain L3i22_007330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle L3i22_007340 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_007350 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_007350 PF12911 N-terminal TM domain of oligopeptide transport permease C L3i22_007360 PF00005 ABC transporter L3i22_007360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L3i22_007370 PF00005 ABC transporter L3i22_007370 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L3i22_007380 PF01817 Chorismate mutase type II L3i22_007400 PF00746 LPXTG cell wall anchor motif L3i22_007400 PF00565 Staphylococcal nuclease homologue L3i22_007400 PF00149 Calcineurin-like phosphoesterase L3i22_007400 PF02872 5'-nucleotidase, C-terminal domain L3i22_007410 PF13361 UvrD-like helicase C-terminal domain L3i22_007410 PF00580 UvrD/REP helicase N-terminal domain L3i22_007420 PF01551 Peptidase family M23 L3i22_007430 PF01551 Peptidase family M23 L3i22_007450 PF08442 ATP-grasp domain L3i22_007450 PF00549 CoA-ligase L3i22_007460 PF02629 CoA binding domain L3i22_007460 PF00549 CoA-ligase L3i22_007480 PF00551 Formyl transferase L3i22_007490 PF01808 AICARFT/IMPCHase bienzyme L3i22_007490 PF02142 MGS-like domain L3i22_007540 PF00180 Isocitrate/isopropylmalate dehydrogenase L3i22_007550 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain L3i22_007550 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain L3i22_007560 PF08220 DeoR-like helix-turn-helix domain L3i22_007560 PF00455 DeoR C terminal sensor domain L3i22_007590 PF03808 Glycosyl transferase WecB/TagA/CpsF family L3i22_007720 PF13614 AAA domain L3i22_007720 PF13807 G-rich domain on putative tyrosine kinase L3i22_007720 PF02706 Chain length determinant protein L3i22_007750 PF00005 ABC transporter L3i22_007750 PF13732 Domain of unknown function (DUF4162) L3i22_007770 PF00005 ABC transporter L3i22_007820 PF00311 Phosphoenolpyruvate carboxylase L3i22_007830 PF01341 Glycosyl hydrolases family 6 L3i22_007830 PF00553 Cellulose binding domain L3i22_007840 PF00551 Formyl transferase L3i22_007840 PF02911 Formyl transferase, C-terminal domain L3i22_007840 PF00378 Enoyl-CoA hydratase/isomerase L3i22_007850 PF03461 TRCF domain L3i22_007850 PF17757 UvrB interaction domain L3i22_007850 PF00270 DEAD/DEAH box helicase L3i22_007850 PF00271 Helicase conserved C-terminal domain L3i22_007850 PF02559 CarD-like/TRCF domain L3i22_007870 PF03819 MazG nucleotide pyrophosphohydrolase domain L3i22_007900 PF00113 Enolase, C-terminal TIM barrel domain L3i22_007900 PF03952 Enolase, N-terminal domain L3i22_007930 PF00583 Acetyltransferase (GNAT) family L3i22_007940 PF02541 Ppx/GppA phosphatase family L3i22_007960 PF03167 Uracil DNA glycosylase superfamily L3i22_007990 PF07726 ATPase family associated with various cellular activities (AAA) L3i22_007990 PF17863 AAA lid domain L3i22_008060 PF00108 Thiolase, N-terminal domain L3i22_008060 PF02803 Thiolase, C-terminal domain L3i22_008070 PF13472 GDSL-like Lipase/Acylhydrolase family L3i22_008100 PF00291 Pyridoxal-phosphate dependent enzyme L3i22_008100 PF00571 CBS domain L3i22_008110 PF13180 PDZ domain L3i22_008150 PF00753 Metallo-beta-lactamase superfamily L3i22_008150 PF12706 Beta-lactamase superfamily domain L3i22_008160 PF03976 Polyphosphate kinase 2 (PPK2) L3i22_008170 PF05235 CHAD domain L3i22_008170 PF01928 CYTH domain L3i22_008200 PF01625 Peptide methionine sulfoxide reductase L3i22_008210 PF01230 HIT domain L3i22_008220 PF01053 Cys/Met metabolism PLP-dependent enzyme L3i22_008230 PF01425 Amidase L3i22_008240 PF13291 ACT domain L3i22_008240 PF00291 Pyridoxal-phosphate dependent enzyme L3i22_008250 PF01435 Peptidase family M48 L3i22_008260 PF03449 Transcription elongation factor, N-terminal L3i22_008260 PF01272 Transcription elongation factor, GreA/GreB, C-term L3i22_008280 PF02585 GlcNAc-PI de-N-acetylase L3i22_008300 PF00990 Diguanylate cyclase, GGDEF domain L3i22_008300 PF00563 EAL domain L3i22_008300 PF03707 Bacterial signalling protein N terminal repeat L3i22_008310 PF03190 Protein of unknown function, DUF255 L3i22_008330 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain L3i22_008330 PF02222 ATP-grasp domain L3i22_008340 PF00731 AIR carboxylase L3i22_008360 PF00441 Acyl-CoA dehydrogenase, C-terminal domain L3i22_008360 PF02770 Acyl-CoA dehydrogenase, middle domain L3i22_008360 PF02771 Acyl-CoA dehydrogenase, N-terminal domain L3i22_008390 PF01965 DJ-1/PfpI family L3i22_008400 PF08240 Alcohol dehydrogenase GroES-like domain L3i22_008400 PF00107 Zinc-binding dehydrogenase L3i22_008420 PF00486 Transcriptional regulatory protein, C terminal L3i22_008420 PF03704 Bacterial transcriptional activator domain L3i22_008420 PF00931 NB-ARC domain L3i22_008430 PF04545 Sigma-70, region 4 L3i22_008430 PF04542 Sigma-70 region 2 L3i22_008470 PF12538 DNA transporter L3i22_008470 PF01580 FtsK/SpoIIIE family L3i22_008520 PF04545 Sigma-70, region 4 L3i22_008520 PF04542 Sigma-70 region 2 L3i22_008560 PF00196 Bacterial regulatory proteins, luxR family L3i22_008560 PF00072 Response regulator receiver domain L3i22_008570 PF07676 WD40-like Beta Propeller Repeat L3i22_008590 PF00004 ATPase family associated with various cellular activities (AAA) L3i22_008800 PF03704 Bacterial transcriptional activator domain L3i22_008800 PF00931 NB-ARC domain L3i22_008800 PF00486 Transcriptional regulatory protein, C terminal L3i22_008830 PF00682 HMGL-like L3i22_008830 PF08502 LeuA allosteric (dimerisation) domain L3i22_008840 PF00588 SpoU rRNA Methylase family L3i22_008850 PF14759 Reductase C-terminal L3i22_008850 PF07992 Pyridine nucleotide-disulphide oxidoreductase L3i22_008880 PF00356 Bacterial regulatory proteins, lacI family L3i22_008900 PF00457 Glycosyl hydrolases family 11 L3i22_008900 PF03422 Carbohydrate binding module (family 6) L3i22_008920 PF07687 Peptidase dimerisation domain L3i22_008920 PF01546 Peptidase family M20/M25/M40 L3i22_008930 PF00083 Sugar (and other) transporter L3i22_008960 PF01053 Cys/Met metabolism PLP-dependent enzyme L3i22_008970 PF00155 Aminotransferase class I and II L3i22_009000 PF00501 AMP-binding enzyme L3i22_009000 PF13193 AMP-binding enzyme C-terminal domain L3i22_009020 PF00534 Glycosyl transferases group 1 L3i22_009020 PF13439 Glycosyltransferase Family 4 L3i22_009030 PF01050 Mannose-6-phosphate isomerase L3i22_009030 PF00483 Nucleotidyl transferase L3i22_009060 PF01996 F420-0:Gamma-glutamyl ligase L3i22_009060 PF00881 Nitroreductase family L3i22_009070 PF01933 Uncharacterised protein family UPF0052 L3i22_009090 PF04055 Radical SAM superfamily L3i22_009100 PF02467 Transcription factor WhiB L3i22_009130 PF01522 Polysaccharide deacetylase L3i22_009160 PF00171 Aldehyde dehydrogenase family L3i22_009180 PF04493 Endonuclease V L3i22_009190 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I L3i22_009190 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II L3i22_009190 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III L3i22_009190 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain L3i22_009200 PF03966 Trm112p-like protein L3i22_009220 PF01545 Cation efflux family L3i22_009220 PF16916 Dimerisation domain of Zinc Transporter L3i22_009230 PF01238 Phosphomannose isomerase type I L3i22_009260 PF00072 Response regulator receiver domain L3i22_009260 PF00486 Transcriptional regulatory protein, C terminal L3i22_009270 PF00672 HAMP domain L3i22_009270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_009270 PF00512 His Kinase A (phospho-acceptor) domain L3i22_009290 PF00156 Phosphoribosyl transferase domain L3i22_009300 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein L3i22_009300 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus L3i22_009320 PF01043 SecA preprotein cross-linking domain L3i22_009320 PF02810 SEC-C motif L3i22_009320 PF07516 SecA Wing and Scaffold domain L3i22_009320 PF07517 SecA DEAD-like domain L3i22_009390 PF00472 RF-1 domain L3i22_009390 PF03462 PCRF domain L3i22_009400 PF00005 ABC transporter L3i22_009410 PF02687 FtsX-like permease family L3i22_009410 PF18075 FtsX extracellular domain L3i22_009420 PF10145 Phage-related minor tail protein L3i22_009420 PF01551 Peptidase family M23 L3i22_009420 PF01464 Transglycosylase SLT domain L3i22_009430 PF01668 SmpB protein L3i22_009450 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system L3i22_009460 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system L3i22_009470 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch L3i22_009470 PF05222 Alanine dehydrogenase/PNT, N-terminal domain L3i22_009470 PF01262 Alanine dehydrogenase/PNT, C-terminal domain L3i22_009480 PF02233 NAD(P) transhydrogenase beta subunit L3i22_009510 PF02622 Uncharacterized ACR, COG1678 L3i22_009520 PF01048 Phosphorylase superfamily L3i22_009600 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_009610 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_009620 PF12849 PBP superfamily domain L3i22_009690 PF00005 ABC transporter L3i22_009710 PF00486 Transcriptional regulatory protein, C terminal L3i22_009710 PF00072 Response regulator receiver domain L3i22_009720 PF00296 Luciferase-like monooxygenase L3i22_009760 PF06750 Bacterial Peptidase A24 N-terminal domain L3i22_009760 PF01478 Type IV leader peptidase family L3i22_009770 PF00114 Pilin (bacterial filament) L3i22_009770 PF07963 Prokaryotic N-terminal methylation motif L3i22_009780 PF00482 Type II secretion system (T2SS), protein F L3i22_009790 PF00437 Type II/IV secretion system protein L3i22_009800 PF00437 Type II/IV secretion system protein L3i22_009800 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain L3i22_009810 PF01965 DJ-1/PfpI family L3i22_009830 PF01740 STAS domain L3i22_009850 PF03707 Bacterial signalling protein N terminal repeat L3i22_009850 PF00990 Diguanylate cyclase, GGDEF domain L3i22_009850 PF00563 EAL domain L3i22_009930 PF13466 STAS domain L3i22_009930 PF07228 Stage II sporulation protein E (SpoIIE) L3i22_009930 PF08448 PAS fold L3i22_009930 PF13581 Histidine kinase-like ATPase domain L3i22_010010 PF13086 AAA domain L3i22_010010 PF13087 AAA domain L3i22_010010 PF13195 Protein of unknown function (DUF4011) L3i22_010020 PF00563 EAL domain L3i22_010020 PF00989 PAS fold L3i22_010020 PF00990 Diguanylate cyclase, GGDEF domain L3i22_010020 PF01590 GAF domain L3i22_010040 PF01047 MarR family L3i22_010050 PF00107 Zinc-binding dehydrogenase L3i22_010050 PF08240 Alcohol dehydrogenase GroES-like domain L3i22_010070 PF01068 ATP dependent DNA ligase domain L3i22_010070 PF13298 DNA polymerase Ligase (LigD) L3i22_010070 PF04679 ATP dependent DNA ligase C terminal region L3i22_010080 PF01494 FAD binding domain L3i22_010090 PF00115 Cytochrome C and Quinol oxidase polypeptide I L3i22_010110 PF00296 Luciferase-like monooxygenase L3i22_010140 PF00857 Isochorismatase family L3i22_010150 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain L3i22_010150 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain L3i22_010160 PF02617 ATP-dependent Clp protease adaptor protein ClpS L3i22_010180 PF14464 Prokaryotic homologs of the JAB domain L3i22_010190 PF02597 ThiS family L3i22_010200 PF00291 Pyridoxal-phosphate dependent enzyme L3i22_010220 PF12706 Beta-lactamase superfamily domain L3i22_010230 PF00534 Glycosyl transferases group 1 L3i22_010230 PF13579 Glycosyl transferase 4-like domain L3i22_010240 PF01138 3' exoribonuclease family, domain 1 L3i22_010240 PF03725 3' exoribonuclease family, domain 2 L3i22_010250 PF01725 Ham1 family L3i22_010270 PF00221 Aromatic amino acid lyase L3i22_010280 PF01979 Amidohydrolase family L3i22_010300 PF01546 Peptidase family M20/M25/M40 L3i22_010310 PF17391 Urocanase N-terminal domain L3i22_010310 PF17392 Urocanase C-terminal domain L3i22_010310 PF01175 Urocanase Rossmann-like domain L3i22_010340 PF00376 MerR family regulatory protein L3i22_010340 PF09278 MerR, DNA binding L3i22_010360 PF00005 ABC transporter L3i22_010380 PF07730 Histidine kinase L3i22_010390 PF00196 Bacterial regulatory proteins, luxR family L3i22_010390 PF00072 Response regulator receiver domain L3i22_010410 PF02675 S-adenosylmethionine decarboxylase L3i22_010420 PF00578 AhpC/TSA family L3i22_010440 PF03476 MOSC N-terminal beta barrel domain L3i22_010440 PF00111 2Fe-2S iron-sulfur cluster binding domain L3i22_010440 PF03473 MOSC domain L3i22_010480 PF06965 Na+/H+ antiporter 1 L3i22_010480 PF13462 Thioredoxin L3i22_010500 PF04542 Sigma-70 region 2 L3i22_010500 PF08281 Sigma-70, region 4 L3i22_010510 PF05425 Copper resistance protein D L3i22_010540 PF00929 Exonuclease L3i22_010550 PF01341 Glycosyl hydrolases family 6 L3i22_010550 PF00041 Fibronectin type III domain L3i22_010550 PF00553 Cellulose binding domain L3i22_010600 PF17964 Bacterial Ig domain L3i22_010600 PF03734 L,D-transpeptidase catalytic domain L3i22_010610 PF17964 Bacterial Ig domain L3i22_010610 PF03734 L,D-transpeptidase catalytic domain L3i22_010630 PF00356 Bacterial regulatory proteins, lacI family L3i22_010640 PF00890 FAD binding domain L3i22_010640 PF02910 Fumarate reductase flavoprotein C-term L3i22_010660 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_010670 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_010680 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain L3i22_010680 PF02278 Polysaccharide lyase family 8, super-sandwich domain L3i22_010680 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain L3i22_010700 PF00759 Glycosyl hydrolase family 9 L3i22_010700 PF00942 Cellulose binding domain L3i22_010710 PF03358 NADPH-dependent FMN reductase L3i22_010740 PF00005 ABC transporter L3i22_010750 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_010760 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_010770 PF00196 Bacterial regulatory proteins, luxR family L3i22_010770 PF00072 Response regulator receiver domain L3i22_010780 PF07730 Histidine kinase L3i22_010800 PF00067 Cytochrome P450 L3i22_010820 PF05491 RuvB C-terminal winged helix domain L3i22_010820 PF05496 Holliday junction DNA helicase RuvB P-loop domain L3i22_010820 PF17864 RuvB AAA lid domain L3i22_010880 PF17853 GGDEF-like domain L3i22_010880 PF13556 PucR C-terminal helix-turn-helix domain L3i22_010890 PF00990 Diguanylate cyclase, GGDEF domain L3i22_010890 PF17151 Periplasmic sensor domain L3i22_010990 PF00150 Cellulase (glycosyl hydrolase family 5) L3i22_010990 PF03442 Carbohydrate binding domain X2 L3i22_010990 PF18448 Carbohydrate binding domain L3i22_011010 PF00933 Glycosyl hydrolase family 3 N terminal domain L3i22_011010 PF14310 Fibronectin type III-like domain L3i22_011010 PF01915 Glycosyl hydrolase family 3 C-terminal domain L3i22_011010 PF07691 PA14 domain L3i22_011020 PF00480 ROK family L3i22_011040 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_011050 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_011080 PF02449 Beta-galactosidase L3i22_011080 PF08533 Beta-galactosidase C-terminal domain L3i22_011080 PF08532 Beta-galactosidase trimerisation domain L3i22_011100 PF01965 DJ-1/PfpI family L3i22_011130 PF01565 FAD binding domain L3i22_011130 PF04030 D-arabinono-1,4-lactone oxidase L3i22_011150 PF00072 Response regulator receiver domain L3i22_011150 PF00486 Transcriptional regulatory protein, C terminal L3i22_011160 PF00990 Diguanylate cyclase, GGDEF domain L3i22_011160 PF03707 Bacterial signalling protein N terminal repeat L3i22_011160 PF00563 EAL domain L3i22_011220 PF13732 Domain of unknown function (DUF4162) L3i22_011220 PF00005 ABC transporter L3i22_011250 PF04542 Sigma-70 region 2 L3i22_011250 PF08281 Sigma-70, region 4 L3i22_011260 PF00296 Luciferase-like monooxygenase L3i22_011270 PF00583 Acetyltransferase (GNAT) family L3i22_011280 PF00728 Glycosyl hydrolase family 20, catalytic domain L3i22_011280 PF02838 Glycosyl hydrolase family 20, domain 2 L3i22_011340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_011340 PF00512 His Kinase A (phospho-acceptor) domain L3i22_011340 PF00672 HAMP domain L3i22_011380 PF00486 Transcriptional regulatory protein, C terminal L3i22_011380 PF03704 Bacterial transcriptional activator domain L3i22_011380 PF00931 NB-ARC domain L3i22_011410 PF00356 Bacterial regulatory proteins, lacI family L3i22_011440 PF10282 Lactonase, 7-bladed beta-propeller L3i22_011460 PF00480 ROK family L3i22_011470 PF01261 Xylose isomerase-like TIM barrel L3i22_011480 PF02782 FGGY family of carbohydrate kinases, C-terminal domain L3i22_011480 PF00370 FGGY family of carbohydrate kinases, N-terminal domain L3i22_011490 PF00534 Glycosyl transferases group 1 L3i22_011490 PF13579 Glycosyl transferase 4-like domain L3i22_011500 PF07690 Major Facilitator Superfamily L3i22_011510 PF00128 Alpha amylase, catalytic domain L3i22_011520 PF13291 ACT domain L3i22_011520 PF04607 Region found in RelA / SpoT proteins L3i22_011520 PF02824 TGS domain L3i22_011530 PF03707 Bacterial signalling protein N terminal repeat L3i22_011530 PF00990 Diguanylate cyclase, GGDEF domain L3i22_011530 PF00563 EAL domain L3i22_011580 PF02223 Thymidylate kinase L3i22_011600 PF04545 Sigma-70, region 4 L3i22_011600 PF04539 Sigma-70 region 3 L3i22_011600 PF04542 Sigma-70 region 2 L3i22_011600 PF00140 Sigma-70 factor, region 1.2 L3i22_011610 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain L3i22_011610 PF00877 NlpC/P60 family L3i22_011620 PF12823 Domain of unknown function (DUF3817) L3i22_011670 PF03992 Antibiotic biosynthesis monooxygenase L3i22_011690 PF03992 Antibiotic biosynthesis monooxygenase L3i22_011700 PF07690 Major Facilitator Superfamily L3i22_011740 PF00072 Response regulator receiver domain L3i22_011740 PF00196 Bacterial regulatory proteins, luxR family L3i22_011760 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain L3i22_011760 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain L3i22_011770 PF00672 HAMP domain L3i22_011770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_011770 PF00512 His Kinase A (phospho-acceptor) domain L3i22_011780 PF00072 Response regulator receiver domain L3i22_011780 PF00486 Transcriptional regulatory protein, C terminal L3i22_011810 PF00005 ABC transporter L3i22_011820 PF02687 FtsX-like permease family L3i22_011820 PF12704 MacB-like periplasmic core domain L3i22_011850 PF00436 Single-strand binding protein family L3i22_011870 PF03186 CobD/Cbib protein L3i22_011880 PF07685 CobB/CobQ-like glutamine amidotransferase domain L3i22_011880 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain L3i22_011890 PF01435 Peptidase family M48 L3i22_011900 PF07687 Peptidase dimerisation domain L3i22_011900 PF01546 Peptidase family M20/M25/M40 L3i22_011910 PF01494 FAD binding domain L3i22_011930 PF04679 ATP dependent DNA ligase C terminal region L3i22_011930 PF01068 ATP dependent DNA ligase domain L3i22_011960 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain L3i22_011960 PF07685 CobB/CobQ-like glutamine amidotransferase domain L3i22_011980 PF00905 Penicillin binding protein transpeptidase domain L3i22_011980 PF00912 Transglycosylase L3i22_011980 PF17092 Penicillin-binding protein OB-like domain L3i22_011990 PF00155 Aminotransferase class I and II L3i22_012000 PF02277 Phosphoribosyltransferase L3i22_012010 PF10414 Sirohaem synthase dimerisation region L3i22_012010 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases L3i22_012010 PF14824 Sirohaem biosynthesis protein central L3i22_012020 PF00982 Glycosyltransferase family 20 L3i22_012040 PF12848 ABC transporter L3i22_012040 PF00005 ABC transporter L3i22_012090 PF01152 Bacterial-like globin L3i22_012110 PF00924 Mechanosensitive ion channel L3i22_012160 PF17174 Domain of unknown function (DUF5130) L3i22_012180 PF11838 ERAP1-like C-terminal domain L3i22_012180 PF01433 Peptidase family M1 domain L3i22_012190 PF01323 DSBA-like thioredoxin domain L3i22_012210 PF07859 alpha/beta hydrolase fold L3i22_012220 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) L3i22_012240 PF17668 Acetyltransferase (GNAT) domain L3i22_012240 PF13530 Sterol carrier protein domain L3i22_012280 PF00857 Isochorismatase family L3i22_012290 PF00857 Isochorismatase family L3i22_012300 PF07729 FCD domain L3i22_012300 PF00392 Bacterial regulatory proteins, gntR family L3i22_012360 PF07728 AAA domain (dynein-related subfamily) L3i22_012360 PF08406 CbbQ/NirQ/NorQ C-terminal L3i22_012370 PF09967 VWA-like domain (DUF2201) L3i22_012370 PF13203 Putative metallopeptidase domain L3i22_012460 PF07702 UTRA domain L3i22_012460 PF00392 Bacterial regulatory proteins, gntR family L3i22_012520 PF09397 Ftsk gamma domain L3i22_012520 PF17854 FtsK alpha domain L3i22_012520 PF01580 FtsK/SpoIIIE family L3i22_012560 PF00589 Phage integrase family L3i22_012560 PF14659 Phage integrase, N-terminal SAM-like domain L3i22_012570 PF05697 Bacterial trigger factor protein (TF) L3i22_012570 PF05698 Bacterial trigger factor protein (TF) C-terminus L3i22_012570 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase L3i22_012580 PF00574 Clp protease L3i22_012590 PF00574 Clp protease L3i22_012600 PF10431 C-terminal, D2-small domain, of ClpB protein L3i22_012600 PF06689 ClpX C4-type zinc finger L3i22_012600 PF07724 AAA domain (Cdc48 subfamily) L3i22_012620 PF00795 Carbon-nitrogen hydrolase L3i22_012650 PF08264 Anticodon-binding domain of tRNA L3i22_012650 PF10458 Valyl tRNA synthetase tRNA binding arm L3i22_012650 PF00133 tRNA synthetases class I (I, L, M and V) L3i22_012660 PF02875 Mur ligase family, glutamate ligase domain L3i22_012660 PF08245 Mur ligase middle domain L3i22_012690 PF00334 Nucleoside diphosphate kinase L3i22_012720 PF00005 ABC transporter L3i22_012740 PF16655 PhoD-like phosphatase, N-terminal domain L3i22_012740 PF09423 PhoD-like phosphatase L3i22_012750 PF00133 tRNA synthetases class I (I, L, M and V) L3i22_012750 PF08264 Anticodon-binding domain of tRNA L3i22_012780 PF12697 Alpha/beta hydrolase family L3i22_012790 PF13581 Histidine kinase-like ATPase domain L3i22_012790 PF13466 STAS domain L3i22_012790 PF07228 Stage II sporulation protein E (SpoIIE) L3i22_012790 PF08448 PAS fold L3i22_012830 PF10150 Ribonuclease E/G family L3i22_012850 PF00829 Ribosomal prokaryotic L21 protein L3i22_012860 PF01016 Ribosomal L27 protein L3i22_012870 PF09269 Domain of unknown function (DUF1967) L3i22_012870 PF01926 50S ribosome-binding GTPase L3i22_012870 PF01018 GTP1/OBG L3i22_012880 PF00583 Acetyltransferase (GNAT) family L3i22_012890 PF00579 tRNA synthetases class I (W and Y) L3i22_012900 PF11838 ERAP1-like C-terminal domain L3i22_012900 PF01433 Peptidase family M1 domain L3i22_012910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_012910 PF13188 PAS domain L3i22_012910 PF00072 Response regulator receiver domain L3i22_012910 PF00512 His Kinase A (phospho-acceptor) domain L3i22_012910 PF08448 PAS fold L3i22_012920 PF01467 Cytidylyltransferase-like L3i22_012940 PF00300 Histidine phosphatase superfamily (branch 1) L3i22_012960 PF02645 Uncharacterised protein, DegV family COG1307 L3i22_012980 PF05175 Methyltransferase small domain L3i22_012980 PF17827 PrmC N-terminal domain L3i22_013010 PF03772 Competence protein L3i22_013010 PF00753 Metallo-beta-lactamase superfamily L3i22_013010 PF13567 Domain of unknown function (DUF4131) L3i22_013020 PF01757 Acyltransferase family L3i22_013050 PF01649 Ribosomal protein S20 L3i22_013090 PF00009 Elongation factor Tu GTP binding domain L3i22_013090 PF06421 GTP-binding protein LepA C-terminus L3i22_013090 PF00679 Elongation factor G C-terminus L3i22_013090 PF03144 Elongation factor Tu domain 2 L3i22_013100 PF04226 Transglycosylase associated protein L3i22_013140 PF04055 Radical SAM superfamily L3i22_013150 PF01628 HrcA protein C terminal domain L3i22_013160 PF00226 DnaJ domain L3i22_013160 PF01556 DnaJ C terminal domain L3i22_013160 PF00684 DnaJ central domain L3i22_013170 PF17925 Tetracyclin repressor-like, C-terminal domain L3i22_013170 PF00440 Bacterial regulatory proteins, tetR family L3i22_013180 PF06441 Epoxide hydrolase N terminus L3i22_013190 PF04452 RNA methyltransferase L3i22_013200 PF07691 PA14 domain L3i22_013200 PF14310 Fibronectin type III-like domain L3i22_013200 PF01915 Glycosyl hydrolase family 3 C-terminal domain L3i22_013200 PF00933 Glycosyl hydrolase family 3 N terminal domain L3i22_013210 PF01230 HIT domain L3i22_013220 PF00144 Beta-lactamase L3i22_013240 PF02562 PhoH-like protein L3i22_013250 PF02130 Uncharacterized protein family UPF0054 L3i22_013260 PF00571 CBS domain L3i22_013260 PF01595 Cyclin M transmembrane N-terminal domain L3i22_013260 PF03471 Transporter associated domain L3i22_013280 PF01926 50S ribosome-binding GTPase L3i22_013280 PF07650 KH domain L3i22_013310 PF02565 Recombination protein O C terminal L3i22_013310 PF11967 Recombination protein O N terminal L3i22_013320 PF01255 Putative undecaprenyl diphosphate synthase L3i22_013350 PF01910 Thiamine-binding protein L3i22_013360 PF00248 Aldo/keto reductase family L3i22_013400 PF08000 Bacterial PH domain L3i22_013440 PF00005 ABC transporter L3i22_013460 PF00561 alpha/beta hydrolase fold L3i22_013490 PF01475 Ferric uptake regulator family L3i22_013500 PF01022 Bacterial regulatory protein, arsR family L3i22_013510 PF00950 ABC 3 transport family L3i22_013520 PF00005 ABC transporter L3i22_013530 PF01297 Zinc-uptake complex component A periplasmic L3i22_013530 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment L3i22_013570 PF03129 Anticodon binding domain L3i22_013570 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) L3i22_013590 PF02625 XdhC and CoxI family L3i22_013590 PF13478 XdhC Rossmann domain L3i22_013610 PF01207 Dihydrouridine synthase (Dus) L3i22_013630 PF13421 SPFH domain-Band 7 family L3i22_013660 PF03259 Roadblock/LC7 domain L3i22_013700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L3i22_013710 PF01966 HD domain L3i22_013710 PF13286 Phosphohydrolase-associated domain L3i22_013720 PF08278 DNA primase DnaG DnaB-binding L3i22_013720 PF10410 DnaB-helicase binding domain of primase L3i22_013720 PF01807 CHC2 zinc finger L3i22_013720 PF13662 Toprim domain L3i22_013720 PF08275 DNA primase catalytic core, N-terminal domain L3i22_013740 PF00005 ABC transporter L3i22_013770 PF03631 Virulence factor BrkB L3i22_013800 PF01593 Flavin containing amine oxidoreductase L3i22_013820 PF02899 Phage integrase, N-terminal SAM-like domain L3i22_013820 PF00589 Phage integrase family L3i22_013870 PF12728 Helix-turn-helix domain L3i22_013910 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system L3i22_013920 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system L3i22_014050 PF00005 ABC transporter L3i22_014060 PF12399 Branched-chain amino acid ATP-binding cassette transporter L3i22_014060 PF00005 ABC transporter L3i22_014080 PF02653 Branched-chain amino acid transport system / permease component L3i22_014110 PF00756 Putative esterase L3i22_014110 PF00331 Glycosyl hydrolase family 10 L3i22_014240 PF13977 BetI-type transcriptional repressor, C-terminal L3i22_014240 PF00440 Bacterial regulatory proteins, tetR family L3i22_014250 PF12706 Beta-lactamase superfamily domain L3i22_014290 PF18370 Rhamnogalacturonan I lyases beta-sheet domain L3i22_014340 PF07690 Major Facilitator Superfamily L3i22_014380 PF03485 Arginyl tRNA synthetase N terminal domain L3i22_014380 PF05746 DALR anticodon binding domain L3i22_014380 PF00750 tRNA synthetases class I (R) L3i22_014390 PF02872 5'-nucleotidase, C-terminal domain L3i22_014390 PF00149 Calcineurin-like phosphoesterase L3i22_014410 PF13411 MerR HTH family regulatory protein L3i22_014420 PF00069 Protein kinase domain L3i22_014460 PF01975 Survival protein SurE L3i22_014470 PF00294 pfkB family carbohydrate kinase L3i22_014470 PF01467 Cytidylyltransferase-like L3i22_014480 PF01545 Cation efflux family L3i22_014490 PF13538 UvrD-like helicase C-terminal domain L3i22_014540 PF01915 Glycosyl hydrolase family 3 C-terminal domain L3i22_014540 PF00933 Glycosyl hydrolase family 3 N terminal domain L3i22_014550 PF02801 Beta-ketoacyl synthase, C-terminal domain L3i22_014550 PF00109 Beta-ketoacyl synthase, N-terminal domain L3i22_014560 PF00550 Phosphopantetheine attachment site L3i22_014570 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III L3i22_014570 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal L3i22_014580 PF00698 Acyl transferase domain L3i22_014590 PF17853 GGDEF-like domain L3i22_014590 PF13556 PucR C-terminal helix-turn-helix domain L3i22_014640 PF00749 tRNA synthetases class I (E and Q), catalytic domain L3i22_014660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L3i22_014670 PF00456 Transketolase, thiamine diphosphate binding domain L3i22_014670 PF17831 Pyruvate dehydrogenase E1 component middle domain L3i22_014680 PF01894 Uncharacterised protein family UPF0047 L3i22_014700 PF11253 Protein of unknown function (DUF3052) L3i22_014710 PF00578 AhpC/TSA family L3i22_014780 PF01784 NIF3 (NGG1p interacting factor 3) L3i22_014800 PF13456 Reverse transcriptase-like L3i22_014800 PF00300 Histidine phosphatase superfamily (branch 1) L3i22_014810 PF00553 Cellulose binding domain L3i22_014810 PF00041 Fibronectin type III domain L3i22_014810 PF00704 Glycosyl hydrolases family 18 L3i22_014830 PF00474 Sodium:solute symporter family L3i22_014870 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain L3i22_014870 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain L3i22_014880 PF13291 ACT domain L3i22_014880 PF00291 Pyridoxal-phosphate dependent enzyme L3i22_014910 PF01209 ubiE/COQ5 methyltransferase family L3i22_014920 PF01118 Semialdehyde dehydrogenase, NAD binding domain L3i22_014920 PF02774 Semialdehyde dehydrogenase, dimerisation domain L3i22_014960 PF00575 S1 RNA binding domain L3i22_014960 PF00773 RNB domain L3i22_014960 PF08206 Ribonuclease B OB domain L3i22_014960 PF08461 Ribonuclease R winged-helix domain L3i22_014960 PF17876 Cold shock domain L3i22_014970 PF02548 Ketopantoate hydroxymethyltransferase L3i22_014980 PF02540 NAD synthase L3i22_014980 PF00795 Carbon-nitrogen hydrolase L3i22_014990 PF03951 Glutamine synthetase, beta-Grasp domain L3i22_014990 PF00120 Glutamine synthetase, catalytic domain L3i22_015010 PF04542 Sigma-70 region 2 L3i22_015010 PF04545 Sigma-70, region 4 L3i22_015020 PF03994 Domain of Unknown Function (DUF350) L3i22_015030 PF06772 Bacterial low temperature requirement A protein (LtrA) L3i22_015050 PF13280 WYL domain L3i22_015080 PF04715 Anthranilate synthase component I, N terminal region L3i22_015080 PF00425 chorismate binding enzyme L3i22_015080 PF00117 Glutamine amidotransferase class-I L3i22_015090 PF08335 GlnD PII-uridylyltransferase L3i22_015090 PF03710 Glutamate-ammonia ligase adenylyltransferase L3i22_015100 PF01047 MarR family L3i22_015140 PF09594 Glycosyltransferase family 87 L3i22_015160 PF00196 Bacterial regulatory proteins, luxR family L3i22_015180 PF00120 Glutamine synthetase, catalytic domain L3i22_015180 PF03951 Glutamine synthetase, beta-Grasp domain L3i22_015280 PF00534 Glycosyl transferases group 1 L3i22_015280 PF13439 Glycosyltransferase Family 4 L3i22_015390 PF00082 Subtilase family L3i22_015400 PF05108 Type VII secretion system ESX-1, transport TM domain B L3i22_015420 PF01580 FtsK/SpoIIIE family L3i22_015450 PF17866 AAA lid domain L3i22_015450 PF00004 ATPase family associated with various cellular activities (AAA) L3i22_015470 PF13829 Domain of unknown function (DUF4191) L3i22_015490 PF00211 Adenylate and Guanylate cyclase catalytic domain L3i22_015490 PF13191 AAA ATPase domain L3i22_015520 PF04055 Radical SAM superfamily L3i22_015520 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family L3i22_015530 PF00152 tRNA synthetases class II (D, K and N) L3i22_015530 PF01336 OB-fold nucleic acid binding domain L3i22_015550 PF03099 Biotin/lipoate A/B protein ligase family L3i22_015570 PF01370 NAD dependent epimerase/dehydratase family L3i22_015570 PF08338 Domain of unknown function (DUF1731) L3i22_015580 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) L3i22_015580 PF00364 Biotin-requiring enzyme L3i22_015580 PF02817 e3 binding domain L3i22_015590 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain L3i22_015590 PF07992 Pyridine nucleotide-disulphide oxidoreductase L3i22_015610 PF00883 Cytosol aminopeptidase family, catalytic domain L3i22_015610 PF02789 Cytosol aminopeptidase family, N-terminal domain L3i22_015620 PF08669 Glycine cleavage T-protein C-terminal barrel domain L3i22_015620 PF01571 Aminomethyltransferase folate-binding domain L3i22_015630 PF02654 Cobalamin-5-phosphate synthase L3i22_015640 PF02277 Phosphoribosyltransferase L3i22_015670 PF00248 Aldo/keto reductase family L3i22_015730 PF09383 NIL domain L3i22_015730 PF00005 ABC transporter L3i22_015750 PF03591 AzlC protein L3i22_015790 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) L3i22_015800 PF02445 Quinolinate synthetase A protein L3i22_015810 PF02595 Glycerate kinase family L3i22_015820 PF01521 Iron-sulphur cluster biosynthesis L3i22_015830 PF00294 pfkB family carbohydrate kinase L3i22_015850 PF01206 Sulfurtransferase TusA L3i22_015860 PF00266 Aminotransferase class-V L3i22_015870 PF00116 Cytochrome C oxidase subunit II, periplasmic domain L3i22_015880 PF12270 Cytochrome c oxidase subunit IV L3i22_015900 PF02885 Glycosyl transferase family, helical bundle domain L3i22_015900 PF00591 Glycosyl transferase family, a/b domain L3i22_015920 PF05425 Copper resistance protein D L3i22_015920 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) L3i22_015940 PF00510 Cytochrome c oxidase subunit III L3i22_015960 PF00034 Cytochrome c L3i22_015960 PF13442 Cytochrome C oxidase, cbb3-type, subunit III L3i22_015970 PF00355 Rieske [2Fe-2S] domain L3i22_015980 PF13631 Cytochrome b(N-terminal)/b6/petB L3i22_016010 PF00483 Nucleotidyl transferase L3i22_016020 PF03099 Biotin/lipoate A/B protein ligase family L3i22_016020 PF00293 NUDIX domain L3i22_016030 PF02824 TGS domain L3i22_016030 PF13291 ACT domain L3i22_016030 PF04607 Region found in RelA / SpoT proteins L3i22_016040 PF00929 Exonuclease L3i22_016040 PF01541 GIY-YIG catalytic domain L3i22_016070 PF01435 Peptidase family M48 L3i22_016070 PF16491 CAAX prenyl protease N-terminal, five membrane helices L3i22_016080 PF00534 Glycosyl transferases group 1 L3i22_016080 PF13439 Glycosyltransferase Family 4 L3i22_016100 PF00005 ABC transporter L3i22_016100 PF00664 ABC transporter transmembrane region L3i22_016160 PF00072 Response regulator receiver domain L3i22_016160 PF00196 Bacterial regulatory proteins, luxR family L3i22_016170 PF07730 Histidine kinase L3i22_016170 PF17200 Single Cache domain 2 L3i22_016200 PF00480 ROK family L3i22_016240 PF00982 Glycosyltransferase family 20 L3i22_016270 PF00027 Cyclic nucleotide-binding domain L3i22_016270 PF13545 Crp-like helix-turn-helix domain L3i22_016290 PF16473 3' exoribonuclease, RNase T-like L3i22_016310 PF07690 Major Facilitator Superfamily L3i22_016320 PF00933 Glycosyl hydrolase family 3 N terminal domain L3i22_016340 PF00480 ROK family L3i22_016350 PF00365 Phosphofructokinase L3i22_016360 PF14748 Pyrroline-5-carboxylate reductase dimerisation L3i22_016360 PF03807 NADP oxidoreductase coenzyme F420-dependent L3i22_016380 PF00255 Glutathione peroxidase L3i22_016390 PF00553 Cellulose binding domain L3i22_016390 PF00041 Fibronectin type III domain L3i22_016390 PF00704 Glycosyl hydrolases family 18 L3i22_016400 PF01474 Class-II DAHP synthetase family L3i22_016410 PF01212 Beta-eliminating lyase L3i22_016440 PF06418 CTP synthase N-terminus L3i22_016440 PF00117 Glutamine amidotransferase class-I L3i22_016450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L3i22_016450 PF03466 LysR substrate binding domain L3i22_016470 PF01261 Xylose isomerase-like TIM barrel L3i22_016480 PF00069 Protein kinase domain L3i22_016480 PF03793 PASTA domain L3i22_016530 PF00348 Polyprenyl synthetase L3i22_016540 PF02219 Methylenetetrahydrofolate reductase L3i22_016580 PF07690 Major Facilitator Superfamily L3i22_016690 PF01494 FAD binding domain L3i22_016700 PF00440 Bacterial regulatory proteins, tetR family L3i22_016710 PF00440 Bacterial regulatory proteins, tetR family L3i22_016710 PF17925 Tetracyclin repressor-like, C-terminal domain L3i22_016730 PF13085 2Fe-2S iron-sulfur cluster binding domain L3i22_016740 PF02910 Fumarate reductase flavoprotein C-term L3i22_016740 PF00890 FAD binding domain L3i22_016770 PF13649 Methyltransferase domain L3i22_016790 PF01593 Flavin containing amine oxidoreductase L3i22_016840 PF00106 short chain dehydrogenase L3i22_016910 PF07733 Bacterial DNA polymerase III alpha NTPase domain L3i22_016910 PF17657 Bacterial DNA polymerase III alpha subunit finger domain L3i22_016910 PF14579 Helix-hairpin-helix motif L3i22_016910 PF02811 PHP domain L3i22_016960 PF13559 Domain of unknown function (DUF4129) L3i22_016960 PF11992 Domain of unknown function (DUF3488) L3i22_016960 PF01841 Transglutaminase-like superfamily L3i22_016980 PF07726 ATPase family associated with various cellular activities (AAA) L3i22_016980 PF17863 AAA lid domain L3i22_016990 PF09334 tRNA synthetases class I (M) L3i22_016990 PF13603 Leucyl-tRNA synthetase, Domain 2 L3i22_016990 PF08264 Anticodon-binding domain of tRNA L3i22_017010 PF07685 CobB/CobQ-like glutamine amidotransferase domain L3i22_017040 PF02381 MraZ protein, putative antitoxin-like L3i22_017050 PF01795 MraW methylase family L3i22_017070 PF03717 Penicillin-binding Protein dimerisation domain L3i22_017070 PF00905 Penicillin binding protein transpeptidase domain L3i22_017080 PF08245 Mur ligase middle domain L3i22_017080 PF02875 Mur ligase family, glutamate ligase domain L3i22_017080 PF01225 Mur ligase family, catalytic domain L3i22_017090 PF02875 Mur ligase family, glutamate ligase domain L3i22_017090 PF01225 Mur ligase family, catalytic domain L3i22_017090 PF08245 Mur ligase middle domain L3i22_017100 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 L3i22_017100 PF00953 Glycosyl transferase family 4 L3i22_017120 PF01098 Cell cycle protein L3i22_017130 PF04101 Glycosyltransferase family 28 C-terminal domain L3i22_017130 PF03033 Glycosyltransferase family 28 N-terminal domain L3i22_017140 PF01225 Mur ligase family, catalytic domain L3i22_017140 PF02875 Mur ligase family, glutamate ligase domain L3i22_017140 PF08245 Mur ligase middle domain L3i22_017150 PF08478 POTRA domain, FtsQ-type L3i22_017150 PF03799 Cell division protein FtsQ L3i22_017160 PF12327 FtsZ family, C-terminal domain L3i22_017160 PF00091 Tubulin/FtsZ family, GTPase domain L3i22_017170 PF01168 Alanine racemase, N-terminal domain L3i22_017180 PF04472 Cell division protein SepF L3i22_017200 PF05103 DivIVA protein L3i22_017240 PF01252 Signal peptidase (SPase) II L3i22_017250 PF00849 RNA pseudouridylate synthase L3i22_017280 PF17657 Bacterial DNA polymerase III alpha subunit finger domain L3i22_017280 PF02811 PHP domain L3i22_017280 PF14579 Helix-hairpin-helix motif L3i22_017280 PF07733 Bacterial DNA polymerase III alpha NTPase domain L3i22_017300 PF02190 ATP-dependent protease La (LON) substrate-binding domain L3i22_017300 PF05362 Lon protease (S16) C-terminal proteolytic domain L3i22_017300 PF00004 ATPase family associated with various cellular activities (AAA) L3i22_017320 PF00815 Histidinol dehydrogenase L3i22_017330 PF00155 Aminotransferase class I and II L3i22_017340 PF00475 Imidazoleglycerol-phosphate dehydratase L3i22_017350 PF00117 Glutamine amidotransferase class-I L3i22_017370 PF00977 Histidine biosynthesis protein L3i22_017380 PF00892 EamA-like transporter family L3i22_017390 PF00977 Histidine biosynthesis protein L3i22_017420 PF00155 Aminotransferase class I and II L3i22_017440 PF00501 AMP-binding enzyme L3i22_017450 PF00294 pfkB family carbohydrate kinase L3i22_017470 PF00392 Bacterial regulatory proteins, gntR family L3i22_017470 PF00155 Aminotransferase class I and II L3i22_017510 PF00005 ABC transporter L3i22_017510 PF00664 ABC transporter transmembrane region L3i22_017520 PF00664 ABC transporter transmembrane region L3i22_017520 PF00005 ABC transporter L3i22_017530 PF00163 Ribosomal protein S4/S9 N-terminal domain L3i22_017530 PF01479 S4 domain L3i22_017560 PF01502 Phosphoribosyl-AMP cyclohydrolase L3i22_017570 PF00425 chorismate binding enzyme L3i22_017570 PF04715 Anthranilate synthase component I, N terminal region L3i22_017600 PF00218 Indole-3-glycerol phosphate synthase L3i22_017610 PF00291 Pyridoxal-phosphate dependent enzyme L3i22_017620 PF00290 Tryptophan synthase alpha chain L3i22_017630 PF01243 Pyridoxamine 5'-phosphate oxidase L3i22_017630 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region L3i22_017640 PF01790 Prolipoprotein diacylglyceryl transferase L3i22_017650 PF01494 FAD binding domain L3i22_017670 PF00310 Glutamine amidotransferases class-II L3i22_017670 PF04898 Glutamate synthase central domain L3i22_017670 PF01645 Conserved region in glutamate synthase L3i22_017670 PF01493 GXGXG motif L3i22_017680 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster L3i22_017680 PF07992 Pyridine nucleotide-disulphide oxidoreductase L3i22_017690 PF00224 Pyruvate kinase, barrel domain L3i22_017690 PF02887 Pyruvate kinase, alpha/beta domain L3i22_017720 PF03861 ANTAR domain L3i22_017720 PF00072 Response regulator receiver domain L3i22_017730 PF02653 Branched-chain amino acid transport system / permease component L3i22_017740 PF02653 Branched-chain amino acid transport system / permease component L3i22_017740 PF11862 Domain of unknown function (DUF3382) L3i22_017750 PF00005 ABC transporter L3i22_017750 PF12399 Branched-chain amino acid ATP-binding cassette transporter L3i22_017760 PF00005 ABC transporter L3i22_017780 PF00497 Bacterial extracellular solute-binding proteins, family 3 L3i22_017790 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_017800 PF00005 ABC transporter L3i22_017810 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain L3i22_017810 PF00476 DNA polymerase family A L3i22_017810 PF01367 5'-3' exonuclease, C-terminal SAM fold L3i22_017830 PF01209 ubiE/COQ5 methyltransferase family L3i22_017840 PF00575 S1 RNA binding domain L3i22_017850 PF01121 Dephospho-CoA kinase L3i22_017850 PF04229 GrpB protein L3i22_017870 PF02151 UvrB/uvrC motif L3i22_017870 PF12344 Ultra-violet resistance protein B L3i22_017870 PF00271 Helicase conserved C-terminal domain L3i22_017870 PF17757 UvrB interaction domain L3i22_017870 PF04851 Type III restriction enzyme, res subunit L3i22_017900 PF03741 Integral membrane protein TerC family L3i22_017910 PF00679 Elongation factor G C-terminus L3i22_017910 PF14492 Elongation Factor G, domain II L3i22_017910 PF03144 Elongation factor Tu domain 2 L3i22_017910 PF00009 Elongation factor Tu GTP binding domain L3i22_017930 PF00298 Ribosomal protein L11, RNA binding domain L3i22_017930 PF03946 Ribosomal protein L11, N-terminal domain L3i22_017940 PF00574 Clp protease L3i22_017950 PF07729 FCD domain L3i22_017950 PF00392 Bacterial regulatory proteins, gntR family L3i22_017960 PF00069 Protein kinase domain L3i22_017970 PF00657 GDSL-like Lipase/Acylhydrolase L3i22_017980 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin L3i22_017990 PF01177 Asp/Glu/Hydantoin racemase L3i22_018030 PF16123 Hydroxyacylglutathione hydrolase C-terminus L3i22_018030 PF00753 Metallo-beta-lactamase superfamily L3i22_018050 PF03193 RsgA GTPase L3i22_018070 PF00005 ABC transporter L3i22_018070 PF17755 UvrA DNA-binding domain L3i22_018070 PF17760 UvrA interaction domain L3i22_018090 PF01541 GIY-YIG catalytic domain L3i22_018090 PF08459 UvrC Helix-hairpin-helix N-terminal L3i22_018090 PF02151 UvrB/uvrC motif L3i22_018100 PF03668 P-loop ATPase protein family L3i22_018110 PF01933 Uncharacterised protein family UPF0052 L3i22_018120 PF10298 WhiA N-terminal LAGLIDADG-like domain L3i22_018120 PF14527 WhiA LAGLIDADG-like domain L3i22_018120 PF02650 WhiA C-terminal HTH domain L3i22_018130 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain L3i22_018130 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain L3i22_018140 PF00162 Phosphoglycerate kinase L3i22_018150 PF00121 Triosephosphate isomerase L3i22_018170 PF03840 Preprotein translocase SecG subunit L3i22_018210 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase L3i22_018230 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain L3i22_018230 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain L3i22_018240 PF00923 Transaldolase/Fructose-6-phosphate aldolase L3i22_018250 PF02780 Transketolase, C-terminal domain L3i22_018250 PF02779 Transketolase, pyrimidine binding domain L3i22_018250 PF00456 Transketolase, thiamine diphosphate binding domain L3i22_018260 PF01040 UbiA prenyltransferase family L3i22_018310 PF01458 Uncharacterized protein family (UPF0051) L3i22_018320 PF01458 Uncharacterized protein family (UPF0051) L3i22_018340 PF00005 ABC transporter L3i22_018350 PF00266 Aminotransferase class-V L3i22_018360 PF01592 NifU-like N terminal domain L3i22_018370 PF01883 Iron-sulfur cluster assembly protein L3i22_018410 PF00561 alpha/beta hydrolase fold L3i22_018490 PF04228 Putative neutral zinc metallopeptidase L3i22_018500 PF00005 ABC transporter L3i22_018500 PF12848 ABC transporter L3i22_018530 PF00378 Enoyl-CoA hydratase/isomerase L3i22_018540 PF00005 ABC transporter L3i22_018540 PF00664 ABC transporter transmembrane region L3i22_018560 PF03167 Uracil DNA glycosylase superfamily L3i22_018620 PF00440 Bacterial regulatory proteins, tetR family L3i22_018640 PF10944 Protein of unknown function (DUF2630) L3i22_018660 PF00330 Aconitase family (aconitate hydratase) L3i22_018660 PF00694 Aconitase C-terminal domain L3i22_018680 PF17967 Pullulanase N2 domain L3i22_018680 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) L3i22_018680 PF11852 Domain of unknown function (DUF3372) L3i22_018680 PF03714 Bacterial pullanase-associated domain L3i22_018680 PF18494 Pullulanase Ins domain L3i22_018720 PF05195 Aminopeptidase P, N-terminal domain L3i22_018720 PF00557 Metallopeptidase family M24 L3i22_018740 PF00294 pfkB family carbohydrate kinase L3i22_018790 PF17863 AAA lid domain L3i22_018790 PF07726 ATPase family associated with various cellular activities (AAA) L3i22_018800 PF01882 Protein of unknown function DUF58 L3i22_018810 PF13519 von Willebrand factor type A domain L3i22_018820 PF00196 Bacterial regulatory proteins, luxR family L3i22_018820 PF00072 Response regulator receiver domain L3i22_018830 PF07730 Histidine kinase L3i22_018860 PF00762 Ferrochelatase L3i22_018870 PF13344 Haloacid dehalogenase-like hydrolase L3i22_018930 PF00293 NUDIX domain L3i22_018930 PF13344 Haloacid dehalogenase-like hydrolase L3i22_018980 PF00392 Bacterial regulatory proteins, gntR family L3i22_018980 PF00155 Aminotransferase class I and II L3i22_019000 PF00144 Beta-lactamase L3i22_019020 PF01145 SPFH domain / Band 7 family L3i22_019070 PF00588 SpoU rRNA Methylase family L3i22_019080 PF00111 2Fe-2S iron-sulfur cluster binding domain L3i22_019080 PF00970 Oxidoreductase FAD-binding domain L3i22_019080 PF00175 Oxidoreductase NAD-binding domain L3i22_019110 PF08245 Mur ligase middle domain L3i22_019130 PF01380 SIS domain L3i22_019130 PF01418 Helix-turn-helix domain, rpiR family L3i22_019140 PF01547 Bacterial extracellular solute-binding protein L3i22_019150 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_019160 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_019170 PF01547 Bacterial extracellular solute-binding protein L3i22_019180 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_019190 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_019200 PF01367 5'-3' exonuclease, C-terminal SAM fold L3i22_019200 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain L3i22_019200 PF00476 DNA polymerase family A L3i22_019200 PF01612 3'-5' exonuclease L3i22_019210 PF02310 B12 binding domain L3i22_019210 PF02607 B12 binding domain L3i22_019210 PF02965 Vitamin B12 dependent methionine synthase, activation domain L3i22_019210 PF00809 Pterin binding enzyme L3i22_019210 PF02574 Homocysteine S-methyltransferase L3i22_019260 PF00072 Response regulator receiver domain L3i22_019260 PF00196 Bacterial regulatory proteins, luxR family L3i22_019270 PF13344 Haloacid dehalogenase-like hydrolase L3i22_019270 PF00293 NUDIX domain L3i22_019280 PF00990 Diguanylate cyclase, GGDEF domain L3i22_019280 PF00072 Response regulator receiver domain L3i22_019330 PF00117 Glutamine amidotransferase class-I L3i22_019330 PF00425 chorismate binding enzyme L3i22_019350 PF00486 Transcriptional regulatory protein, C terminal L3i22_019350 PF00072 Response regulator receiver domain L3i22_019380 PF00933 Glycosyl hydrolase family 3 N terminal domain L3i22_019380 PF14310 Fibronectin type III-like domain L3i22_019380 PF01915 Glycosyl hydrolase family 3 C-terminal domain L3i22_019420 PF03733 Inner membrane component domain L3i22_019480 PF01095 Pectinesterase L3i22_019490 PF01070 FMN-dependent dehydrogenase L3i22_019500 PF00817 impB/mucB/samB family L3i22_019500 PF11799 impB/mucB/samB family C-terminal domain L3i22_019500 PF00817 impB/mucB/samB family L3i22_019500 PF11799 impB/mucB/samB family C-terminal domain L3i22_019510 PF00115 Cytochrome C and Quinol oxidase polypeptide I L3i22_019530 PF00440 Bacterial regulatory proteins, tetR family L3i22_019530 PF17933 Tetracyclin repressor-like, C-terminal domain L3i22_019550 PF00440 Bacterial regulatory proteins, tetR family L3i22_019550 PF16859 Tetracyclin repressor-like, C-terminal domain L3i22_019590 PF00501 AMP-binding enzyme L3i22_019590 PF13193 AMP-binding enzyme C-terminal domain L3i22_019610 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal L3i22_019610 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III L3i22_019620 PF00069 Protein kinase domain L3i22_019690 PF07995 Glucose / Sorbosone dehydrogenase L3i22_019710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_019710 PF00512 His Kinase A (phospho-acceptor) domain L3i22_019720 PF10042 Uncharacterized conserved protein (DUF2278) L3i22_019760 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family L3i22_019770 PF00440 Bacterial regulatory proteins, tetR family L3i22_019770 PF08361 MAATS-type transcriptional repressor, C-terminal region L3i22_019780 PF02040 Arsenical pump membrane protein L3i22_019790 PF00571 CBS domain L3i22_019790 PF03471 Transporter associated domain L3i22_019790 PF01595 Cyclin M transmembrane N-terminal domain L3i22_019810 PF03814 Potassium-transporting ATPase A subunit L3i22_019830 PF02669 K+-transporting ATPase, c chain L3i22_019840 PF02702 Osmosensitive K+ channel His kinase sensor domain L3i22_019840 PF00512 His Kinase A (phospho-acceptor) domain L3i22_019840 PF00582 Universal stress protein family L3i22_019840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_019840 PF13493 Domain of unknown function (DUF4118) L3i22_019850 PF00072 Response regulator receiver domain L3i22_019850 PF00486 Transcriptional regulatory protein, C terminal L3i22_019860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L3i22_019860 PF17200 Single Cache domain 2 L3i22_019860 PF00672 HAMP domain L3i22_019920 PF07690 Major Facilitator Superfamily L3i22_019940 PF01568 Molydopterin dinucleotide binding domain L3i22_019940 PF00384 Molybdopterin oxidoreductase L3i22_019950 PF09084 NMT1/THI5 like L3i22_019960 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_019970 PF00005 ABC transporter L3i22_019990 PF00581 Rhodanese-like domain L3i22_020010 PF00485 Phosphoribulokinase / Uridine kinase family L3i22_020020 PF05368 NmrA-like family L3i22_020030 PF12849 PBP superfamily domain L3i22_020050 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_020060 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_020080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_020080 PF00512 His Kinase A (phospho-acceptor) domain L3i22_020080 PF00672 HAMP domain L3i22_020080 PF18698 Histidine kinase sensor domain L3i22_020090 PF00486 Transcriptional regulatory protein, C terminal L3i22_020090 PF00072 Response regulator receiver domain L3i22_020100 PF00042 Globin L3i22_020100 PF00970 Oxidoreductase FAD-binding domain L3i22_020100 PF00175 Oxidoreductase NAD-binding domain L3i22_020110 PF02082 Transcriptional regulator L3i22_020120 PF13493 Domain of unknown function (DUF4118) L3i22_020120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_020120 PF02702 Osmosensitive K+ channel His kinase sensor domain L3i22_020120 PF13492 GAF domain L3i22_020120 PF00512 His Kinase A (phospho-acceptor) domain L3i22_020130 PF11808 Phosphate regulon sensor protein PhoR L3i22_020130 PF00989 PAS fold L3i22_020130 PF00512 His Kinase A (phospho-acceptor) domain L3i22_020130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_020150 PF00107 Zinc-binding dehydrogenase L3i22_020150 PF08240 Alcohol dehydrogenase GroES-like domain L3i22_020160 PF02909 Tetracyclin repressor-like, C-terminal domain L3i22_020160 PF00440 Bacterial regulatory proteins, tetR family L3i22_020170 PF01627 Hpt domain L3i22_020170 PF00497 Bacterial extracellular solute-binding proteins, family 3 L3i22_020170 PF00512 His Kinase A (phospho-acceptor) domain L3i22_020170 PF00072 Response regulator receiver domain L3i22_020170 PF00989 PAS fold L3i22_020170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_020190 PF01494 FAD binding domain L3i22_020220 PF16736 Single Cache-like L3i22_020220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_020220 PF00512 His Kinase A (phospho-acceptor) domain L3i22_020220 PF00989 PAS fold L3i22_020230 PF00512 His Kinase A (phospho-acceptor) domain L3i22_020230 PF01590 GAF domain L3i22_020230 PF08446 PAS fold L3i22_020230 PF00360 Phytochrome region L3i22_020230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_020280 PF13649 Methyltransferase domain L3i22_020300 PF00248 Aldo/keto reductase family L3i22_020310 PF00155 Aminotransferase class I and II L3i22_020390 PF00512 His Kinase A (phospho-acceptor) domain L3i22_020390 PF00672 HAMP domain L3i22_020390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_020390 PF00989 PAS fold L3i22_020420 PF00437 Type II/IV secretion system protein L3i22_020430 PF10609 NUBPL iron-transfer P-loop NTPase L3i22_020470 PF00486 Transcriptional regulatory protein, C terminal L3i22_020470 PF00072 Response regulator receiver domain L3i22_020480 PF13407 Periplasmic binding protein domain L3i22_020490 PF00005 ABC transporter L3i22_020500 PF02653 Branched-chain amino acid transport system / permease component L3i22_020510 PF02653 Branched-chain amino acid transport system / permease component L3i22_020550 PF12146 Serine aminopeptidase, S33 L3i22_020580 PF01699 Sodium/calcium exchanger protein L3i22_020620 PF00781 Diacylglycerol kinase catalytic domain L3i22_020640 PF00535 Glycosyl transferase family 2 L3i22_020650 PF00534 Glycosyl transferases group 1 L3i22_020700 PF07992 Pyridine nucleotide-disulphide oxidoreductase L3i22_020700 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain L3i22_020740 PF13443 Cro/C1-type HTH DNA-binding domain L3i22_020770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_020770 PF00672 HAMP domain L3i22_020770 PF00512 His Kinase A (phospho-acceptor) domain L3i22_020780 PF00486 Transcriptional regulatory protein, C terminal L3i22_020780 PF00072 Response regulator receiver domain L3i22_020820 PF16123 Hydroxyacylglutathione hydrolase C-terminus L3i22_020820 PF00753 Metallo-beta-lactamase superfamily L3i22_020850 PF02627 Carboxymuconolactone decarboxylase family L3i22_020860 PF13411 MerR HTH family regulatory protein L3i22_020980 PF03793 PASTA domain L3i22_020980 PF00069 Protein kinase domain L3i22_021000 PF06271 RDD family L3i22_021020 PF03900 Porphobilinogen deaminase, C-terminal domain L3i22_021020 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain L3i22_021110 PF00069 Protein kinase domain L3i22_021110 PF13462 Thioredoxin L3i22_021130 PF01594 AI-2E family transporter L3i22_021140 PF00155 Aminotransferase class I and II L3i22_021170 PF00128 Alpha amylase, catalytic domain L3i22_021170 PF03423 Carbohydrate binding domain (family 25) L3i22_021170 PF01373 Glycosyl hydrolase family 14 L3i22_021200 PF00989 PAS fold L3i22_021200 PF00512 His Kinase A (phospho-acceptor) domain L3i22_021200 PF00672 HAMP domain L3i22_021200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_021210 PF01433 Peptidase family M1 domain L3i22_021210 PF11838 ERAP1-like C-terminal domain L3i22_021220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L3i22_021220 PF00672 HAMP domain L3i22_021220 PF02743 Cache domain L3i22_021250 PF13302 Acetyltransferase (GNAT) domain L3i22_021260 PF01522 Polysaccharide deacetylase L3i22_021260 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain L3i22_021290 PF00144 Beta-lactamase L3i22_021300 PF07859 alpha/beta hydrolase fold L3i22_021310 PF00440 Bacterial regulatory proteins, tetR family L3i22_021310 PF17932 Tetracyclin repressor-like, C-terminal domain L3i22_021350 PF08338 Domain of unknown function (DUF1731) L3i22_021350 PF01370 NAD dependent epimerase/dehydratase family L3i22_021370 PF01842 ACT domain L3i22_021370 PF00551 Formyl transferase L3i22_021400 PF03466 LysR substrate binding domain L3i22_021400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L3i22_021430 PF01384 Phosphate transporter family L3i22_021440 PF00657 GDSL-like Lipase/Acylhydrolase L3i22_021470 PF05103 DivIVA protein L3i22_021600 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_021610 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_021630 PF16347 Domain of unknown function (DUF4976) L3i22_021630 PF00884 Sulfatase L3i22_021680 PF13191 AAA ATPase domain L3i22_021680 PF00211 Adenylate and Guanylate cyclase catalytic domain L3i22_021700 PF03704 Bacterial transcriptional activator domain L3i22_021700 PF00486 Transcriptional regulatory protein, C terminal L3i22_021700 PF00931 NB-ARC domain L3i22_021720 PF13188 PAS domain L3i22_021720 PF00072 Response regulator receiver domain L3i22_021720 PF08448 PAS fold L3i22_021720 PF00512 His Kinase A (phospho-acceptor) domain L3i22_021720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_021730 PF06452 Carbohydrate family 9 binding domain-like L3i22_021730 PF02018 Carbohydrate binding domain L3i22_021730 PF00331 Glycosyl hydrolase family 10 L3i22_021730 PF00395 S-layer homology domain L3i22_021790 PF07690 Major Facilitator Superfamily L3i22_021800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L3i22_021800 PF00672 HAMP domain L3i22_021890 PF00356 Bacterial regulatory proteins, lacI family L3i22_021930 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_021940 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_021960 PF07470 Glycosyl Hydrolase Family 88 L3i22_021970 PF04962 KduI/IolB family L3i22_022010 PF00082 Subtilase family L3i22_022020 PF08447 PAS fold L3i22_022020 PF08448 PAS fold L3i22_022020 PF00563 EAL domain L3i22_022020 PF00990 Diguanylate cyclase, GGDEF domain L3i22_022030 PF10145 Phage-related minor tail protein L3i22_022030 PF01464 Transglycosylase SLT domain L3i22_022030 PF01551 Peptidase family M23 L3i22_022050 PF00072 Response regulator receiver domain L3i22_022050 PF00196 Bacterial regulatory proteins, luxR family L3i22_022130 PF01568 Molydopterin dinucleotide binding domain L3i22_022130 PF00384 Molybdopterin oxidoreductase L3i22_022130 PF04879 Molybdopterin oxidoreductase Fe4S4 domain L3i22_022170 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain L3i22_022170 PF00378 Enoyl-CoA hydratase/isomerase L3i22_022170 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain L3i22_022180 PF02803 Thiolase, C-terminal domain L3i22_022180 PF00108 Thiolase, N-terminal domain L3i22_022190 PF00501 AMP-binding enzyme L3i22_022210 PF13439 Glycosyltransferase Family 4 L3i22_022210 PF00534 Glycosyl transferases group 1 L3i22_022230 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 L3i22_022230 PF00535 Glycosyl transferase family 2 L3i22_022260 PF00392 Bacterial regulatory proteins, gntR family L3i22_022260 PF07729 FCD domain L3i22_022270 PF00171 Aldehyde dehydrogenase family L3i22_022280 PF00441 Acyl-CoA dehydrogenase, C-terminal domain L3i22_022280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain L3i22_022280 PF02770 Acyl-CoA dehydrogenase, middle domain L3i22_022290 PF00563 EAL domain L3i22_022290 PF00990 Diguanylate cyclase, GGDEF domain L3i22_022290 PF03707 Bacterial signalling protein N terminal repeat L3i22_022300 PF00392 Bacterial regulatory proteins, gntR family L3i22_022330 PF05762 VWA domain containing CoxE-like protein L3i22_022340 PF07728 AAA domain (dynein-related subfamily) L3i22_022400 PF02785 Biotin carboxylase C-terminal domain L3i22_022400 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain L3i22_022400 PF00289 Biotin carboxylase, N-terminal domain L3i22_022490 PF13087 AAA domain L3i22_022490 PF13195 Protein of unknown function (DUF4011) L3i22_022490 PF13086 AAA domain L3i22_022520 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_022530 PF00005 ABC transporter L3i22_022650 PF02782 FGGY family of carbohydrate kinases, C-terminal domain L3i22_022650 PF00370 FGGY family of carbohydrate kinases, N-terminal domain L3i22_022660 PF00202 Aminotransferase class-III L3i22_022670 PF13556 PucR C-terminal helix-turn-helix domain L3i22_022670 PF17853 GGDEF-like domain L3i22_022680 PF01757 Acyltransferase family L3i22_022700 PF12894 Anaphase-promoting complex subunit 4 WD40 domain L3i22_022700 PF00400 WD domain, G-beta repeat L3i22_022730 PF00067 Cytochrome P450 L3i22_022740 PF01494 FAD binding domain L3i22_022760 PF00553 Cellulose binding domain L3i22_022760 PF01341 Glycosyl hydrolases family 6 L3i22_022780 PF00210 Ferritin-like domain L3i22_022800 PF13488 Glycine zipper L3i22_022800 PF00691 OmpA family L3i22_022850 PF00106 short chain dehydrogenase L3i22_022860 PF08362 YcdC-like protein, C-terminal region L3i22_022860 PF00440 Bacterial regulatory proteins, tetR family L3i22_022870 PF01374 Glycosyl hydrolase family 46 L3i22_022890 PF01547 Bacterial extracellular solute-binding protein L3i22_022900 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_022910 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_022920 PF02056 Family 4 glycosyl hydrolase L3i22_022920 PF11975 Family 4 glycosyl hydrolase C-terminal domain L3i22_022950 PF05576 PS-10 peptidase S37 L3i22_022980 PF01522 Polysaccharide deacetylase L3i22_023010 PF02129 X-Pro dipeptidyl-peptidase (S15 family) L3i22_023010 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain L3i22_023050 PF00486 Transcriptional regulatory protein, C terminal L3i22_023050 PF00931 NB-ARC domain L3i22_023050 PF03704 Bacterial transcriptional activator domain L3i22_023070 PF04542 Sigma-70 region 2 L3i22_023070 PF04545 Sigma-70, region 4 L3i22_023100 PF12538 DNA transporter L3i22_023100 PF01580 FtsK/SpoIIIE family L3i22_023240 PF01580 FtsK/SpoIIIE family L3i22_023280 PF00004 ATPase family associated with various cellular activities (AAA) L3i22_023280 PF17866 AAA lid domain L3i22_023300 PF00561 alpha/beta hydrolase fold L3i22_023310 PF00486 Transcriptional regulatory protein, C terminal L3i22_023310 PF03704 Bacterial transcriptional activator domain L3i22_023400 PF00072 Response regulator receiver domain L3i22_023400 PF00196 Bacterial regulatory proteins, luxR family L3i22_023420 PF03704 Bacterial transcriptional activator domain L3i22_023420 PF00486 Transcriptional regulatory protein, C terminal L3i22_023420 PF00931 NB-ARC domain L3i22_023430 PF00931 NB-ARC domain L3i22_023430 PF00486 Transcriptional regulatory protein, C terminal L3i22_023430 PF03704 Bacterial transcriptional activator domain L3i22_023440 PF00004 ATPase family associated with various cellular activities (AAA) L3i22_023440 PF07724 AAA domain (Cdc48 subfamily) L3i22_023440 PF10431 C-terminal, D2-small domain, of ClpB protein L3i22_023440 PF17871 AAA lid domain L3i22_023450 PF00072 Response regulator receiver domain L3i22_023450 PF00196 Bacterial regulatory proteins, luxR family L3i22_023460 PF03704 Bacterial transcriptional activator domain L3i22_023460 PF00486 Transcriptional regulatory protein, C terminal L3i22_023480 PF02771 Acyl-CoA dehydrogenase, N-terminal domain L3i22_023480 PF02770 Acyl-CoA dehydrogenase, middle domain L3i22_023480 PF00441 Acyl-CoA dehydrogenase, C-terminal domain L3i22_023490 PF00364 Biotin-requiring enzyme L3i22_023490 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain L3i22_023490 PF02785 Biotin carboxylase C-terminal domain L3i22_023490 PF00289 Biotin carboxylase, N-terminal domain L3i22_023500 PF01039 Carboxyl transferase domain L3i22_023510 PF00682 HMGL-like L3i22_023520 PF00440 Bacterial regulatory proteins, tetR family L3i22_023530 PF00106 short chain dehydrogenase L3i22_023560 PF00440 Bacterial regulatory proteins, tetR family L3i22_023560 PF08362 YcdC-like protein, C-terminal region L3i22_023610 PF03707 Bacterial signalling protein N terminal repeat L3i22_023610 PF00563 EAL domain L3i22_023610 PF00990 Diguanylate cyclase, GGDEF domain L3i22_023680 PF17862 AAA+ lid domain L3i22_023680 PF01434 Peptidase family M41 L3i22_023680 PF00004 ATPase family associated with various cellular activities (AAA) L3i22_023750 PF12161 HsdM N-terminal domain L3i22_023750 PF02384 N-6 DNA Methylase L3i22_023770 PF04851 Type III restriction enzyme, res subunit L3i22_023770 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) L3i22_023770 PF00271 Helicase conserved C-terminal domain L3i22_023770 PF08463 EcoEI R protein C-terminal L3i22_023780 PF08241 Methyltransferase domain L3i22_023820 PF14028 Lantibiotic biosynthesis dehydratase C-term L3i22_023820 PF04738 Lantibiotic dehydratase, N terminus L3i22_023930 PF00072 Response regulator receiver domain L3i22_023930 PF00990 Diguanylate cyclase, GGDEF domain L3i22_024020 PF01170 Putative RNA methylase family UPF0020 L3i22_024020 PF02926 THUMP domain L3i22_024020 PF10672 S-adenosylmethionine-dependent methyltransferase L3i22_024140 PF00589 Phage integrase family L3i22_024140 PF02899 Phage integrase, N-terminal SAM-like domain L3i22_024320 PF00012 Hsp70 protein L3i22_024360 PF17863 AAA lid domain L3i22_024360 PF07726 ATPase family associated with various cellular activities (AAA) L3i22_024420 PF13426 PAS domain L3i22_024420 PF00512 His Kinase A (phospho-acceptor) domain L3i22_024420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_024420 PF00672 HAMP domain L3i22_024450 PF07687 Peptidase dimerisation domain L3i22_024450 PF01546 Peptidase family M20/M25/M40 L3i22_024470 PF00266 Aminotransferase class-V L3i22_024480 PF08448 PAS fold L3i22_024480 PF00990 Diguanylate cyclase, GGDEF domain L3i22_024480 PF08447 PAS fold L3i22_024480 PF00563 EAL domain L3i22_024490 PF07971 Glycosyl hydrolase family 92 L3i22_024490 PF17678 Glycosyl hydrolase family 92 N-terminal domain L3i22_024540 PF04552 Sigma-54, DNA binding domain L3i22_024540 PF04963 Sigma-54 factor, core binding domain L3i22_024540 PF00309 Sigma-54 factor, Activator interacting domain (AID) L3i22_024610 PF00158 Sigma-54 interaction domain L3i22_024610 PF00072 Response regulator receiver domain L3i22_024610 PF02954 Bacterial regulatory protein, Fis family L3i22_024630 PF14765 Polyketide synthase dehydratase L3i22_024630 PF00698 Acyl transferase domain L3i22_024630 PF02801 Beta-ketoacyl synthase, C-terminal domain L3i22_024630 PF00109 Beta-ketoacyl synthase, N-terminal domain L3i22_024630 PF16197 Ketoacyl-synthetase C-terminal extension L3i22_024630 PF09277 Erythronolide synthase, docking L3i22_024630 PF08990 Erythronolide synthase docking L3i22_024630 PF00550 Phosphopantetheine attachment site L3i22_024630 PF08659 KR domain L3i22_024630 PF08240 Alcohol dehydrogenase GroES-like domain L3i22_024690 PF00296 Luciferase-like monooxygenase L3i22_024720 PF12680 SnoaL-like domain L3i22_024720 PF04542 Sigma-70 region 2 L3i22_024720 PF08281 Sigma-70, region 4 L3i22_024730 PF07992 Pyridine nucleotide-disulphide oxidoreductase L3i22_024810 PF00356 Bacterial regulatory proteins, lacI family L3i22_024830 PF12695 Alpha/beta hydrolase family L3i22_024850 PF07690 Major Facilitator Superfamily L3i22_024880 PF00596 Class II Aldolase and Adducin N-terminal domain L3i22_024890 PF00370 FGGY family of carbohydrate kinases, N-terminal domain L3i22_024890 PF02782 FGGY family of carbohydrate kinases, C-terminal domain L3i22_024900 PF02754 Cysteine-rich domain L3i22_024910 PF11870 Domain of unknown function (DUF3390) L3i22_024910 PF13183 4Fe-4S dicluster domain L3i22_024910 PF02589 LUD domain L3i22_024920 PF02589 LUD domain L3i22_024930 PF18415 Histidine kinase receptor ArcB trans-membrane domain L3i22_024930 PF00072 Response regulator receiver domain L3i22_024930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_024930 PF00989 PAS fold L3i22_024930 PF00512 His Kinase A (phospho-acceptor) domain L3i22_024930 PF01627 Hpt domain L3i22_024950 PF00072 Response regulator receiver domain L3i22_024950 PF00486 Transcriptional regulatory protein, C terminal L3i22_024960 PF00512 His Kinase A (phospho-acceptor) domain L3i22_024960 PF00989 PAS fold L3i22_024960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_025000 PF12704 MacB-like periplasmic core domain L3i22_025000 PF00005 ABC transporter L3i22_025000 PF02687 FtsX-like permease family L3i22_025010 PF00005 ABC transporter L3i22_025010 PF02687 FtsX-like permease family L3i22_025010 PF12704 MacB-like periplasmic core domain L3i22_025040 PF03176 MMPL family L3i22_025060 PF00512 His Kinase A (phospho-acceptor) domain L3i22_025060 PF00672 HAMP domain L3i22_025060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_025070 PF00072 Response regulator receiver domain L3i22_025070 PF00486 Transcriptional regulatory protein, C terminal L3i22_025130 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain L3i22_025130 PF13378 Enolase C-terminal domain-like L3i22_025190 PF07690 Major Facilitator Superfamily L3i22_025210 PF00202 Aminotransferase class-III L3i22_025260 PF13520 Amino acid permease L3i22_025320 PF00005 ABC transporter L3i22_025320 PF13732 Domain of unknown function (DUF4162) L3i22_025340 PF00144 Beta-lactamase L3i22_025360 PF00561 alpha/beta hydrolase fold L3i22_025390 PF00005 ABC transporter L3i22_025400 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_025410 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_025430 PF09339 IclR helix-turn-helix domain L3i22_025430 PF01614 Bacterial transcriptional regulator L3i22_025480 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_025490 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_025510 PF00356 Bacterial regulatory proteins, lacI family L3i22_025520 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain L3i22_025520 PF02129 X-Pro dipeptidyl-peptidase (S15 family) L3i22_025530 PF00534 Glycosyl transferases group 1 L3i22_025560 PF00905 Penicillin binding protein transpeptidase domain L3i22_025560 PF00912 Transglycosylase L3i22_025630 PF01593 Flavin containing amine oxidoreductase L3i22_025680 PF00246 Zinc carboxypeptidase L3i22_025710 PF01494 FAD binding domain L3i22_025720 PF09339 IclR helix-turn-helix domain L3i22_025720 PF01614 Bacterial transcriptional regulator L3i22_025730 PF00775 Dioxygenase L3i22_025730 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal L3i22_025740 PF00775 Dioxygenase L3i22_025750 PF10397 Adenylosuccinate lyase C-terminus L3i22_025750 PF00206 Lyase L3i22_025760 PF02627 Carboxymuconolactone decarboxylase family L3i22_025780 PF00563 EAL domain L3i22_025780 PF00990 Diguanylate cyclase, GGDEF domain L3i22_025780 PF03707 Bacterial signalling protein N terminal repeat L3i22_025780 PF13188 PAS domain L3i22_025790 PF18416 N-acetylglucosamine binding protein domain 2 L3i22_025790 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading L3i22_025840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L3i22_025840 PF03466 LysR substrate binding domain L3i22_025850 PF01494 FAD binding domain L3i22_025870 PF01557 Fumarylacetoacetate (FAA) hydrolase family L3i22_025880 PF00326 Prolyl oligopeptidase family L3i22_025880 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region L3i22_025920 PF00072 Response regulator receiver domain L3i22_025920 PF00196 Bacterial regulatory proteins, luxR family L3i22_025950 PF08448 PAS fold L3i22_025950 PF00512 His Kinase A (phospho-acceptor) domain L3i22_025950 PF00072 Response regulator receiver domain L3i22_025950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_025950 PF13188 PAS domain L3i22_026000 PF00056 lactate/malate dehydrogenase, NAD binding domain L3i22_026000 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain L3i22_026040 PF00005 ABC transporter L3i22_026050 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_026060 PF02668 Taurine catabolism dioxygenase TauD, TfdA family L3i22_026070 PF00296 Luciferase-like monooxygenase L3i22_026120 PF06969 HemN C-terminal domain L3i22_026120 PF04055 Radical SAM superfamily L3i22_026160 PF01447 Thermolysin metallopeptidase, catalytic domain L3i22_026160 PF02868 Thermolysin metallopeptidase, alpha-helical domain L3i22_026160 PF16485 Protealysin propeptide L3i22_026190 PF04954 Siderophore-interacting protein L3i22_026190 PF08021 Siderophore-interacting FAD-binding domain L3i22_026200 PF00486 Transcriptional regulatory protein, C terminal L3i22_026200 PF00072 Response regulator receiver domain L3i22_026220 PF13581 Histidine kinase-like ATPase domain L3i22_026220 PF08448 PAS fold L3i22_026220 PF07228 Stage II sporulation protein E (SpoIIE) L3i22_026220 PF13466 STAS domain L3i22_026250 PF03951 Glutamine synthetase, beta-Grasp domain L3i22_026250 PF00120 Glutamine synthetase, catalytic domain L3i22_026260 PF00582 Universal stress protein family L3i22_026290 PF07498 Rho termination factor, N-terminal domain L3i22_026290 PF07497 Rho termination factor, RNA-binding domain L3i22_026290 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain L3i22_026310 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain L3i22_026310 PF02129 X-Pro dipeptidyl-peptidase (S15 family) L3i22_026400 PF02909 Tetracyclin repressor-like, C-terminal domain L3i22_026400 PF00440 Bacterial regulatory proteins, tetR family L3i22_026410 PF00441 Acyl-CoA dehydrogenase, C-terminal domain L3i22_026410 PF02770 Acyl-CoA dehydrogenase, middle domain L3i22_026410 PF02771 Acyl-CoA dehydrogenase, N-terminal domain L3i22_026430 PF00441 Acyl-CoA dehydrogenase, C-terminal domain L3i22_026430 PF02770 Acyl-CoA dehydrogenase, middle domain L3i22_026430 PF02771 Acyl-CoA dehydrogenase, N-terminal domain L3i22_026440 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ L3i22_026510 PF07992 Pyridine nucleotide-disulphide oxidoreductase L3i22_026510 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain L3i22_026520 PF00933 Glycosyl hydrolase family 3 N terminal domain L3i22_026520 PF07691 PA14 domain L3i22_026520 PF14310 Fibronectin type III-like domain L3i22_026520 PF01915 Glycosyl hydrolase family 3 C-terminal domain L3i22_026530 PF00356 Bacterial regulatory proteins, lacI family L3i22_026550 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_026560 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_026570 PF13802 Galactose mutarotase-like L3i22_026570 PF01055 Glycosyl hydrolases family 31 L3i22_026630 PF09364 XFP N-terminal domain L3i22_026630 PF09363 XFP C-terminal domain L3i22_026630 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase L3i22_026670 PF00005 ABC transporter L3i22_026710 PF13492 GAF domain L3i22_026710 PF13185 GAF domain L3i22_026710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_026710 PF07730 Histidine kinase L3i22_026720 PF00196 Bacterial regulatory proteins, luxR family L3i22_026720 PF00072 Response regulator receiver domain L3i22_026740 PF00672 HAMP domain L3i22_026740 PF13426 PAS domain L3i22_026740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_026740 PF00512 His Kinase A (phospho-acceptor) domain L3i22_026770 PF08269 Cache domain L3i22_026770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L3i22_026780 PF16736 Single Cache-like L3i22_026780 PF00989 PAS fold L3i22_026780 PF00512 His Kinase A (phospho-acceptor) domain L3i22_026780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_026790 PF02954 Bacterial regulatory protein, Fis family L3i22_026790 PF00158 Sigma-54 interaction domain L3i22_026790 PF00072 Response regulator receiver domain L3i22_026830 PF02653 Branched-chain amino acid transport system / permease component L3i22_026840 PF02653 Branched-chain amino acid transport system / permease component L3i22_026850 PF00005 ABC transporter L3i22_026860 PF13407 Periplasmic binding protein domain L3i22_026890 PF00459 Inositol monophosphatase family L3i22_026900 PF00069 Protein kinase domain L3i22_026900 PF03793 PASTA domain L3i22_026920 PF00155 Aminotransferase class I and II L3i22_026920 PF00392 Bacterial regulatory proteins, gntR family L3i22_026930 PF00171 Aldehyde dehydrogenase family L3i22_026940 PF00202 Aminotransferase class-III L3i22_026950 PF00171 Aldehyde dehydrogenase family L3i22_026960 PF00005 ABC transporter L3i22_026960 PF08402 TOBE domain L3i22_026980 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_026990 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_027000 PF01266 FAD dependent oxidoreductase L3i22_027010 PF00202 Aminotransferase class-III L3i22_027020 PF13411 MerR HTH family regulatory protein L3i22_027040 PF00072 Response regulator receiver domain L3i22_027040 PF00486 Transcriptional regulatory protein, C terminal L3i22_027050 PF08448 PAS fold L3i22_027050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_027050 PF00512 His Kinase A (phospho-acceptor) domain L3i22_027050 PF13426 PAS domain L3i22_027050 PF00072 Response regulator receiver domain L3i22_027060 PF01266 FAD dependent oxidoreductase L3i22_027070 PF01037 Lrp/AsnC ligand binding domain L3i22_027080 PF00202 Aminotransferase class-III L3i22_027090 PF00171 Aldehyde dehydrogenase family L3i22_027100 PF07228 Stage II sporulation protein E (SpoIIE) L3i22_027100 PF13426 PAS domain L3i22_027110 PF00933 Glycosyl hydrolase family 3 N terminal domain L3i22_027110 PF14310 Fibronectin type III-like domain L3i22_027110 PF01915 Glycosyl hydrolase family 3 C-terminal domain L3i22_027130 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_027140 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_027150 PF00356 Bacterial regulatory proteins, lacI family L3i22_027160 PF00296 Luciferase-like monooxygenase L3i22_027190 PF00480 ROK family L3i22_027200 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_027210 PF00005 ABC transporter L3i22_027220 PF09084 NMT1/THI5 like L3i22_027230 PF00884 Sulfatase L3i22_027240 PF03781 Sulfatase-modifying factor enzyme 1 L3i22_027270 PF03576 Peptidase family S58 L3i22_027280 PF00296 Luciferase-like monooxygenase L3i22_027310 PF05368 NmrA-like family L3i22_027320 PF01638 HxlR-like helix-turn-helix L3i22_027350 PF00990 Diguanylate cyclase, GGDEF domain L3i22_027350 PF17151 Periplasmic sensor domain L3i22_027360 PF02515 CoA-transferase family III L3i22_027370 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain L3i22_027370 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain L3i22_027370 PF00378 Enoyl-CoA hydratase/isomerase L3i22_027380 PF00108 Thiolase, N-terminal domain L3i22_027380 PF02803 Thiolase, C-terminal domain L3i22_027390 PF00441 Acyl-CoA dehydrogenase, C-terminal domain L3i22_027390 PF02770 Acyl-CoA dehydrogenase, middle domain L3i22_027390 PF02771 Acyl-CoA dehydrogenase, N-terminal domain L3i22_027420 PF00196 Bacterial regulatory proteins, luxR family L3i22_027420 PF00072 Response regulator receiver domain L3i22_027430 PF07730 Histidine kinase L3i22_027440 PF16177 Acetyl-coenzyme A synthetase N-terminus L3i22_027440 PF00501 AMP-binding enzyme L3i22_027440 PF13193 AMP-binding enzyme C-terminal domain L3i22_027470 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle L3i22_027480 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_027490 PF12911 N-terminal TM domain of oligopeptide transport permease C L3i22_027490 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_027500 PF00005 ABC transporter L3i22_027500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L3i22_027510 PF00296 Luciferase-like monooxygenase L3i22_027520 PF00296 Luciferase-like monooxygenase L3i22_027530 PF00296 Luciferase-like monooxygenase L3i22_027550 PF00005 ABC transporter L3i22_027570 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_027580 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_027590 PF00005 ABC transporter L3i22_027600 PF00497 Bacterial extracellular solute-binding proteins, family 3 L3i22_027670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L3i22_027670 PF03466 LysR substrate binding domain L3i22_027680 PF00248 Aldo/keto reductase family L3i22_027690 PF06441 Epoxide hydrolase N terminus L3i22_027700 PF00440 Bacterial regulatory proteins, tetR family L3i22_027710 PF04072 Leucine carboxyl methyltransferase L3i22_027720 PF00563 EAL domain L3i22_027720 PF00990 Diguanylate cyclase, GGDEF domain L3i22_027720 PF03707 Bacterial signalling protein N terminal repeat L3i22_027730 PF00128 Alpha amylase, catalytic domain L3i22_027740 PF00356 Bacterial regulatory proteins, lacI family L3i22_027760 PF05532 CsbD-like L3i22_027770 PF00174 Oxidoreductase molybdopterin binding domain L3i22_027780 PF00296 Luciferase-like monooxygenase L3i22_027790 PF03176 MMPL family L3i22_027820 PF12802 MarR family L3i22_027830 PF00664 ABC transporter transmembrane region L3i22_027830 PF00005 ABC transporter L3i22_027840 PF01209 ubiE/COQ5 methyltransferase family L3i22_027850 PF00285 Citrate synthase, C-terminal domain L3i22_027860 PF00285 Citrate synthase, C-terminal domain L3i22_027890 PF12697 Alpha/beta hydrolase family L3i22_027900 PF00106 short chain dehydrogenase L3i22_027910 PF00743 Flavin-binding monooxygenase-like L3i22_027990 PF18267 Rubredoxin NAD+ reductase C-terminal domain L3i22_027990 PF07992 Pyridine nucleotide-disulphide oxidoreductase L3i22_027990 PF04324 BFD-like [2Fe-2S] binding domain L3i22_027990 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain L3i22_027990 PF01077 Nitrite and sulphite reductase 4Fe-4S domain L3i22_028010 PF07690 Major Facilitator Superfamily L3i22_028040 PF13732 Domain of unknown function (DUF4162) L3i22_028040 PF00005 ABC transporter L3i22_028080 PF00005 ABC transporter L3i22_028090 PF12704 MacB-like periplasmic core domain L3i22_028090 PF02687 FtsX-like permease family L3i22_028090 PF00005 ABC transporter L3i22_028100 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_028110 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_028120 PF01547 Bacterial extracellular solute-binding protein L3i22_028130 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain L3i22_028130 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain L3i22_028130 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain L3i22_028150 PF00942 Cellulose binding domain L3i22_028150 PF03442 Carbohydrate binding domain X2 L3i22_028160 PF00553 Cellulose binding domain L3i22_028160 PF00041 Fibronectin type III domain L3i22_028160 PF02011 Glycosyl hydrolase family 48 L3i22_028170 PF00553 Cellulose binding domain L3i22_028170 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading L3i22_028190 PF01300 Telomere recombination L3i22_028200 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase L3i22_028200 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase L3i22_028210 PF00171 Aldehyde dehydrogenase family L3i22_028240 PF00392 Bacterial regulatory proteins, gntR family L3i22_028250 PF00005 ABC transporter L3i22_028270 PF13407 Periplasmic binding protein domain L3i22_028290 PF01668 SmpB protein L3i22_028310 PF03176 MMPL family L3i22_028320 PF08240 Alcohol dehydrogenase GroES-like domain L3i22_028320 PF00107 Zinc-binding dehydrogenase L3i22_028340 PF01883 Iron-sulfur cluster assembly protein L3i22_028340 PF10609 NUBPL iron-transfer P-loop NTPase L3i22_028350 PF01614 Bacterial transcriptional regulator L3i22_028350 PF09339 IclR helix-turn-helix domain L3i22_028370 PF00553 Cellulose binding domain L3i22_028370 PF00150 Cellulase (glycosyl hydrolase family 5) L3i22_028390 PF02754 Cysteine-rich domain L3i22_028390 PF13183 4Fe-4S dicluster domain L3i22_028400 PF01565 FAD binding domain L3i22_028400 PF02913 FAD linked oxidases, C-terminal domain L3i22_028410 PF01565 FAD binding domain L3i22_028410 PF02913 FAD linked oxidases, C-terminal domain L3i22_028430 PF02896 PEP-utilising enzyme, TIM barrel domain L3i22_028430 PF00391 PEP-utilising enzyme, mobile domain L3i22_028430 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain L3i22_028440 PF06983 3-demethylubiquinone-9 3-methyltransferase L3i22_028460 PF16124 RecQ zinc-binding L3i22_028460 PF00570 HRDC domain L3i22_028460 PF00271 Helicase conserved C-terminal domain L3i22_028460 PF00270 DEAD/DEAH box helicase L3i22_028460 PF09382 RQC domain L3i22_028470 PF13581 Histidine kinase-like ATPase domain L3i22_028470 PF08448 PAS fold L3i22_028470 PF07228 Stage II sporulation protein E (SpoIIE) L3i22_028470 PF13466 STAS domain L3i22_028480 PF00925 GTP cyclohydrolase II L3i22_028520 PF13439 Glycosyltransferase Family 4 L3i22_028520 PF00534 Glycosyl transferases group 1 L3i22_028560 PF01497 Periplasmic binding protein L3i22_028580 PF00561 alpha/beta hydrolase fold L3i22_028620 PF00860 Permease family L3i22_028630 PF00183 Hsp90 protein L3i22_028630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_028670 PF07690 Major Facilitator Superfamily L3i22_028680 PF17754 MftR C-terminal domain L3i22_028680 PF00440 Bacterial regulatory proteins, tetR family L3i22_028730 PF00072 Response regulator receiver domain L3i22_028730 PF00196 Bacterial regulatory proteins, luxR family L3i22_028740 PF02525 Flavodoxin-like fold L3i22_028760 PF02447 GntP family permease L3i22_028780 PF00296 Luciferase-like monooxygenase L3i22_028830 PF07690 Major Facilitator Superfamily L3i22_028840 PF00809 Pterin binding enzyme L3i22_028860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L3i22_028870 PF00583 Acetyltransferase (GNAT) family L3i22_028890 PF00664 ABC transporter transmembrane region L3i22_028890 PF00005 ABC transporter L3i22_028900 PF02322 Cytochrome bd terminal oxidase subunit II L3i22_028910 PF01654 Cytochrome bd terminal oxidase subunit I L3i22_028920 PF03965 Penicillinase repressor L3i22_028930 PF01435 Peptidase family M48 L3i22_028940 PF00877 NlpC/P60 family L3i22_028950 PF12802 MarR family L3i22_028960 PF06441 Epoxide hydrolase N terminus L3i22_028970 PF06480 FtsH Extracellular L3i22_028970 PF01434 Peptidase family M41 L3i22_028970 PF00004 ATPase family associated with various cellular activities (AAA) L3i22_028970 PF17862 AAA+ lid domain L3i22_029010 PF01494 FAD binding domain L3i22_029020 PF00440 Bacterial regulatory proteins, tetR family L3i22_029030 PF00392 Bacterial regulatory proteins, gntR family L3i22_029030 PF07702 UTRA domain L3i22_029040 PF00290 Tryptophan synthase alpha chain L3i22_029050 PF00291 Pyridoxal-phosphate dependent enzyme L3i22_029080 PF00486 Transcriptional regulatory protein, C terminal L3i22_029080 PF00072 Response regulator receiver domain L3i22_029090 PF00512 His Kinase A (phospho-acceptor) domain L3i22_029090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_029090 PF00672 HAMP domain L3i22_029150 PF13407 Periplasmic binding protein domain L3i22_029160 PF02653 Branched-chain amino acid transport system / permease component L3i22_029170 PF00005 ABC transporter L3i22_029180 PF00232 Glycosyl hydrolase family 1 L3i22_029240 PF00990 Diguanylate cyclase, GGDEF domain L3i22_029240 PF08448 PAS fold L3i22_029280 PF16736 Single Cache-like L3i22_029280 PF00512 His Kinase A (phospho-acceptor) domain L3i22_029280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_029280 PF00989 PAS fold L3i22_029290 PF00005 ABC transporter L3i22_029290 PF00664 ABC transporter transmembrane region L3i22_029300 PF00664 ABC transporter transmembrane region L3i22_029300 PF00005 ABC transporter L3i22_029310 PF02322 Cytochrome bd terminal oxidase subunit II L3i22_029320 PF01654 Cytochrome bd terminal oxidase subunit I L3i22_029340 PF01799 [2Fe-2S] binding domain L3i22_029340 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain L3i22_029340 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase L3i22_029350 PF02652 L-lactate permease L3i22_029360 PF01979 Amidohydrolase family L3i22_029380 PF12833 Helix-turn-helix domain L3i22_029450 PF00005 ABC transporter L3i22_029470 PF00072 Response regulator receiver domain L3i22_029470 PF00196 Bacterial regulatory proteins, luxR family L3i22_029510 PF11606 Family 31 carbohydrate binding protein L3i22_029520 PF00440 Bacterial regulatory proteins, tetR family L3i22_029530 PF00106 short chain dehydrogenase L3i22_029580 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase L3i22_029580 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase L3i22_029590 PF00342 Phosphoglucose isomerase L3i22_029610 PF00041 Fibronectin type III domain L3i22_029610 PF00704 Glycosyl hydrolases family 18 L3i22_029660 PF00069 Protein kinase domain L3i22_029690 PF00296 Luciferase-like monooxygenase L3i22_029700 PF03358 NADPH-dependent FMN reductase L3i22_029740 PF00440 Bacterial regulatory proteins, tetR family L3i22_029740 PF08359 YsiA-like protein, C-terminal region L3i22_029760 PF00893 Small Multidrug Resistance protein L3i22_029770 PF01212 Beta-eliminating lyase L3i22_029800 PF00356 Bacterial regulatory proteins, lacI family L3i22_029850 PF13472 GDSL-like Lipase/Acylhydrolase family L3i22_029870 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_029880 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_029880 PF12911 N-terminal TM domain of oligopeptide transport permease C L3i22_029890 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L3i22_029890 PF00005 ABC transporter L3i22_029900 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L3i22_029900 PF00005 ABC transporter L3i22_029920 PF00561 alpha/beta hydrolase fold L3i22_029940 PF07859 alpha/beta hydrolase fold L3i22_029960 PF03450 CO dehydrogenase flavoprotein C-terminal domain L3i22_029960 PF00941 FAD binding domain in molybdopterin dehydrogenase L3i22_029970 PF00480 ROK family L3i22_029980 PF16875 Glycosyl hydrolase family 36 N-terminal domain L3i22_029980 PF16874 Glycosyl hydrolase family 36 C-terminal domain L3i22_030040 PF00300 Histidine phosphatase superfamily (branch 1) L3i22_030050 PF00356 Bacterial regulatory proteins, lacI family L3i22_030070 PF00072 Response regulator receiver domain L3i22_030070 PF00196 Bacterial regulatory proteins, luxR family L3i22_030130 PF00486 Transcriptional regulatory protein, C terminal L3i22_030130 PF00072 Response regulator receiver domain L3i22_030140 PF00672 HAMP domain L3i22_030140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_030140 PF00512 His Kinase A (phospho-acceptor) domain L3i22_030150 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion L3i22_030160 PF00005 ABC transporter L3i22_030170 PF00005 ABC transporter L3i22_030170 PF12704 MacB-like periplasmic core domain L3i22_030170 PF02687 FtsX-like permease family L3i22_030190 PF00196 Bacterial regulatory proteins, luxR family L3i22_030190 PF00072 Response regulator receiver domain L3i22_030220 PF03741 Integral membrane protein TerC family L3i22_030230 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase L3i22_030280 PF04962 KduI/IolB family L3i22_030290 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain L3i22_030290 PF00205 Thiamine pyrophosphate enzyme, central domain L3i22_030290 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain L3i22_030300 PF01261 Xylose isomerase-like TIM barrel L3i22_030320 PF02653 Branched-chain amino acid transport system / permease component L3i22_030330 PF00005 ABC transporter L3i22_030340 PF02894 Oxidoreductase family, C-terminal alpha/beta domain L3i22_030340 PF01408 Oxidoreductase family, NAD-binding Rossmann fold L3i22_030370 PF05138 Phenylacetic acid catabolic protein L3i22_030380 PF06243 Phenylacetic acid degradation B L3i22_030390 PF05138 Phenylacetic acid catabolic protein L3i22_030400 PF01883 Iron-sulfur cluster assembly protein L3i22_030410 PF00111 2Fe-2S iron-sulfur cluster binding domain L3i22_030410 PF00970 Oxidoreductase FAD-binding domain L3i22_030410 PF00175 Oxidoreductase NAD-binding domain L3i22_030420 PF08241 Methyltransferase domain L3i22_030450 PF00155 Aminotransferase class I and II L3i22_030450 PF00392 Bacterial regulatory proteins, gntR family L3i22_030470 PF13180 PDZ domain L3i22_030480 PF01494 FAD binding domain L3i22_030510 PF00005 ABC transporter L3i22_030510 PF00664 ABC transporter transmembrane region L3i22_030520 PF00149 Calcineurin-like phosphoesterase L3i22_030580 PF00069 Protein kinase domain L3i22_030600 PF13520 Amino acid permease L3i22_030610 PF01740 STAS domain L3i22_030630 PF00067 Cytochrome P450 L3i22_030640 PF02018 Carbohydrate binding domain L3i22_030640 PF02927 Cellulase N-terminal ig-like domain L3i22_030640 PF00759 Glycosyl hydrolase family 9 L3i22_030650 PF07478 D-ala D-ala ligase C-terminus L3i22_030650 PF01820 D-ala D-ala ligase N-terminus L3i22_030680 PF00512 His Kinase A (phospho-acceptor) domain L3i22_030680 PF01590 GAF domain L3i22_030680 PF08446 PAS fold L3i22_030680 PF00360 Phytochrome region L3i22_030680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_030720 PF00107 Zinc-binding dehydrogenase L3i22_030720 PF08240 Alcohol dehydrogenase GroES-like domain L3i22_030730 PF03707 Bacterial signalling protein N terminal repeat L3i22_030730 PF13188 PAS domain L3i22_030730 PF00990 Diguanylate cyclase, GGDEF domain L3i22_030730 PF00563 EAL domain L3i22_030740 PF12419 SNF2 Helicase protein L3i22_030740 PF00271 Helicase conserved C-terminal domain L3i22_030740 PF00176 SNF2 family N-terminal domain L3i22_030750 PF04434 SWIM zinc finger L3i22_030770 PF00106 short chain dehydrogenase L3i22_030780 PF03176 MMPL family L3i22_030800 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase L3i22_030810 PF03883 Peroxide stress protein YaaA L3i22_030820 PF00296 Luciferase-like monooxygenase L3i22_030860 PF01381 Helix-turn-helix L3i22_030890 PF04234 CopC domain L3i22_030900 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I L3i22_030900 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II L3i22_030900 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain L3i22_030900 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III L3i22_030910 PF00990 Diguanylate cyclase, GGDEF domain L3i22_030910 PF03707 Bacterial signalling protein N terminal repeat L3i22_030910 PF00563 EAL domain L3i22_030940 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain L3i22_030940 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase L3i22_030960 PF13466 STAS domain L3i22_030960 PF08448 PAS fold L3i22_030960 PF07228 Stage II sporulation protein E (SpoIIE) L3i22_030960 PF13581 Histidine kinase-like ATPase domain L3i22_030980 PF00497 Bacterial extracellular solute-binding proteins, family 3 L3i22_031000 PF00293 NUDIX domain L3i22_031010 PF00196 Bacterial regulatory proteins, luxR family L3i22_031030 PF00005 ABC transporter L3i22_031030 PF13732 Domain of unknown function (DUF4162) L3i22_031060 PF00128 Alpha amylase, catalytic domain L3i22_031060 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) L3i22_031070 PF07690 Major Facilitator Superfamily L3i22_031100 PF05139 Erythromycin esterase L3i22_031100 PF00156 Phosphoribosyl transferase domain L3i22_031110 PF01152 Bacterial-like globin L3i22_031150 PF13411 MerR HTH family regulatory protein L3i22_031160 PF01904 Protein of unknown function DUF72 L3i22_031180 PF00251 Glycosyl hydrolases family 32 N-terminal domain L3i22_031180 PF08244 Glycosyl hydrolases family 32 C terminal L3i22_031200 PF00005 ABC transporter L3i22_031200 PF02687 FtsX-like permease family L3i22_031200 PF12704 MacB-like periplasmic core domain L3i22_031220 PF13419 Haloacid dehalogenase-like hydrolase L3i22_031250 PF04542 Sigma-70 region 2 L3i22_031250 PF12680 SnoaL-like domain L3i22_031250 PF08281 Sigma-70, region 4 L3i22_031280 PF16655 PhoD-like phosphatase, N-terminal domain L3i22_031280 PF09423 PhoD-like phosphatase L3i22_031350 PF00722 Glycosyl hydrolases family 16 L3i22_031360 PF12464 Maltose acetyltransferase L3i22_031360 PF14602 Hexapeptide repeat of succinyl-transferase L3i22_031370 PF00440 Bacterial regulatory proteins, tetR family L3i22_031380 PF03932 CutC family L3i22_031420 PF00990 Diguanylate cyclase, GGDEF domain L3i22_031420 PF17158 Membrane-associated sensor, integral membrane domain L3i22_031430 PF02771 Acyl-CoA dehydrogenase, N-terminal domain L3i22_031430 PF08028 Acyl-CoA dehydrogenase, C-terminal domain L3i22_031450 PF00990 Diguanylate cyclase, GGDEF domain L3i22_031450 PF00563 EAL domain L3i22_031450 PF03707 Bacterial signalling protein N terminal repeat L3i22_031470 PF04185 Phosphoesterase family L3i22_031480 PF07690 Major Facilitator Superfamily L3i22_031540 PF01367 5'-3' exonuclease, C-terminal SAM fold L3i22_031540 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain L3i22_031580 PF12894 Anaphase-promoting complex subunit 4 WD40 domain L3i22_031580 PF00400 WD domain, G-beta repeat L3i22_031600 PF00248 Aldo/keto reductase family L3i22_031620 PF00005 ABC transporter L3i22_031630 PF07730 Histidine kinase L3i22_031640 PF00072 Response regulator receiver domain L3i22_031640 PF00196 Bacterial regulatory proteins, luxR family L3i22_031660 PF02771 Acyl-CoA dehydrogenase, N-terminal domain L3i22_031660 PF02770 Acyl-CoA dehydrogenase, middle domain L3i22_031660 PF00441 Acyl-CoA dehydrogenase, C-terminal domain L3i22_031670 PF01037 Lrp/AsnC ligand binding domain L3i22_031700 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase L3i22_031720 PF08240 Alcohol dehydrogenase GroES-like domain L3i22_031720 PF00107 Zinc-binding dehydrogenase L3i22_031770 PF08241 Methyltransferase domain L3i22_031810 PF01979 Amidohydrolase family L3i22_031820 PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit L3i22_031830 PF02310 B12 binding domain L3i22_031830 PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase L3i22_031840 PF03061 Thioesterase superfamily L3i22_031850 PF13941 MutL protein L3i22_031860 PF00795 Carbon-nitrogen hydrolase L3i22_031860 PF00535 Glycosyl transferase family 2 L3i22_031870 PF00535 Glycosyl transferase family 2 L3i22_031890 PF13397 RNA polymerase-binding protein L3i22_032040 PF00296 Luciferase-like monooxygenase L3i22_032050 PF02203 Tar ligand binding domain homologue L3i22_032050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L3i22_032050 PF00672 HAMP domain L3i22_032080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L3i22_032080 PF03466 LysR substrate binding domain L3i22_032090 PF00296 Luciferase-like monooxygenase L3i22_032100 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle L3i22_032110 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_032120 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_032120 PF12911 N-terminal TM domain of oligopeptide transport permease C L3i22_032130 PF00005 ABC transporter L3i22_032130 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L3i22_032140 PF00005 ABC transporter L3i22_032140 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L3i22_032150 PF00296 Luciferase-like monooxygenase L3i22_032160 PF00296 Luciferase-like monooxygenase L3i22_032170 PF00107 Zinc-binding dehydrogenase L3i22_032170 PF08240 Alcohol dehydrogenase GroES-like domain L3i22_032180 PF01047 MarR family L3i22_032180 PF00480 ROK family L3i22_032190 PF00005 ABC transporter L3i22_032200 PF02653 Branched-chain amino acid transport system / permease component L3i22_032210 PF13407 Periplasmic binding protein domain L3i22_032230 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase L3i22_032230 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain L3i22_032240 PF03450 CO dehydrogenase flavoprotein C-terminal domain L3i22_032240 PF00941 FAD binding domain in molybdopterin dehydrogenase L3i22_032250 PF00111 2Fe-2S iron-sulfur cluster binding domain L3i22_032250 PF01799 [2Fe-2S] binding domain L3i22_032250 PF10518 TAT (twin-arginine translocation) pathway signal sequence L3i22_032290 PF06736 Protein of unknown function (DUF1211) L3i22_032340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_032340 PF00512 His Kinase A (phospho-acceptor) domain L3i22_032340 PF08448 PAS fold L3i22_032340 PF13188 PAS domain L3i22_032340 PF00072 Response regulator receiver domain L3i22_032360 PF13426 PAS domain L3i22_032360 PF00072 Response regulator receiver domain L3i22_032360 PF08448 PAS fold L3i22_032360 PF00512 His Kinase A (phospho-acceptor) domain L3i22_032360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_032430 PF08361 MAATS-type transcriptional repressor, C-terminal region L3i22_032430 PF00440 Bacterial regulatory proteins, tetR family L3i22_032440 PF01323 DSBA-like thioredoxin domain L3i22_032470 PF13411 MerR HTH family regulatory protein L3i22_032510 PF07690 Major Facilitator Superfamily L3i22_032520 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain L3i22_032520 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain L3i22_032530 PF00150 Cellulase (glycosyl hydrolase family 5) L3i22_032530 PF00553 Cellulose binding domain L3i22_032540 PF03707 Bacterial signalling protein N terminal repeat L3i22_032540 PF00990 Diguanylate cyclase, GGDEF domain L3i22_032540 PF00563 EAL domain L3i22_032550 PF13458 Periplasmic binding protein L3i22_032560 PF00905 Penicillin binding protein transpeptidase domain L3i22_032560 PF00912 Transglycosylase L3i22_032580 PF09335 SNARE associated Golgi protein L3i22_032600 PF07690 Major Facilitator Superfamily L3i22_032630 PF00296 Luciferase-like monooxygenase L3i22_032680 PF01055 Glycosyl hydrolases family 31 L3i22_032740 PF00501 AMP-binding enzyme L3i22_032740 PF13193 AMP-binding enzyme C-terminal domain L3i22_032770 PF00890 FAD binding domain L3i22_032780 PF00440 Bacterial regulatory proteins, tetR family L3i22_032790 PF06165 Glycosyltransferase family 36 L3i22_032790 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain L3i22_033010 PF14031 Putative serine dehydratase domain L3i22_033020 PF00005 ABC transporter L3i22_033040 PF04444 Catechol dioxygenase N terminus L3i22_033040 PF00775 Dioxygenase L3i22_033050 PF00465 Iron-containing alcohol dehydrogenase L3i22_033060 PF01494 FAD binding domain L3i22_033080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L3i22_033080 PF03466 LysR substrate binding domain L3i22_033090 PF02803 Thiolase, C-terminal domain L3i22_033090 PF00108 Thiolase, N-terminal domain L3i22_033100 PF01144 Coenzyme A transferase L3i22_033110 PF01144 Coenzyme A transferase L3i22_033180 PF02653 Branched-chain amino acid transport system / permease component L3i22_033190 PF00005 ABC transporter L3i22_033200 PF00005 ABC transporter L3i22_033200 PF12399 Branched-chain amino acid ATP-binding cassette transporter L3i22_033230 PF00561 alpha/beta hydrolase fold L3i22_033250 PF00356 Bacterial regulatory proteins, lacI family L3i22_033280 PF03976 Polyphosphate kinase 2 (PPK2) L3i22_033290 PF07532 Bacterial Ig-like domain (group 4) L3i22_033300 PF03422 Carbohydrate binding module (family 6) L3i22_033300 PF04616 Glycosyl hydrolases family 43 L3i22_033390 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain L3i22_033390 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain L3i22_033390 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain L3i22_033390 PF08531 Alpha-L-rhamnosidase N-terminal domain L3i22_033400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_033400 PF07730 Histidine kinase L3i22_033410 PF00990 Diguanylate cyclase, GGDEF domain L3i22_033410 PF03707 Bacterial signalling protein N terminal repeat L3i22_033410 PF00563 EAL domain L3i22_033410 PF13188 PAS domain L3i22_033420 PF00990 Diguanylate cyclase, GGDEF domain L3i22_033430 PF06441 Epoxide hydrolase N terminus L3i22_033440 PF01979 Amidohydrolase family L3i22_033450 PF03824 High-affinity nickel-transport protein L3i22_033480 PF00196 Bacterial regulatory proteins, luxR family L3i22_033500 PF03773 Predicted permease L3i22_033530 PF01047 MarR family L3i22_033540 PF00724 NADH:flavin oxidoreductase / NADH oxidase family L3i22_033550 PF00183 Hsp90 protein L3i22_033580 PF01139 tRNA-splicing ligase RtcB L3i22_033600 PF00072 Response regulator receiver domain L3i22_033620 PF01740 STAS domain L3i22_033630 PF04545 Sigma-70, region 4 L3i22_033630 PF04539 Sigma-70 region 3 L3i22_033630 PF04542 Sigma-70 region 2 L3i22_033640 PF00563 EAL domain L3i22_033640 PF00990 Diguanylate cyclase, GGDEF domain L3i22_033640 PF03707 Bacterial signalling protein N terminal repeat L3i22_033680 PF06628 Catalase-related immune-responsive L3i22_033680 PF18011 C-terminal domain found in long catalases L3i22_033680 PF00199 Catalase L3i22_033690 PF00563 EAL domain L3i22_033690 PF00990 Diguanylate cyclase, GGDEF domain L3i22_033690 PF03707 Bacterial signalling protein N terminal repeat L3i22_033700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L3i22_033700 PF03466 LysR substrate binding domain L3i22_033710 PF00106 short chain dehydrogenase L3i22_033740 PF08543 Phosphomethylpyrimidine kinase L3i22_033780 PF02163 Peptidase family M50 L3i22_033780 PF17820 PDZ domain L3i22_033810 PF12704 MacB-like periplasmic core domain L3i22_033810 PF02687 FtsX-like permease family L3i22_033820 PF00005 ABC transporter L3i22_033820 PF02687 FtsX-like permease family L3i22_033820 PF12704 MacB-like periplasmic core domain L3i22_033830 PF07730 Histidine kinase L3i22_033830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_033840 PF00196 Bacterial regulatory proteins, luxR family L3i22_033840 PF00072 Response regulator receiver domain L3i22_033850 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases L3i22_033860 PF12833 Helix-turn-helix domain L3i22_033880 PF00196 Bacterial regulatory proteins, luxR family L3i22_033880 PF00072 Response regulator receiver domain L3i22_033890 PF00155 Aminotransferase class I and II L3i22_033910 PF00115 Cytochrome C and Quinol oxidase polypeptide I L3i22_033940 PF09209 Tetracyclin repressor-like, C-terminal domain L3i22_033940 PF00440 Bacterial regulatory proteins, tetR family L3i22_033950 PF07690 Major Facilitator Superfamily L3i22_033960 PF05922 Peptidase inhibitor I9 L3i22_033960 PF00082 Subtilase family L3i22_033970 PF00211 Adenylate and Guanylate cyclase catalytic domain L3i22_033970 PF13191 AAA ATPase domain L3i22_033980 PF00970 Oxidoreductase FAD-binding domain L3i22_033980 PF00042 Globin L3i22_033980 PF00175 Oxidoreductase NAD-binding domain L3i22_034000 PF07690 Major Facilitator Superfamily L3i22_034020 PF00512 His Kinase A (phospho-acceptor) domain L3i22_034020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_034020 PF00672 HAMP domain L3i22_034030 PF00486 Transcriptional regulatory protein, C terminal L3i22_034030 PF00072 Response regulator receiver domain L3i22_034040 PF00999 Sodium/hydrogen exchanger family L3i22_034060 PF01070 FMN-dependent dehydrogenase L3i22_034080 PF04978 Protein of unknown function (DUF664) L3i22_034090 PF01494 FAD binding domain L3i22_034110 PF01872 RibD C-terminal domain L3i22_034130 PF00221 Aromatic amino acid lyase L3i22_034150 PF13193 AMP-binding enzyme C-terminal domain L3i22_034150 PF00501 AMP-binding enzyme L3i22_034160 PF09055 Nickel-containing superoxide dismutase L3i22_034200 PF01037 Lrp/AsnC ligand binding domain L3i22_034220 PF01327 Polypeptide deformylase L3i22_034390 PF00544 Pectate lyase L3i22_034420 PF00210 Ferritin-like domain L3i22_034460 PF03704 Bacterial transcriptional activator domain L3i22_034460 PF00931 NB-ARC domain L3i22_034460 PF00486 Transcriptional regulatory protein, C terminal L3i22_034480 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain L3i22_034480 PF00205 Thiamine pyrophosphate enzyme, central domain L3i22_034480 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain L3i22_034490 PF00296 Luciferase-like monooxygenase L3i22_034520 PF00158 Sigma-54 interaction domain L3i22_034520 PF00072 Response regulator receiver domain L3i22_034520 PF02954 Bacterial regulatory protein, Fis family L3i22_034530 PF02627 Carboxymuconolactone decarboxylase family L3i22_034550 PF00196 Bacterial regulatory proteins, luxR family L3i22_034560 PF07298 NnrU protein L3i22_034620 PF00561 alpha/beta hydrolase fold L3i22_034640 PF01565 FAD binding domain L3i22_034640 PF08031 Berberine and berberine like L3i22_034650 PF00196 Bacterial regulatory proteins, luxR family L3i22_034670 PF03704 Bacterial transcriptional activator domain L3i22_034670 PF00486 Transcriptional regulatory protein, C terminal L3i22_034670 PF00931 NB-ARC domain L3i22_034680 PF00196 Bacterial regulatory proteins, luxR family L3i22_034680 PF00072 Response regulator receiver domain L3i22_034690 PF00072 Response regulator receiver domain L3i22_034690 PF00196 Bacterial regulatory proteins, luxR family L3i22_034710 PF04607 Region found in RelA / SpoT proteins L3i22_034740 PF00196 Bacterial regulatory proteins, luxR family L3i22_034760 PF00440 Bacterial regulatory proteins, tetR family L3i22_034820 PF00296 Luciferase-like monooxygenase L3i22_034830 PF01565 FAD binding domain L3i22_034830 PF08031 Berberine and berberine like L3i22_034860 PF00291 Pyridoxal-phosphate dependent enzyme L3i22_034900 PF00392 Bacterial regulatory proteins, gntR family L3i22_034900 PF00155 Aminotransferase class I and II L3i22_034930 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain L3i22_034930 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain L3i22_034940 PF07690 Major Facilitator Superfamily L3i22_034950 PF02983 Alpha-lytic protease prodomain L3i22_034960 PF04616 Glycosyl hydrolases family 43 L3i22_034960 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain L3i22_034980 PF00023 Ankyrin repeat L3i22_034980 PF12796 Ankyrin repeats (3 copies) L3i22_034990 PF03033 Glycosyltransferase family 28 N-terminal domain L3i22_035000 PF04244 Deoxyribodipyrimidine photo-lyase-related protein L3i22_035020 PF03793 PASTA domain L3i22_035020 PF00069 Protein kinase domain L3i22_035060 PF07228 Stage II sporulation protein E (SpoIIE) L3i22_035060 PF00672 HAMP domain L3i22_035070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L3i22_035090 PF00553 Cellulose binding domain L3i22_035090 PF00331 Glycosyl hydrolase family 10 L3i22_035140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_035140 PF00512 His Kinase A (phospho-acceptor) domain L3i22_035140 PF08446 PAS fold L3i22_035140 PF00360 Phytochrome region L3i22_035140 PF01590 GAF domain L3i22_035150 PF04107 Glutamate-cysteine ligase family 2(GCS2) L3i22_035160 PF01546 Peptidase family M20/M25/M40 L3i22_035160 PF07687 Peptidase dimerisation domain L3i22_035210 PF00128 Alpha amylase, catalytic domain L3i22_035220 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_035230 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_035240 PF13416 Bacterial extracellular solute-binding protein L3i22_035250 PF00356 Bacterial regulatory proteins, lacI family L3i22_035260 PF03422 Carbohydrate binding module (family 6) L3i22_035260 PF16990 Carbohydrate binding module (family 35) L3i22_035260 PF07705 CARDB L3i22_035260 PF13199 Glycosyl hydrolase family 66 L3i22_035270 PF01494 FAD binding domain L3i22_035280 PF00400 WD domain, G-beta repeat L3i22_035280 PF00069 Protein kinase domain L3i22_035290 PF00072 Response regulator receiver domain L3i22_035290 PF00990 Diguanylate cyclase, GGDEF domain L3i22_035320 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase L3i22_035340 PF02515 CoA-transferase family III L3i22_035350 PF01979 Amidohydrolase family L3i22_035360 PF01614 Bacterial transcriptional regulator L3i22_035360 PF09339 IclR helix-turn-helix domain L3i22_035380 PF00246 Zinc carboxypeptidase L3i22_035420 PF08240 Alcohol dehydrogenase GroES-like domain L3i22_035420 PF00107 Zinc-binding dehydrogenase L3i22_035430 PF00005 ABC transporter L3i22_035440 PF01032 FecCD transport family L3i22_035450 PF01032 FecCD transport family L3i22_035460 PF01497 Periplasmic binding protein L3i22_035480 PF00857 Isochorismatase family L3i22_035480 PF00550 Phosphopantetheine attachment site L3i22_035490 PF04820 Tryptophan halogenase L3i22_035500 PF03621 MbtH-like protein L3i22_035510 PF00501 AMP-binding enzyme L3i22_035510 PF13193 AMP-binding enzyme C-terminal domain L3i22_035510 PF00550 Phosphopantetheine attachment site L3i22_035510 PF00668 Condensation domain L3i22_035520 PF13193 AMP-binding enzyme C-terminal domain L3i22_035520 PF00501 AMP-binding enzyme L3i22_035520 PF00668 Condensation domain L3i22_035520 PF00550 Phosphopantetheine attachment site L3i22_035530 PF00005 ABC transporter L3i22_035530 PF00664 ABC transporter transmembrane region L3i22_035540 PF00005 ABC transporter L3i22_035540 PF00664 ABC transporter transmembrane region L3i22_035550 PF12697 Alpha/beta hydrolase family L3i22_035560 PF04954 Siderophore-interacting protein L3i22_035560 PF08021 Siderophore-interacting FAD-binding domain L3i22_035570 PF00999 Sodium/hydrogen exchanger family L3i22_035580 PF00425 chorismate binding enzyme L3i22_035590 PF00501 AMP-binding enzyme L3i22_035590 PF13193 AMP-binding enzyme C-terminal domain L3i22_035600 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) L3i22_035610 PF07676 WD40-like Beta Propeller Repeat L3i22_035620 PF04226 Transglycosylase associated protein L3i22_035640 PF00107 Zinc-binding dehydrogenase L3i22_035640 PF08240 Alcohol dehydrogenase GroES-like domain L3i22_035650 PF00378 Enoyl-CoA hydratase/isomerase L3i22_035690 PF04075 F420H(2)-dependent quinone reductase L3i22_035770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L3i22_035770 PF03466 LysR substrate binding domain L3i22_035780 PF00459 Inositol monophosphatase family L3i22_035800 PF01083 Cutinase L3i22_035840 PF00106 short chain dehydrogenase L3i22_035870 PF00196 Bacterial regulatory proteins, luxR family L3i22_035870 PF00072 Response regulator receiver domain L3i22_035920 PF00356 Bacterial regulatory proteins, lacI family L3i22_035930 PF13416 Bacterial extracellular solute-binding protein L3i22_035940 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_035950 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_035960 PF07944 Beta-L-arabinofuranosidase, GH127 L3i22_035980 PF07532 Bacterial Ig-like domain (group 4) L3i22_036040 PF00743 Flavin-binding monooxygenase-like L3i22_036080 PF00392 Bacterial regulatory proteins, gntR family L3i22_036080 PF00155 Aminotransferase class I and II L3i22_036110 PF00155 Aminotransferase class I and II L3i22_036120 PF06964 Alpha-L-arabinofuranosidase C-terminal domain L3i22_036160 PF01380 SIS domain L3i22_036170 PF01380 SIS domain L3i22_036170 PF01418 Helix-turn-helix domain, rpiR family L3i22_036190 PF07075 Protein of unknown function (DUF1343) L3i22_036200 PF00933 Glycosyl hydrolase family 3 N terminal domain L3i22_036200 PF01915 Glycosyl hydrolase family 3 C-terminal domain L3i22_036210 PF00144 Beta-lactamase L3i22_036220 PF01547 Bacterial extracellular solute-binding protein L3i22_036230 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_036240 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_036270 PF07730 Histidine kinase L3i22_036280 PF00072 Response regulator receiver domain L3i22_036280 PF00196 Bacterial regulatory proteins, luxR family L3i22_036300 PF00107 Zinc-binding dehydrogenase L3i22_036300 PF08240 Alcohol dehydrogenase GroES-like domain L3i22_036350 PF07690 Major Facilitator Superfamily L3i22_036360 PF07729 FCD domain L3i22_036360 PF00392 Bacterial regulatory proteins, gntR family L3i22_036370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_036370 PF00512 His Kinase A (phospho-acceptor) domain L3i22_036370 PF00672 HAMP domain L3i22_036380 PF00486 Transcriptional regulatory protein, C terminal L3i22_036380 PF00072 Response regulator receiver domain L3i22_036430 PF00196 Bacterial regulatory proteins, luxR family L3i22_036430 PF00072 Response regulator receiver domain L3i22_036440 PF02687 FtsX-like permease family L3i22_036440 PF12704 MacB-like periplasmic core domain L3i22_036440 PF00005 ABC transporter L3i22_036470 PF13193 AMP-binding enzyme C-terminal domain L3i22_036470 PF00501 AMP-binding enzyme L3i22_036510 PF01297 Zinc-uptake complex component A periplasmic L3i22_036520 PF00005 ABC transporter L3i22_036530 PF00950 ABC 3 transport family L3i22_036610 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase L3i22_036610 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase L3i22_036670 PF04542 Sigma-70 region 2 L3i22_036670 PF08281 Sigma-70, region 4 L3i22_036680 PF03795 YCII-related domain L3i22_036700 PF03458 UPF0126 domain L3i22_036730 PF00563 EAL domain L3i22_036730 PF13426 PAS domain L3i22_036730 PF00990 Diguanylate cyclase, GGDEF domain L3i22_036790 PF12146 Serine aminopeptidase, S33 L3i22_036900 PF04055 Radical SAM superfamily L3i22_037020 PF07690 Major Facilitator Superfamily L3i22_037030 PF00440 Bacterial regulatory proteins, tetR family L3i22_037140 PF03358 NADPH-dependent FMN reductase L3i22_037160 PF04199 Putative cyclase L3i22_037170 PF00248 Aldo/keto reductase family L3i22_037200 PF08719 Domain of unknown function (DUF1768) L3i22_037240 PF13411 MerR HTH family regulatory protein L3i22_037260 PF13460 NAD(P)H-binding L3i22_037270 PF08240 Alcohol dehydrogenase GroES-like domain L3i22_037270 PF00107 Zinc-binding dehydrogenase L3i22_037300 PF02909 Tetracyclin repressor-like, C-terminal domain L3i22_037300 PF00440 Bacterial regulatory proteins, tetR family L3i22_037310 PF00753 Metallo-beta-lactamase superfamily L3i22_037320 PF00486 Transcriptional regulatory protein, C terminal L3i22_037320 PF00931 NB-ARC domain L3i22_037320 PF03704 Bacterial transcriptional activator domain L3i22_037330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily L3i22_037440 PF01425 Amidase L3i22_037460 PF01027 Inhibitor of apoptosis-promoting Bax1 L3i22_037470 PF00561 alpha/beta hydrolase fold L3i22_037480 PF00723 Glycosyl hydrolases family 15 L3i22_037520 PF04542 Sigma-70 region 2 L3i22_037520 PF08281 Sigma-70, region 4 L3i22_037540 PF00486 Transcriptional regulatory protein, C terminal L3i22_037540 PF00072 Response regulator receiver domain L3i22_037550 PF00672 HAMP domain L3i22_037550 PF00512 His Kinase A (phospho-acceptor) domain L3i22_037550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_037560 PF03734 L,D-transpeptidase catalytic domain L3i22_037560 PF17964 Bacterial Ig domain L3i22_037580 PF02423 Ornithine cyclodeaminase/mu-crystallin family L3i22_037590 PF02653 Branched-chain amino acid transport system / permease component L3i22_037600 PF02653 Branched-chain amino acid transport system / permease component L3i22_037610 PF00005 ABC transporter L3i22_037630 PF00392 Bacterial regulatory proteins, gntR family L3i22_037630 PF07729 FCD domain L3i22_037680 PF06965 Na+/H+ antiporter 1 L3i22_037690 PF00931 NB-ARC domain L3i22_037690 PF03704 Bacterial transcriptional activator domain L3i22_037690 PF00486 Transcriptional regulatory protein, C terminal L3i22_037710 PF13732 Domain of unknown function (DUF4162) L3i22_037710 PF00005 ABC transporter L3i22_037780 PF12911 N-terminal TM domain of oligopeptide transport permease C L3i22_037780 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_037820 PF00400 WD domain, G-beta repeat L3i22_037820 PF08937 MTH538 TIR-like domain (DUF1863) L3i22_037840 PF03704 Bacterial transcriptional activator domain L3i22_037840 PF00486 Transcriptional regulatory protein, C terminal L3i22_038020 PF07724 AAA domain (Cdc48 subfamily) L3i22_038020 PF10431 C-terminal, D2-small domain, of ClpB protein L3i22_038020 PF06689 ClpX C4-type zinc finger L3i22_038050 PF00196 Bacterial regulatory proteins, luxR family L3i22_038050 PF00072 Response regulator receiver domain L3i22_038070 PF03176 MMPL family L3i22_038160 PF03171 2OG-Fe(II) oxygenase superfamily L3i22_038160 PF14226 non-haem dioxygenase in morphine synthesis N-terminal L3i22_038210 PF01527 Transposase L3i22_038230 PF00753 Metallo-beta-lactamase superfamily L3i22_038260 PF03466 LysR substrate binding domain L3i22_038260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L3i22_038280 PF01022 Bacterial regulatory protein, arsR family L3i22_038290 PF00107 Zinc-binding dehydrogenase L3i22_038310 PF01653 NAD-dependent DNA ligase adenylation domain L3i22_038310 PF12826 Helix-hairpin-helix motif L3i22_038310 PF03120 NAD-dependent DNA ligase OB-fold domain L3i22_038310 PF00533 BRCA1 C Terminus (BRCT) domain L3i22_038370 PF16859 Tetracyclin repressor-like, C-terminal domain L3i22_038370 PF00440 Bacterial regulatory proteins, tetR family L3i22_038470 PF16363 GDP-mannose 4,6 dehydratase L3i22_038480 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain L3i22_038480 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain L3i22_038480 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain L3i22_038510 PF00483 Nucleotidyl transferase L3i22_038530 PF13439 Glycosyltransferase Family 4 L3i22_038610 PF00005 ABC transporter L3i22_038620 PF00672 HAMP domain L3i22_038620 PF07730 Histidine kinase L3i22_038620 PF16448 LapD/MoxY periplasmic domain L3i22_038630 PF00196 Bacterial regulatory proteins, luxR family L3i22_038630 PF00072 Response regulator receiver domain L3i22_038720 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD L3i22_038750 PF13519 von Willebrand factor type A domain L3i22_038750 PF17863 AAA lid domain L3i22_038750 PF07728 AAA domain (dynein-related subfamily) L3i22_038760 PF13519 von Willebrand factor type A domain L3i22_038760 PF01078 Magnesium chelatase, subunit ChlI L3i22_038760 PF17863 AAA lid domain L3i22_038880 PF00440 Bacterial regulatory proteins, tetR family L3i22_038890 PF07859 alpha/beta hydrolase fold L3i22_038970 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III L3i22_038970 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal L3i22_039000 PF00892 EamA-like transporter family L3i22_039010 PF03466 LysR substrate binding domain L3i22_039010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L3i22_039080 PF00672 HAMP domain L3i22_039080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L3i22_039090 PF16197 Ketoacyl-synthetase C-terminal extension L3i22_039090 PF14765 Polyketide synthase dehydratase L3i22_039090 PF00109 Beta-ketoacyl synthase, N-terminal domain L3i22_039090 PF00698 Acyl transferase domain L3i22_039090 PF08240 Alcohol dehydrogenase GroES-like domain L3i22_039090 PF00107 Zinc-binding dehydrogenase L3i22_039090 PF00550 Phosphopantetheine attachment site L3i22_039090 PF02801 Beta-ketoacyl synthase, C-terminal domain L3i22_039090 PF08659 KR domain L3i22_039100 PF04055 Radical SAM superfamily L3i22_039130 PF18665 Tetracyclin repressor-like, C-terminal domain L3i22_039130 PF00440 Bacterial regulatory proteins, tetR family L3i22_039160 PF00561 alpha/beta hydrolase fold L3i22_039240 PF07519 Tannase and feruloyl esterase L3i22_039260 PF00698 Acyl transferase domain L3i22_039260 PF16197 Ketoacyl-synthetase C-terminal extension L3i22_039260 PF00109 Beta-ketoacyl synthase, N-terminal domain L3i22_039260 PF02801 Beta-ketoacyl synthase, C-terminal domain L3i22_039260 PF00550 Phosphopantetheine attachment site L3i22_039260 PF14765 Polyketide synthase dehydratase L3i22_039260 PF08990 Erythronolide synthase docking L3i22_039260 PF08659 KR domain L3i22_039260 PF08240 Alcohol dehydrogenase GroES-like domain L3i22_039270 PF06722 Protein of unknown function (DUF1205) L3i22_039280 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family L3i22_039290 PF00440 Bacterial regulatory proteins, tetR family L3i22_039290 PF17926 Tetracyclin repressor-like, C-terminal domain L3i22_039310 PF00248 Aldo/keto reductase family L3i22_039320 PF00501 AMP-binding enzyme L3i22_039320 PF13193 AMP-binding enzyme C-terminal domain L3i22_039370 PF00196 Bacterial regulatory proteins, luxR family L3i22_039370 PF00072 Response regulator receiver domain L3i22_039380 PF00072 Response regulator receiver domain L3i22_039380 PF00196 Bacterial regulatory proteins, luxR family L3i22_039390 PF18146 Damage-inducible protein CinA KH domain L3i22_039390 PF00994 Probable molybdopterin binding domain L3i22_039390 PF02464 Competence-damaged protein L3i22_039570 PF13649 Methyltransferase domain L3i22_039620 PF00144 Beta-lactamase L3i22_039660 PF06772 Bacterial low temperature requirement A protein (LtrA) L3i22_039700 PF00248 Aldo/keto reductase family L3i22_039720 PF00248 Aldo/keto reductase family L3i22_039750 PF00171 Aldehyde dehydrogenase family L3i22_039760 PF12852 Cupin L3i22_039760 PF12833 Helix-turn-helix domain L3i22_039790 PF02511 Thymidylate synthase complementing protein L3i22_039820 PF00144 Beta-lactamase L3i22_039850 PF00005 ABC transporter L3i22_039960 PF00012 Hsp70 protein L3i22_040020 PF00069 Protein kinase domain L3i22_040020 PF00400 WD domain, G-beta repeat L3i22_040070 PF04978 Protein of unknown function (DUF664) L3i22_040120 PF00144 Beta-lactamase L3i22_040130 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 L3i22_040130 PF00953 Glycosyl transferase family 4 L3i22_040140 PF08241 Methyltransferase domain L3i22_040230 PF00484 Carbonic anhydrase L3i22_040240 PF00561 alpha/beta hydrolase fold L3i22_040270 PF00563 EAL domain L3i22_040270 PF13185 GAF domain L3i22_040270 PF00990 Diguanylate cyclase, GGDEF domain L3i22_040330 PF17782 DprA winged helix domain L3i22_040330 PF02481 DNA recombination-mediator protein A L3i22_040370 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain L3i22_040370 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain L3i22_040390 PF00440 Bacterial regulatory proteins, tetR family L3i22_040390 PF16859 Tetracyclin repressor-like, C-terminal domain L3i22_040410 PF07992 Pyridine nucleotide-disulphide oxidoreductase L3i22_040410 PF00403 Heavy-metal-associated domain L3i22_040410 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain L3i22_040430 PF00578 AhpC/TSA family L3i22_040430 PF17991 Thioredoxin like C-terminal domain L3i22_040430 PF02683 Cytochrome C biogenesis protein transmembrane region L3i22_040440 PF08281 Sigma-70, region 4 L3i22_040440 PF04542 Sigma-70 region 2 L3i22_040470 PF00892 EamA-like transporter family L3i22_040510 PF00106 short chain dehydrogenase L3i22_040520 PF17754 MftR C-terminal domain L3i22_040520 PF00440 Bacterial regulatory proteins, tetR family L3i22_040540 PF01464 Transglycosylase SLT domain L3i22_040540 PF10145 Phage-related minor tail protein L3i22_040540 PF01551 Peptidase family M23 L3i22_040570 PF00544 Pectate lyase L3i22_040580 PF01095 Pectinesterase L3i22_040670 PF00480 ROK family L3i22_040690 PF00544 Pectate lyase L3i22_040700 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain L3i22_040700 PF04616 Glycosyl hydrolases family 43 L3i22_040730 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_040740 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_040750 PF14310 Fibronectin type III-like domain L3i22_040750 PF01915 Glycosyl hydrolase family 3 C-terminal domain L3i22_040750 PF00933 Glycosyl hydrolase family 3 N terminal domain L3i22_040770 PF02771 Acyl-CoA dehydrogenase, N-terminal domain L3i22_040770 PF08028 Acyl-CoA dehydrogenase, C-terminal domain L3i22_040780 PF12852 Cupin L3i22_040780 PF12833 Helix-turn-helix domain L3i22_040800 PF14521 Lysine-specific metallo-endopeptidase L3i22_040820 PF00512 His Kinase A (phospho-acceptor) domain L3i22_040820 PF00672 HAMP domain L3i22_040820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_040830 PF00072 Response regulator receiver domain L3i22_040830 PF13188 PAS domain L3i22_040830 PF08448 PAS fold L3i22_040830 PF00512 His Kinase A (phospho-acceptor) domain L3i22_040830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_040840 PF00512 His Kinase A (phospho-acceptor) domain L3i22_040840 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) L3i22_040840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_040840 PF00072 Response regulator receiver domain L3i22_040840 PF00672 HAMP domain L3i22_040840 PF01627 Hpt domain L3i22_040870 PF03976 Polyphosphate kinase 2 (PPK2) L3i22_040890 PF00331 Glycosyl hydrolase family 10 L3i22_040890 PF00553 Cellulose binding domain L3i22_040970 PF00480 ROK family L3i22_040990 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_041000 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_041010 PF16875 Glycosyl hydrolase family 36 N-terminal domain L3i22_041010 PF16874 Glycosyl hydrolase family 36 C-terminal domain L3i22_041070 PF01494 FAD binding domain L3i22_041080 PF01494 FAD binding domain L3i22_041090 PF01432 Peptidase family M3 L3i22_041110 PF03704 Bacterial transcriptional activator domain L3i22_041110 PF00931 NB-ARC domain L3i22_041110 PF00486 Transcriptional regulatory protein, C terminal L3i22_041130 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain L3i22_041130 PF18413 Neuraminidase-like domain L3i22_041190 PF00561 alpha/beta hydrolase fold L3i22_041260 PF01555 DNA methylase L3i22_041280 PF00107 Zinc-binding dehydrogenase L3i22_041280 PF08240 Alcohol dehydrogenase GroES-like domain L3i22_041290 PF00440 Bacterial regulatory proteins, tetR family L3i22_041290 PF16859 Tetracyclin repressor-like, C-terminal domain L3i22_041390 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain L3i22_041390 PF02777 Iron/manganese superoxide dismutases, C-terminal domain L3i22_041420 PF00544 Pectate lyase L3i22_041430 PF01095 Pectinesterase L3i22_041460 PF14525 AraC-binding-like domain L3i22_041460 PF12833 Helix-turn-helix domain L3i22_041480 PF14765 Polyketide synthase dehydratase L3i22_041480 PF02801 Beta-ketoacyl synthase, C-terminal domain L3i22_041480 PF00109 Beta-ketoacyl synthase, N-terminal domain L3i22_041480 PF00107 Zinc-binding dehydrogenase L3i22_041480 PF08240 Alcohol dehydrogenase GroES-like domain L3i22_041480 PF08659 KR domain L3i22_041480 PF00698 Acyl transferase domain L3i22_041480 PF00550 Phosphopantetheine attachment site L3i22_041480 PF16197 Ketoacyl-synthetase C-terminal extension L3i22_041500 PF01209 ubiE/COQ5 methyltransferase family L3i22_041510 PF00067 Cytochrome P450 L3i22_041540 PF00067 Cytochrome P450 L3i22_041550 PF00550 Phosphopantetheine attachment site L3i22_041550 PF00668 Condensation domain L3i22_041550 PF13193 AMP-binding enzyme C-terminal domain L3i22_041550 PF00501 AMP-binding enzyme L3i22_041560 PF16861 Carbamoyltransferase C-terminus L3i22_041560 PF02543 Carbamoyltransferase N-terminus L3i22_041570 PF13193 AMP-binding enzyme C-terminal domain L3i22_041570 PF00550 Phosphopantetheine attachment site L3i22_041570 PF07993 Male sterility protein L3i22_041570 PF00668 Condensation domain L3i22_041570 PF00501 AMP-binding enzyme L3i22_041590 PF00975 Thioesterase domain L3i22_041590 PF00550 Phosphopantetheine attachment site L3i22_041590 PF00668 Condensation domain L3i22_041590 PF13193 AMP-binding enzyme C-terminal domain L3i22_041590 PF00501 AMP-binding enzyme L3i22_041600 PF00266 Aminotransferase class-V L3i22_041640 PF00133 tRNA synthetases class I (I, L, M and V) L3i22_041640 PF08264 Anticodon-binding domain of tRNA L3i22_041660 PF07690 Major Facilitator Superfamily L3i22_041680 PF13847 Methyltransferase domain L3i22_041730 PF17820 PDZ domain L3i22_041730 PF02163 Peptidase family M50 L3i22_041830 PF00005 ABC transporter L3i22_041880 PF12704 MacB-like periplasmic core domain L3i22_041880 PF00005 ABC transporter L3i22_041880 PF02687 FtsX-like permease family L3i22_041890 PF03704 Bacterial transcriptional activator domain L3i22_041890 PF00931 NB-ARC domain L3i22_041890 PF00486 Transcriptional regulatory protein, C terminal L3i22_041900 PF07690 Major Facilitator Superfamily L3i22_041910 PF03279 Bacterial lipid A biosynthesis acyltransferase L3i22_041960 PF00072 Response regulator receiver domain L3i22_041960 PF00196 Bacterial regulatory proteins, luxR family L3i22_042090 PF00072 Response regulator receiver domain L3i22_042090 PF03861 ANTAR domain L3i22_042120 PF00753 Metallo-beta-lactamase superfamily L3i22_042130 PF01022 Bacterial regulatory protein, arsR family L3i22_042160 PF01545 Cation efflux family L3i22_042160 PF16916 Dimerisation domain of Zinc Transporter L3i22_042220 PF00293 NUDIX domain L3i22_042230 PF00376 MerR family regulatory protein L3i22_042230 PF09278 MerR, DNA binding L3i22_042250 PF00440 Bacterial regulatory proteins, tetR family L3i22_042260 PF00248 Aldo/keto reductase family L3i22_042300 PF04075 F420H(2)-dependent quinone reductase L3i22_042340 PF00561 alpha/beta hydrolase fold L3i22_042350 PF07690 Major Facilitator Superfamily L3i22_042380 PF00155 Aminotransferase class I and II L3i22_042430 PF00150 Cellulase (glycosyl hydrolase family 5) L3i22_042440 PF00563 EAL domain L3i22_042440 PF00990 Diguanylate cyclase, GGDEF domain L3i22_042440 PF03707 Bacterial signalling protein N terminal repeat L3i22_042450 PF12697 Alpha/beta hydrolase family L3i22_042480 PF02129 X-Pro dipeptidyl-peptidase (S15 family) L3i22_042480 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain L3i22_042490 PF08531 Alpha-L-rhamnosidase N-terminal domain L3i22_042490 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain L3i22_042490 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain L3i22_042490 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain L3i22_042590 PF13649 Methyltransferase domain L3i22_042630 PF18113 Rubredoxin binding C-terminal domain L3i22_042630 PF07992 Pyridine nucleotide-disulphide oxidoreductase L3i22_042660 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_042670 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_042680 PF13378 Enolase C-terminal domain-like L3i22_042680 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain L3i22_042710 PF00652 Ricin-type beta-trefoil lectin domain L3i22_042710 PF02983 Alpha-lytic protease prodomain L3i22_042730 PF02653 Branched-chain amino acid transport system / permease component L3i22_042740 PF00005 ABC transporter L3i22_042760 PF00005 ABC transporter L3i22_042770 PF02653 Branched-chain amino acid transport system / permease component L3i22_042780 PF13378 Enolase C-terminal domain-like L3i22_042780 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain L3i22_042790 PF00392 Bacterial regulatory proteins, gntR family L3i22_042790 PF07729 FCD domain L3i22_042820 PF00106 short chain dehydrogenase L3i22_042860 PF00106 short chain dehydrogenase L3i22_042870 PF01266 FAD dependent oxidoreductase L3i22_042880 PF08240 Alcohol dehydrogenase GroES-like domain L3i22_042880 PF00107 Zinc-binding dehydrogenase L3i22_042890 PF02126 Phosphotriesterase family L3i22_042900 PF07859 alpha/beta hydrolase fold L3i22_042910 PF00440 Bacterial regulatory proteins, tetR family L3i22_042930 PF16655 PhoD-like phosphatase, N-terminal domain L3i22_042930 PF09423 PhoD-like phosphatase L3i22_043010 PF01638 HxlR-like helix-turn-helix L3i22_043020 PF07992 Pyridine nucleotide-disulphide oxidoreductase L3i22_043050 PF12697 Alpha/beta hydrolase family L3i22_043070 PF04542 Sigma-70 region 2 L3i22_043070 PF08281 Sigma-70, region 4 L3i22_043070 PF12680 SnoaL-like domain L3i22_043080 PF00440 Bacterial regulatory proteins, tetR family L3i22_043100 PF00440 Bacterial regulatory proteins, tetR family L3i22_043120 PF00106 short chain dehydrogenase L3i22_043140 PF00291 Pyridoxal-phosphate dependent enzyme L3i22_043160 PF01252 Signal peptidase (SPase) II L3i22_043190 PF02481 DNA recombination-mediator protein A L3i22_043190 PF18255 DNA processing protein A sterile alpha motif domain L3i22_043210 PF00990 Diguanylate cyclase, GGDEF domain L3i22_043240 PF00106 short chain dehydrogenase L3i22_043280 PF00990 Diguanylate cyclase, GGDEF domain L3i22_043320 PF00150 Cellulase (glycosyl hydrolase family 5) L3i22_043320 PF00553 Cellulose binding domain L3i22_043330 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase L3i22_043330 PF09364 XFP N-terminal domain L3i22_043330 PF09363 XFP C-terminal domain L3i22_043360 PF00106 short chain dehydrogenase L3i22_043400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L3i22_043430 PF00106 short chain dehydrogenase L3i22_043440 PF00512 His Kinase A (phospho-acceptor) domain L3i22_043440 PF00672 HAMP domain L3i22_043440 PF13426 PAS domain L3i22_043440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_043450 PF13188 PAS domain L3i22_043450 PF08448 PAS fold L3i22_043450 PF00512 His Kinase A (phospho-acceptor) domain L3i22_043450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_043450 PF00072 Response regulator receiver domain L3i22_043460 PF00107 Zinc-binding dehydrogenase L3i22_043460 PF08240 Alcohol dehydrogenase GroES-like domain L3i22_043480 PF00072 Response regulator receiver domain L3i22_043510 PF03793 PASTA domain L3i22_043510 PF00069 Protein kinase domain L3i22_043580 PF13411 MerR HTH family regulatory protein L3i22_043600 PF00005 ABC transporter L3i22_043600 PF02687 FtsX-like permease family L3i22_043600 PF12704 MacB-like periplasmic core domain L3i22_043610 PF00282 Pyridoxal-dependent decarboxylase conserved domain L3i22_043620 PF00905 Penicillin binding protein transpeptidase domain L3i22_043620 PF00912 Transglycosylase L3i22_043630 PF00106 short chain dehydrogenase L3i22_043640 PF00313 'Cold-shock' DNA-binding domain L3i22_043670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_043670 PF00512 His Kinase A (phospho-acceptor) domain L3i22_043670 PF00672 HAMP domain L3i22_043680 PF00486 Transcriptional regulatory protein, C terminal L3i22_043680 PF00072 Response regulator receiver domain L3i22_043690 PF00356 Bacterial regulatory proteins, lacI family L3i22_043710 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_043720 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_043730 PF02449 Beta-galactosidase L3i22_043730 PF08532 Beta-galactosidase trimerisation domain L3i22_043730 PF08533 Beta-galactosidase C-terminal domain L3i22_043770 PF00990 Diguanylate cyclase, GGDEF domain L3i22_043770 PF17158 Membrane-associated sensor, integral membrane domain L3i22_043780 PF00990 Diguanylate cyclase, GGDEF domain L3i22_043780 PF03707 Bacterial signalling protein N terminal repeat L3i22_043780 PF00563 EAL domain L3i22_043790 PF00156 Phosphoribosyl transferase domain L3i22_043790 PF01738 Dienelactone hydrolase family L3i22_043820 PF00753 Metallo-beta-lactamase superfamily L3i22_043820 PF00581 Rhodanese-like domain L3i22_043840 PF00582 Universal stress protein family L3i22_043860 PF02254 TrkA-N domain L3i22_043860 PF00999 Sodium/hydrogen exchanger family L3i22_043870 PF00144 Beta-lactamase L3i22_043890 PF00690 Cation transporter/ATPase, N-terminus L3i22_043890 PF00689 Cation transporting ATPase, C-terminus L3i22_043910 PF13732 Domain of unknown function (DUF4162) L3i22_043910 PF00005 ABC transporter L3i22_043920 PF01738 Dienelactone hydrolase family L3i22_043920 PF00156 Phosphoribosyl transferase domain L3i22_043940 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 L3i22_043940 PF13542 Helix-turn-helix domain of transposase family ISL3 L3i22_043940 PF01610 Transposase L3i22_044040 PF01451 Low molecular weight phosphotyrosine protein phosphatase L3i22_044060 PF05651 Putative sugar diacid recognition L3i22_044060 PF13556 PucR C-terminal helix-turn-helix domain L3i22_044060 PF17853 GGDEF-like domain L3i22_044070 PF00931 NB-ARC domain L3i22_044070 PF00486 Transcriptional regulatory protein, C terminal L3i22_044070 PF03704 Bacterial transcriptional activator domain L3i22_044080 PF01820 D-ala D-ala ligase N-terminus L3i22_044080 PF07478 D-ala D-ala ligase C-terminus L3i22_044090 PF00842 Alanine racemase, C-terminal domain L3i22_044090 PF01168 Alanine racemase, N-terminal domain L3i22_044110 PF04545 Sigma-70, region 4 L3i22_044110 PF04542 Sigma-70 region 2 L3i22_044120 PF08031 Berberine and berberine like L3i22_044120 PF01565 FAD binding domain L3i22_044130 PF07690 Major Facilitator Superfamily L3i22_044140 PF00384 Molybdopterin oxidoreductase L3i22_044140 PF01568 Molydopterin dinucleotide binding domain L3i22_044150 PF13247 4Fe-4S dicluster domain L3i22_044150 PF14711 Respiratory nitrate reductase beta C-terminal L3i22_044160 PF02613 Nitrate reductase delta subunit L3i22_044170 PF02613 Nitrate reductase delta subunit L3i22_044170 PF00384 Molybdopterin oxidoreductase L3i22_044170 PF02665 Nitrate reductase gamma subunit L3i22_044200 PF00313 'Cold-shock' DNA-binding domain L3i22_044220 PF00990 Diguanylate cyclase, GGDEF domain L3i22_044250 PF00005 ABC transporter L3i22_044290 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily L3i22_044300 PF00171 Aldehyde dehydrogenase family L3i22_044310 PF00701 Dihydrodipicolinate synthetase family L3i22_044320 PF01557 Fumarylacetoacetate (FAA) hydrolase family L3i22_044330 PF05199 GMC oxidoreductase L3i22_044330 PF00732 GMC oxidoreductase L3i22_044340 PF17409 MoaF C-terminal domain L3i22_044340 PF10703 MoaF N-terminal domain L3i22_044360 PF02653 Branched-chain amino acid transport system / permease component L3i22_044380 PF00005 ABC transporter L3i22_044400 PF00171 Aldehyde dehydrogenase family L3i22_044430 PF00248 Aldo/keto reductase family L3i22_044480 PF12146 Serine aminopeptidase, S33 L3i22_044530 PF13537 Glutamine amidotransferase domain L3i22_044530 PF00733 Asparagine synthase L3i22_044570 PF08448 PAS fold L3i22_044570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_044570 PF00512 His Kinase A (phospho-acceptor) domain L3i22_044570 PF13188 PAS domain L3i22_044570 PF00072 Response regulator receiver domain L3i22_044580 PF17200 Single Cache domain 2 L3i22_044580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L3i22_044580 PF00672 HAMP domain L3i22_044590 PF00672 HAMP domain L3i22_044590 PF13426 PAS domain L3i22_044590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_044590 PF14827 Double sensory domain of two-component sensor kinase L3i22_044590 PF00512 His Kinase A (phospho-acceptor) domain L3i22_044610 PF00989 PAS fold L3i22_044610 PF16736 Single Cache-like L3i22_044610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_044610 PF00512 His Kinase A (phospho-acceptor) domain L3i22_044640 PF00561 alpha/beta hydrolase fold L3i22_044650 PF00931 NB-ARC domain L3i22_044650 PF03704 Bacterial transcriptional activator domain L3i22_044650 PF00486 Transcriptional regulatory protein, C terminal L3i22_044690 PF13185 GAF domain L3i22_044690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_044690 PF07730 Histidine kinase L3i22_044690 PF13492 GAF domain L3i22_044720 PF00672 HAMP domain L3i22_044720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L3i22_044730 PF01145 SPFH domain / Band 7 family L3i22_044760 PF08962 Domain of unknown function (DUF1876) L3i22_044770 PF00582 Universal stress protein family L3i22_044780 PF00011 Hsp20/alpha crystallin family L3i22_044790 PF00690 Cation transporter/ATPase, N-terminus L3i22_044790 PF00689 Cation transporting ATPase, C-terminus L3i22_044810 PF00582 Universal stress protein family L3i22_044820 PF08240 Alcohol dehydrogenase GroES-like domain L3i22_044820 PF00107 Zinc-binding dehydrogenase L3i22_044820 PF13823 Alcohol dehydrogenase GroES-associated L3i22_044840 PF01381 Helix-turn-helix L3i22_044850 PF06974 Protein of unknown function (DUF1298) L3i22_044850 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain L3i22_044860 PF13193 AMP-binding enzyme C-terminal domain L3i22_044860 PF00501 AMP-binding enzyme L3i22_044870 PF01553 Acyltransferase L3i22_044880 PF01553 Acyltransferase L3i22_044890 PF13607 Succinyl-CoA ligase like flavodoxin domain L3i22_044890 PF13380 CoA binding domain L3i22_044890 PF00583 Acetyltransferase (GNAT) family L3i22_044930 PF00582 Universal stress protein family L3i22_044960 PF02769 AIR synthase related protein, C-terminal domain L3i22_044960 PF00586 AIR synthase related protein, N-terminal domain L3i22_044980 PF00005 ABC transporter L3i22_044980 PF13732 Domain of unknown function (DUF4162) L3i22_045050 PF00561 alpha/beta hydrolase fold L3i22_045060 PF03636 Glycosyl hydrolase family 65, N-terminal domain L3i22_045060 PF03632 Glycosyl hydrolase family 65 central catalytic domain L3i22_045060 PF03633 Glycosyl hydrolase family 65, C-terminal domain L3i22_045080 PF02583 Metal-sensitive transcriptional repressor L3i22_045100 PF00486 Transcriptional regulatory protein, C terminal L3i22_045100 PF00072 Response regulator receiver domain L3i22_045110 PF00989 PAS fold L3i22_045110 PF00512 His Kinase A (phospho-acceptor) domain L3i22_045110 PF18698 Histidine kinase sensor domain L3i22_045110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_045110 PF00672 HAMP domain L3i22_045150 PF04358 DsrC like protein L3i22_045170 PF00582 Universal stress protein family L3i22_045190 PF13607 Succinyl-CoA ligase like flavodoxin domain L3i22_045190 PF13380 CoA binding domain L3i22_045200 PF17912 MalK OB fold domain L3i22_045200 PF03459 TOBE domain L3i22_045200 PF00005 ABC transporter L3i22_045210 PF00582 Universal stress protein family L3i22_045230 PF00005 ABC transporter L3i22_045230 PF13732 Domain of unknown function (DUF4162) L3i22_045240 PF00571 CBS domain L3i22_045240 PF02163 Peptidase family M50 L3i22_045270 PF00582 Universal stress protein family L3i22_045300 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain L3i22_045300 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg L3i22_045300 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase L3i22_045300 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II L3i22_045300 PF10371 Domain of unknown function L3i22_045310 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster L3i22_045310 PF07992 Pyridine nucleotide-disulphide oxidoreductase L3i22_045320 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch L3i22_045320 PF01262 Alanine dehydrogenase/PNT, C-terminal domain L3i22_045320 PF05222 Alanine dehydrogenase/PNT, N-terminal domain L3i22_045340 PF02233 NAD(P) transhydrogenase beta subunit L3i22_045350 PF00300 Histidine phosphatase superfamily (branch 1) L3i22_045390 PF01791 DeoC/LacD family aldolase L3i22_045430 PF01569 PAP2 superfamily L3i22_045520 PF01183 Glycosyl hydrolases family 25 L3i22_045520 PF01471 Putative peptidoglycan binding domain L3i22_045550 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus L3i22_045560 PF00582 Universal stress protein family L3i22_045570 PF07690 Major Facilitator Superfamily L3i22_045590 PF00724 NADH:flavin oxidoreductase / NADH oxidase family L3i22_045590 PF07992 Pyridine nucleotide-disulphide oxidoreductase L3i22_045610 PF06259 Alpha/beta hydrolase L3i22_045630 PF01427 D-ala-D-ala dipeptidase L3i22_045670 PF12792 CSS motif domain associated with EAL L3i22_045670 PF00563 EAL domain L3i22_045700 PF00085 Thioredoxin L3i22_045710 PF00480 ROK family L3i22_045720 PF07690 Major Facilitator Superfamily L3i22_045750 PF00970 Oxidoreductase FAD-binding domain L3i22_045750 PF00042 Globin L3i22_045750 PF00175 Oxidoreductase NAD-binding domain L3i22_045760 PF00563 EAL domain L3i22_045760 PF00990 Diguanylate cyclase, GGDEF domain L3i22_045760 PF03707 Bacterial signalling protein N terminal repeat L3i22_045780 PF00072 Response regulator receiver domain L3i22_045780 PF00486 Transcriptional regulatory protein, C terminal L3i22_045790 PF00672 HAMP domain L3i22_045790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_045790 PF00512 His Kinase A (phospho-acceptor) domain L3i22_045810 PF00005 ABC transporter L3i22_045810 PF13732 Domain of unknown function (DUF4162) L3i22_045830 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain L3i22_045830 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain L3i22_045850 PF00990 Diguanylate cyclase, GGDEF domain L3i22_045850 PF01590 GAF domain L3i22_045850 PF00563 EAL domain L3i22_045850 PF00360 Phytochrome region L3i22_045860 PF16338 Domain of unknown function (DUF4968) L3i22_045860 PF01055 Glycosyl hydrolases family 31 L3i22_045860 PF13802 Galactose mutarotase-like L3i22_045860 PF17137 Domain of unknown function (DUF5110) L3i22_045890 PF17200 Single Cache domain 2 L3i22_045890 PF00672 HAMP domain L3i22_045890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L3i22_045920 PF00457 Glycosyl hydrolases family 11 L3i22_045920 PF03422 Carbohydrate binding module (family 6) L3i22_046050 PF03055 Retinal pigment epithelial membrane protein L3i22_046060 PF00486 Transcriptional regulatory protein, C terminal L3i22_046060 PF00498 FHA domain L3i22_046060 PF03704 Bacterial transcriptional activator domain L3i22_046090 PF00474 Sodium:solute symporter family L3i22_046110 PF03704 Bacterial transcriptional activator domain L3i22_046110 PF00486 Transcriptional regulatory protein, C terminal L3i22_046110 PF00931 NB-ARC domain L3i22_046120 PF04542 Sigma-70 region 2 L3i22_046120 PF08281 Sigma-70, region 4 L3i22_046140 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain L3i22_046140 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain L3i22_046160 PF12146 Serine aminopeptidase, S33 L3i22_046170 PF00132 Bacterial transferase hexapeptide (six repeats) L3i22_046170 PF12464 Maltose acetyltransferase L3i22_046200 PF13350 Tyrosine phosphatase family L3i22_046250 PF00196 Bacterial regulatory proteins, luxR family L3i22_046250 PF00072 Response regulator receiver domain L3i22_046260 PF07730 Histidine kinase L3i22_046270 PF03176 MMPL family L3i22_046280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L3i22_046280 PF03466 LysR substrate binding domain L3i22_046300 PF04389 Peptidase family M28 L3i22_046300 PF01447 Thermolysin metallopeptidase, catalytic domain L3i22_046300 PF02868 Thermolysin metallopeptidase, alpha-helical domain L3i22_046360 PF00561 alpha/beta hydrolase fold L3i22_046460 PF07859 alpha/beta hydrolase fold L3i22_046480 PF01212 Beta-eliminating lyase L3i22_046580 PF01037 Lrp/AsnC ligand binding domain L3i22_046590 PF00676 Dehydrogenase E1 component L3i22_046600 PF02780 Transketolase, C-terminal domain L3i22_046600 PF02779 Transketolase, pyrimidine binding domain L3i22_046610 PF02817 e3 binding domain L3i22_046610 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) L3i22_046610 PF00364 Biotin-requiring enzyme L3i22_046640 PF00561 alpha/beta hydrolase fold L3i22_046700 PF00491 Arginase family L3i22_046720 PF01381 Helix-turn-helix L3i22_046720 PF07883 Cupin domain L3i22_046740 PF10431 C-terminal, D2-small domain, of ClpB protein L3i22_046740 PF00004 ATPase family associated with various cellular activities (AAA) L3i22_046740 PF17871 AAA lid domain L3i22_046740 PF07724 AAA domain (Cdc48 subfamily) L3i22_046740 PF02861 Clp amino terminal domain, pathogenicity island component L3i22_046760 PF00106 short chain dehydrogenase L3i22_046800 PF00360 Phytochrome region L3i22_046800 PF08446 PAS fold L3i22_046800 PF00512 His Kinase A (phospho-acceptor) domain L3i22_046800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_046800 PF01590 GAF domain L3i22_046820 PF01418 Helix-turn-helix domain, rpiR family L3i22_046820 PF01380 SIS domain L3i22_046830 PF01547 Bacterial extracellular solute-binding protein L3i22_046840 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_046850 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_046860 PF00728 Glycosyl hydrolase family 20, catalytic domain L3i22_046860 PF02838 Glycosyl hydrolase family 20, domain 2 L3i22_046860 PF07691 PA14 domain L3i22_046930 PF00480 ROK family L3i22_046940 PF13407 Periplasmic binding protein domain L3i22_046950 PF00005 ABC transporter L3i22_046960 PF02653 Branched-chain amino acid transport system / permease component L3i22_046970 PF00480 ROK family L3i22_047000 PF13439 Glycosyltransferase Family 4 L3i22_047000 PF00534 Glycosyl transferases group 1 L3i22_047010 PF02585 GlcNAc-PI de-N-acetylase L3i22_047020 PF00535 Glycosyl transferase family 2 L3i22_047070 PF16925 Tetracyclin repressor-like, C-terminal domain L3i22_047070 PF00440 Bacterial regulatory proteins, tetR family L3i22_047090 PF01638 HxlR-like helix-turn-helix L3i22_047100 PF16925 Tetracyclin repressor-like, C-terminal domain L3i22_047100 PF00440 Bacterial regulatory proteins, tetR family L3i22_047120 PF01638 HxlR-like helix-turn-helix L3i22_047170 PF00248 Aldo/keto reductase family L3i22_047190 PF02417 Chromate transporter L3i22_047210 PF01451 Low molecular weight phosphotyrosine protein phosphatase L3i22_047240 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_047250 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_047260 PF00356 Bacterial regulatory proteins, lacI family L3i22_047270 PF00933 Glycosyl hydrolase family 3 N terminal domain L3i22_047270 PF01915 Glycosyl hydrolase family 3 C-terminal domain L3i22_047270 PF14310 Fibronectin type III-like domain L3i22_047300 PF01022 Bacterial regulatory protein, arsR family L3i22_047310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_047310 PF07730 Histidine kinase L3i22_047320 PF00196 Bacterial regulatory proteins, luxR family L3i22_047320 PF00072 Response regulator receiver domain L3i22_047330 PF00486 Transcriptional regulatory protein, C terminal L3i22_047330 PF00931 NB-ARC domain L3i22_047330 PF03704 Bacterial transcriptional activator domain L3i22_047340 PF00067 Cytochrome P450 L3i22_047420 PF07730 Histidine kinase L3i22_047420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_047430 PF00072 Response regulator receiver domain L3i22_047430 PF00196 Bacterial regulatory proteins, luxR family L3i22_047440 PF01483 Proprotein convertase P-domain L3i22_047440 PF01447 Thermolysin metallopeptidase, catalytic domain L3i22_047440 PF02868 Thermolysin metallopeptidase, alpha-helical domain L3i22_047440 PF07504 Fungalysin/Thermolysin Propeptide Motif L3i22_047540 PF03621 MbtH-like protein L3i22_047560 PF01209 ubiE/COQ5 methyltransferase family L3i22_047590 PF00550 Phosphopantetheine attachment site L3i22_047590 PF00109 Beta-ketoacyl synthase, N-terminal domain L3i22_047590 PF16197 Ketoacyl-synthetase C-terminal extension L3i22_047590 PF00668 Condensation domain L3i22_047590 PF00698 Acyl transferase domain L3i22_047590 PF02801 Beta-ketoacyl synthase, C-terminal domain L3i22_047600 PF00391 PEP-utilising enzyme, mobile domain L3i22_047600 PF00668 Condensation domain L3i22_047600 PF00550 Phosphopantetheine attachment site L3i22_047600 PF00975 Thioesterase domain L3i22_047600 PF00501 AMP-binding enzyme L3i22_047600 PF13193 AMP-binding enzyme C-terminal domain L3i22_047600 PF08241 Methyltransferase domain L3i22_047610 PF08241 Methyltransferase domain L3i22_047620 PF02801 Beta-ketoacyl synthase, C-terminal domain L3i22_047620 PF00550 Phosphopantetheine attachment site L3i22_047620 PF00698 Acyl transferase domain L3i22_047620 PF00668 Condensation domain L3i22_047620 PF16197 Ketoacyl-synthetase C-terminal extension L3i22_047620 PF00109 Beta-ketoacyl synthase, N-terminal domain L3i22_047630 PF00391 PEP-utilising enzyme, mobile domain L3i22_047630 PF00668 Condensation domain L3i22_047630 PF00501 AMP-binding enzyme L3i22_047630 PF13193 AMP-binding enzyme C-terminal domain L3i22_047630 PF00975 Thioesterase domain L3i22_047630 PF00550 Phosphopantetheine attachment site L3i22_047630 PF08241 Methyltransferase domain L3i22_047640 PF00975 Thioesterase domain L3i22_047660 PF04151 Bacterial pre-peptidase C-terminal domain L3i22_047660 PF09286 Pro-kumamolisin, activation domain L3i22_047670 PF03551 Transcriptional regulator PadR-like family L3i22_047710 PF07728 AAA domain (dynein-related subfamily) L3i22_047710 PF12102 Domain of unknown function (DUF3578) L3i22_047730 PF01047 MarR family L3i22_047740 PF01717 Cobalamin-independent synthase, Catalytic domain L3i22_047740 PF08267 Cobalamin-independent synthase, N-terminal domain L3i22_047750 PF03707 Bacterial signalling protein N terminal repeat L3i22_047750 PF00990 Diguanylate cyclase, GGDEF domain L3i22_047750 PF00563 EAL domain L3i22_047760 PF02801 Beta-ketoacyl synthase, C-terminal domain L3i22_047760 PF00109 Beta-ketoacyl synthase, N-terminal domain L3i22_047800 PF00069 Protein kinase domain L3i22_047800 PF03793 PASTA domain L3i22_047830 PF04542 Sigma-70 region 2 L3i22_047830 PF08281 Sigma-70, region 4 L3i22_047850 PF00561 alpha/beta hydrolase fold L3i22_047870 PF01738 Dienelactone hydrolase family L3i22_047890 PF00296 Luciferase-like monooxygenase L3i22_047950 PF00561 alpha/beta hydrolase fold L3i22_047990 PF00005 ABC transporter L3i22_048030 PF12323 Helix-turn-helix domain L3i22_048030 PF01385 Probable transposase L3i22_048030 PF07282 Putative transposase DNA-binding domain L3i22_048050 PF07992 Pyridine nucleotide-disulphide oxidoreductase L3i22_048050 PF14759 Reductase C-terminal L3i22_048080 PF02515 CoA-transferase family III L3i22_048090 PF00108 Thiolase, N-terminal domain L3i22_048090 PF02803 Thiolase, C-terminal domain L3i22_048120 PF00067 Cytochrome P450 L3i22_048140 PF00440 Bacterial regulatory proteins, tetR family L3i22_048160 PF07992 Pyridine nucleotide-disulphide oxidoreductase L3i22_048210 PF07992 Pyridine nucleotide-disulphide oxidoreductase L3i22_048220 PF00037 4Fe-4S binding domain L3i22_048230 PF06902 Divergent 4Fe-4S mono-cluster L3i22_048240 PF00067 Cytochrome P450 L3i22_048250 PF00440 Bacterial regulatory proteins, tetR family L3i22_048250 PF17925 Tetracyclin repressor-like, C-terminal domain L3i22_048270 PF00171 Aldehyde dehydrogenase family L3i22_048290 PF01070 FMN-dependent dehydrogenase L3i22_048300 PF17754 MftR C-terminal domain L3i22_048300 PF00440 Bacterial regulatory proteins, tetR family L3i22_048310 PF00535 Glycosyl transferase family 2 L3i22_048320 PF02633 Creatinine amidohydrolase L3i22_048330 PF01070 FMN-dependent dehydrogenase L3i22_048340 PF13186 Iron-sulfur cluster-binding domain L3i22_048340 PF04055 Radical SAM superfamily L3i22_048370 PF05199 GMC oxidoreductase L3i22_048370 PF00732 GMC oxidoreductase L3i22_048410 PF00106 short chain dehydrogenase L3i22_048420 PF00067 Cytochrome P450 L3i22_048500 PF00072 Response regulator receiver domain L3i22_048500 PF00196 Bacterial regulatory proteins, luxR family L3i22_048520 PF00012 Hsp70 protein L3i22_048540 PF02894 Oxidoreductase family, C-terminal alpha/beta domain L3i22_048540 PF01408 Oxidoreductase family, NAD-binding Rossmann fold L3i22_048560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L3i22_048560 PF03466 LysR substrate binding domain L3i22_048570 PF00356 Bacterial regulatory proteins, lacI family L3i22_048580 PF01047 MarR family L3i22_048580 PF00480 ROK family L3i22_048600 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_048610 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_048620 PF02836 Glycosyl hydrolases family 2, TIM barrel domain L3i22_048620 PF02929 Beta galactosidase small chain L3i22_048620 PF16353 Domain of unknown function(DUF4981) L3i22_048620 PF00703 Glycosyl hydrolases family 2 L3i22_048620 PF02837 Glycosyl hydrolases family 2, sugar binding domain L3i22_048710 PF00293 NUDIX domain L3i22_048710 PF03099 Biotin/lipoate A/B protein ligase family L3i22_048720 PF02156 Glycosyl hydrolase family 26 L3i22_048740 PF00480 ROK family L3i22_048770 PF00459 Inositol monophosphatase family L3i22_048820 PF08450 SMP-30/Gluconolactonase/LRE-like region L3i22_048830 PF00920 Dehydratase family L3i22_048840 PF00106 short chain dehydrogenase L3i22_048860 PF02310 B12 binding domain L3i22_048860 PF01642 Methylmalonyl-CoA mutase L3i22_048940 PF14765 Polyketide synthase dehydratase L3i22_048940 PF16197 Ketoacyl-synthetase C-terminal extension L3i22_048940 PF00109 Beta-ketoacyl synthase, N-terminal domain L3i22_048940 PF02801 Beta-ketoacyl synthase, C-terminal domain L3i22_048940 PF08659 KR domain L3i22_048940 PF00550 Phosphopantetheine attachment site L3i22_048950 PF16197 Ketoacyl-synthetase C-terminal extension L3i22_048950 PF00550 Phosphopantetheine attachment site L3i22_048950 PF08659 KR domain L3i22_048950 PF02801 Beta-ketoacyl synthase, C-terminal domain L3i22_048950 PF00109 Beta-ketoacyl synthase, N-terminal domain L3i22_048950 PF14765 Polyketide synthase dehydratase L3i22_048950 PF00501 AMP-binding enzyme L3i22_048950 PF13193 AMP-binding enzyme C-terminal domain L3i22_048950 PF00668 Condensation domain L3i22_048960 PF00698 Acyl transferase domain L3i22_048960 PF08990 Erythronolide synthase docking L3i22_048960 PF16197 Ketoacyl-synthetase C-terminal extension L3i22_048960 PF00109 Beta-ketoacyl synthase, N-terminal domain L3i22_048960 PF02801 Beta-ketoacyl synthase, C-terminal domain L3i22_048960 PF08659 KR domain L3i22_048960 PF00550 Phosphopantetheine attachment site L3i22_048960 PF00975 Thioesterase domain L3i22_048970 PF01494 FAD binding domain L3i22_048990 PF00144 Beta-lactamase L3i22_049000 PF00698 Acyl transferase domain L3i22_049030 PF01596 O-methyltransferase L3i22_049050 PF00224 Pyruvate kinase, barrel domain L3i22_049050 PF02887 Pyruvate kinase, alpha/beta domain L3i22_049070 PF00224 Pyruvate kinase, barrel domain L3i22_049070 PF02887 Pyruvate kinase, alpha/beta domain L3i22_049080 PF07690 Major Facilitator Superfamily L3i22_049100 PF13537 Glutamine amidotransferase domain L3i22_049100 PF00733 Asparagine synthase L3i22_049120 PF13439 Glycosyltransferase Family 4 L3i22_049170 PF00255 Glutathione peroxidase L3i22_049220 PF16859 Tetracyclin repressor-like, C-terminal domain L3i22_049220 PF00440 Bacterial regulatory proteins, tetR family L3i22_049240 PF09594 Glycosyltransferase family 87 L3i22_049250 PF01209 ubiE/COQ5 methyltransferase family L3i22_049280 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_049290 PF00005 ABC transporter L3i22_049300 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain L3i22_049300 PF17203 Single cache domain 3 L3i22_049300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_049300 PF00989 PAS fold L3i22_049310 PF12431 Transcriptional regulator L3i22_049310 PF00072 Response regulator receiver domain L3i22_049320 PF04539 Sigma-70 region 3 L3i22_049320 PF04545 Sigma-70, region 4 L3i22_049320 PF04542 Sigma-70 region 2 L3i22_049330 PF00891 O-methyltransferase domain L3i22_049340 PF04072 Leucine carboxyl methyltransferase L3i22_049370 PF03704 Bacterial transcriptional activator domain L3i22_049370 PF00931 NB-ARC domain L3i22_049370 PF00486 Transcriptional regulatory protein, C terminal L3i22_049400 PF00440 Bacterial regulatory proteins, tetR family L3i22_049410 PF08240 Alcohol dehydrogenase GroES-like domain L3i22_049410 PF00107 Zinc-binding dehydrogenase L3i22_049430 PF07729 FCD domain L3i22_049430 PF00392 Bacterial regulatory proteins, gntR family L3i22_049440 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle L3i22_049450 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_049460 PF00005 ABC transporter L3i22_049460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L3i22_049470 PF00005 ABC transporter L3i22_049470 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L3i22_049480 PF00701 Dihydrodipicolinate synthetase family L3i22_049490 PF00480 ROK family L3i22_049500 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase L3i22_049580 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_049590 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_049620 PF00331 Glycosyl hydrolase family 10 L3i22_049620 PF00553 Cellulose binding domain L3i22_049630 PF06964 Alpha-L-arabinofuranosidase C-terminal domain L3i22_049640 PF04616 Glycosyl hydrolases family 43 L3i22_049640 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain L3i22_049660 PF00553 Cellulose binding domain L3i22_049660 PF01341 Glycosyl hydrolases family 6 L3i22_049670 PF00652 Ricin-type beta-trefoil lectin domain L3i22_049670 PF00331 Glycosyl hydrolase family 10 L3i22_049680 PF17801 Alpha galactosidase C-terminal beta sandwich domain L3i22_049680 PF16499 Alpha galactosidase A L3i22_049690 PF03422 Carbohydrate binding module (family 6) L3i22_049690 PF04616 Glycosyl hydrolases family 43 L3i22_049720 PF00652 Ricin-type beta-trefoil lectin domain L3i22_049720 PF03664 Glycosyl hydrolase family 62 L3i22_049740 PF00652 Ricin-type beta-trefoil lectin domain L3i22_049740 PF03664 Glycosyl hydrolase family 62 L3i22_049750 PF00652 Ricin-type beta-trefoil lectin domain L3i22_049750 PF00331 Glycosyl hydrolase family 10 L3i22_049780 PF13378 Enolase C-terminal domain-like L3i22_049780 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain L3i22_049790 PF03442 Carbohydrate binding domain X2 L3i22_049790 PF00942 Cellulose binding domain L3i22_049790 PF00759 Glycosyl hydrolase family 9 L3i22_049800 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_049810 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_049820 PF01547 Bacterial extracellular solute-binding protein L3i22_049910 PF05922 Peptidase inhibitor I9 L3i22_049910 PF00082 Subtilase family L3i22_049940 PF05448 Acetyl xylan esterase (AXE1) L3i22_049950 PF16874 Glycosyl hydrolase family 36 C-terminal domain L3i22_049950 PF16875 Glycosyl hydrolase family 36 N-terminal domain L3i22_049960 PF00480 ROK family L3i22_049980 PF00535 Glycosyl transferase family 2 L3i22_049990 PF02839 Carbohydrate binding domain L3i22_050000 PF12697 Alpha/beta hydrolase family L3i22_050020 PF00722 Glycosyl hydrolases family 16 L3i22_050030 PF02156 Glycosyl hydrolase family 26 L3i22_050030 PF00404 Dockerin type I domain L3i22_050030 PF00150 Cellulase (glycosyl hydrolase family 5) L3i22_050030 PF03425 Carbohydrate binding domain (family 11) L3i22_050040 PF00356 Bacterial regulatory proteins, lacI family L3i22_050170 PF13977 BetI-type transcriptional repressor, C-terminal L3i22_050170 PF00440 Bacterial regulatory proteins, tetR family L3i22_050200 PF02423 Ornithine cyclodeaminase/mu-crystallin family L3i22_050210 PF00221 Aromatic amino acid lyase L3i22_050220 PF00356 Bacterial regulatory proteins, lacI family L3i22_050260 PF08281 Sigma-70, region 4 L3i22_050260 PF04542 Sigma-70 region 2 L3i22_050310 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L3i22_050310 PF00005 ABC transporter L3i22_050320 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L3i22_050320 PF00005 ABC transporter L3i22_050330 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_050330 PF12911 N-terminal TM domain of oligopeptide transport permease C L3i22_050340 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_050350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle L3i22_050370 PF08240 Alcohol dehydrogenase GroES-like domain L3i22_050370 PF00107 Zinc-binding dehydrogenase L3i22_050390 PF01047 MarR family L3i22_050400 PF00221 Aromatic amino acid lyase L3i22_050410 PF00005 ABC transporter L3i22_050410 PF00571 CBS domain L3i22_050420 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_050430 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_050450 PF00563 EAL domain L3i22_050460 PF13411 MerR HTH family regulatory protein L3i22_050460 PF07739 TipAS antibiotic-recognition domain L3i22_050470 PF01061 ABC-2 type transporter L3i22_050480 PF00005 ABC transporter L3i22_050480 PF13732 Domain of unknown function (DUF4162) L3i22_050490 PF07690 Major Facilitator Superfamily L3i22_050530 PF02540 NAD synthase L3i22_050550 PF00005 ABC transporter L3i22_050560 PF00072 Response regulator receiver domain L3i22_050560 PF00196 Bacterial regulatory proteins, luxR family L3i22_050570 PF07730 Histidine kinase L3i22_050610 PF00069 Protein kinase domain L3i22_050610 PF03793 PASTA domain L3i22_050660 PF04542 Sigma-70 region 2 L3i22_050660 PF08281 Sigma-70, region 4 L3i22_050660 PF12680 SnoaL-like domain L3i22_050670 PF00550 Phosphopantetheine attachment site L3i22_050670 PF00109 Beta-ketoacyl synthase, N-terminal domain L3i22_050670 PF02801 Beta-ketoacyl synthase, C-terminal domain L3i22_050670 PF14765 Polyketide synthase dehydratase L3i22_050670 PF16197 Ketoacyl-synthetase C-terminal extension L3i22_050670 PF08659 KR domain L3i22_050670 PF00698 Acyl transferase domain L3i22_050670 PF09277 Erythronolide synthase, docking L3i22_050670 PF08240 Alcohol dehydrogenase GroES-like domain L3i22_050670 PF08990 Erythronolide synthase docking L3i22_050690 PF00196 Bacterial regulatory proteins, luxR family L3i22_050700 PF00072 Response regulator receiver domain L3i22_050700 PF00196 Bacterial regulatory proteins, luxR family L3i22_050750 PF01522 Polysaccharide deacetylase L3i22_050750 PF00457 Glycosyl hydrolases family 11 L3i22_050760 PF00457 Glycosyl hydrolases family 11 L3i22_050770 PF00171 Aldehyde dehydrogenase family L3i22_050770 PF00465 Iron-containing alcohol dehydrogenase L3i22_050780 PF00582 Universal stress protein family L3i22_050790 PF00582 Universal stress protein family L3i22_050800 PF00571 CBS domain L3i22_050800 PF00478 IMP dehydrogenase / GMP reductase domain L3i22_050820 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain L3i22_050820 PF02896 PEP-utilising enzyme, TIM barrel domain L3i22_050820 PF00391 PEP-utilising enzyme, mobile domain L3i22_050840 PF07730 Histidine kinase L3i22_050840 PF13185 GAF domain L3i22_050840 PF13492 GAF domain L3i22_050840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_050880 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain L3i22_050880 PF13378 Enolase C-terminal domain-like L3i22_050890 PF00990 Diguanylate cyclase, GGDEF domain L3i22_050890 PF03707 Bacterial signalling protein N terminal repeat L3i22_050890 PF00563 EAL domain L3i22_050900 PF00440 Bacterial regulatory proteins, tetR family L3i22_050980 PF12697 Alpha/beta hydrolase family L3i22_050990 PF01638 HxlR-like helix-turn-helix L3i22_051010 PF01625 Peptide methionine sulfoxide reductase L3i22_051050 PF12833 Helix-turn-helix domain L3i22_051050 PF01965 DJ-1/PfpI family L3i22_051130 PF02894 Oxidoreductase family, C-terminal alpha/beta domain L3i22_051130 PF01408 Oxidoreductase family, NAD-binding Rossmann fold L3i22_051150 PF01370 NAD dependent epimerase/dehydratase family L3i22_051180 PF12697 Alpha/beta hydrolase family L3i22_051190 PF00356 Bacterial regulatory proteins, lacI family L3i22_051200 PF01547 Bacterial extracellular solute-binding protein L3i22_051210 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_051220 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_051230 PF04041 beta-1,4-mannooligosaccharide phosphorylase L3i22_051250 PF12833 Helix-turn-helix domain L3i22_051250 PF01965 DJ-1/PfpI family L3i22_051270 PF01032 FecCD transport family L3i22_051290 PF00005 ABC transporter L3i22_051320 PF01839 FG-GAP repeat L3i22_051320 PF18370 Rhamnogalacturonan I lyases beta-sheet domain L3i22_051330 PF18370 Rhamnogalacturonan I lyases beta-sheet domain L3i22_051360 PF13026 Protein of unknown function (DUF3887) L3i22_051360 PF12146 Serine aminopeptidase, S33 L3i22_051420 PF09856 Predicted transcriptional regulator (DUF2083) L3i22_051420 PF01381 Helix-turn-helix L3i22_051420 PF06114 IrrE N-terminal-like domain L3i22_051430 PF01642 Methylmalonyl-CoA mutase L3i22_051440 PF01642 Methylmalonyl-CoA mutase L3i22_051440 PF02310 B12 binding domain L3i22_051460 PF00478 IMP dehydrogenase / GMP reductase domain L3i22_051460 PF00571 CBS domain L3i22_051480 PF03364 Polyketide cyclase / dehydrase and lipid transport L3i22_051490 PF13305 Tetracyclin repressor-like, C-terminal domain L3i22_051490 PF00440 Bacterial regulatory proteins, tetR family L3i22_051500 PF01494 FAD binding domain L3i22_051510 PF02705 K+ potassium transporter L3i22_051520 PF03707 Bacterial signalling protein N terminal repeat L3i22_051520 PF00563 EAL domain L3i22_051520 PF00990 Diguanylate cyclase, GGDEF domain L3i22_051530 PF00563 EAL domain L3i22_051530 PF08447 PAS fold L3i22_051530 PF05231 MASE1 L3i22_051530 PF00990 Diguanylate cyclase, GGDEF domain L3i22_051530 PF08448 PAS fold L3i22_051530 PF13426 PAS domain L3i22_051630 PF01545 Cation efflux family L3i22_051630 PF16916 Dimerisation domain of Zinc Transporter L3i22_051650 PF16859 Tetracyclin repressor-like, C-terminal domain L3i22_051650 PF00440 Bacterial regulatory proteins, tetR family L3i22_051660 PF00107 Zinc-binding dehydrogenase L3i22_051660 PF08240 Alcohol dehydrogenase GroES-like domain L3i22_051720 PF06965 Na+/H+ antiporter 1 L3i22_051720 PF13462 Thioredoxin L3i22_051730 PF00072 Response regulator receiver domain L3i22_051730 PF00512 His Kinase A (phospho-acceptor) domain L3i22_051730 PF01627 Hpt domain L3i22_051730 PF00672 HAMP domain L3i22_051730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_051740 PF00196 Bacterial regulatory proteins, luxR family L3i22_051740 PF00072 Response regulator receiver domain L3i22_051750 PF05922 Peptidase inhibitor I9 L3i22_051750 PF00082 Subtilase family L3i22_051780 PF00440 Bacterial regulatory proteins, tetR family L3i22_051790 PF00248 Aldo/keto reductase family L3i22_051800 PF00542 Ribosomal protein L7/L12 C-terminal domain L3i22_051800 PF16320 Ribosomal protein L7/L12 dimerisation domain L3i22_051880 PF04542 Sigma-70 region 2 L3i22_051880 PF08281 Sigma-70, region 4 L3i22_051880 PF12680 SnoaL-like domain L3i22_051910 PF01475 Ferric uptake regulator family L3i22_051920 PF00141 Peroxidase L3i22_051930 PF00069 Protein kinase domain L3i22_051950 PF00999 Sodium/hydrogen exchanger family L3i22_051960 PF03466 LysR substrate binding domain L3i22_051960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L3i22_051970 PF00892 EamA-like transporter family L3i22_051990 PF02694 Uncharacterised BCR, YnfA/UPF0060 family L3i22_052000 PF01494 FAD binding domain L3i22_052020 PF04542 Sigma-70 region 2 L3i22_052020 PF08281 Sigma-70, region 4 L3i22_052100 PF01039 Carboxyl transferase domain L3i22_052110 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain L3i22_052110 PF00289 Biotin carboxylase, N-terminal domain L3i22_052110 PF00364 Biotin-requiring enzyme L3i22_052110 PF02785 Biotin carboxylase C-terminal domain L3i22_052120 PF02771 Acyl-CoA dehydrogenase, N-terminal domain L3i22_052120 PF02770 Acyl-CoA dehydrogenase, middle domain L3i22_052120 PF00441 Acyl-CoA dehydrogenase, C-terminal domain L3i22_052140 PF01095 Pectinesterase L3i22_052150 PF07730 Histidine kinase L3i22_052150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_052160 PF00196 Bacterial regulatory proteins, luxR family L3i22_052160 PF00072 Response regulator receiver domain L3i22_052170 PF00067 Cytochrome P450 L3i22_052270 PF00202 Aminotransferase class-III L3i22_052280 PF00171 Aldehyde dehydrogenase family L3i22_052310 PF00571 CBS domain L3i22_052310 PF00478 IMP dehydrogenase / GMP reductase domain L3i22_052360 PF07690 Major Facilitator Superfamily L3i22_052380 PF00364 Biotin-requiring enzyme L3i22_052380 PF00561 alpha/beta hydrolase fold L3i22_052400 PF01161 Phosphatidylethanolamine-binding protein L3i22_052420 PF01370 NAD dependent epimerase/dehydratase family L3i22_052430 PF13439 Glycosyltransferase Family 4 L3i22_052460 PF00534 Glycosyl transferases group 1 L3i22_052460 PF13439 Glycosyltransferase Family 4 L3i22_052480 PF13302 Acetyltransferase (GNAT) domain L3i22_052500 PF07730 Histidine kinase L3i22_052510 PF00072 Response regulator receiver domain L3i22_052510 PF00196 Bacterial regulatory proteins, luxR family L3i22_052560 PF00857 Isochorismatase family L3i22_052590 PF01258 Prokaryotic dksA/traR C4-type zinc finger L3i22_052610 PF04820 Tryptophan halogenase L3i22_052620 PF00999 Sodium/hydrogen exchanger family L3i22_052630 PF00296 Luciferase-like monooxygenase L3i22_052640 PF00561 alpha/beta hydrolase fold L3i22_052650 PF00248 Aldo/keto reductase family L3i22_052670 PF00106 short chain dehydrogenase L3i22_052680 PF01565 FAD binding domain L3i22_052680 PF02913 FAD linked oxidases, C-terminal domain L3i22_052750 PF01661 Macro domain L3i22_052760 PF04616 Glycosyl hydrolases family 43 L3i22_052780 PF01584 CheW-like domain L3i22_052790 PF03705 CheR methyltransferase, all-alpha domain L3i22_052790 PF01739 CheR methyltransferase, SAM binding domain L3i22_052800 PF03975 CheD chemotactic sensory transduction L3i22_052810 PF00072 Response regulator receiver domain L3i22_052810 PF01339 CheB methylesterase L3i22_052820 PF00672 HAMP domain L3i22_052820 PF02743 Cache domain L3i22_052820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L3i22_052830 PF00072 Response regulator receiver domain L3i22_052850 PF02895 Signal transducing histidine kinase, homodimeric domain L3i22_052850 PF01627 Hpt domain L3i22_052850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_052850 PF09078 CheY binding L3i22_052850 PF01584 CheW-like domain L3i22_052860 PF00561 alpha/beta hydrolase fold L3i22_052880 PF00400 WD domain, G-beta repeat L3i22_052880 PF00069 Protein kinase domain L3i22_052910 PF01638 HxlR-like helix-turn-helix L3i22_052950 PF00106 short chain dehydrogenase L3i22_052960 PF01494 FAD binding domain L3i22_053050 PF02626 Carboxyltransferase domain, subdomain A and B L3i22_053060 PF02682 Carboxyltransferase domain, subdomain C and D L3i22_053070 PF00083 Sugar (and other) transporter L3i22_053120 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase L3i22_053140 PF00440 Bacterial regulatory proteins, tetR family L3i22_053140 PF16859 Tetracyclin repressor-like, C-terminal domain L3i22_053150 PF08448 PAS fold L3i22_053150 PF13188 PAS domain L3i22_053150 PF00072 Response regulator receiver domain L3i22_053150 PF00512 His Kinase A (phospho-acceptor) domain L3i22_053150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_053170 PF03704 Bacterial transcriptional activator domain L3i22_053170 PF00486 Transcriptional regulatory protein, C terminal L3i22_053170 PF00498 FHA domain L3i22_053220 PF00171 Aldehyde dehydrogenase family L3i22_053240 PF00202 Aminotransferase class-III L3i22_053250 PF03466 LysR substrate binding domain L3i22_053250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L3i22_053270 PF03707 Bacterial signalling protein N terminal repeat L3i22_053270 PF00990 Diguanylate cyclase, GGDEF domain L3i22_053270 PF00563 EAL domain L3i22_053280 PF00360 Phytochrome region L3i22_053280 PF01590 GAF domain L3i22_053280 PF00990 Diguanylate cyclase, GGDEF domain L3i22_053280 PF00563 EAL domain L3i22_053300 PF00005 ABC transporter L3i22_053300 PF02687 FtsX-like permease family L3i22_053300 PF12704 MacB-like periplasmic core domain L3i22_053310 PF00005 ABC transporter L3i22_053310 PF02687 FtsX-like permease family L3i22_053310 PF12704 MacB-like periplasmic core domain L3i22_053360 PF12833 Helix-turn-helix domain L3i22_053400 PF00553 Cellulose binding domain L3i22_053400 PF00150 Cellulase (glycosyl hydrolase family 5) L3i22_053410 PF00553 Cellulose binding domain L3i22_053410 PF00150 Cellulase (glycosyl hydrolase family 5) L3i22_053420 PF01494 FAD binding domain L3i22_053430 PF00753 Metallo-beta-lactamase superfamily L3i22_053440 PF00150 Cellulase (glycosyl hydrolase family 5) L3i22_053440 PF02013 Cellulose or protein binding domain L3i22_053500 PF00535 Glycosyl transferase family 2 L3i22_053540 PF01022 Bacterial regulatory protein, arsR family L3i22_053560 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain L3i22_053560 PF13378 Enolase C-terminal domain-like L3i22_053570 PF01557 Fumarylacetoacetate (FAA) hydrolase family L3i22_053590 PF00248 Aldo/keto reductase family L3i22_053600 PF07729 FCD domain L3i22_053600 PF00392 Bacterial regulatory proteins, gntR family L3i22_053650 PF05360 yiaA/B two helix domain L3i22_053670 PF01545 Cation efflux family L3i22_053670 PF16916 Dimerisation domain of Zinc Transporter L3i22_053680 PF01022 Bacterial regulatory protein, arsR family L3i22_053710 PF00356 Bacterial regulatory proteins, lacI family L3i22_053830 PF07690 Major Facilitator Superfamily L3i22_053850 PF04542 Sigma-70 region 2 L3i22_053850 PF08281 Sigma-70, region 4 L3i22_053880 PF04542 Sigma-70 region 2 L3i22_053880 PF08281 Sigma-70, region 4 L3i22_053900 PF07690 Major Facilitator Superfamily L3i22_053910 PF04542 Sigma-70 region 2 L3i22_053910 PF08281 Sigma-70, region 4 L3i22_053920 PF03795 YCII-related domain L3i22_053930 PF00591 Glycosyl transferase family, a/b domain L3i22_053930 PF02885 Glycosyl transferase family, helical bundle domain L3i22_053950 PF04545 Sigma-70, region 4 L3i22_053950 PF04542 Sigma-70 region 2 L3i22_054000 PF01575 MaoC like domain L3i22_054020 PF00005 ABC transporter L3i22_054020 PF02687 FtsX-like permease family L3i22_054020 PF12704 MacB-like periplasmic core domain L3i22_054030 PF05384 Sensor protein DegS L3i22_054030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_054030 PF07730 Histidine kinase L3i22_054040 PF00196 Bacterial regulatory proteins, luxR family L3i22_054040 PF00072 Response regulator receiver domain L3i22_054080 PF00561 alpha/beta hydrolase fold L3i22_054090 PF00106 short chain dehydrogenase L3i22_054100 PF03466 LysR substrate binding domain L3i22_054100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L3i22_054110 PF00144 Beta-lactamase L3i22_054140 PF13649 Methyltransferase domain L3i22_054210 PF02899 Phage integrase, N-terminal SAM-like domain L3i22_054210 PF00589 Phage integrase family L3i22_054230 PF00248 Aldo/keto reductase family L3i22_054280 PF03741 Integral membrane protein TerC family L3i22_054290 PF08361 MAATS-type transcriptional repressor, C-terminal region L3i22_054290 PF00440 Bacterial regulatory proteins, tetR family L3i22_054300 PF02803 Thiolase, C-terminal domain L3i22_054300 PF00108 Thiolase, N-terminal domain L3i22_054340 PF11838 ERAP1-like C-terminal domain L3i22_054340 PF01433 Peptidase family M1 domain L3i22_054380 PF01047 MarR family L3i22_054390 PF03466 LysR substrate binding domain L3i22_054390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L3i22_054400 PF00701 Dihydrodipicolinate synthetase family L3i22_054410 PF00486 Transcriptional regulatory protein, C terminal L3i22_054410 PF00931 NB-ARC domain L3i22_054410 PF03704 Bacterial transcriptional activator domain L3i22_054440 PF07732 Multicopper oxidase L3i22_054440 PF00394 Multicopper oxidase L3i22_054440 PF07731 Multicopper oxidase L3i22_054500 PF02861 Clp amino terminal domain, pathogenicity island component L3i22_054520 PF00005 ABC transporter L3i22_054540 PF07730 Histidine kinase L3i22_054540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_054550 PF00196 Bacterial regulatory proteins, luxR family L3i22_054550 PF00072 Response regulator receiver domain L3i22_054570 PF04539 Sigma-70 region 3 L3i22_054570 PF04542 Sigma-70 region 2 L3i22_054570 PF04545 Sigma-70, region 4 L3i22_054590 PF00155 Aminotransferase class I and II L3i22_054600 PF00005 ABC transporter L3i22_054610 PF02673 Bacitracin resistance protein BacA L3i22_054630 PF13847 Methyltransferase domain L3i22_054660 PF02899 Phage integrase, N-terminal SAM-like domain L3i22_054660 PF00589 Phage integrase family L3i22_054700 PF13649 Methyltransferase domain L3i22_054720 PF01636 Phosphotransferase enzyme family L3i22_054840 PF01037 Lrp/AsnC ligand binding domain L3i22_054850 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain L3i22_054850 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase L3i22_054900 PF00350 Dynamin family L3i22_054910 PF00350 Dynamin family L3i22_054930 PF11700 Vacuole effluxer Atg22 like L3i22_054950 PF00575 S1 RNA binding domain L3i22_055020 PF00893 Small Multidrug Resistance protein L3i22_055050 PF01047 MarR family L3i22_055050 PF00583 Acetyltransferase (GNAT) family L3i22_055060 PF13411 MerR HTH family regulatory protein L3i22_055090 PF02566 OsmC-like protein L3i22_055100 PF01047 MarR family L3i22_055130 PF01925 Sulfite exporter TauE/SafE L3i22_055140 PF03928 Haem-degrading L3i22_055170 PF00890 FAD binding domain L3i22_055190 PF06276 Ferric iron reductase FhuF-like transporter L3i22_055190 PF04183 IucA / IucC family L3i22_055200 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain L3i22_055200 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain L3i22_055240 PF05139 Erythromycin esterase L3i22_055260 PF00149 Calcineurin-like phosphoesterase L3i22_055290 PF12697 Alpha/beta hydrolase family L3i22_055340 PF00990 Diguanylate cyclase, GGDEF domain L3i22_055340 PF00563 EAL domain L3i22_055340 PF03707 Bacterial signalling protein N terminal repeat L3i22_055360 PF00196 Bacterial regulatory proteins, luxR family L3i22_055480 PF00248 Aldo/keto reductase family L3i22_055520 PF02463 RecF/RecN/SMC N terminal domain L3i22_055550 PF00248 Aldo/keto reductase family L3i22_055590 PF07726 ATPase family associated with various cellular activities (AAA) L3i22_055590 PF17863 AAA lid domain L3i22_055650 PF00440 Bacterial regulatory proteins, tetR family L3i22_055660 PF03781 Sulfatase-modifying factor enzyme 1 L3i22_055700 PF00144 Beta-lactamase L3i22_055720 PF12706 Beta-lactamase superfamily domain L3i22_055740 PF01327 Polypeptide deformylase L3i22_055760 PF08281 Sigma-70, region 4 L3i22_055760 PF04542 Sigma-70 region 2 L3i22_055770 PF04715 Anthranilate synthase component I, N terminal region L3i22_055770 PF00425 chorismate binding enzyme L3i22_055790 PF02347 Glycine cleavage system P-protein L3i22_055800 PF00248 Aldo/keto reductase family L3i22_055840 PF03691 Uncharacterised protein family (UPF0167) L3i22_055860 PF01494 FAD binding domain L3i22_055950 PF07690 Major Facilitator Superfamily L3i22_055970 PF03239 Iron permease FTR1 family L3i22_055980 PF13473 Cupredoxin-like domain L3i22_055980 PF09375 Imelysin L3i22_055990 PF04261 Dyp-type peroxidase family L3i22_055990 PF10518 TAT (twin-arginine translocation) pathway signal sequence L3i22_056040 PF00271 Helicase conserved C-terminal domain L3i22_056040 PF08148 DSHCT (NUC185) domain L3i22_056040 PF00270 DEAD/DEAH box helicase L3i22_056060 PF01494 FAD binding domain L3i22_056070 PF00440 Bacterial regulatory proteins, tetR family L3i22_056190 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain L3i22_056190 PF08531 Alpha-L-rhamnosidase N-terminal domain L3i22_056190 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain L3i22_056190 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain L3i22_056200 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_056210 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_056230 PF00356 Bacterial regulatory proteins, lacI family L3i22_056250 PF04542 Sigma-70 region 2 L3i22_056250 PF08281 Sigma-70, region 4 L3i22_056290 PF04101 Glycosyltransferase family 28 C-terminal domain L3i22_056310 PF00171 Aldehyde dehydrogenase family L3i22_056340 PF01638 HxlR-like helix-turn-helix L3i22_056350 PF13460 NAD(P)H-binding L3i22_056370 PF08240 Alcohol dehydrogenase GroES-like domain L3i22_056370 PF00107 Zinc-binding dehydrogenase L3i22_056460 PF10946 Protein of unknown function DUF2625 L3i22_056470 PF00196 Bacterial regulatory proteins, luxR family L3i22_056470 PF00072 Response regulator receiver domain L3i22_056480 PF07730 Histidine kinase L3i22_056510 PF03466 LysR substrate binding domain L3i22_056510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L3i22_056540 PF00171 Aldehyde dehydrogenase family L3i22_056550 PF01313 Bacterial export proteins, family 3 L3i22_056560 PF04075 F420H(2)-dependent quinone reductase L3i22_056570 PF00067 Cytochrome P450 L3i22_056590 PF03707 Bacterial signalling protein N terminal repeat L3i22_056590 PF00563 EAL domain L3i22_056590 PF00990 Diguanylate cyclase, GGDEF domain L3i22_056630 PF13193 AMP-binding enzyme C-terminal domain L3i22_056630 PF00501 AMP-binding enzyme L3i22_056660 PF14602 Hexapeptide repeat of succinyl-transferase L3i22_056670 PF00109 Beta-ketoacyl synthase, N-terminal domain L3i22_056670 PF14765 Polyketide synthase dehydratase L3i22_056670 PF08659 KR domain L3i22_056670 PF16197 Ketoacyl-synthetase C-terminal extension L3i22_056670 PF08240 Alcohol dehydrogenase GroES-like domain L3i22_056670 PF00698 Acyl transferase domain L3i22_056670 PF00550 Phosphopantetheine attachment site L3i22_056670 PF02801 Beta-ketoacyl synthase, C-terminal domain L3i22_056700 PF08241 Methyltransferase domain L3i22_056740 PF00440 Bacterial regulatory proteins, tetR family L3i22_056810 PF00512 His Kinase A (phospho-acceptor) domain L3i22_056810 PF00072 Response regulator receiver domain L3i22_056810 PF13188 PAS domain L3i22_056810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_056810 PF08448 PAS fold L3i22_056820 PF00583 Acetyltransferase (GNAT) family L3i22_056840 PF07228 Stage II sporulation protein E (SpoIIE) L3i22_056840 PF08448 PAS fold L3i22_056840 PF13581 Histidine kinase-like ATPase domain L3i22_056840 PF13466 STAS domain L3i22_056860 PF07690 Major Facilitator Superfamily L3i22_056910 PF07690 Major Facilitator Superfamily L3i22_056960 PF02311 AraC-like ligand binding domain L3i22_056960 PF12833 Helix-turn-helix domain L3i22_056970 PF00795 Carbon-nitrogen hydrolase L3i22_056980 PF07730 Histidine kinase L3i22_056990 PF00072 Response regulator receiver domain L3i22_056990 PF00196 Bacterial regulatory proteins, luxR family L3i22_057040 PF01494 FAD binding domain L3i22_057060 PF15975 Flotillin L3i22_057060 PF01145 SPFH domain / Band 7 family L3i22_057090 PF00069 Protein kinase domain L3i22_057090 PF03793 PASTA domain L3i22_057110 PF08281 Sigma-70, region 4 L3i22_057110 PF04542 Sigma-70 region 2 L3i22_057120 PF07584 Aerotolerance regulator N-terminal L3i22_057120 PF13519 von Willebrand factor type A domain L3i22_057130 PF03033 Glycosyltransferase family 28 N-terminal domain L3i22_057130 PF04101 Glycosyltransferase family 28 C-terminal domain L3i22_057150 PF01965 DJ-1/PfpI family L3i22_057180 PF07690 Major Facilitator Superfamily L3i22_057210 PF00248 Aldo/keto reductase family L3i22_057220 PF01638 HxlR-like helix-turn-helix L3i22_057250 PF00561 alpha/beta hydrolase fold L3i22_057250 PF00364 Biotin-requiring enzyme L3i22_057290 PF01522 Polysaccharide deacetylase L3i22_057290 PF00457 Glycosyl hydrolases family 11 L3i22_057300 PF01037 Lrp/AsnC ligand binding domain L3i22_057320 PF07730 Histidine kinase L3i22_057330 PF00196 Bacterial regulatory proteins, luxR family L3i22_057330 PF00072 Response regulator receiver domain L3i22_057340 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain L3i22_057370 PF07690 Major Facilitator Superfamily L3i22_057400 PF07690 Major Facilitator Superfamily L3i22_057420 PF01546 Peptidase family M20/M25/M40 L3i22_057420 PF07687 Peptidase dimerisation domain L3i22_057430 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily L3i22_057480 PF00128 Alpha amylase, catalytic domain L3i22_057480 PF02903 Alpha amylase, N-terminal ig-like domain L3i22_057480 PF16657 Maltogenic Amylase, C-terminal domain L3i22_057490 PF07992 Pyridine nucleotide-disulphide oxidoreductase L3i22_057490 PF14759 Reductase C-terminal L3i22_057500 PF00378 Enoyl-CoA hydratase/isomerase L3i22_057520 PF03551 Transcriptional regulator PadR-like family L3i22_057520 PF10400 Virulence activator alpha C-term L3i22_057530 PF00378 Enoyl-CoA hydratase/isomerase L3i22_057540 PF07992 Pyridine nucleotide-disulphide oxidoreductase L3i22_057540 PF00724 NADH:flavin oxidoreductase / NADH oxidase family L3i22_057550 PF00440 Bacterial regulatory proteins, tetR family L3i22_057560 PF00248 Aldo/keto reductase family L3i22_057570 PF07859 alpha/beta hydrolase fold L3i22_057600 PF00106 short chain dehydrogenase L3i22_057610 PF03313 Serine dehydratase alpha chain L3i22_057610 PF03315 Serine dehydratase beta chain L3i22_057620 PF08669 Glycine cleavage T-protein C-terminal barrel domain L3i22_057620 PF01571 Aminomethyltransferase folate-binding domain L3i22_057680 PF00512 His Kinase A (phospho-acceptor) domain L3i22_057680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_057680 PF00672 HAMP domain L3i22_057690 PF00486 Transcriptional regulatory protein, C terminal L3i22_057690 PF00072 Response regulator receiver domain L3i22_057710 PF02687 FtsX-like permease family L3i22_057710 PF12704 MacB-like periplasmic core domain L3i22_057710 PF00005 ABC transporter L3i22_057730 PF07694 5TMR of 5TMR-LYT L3i22_057730 PF00990 Diguanylate cyclase, GGDEF domain L3i22_057750 PF01494 FAD binding domain L3i22_057760 PF00440 Bacterial regulatory proteins, tetR family L3i22_057760 PF17926 Tetracyclin repressor-like, C-terminal domain L3i22_057780 PF01494 FAD binding domain L3i22_057790 PF13180 PDZ domain L3i22_057800 PF00557 Metallopeptidase family M24 L3i22_057820 PF00459 Inositol monophosphatase family L3i22_057870 PF01494 FAD binding domain L3i22_057880 PF02909 Tetracyclin repressor-like, C-terminal domain L3i22_057880 PF00440 Bacterial regulatory proteins, tetR family L3i22_057950 PF00196 Bacterial regulatory proteins, luxR family L3i22_057950 PF00072 Response regulator receiver domain L3i22_057980 PF00350 Dynamin family L3i22_057990 PF00350 Dynamin family L3i22_058010 PF00196 Bacterial regulatory proteins, luxR family L3i22_058030 PF00196 Bacterial regulatory proteins, luxR family L3i22_058030 PF00072 Response regulator receiver domain L3i22_058040 PF00171 Aldehyde dehydrogenase family L3i22_058050 PF08240 Alcohol dehydrogenase GroES-like domain L3i22_058050 PF00107 Zinc-binding dehydrogenase L3i22_058060 PF01266 FAD dependent oxidoreductase L3i22_058070 PF00171 Aldehyde dehydrogenase family L3i22_058090 PF07730 Histidine kinase L3i22_058100 PF03176 MMPL family L3i22_058130 PF00005 ABC transporter L3i22_058150 PF07730 Histidine kinase L3i22_058160 PF00072 Response regulator receiver domain L3i22_058160 PF00196 Bacterial regulatory proteins, luxR family L3i22_058210 PF04545 Sigma-70, region 4 L3i22_058210 PF04539 Sigma-70 region 3 L3i22_058210 PF04542 Sigma-70 region 2 L3i22_058250 PF01042 Endoribonuclease L-PSP L3i22_058270 PF05199 GMC oxidoreductase L3i22_058270 PF00732 GMC oxidoreductase L3i22_058280 PF00171 Aldehyde dehydrogenase family L3i22_058290 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin L3i22_058300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L3i22_058300 PF03466 LysR substrate binding domain L3i22_058320 PF07969 Amidohydrolase family L3i22_058330 PF13520 Amino acid permease L3i22_058340 PF02728 Copper amine oxidase, N3 domain L3i22_058340 PF01179 Copper amine oxidase, enzyme domain L3i22_058350 PF00440 Bacterial regulatory proteins, tetR family L3i22_058350 PF13305 Tetracyclin repressor-like, C-terminal domain L3i22_058400 PF10996 Beta-Casp domain L3i22_058400 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain L3i22_058400 PF00753 Metallo-beta-lactamase superfamily L3i22_058420 PF07971 Glycosyl hydrolase family 92 L3i22_058420 PF17678 Glycosyl hydrolase family 92 N-terminal domain L3i22_058470 PF00232 Glycosyl hydrolase family 1 L3i22_058480 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_058490 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_058510 PF00356 Bacterial regulatory proteins, lacI family L3i22_058550 PF00313 'Cold-shock' DNA-binding domain L3i22_058580 PF08361 MAATS-type transcriptional repressor, C-terminal region L3i22_058580 PF00440 Bacterial regulatory proteins, tetR family L3i22_058620 PF17676 LD-carboxypeptidase C-terminal domain L3i22_058620 PF02016 LD-carboxypeptidase N-terminal domain L3i22_058640 PF04542 Sigma-70 region 2 L3i22_058640 PF08281 Sigma-70, region 4 L3i22_058640 PF12680 SnoaL-like domain L3i22_058680 PF09924 Uncharacterised conserved protein (DUF2156) L3i22_058680 PF00152 tRNA synthetases class II (D, K and N) L3i22_058680 PF16995 Transmembrane region of lysyl-tRNA synthetase L3i22_058680 PF01336 OB-fold nucleic acid binding domain L3i22_058690 PF08279 HTH domain L3i22_058690 PF13280 WYL domain L3i22_058720 PF03466 LysR substrate binding domain L3i22_058720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L3i22_058750 PF00175 Oxidoreductase NAD-binding domain L3i22_058750 PF00111 2Fe-2S iron-sulfur cluster binding domain L3i22_058750 PF00970 Oxidoreductase FAD-binding domain L3i22_058760 PF00440 Bacterial regulatory proteins, tetR family L3i22_058760 PF02909 Tetracyclin repressor-like, C-terminal domain L3i22_058790 PF02190 ATP-dependent protease La (LON) substrate-binding domain L3i22_058790 PF00004 ATPase family associated with various cellular activities (AAA) L3i22_058790 PF05362 Lon protease (S16) C-terminal proteolytic domain L3i22_058820 PF03061 Thioesterase superfamily L3i22_058830 PF14535 AMP-binding enzyme C-terminal domain L3i22_058830 PF00501 AMP-binding enzyme L3i22_058910 PF14535 AMP-binding enzyme C-terminal domain L3i22_058910 PF00501 AMP-binding enzyme L3i22_058930 PF07992 Pyridine nucleotide-disulphide oxidoreductase L3i22_058940 PF00072 Response regulator receiver domain L3i22_058940 PF00196 Bacterial regulatory proteins, luxR family L3i22_058950 PF07730 Histidine kinase L3i22_058960 PF00394 Multicopper oxidase L3i22_058960 PF07731 Multicopper oxidase L3i22_058960 PF07732 Multicopper oxidase L3i22_058970 PF00400 WD domain, G-beta repeat L3i22_058970 PF00069 Protein kinase domain L3i22_058990 PF03734 L,D-transpeptidase catalytic domain L3i22_058990 PF17964 Bacterial Ig domain L3i22_059010 PF01433 Peptidase family M1 domain L3i22_059010 PF11838 ERAP1-like C-terminal domain L3i22_059020 PF00501 AMP-binding enzyme L3i22_059020 PF13193 AMP-binding enzyme C-terminal domain L3i22_059020 PF00668 Condensation domain L3i22_059020 PF00550 Phosphopantetheine attachment site L3i22_059020 PF07993 Male sterility protein L3i22_059030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L3i22_059050 PF18698 Histidine kinase sensor domain L3i22_059050 PF00512 His Kinase A (phospho-acceptor) domain L3i22_059050 PF00672 HAMP domain L3i22_059050 PF00989 PAS fold L3i22_059050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_059080 PF01255 Putative undecaprenyl diphosphate synthase L3i22_059110 PF01494 FAD binding domain L3i22_059120 PF00440 Bacterial regulatory proteins, tetR family L3i22_059130 PF01636 Phosphotransferase enzyme family L3i22_059140 PF00356 Bacterial regulatory proteins, lacI family L3i22_059160 PF16874 Glycosyl hydrolase family 36 C-terminal domain L3i22_059160 PF16875 Glycosyl hydrolase family 36 N-terminal domain L3i22_059180 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_059190 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_059210 PF13191 AAA ATPase domain L3i22_059210 PF00211 Adenylate and Guanylate cyclase catalytic domain L3i22_059220 PF00196 Bacterial regulatory proteins, luxR family L3i22_059270 PF00563 EAL domain L3i22_059270 PF03707 Bacterial signalling protein N terminal repeat L3i22_059270 PF00990 Diguanylate cyclase, GGDEF domain L3i22_059320 PF03466 LysR substrate binding domain L3i22_059320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L3i22_059330 PF00067 Cytochrome P450 L3i22_059340 PF08241 Methyltransferase domain L3i22_059400 PF00704 Glycosyl hydrolases family 18 L3i22_059400 PF02018 Carbohydrate binding domain L3i22_059400 PF00041 Fibronectin type III domain L3i22_059420 PF03475 3-alpha domain L3i22_059420 PF03473 MOSC domain L3i22_059450 PF03211 Pectate lyase L3i22_059460 PF01425 Amidase L3i22_059470 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain L3i22_059470 PF02785 Biotin carboxylase C-terminal domain L3i22_059470 PF00289 Biotin carboxylase, N-terminal domain L3i22_059470 PF18140 Propionyl-coenzyme A carboxylase BT domain L3i22_059470 PF00364 Biotin-requiring enzyme L3i22_059510 PF00440 Bacterial regulatory proteins, tetR family L3i22_059510 PF17932 Tetracyclin repressor-like, C-terminal domain L3i22_059540 PF00491 Arginase family L3i22_059560 PF00248 Aldo/keto reductase family L3i22_059570 PF01594 AI-2E family transporter L3i22_059610 PF03707 Bacterial signalling protein N terminal repeat L3i22_059610 PF00990 Diguanylate cyclase, GGDEF domain L3i22_059610 PF00563 EAL domain L3i22_059620 PF08264 Anticodon-binding domain of tRNA L3i22_059620 PF09334 tRNA synthetases class I (M) L3i22_059620 PF01588 Putative tRNA binding domain L3i22_059650 PF04545 Sigma-70, region 4 L3i22_059650 PF04542 Sigma-70 region 2 L3i22_059680 PF00069 Protein kinase domain L3i22_059710 PF01063 Amino-transferase class IV L3i22_059750 PF08240 Alcohol dehydrogenase GroES-like domain L3i22_059750 PF00107 Zinc-binding dehydrogenase L3i22_059780 PF00005 ABC transporter L3i22_059790 PF00072 Response regulator receiver domain L3i22_059790 PF00486 Transcriptional regulatory protein, C terminal L3i22_059800 PF00512 His Kinase A (phospho-acceptor) domain L3i22_059800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_059800 PF00672 HAMP domain L3i22_059840 PF00589 Phage integrase family L3i22_059840 PF02899 Phage integrase, N-terminal SAM-like domain L3i22_059940 PF00746 LPXTG cell wall anchor motif L3i22_059960 PF17782 DprA winged helix domain L3i22_059960 PF02481 DNA recombination-mediator protein A L3i22_060150 PF00437 Type II/IV secretion system protein L3i22_060310 PF00486 Transcriptional regulatory protein, C terminal L3i22_060310 PF00072 Response regulator receiver domain L3i22_060320 PF00672 HAMP domain L3i22_060320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_060320 PF00512 His Kinase A (phospho-acceptor) domain L3i22_060390 PF02796 Helix-turn-helix domain of resolvase L3i22_060390 PF00239 Resolvase, N terminal domain L3i22_060500 PF00589 Phage integrase family L3i22_060500 PF02899 Phage integrase, N-terminal SAM-like domain L3i22_060590 PF13361 UvrD-like helicase C-terminal domain L3i22_060590 PF00580 UvrD/REP helicase N-terminal domain L3i22_060590 PF12462 DNA helicase IV / RNA helicase N terminal L3i22_060710 PF10410 DnaB-helicase binding domain of primase L3i22_060710 PF08278 DNA primase DnaG DnaB-binding L3i22_060710 PF13662 Toprim domain L3i22_060710 PF08275 DNA primase catalytic core, N-terminal domain L3i22_060710 PF01807 CHC2 zinc finger L3i22_060900 PF00011 Hsp20/alpha crystallin family L3i22_061090 PF11774 Lsr2 L3i22_061110 PF02371 Transposase IS116/IS110/IS902 family L3i22_061110 PF01548 Transposase L3i22_061260 PF01636 Phosphotransferase enzyme family L3i22_061280 PF03819 MazG nucleotide pyrophosphohydrolase domain L3i22_061310 PF00664 ABC transporter transmembrane region L3i22_061310 PF00005 ABC transporter L3i22_061340 PF00476 DNA polymerase family A L3i22_061340 PF09281 Taq polymerase, exonuclease L3i22_061340 PF01367 5'-3' exonuclease, C-terminal SAM fold L3i22_061340 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain L3i22_061350 PF00534 Glycosyl transferases group 1 L3i22_061350 PF13439 Glycosyltransferase Family 4 L3i22_061370 PF04055 Radical SAM superfamily L3i22_061370 PF06463 Molybdenum Cofactor Synthesis C L3i22_061380 PF00535 Glycosyl transferase family 2 L3i22_061380 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 L3i22_061420 PF04055 Radical SAM superfamily L3i22_061430 PF01242 6-pyruvoyl tetrahydropterin synthase L3i22_061440 PF06508 Queuosine biosynthesis protein QueC L3i22_061460 PF17763 Glutaminase/Asparaginase C-terminal domain L3i22_061460 PF00710 Asparaginase, N-terminal L3i22_061560 PF02223 Thymidylate kinase L3i22_061750 PF13340 Putative transposase of IS4/5 family (DUF4096) L3i22_061880 PF00589 Phage integrase family L3i22_061880 PF02899 Phage integrase, N-terminal SAM-like domain L3i22_061920 PF13340 Putative transposase of IS4/5 family (DUF4096) L3i22_061950 PF01548 Transposase L3i22_061950 PF02371 Transposase IS116/IS110/IS902 family L3i22_061990 PF00293 NUDIX domain L3i22_062060 PF00563 EAL domain L3i22_062060 PF00990 Diguanylate cyclase, GGDEF domain L3i22_062060 PF00360 Phytochrome region L3i22_062060 PF01590 GAF domain L3i22_062090 PF00589 Phage integrase family L3i22_062090 PF02899 Phage integrase, N-terminal SAM-like domain L3i22_062220 PF00589 Phage integrase family L3i22_062220 PF02899 Phage integrase, N-terminal SAM-like domain L3i22_062290 PF00296 Luciferase-like monooxygenase L3i22_062340 PF01447 Thermolysin metallopeptidase, catalytic domain L3i22_062340 PF02868 Thermolysin metallopeptidase, alpha-helical domain L3i22_062340 PF16485 Protealysin propeptide L3i22_062400 PF17678 Glycosyl hydrolase family 92 N-terminal domain L3i22_062400 PF07971 Glycosyl hydrolase family 92 L3i22_062410 PF12833 Helix-turn-helix domain L3i22_062410 PF00072 Response regulator receiver domain L3i22_062430 PF12704 MacB-like periplasmic core domain L3i22_062430 PF02687 FtsX-like permease family L3i22_062430 PF00005 ABC transporter L3i22_062450 PF04542 Sigma-70 region 2 L3i22_062450 PF04539 Sigma-70 region 3 L3i22_062450 PF04545 Sigma-70, region 4 L3i22_062460 PF01739 CheR methyltransferase, SAM binding domain L3i22_062460 PF08448 PAS fold L3i22_062460 PF03705 CheR methyltransferase, all-alpha domain L3i22_062460 PF01339 CheB methylesterase L3i22_062470 PF00072 Response regulator receiver domain L3i22_062470 PF01339 CheB methylesterase L3i22_062520 PF03060 Nitronate monooxygenase L3i22_062550 PF00990 Diguanylate cyclase, GGDEF domain L3i22_062550 PF13188 PAS domain L3i22_062550 PF03707 Bacterial signalling protein N terminal repeat L3i22_062550 PF00563 EAL domain L3i22_062580 PF02696 Uncharacterized ACR, YdiU/UPF0061 family L3i22_062600 PF02469 Fasciclin domain L3i22_062620 PF04545 Sigma-70, region 4 L3i22_062620 PF04542 Sigma-70 region 2 L3i22_062660 PF02733 Dak1 domain L3i22_062670 PF02734 DAK2 domain L3i22_062680 PF13419 Haloacid dehalogenase-like hydrolase L3i22_062690 PF01116 Fructose-bisphosphate aldolase class-II L3i22_062700 PF00196 Bacterial regulatory proteins, luxR family L3i22_062700 PF00072 Response regulator receiver domain L3i22_062710 PF03033 Glycosyltransferase family 28 N-terminal domain L3i22_062720 PF13538 UvrD-like helicase C-terminal domain L3i22_062750 PF00005 ABC transporter L3i22_062760 PF00005 ABC transporter L3i22_062760 PF12704 MacB-like periplasmic core domain L3i22_062760 PF02687 FtsX-like permease family L3i22_062790 PF00009 Elongation factor Tu GTP binding domain L3i22_062790 PF03764 Elongation factor G, domain IV L3i22_062790 PF00679 Elongation factor G C-terminus L3i22_062800 PF04616 Glycosyl hydrolases family 43 L3i22_062830 PF04226 Transglycosylase associated protein L3i22_062860 PF03069 Acetamidase/Formamidase family L3i22_062870 PF13520 Amino acid permease L3i22_062890 PF13581 Histidine kinase-like ATPase domain L3i22_062890 PF08448 PAS fold L3i22_062890 PF07228 Stage II sporulation protein E (SpoIIE) L3i22_062890 PF13466 STAS domain L3i22_062900 PF00196 Bacterial regulatory proteins, luxR family L3i22_062910 PF00072 Response regulator receiver domain L3i22_062910 PF00196 Bacterial regulatory proteins, luxR family L3i22_062920 PF04231 Endonuclease I L3i22_062930 PF13472 GDSL-like Lipase/Acylhydrolase family L3i22_062990 PF01527 Transposase L3i22_063000 PF13276 HTH-like domain L3i22_063000 PF13333 Integrase core domain L3i22_063000 PF00665 Integrase core domain L3i22_063010 PF00732 GMC oxidoreductase L3i22_063010 PF05199 GMC oxidoreductase L3i22_063040 PF00440 Bacterial regulatory proteins, tetR family L3i22_063050 PF00106 short chain dehydrogenase L3i22_063100 PF02540 NAD synthase L3i22_063110 PF00731 AIR carboxylase L3i22_063120 PF01969 Protein of unknown function DUF111 L3i22_063130 PF01734 Patatin-like phospholipase L3i22_063140 PF07859 alpha/beta hydrolase fold L3i22_063170 PF00561 alpha/beta hydrolase fold L3i22_063180 PF01053 Cys/Met metabolism PLP-dependent enzyme L3i22_063210 PF00990 Diguanylate cyclase, GGDEF domain L3i22_063210 PF03707 Bacterial signalling protein N terminal repeat L3i22_063210 PF13188 PAS domain L3i22_063210 PF00563 EAL domain L3i22_063240 PF04261 Dyp-type peroxidase family L3i22_063260 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) L3i22_063260 PF05425 Copper resistance protein D L3i22_063330 PF02801 Beta-ketoacyl synthase, C-terminal domain L3i22_063330 PF14765 Polyketide synthase dehydratase L3i22_063330 PF00550 Phosphopantetheine attachment site L3i22_063330 PF00698 Acyl transferase domain L3i22_063330 PF08240 Alcohol dehydrogenase GroES-like domain L3i22_063330 PF16197 Ketoacyl-synthetase C-terminal extension L3i22_063330 PF00109 Beta-ketoacyl synthase, N-terminal domain L3i22_063330 PF08659 KR domain L3i22_063350 PF17938 Tetracyclin repressor-like, C-terminal domain L3i22_063350 PF00440 Bacterial regulatory proteins, tetR family L3i22_063360 PF00005 ABC transporter L3i22_063370 PF12399 Branched-chain amino acid ATP-binding cassette transporter L3i22_063370 PF00005 ABC transporter L3i22_063380 PF02653 Branched-chain amino acid transport system / permease component L3i22_063390 PF13458 Periplasmic binding protein L3i22_063400 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain L3i22_063400 PF00205 Thiamine pyrophosphate enzyme, central domain L3i22_063400 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain L3i22_063410 PF00171 Aldehyde dehydrogenase family L3i22_063420 PF01614 Bacterial transcriptional regulator L3i22_063420 PF09339 IclR helix-turn-helix domain L3i22_063430 PF02515 CoA-transferase family III L3i22_063440 PF08501 Shikimate dehydrogenase substrate binding domain L3i22_063440 PF18317 Shikimate 5'-dehydrogenase C-terminal domain L3i22_063450 PF12706 Beta-lactamase superfamily domain L3i22_063460 PF04055 Radical SAM superfamily L3i22_063460 PF13186 Iron-sulfur cluster-binding domain L3i22_063470 PF03070 TENA/THI-4/PQQC family L3i22_063480 PF13442 Cytochrome C oxidase, cbb3-type, subunit III L3i22_063480 PF13360 PQQ-like domain L3i22_063510 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily L3i22_063510 PF01261 Xylose isomerase-like TIM barrel L3i22_063530 PF04231 Endonuclease I L3i22_063540 PF00378 Enoyl-CoA hydratase/isomerase L3i22_063560 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain L3i22_063560 PF02129 X-Pro dipeptidyl-peptidase (S15 family) L3i22_063580 PF00356 Bacterial regulatory proteins, lacI family L3i22_063600 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_063610 PF00005 ABC transporter L3i22_063610 PF09383 NIL domain L3i22_063620 PF03180 NLPA lipoprotein L3i22_063640 PF00106 short chain dehydrogenase L3i22_063650 PF16658 Class II release factor RF3, C-terminal domain L3i22_063650 PF00009 Elongation factor Tu GTP binding domain L3i22_063660 PF07992 Pyridine nucleotide-disulphide oxidoreductase L3i22_063670 PF10503 Esterase PHB depolymerase L3i22_063690 PF08281 Sigma-70, region 4 L3i22_063690 PF04542 Sigma-70 region 2 L3i22_063690 PF12680 SnoaL-like domain L3i22_063710 PF03109 ABC1 family L3i22_063730 PF03358 NADPH-dependent FMN reductase L3i22_063740 PF00561 alpha/beta hydrolase fold L3i22_063770 PF01266 FAD dependent oxidoreductase L3i22_063770 PF16350 FAD dependent oxidoreductase central domain L3i22_063770 PF01571 Aminomethyltransferase folate-binding domain L3i22_063770 PF08669 Glycine cleavage T-protein C-terminal barrel domain L3i22_063780 PF07063 Domain of unknown function (DUF1338) L3i22_063790 PF00171 Aldehyde dehydrogenase family L3i22_063820 PF00440 Bacterial regulatory proteins, tetR family L3i22_063830 PF09995 Uncharacterized protein conserved in bacteria (DUF2236) L3i22_063840 PF04542 Sigma-70 region 2 L3i22_063840 PF08281 Sigma-70, region 4 L3i22_063850 PF03795 YCII-related domain L3i22_063860 PF01243 Pyridoxamine 5'-phosphate oxidase L3i22_063860 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region L3i22_063870 PF04029 2-phosphosulpholactate phosphatase L3i22_063890 PF03466 LysR substrate binding domain L3i22_063890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L3i22_063930 PF01408 Oxidoreductase family, NAD-binding Rossmann fold L3i22_063930 PF02894 Oxidoreductase family, C-terminal alpha/beta domain L3i22_063940 PF00459 Inositol monophosphatase family L3i22_063950 PF16736 Single Cache-like L3i22_063950 PF00989 PAS fold L3i22_063950 PF00512 His Kinase A (phospho-acceptor) domain L3i22_063950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_063960 PF00486 Transcriptional regulatory protein, C terminal L3i22_063960 PF00072 Response regulator receiver domain L3i22_064010 PF00535 Glycosyl transferase family 2 L3i22_064020 PF16363 GDP-mannose 4,6 dehydratase L3i22_064040 PF07859 alpha/beta hydrolase fold L3i22_064090 PF07350 Protein of unknown function (DUF1479) L3i22_064100 PF00196 Bacterial regulatory proteins, luxR family L3i22_064120 PF13460 NAD(P)H-binding L3i22_064130 PF01638 HxlR-like helix-turn-helix L3i22_064150 PF07690 Major Facilitator Superfamily L3i22_064160 PF02909 Tetracyclin repressor-like, C-terminal domain L3i22_064160 PF00440 Bacterial regulatory proteins, tetR family L3i22_064180 PF02653 Branched-chain amino acid transport system / permease component L3i22_064190 PF02653 Branched-chain amino acid transport system / permease component L3i22_064200 PF00005 ABC transporter L3i22_064210 PF13407 Periplasmic binding protein domain L3i22_064230 PF00106 short chain dehydrogenase L3i22_064240 PF00171 Aldehyde dehydrogenase family L3i22_064280 PF00557 Metallopeptidase family M24 L3i22_064280 PF01321 Creatinase/Prolidase N-terminal domain L3i22_064290 PF07690 Major Facilitator Superfamily L3i22_064330 PF13520 Amino acid permease L3i22_064350 PF07687 Peptidase dimerisation domain L3i22_064350 PF01546 Peptidase family M20/M25/M40 L3i22_064440 PF00781 Diacylglycerol kinase catalytic domain L3i22_064490 PF07690 Major Facilitator Superfamily L3i22_064530 PF00696 Amino acid kinase family L3i22_064540 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain L3i22_064540 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain L3i22_064560 PF13520 Amino acid permease L3i22_064600 PF00072 Response regulator receiver domain L3i22_064600 PF00196 Bacterial regulatory proteins, luxR family L3i22_064620 PF00196 Bacterial regulatory proteins, luxR family L3i22_064620 PF00072 Response regulator receiver domain L3i22_064630 PF11896 Domain of unknown function (DUF3416) L3i22_064630 PF00128 Alpha amylase, catalytic domain L3i22_064650 PF00916 Sulfate permease family L3i22_064650 PF01740 STAS domain L3i22_064690 PF01594 AI-2E family transporter L3i22_064780 PF00690 Cation transporter/ATPase, N-terminus L3i22_064780 PF00689 Cation transporting ATPase, C-terminus L3i22_064840 PF01022 Bacterial regulatory protein, arsR family L3i22_064870 PF16295 Tetracyclin repressor-like, C-terminal domain L3i22_064870 PF00440 Bacterial regulatory proteins, tetR family L3i22_064960 PF13378 Enolase C-terminal domain-like L3i22_064960 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain L3i22_064970 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_064980 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_064990 PF01547 Bacterial extracellular solute-binding protein L3i22_065010 PF16363 GDP-mannose 4,6 dehydratase L3i22_065020 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase L3i22_065020 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase L3i22_065030 PF03328 HpcH/HpaI aldolase/citrate lyase family L3i22_065080 PF00196 Bacterial regulatory proteins, luxR family L3i22_065080 PF00072 Response regulator receiver domain L3i22_065090 PF07730 Histidine kinase L3i22_065160 PF07992 Pyridine nucleotide-disulphide oxidoreductase L3i22_065160 PF14759 Reductase C-terminal L3i22_065180 PF00067 Cytochrome P450 L3i22_065190 PF00072 Response regulator receiver domain L3i22_065190 PF00486 Transcriptional regulatory protein, C terminal L3i22_065200 PF13439 Glycosyltransferase Family 4 L3i22_065220 PF00781 Diacylglycerol kinase catalytic domain L3i22_065220 PF02142 MGS-like domain L3i22_065250 PF10566 Glycoside hydrolase 97 L3i22_065250 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation L3i22_065250 PF14508 Glycosyl-hydrolase 97 N-terminal L3i22_065260 PF00657 GDSL-like Lipase/Acylhydrolase L3i22_065260 PF00404 Dockerin type I domain L3i22_065280 PF00196 Bacterial regulatory proteins, luxR family L3i22_065280 PF00072 Response regulator receiver domain L3i22_065330 PF00578 AhpC/TSA family L3i22_065340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L3i22_065340 PF03466 LysR substrate binding domain L3i22_065350 PF00144 Beta-lactamase L3i22_065370 PF03167 Uracil DNA glycosylase superfamily L3i22_065400 PF00152 tRNA synthetases class II (D, K and N) L3i22_065400 PF16995 Transmembrane region of lysyl-tRNA synthetase L3i22_065400 PF01336 OB-fold nucleic acid binding domain L3i22_065400 PF09924 Uncharacterised conserved protein (DUF2156) L3i22_065450 PF00962 Adenosine/AMP deaminase L3i22_065480 PF03466 LysR substrate binding domain L3i22_065480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L3i22_065490 PF13460 NAD(P)H-binding L3i22_065500 PF03928 Haem-degrading L3i22_065510 PF07690 Major Facilitator Superfamily L3i22_065550 PF12697 Alpha/beta hydrolase family L3i22_065560 PF04402 Protein of unknown function (DUF541) L3i22_065570 PF00512 His Kinase A (phospho-acceptor) domain L3i22_065570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_065570 PF00672 HAMP domain L3i22_065580 PF00072 Response regulator receiver domain L3i22_065580 PF00486 Transcriptional regulatory protein, C terminal L3i22_065590 PF03707 Bacterial signalling protein N terminal repeat L3i22_065590 PF00990 Diguanylate cyclase, GGDEF domain L3i22_065590 PF00563 EAL domain L3i22_065640 PF00135 Carboxylesterase family L3i22_065700 PF00005 ABC transporter L3i22_065740 PF00140 Sigma-70 factor, region 1.2 L3i22_065740 PF04542 Sigma-70 region 2 L3i22_065740 PF04539 Sigma-70 region 3 L3i22_065740 PF04545 Sigma-70, region 4 L3i22_065760 PF00551 Formyl transferase L3i22_065760 PF01842 ACT domain L3i22_065770 PF02219 Methylenetetrahydrofolate reductase L3i22_065780 PF01571 Aminomethyltransferase folate-binding domain L3i22_065790 PF00356 Bacterial regulatory proteins, lacI family L3i22_065840 PF07992 Pyridine nucleotide-disulphide oxidoreductase L3i22_065840 PF00403 Heavy-metal-associated domain L3i22_065840 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain L3i22_065870 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle L3i22_065880 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L3i22_065880 PF00005 ABC transporter L3i22_065890 PF12911 N-terminal TM domain of oligopeptide transport permease C L3i22_065890 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_065900 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_065910 PF00990 Diguanylate cyclase, GGDEF domain L3i22_065920 PF01047 MarR family L3i22_065930 PF07690 Major Facilitator Superfamily L3i22_065940 PF00398 Ribosomal RNA adenine dimethylase L3i22_065950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_065950 PF07730 Histidine kinase L3i22_065960 PF00072 Response regulator receiver domain L3i22_065960 PF00196 Bacterial regulatory proteins, luxR family L3i22_066000 PF07694 5TMR of 5TMR-LYT L3i22_066000 PF00990 Diguanylate cyclase, GGDEF domain L3i22_066020 PF01032 FecCD transport family L3i22_066030 PF01032 FecCD transport family L3i22_066050 PF01497 Periplasmic binding protein L3i22_066060 PF00501 AMP-binding enzyme L3i22_066060 PF13193 AMP-binding enzyme C-terminal domain L3i22_066060 PF00668 Condensation domain L3i22_066060 PF00550 Phosphopantetheine attachment site L3i22_066060 PF07993 Male sterility protein L3i22_066090 PF13193 AMP-binding enzyme C-terminal domain L3i22_066090 PF00501 AMP-binding enzyme L3i22_066100 PF00550 Phosphopantetheine attachment site L3i22_066100 PF00668 Condensation domain L3i22_066100 PF00975 Thioesterase domain L3i22_066100 PF00501 AMP-binding enzyme L3i22_066100 PF13193 AMP-binding enzyme C-terminal domain L3i22_066110 PF00550 Phosphopantetheine attachment site L3i22_066110 PF13193 AMP-binding enzyme C-terminal domain L3i22_066110 PF00975 Thioesterase domain L3i22_066110 PF00668 Condensation domain L3i22_066110 PF00501 AMP-binding enzyme L3i22_066120 PF00425 chorismate binding enzyme L3i22_066130 PF03621 MbtH-like protein L3i22_066140 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) L3i22_066160 PF01435 Peptidase family M48 L3i22_066200 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_066210 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_066240 PF00356 Bacterial regulatory proteins, lacI family L3i22_066260 PF00005 ABC transporter L3i22_066320 PF00512 His Kinase A (phospho-acceptor) domain L3i22_066320 PF00672 HAMP domain L3i22_066320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_066350 PF00005 ABC transporter L3i22_066350 PF02687 FtsX-like permease family L3i22_066350 PF12704 MacB-like periplasmic core domain L3i22_066380 PF00196 Bacterial regulatory proteins, luxR family L3i22_066380 PF00072 Response regulator receiver domain L3i22_066390 PF07730 Histidine kinase L3i22_066390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_066390 PF05384 Sensor protein DegS L3i22_066420 PF12704 MacB-like periplasmic core domain L3i22_066420 PF02687 FtsX-like permease family L3i22_066420 PF00005 ABC transporter L3i22_066430 PF00005 ABC transporter L3i22_066430 PF02687 FtsX-like permease family L3i22_066430 PF12704 MacB-like periplasmic core domain L3i22_066480 PF00005 ABC transporter L3i22_066490 PF07730 Histidine kinase L3i22_066490 PF05231 MASE1 L3i22_066490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_066500 PF00196 Bacterial regulatory proteins, luxR family L3i22_066500 PF00072 Response regulator receiver domain L3i22_066530 PF00005 ABC transporter L3i22_066560 PF00005 ABC transporter L3i22_066570 PF00005 ABC transporter L3i22_066590 PF00512 His Kinase A (phospho-acceptor) domain L3i22_066590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_066600 PF00072 Response regulator receiver domain L3i22_066600 PF00486 Transcriptional regulatory protein, C terminal L3i22_066630 PF00005 ABC transporter L3i22_066650 PF09335 SNARE associated Golgi protein L3i22_066690 PF09375 Imelysin L3i22_066690 PF13473 Cupredoxin-like domain L3i22_066700 PF02673 Bacitracin resistance protein BacA L3i22_066710 PF01494 FAD binding domain L3i22_066730 PF03781 Sulfatase-modifying factor enzyme 1 L3i22_066830 PF04030 D-arabinono-1,4-lactone oxidase L3i22_066830 PF01565 FAD binding domain L3i22_066840 PF00106 short chain dehydrogenase L3i22_066870 PF01040 UbiA prenyltransferase family L3i22_066880 PF00486 Transcriptional regulatory protein, C terminal L3i22_066880 PF00072 Response regulator receiver domain L3i22_066920 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region L3i22_066920 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit L3i22_066920 PF10531 SLBB domain L3i22_066940 PF00672 HAMP domain L3i22_066940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_066940 PF00512 His Kinase A (phospho-acceptor) domain L3i22_066950 PF00072 Response regulator receiver domain L3i22_066950 PF00486 Transcriptional regulatory protein, C terminal L3i22_066960 PF09335 SNARE associated Golgi protein L3i22_066990 PF03033 Glycosyltransferase family 28 N-terminal domain L3i22_066990 PF04101 Glycosyltransferase family 28 C-terminal domain L3i22_067000 PF01522 Polysaccharide deacetylase L3i22_067010 PF03239 Iron permease FTR1 family L3i22_067050 PF02687 FtsX-like permease family L3i22_067050 PF00005 ABC transporter L3i22_067050 PF12704 MacB-like periplasmic core domain L3i22_067130 PF00717 Peptidase S24-like L3i22_067130 PF01726 LexA DNA binding domain L3i22_067140 PF00248 Aldo/keto reductase family L3i22_067170 PF01022 Bacterial regulatory protein, arsR family L3i22_067210 PF05977 Transmembrane secretion effector L3i22_067220 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain L3i22_067220 PF00205 Thiamine pyrophosphate enzyme, central domain L3i22_067220 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain L3i22_067230 PF00561 alpha/beta hydrolase fold L3i22_067240 PF12697 Alpha/beta hydrolase family L3i22_067260 PF00196 Bacterial regulatory proteins, luxR family L3i22_067270 PF00931 NB-ARC domain L3i22_067270 PF13176 Tetratricopeptide repeat L3i22_067280 PF00196 Bacterial regulatory proteins, luxR family L3i22_067300 PF01590 GAF domain L3i22_067300 PF08446 PAS fold L3i22_067300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_067300 PF00512 His Kinase A (phospho-acceptor) domain L3i22_067300 PF00360 Phytochrome region L3i22_067310 PF00144 Beta-lactamase L3i22_067390 PF00248 Aldo/keto reductase family L3i22_067400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L3i22_067400 PF00672 HAMP domain L3i22_067400 PF16591 Helical bimodular sensor domain L3i22_067420 PF00561 alpha/beta hydrolase fold L3i22_067430 PF12680 SnoaL-like domain L3i22_067430 PF08281 Sigma-70, region 4 L3i22_067430 PF04542 Sigma-70 region 2 L3i22_067460 PF01638 HxlR-like helix-turn-helix L3i22_067470 PF14765 Polyketide synthase dehydratase L3i22_067470 PF00698 Acyl transferase domain L3i22_067470 PF08240 Alcohol dehydrogenase GroES-like domain L3i22_067470 PF16197 Ketoacyl-synthetase C-terminal extension L3i22_067470 PF00109 Beta-ketoacyl synthase, N-terminal domain L3i22_067470 PF02801 Beta-ketoacyl synthase, C-terminal domain L3i22_067470 PF08659 KR domain L3i22_067470 PF00550 Phosphopantetheine attachment site L3i22_067480 PF00440 Bacterial regulatory proteins, tetR family L3i22_067520 PF01047 MarR family L3i22_067530 PF00561 alpha/beta hydrolase fold L3i22_067540 PF00487 Fatty acid desaturase L3i22_067550 PF07730 Histidine kinase L3i22_067560 PF00072 Response regulator receiver domain L3i22_067560 PF00196 Bacterial regulatory proteins, luxR family L3i22_067600 PF09278 MerR, DNA binding L3i22_067600 PF00376 MerR family regulatory protein L3i22_067660 PF00563 EAL domain L3i22_067660 PF03707 Bacterial signalling protein N terminal repeat L3i22_067660 PF00990 Diguanylate cyclase, GGDEF domain L3i22_067690 PF00561 alpha/beta hydrolase fold L3i22_067710 PF09900 Predicted membrane protein (DUF2127) L3i22_067730 PF13411 MerR HTH family regulatory protein L3i22_067730 PF07739 TipAS antibiotic-recognition domain L3i22_067770 PF00144 Beta-lactamase L3i22_067780 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily L3i22_067790 PF01022 Bacterial regulatory protein, arsR family L3i22_067810 PF00583 Acetyltransferase (GNAT) family L3i22_067820 PF01451 Low molecular weight phosphotyrosine protein phosphatase L3i22_067830 PF05173 Dihydrodipicolinate reductase, C-terminus L3i22_067830 PF01113 Dihydrodipicolinate reductase, N-terminus L3i22_067840 PF07690 Major Facilitator Superfamily L3i22_067880 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain L3i22_067880 PF04616 Glycosyl hydrolases family 43 L3i22_067900 PF13977 BetI-type transcriptional repressor, C-terminal L3i22_067900 PF00440 Bacterial regulatory proteins, tetR family L3i22_067920 PF00296 Luciferase-like monooxygenase L3i22_067930 PF00561 alpha/beta hydrolase fold L3i22_067960 PF00005 ABC transporter L3i22_067990 PF00069 Protein kinase domain L3i22_068020 PF03704 Bacterial transcriptional activator domain L3i22_068020 PF00931 NB-ARC domain L3i22_068020 PF00486 Transcriptional regulatory protein, C terminal L3i22_068050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L3i22_068050 PF03466 LysR substrate binding domain L3i22_068070 PF00248 Aldo/keto reductase family L3i22_068080 PF16591 Helical bimodular sensor domain L3i22_068080 PF00672 HAMP domain L3i22_068080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L3i22_068090 PF00248 Aldo/keto reductase family L3i22_068100 PF00440 Bacterial regulatory proteins, tetR family L3i22_068110 PF00575 S1 RNA binding domain L3i22_068140 PF00356 Bacterial regulatory proteins, lacI family L3i22_068150 PF00553 Cellulose binding domain L3i22_068150 PF00942 Cellulose binding domain L3i22_068150 PF00759 Glycosyl hydrolase family 9 L3i22_068150 PF00041 Fibronectin type III domain L3i22_068160 PF00400 WD domain, G-beta repeat L3i22_068160 PF00069 Protein kinase domain L3i22_068180 PF00561 alpha/beta hydrolase fold L3i22_068230 PF08031 Berberine and berberine like L3i22_068230 PF01565 FAD binding domain L3i22_068240 PF00486 Transcriptional regulatory protein, C terminal L3i22_068240 PF03704 Bacterial transcriptional activator domain L3i22_068240 PF00931 NB-ARC domain L3i22_068260 PF00512 His Kinase A (phospho-acceptor) domain L3i22_068260 PF00360 Phytochrome region L3i22_068260 PF01590 GAF domain L3i22_068260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_068260 PF08446 PAS fold L3i22_068290 PF00331 Glycosyl hydrolase family 10 L3i22_068290 PF00652 Ricin-type beta-trefoil lectin domain L3i22_068430 PF09308 LuxQ, periplasmic L3i22_068430 PF00072 Response regulator receiver domain L3i22_068430 PF00512 His Kinase A (phospho-acceptor) domain L3i22_068430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_068450 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle L3i22_068460 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_068470 PF12911 N-terminal TM domain of oligopeptide transport permease C L3i22_068470 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_068480 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L3i22_068480 PF00005 ABC transporter L3i22_068490 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L3i22_068490 PF00005 ABC transporter L3i22_068520 PF00892 EamA-like transporter family L3i22_068560 PF00571 CBS domain L3i22_068560 PF00291 Pyridoxal-phosphate dependent enzyme L3i22_068590 PF01471 Putative peptidoglycan binding domain L3i22_068590 PF08924 Domain of unknown function (DUF1906) L3i22_068630 PF02901 Pyruvate formate lyase-like L3i22_068630 PF01228 Glycine radical L3i22_068640 PF04055 Radical SAM superfamily L3i22_068680 PF01590 GAF domain L3i22_068680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_068680 PF00512 His Kinase A (phospho-acceptor) domain L3i22_068680 PF08446 PAS fold L3i22_068680 PF00360 Phytochrome region L3i22_068740 PF00107 Zinc-binding dehydrogenase L3i22_068740 PF08240 Alcohol dehydrogenase GroES-like domain L3i22_068800 PF07929 Plasmid pRiA4b ORF-3-like protein L3i22_068900 PF02653 Branched-chain amino acid transport system / permease component L3i22_068910 PF02653 Branched-chain amino acid transport system / permease component L3i22_068920 PF00005 ABC transporter L3i22_068920 PF12399 Branched-chain amino acid ATP-binding cassette transporter L3i22_068930 PF00005 ABC transporter L3i22_068960 PF01037 Lrp/AsnC ligand binding domain L3i22_068970 PF13520 Amino acid permease L3i22_068990 PF00440 Bacterial regulatory proteins, tetR family L3i22_069010 PF00296 Luciferase-like monooxygenase L3i22_069030 PF07992 Pyridine nucleotide-disulphide oxidoreductase L3i22_069030 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain L3i22_069100 PF00005 ABC transporter L3i22_069100 PF00664 ABC transporter transmembrane region L3i22_069110 PF00005 ABC transporter L3i22_069110 PF00664 ABC transporter transmembrane region L3i22_069120 PF00005 ABC transporter L3i22_069120 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L3i22_069130 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_069130 PF12911 N-terminal TM domain of oligopeptide transport permease C L3i22_069140 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_069150 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle L3i22_069160 PF08028 Acyl-CoA dehydrogenase, C-terminal domain L3i22_069160 PF02770 Acyl-CoA dehydrogenase, middle domain L3i22_069160 PF02771 Acyl-CoA dehydrogenase, N-terminal domain L3i22_069170 PF00296 Luciferase-like monooxygenase L3i22_069190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L3i22_069190 PF03466 LysR substrate binding domain L3i22_069200 PF00581 Rhodanese-like domain L3i22_069210 PF01565 FAD binding domain L3i22_069210 PF02913 FAD linked oxidases, C-terminal domain L3i22_069260 PF13183 4Fe-4S dicluster domain L3i22_069260 PF01565 FAD binding domain L3i22_069260 PF02913 FAD linked oxidases, C-terminal domain L3i22_069270 PF00583 Acetyltransferase (GNAT) family L3i22_069290 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase L3i22_069290 PF05697 Bacterial trigger factor protein (TF) L3i22_069290 PF05698 Bacterial trigger factor protein (TF) C-terminus L3i22_069340 PF00005 ABC transporter L3i22_069380 PF13761 Domain of unknown function (DUF4166) L3i22_069400 PF03119 NAD-dependent DNA ligase C4 zinc finger domain L3i22_069400 PF00533 BRCA1 C Terminus (BRCT) domain L3i22_069400 PF01653 NAD-dependent DNA ligase adenylation domain L3i22_069400 PF12826 Helix-hairpin-helix motif L3i22_069400 PF03120 NAD-dependent DNA ligase OB-fold domain L3i22_069450 PF01209 ubiE/COQ5 methyltransferase family L3i22_069460 PF12833 Helix-turn-helix domain L3i22_069460 PF01965 DJ-1/PfpI family L3i22_069480 PF00132 Bacterial transferase hexapeptide (six repeats) L3i22_069490 PF01408 Oxidoreductase family, NAD-binding Rossmann fold L3i22_069490 PF02894 Oxidoreductase family, C-terminal alpha/beta domain L3i22_069500 PF01370 NAD dependent epimerase/dehydratase family L3i22_069510 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family L3i22_069560 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family L3i22_069570 PF00676 Dehydrogenase E1 component L3i22_069580 PF02780 Transketolase, C-terminal domain L3i22_069580 PF02779 Transketolase, pyrimidine binding domain L3i22_069590 PF02780 Transketolase, C-terminal domain L3i22_069590 PF00364 Biotin-requiring enzyme L3i22_069590 PF02779 Transketolase, pyrimidine binding domain L3i22_069620 PF00196 Bacterial regulatory proteins, luxR family L3i22_069620 PF00072 Response regulator receiver domain L3i22_069630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_069630 PF00672 HAMP domain L3i22_069630 PF07730 Histidine kinase L3i22_069640 PF00144 Beta-lactamase L3i22_069730 PF13439 Glycosyltransferase Family 4 L3i22_069730 PF00534 Glycosyl transferases group 1 L3i22_069780 PF03551 Transcriptional regulator PadR-like family L3i22_069840 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain L3i22_069840 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain L3i22_069840 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain L3i22_069850 PF02397 Bacterial sugar transferase L3i22_069860 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase L3i22_069870 PF00483 Nucleotidyl transferase L3i22_069880 PF16363 GDP-mannose 4,6 dehydratase L3i22_069890 PF04321 RmlD substrate binding domain L3i22_069930 PF01580 FtsK/SpoIIIE family L3i22_069970 PF00004 ATPase family associated with various cellular activities (AAA) L3i22_069970 PF17866 AAA lid domain L3i22_070020 PF00486 Transcriptional regulatory protein, C terminal L3i22_070020 PF00931 NB-ARC domain L3i22_070020 PF03704 Bacterial transcriptional activator domain L3i22_070040 PF00069 Protein kinase domain L3i22_070040 PF13360 PQQ-like domain L3i22_070050 PF04542 Sigma-70 region 2 L3i22_070050 PF08281 Sigma-70, region 4 L3i22_070070 PF00106 short chain dehydrogenase L3i22_070080 PF00480 ROK family L3i22_070090 PF00005 ABC transporter L3i22_070100 PF02653 Branched-chain amino acid transport system / permease component L3i22_070120 PF01408 Oxidoreductase family, NAD-binding Rossmann fold L3i22_070120 PF02894 Oxidoreductase family, C-terminal alpha/beta domain L3i22_070150 PF00067 Cytochrome P450 L3i22_070160 PF00990 Diguanylate cyclase, GGDEF domain L3i22_070160 PF00563 EAL domain L3i22_070160 PF03707 Bacterial signalling protein N terminal repeat L3i22_070180 PF13407 Periplasmic binding protein domain L3i22_070190 PF02203 Tar ligand binding domain homologue L3i22_070190 PF00672 HAMP domain L3i22_070190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L3i22_070290 PF00082 Subtilase family L3i22_070290 PF05922 Peptidase inhibitor I9 L3i22_070360 PF01323 DSBA-like thioredoxin domain L3i22_070370 PF00583 Acetyltransferase (GNAT) family L3i22_070400 PF00196 Bacterial regulatory proteins, luxR family L3i22_070400 PF00072 Response regulator receiver domain L3i22_070410 PF07730 Histidine kinase L3i22_070410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_070410 PF05231 MASE1 L3i22_070430 PF00202 Aminotransferase class-III L3i22_070430 PF00109 Beta-ketoacyl synthase, N-terminal domain L3i22_070430 PF00501 AMP-binding enzyme L3i22_070430 PF00550 Phosphopantetheine attachment site L3i22_070430 PF02801 Beta-ketoacyl synthase, C-terminal domain L3i22_070430 PF16197 Ketoacyl-synthetase C-terminal extension L3i22_070430 PF00668 Condensation domain L3i22_070430 PF13193 AMP-binding enzyme C-terminal domain L3i22_070490 PF01116 Fructose-bisphosphate aldolase class-II L3i22_070500 PF00294 pfkB family carbohydrate kinase L3i22_070510 PF00294 pfkB family carbohydrate kinase L3i22_070540 PF00005 ABC transporter L3i22_070540 PF13732 Domain of unknown function (DUF4162) L3i22_070560 PF00881 Nitroreductase family L3i22_070580 PF00561 alpha/beta hydrolase fold L3i22_070590 PF00455 DeoR C terminal sensor domain L3i22_070590 PF08220 DeoR-like helix-turn-helix domain L3i22_070600 PF02056 Family 4 glycosyl hydrolase L3i22_070600 PF11975 Family 4 glycosyl hydrolase C-terminal domain L3i22_070610 PF01380 SIS domain L3i22_070630 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_070640 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_070650 PF00296 Luciferase-like monooxygenase L3i22_070660 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase L3i22_070660 PF03033 Glycosyltransferase family 28 N-terminal domain L3i22_070680 PF13378 Enolase C-terminal domain-like L3i22_070680 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain L3i22_070690 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_070700 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_070710 PF00005 ABC transporter L3i22_070710 PF08402 TOBE domain L3i22_070730 PF00356 Bacterial regulatory proteins, lacI family L3i22_070750 PF00196 Bacterial regulatory proteins, luxR family L3i22_070760 PF13649 Methyltransferase domain L3i22_070780 PF00266 Aminotransferase class-V L3i22_070850 PF00701 Dihydrodipicolinate synthetase family L3i22_070860 PF00392 Bacterial regulatory proteins, gntR family L3i22_070860 PF00155 Aminotransferase class I and II L3i22_070890 PF08447 PAS fold L3i22_070890 PF00990 Diguanylate cyclase, GGDEF domain L3i22_070890 PF05231 MASE1 L3i22_070890 PF08448 PAS fold L3i22_070890 PF13426 PAS domain L3i22_070890 PF00563 EAL domain L3i22_070910 PF13229 Right handed beta helix region L3i22_070940 PF00106 short chain dehydrogenase L3i22_070950 PF01367 5'-3' exonuclease, C-terminal SAM fold L3i22_070950 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain L3i22_070950 PF00476 DNA polymerase family A L3i22_070950 PF09281 Taq polymerase, exonuclease L3i22_070960 PF08386 TAP-like protein L3i22_070960 PF00561 alpha/beta hydrolase fold L3i22_071030 PF02585 GlcNAc-PI de-N-acetylase L3i22_071060 PF02350 UDP-N-acetylglucosamine 2-epimerase L3i22_071070 PF13419 Haloacid dehalogenase-like hydrolase L3i22_071080 PF01022 Bacterial regulatory protein, arsR family L3i22_071100 PF01494 FAD binding domain L3i22_071150 PF01243 Pyridoxamine 5'-phosphate oxidase L3i22_071160 PF13411 MerR HTH family regulatory protein L3i22_071170 PF00356 Bacterial regulatory proteins, lacI family L3i22_071240 PF00248 Aldo/keto reductase family L3i22_071250 PF07690 Major Facilitator Superfamily L3i22_071260 PF00356 Bacterial regulatory proteins, lacI family L3i22_071270 PF08448 PAS fold L3i22_071270 PF00072 Response regulator receiver domain L3i22_071270 PF13426 PAS domain L3i22_071270 PF00512 His Kinase A (phospho-acceptor) domain L3i22_071270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_071280 PF01740 STAS domain L3i22_071330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L3i22_071330 PF03466 LysR substrate binding domain L3i22_071340 PF07690 Major Facilitator Superfamily L3i22_071420 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_071430 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_071440 PF00356 Bacterial regulatory proteins, lacI family L3i22_071450 PF00356 Bacterial regulatory proteins, lacI family L3i22_071460 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus L3i22_071460 PF08666 SAF domain L3i22_071480 PF00356 Bacterial regulatory proteins, lacI family L3i22_071500 PF00293 NUDIX domain L3i22_071510 PF00072 Response regulator receiver domain L3i22_071520 PF07992 Pyridine nucleotide-disulphide oxidoreductase L3i22_071530 PF00313 'Cold-shock' DNA-binding domain L3i22_071590 PF01658 Myo-inositol-1-phosphate synthase L3i22_071600 PF02770 Acyl-CoA dehydrogenase, middle domain L3i22_071600 PF02771 Acyl-CoA dehydrogenase, N-terminal domain L3i22_071600 PF00441 Acyl-CoA dehydrogenase, C-terminal domain L3i22_071620 PF05922 Peptidase inhibitor I9 L3i22_071620 PF00082 Subtilase family L3i22_071680 PF00083 Sugar (and other) transporter L3i22_071700 PF00990 Diguanylate cyclase, GGDEF domain L3i22_071700 PF00563 EAL domain L3i22_071700 PF03707 Bacterial signalling protein N terminal repeat L3i22_071730 PF00005 ABC transporter L3i22_071790 PF13472 GDSL-like Lipase/Acylhydrolase family L3i22_071790 PF17996 Carbohydrate esterase 2 N-terminal L3i22_071850 PF00440 Bacterial regulatory proteins, tetR family L3i22_071850 PF16859 Tetracyclin repressor-like, C-terminal domain L3i22_071900 PF01263 Aldose 1-epimerase L3i22_071910 PF00107 Zinc-binding dehydrogenase L3i22_071910 PF08240 Alcohol dehydrogenase GroES-like domain L3i22_071930 PF13538 UvrD-like helicase C-terminal domain L3i22_071930 PF13538 UvrD-like helicase C-terminal domain L3i22_071940 PF00440 Bacterial regulatory proteins, tetR family L3i22_071940 PF16859 Tetracyclin repressor-like, C-terminal domain L3i22_071960 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase L3i22_071990 PF00005 ABC transporter L3i22_072000 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_072010 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_072050 PF00501 AMP-binding enzyme L3i22_072050 PF13193 AMP-binding enzyme C-terminal domain L3i22_072070 PF13458 Periplasmic binding protein L3i22_072080 PF00005 ABC transporter L3i22_072080 PF12399 Branched-chain amino acid ATP-binding cassette transporter L3i22_072090 PF00005 ABC transporter L3i22_072140 PF00266 Aminotransferase class-V L3i22_072150 PF01593 Flavin containing amine oxidoreductase L3i22_072160 PF18665 Tetracyclin repressor-like, C-terminal domain L3i22_072160 PF00440 Bacterial regulatory proteins, tetR family L3i22_072170 PF07690 Major Facilitator Superfamily L3i22_072270 PF00356 Bacterial regulatory proteins, lacI family L3i22_072280 PF01613 Flavin reductase like domain L3i22_072340 PF01425 Amidase L3i22_072360 PF00664 ABC transporter transmembrane region L3i22_072360 PF00005 ABC transporter L3i22_072410 PF00082 Subtilase family L3i22_072410 PF05922 Peptidase inhibitor I9 L3i22_072490 PF03060 Nitronate monooxygenase L3i22_072530 PF00005 ABC transporter L3i22_072580 PF07992 Pyridine nucleotide-disulphide oxidoreductase L3i22_072590 PF00107 Zinc-binding dehydrogenase L3i22_072590 PF08240 Alcohol dehydrogenase GroES-like domain L3i22_072600 PF00990 Diguanylate cyclase, GGDEF domain L3i22_072620 PF01156 Inosine-uridine preferring nucleoside hydrolase L3i22_072630 PF00544 Pectate lyase L3i22_072640 PF01095 Pectinesterase L3i22_072660 PF10503 Esterase PHB depolymerase L3i22_072690 PF00069 Protein kinase domain L3i22_072690 PF03793 PASTA domain L3i22_072700 PF00155 Aminotransferase class I and II L3i22_072710 PF00892 EamA-like transporter family L3i22_072730 PF02801 Beta-ketoacyl synthase, C-terminal domain L3i22_072730 PF00109 Beta-ketoacyl synthase, N-terminal domain L3i22_072770 PF03023 Lipid II flippase MurJ L3i22_072780 PF00857 Isochorismatase family L3i22_072840 PF07728 AAA domain (dynein-related subfamily) L3i22_072840 PF08406 CbbQ/NirQ/NorQ C-terminal L3i22_072860 PF01580 FtsK/SpoIIIE family L3i22_072910 PF00990 Diguanylate cyclase, GGDEF domain L3i22_072910 PF00072 Response regulator receiver domain L3i22_072930 PF07728 AAA domain (dynein-related subfamily) L3i22_072940 PF05762 VWA domain containing CoxE-like protein L3i22_072970 PF01494 FAD binding domain L3i22_072990 PF00797 N-acetyltransferase L3i22_073030 PF07681 DoxX L3i22_073040 PF17801 Alpha galactosidase C-terminal beta sandwich domain L3i22_073040 PF16499 Alpha galactosidase A L3i22_073050 PF08264 Anticodon-binding domain of tRNA L3i22_073050 PF00133 tRNA synthetases class I (I, L, M and V) L3i22_073100 PF00005 ABC transporter L3i22_073110 PF02909 Tetracyclin repressor-like, C-terminal domain L3i22_073110 PF00440 Bacterial regulatory proteins, tetR family L3i22_073140 PF07690 Major Facilitator Superfamily L3i22_073150 PF01047 MarR family L3i22_073160 PF00072 Response regulator receiver domain L3i22_073160 PF00486 Transcriptional regulatory protein, C terminal L3i22_073170 PF00512 His Kinase A (phospho-acceptor) domain L3i22_073170 PF00672 HAMP domain L3i22_073170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_073220 PF13537 Glutamine amidotransferase domain L3i22_073220 PF00733 Asparagine synthase L3i22_073260 PF00005 ABC transporter L3i22_073260 PF17755 UvrA DNA-binding domain L3i22_073260 PF17760 UvrA interaction domain L3i22_073270 PF13411 MerR HTH family regulatory protein L3i22_073280 PF02577 Bifunctional nuclease L3i22_073290 PF00376 MerR family regulatory protein L3i22_073300 PF00498 FHA domain L3i22_073310 PF01597 Glycine cleavage H-protein L3i22_073330 PF06947 Protein of unknown function (DUF1290) L3i22_073350 PF01066 CDP-alcohol phosphatidyltransferase L3i22_073360 PF12680 SnoaL-like domain L3i22_073360 PF04542 Sigma-70 region 2 L3i22_073360 PF08281 Sigma-70, region 4 L3i22_073380 PF12833 Helix-turn-helix domain L3i22_073380 PF14525 AraC-binding-like domain L3i22_073400 PF17863 AAA lid domain L3i22_073400 PF01078 Magnesium chelatase, subunit ChlI L3i22_073410 PF02567 Phenazine biosynthesis-like protein L3i22_073420 PF00563 EAL domain L3i22_073420 PF05231 MASE1 L3i22_073420 PF00990 Diguanylate cyclase, GGDEF domain L3i22_073420 PF08447 PAS fold L3i22_073420 PF08448 PAS fold L3i22_073420 PF13426 PAS domain L3i22_073430 PF12848 ABC transporter L3i22_073430 PF16326 ABC transporter C-terminal domain L3i22_073430 PF00005 ABC transporter L3i22_073460 PF02638 Glycosyl hydrolase-like 10 L3i22_073470 PF00534 Glycosyl transferases group 1 L3i22_073470 PF13439 Glycosyltransferase Family 4 L3i22_073480 PF03707 Bacterial signalling protein N terminal repeat L3i22_073480 PF00990 Diguanylate cyclase, GGDEF domain L3i22_073480 PF00563 EAL domain L3i22_073480 PF13188 PAS domain L3i22_073490 PF00483 Nucleotidyl transferase L3i22_073500 PF00563 EAL domain L3i22_073500 PF00990 Diguanylate cyclase, GGDEF domain L3i22_073500 PF03707 Bacterial signalling protein N terminal repeat L3i22_073510 PF12833 Helix-turn-helix domain L3i22_073510 PF14525 AraC-binding-like domain L3i22_073550 PF18416 N-acetylglucosamine binding protein domain 2 L3i22_073550 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading L3i22_073570 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase L3i22_073620 PF01740 STAS domain L3i22_073630 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain L3i22_073630 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain L3i22_073650 PF00480 ROK family L3i22_073660 PF02653 Branched-chain amino acid transport system / permease component L3i22_073670 PF00005 ABC transporter L3i22_073680 PF13407 Periplasmic binding protein domain L3i22_073690 PF11762 L-arabinose isomerase C-terminal domain L3i22_073690 PF02610 L-arabinose isomerase L3i22_073700 PF00356 Bacterial regulatory proteins, lacI family L3i22_073720 PF01243 Pyridoxamine 5'-phosphate oxidase L3i22_073740 PF00534 Glycosyl transferases group 1 L3i22_073740 PF13439 Glycosyltransferase Family 4 L3i22_073790 PF05230 MASE2 domain L3i22_073790 PF00990 Diguanylate cyclase, GGDEF domain L3i22_073800 PF00892 EamA-like transporter family L3i22_073810 PF12704 MacB-like periplasmic core domain L3i22_073810 PF00005 ABC transporter L3i22_073810 PF02687 FtsX-like permease family L3i22_073820 PF00005 ABC transporter L3i22_073820 PF02687 FtsX-like permease family L3i22_073820 PF12704 MacB-like periplasmic core domain L3i22_073830 PF13533 Biotin-lipoyl like L3i22_073850 PF00188 Cysteine-rich secretory protein family L3i22_073880 PF01739 CheR methyltransferase, SAM binding domain L3i22_073900 PF00672 HAMP domain L3i22_073900 PF17200 Single Cache domain 2 L3i22_073900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L3i22_073910 PF07194 P2 response regulator binding domain L3i22_073910 PF01584 CheW-like domain L3i22_073910 PF02895 Signal transducing histidine kinase, homodimeric domain L3i22_073910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_073910 PF01627 Hpt domain L3i22_073920 PF01339 CheB methylesterase L3i22_073920 PF00072 Response regulator receiver domain L3i22_073930 PF00486 Transcriptional regulatory protein, C terminal L3i22_073930 PF00072 Response regulator receiver domain L3i22_073950 PF12704 MacB-like periplasmic core domain L3i22_073950 PF02687 FtsX-like permease family L3i22_073950 PF00005 ABC transporter L3i22_073960 PF00005 ABC transporter L3i22_073960 PF02687 FtsX-like permease family L3i22_073960 PF12704 MacB-like periplasmic core domain L3i22_073980 PF00196 Bacterial regulatory proteins, luxR family L3i22_073980 PF00072 Response regulator receiver domain L3i22_074000 PF03466 LysR substrate binding domain L3i22_074000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L3i22_074090 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading L3i22_074130 PF00463 Isocitrate lyase family L3i22_074140 PF01274 Malate synthase L3i22_074150 PF01329 Pterin 4 alpha carbinolamine dehydratase L3i22_074160 PF00884 Sulfatase L3i22_074190 PF02525 Flavodoxin-like fold L3i22_074210 PF00672 HAMP domain L3i22_074210 PF16591 Helical bimodular sensor domain L3i22_074210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L3i22_074220 PF18158 Adaptive response protein AidB N-terminal domain L3i22_074220 PF00441 Acyl-CoA dehydrogenase, C-terminal domain L3i22_074220 PF02770 Acyl-CoA dehydrogenase, middle domain L3i22_074230 PF00563 EAL domain L3i22_074230 PF03707 Bacterial signalling protein N terminal repeat L3i22_074230 PF00990 Diguanylate cyclase, GGDEF domain L3i22_074250 PF00004 ATPase family associated with various cellular activities (AAA) L3i22_074250 PF01434 Peptidase family M41 L3i22_074250 PF06480 FtsH Extracellular L3i22_074250 PF17862 AAA+ lid domain L3i22_074260 PF04389 Peptidase family M28 L3i22_074260 PF02225 PA domain L3i22_074270 PF01209 ubiE/COQ5 methyltransferase family L3i22_074360 PF08402 TOBE domain L3i22_074360 PF00005 ABC transporter L3i22_074380 PF00150 Cellulase (glycosyl hydrolase family 5) L3i22_074380 PF00553 Cellulose binding domain L3i22_074420 PF00440 Bacterial regulatory proteins, tetR family L3i22_074420 PF16859 Tetracyclin repressor-like, C-terminal domain L3i22_074460 PF01032 FecCD transport family L3i22_074470 PF01032 FecCD transport family L3i22_074480 PF00005 ABC transporter L3i22_074490 PF00672 HAMP domain L3i22_074490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L3i22_074490 PF17200 Single Cache domain 2 L3i22_074530 PF01266 FAD dependent oxidoreductase L3i22_074540 PF00171 Aldehyde dehydrogenase family L3i22_074580 PF12697 Alpha/beta hydrolase family L3i22_074600 PF01557 Fumarylacetoacetate (FAA) hydrolase family L3i22_074610 PF00171 Aldehyde dehydrogenase family L3i22_074630 PF03466 LysR substrate binding domain L3i22_074630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L3i22_074640 PF13407 Periplasmic binding protein domain L3i22_074650 PF02653 Branched-chain amino acid transport system / permease component L3i22_074660 PF00005 ABC transporter L3i22_074690 PF04303 PrpF protein L3i22_074710 PF00512 His Kinase A (phospho-acceptor) domain L3i22_074710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_074710 PF00672 HAMP domain L3i22_074720 PF00072 Response regulator receiver domain L3i22_074720 PF00486 Transcriptional regulatory protein, C terminal L3i22_074740 PF00175 Oxidoreductase NAD-binding domain L3i22_074740 PF00042 Globin L3i22_074740 PF00970 Oxidoreductase FAD-binding domain L3i22_074780 PF03816 Cell envelope-related transcriptional attenuator domain L3i22_074790 PF00753 Metallo-beta-lactamase superfamily L3i22_074820 PF07690 Major Facilitator Superfamily L3i22_074830 PF00440 Bacterial regulatory proteins, tetR family L3i22_074840 PF01717 Cobalamin-independent synthase, Catalytic domain L3i22_074890 PF00196 Bacterial regulatory proteins, luxR family L3i22_074890 PF00072 Response regulator receiver domain L3i22_074910 PF02687 FtsX-like permease family L3i22_074910 PF00005 ABC transporter L3i22_074910 PF12704 MacB-like periplasmic core domain L3i22_074940 PF13193 AMP-binding enzyme C-terminal domain L3i22_074940 PF00501 AMP-binding enzyme L3i22_074960 PF00497 Bacterial extracellular solute-binding proteins, family 3 L3i22_074980 PF16918 Protein kinase G tetratricopeptide repeat L3i22_074980 PF16919 Protein kinase G rubredoxin domain L3i22_074980 PF00069 Protein kinase domain L3i22_075020 PF02031 Streptomyces extracellular neutral proteinase (M7) family L3i22_075030 PF00486 Transcriptional regulatory protein, C terminal L3i22_075030 PF03704 Bacterial transcriptional activator domain L3i22_075030 PF00931 NB-ARC domain L3i22_075040 PF00561 alpha/beta hydrolase fold L3i22_075050 PF07690 Major Facilitator Superfamily L3i22_075080 PF00459 Inositol monophosphatase family L3i22_075100 PF00501 AMP-binding enzyme L3i22_075120 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) L3i22_075120 PF00128 Alpha amylase, catalytic domain L3i22_075120 PF02806 Alpha amylase, C-terminal all-beta domain L3i22_075160 PF08148 DSHCT (NUC185) domain L3i22_075160 PF00270 DEAD/DEAH box helicase L3i22_075160 PF00271 Helicase conserved C-terminal domain L3i22_075170 PF13419 Haloacid dehalogenase-like hydrolase L3i22_075200 PF00902 Sec-independent protein translocase protein (TatC) L3i22_075210 PF02416 mttA/Hcf106 family L3i22_075230 PF13280 WYL domain L3i22_075240 PF13280 WYL domain L3i22_075270 PF00990 Diguanylate cyclase, GGDEF domain L3i22_075280 PF01596 O-methyltransferase L3i22_075310 PF03136 Pup-ligase protein L3i22_075320 PF00227 Proteasome subunit L3i22_075330 PF00227 Proteasome subunit L3i22_075340 PF05639 Pup-like protein L3i22_075350 PF03136 Pup-ligase protein L3i22_075370 PF00004 ATPase family associated with various cellular activities (AAA) L3i22_075370 PF16450 Proteasomal ATPase OB C-terminal domain L3i22_075370 PF17758 Proteasomal ATPase OB N-terminal domain L3i22_075400 PF08704 tRNA methyltransferase complex GCD14 subunit L3i22_075410 PF02163 Peptidase family M50 L3i22_075410 PF00571 CBS domain L3i22_075430 PF00196 Bacterial regulatory proteins, luxR family L3i22_075430 PF00072 Response regulator receiver domain L3i22_075470 PF13419 Haloacid dehalogenase-like hydrolase L3i22_075490 PF00005 ABC transporter L3i22_075490 PF02687 FtsX-like permease family L3i22_075490 PF12704 MacB-like periplasmic core domain L3i22_075500 PF00005 ABC transporter L3i22_075500 PF02687 FtsX-like permease family L3i22_075500 PF12704 MacB-like periplasmic core domain L3i22_075630 PF00072 Response regulator receiver domain L3i22_075630 PF00196 Bacterial regulatory proteins, luxR family L3i22_075690 PF01406 tRNA synthetases class I (C) catalytic domain L3i22_075730 PF00296 Luciferase-like monooxygenase L3i22_075740 PF00248 Aldo/keto reductase family L3i22_075760 PF00196 Bacterial regulatory proteins, luxR family L3i22_075760 PF00072 Response regulator receiver domain L3i22_075790 PF07687 Peptidase dimerisation domain L3i22_075790 PF01546 Peptidase family M20/M25/M40 L3i22_075800 PF01814 Hemerythrin HHE cation binding domain L3i22_075810 PF03466 LysR substrate binding domain L3i22_075810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L3i22_075820 PF10431 C-terminal, D2-small domain, of ClpB protein L3i22_075820 PF02861 Clp amino terminal domain, pathogenicity island component L3i22_075820 PF17871 AAA lid domain L3i22_075820 PF07724 AAA domain (Cdc48 subfamily) L3i22_075820 PF00004 ATPase family associated with various cellular activities (AAA) L3i22_075870 PF12538 DNA transporter L3i22_075870 PF01580 FtsK/SpoIIIE family L3i22_075940 PF01258 Prokaryotic dksA/traR C4-type zinc finger L3i22_075960 PF00072 Response regulator receiver domain L3i22_075960 PF00486 Transcriptional regulatory protein, C terminal L3i22_075970 PF07517 SecA DEAD-like domain L3i22_075970 PF01043 SecA preprotein cross-linking domain L3i22_075970 PF07516 SecA Wing and Scaffold domain L3i22_076060 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain L3i22_076060 PF07685 CobB/CobQ-like glutamine amidotransferase domain L3i22_076070 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP L3i22_076080 PF07728 AAA domain (dynein-related subfamily) L3i22_076080 PF17863 AAA lid domain L3i22_076080 PF13519 von Willebrand factor type A domain L3i22_076090 PF00285 Citrate synthase, C-terminal domain L3i22_076110 PF13426 PAS domain L3i22_076110 PF00563 EAL domain L3i22_076110 PF00990 Diguanylate cyclase, GGDEF domain L3i22_076140 PF03372 Endonuclease/Exonuclease/phosphatase family L3i22_076160 PF02310 B12 binding domain L3i22_076160 PF02607 B12 binding domain L3i22_076200 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold L3i22_076200 PF00270 DEAD/DEAH box helicase L3i22_076200 PF11898 Domain of unknown function (DUF3418) L3i22_076200 PF04408 Helicase associated domain (HA2) L3i22_076200 PF00271 Helicase conserved C-terminal domain L3i22_076210 PF03816 Cell envelope-related transcriptional attenuator domain L3i22_076220 PF00072 Response regulator receiver domain L3i22_076230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_076230 PF00512 His Kinase A (phospho-acceptor) domain L3i22_076230 PF08446 PAS fold L3i22_076230 PF00360 Phytochrome region L3i22_076230 PF01590 GAF domain L3i22_076240 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase L3i22_076240 PF13457 GW (Gly-Tryp) dipeptide domain L3i22_076270 PF04545 Sigma-70, region 4 L3i22_076270 PF04539 Sigma-70 region 3 L3i22_076270 PF04542 Sigma-70 region 2 L3i22_076280 PF00480 ROK family L3i22_076290 PF01243 Pyridoxamine 5'-phosphate oxidase L3i22_076310 PF00128 Alpha amylase, catalytic domain L3i22_076310 PF11896 Domain of unknown function (DUF3416) L3i22_076320 PF00128 Alpha amylase, catalytic domain L3i22_076320 PF16657 Maltogenic Amylase, C-terminal domain L3i22_076330 PF18085 Maltokinase N-terminal cap domain L3i22_076340 PF00128 Alpha amylase, catalytic domain L3i22_076340 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) L3i22_076340 PF02806 Alpha amylase, C-terminal all-beta domain L3i22_076360 PF13302 Acetyltransferase (GNAT) domain L3i22_076400 PF17674 HHH domain L3i22_076400 PF09371 Tex-like protein N-terminal domain L3i22_076400 PF00575 S1 RNA binding domain L3i22_076400 PF16921 Tex protein YqgF-like domain L3i22_076410 PF00069 Protein kinase domain L3i22_076410 PF00400 WD domain, G-beta repeat L3i22_076450 PF00578 AhpC/TSA family L3i22_076460 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit L3i22_076460 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region L3i22_076460 PF10531 SLBB domain L3i22_076530 PF00041 Fibronectin type III domain L3i22_076530 PF00553 Cellulose binding domain L3i22_076530 PF01341 Glycosyl hydrolases family 6 L3i22_076540 PF04545 Sigma-70, region 4 L3i22_076540 PF04542 Sigma-70 region 2 L3i22_076560 PF00990 Diguanylate cyclase, GGDEF domain L3i22_076560 PF13426 PAS domain L3i22_076560 PF00563 EAL domain L3i22_076580 PF13419 Haloacid dehalogenase-like hydrolase L3i22_076590 PF02771 Acyl-CoA dehydrogenase, N-terminal domain L3i22_076590 PF00441 Acyl-CoA dehydrogenase, C-terminal domain L3i22_076590 PF02770 Acyl-CoA dehydrogenase, middle domain L3i22_076600 PF02091 Glycyl-tRNA synthetase alpha subunit L3i22_076600 PF02092 Glycyl-tRNA synthetase beta subunit L3i22_076620 PF00196 Bacterial regulatory proteins, luxR family L3i22_076620 PF00072 Response regulator receiver domain L3i22_076630 PF07730 Histidine kinase L3i22_076660 PF03009 Glycerophosphoryl diester phosphodiesterase family L3i22_076680 PF01384 Phosphate transporter family L3i22_076710 PF01261 Xylose isomerase-like TIM barrel L3i22_076720 PF00202 Aminotransferase class-III L3i22_076740 PF00795 Carbon-nitrogen hydrolase L3i22_076750 PF01979 Amidohydrolase family L3i22_076770 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_076780 PF00005 ABC transporter L3i22_076790 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_076800 PF09084 NMT1/THI5 like L3i22_076850 PF00990 Diguanylate cyclase, GGDEF domain L3i22_076850 PF08448 PAS fold L3i22_076850 PF08447 PAS fold L3i22_076850 PF00563 EAL domain L3i22_076860 PF05231 MASE1 L3i22_076860 PF08447 PAS fold L3i22_076860 PF00563 EAL domain L3i22_076860 PF13426 PAS domain L3i22_076860 PF00990 Diguanylate cyclase, GGDEF domain L3i22_076860 PF08448 PAS fold L3i22_076880 PF00069 Protein kinase domain L3i22_076890 PF00356 Bacterial regulatory proteins, lacI family L3i22_076900 PF01965 DJ-1/PfpI family L3i22_076900 PF12833 Helix-turn-helix domain L3i22_076910 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain L3i22_076910 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain L3i22_076920 PF00356 Bacterial regulatory proteins, lacI family L3i22_077000 PF00544 Pectate lyase L3i22_077020 PF02894 Oxidoreductase family, C-terminal alpha/beta domain L3i22_077020 PF01408 Oxidoreductase family, NAD-binding Rossmann fold L3i22_077030 PF01232 Mannitol dehydrogenase Rossmann domain L3i22_077030 PF08125 Mannitol dehydrogenase C-terminal domain L3i22_077040 PF02614 Glucuronate isomerase L3i22_077050 PF01408 Oxidoreductase family, NAD-binding Rossmann fold L3i22_077050 PF02894 Oxidoreductase family, C-terminal alpha/beta domain L3i22_077060 PF00356 Bacterial regulatory proteins, lacI family L3i22_077080 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_077090 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_077120 PF00487 Fatty acid desaturase L3i22_077130 PF01037 Lrp/AsnC ligand binding domain L3i22_077140 PF01262 Alanine dehydrogenase/PNT, C-terminal domain L3i22_077140 PF05222 Alanine dehydrogenase/PNT, N-terminal domain L3i22_077170 PF00072 Response regulator receiver domain L3i22_077170 PF00196 Bacterial regulatory proteins, luxR family L3i22_077180 PF00672 HAMP domain L3i22_077180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_077180 PF07730 Histidine kinase L3i22_077200 PF13556 PucR C-terminal helix-turn-helix domain L3i22_077200 PF17853 GGDEF-like domain L3i22_077210 PF00970 Oxidoreductase FAD-binding domain L3i22_077210 PF00111 2Fe-2S iron-sulfur cluster binding domain L3i22_077210 PF00175 Oxidoreductase NAD-binding domain L3i22_077220 PF00487 Fatty acid desaturase L3i22_077250 PF02056 Family 4 glycosyl hydrolase L3i22_077250 PF11975 Family 4 glycosyl hydrolase C-terminal domain L3i22_077270 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_077280 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_077290 PF00294 pfkB family carbohydrate kinase L3i22_077330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L3i22_077330 PF00672 HAMP domain L3i22_077330 PF12729 Four helix bundle sensory module for signal transduction L3i22_077340 PF07690 Major Facilitator Superfamily L3i22_077370 PF13350 Tyrosine phosphatase family L3i22_077400 PF00111 2Fe-2S iron-sulfur cluster binding domain L3i22_077400 PF00175 Oxidoreductase NAD-binding domain L3i22_077420 PF08281 Sigma-70, region 4 L3i22_077420 PF04542 Sigma-70 region 2 L3i22_077460 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain L3i22_077460 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain L3i22_077470 PF01547 Bacterial extracellular solute-binding protein L3i22_077480 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_077490 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_077500 PF00356 Bacterial regulatory proteins, lacI family L3i22_077510 PF07745 Glycosyl hydrolase family 53 L3i22_077520 PF07745 Glycosyl hydrolase family 53 L3i22_077540 PF03176 MMPL family L3i22_077600 PF07969 Amidohydrolase family L3i22_077660 PF09339 IclR helix-turn-helix domain L3i22_077660 PF01614 Bacterial transcriptional regulator L3i22_077680 PF01557 Fumarylacetoacetate (FAA) hydrolase family L3i22_077690 PF01557 Fumarylacetoacetate (FAA) hydrolase family L3i22_077720 PF03816 Cell envelope-related transcriptional attenuator domain L3i22_077720 PF13399 LytR cell envelope-related transcriptional attenuator L3i22_077730 PF11762 L-arabinose isomerase C-terminal domain L3i22_077730 PF02610 L-arabinose isomerase L3i22_077740 PF02653 Branched-chain amino acid transport system / permease component L3i22_077750 PF02653 Branched-chain amino acid transport system / permease component L3i22_077760 PF00005 ABC transporter L3i22_077770 PF13407 Periplasmic binding protein domain L3i22_077790 PF00356 Bacterial regulatory proteins, lacI family L3i22_077830 PF00440 Bacterial regulatory proteins, tetR family L3i22_077840 PF00596 Class II Aldolase and Adducin N-terminal domain L3i22_077850 PF12849 PBP superfamily domain L3i22_077870 PF00753 Metallo-beta-lactamase superfamily L3i22_077880 PF13086 AAA domain L3i22_077880 PF13087 AAA domain L3i22_077880 PF13195 Protein of unknown function (DUF4011) L3i22_077880 PF13195 Protein of unknown function (DUF4011) L3i22_077880 PF13086 AAA domain L3i22_077880 PF13087 AAA domain L3i22_077900 PF16884 N-terminal domain of oxidoreductase L3i22_077900 PF00107 Zinc-binding dehydrogenase L3i22_077910 PF00440 Bacterial regulatory proteins, tetR family L3i22_077940 PF00989 PAS fold L3i22_077940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_077940 PF00512 His Kinase A (phospho-acceptor) domain L3i22_077940 PF00672 HAMP domain L3i22_077960 PF00672 HAMP domain L3i22_077960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L3i22_077960 PF02743 Cache domain L3i22_078000 PF00005 ABC transporter L3i22_078010 PF00156 Phosphoribosyl transferase domain L3i22_078010 PF05139 Erythromycin esterase L3i22_078020 PF01738 Dienelactone hydrolase family L3i22_078020 PF00156 Phosphoribosyl transferase domain L3i22_078130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L3i22_078130 PF03466 LysR substrate binding domain L3i22_078140 PF00171 Aldehyde dehydrogenase family L3i22_078170 PF13419 Haloacid dehalogenase-like hydrolase L3i22_078180 PF03737 Aldolase/RraA L3i22_078240 PF05448 Acetyl xylan esterase (AXE1) L3i22_078250 PF14490 Helix-hairpin-helix containing domain L3i22_078250 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain L3i22_078250 PF13538 UvrD-like helicase C-terminal domain L3i22_078310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L3i22_078310 PF16591 Helical bimodular sensor domain L3i22_078310 PF00672 HAMP domain L3i22_078320 PF02734 DAK2 domain L3i22_078330 PF02733 Dak1 domain L3i22_078340 PF03610 PTS system fructose IIA component L3i22_078370 PF07690 Major Facilitator Superfamily L3i22_078410 PF00108 Thiolase, N-terminal domain L3i22_078410 PF02803 Thiolase, C-terminal domain L3i22_078420 PF00931 NB-ARC domain L3i22_078420 PF00486 Transcriptional regulatory protein, C terminal L3i22_078420 PF03704 Bacterial transcriptional activator domain L3i22_078450 PF00652 Ricin-type beta-trefoil lectin domain L3i22_078450 PF00331 Glycosyl hydrolase family 10 L3i22_078460 PF02771 Acyl-CoA dehydrogenase, N-terminal domain L3i22_078460 PF02770 Acyl-CoA dehydrogenase, middle domain L3i22_078460 PF00441 Acyl-CoA dehydrogenase, C-terminal domain L3i22_078470 PF00501 AMP-binding enzyme L3i22_078470 PF13193 AMP-binding enzyme C-terminal domain L3i22_078490 PF08240 Alcohol dehydrogenase GroES-like domain L3i22_078490 PF00107 Zinc-binding dehydrogenase L3i22_078500 PF13086 AAA domain L3i22_078500 PF13195 Protein of unknown function (DUF4011) L3i22_078500 PF13195 Protein of unknown function (DUF4011) L3i22_078500 PF13087 AAA domain L3i22_078500 PF13087 AAA domain L3i22_078500 PF13086 AAA domain L3i22_078510 PF13847 Methyltransferase domain L3i22_078520 PF01381 Helix-turn-helix L3i22_078530 PF00378 Enoyl-CoA hydratase/isomerase L3i22_078540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_078540 PF00989 PAS fold L3i22_078540 PF00512 His Kinase A (phospho-acceptor) domain L3i22_078550 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain L3i22_078570 PF00931 NB-ARC domain L3i22_078570 PF03704 Bacterial transcriptional activator domain L3i22_078570 PF00486 Transcriptional regulatory protein, C terminal L3i22_078590 PF00931 NB-ARC domain L3i22_078590 PF03704 Bacterial transcriptional activator domain L3i22_078590 PF00486 Transcriptional regulatory protein, C terminal L3i22_078600 PF06964 Alpha-L-arabinofuranosidase C-terminal domain L3i22_078600 PF02018 Carbohydrate binding domain L3i22_078610 PF04616 Glycosyl hydrolases family 43 L3i22_078610 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain L3i22_078620 PF00563 EAL domain L3i22_078620 PF13426 PAS domain L3i22_078620 PF00990 Diguanylate cyclase, GGDEF domain L3i22_078630 PF03707 Bacterial signalling protein N terminal repeat L3i22_078630 PF00990 Diguanylate cyclase, GGDEF domain L3i22_078630 PF00563 EAL domain L3i22_078640 PF00743 Flavin-binding monooxygenase-like L3i22_078650 PF05199 GMC oxidoreductase L3i22_078660 PF12697 Alpha/beta hydrolase family L3i22_078690 PF02146 Sir2 family L3i22_078720 PF13193 AMP-binding enzyme C-terminal domain L3i22_078720 PF00501 AMP-binding enzyme L3i22_078730 PF01575 MaoC like domain L3i22_078780 PF01425 Amidase L3i22_078790 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain L3i22_078790 PF02129 X-Pro dipeptidyl-peptidase (S15 family) L3i22_078820 PF00005 ABC transporter L3i22_078820 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L3i22_078830 PF00005 ABC transporter L3i22_078830 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L3i22_078840 PF12911 N-terminal TM domain of oligopeptide transport permease C L3i22_078840 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_078850 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_078870 PF08533 Beta-galactosidase C-terminal domain L3i22_078870 PF02449 Beta-galactosidase L3i22_078870 PF08532 Beta-galactosidase trimerisation domain L3i22_078880 PF00990 Diguanylate cyclase, GGDEF domain L3i22_078880 PF03707 Bacterial signalling protein N terminal repeat L3i22_078880 PF13188 PAS domain L3i22_078880 PF00563 EAL domain L3i22_078890 PF00248 Aldo/keto reductase family L3i22_078900 PF07690 Major Facilitator Superfamily L3i22_078910 PF00440 Bacterial regulatory proteins, tetR family L3i22_078910 PF16859 Tetracyclin repressor-like, C-terminal domain L3i22_078920 PF00905 Penicillin binding protein transpeptidase domain L3i22_078920 PF00912 Transglycosylase L3i22_078930 PF13086 AAA domain L3i22_078930 PF13195 Protein of unknown function (DUF4011) L3i22_078930 PF13087 AAA domain L3i22_078930 PF13086 AAA domain L3i22_078930 PF13195 Protein of unknown function (DUF4011) L3i22_078930 PF13087 AAA domain L3i22_078940 PF02719 Polysaccharide biosynthesis protein L3i22_078950 PF02706 Chain length determinant protein L3i22_078950 PF13807 G-rich domain on putative tyrosine kinase L3i22_078950 PF13614 AAA domain L3i22_079000 PF00534 Glycosyl transferases group 1 L3i22_079020 PF02397 Bacterial sugar transferase L3i22_079030 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family L3i22_079080 PF01261 Xylose isomerase-like TIM barrel L3i22_079090 PF04072 Leucine carboxyl methyltransferase L3i22_079100 PF01726 LexA DNA binding domain L3i22_079100 PF00717 Peptidase S24-like L3i22_079160 PF00440 Bacterial regulatory proteins, tetR family L3i22_079200 PF00106 short chain dehydrogenase L3i22_079210 PF07992 Pyridine nucleotide-disulphide oxidoreductase L3i22_079230 PF00265 Thymidine kinase L3i22_079250 PF00248 Aldo/keto reductase family L3i22_079260 PF00990 Diguanylate cyclase, GGDEF domain L3i22_079270 PF00005 ABC transporter L3i22_079270 PF00664 ABC transporter transmembrane region L3i22_079280 PF00005 ABC transporter L3i22_079280 PF00664 ABC transporter transmembrane region L3i22_079290 PF00144 Beta-lactamase L3i22_079310 PF03328 HpcH/HpaI aldolase/citrate lyase family L3i22_079320 PF02771 Acyl-CoA dehydrogenase, N-terminal domain L3i22_079320 PF02770 Acyl-CoA dehydrogenase, middle domain L3i22_079320 PF00441 Acyl-CoA dehydrogenase, C-terminal domain L3i22_079380 PF03972 MmgE/PrpD family L3i22_079390 PF02515 CoA-transferase family III L3i22_079430 PF01614 Bacterial transcriptional regulator L3i22_079430 PF09339 IclR helix-turn-helix domain L3i22_079450 PF01613 Flavin reductase like domain L3i22_079460 PF00441 Acyl-CoA dehydrogenase, C-terminal domain L3i22_079460 PF02770 Acyl-CoA dehydrogenase, middle domain L3i22_079460 PF02771 Acyl-CoA dehydrogenase, N-terminal domain L3i22_079470 PF00171 Aldehyde dehydrogenase family L3i22_079490 PF01494 FAD binding domain L3i22_079500 PF00171 Aldehyde dehydrogenase family L3i22_079560 PF00355 Rieske [2Fe-2S] domain L3i22_079590 PF00106 short chain dehydrogenase L3i22_079660 PF00005 ABC transporter L3i22_079660 PF12399 Branched-chain amino acid ATP-binding cassette transporter L3i22_079670 PF00005 ABC transporter L3i22_079740 PF02515 CoA-transferase family III L3i22_079750 PF01979 Amidohydrolase family L3i22_079790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L3i22_079830 PF04542 Sigma-70 region 2 L3i22_079830 PF08281 Sigma-70, region 4 L3i22_079840 PF06736 Protein of unknown function (DUF1211) L3i22_079860 PF13193 AMP-binding enzyme C-terminal domain L3i22_079860 PF00501 AMP-binding enzyme L3i22_079870 PF00682 HMGL-like L3i22_079880 PF02515 CoA-transferase family III L3i22_079890 PF00857 Isochorismatase family L3i22_079910 PF00072 Response regulator receiver domain L3i22_079910 PF00196 Bacterial regulatory proteins, luxR family L3i22_079940 PF00005 ABC transporter L3i22_080020 PF00072 Response regulator receiver domain L3i22_080020 PF00990 Diguanylate cyclase, GGDEF domain L3i22_080040 PF04542 Sigma-70 region 2 L3i22_080040 PF08281 Sigma-70, region 4 L3i22_080060 PF01341 Glycosyl hydrolases family 6 L3i22_080060 PF00553 Cellulose binding domain L3i22_080150 PF08532 Beta-galactosidase trimerisation domain L3i22_080150 PF02449 Beta-galactosidase L3i22_080150 PF08533 Beta-galactosidase C-terminal domain L3i22_080170 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_080180 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_080190 PF00356 Bacterial regulatory proteins, lacI family L3i22_080220 PF00005 ABC transporter L3i22_080280 PF04616 Glycosyl hydrolases family 43 L3i22_080300 PF02585 GlcNAc-PI de-N-acetylase L3i22_080310 PF03737 Aldolase/RraA L3i22_080320 PF04303 PrpF protein L3i22_080330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily L3i22_080350 PF07690 Major Facilitator Superfamily L3i22_080360 PF07519 Tannase and feruloyl esterase L3i22_080370 PF00561 alpha/beta hydrolase fold L3i22_080380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L3i22_080380 PF03466 LysR substrate binding domain L3i22_080390 PF00106 short chain dehydrogenase L3i22_080400 PF00440 Bacterial regulatory proteins, tetR family L3i22_080400 PF17754 MftR C-terminal domain L3i22_080440 PF00004 ATPase family associated with various cellular activities (AAA) L3i22_080440 PF02190 ATP-dependent protease La (LON) substrate-binding domain L3i22_080440 PF05362 Lon protease (S16) C-terminal proteolytic domain L3i22_080450 PF12804 MobA-like NTP transferase domain L3i22_080450 PF01066 CDP-alcohol phosphatidyltransferase L3i22_080460 PF02625 XdhC and CoxI family L3i22_080460 PF13478 XdhC Rossmann domain L3i22_080470 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase L3i22_080470 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain L3i22_080480 PF00111 2Fe-2S iron-sulfur cluster binding domain L3i22_080480 PF01799 [2Fe-2S] binding domain L3i22_080490 PF03450 CO dehydrogenase flavoprotein C-terminal domain L3i22_080490 PF00941 FAD binding domain in molybdopterin dehydrogenase L3i22_080530 PF00403 Heavy-metal-associated domain L3i22_080540 PF00009 Elongation factor Tu GTP binding domain L3i22_080540 PF03143 Elongation factor Tu C-terminal domain L3i22_080540 PF03144 Elongation factor Tu domain 2 L3i22_080590 PF04978 Protein of unknown function (DUF664) L3i22_080600 PF00005 ABC transporter L3i22_080600 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L3i22_080610 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_080620 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_080620 PF12911 N-terminal TM domain of oligopeptide transport permease C L3i22_080630 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle L3i22_080670 PF03551 Transcriptional regulator PadR-like family L3i22_080690 PF11606 Family 31 carbohydrate binding protein L3i22_080720 PF00392 Bacterial regulatory proteins, gntR family L3i22_080720 PF07702 UTRA domain L3i22_080740 PF00686 Starch binding domain L3i22_080740 PF00128 Alpha amylase, catalytic domain L3i22_080740 PF02806 Alpha amylase, C-terminal all-beta domain L3i22_080770 PF01266 FAD dependent oxidoreductase L3i22_080770 PF16901 C-terminal domain of alpha-glycerophosphate oxidase L3i22_080780 PF02782 FGGY family of carbohydrate kinases, C-terminal domain L3i22_080780 PF00370 FGGY family of carbohydrate kinases, N-terminal domain L3i22_080790 PF00230 Major intrinsic protein L3i22_080800 PF01614 Bacterial transcriptional regulator L3i22_080800 PF09339 IclR helix-turn-helix domain L3i22_080810 PF00370 FGGY family of carbohydrate kinases, N-terminal domain L3i22_080810 PF02782 FGGY family of carbohydrate kinases, C-terminal domain L3i22_080880 PF00082 Subtilase family L3i22_080880 PF05922 Peptidase inhibitor I9 L3i22_080910 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family L3i22_080930 PF13807 G-rich domain on putative tyrosine kinase L3i22_080930 PF02706 Chain length determinant protein L3i22_080930 PF13614 AAA domain L3i22_080980 PF01494 FAD binding domain L3i22_081000 PF08448 PAS fold L3i22_081000 PF00990 Diguanylate cyclase, GGDEF domain L3i22_081030 PF00107 Zinc-binding dehydrogenase L3i22_081030 PF08240 Alcohol dehydrogenase GroES-like domain L3i22_081050 PF01544 CorA-like Mg2+ transporter protein L3i22_081120 PF02397 Bacterial sugar transferase L3i22_081130 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain L3i22_081130 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain L3i22_081130 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain L3i22_081140 PF02719 Polysaccharide biosynthesis protein L3i22_081150 PF00534 Glycosyl transferases group 1 L3i22_081150 PF13439 Glycosyltransferase Family 4 L3i22_081170 PF00196 Bacterial regulatory proteins, luxR family L3i22_081170 PF00072 Response regulator receiver domain L3i22_081190 PF03764 Elongation factor G, domain IV L3i22_081190 PF00009 Elongation factor Tu GTP binding domain L3i22_081190 PF14492 Elongation Factor G, domain II L3i22_081190 PF03144 Elongation factor Tu domain 2 L3i22_081190 PF00679 Elongation factor G C-terminus L3i22_081220 PF00072 Response regulator receiver domain L3i22_081220 PF00196 Bacterial regulatory proteins, luxR family L3i22_081240 PF07690 Major Facilitator Superfamily L3i22_081250 PF00440 Bacterial regulatory proteins, tetR family L3i22_081280 PF04116 Fatty acid hydroxylase superfamily L3i22_081310 PF11606 Family 31 carbohydrate binding protein L3i22_081340 PF04616 Glycosyl hydrolases family 43 L3i22_081340 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain L3i22_081350 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_081360 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_081370 PF01547 Bacterial extracellular solute-binding protein L3i22_081380 PF00356 Bacterial regulatory proteins, lacI family L3i22_081390 PF00563 EAL domain L3i22_081390 PF00990 Diguanylate cyclase, GGDEF domain L3i22_081390 PF13185 GAF domain L3i22_081400 PF00990 Diguanylate cyclase, GGDEF domain L3i22_081400 PF08448 PAS fold L3i22_081450 PF00072 Response regulator receiver domain L3i22_081460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_081460 PF00989 PAS fold L3i22_081460 PF17203 Single cache domain 3 L3i22_081460 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain L3i22_081470 PF00375 Sodium:dicarboxylate symporter family L3i22_081480 PF13732 Domain of unknown function (DUF4162) L3i22_081480 PF00005 ABC transporter L3i22_081490 PF01061 ABC-2 type transporter L3i22_081500 PF00196 Bacterial regulatory proteins, luxR family L3i22_081520 PF00196 Bacterial regulatory proteins, luxR family L3i22_081520 PF00072 Response regulator receiver domain L3i22_081530 PF13492 GAF domain L3i22_081530 PF07730 Histidine kinase L3i22_081530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_081540 PF05506 Domain of unknown function (DUF756) L3i22_081540 PF04185 Phosphoesterase family L3i22_081550 PF05506 Domain of unknown function (DUF756) L3i22_081550 PF04185 Phosphoesterase family L3i22_081590 PF00005 ABC transporter L3i22_081590 PF00664 ABC transporter transmembrane region L3i22_081600 PF00664 ABC transporter transmembrane region L3i22_081600 PF00005 ABC transporter L3i22_081620 PF00282 Pyridoxal-dependent decarboxylase conserved domain L3i22_081640 PF00486 Transcriptional regulatory protein, C terminal L3i22_081640 PF00072 Response regulator receiver domain L3i22_081650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_081650 PF00672 HAMP domain L3i22_081650 PF00512 His Kinase A (phospho-acceptor) domain L3i22_081670 PF00196 Bacterial regulatory proteins, luxR family L3i22_081670 PF00072 Response regulator receiver domain L3i22_081700 PF07690 Major Facilitator Superfamily L3i22_081720 PF00005 ABC transporter L3i22_081720 PF00664 ABC transporter transmembrane region L3i22_081730 PF01494 FAD binding domain L3i22_081770 PF08310 LGFP repeat L3i22_081770 PF00756 Putative esterase L3i22_081780 PF00069 Protein kinase domain L3i22_081790 PF08447 PAS fold L3i22_081790 PF13426 PAS domain L3i22_081790 PF08448 PAS fold L3i22_081790 PF05231 MASE1 L3i22_081790 PF00563 EAL domain L3i22_081790 PF00990 Diguanylate cyclase, GGDEF domain L3i22_081800 PF00326 Prolyl oligopeptidase family L3i22_081800 PF07676 WD40-like Beta Propeller Repeat L3i22_081830 PF00266 Aminotransferase class-V L3i22_081840 PF00291 Pyridoxal-phosphate dependent enzyme L3i22_081870 PF01095 Pectinesterase L3i22_081890 PF00067 Cytochrome P450 L3i22_081900 PF02801 Beta-ketoacyl synthase, C-terminal domain L3i22_081900 PF00109 Beta-ketoacyl synthase, N-terminal domain L3i22_081910 PF00550 Phosphopantetheine attachment site L3i22_082050 PF06737 Transglycosylase-like domain L3i22_082050 PF01476 LysM domain L3i22_082070 PF07971 Glycosyl hydrolase family 92 L3i22_082070 PF17678 Glycosyl hydrolase family 92 N-terminal domain L3i22_082130 PF00370 FGGY family of carbohydrate kinases, N-terminal domain L3i22_082130 PF02782 FGGY family of carbohydrate kinases, C-terminal domain L3i22_082140 PF01614 Bacterial transcriptional regulator L3i22_082140 PF09339 IclR helix-turn-helix domain L3i22_082150 PF02782 FGGY family of carbohydrate kinases, C-terminal domain L3i22_082150 PF00370 FGGY family of carbohydrate kinases, N-terminal domain L3i22_082160 PF01266 FAD dependent oxidoreductase L3i22_082160 PF16901 C-terminal domain of alpha-glycerophosphate oxidase L3i22_082170 PF00990 Diguanylate cyclase, GGDEF domain L3i22_082170 PF03707 Bacterial signalling protein N terminal repeat L3i22_082170 PF00563 EAL domain L3i22_082230 PF00156 Phosphoribosyl transferase domain L3i22_082260 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain L3i22_082260 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain L3i22_082270 PF02705 K+ potassium transporter L3i22_082280 PF00196 Bacterial regulatory proteins, luxR family L3i22_082300 PF00501 AMP-binding enzyme L3i22_082300 PF13193 AMP-binding enzyme C-terminal domain L3i22_082310 PF00378 Enoyl-CoA hydratase/isomerase L3i22_082320 PF00440 Bacterial regulatory proteins, tetR family L3i22_082330 PF02770 Acyl-CoA dehydrogenase, middle domain L3i22_082330 PF00441 Acyl-CoA dehydrogenase, C-terminal domain L3i22_082330 PF02771 Acyl-CoA dehydrogenase, N-terminal domain L3i22_082340 PF02522 Aminoglycoside 3-N-acetyltransferase L3i22_082360 PF00931 NB-ARC domain L3i22_082360 PF03704 Bacterial transcriptional activator domain L3i22_082360 PF00486 Transcriptional regulatory protein, C terminal L3i22_082390 PF04055 Radical SAM superfamily L3i22_082400 PF00990 Diguanylate cyclase, GGDEF domain L3i22_082400 PF03707 Bacterial signalling protein N terminal repeat L3i22_082400 PF13188 PAS domain L3i22_082400 PF00563 EAL domain L3i22_082420 PF00563 EAL domain L3i22_082420 PF03707 Bacterial signalling protein N terminal repeat L3i22_082420 PF00990 Diguanylate cyclase, GGDEF domain L3i22_082440 PF00356 Bacterial regulatory proteins, lacI family L3i22_082470 PF00069 Protein kinase domain L3i22_082470 PF03793 PASTA domain L3i22_082480 PF08240 Alcohol dehydrogenase GroES-like domain L3i22_082480 PF00107 Zinc-binding dehydrogenase L3i22_082610 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain L3i22_082610 PF05860 haemagglutination activity domain L3i22_082610 PF05594 Haemagluttinin repeat L3i22_082610 PF13332 Hemagglutinin repeat L3i22_082610 PF13018 Extended Signal Peptide of Type V secretion system L3i22_082630 PF00271 Helicase conserved C-terminal domain L3i22_082630 PF00270 DEAD/DEAH box helicase L3i22_082630 PF03880 DbpA RNA binding domain L3i22_082640 PF13361 UvrD-like helicase C-terminal domain L3i22_082640 PF00570 HRDC domain L3i22_082660 PF02384 N-6 DNA Methylase L3i22_082660 PF12161 HsdM N-terminal domain L3i22_082670 PF12137 RNA polymerase recycling family C-terminal L3i22_082670 PF18339 RapA N-terminal Tudor like domain 1 L3i22_082670 PF18337 RapA N-terminal Tudor like domain L3i22_082670 PF00271 Helicase conserved C-terminal domain L3i22_082670 PF00176 SNF2 family N-terminal domain L3i22_082680 PF03793 PASTA domain L3i22_082680 PF00069 Protein kinase domain L3i22_082690 PF05958 tRNA (Uracil-5-)-methyltransferase L3i22_082690 PF01938 TRAM domain L3i22_082780 PF13086 AAA domain L3i22_082780 PF13087 AAA domain L3i22_082780 PF13195 Protein of unknown function (DUF4011) L3i22_082980 PF04542 Sigma-70 region 2 L3i22_082980 PF04545 Sigma-70, region 4 L3i22_082990 PF17874 MalT-like TPR region L3i22_082990 PF00196 Bacterial regulatory proteins, luxR family L3i22_083080 PF01494 FAD binding domain L3i22_083120 PF00196 Bacterial regulatory proteins, luxR family L3i22_083120 PF00072 Response regulator receiver domain L3i22_083140 PF00106 short chain dehydrogenase L3i22_083150 PF00440 Bacterial regulatory proteins, tetR family L3i22_083170 PF00854 POT family L3i22_083190 PF03176 MMPL family L3i22_083320 PF00990 Diguanylate cyclase, GGDEF domain L3i22_083320 PF03707 Bacterial signalling protein N terminal repeat L3i22_083320 PF00563 EAL domain L3i22_083350 PF00990 Diguanylate cyclase, GGDEF domain L3i22_083400 PF00082 Subtilase family L3i22_083420 PF00289 Biotin carboxylase, N-terminal domain L3i22_083420 PF02785 Biotin carboxylase C-terminal domain L3i22_083420 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain L3i22_083450 PF00682 HMGL-like L3i22_083450 PF08502 LeuA allosteric (dimerisation) domain L3i22_083480 PF00931 NB-ARC domain L3i22_083480 PF03704 Bacterial transcriptional activator domain L3i22_083480 PF00486 Transcriptional regulatory protein, C terminal L3i22_083490 PF17837 4'-phosphopantetheinyl transferase N-terminal domain L3i22_083490 PF01648 4'-phosphopantetheinyl transferase superfamily L3i22_083500 PF00975 Thioesterase domain L3i22_083520 PF01494 FAD binding domain L3i22_083530 PF07690 Major Facilitator Superfamily L3i22_083540 PF00550 Phosphopantetheine attachment site L3i22_083540 PF00698 Acyl transferase domain L3i22_083540 PF08240 Alcohol dehydrogenase GroES-like domain L3i22_083540 PF16197 Ketoacyl-synthetase C-terminal extension L3i22_083540 PF00109 Beta-ketoacyl synthase, N-terminal domain L3i22_083540 PF02801 Beta-ketoacyl synthase, C-terminal domain L3i22_083540 PF08659 KR domain L3i22_083540 PF14765 Polyketide synthase dehydratase L3i22_083580 PF01878 EVE domain L3i22_083620 PF00196 Bacterial regulatory proteins, luxR family L3i22_083700 PF00975 Thioesterase domain L3i22_083730 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain L3i22_083730 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain L3i22_083740 PF00668 Condensation domain L3i22_083740 PF00550 Phosphopantetheine attachment site L3i22_083740 PF13193 AMP-binding enzyme C-terminal domain L3i22_083740 PF00501 AMP-binding enzyme L3i22_083740 PF00975 Thioesterase domain L3i22_083750 PF00668 Condensation domain L3i22_083750 PF00550 Phosphopantetheine attachment site L3i22_083750 PF13193 AMP-binding enzyme C-terminal domain L3i22_083750 PF00501 AMP-binding enzyme L3i22_083750 PF00975 Thioesterase domain L3i22_083780 PF16197 Ketoacyl-synthetase C-terminal extension L3i22_083780 PF02801 Beta-ketoacyl synthase, C-terminal domain L3i22_083780 PF08240 Alcohol dehydrogenase GroES-like domain L3i22_083780 PF08659 KR domain L3i22_083780 PF00550 Phosphopantetheine attachment site L3i22_083780 PF00698 Acyl transferase domain L3i22_083780 PF14765 Polyketide synthase dehydratase L3i22_083780 PF00109 Beta-ketoacyl synthase, N-terminal domain L3i22_083790 PF08240 Alcohol dehydrogenase GroES-like domain L3i22_083790 PF16197 Ketoacyl-synthetase C-terminal extension L3i22_083790 PF00109 Beta-ketoacyl synthase, N-terminal domain L3i22_083790 PF02801 Beta-ketoacyl synthase, C-terminal domain L3i22_083790 PF08659 KR domain L3i22_083790 PF00550 Phosphopantetheine attachment site L3i22_083790 PF14765 Polyketide synthase dehydratase L3i22_083790 PF00698 Acyl transferase domain L3i22_083800 PF00550 Phosphopantetheine attachment site L3i22_083800 PF08659 KR domain L3i22_083800 PF16197 Ketoacyl-synthetase C-terminal extension L3i22_083800 PF00109 Beta-ketoacyl synthase, N-terminal domain L3i22_083800 PF08990 Erythronolide synthase docking L3i22_083800 PF00698 Acyl transferase domain L3i22_083800 PF02801 Beta-ketoacyl synthase, C-terminal domain L3i22_083810 PF00698 Acyl transferase domain L3i22_083810 PF00109 Beta-ketoacyl synthase, N-terminal domain L3i22_083810 PF08659 KR domain L3i22_083810 PF00550 Phosphopantetheine attachment site L3i22_083810 PF14765 Polyketide synthase dehydratase L3i22_083810 PF08240 Alcohol dehydrogenase GroES-like domain L3i22_083810 PF16197 Ketoacyl-synthetase C-terminal extension L3i22_083810 PF02801 Beta-ketoacyl synthase, C-terminal domain L3i22_083820 PF08659 KR domain L3i22_083820 PF00109 Beta-ketoacyl synthase, N-terminal domain L3i22_083820 PF02801 Beta-ketoacyl synthase, C-terminal domain L3i22_083820 PF14765 Polyketide synthase dehydratase L3i22_083820 PF00550 Phosphopantetheine attachment site L3i22_083820 PF00698 Acyl transferase domain L3i22_083820 PF16197 Ketoacyl-synthetase C-terminal extension L3i22_083860 PF01119 DNA mismatch repair protein, C-terminal domain L3i22_083860 PF08676 MutL C terminal dimerisation domain L3i22_083910 PF00732 GMC oxidoreductase L3i22_083910 PF05199 GMC oxidoreductase L3i22_083920 PF00890 FAD binding domain L3i22_083930 PF00296 Luciferase-like monooxygenase L3i22_083940 PF08240 Alcohol dehydrogenase GroES-like domain L3i22_083940 PF00107 Zinc-binding dehydrogenase L3i22_083960 PF00440 Bacterial regulatory proteins, tetR family L3i22_083960 PF17932 Tetracyclin repressor-like, C-terminal domain L3i22_084000 PF00171 Aldehyde dehydrogenase family L3i22_084020 PF00378 Enoyl-CoA hydratase/isomerase L3i22_084030 PF01144 Coenzyme A transferase L3i22_084050 PF03060 Nitronate monooxygenase L3i22_084060 PF00107 Zinc-binding dehydrogenase L3i22_084060 PF08240 Alcohol dehydrogenase GroES-like domain L3i22_084080 PF00106 short chain dehydrogenase L3i22_084100 PF00296 Luciferase-like monooxygenase L3i22_084110 PF00441 Acyl-CoA dehydrogenase, C-terminal domain L3i22_084110 PF02771 Acyl-CoA dehydrogenase, N-terminal domain L3i22_084120 PF02771 Acyl-CoA dehydrogenase, N-terminal domain L3i22_084120 PF02770 Acyl-CoA dehydrogenase, middle domain L3i22_084120 PF00441 Acyl-CoA dehydrogenase, C-terminal domain L3i22_084130 PF02803 Thiolase, C-terminal domain L3i22_084130 PF00108 Thiolase, N-terminal domain L3i22_084140 PF03060 Nitronate monooxygenase L3i22_084150 PF00501 AMP-binding enzyme L3i22_084150 PF13193 AMP-binding enzyme C-terminal domain L3i22_084160 PF00378 Enoyl-CoA hydratase/isomerase L3i22_084170 PF00501 AMP-binding enzyme L3i22_084170 PF13193 AMP-binding enzyme C-terminal domain L3i22_084190 PF00108 Thiolase, N-terminal domain L3i22_084190 PF02803 Thiolase, C-terminal domain L3i22_084210 PF00067 Cytochrome P450 L3i22_084220 PF00108 Thiolase, N-terminal domain L3i22_084220 PF02803 Thiolase, C-terminal domain L3i22_084250 PF00441 Acyl-CoA dehydrogenase, C-terminal domain L3i22_084250 PF02770 Acyl-CoA dehydrogenase, middle domain L3i22_084250 PF02771 Acyl-CoA dehydrogenase, N-terminal domain L3i22_084260 PF13193 AMP-binding enzyme C-terminal domain L3i22_084260 PF00501 AMP-binding enzyme L3i22_084270 PF00378 Enoyl-CoA hydratase/isomerase L3i22_084280 PF02770 Acyl-CoA dehydrogenase, middle domain L3i22_084280 PF00441 Acyl-CoA dehydrogenase, C-terminal domain L3i22_084280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain L3i22_084290 PF02771 Acyl-CoA dehydrogenase, N-terminal domain L3i22_084290 PF02770 Acyl-CoA dehydrogenase, middle domain L3i22_084290 PF00441 Acyl-CoA dehydrogenase, C-terminal domain L3i22_084300 PF00441 Acyl-CoA dehydrogenase, C-terminal domain L3i22_084300 PF02770 Acyl-CoA dehydrogenase, middle domain L3i22_084300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain L3i22_084320 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain L3i22_084320 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain L3i22_084330 PF00171 Aldehyde dehydrogenase family L3i22_084350 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain L3i22_084350 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain L3i22_084440 PF01613 Flavin reductase like domain L3i22_084450 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily L3i22_084460 PF12697 Alpha/beta hydrolase family L3i22_084470 PF08028 Acyl-CoA dehydrogenase, C-terminal domain L3i22_084470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain L3i22_084480 PF00355 Rieske [2Fe-2S] domain L3i22_084500 PF00970 Oxidoreductase FAD-binding domain L3i22_084500 PF00175 Oxidoreductase NAD-binding domain L3i22_084500 PF00111 2Fe-2S iron-sulfur cluster binding domain L3i22_084510 PF13229 Right handed beta helix region L3i22_084520 PF00682 HMGL-like L3i22_084520 PF07836 DmpG-like communication domain L3i22_084530 PF01118 Semialdehyde dehydrogenase, NAD binding domain L3i22_084530 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation L3i22_084540 PF01557 Fumarylacetoacetate (FAA) hydrolase family L3i22_084550 PF00890 FAD binding domain L3i22_084560 PF00890 FAD binding domain L3i22_084590 PF02771 Acyl-CoA dehydrogenase, N-terminal domain L3i22_084590 PF02770 Acyl-CoA dehydrogenase, middle domain L3i22_084590 PF00441 Acyl-CoA dehydrogenase, C-terminal domain L3i22_084600 PF02771 Acyl-CoA dehydrogenase, N-terminal domain L3i22_084600 PF00441 Acyl-CoA dehydrogenase, C-terminal domain L3i22_084610 PF17925 Tetracyclin repressor-like, C-terminal domain L3i22_084610 PF00440 Bacterial regulatory proteins, tetR family L3i22_084660 PF03704 Bacterial transcriptional activator domain L3i22_084660 PF00931 NB-ARC domain L3i22_084660 PF00486 Transcriptional regulatory protein, C terminal L3i22_084680 PF00196 Bacterial regulatory proteins, luxR family L3i22_084680 PF00072 Response regulator receiver domain L3i22_084700 PF00486 Transcriptional regulatory protein, C terminal L3i22_084700 PF03704 Bacterial transcriptional activator domain L3i22_084700 PF00931 NB-ARC domain L3i22_084710 PF00486 Transcriptional regulatory protein, C terminal L3i22_084710 PF00931 NB-ARC domain L3i22_084710 PF03704 Bacterial transcriptional activator domain L3i22_084720 PF00400 WD domain, G-beta repeat L3i22_084720 PF00069 Protein kinase domain L3i22_084740 PF00004 ATPase family associated with various cellular activities (AAA) L3i22_084740 PF17866 AAA lid domain L3i22_084790 PF01580 FtsK/SpoIIIE family L3i22_084910 PF00069 Protein kinase domain L3i22_084910 PF00400 WD domain, G-beta repeat L3i22_084920 PF01580 FtsK/SpoIIIE family L3i22_084950 PF04389 Peptidase family M28 L3i22_084950 PF01447 Thermolysin metallopeptidase, catalytic domain L3i22_084950 PF02868 Thermolysin metallopeptidase, alpha-helical domain L3i22_085000 PF00486 Transcriptional regulatory protein, C terminal L3i22_085100 PF02868 Thermolysin metallopeptidase, alpha-helical domain L3i22_085100 PF01447 Thermolysin metallopeptidase, catalytic domain L3i22_085150 PF00069 Protein kinase domain L3i22_085150 PF14032 PknH-like extracellular domain L3i22_085210 PF00067 Cytochrome P450 L3i22_085260 PF07690 Major Facilitator Superfamily L3i22_085280 PF00067 Cytochrome P450 L3i22_085290 PF00289 Biotin carboxylase, N-terminal domain L3i22_085290 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain L3i22_085290 PF02785 Biotin carboxylase C-terminal domain L3i22_085290 PF00364 Biotin-requiring enzyme L3i22_085310 PF02801 Beta-ketoacyl synthase, C-terminal domain L3i22_085310 PF00109 Beta-ketoacyl synthase, N-terminal domain L3i22_085320 PF00109 Beta-ketoacyl synthase, N-terminal domain L3i22_085320 PF02801 Beta-ketoacyl synthase, C-terminal domain L3i22_085330 PF00550 Phosphopantetheine attachment site L3i22_085340 PF00106 short chain dehydrogenase L3i22_085350 PF03364 Polyketide cyclase / dehydrase and lipid transport L3i22_085370 PF01039 Carboxyl transferase domain L3i22_085400 PF02632 BioY family L3i22_085540 PF09594 Glycosyltransferase family 87 L3i22_085580 PF12256 Insecticide toxin TcdB middle/N-terminal region L3i22_085580 PF03534 Salmonella virulence plasmid 65kDa B protein L3i22_085580 PF12255 Insecticide toxin TcdB middle/C-terminal region L3i22_085610 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal L3i22_085610 PF01926 50S ribosome-binding GTPase L3i22_085620 PF02224 Cytidylate kinase L3i22_085640 PF00583 Acetyltransferase (GNAT) family L3i22_085660 PF02839 Carbohydrate binding domain L3i22_085670 PF01522 Polysaccharide deacetylase L3i22_085680 PF00892 EamA-like transporter family L3i22_085730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L3i22_085730 PF03466 LysR substrate binding domain L3i22_085770 PF00472 RF-1 domain L3i22_085770 PF03462 PCRF domain L3i22_085780 PF01139 tRNA-splicing ligase RtcB L3i22_085790 PF13193 AMP-binding enzyme C-terminal domain L3i22_085790 PF00501 AMP-binding enzyme L3i22_085830 PF00561 alpha/beta hydrolase fold L3i22_085870 PF01479 S4 domain L3i22_085870 PF00849 RNA pseudouridylate synthase L3i22_085880 PF04079 Segregation and condensation complex subunit ScpB L3i22_085890 PF02616 Segregation and condensation protein ScpA L3i22_085920 PF01965 DJ-1/PfpI family L3i22_085920 PF12833 Helix-turn-helix domain L3i22_085930 PF01965 DJ-1/PfpI family L3i22_085950 PF13614 AAA domain L3i22_085960 PF02899 Phage integrase, N-terminal SAM-like domain L3i22_085960 PF00589 Phage integrase family L3i22_085970 PF05222 Alanine dehydrogenase/PNT, N-terminal domain L3i22_085970 PF01262 Alanine dehydrogenase/PNT, C-terminal domain L3i22_086010 PF01341 Glycosyl hydrolases family 6 L3i22_086010 PF00553 Cellulose binding domain L3i22_086050 PF00561 alpha/beta hydrolase fold L3i22_086070 PF00293 NUDIX domain L3i22_086080 PF06418 CTP synthase N-terminus L3i22_086080 PF00117 Glutamine amidotransferase class-I L3i22_086130 PF11382 Copper transport outer membrane protein, MctB L3i22_086150 PF02463 RecF/RecN/SMC N terminal domain L3i22_086170 PF01513 ATP-NAD kinase L3i22_086180 PF01479 S4 domain L3i22_086180 PF01728 FtsJ-like methyltransferase L3i22_086220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L3i22_086220 PF00672 HAMP domain L3i22_086240 PF13344 Haloacid dehalogenase-like hydrolase L3i22_086240 PF18407 GCN5-related N-acetyltransferase like domain L3i22_086270 PF00579 tRNA synthetases class I (W and Y) L3i22_086280 PF03976 Polyphosphate kinase 2 (PPK2) L3i22_086300 PF02896 PEP-utilising enzyme, TIM barrel domain L3i22_086300 PF00391 PEP-utilising enzyme, mobile domain L3i22_086300 PF05524 PEP-utilising enzyme, N-terminal L3i22_086310 PF00381 PTS HPr component phosphorylation site L3i22_086320 PF00107 Zinc-binding dehydrogenase L3i22_086320 PF08240 Alcohol dehydrogenase GroES-like domain L3i22_086330 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 L3i22_086340 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit L3i22_086340 PF02378 Phosphotransferase system, EIIC L3i22_086340 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 L3i22_086350 PF02378 Phosphotransferase system, EIIC L3i22_086350 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit L3i22_086350 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 L3i22_086360 PF00294 pfkB family carbohydrate kinase L3i22_086370 PF08220 DeoR-like helix-turn-helix domain L3i22_086370 PF00455 DeoR C terminal sensor domain L3i22_086390 PF05191 Adenylate kinase, active site lid L3i22_086420 PF00491 Arginase family L3i22_086520 PF02245 Methylpurine-DNA glycosylase (MPG) L3i22_086530 PF13538 UvrD-like helicase C-terminal domain L3i22_086560 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_086570 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_086580 PF13416 Bacterial extracellular solute-binding protein L3i22_086590 PF08402 TOBE domain L3i22_086590 PF00005 ABC transporter L3i22_086600 PF00171 Aldehyde dehydrogenase family L3i22_086610 PF17853 GGDEF-like domain L3i22_086610 PF05651 Putative sugar diacid recognition L3i22_086610 PF13556 PucR C-terminal helix-turn-helix domain L3i22_086670 PF03707 Bacterial signalling protein N terminal repeat L3i22_086670 PF00990 Diguanylate cyclase, GGDEF domain L3i22_086670 PF00563 EAL domain L3i22_086670 PF13188 PAS domain L3i22_086680 PF01925 Sulfite exporter TauE/SafE L3i22_086690 PF03707 Bacterial signalling protein N terminal repeat L3i22_086690 PF00990 Diguanylate cyclase, GGDEF domain L3i22_086690 PF00563 EAL domain L3i22_086700 PF00990 Diguanylate cyclase, GGDEF domain L3i22_086700 PF00563 EAL domain L3i22_086700 PF03707 Bacterial signalling protein N terminal repeat L3i22_086730 PF00392 Bacterial regulatory proteins, gntR family L3i22_086740 PF00583 Acetyltransferase (GNAT) family L3i22_086760 PF03714 Bacterial pullanase-associated domain L3i22_086760 PF00128 Alpha amylase, catalytic domain L3i22_086760 PF02806 Alpha amylase, C-terminal all-beta domain L3i22_086770 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_086780 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_086780 PF14785 Maltose transport system permease protein MalF P2 domain L3i22_086800 PF00356 Bacterial regulatory proteins, lacI family L3i22_086820 PF01546 Peptidase family M20/M25/M40 L3i22_086820 PF07687 Peptidase dimerisation domain L3i22_086830 PF00206 Lyase L3i22_086830 PF14698 Argininosuccinate lyase C-terminal L3i22_086850 PF00764 Arginosuccinate synthase L3i22_086870 PF01316 Arginine repressor, DNA binding domain L3i22_086870 PF02863 Arginine repressor, C-terminal domain L3i22_086880 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain L3i22_086880 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain L3i22_086890 PF00202 Aminotransferase class-III L3i22_086900 PF00696 Amino acid kinase family L3i22_086910 PF01960 ArgJ family L3i22_086920 PF01118 Semialdehyde dehydrogenase, NAD binding domain L3i22_086920 PF02774 Semialdehyde dehydrogenase, dimerisation domain L3i22_086950 PF10017 Histidine-specific methyltransferase, SAM-dependent L3i22_086970 PF03781 Sulfatase-modifying factor enzyme 1 L3i22_086970 PF12867 DinB superfamily L3i22_086980 PF04107 Glutamate-cysteine ligase family 2(GCS2) L3i22_086990 PF00933 Glycosyl hydrolase family 3 N terminal domain L3i22_086990 PF01915 Glycosyl hydrolase family 3 C-terminal domain L3i22_086990 PF14310 Fibronectin type III-like domain L3i22_087000 PF00583 Acetyltransferase (GNAT) family L3i22_087010 PF02698 DUF218 domain L3i22_087020 PF01494 FAD binding domain L3i22_087040 PF04389 Peptidase family M28 L3i22_087040 PF04151 Bacterial pre-peptidase C-terminal domain L3i22_087090 PF07690 Major Facilitator Superfamily L3i22_087100 PF00857 Isochorismatase family L3i22_087110 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain L3i22_087110 PF01588 Putative tRNA binding domain L3i22_087110 PF03147 Ferredoxin-fold anticodon binding domain L3i22_087110 PF03483 B3/4 domain L3i22_087110 PF03484 tRNA synthetase B5 domain L3i22_087120 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain L3i22_087120 PF01409 tRNA synthetases class II core domain (F) L3i22_087130 PF00588 SpoU rRNA Methylase family L3i22_087130 PF08032 RNA 2'-O ribose methyltransferase substrate binding L3i22_087140 PF00453 Ribosomal protein L20 L3i22_087150 PF01632 Ribosomal protein L35 L3i22_087160 PF00707 Translation initiation factor IF-3, C-terminal domain L3i22_087160 PF05198 Translation initiation factor IF-3, N-terminal domain L3i22_087180 PF01634 ATP phosphoribosyltransferase L3i22_087180 PF08029 HisG, C-terminal domain L3i22_087190 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase L3i22_087200 PF00497 Bacterial extracellular solute-binding proteins, family 3 L3i22_087210 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_087220 PF00005 ABC transporter L3i22_087280 PF01183 Glycosyl hydrolases family 25 L3i22_087290 PF00885 6,7-dimethyl-8-ribityllumazine synthase L3i22_087300 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase L3i22_087300 PF00925 GTP cyclohydrolase II L3i22_087310 PF00677 Lumazine binding domain L3i22_087320 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region L3i22_087320 PF01872 RibD C-terminal domain L3i22_087330 PF00266 Aminotransferase class-V L3i22_087350 PF01553 Acyltransferase L3i22_087360 PF00072 Response regulator receiver domain L3i22_087360 PF00486 Transcriptional regulatory protein, C terminal L3i22_087370 PF00834 Ribulose-phosphate 3 epimerase family L3i22_087390 PF01029 NusB family L3i22_087390 PF01189 16S rRNA methyltransferase RsmB/F L3i22_087400 PF00551 Formyl transferase L3i22_087400 PF02911 Formyl transferase, C-terminal domain L3i22_087410 PF01327 Polypeptide deformylase L3i22_087420 PF17764 3′ DNA-binding domain (3′BD) L3i22_087440 PF00438 S-adenosylmethionine synthetase, N-terminal domain L3i22_087440 PF02772 S-adenosylmethionine synthetase, central domain L3i22_087440 PF02773 S-adenosylmethionine synthetase, C-terminal domain L3i22_087450 PF02441 Flavoprotein L3i22_087450 PF04127 DNA / pantothenate metabolism flavoprotein L3i22_087460 PF01192 RNA polymerase Rpb6 L3i22_087470 PF00625 Guanylate kinase L3i22_087490 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family L3i22_087500 PF00202 Aminotransferase class-III L3i22_087510 PF01180 Dihydroorotate dehydrogenase L3i22_087520 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain L3i22_087520 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain L3i22_087520 PF02142 MGS-like domain L3i22_087530 PF00117 Glutamine amidotransferase class-I L3i22_087530 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain L3i22_087540 PF01979 Amidohydrolase family L3i22_087550 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain L3i22_087550 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain L3i22_087560 PF00156 Phosphoribosyl transferase domain L3i22_087580 PF01029 NusB family L3i22_087590 PF01132 Elongation factor P (EF-P) OB domain L3i22_087590 PF08207 Elongation factor P (EF-P) KOW-like domain L3i22_087590 PF09285 Elongation factor P, C-terminal L3i22_087600 PF01220 Dehydroquinase class II L3i22_087610 PF01761 3-dehydroquinate synthase L3i22_087620 PF01202 Shikimate kinase L3i22_087630 PF01264 Chorismate synthase L3i22_087640 PF08501 Shikimate dehydrogenase substrate binding domain L3i22_087640 PF01488 Shikimate / quinate 5-dehydrogenase L3i22_087640 PF18317 Shikimate 5'-dehydrogenase C-terminal domain L3i22_087670 PF03652 Holliday junction resolvase L3i22_087680 PF02272 DHHA1 domain L3i22_087680 PF01411 tRNA synthetases class II (A) L3i22_087680 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain L3i22_087720 PF00004 ATPase family associated with various cellular activities (AAA) L3i22_087720 PF16193 AAA C-terminal domain L3i22_087720 PF12002 MgsA AAA+ ATPase C terminal L3i22_087780 PF02938 GAD domain L3i22_087780 PF00152 tRNA synthetases class II (D, K and N) L3i22_087780 PF01336 OB-fold nucleic acid binding domain L3i22_087840 PF02838 Glycosyl hydrolase family 20, domain 2 L3i22_087840 PF00728 Glycosyl hydrolase family 20, catalytic domain L3i22_087860 PF01979 Amidohydrolase family L3i22_087870 PF01042 Endoribonuclease L-PSP L3i22_087880 PF00069 Protein kinase domain L3i22_087890 PF00069 Protein kinase domain L3i22_087900 PF00547 Urease, gamma subunit L3i22_087910 PF00699 Urease beta subunit L3i22_087920 PF01979 Amidohydrolase family L3i22_087920 PF00449 Urease alpha-subunit, N-terminal domain L3i22_087930 PF01730 UreF L3i22_087940 PF02492 CobW/HypB/UreG, nucleotide-binding domain L3i22_087950 PF01774 UreD urease accessory protein L3i22_087960 PF04542 Sigma-70 region 2 L3i22_087960 PF04545 Sigma-70, region 4 L3i22_087960 PF04539 Sigma-70 region 3 L3i22_087980 PF03793 PASTA domain L3i22_087980 PF00069 Protein kinase domain L3i22_087990 PF02875 Mur ligase family, glutamate ligase domain L3i22_087990 PF08245 Mur ligase middle domain L3i22_087990 PF08443 RimK-like ATP-grasp domain L3i22_088000 PF03575 Peptidase family S51 L3i22_088020 PF01638 HxlR-like helix-turn-helix L3i22_088060 PF13393 Histidyl-tRNA synthetase L3i22_088060 PF03129 Anticodon binding domain L3i22_088070 PF00753 Metallo-beta-lactamase superfamily L3i22_088100 PF02824 TGS domain L3i22_088100 PF04607 Region found in RelA / SpoT proteins L3i22_088100 PF13291 ACT domain L3i22_088110 PF00156 Phosphoribosyl transferase domain L3i22_088120 PF02355 Protein export membrane protein L3i22_088120 PF07549 SecD/SecF GG Motif L3i22_088130 PF07549 SecD/SecF GG Motif L3i22_088130 PF02355 Protein export membrane protein L3i22_088140 PF02699 Preprotein translocase subunit L3i22_088150 PF17864 RuvB AAA lid domain L3i22_088150 PF05491 RuvB C-terminal winged helix domain L3i22_088150 PF05496 Holliday junction DNA helicase RuvB P-loop domain L3i22_088160 PF01330 RuvA N terminal domain L3i22_088160 PF07499 RuvA, C-terminal domain L3i22_088170 PF02075 Crossover junction endodeoxyribonuclease RuvC L3i22_088190 PF01709 Transcriptional regulator L3i22_088200 PF01174 SNO glutamine amidotransferase family L3i22_088210 PF01680 SOR/SNZ family L3i22_088230 PF13439 Glycosyltransferase Family 4 L3i22_088240 PF03279 Bacterial lipid A biosynthesis acyltransferase L3i22_088250 PF01066 CDP-alcohol phosphatidyltransferase L3i22_088260 PF03144 Elongation factor Tu domain 2 L3i22_088260 PF00009 Elongation factor Tu GTP binding domain L3i22_088260 PF03764 Elongation factor G, domain IV L3i22_088260 PF14492 Elongation Factor G, domain II L3i22_088260 PF00679 Elongation factor G C-terminus L3i22_088270 PF01230 HIT domain L3i22_088280 PF00563 EAL domain L3i22_088280 PF00990 Diguanylate cyclase, GGDEF domain L3i22_088280 PF03707 Bacterial signalling protein N terminal repeat L3i22_088290 PF00563 EAL domain L3i22_088290 PF03707 Bacterial signalling protein N terminal repeat L3i22_088290 PF00990 Diguanylate cyclase, GGDEF domain L3i22_088300 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain L3i22_088300 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) L3i22_088300 PF03129 Anticodon binding domain L3i22_088320 PF00486 Transcriptional regulatory protein, C terminal L3i22_088320 PF00072 Response regulator receiver domain L3i22_088330 PF00512 His Kinase A (phospho-acceptor) domain L3i22_088330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_088330 PF00672 HAMP domain L3i22_088360 PF00962 Adenosine/AMP deaminase L3i22_088380 PF00248 Aldo/keto reductase family L3i22_088400 PF00313 'Cold-shock' DNA-binding domain L3i22_088490 PF00933 Glycosyl hydrolase family 3 N terminal domain L3i22_088490 PF01915 Glycosyl hydrolase family 3 C-terminal domain L3i22_088510 PF00271 Helicase conserved C-terminal domain L3i22_088510 PF00270 DEAD/DEAH box helicase L3i22_088520 PF13649 Methyltransferase domain L3i22_088530 PF00196 Bacterial regulatory proteins, luxR family L3i22_088530 PF00072 Response regulator receiver domain L3i22_088540 PF00753 Metallo-beta-lactamase superfamily L3i22_088580 PF00072 Response regulator receiver domain L3i22_088580 PF00196 Bacterial regulatory proteins, luxR family L3i22_088590 PF07730 Histidine kinase L3i22_088590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_088610 PF00005 ABC transporter L3i22_088620 PF00534 Glycosyl transferases group 1 L3i22_088620 PF13439 Glycosyltransferase Family 4 L3i22_088650 PF03364 Polyketide cyclase / dehydrase and lipid transport L3i22_088690 PF05552 Conserved TM helix L3i22_088710 PF07228 Stage II sporulation protein E (SpoIIE) L3i22_088710 PF08448 PAS fold L3i22_088710 PF13581 Histidine kinase-like ATPase domain L3i22_088710 PF13466 STAS domain L3i22_088730 PF05726 Pirin C-terminal cupin domain L3i22_088730 PF02678 Pirin L3i22_088760 PF00004 ATPase family associated with various cellular activities (AAA) L3i22_088760 PF17871 AAA lid domain L3i22_088760 PF02861 Clp amino terminal domain, pathogenicity island component L3i22_088760 PF10431 C-terminal, D2-small domain, of ClpB protein L3i22_088760 PF07724 AAA domain (Cdc48 subfamily) L3i22_088780 PF02073 Thermophilic metalloprotease (M29) L3i22_088810 PF17200 Single Cache domain 2 L3i22_088810 PF07730 Histidine kinase L3i22_088820 PF00072 Response regulator receiver domain L3i22_088820 PF00196 Bacterial regulatory proteins, luxR family L3i22_088850 PF03561 Allantoicase repeat L3i22_088860 PF01979 Amidohydrolase family L3i22_088910 PF01274 Malate synthase L3i22_088920 PF01979 Amidohydrolase family L3i22_088930 PF01014 Uricase L3i22_088940 PF00576 HIUase/Transthyretin family L3i22_088960 PF08482 ATP-dependent helicase C-terminal L3i22_088960 PF00271 Helicase conserved C-terminal domain L3i22_088960 PF04408 Helicase associated domain (HA2) L3i22_088960 PF00270 DEAD/DEAH box helicase L3i22_088970 PF03707 Bacterial signalling protein N terminal repeat L3i22_088970 PF00990 Diguanylate cyclase, GGDEF domain L3i22_088970 PF00563 EAL domain L3i22_089010 PF01809 Putative membrane protein insertion efficiency factor L3i22_089020 PF00128 Alpha amylase, catalytic domain L3i22_089020 PF11941 Domain of unknown function (DUF3459) L3i22_089030 PF00128 Alpha amylase, catalytic domain L3i22_089040 PF00128 Alpha amylase, catalytic domain L3i22_089040 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) L3i22_089060 PF00534 Glycosyl transferases group 1 L3i22_089060 PF13439 Glycosyltransferase Family 4 L3i22_089070 PF02558 Ketopantoate reductase PanE/ApbA L3i22_089070 PF08546 Ketopantoate reductase PanE/ApbA C terminal L3i22_089090 PF00999 Sodium/hydrogen exchanger family L3i22_089130 PF00756 Putative esterase L3i22_089180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_089180 PF00989 PAS fold L3i22_089180 PF00512 His Kinase A (phospho-acceptor) domain L3i22_089190 PF02390 Putative methyltransferase L3i22_089220 PF08386 TAP-like protein L3i22_089220 PF00561 alpha/beta hydrolase fold L3i22_089230 PF07995 Glucose / Sorbosone dehydrogenase L3i22_089280 PF01494 FAD binding domain L3i22_089320 PF13419 Haloacid dehalogenase-like hydrolase L3i22_089330 PF00296 Luciferase-like monooxygenase L3i22_089350 PF00296 Luciferase-like monooxygenase L3i22_089430 PF00768 D-alanyl-D-alanine carboxypeptidase L3i22_089460 PF04542 Sigma-70 region 2 L3i22_089460 PF04545 Sigma-70, region 4 L3i22_089460 PF04539 Sigma-70 region 3 L3i22_089480 PF13538 UvrD-like helicase C-terminal domain L3i22_089500 PF04545 Sigma-70, region 4 L3i22_089500 PF04542 Sigma-70 region 2 L3i22_089500 PF04539 Sigma-70 region 3 L3i22_089510 PF00270 DEAD/DEAH box helicase L3i22_089510 PF00271 Helicase conserved C-terminal domain L3i22_089570 PF02146 Sir2 family L3i22_089580 PF00356 Bacterial regulatory proteins, lacI family L3i22_089590 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle L3i22_089600 PF00005 ABC transporter L3i22_089600 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L3i22_089610 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_089620 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_089620 PF12911 N-terminal TM domain of oligopeptide transport permease C L3i22_089630 PF00005 ABC transporter L3i22_089630 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L3i22_089640 PF00232 Glycosyl hydrolase family 1 L3i22_089660 PF00990 Diguanylate cyclase, GGDEF domain L3i22_089700 PF01047 MarR family L3i22_089710 PF03989 DNA gyrase C-terminal domain, beta-propeller L3i22_089710 PF00521 DNA gyrase/topoisomerase IV, subunit A L3i22_089720 PF01751 Toprim domain L3i22_089720 PF00204 DNA gyrase B L3i22_089720 PF00986 DNA gyrase B subunit, carboxyl terminus L3i22_089720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_089730 PF00072 Response regulator receiver domain L3i22_089730 PF00211 Adenylate and Guanylate cyclase catalytic domain L3i22_089740 PF00196 Bacterial regulatory proteins, luxR family L3i22_089740 PF00072 Response regulator receiver domain L3i22_089770 PF00512 His Kinase A (phospho-acceptor) domain L3i22_089770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_089770 PF00672 HAMP domain L3i22_089780 PF00072 Response regulator receiver domain L3i22_089780 PF00486 Transcriptional regulatory protein, C terminal L3i22_089790 PF00929 Exonuclease L3i22_089790 PF01541 GIY-YIG catalytic domain L3i22_089810 PF13409 Glutathione S-transferase, N-terminal domain L3i22_089830 PF01047 MarR family L3i22_089840 PF00892 EamA-like transporter family L3i22_089870 PF07728 AAA domain (dynein-related subfamily) L3i22_089900 PF05762 VWA domain containing CoxE-like protein L3i22_089910 PF05154 TM2 domain L3i22_089920 PF08241 Methyltransferase domain L3i22_089960 PF00082 Subtilase family L3i22_090070 PF00709 Adenylosuccinate synthetase L3i22_090130 PF04075 F420H(2)-dependent quinone reductase L3i22_090140 PF00082 Subtilase family L3i22_090140 PF05922 Peptidase inhibitor I9 L3i22_090150 PF00174 Oxidoreductase molybdopterin binding domain L3i22_090160 PF00970 Oxidoreductase FAD-binding domain L3i22_090160 PF00175 Oxidoreductase NAD-binding domain L3i22_090160 PF00111 2Fe-2S iron-sulfur cluster binding domain L3i22_090200 PF05922 Peptidase inhibitor I9 L3i22_090200 PF00082 Subtilase family L3i22_090210 PF16874 Glycosyl hydrolase family 36 C-terminal domain L3i22_090210 PF16875 Glycosyl hydrolase family 36 N-terminal domain L3i22_090220 PF01547 Bacterial extracellular solute-binding protein L3i22_090230 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_090240 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_090250 PF08532 Beta-galactosidase trimerisation domain L3i22_090250 PF02449 Beta-galactosidase L3i22_090250 PF08533 Beta-galactosidase C-terminal domain L3i22_090260 PF00356 Bacterial regulatory proteins, lacI family L3i22_090280 PF13472 GDSL-like Lipase/Acylhydrolase family L3i22_090310 PF00069 Protein kinase domain L3i22_090320 PF08448 PAS fold L3i22_090320 PF00512 His Kinase A (phospho-acceptor) domain L3i22_090320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_090320 PF00072 Response regulator receiver domain L3i22_090320 PF13188 PAS domain L3i22_090330 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase L3i22_090330 PF14572 Phosphoribosyl synthetase-associated domain L3i22_090350 PF00005 ABC transporter L3i22_090390 PF00027 Cyclic nucleotide-binding domain L3i22_090390 PF00005 ABC transporter L3i22_090410 PF03594 Benzoate membrane transport protein L3i22_090420 PF07690 Major Facilitator Superfamily L3i22_090430 PF00440 Bacterial regulatory proteins, tetR family L3i22_090440 PF12849 PBP superfamily domain L3i22_090450 PF00155 Aminotransferase class I and II L3i22_090460 PF00196 Bacterial regulatory proteins, luxR family L3i22_090460 PF00072 Response regulator receiver domain L3i22_090470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_090470 PF07730 Histidine kinase L3i22_090480 PF00005 ABC transporter L3i22_090580 PF17912 MalK OB fold domain L3i22_090580 PF00005 ABC transporter L3i22_090590 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_090600 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_090610 PF01547 Bacterial extracellular solute-binding protein L3i22_090630 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain L3i22_090630 PF02129 X-Pro dipeptidyl-peptidase (S15 family) L3i22_090640 PF00005 ABC transporter L3i22_090640 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L3i22_090650 PF12911 N-terminal TM domain of oligopeptide transport permease C L3i22_090650 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_090660 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_090670 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle L3i22_090680 PF00892 EamA-like transporter family L3i22_090700 PF04686 Streptomyces sporulation and cell division protein, SsgA L3i22_090720 PF02082 Transcriptional regulator L3i22_090760 PF00990 Diguanylate cyclase, GGDEF domain L3i22_090760 PF00072 Response regulator receiver domain L3i22_090770 PF04978 Protein of unknown function (DUF664) L3i22_090780 PF00909 Ammonium Transporter Family L3i22_090800 PF01569 PAP2 superfamily L3i22_090820 PF00781 Diacylglycerol kinase catalytic domain L3i22_090880 PF02983 Alpha-lytic protease prodomain L3i22_090880 PF00089 Trypsin L3i22_090890 PF00072 Response regulator receiver domain L3i22_090890 PF00486 Transcriptional regulatory protein, C terminal L3i22_090900 PF03358 NADPH-dependent FMN reductase L3i22_090910 PF05922 Peptidase inhibitor I9 L3i22_090910 PF00082 Subtilase family L3i22_090920 PF00196 Bacterial regulatory proteins, luxR family L3i22_090920 PF00072 Response regulator receiver domain L3i22_090930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_090930 PF07730 Histidine kinase L3i22_090930 PF05231 MASE1 L3i22_090990 PF03211 Pectate lyase L3i22_091010 PF01965 DJ-1/PfpI family L3i22_091050 PF00294 pfkB family carbohydrate kinase L3i22_091060 PF01081 KDPG and KHG aldolase L3i22_091080 PF00155 Aminotransferase class I and II L3i22_091080 PF00392 Bacterial regulatory proteins, gntR family L3i22_091090 PF01494 FAD binding domain L3i22_091120 PF00128 Alpha amylase, catalytic domain L3i22_091130 PF00534 Glycosyl transferases group 1 L3i22_091140 PF00534 Glycosyl transferases group 1 L3i22_091140 PF13439 Glycosyltransferase Family 4 L3i22_091170 PF13847 Methyltransferase domain L3i22_091170 PF03551 Transcriptional regulator PadR-like family L3i22_091190 PF02894 Oxidoreductase family, C-terminal alpha/beta domain L3i22_091190 PF01408 Oxidoreductase family, NAD-binding Rossmann fold L3i22_091220 PF00704 Glycosyl hydrolases family 18 L3i22_091220 PF00041 Fibronectin type III domain L3i22_091240 PF00128 Alpha amylase, catalytic domain L3i22_091250 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_091260 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_091280 PF00356 Bacterial regulatory proteins, lacI family L3i22_091290 PF17200 Single Cache domain 2 L3i22_091290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L3i22_091290 PF00672 HAMP domain L3i22_091310 PF03301 Tryptophan 2,3-dioxygenase L3i22_091320 PF00266 Aminotransferase class-V L3i22_091350 PF00916 Sulfate permease family L3i22_091350 PF01740 STAS domain L3i22_091360 PF01370 NAD dependent epimerase/dehydratase family L3i22_091370 PF14403 Circularly permuted ATP-grasp type 2 L3i22_091370 PF04107 Glutamate-cysteine ligase family 2(GCS2) L3i22_091380 PF13537 Glutamine amidotransferase domain L3i22_091380 PF00733 Asparagine synthase L3i22_091390 PF00326 Prolyl oligopeptidase family L3i22_091400 PF00004 ATPase family associated with various cellular activities (AAA) L3i22_091400 PF10431 C-terminal, D2-small domain, of ClpB protein L3i22_091400 PF02861 Clp amino terminal domain, pathogenicity island component L3i22_091400 PF17871 AAA lid domain L3i22_091400 PF07724 AAA domain (Cdc48 subfamily) L3i22_091440 PF04072 Leucine carboxyl methyltransferase L3i22_091460 PF00512 His Kinase A (phospho-acceptor) domain L3i22_091460 PF08448 PAS fold L3i22_091460 PF13188 PAS domain L3i22_091460 PF00072 Response regulator receiver domain L3i22_091460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_091470 PF07992 Pyridine nucleotide-disulphide oxidoreductase L3i22_091480 PF01513 ATP-NAD kinase L3i22_091510 PF13847 Methyltransferase domain L3i22_091510 PF03551 Transcriptional regulator PadR-like family L3i22_091560 PF00005 ABC transporter L3i22_091560 PF00664 ABC transporter transmembrane region L3i22_091570 PF00005 ABC transporter L3i22_091570 PF00664 ABC transporter transmembrane region L3i22_091600 PF00196 Bacterial regulatory proteins, luxR family L3i22_091600 PF00072 Response regulator receiver domain L3i22_091610 PF07730 Histidine kinase L3i22_091630 PF00005 ABC transporter L3i22_091630 PF13732 Domain of unknown function (DUF4162) L3i22_091650 PF00005 ABC transporter L3i22_091660 PF00075 RNase H L3i22_091670 PF12802 MarR family L3i22_091710 PF00211 Adenylate and Guanylate cyclase catalytic domain L3i22_091710 PF13191 AAA ATPase domain L3i22_091790 PF00440 Bacterial regulatory proteins, tetR family L3i22_091790 PF13977 BetI-type transcriptional repressor, C-terminal L3i22_091820 PF13298 DNA polymerase Ligase (LigD) L3i22_091820 PF01068 ATP dependent DNA ligase domain L3i22_091820 PF04679 ATP dependent DNA ligase C terminal region L3i22_091840 PF07730 Histidine kinase L3i22_091850 PF00196 Bacterial regulatory proteins, luxR family L3i22_091850 PF00072 Response regulator receiver domain L3i22_091860 PF00563 EAL domain L3i22_091860 PF00990 Diguanylate cyclase, GGDEF domain L3i22_091860 PF08448 PAS fold L3i22_091860 PF08447 PAS fold L3i22_091890 PF00296 Luciferase-like monooxygenase L3i22_091910 PF00011 Hsp20/alpha crystallin family L3i22_091920 PF11799 impB/mucB/samB family C-terminal domain L3i22_091920 PF00817 impB/mucB/samB family L3i22_091930 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases L3i22_091940 PF04542 Sigma-70 region 2 L3i22_091940 PF12680 SnoaL-like domain L3i22_091940 PF08281 Sigma-70, region 4 L3i22_091960 PF02514 CobN/Magnesium Chelatase L3i22_091980 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain L3i22_091980 PF01077 Nitrite and sulphite reductase 4Fe-4S domain L3i22_091990 PF02570 Precorrin-8X methylmutase L3i22_092000 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases L3i22_092030 PF13439 Glycosyltransferase Family 4 L3i22_092030 PF00534 Glycosyl transferases group 1 L3i22_092080 PF00535 Glycosyl transferase family 2 L3i22_092100 PF00848 Ring hydroxylating alpha subunit (catalytic domain) L3i22_092100 PF00355 Rieske [2Fe-2S] domain L3i22_092110 PF01266 FAD dependent oxidoreductase L3i22_092120 PF08669 Glycine cleavage T-protein C-terminal barrel domain L3i22_092120 PF01266 FAD dependent oxidoreductase L3i22_092120 PF16350 FAD dependent oxidoreductase central domain L3i22_092120 PF01571 Aminomethyltransferase folate-binding domain L3i22_092140 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_092150 PF00571 CBS domain L3i22_092150 PF00005 ABC transporter L3i22_092160 PF05199 GMC oxidoreductase L3i22_092160 PF00732 GMC oxidoreductase L3i22_092170 PF03009 Glycerophosphoryl diester phosphodiesterase family L3i22_092190 PF04954 Siderophore-interacting protein L3i22_092190 PF08021 Siderophore-interacting FAD-binding domain L3i22_092200 PF07690 Major Facilitator Superfamily L3i22_092240 PF00400 WD domain, G-beta repeat L3i22_092240 PF12894 Anaphase-promoting complex subunit 4 WD40 domain L3i22_092260 PF00106 short chain dehydrogenase L3i22_092270 PF00857 Isochorismatase family L3i22_092280 PF17837 4'-phosphopantetheinyl transferase N-terminal domain L3i22_092280 PF01648 4'-phosphopantetheinyl transferase superfamily L3i22_092290 PF00356 Bacterial regulatory proteins, lacI family L3i22_092320 PF07944 Beta-L-arabinofuranosidase, GH127 L3i22_092330 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_092340 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_092360 PF00356 Bacterial regulatory proteins, lacI family L3i22_092400 PF00343 Carbohydrate phosphorylase L3i22_092470 PF00388 Phosphatidylinositol-specific phospholipase C, X domain L3i22_092500 PF00484 Carbonic anhydrase L3i22_092510 PF17755 UvrA DNA-binding domain L3i22_092510 PF00005 ABC transporter L3i22_092510 PF17760 UvrA interaction domain L3i22_092520 PF07730 Histidine kinase L3i22_092530 PF00196 Bacterial regulatory proteins, luxR family L3i22_092530 PF00072 Response regulator receiver domain L3i22_092540 PF00873 AcrB/AcrD/AcrF family L3i22_092590 PF02771 Acyl-CoA dehydrogenase, N-terminal domain L3i22_092590 PF00441 Acyl-CoA dehydrogenase, C-terminal domain L3i22_092590 PF02770 Acyl-CoA dehydrogenase, middle domain L3i22_092600 PF08281 Sigma-70, region 4 L3i22_092600 PF04542 Sigma-70 region 2 L3i22_092620 PF00196 Bacterial regulatory proteins, luxR family L3i22_092630 PF07859 alpha/beta hydrolase fold L3i22_092640 PF00196 Bacterial regulatory proteins, luxR family L3i22_092640 PF00072 Response regulator receiver domain L3i22_092650 PF07859 alpha/beta hydrolase fold L3i22_092770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L3i22_092770 PF03466 LysR substrate binding domain L3i22_092800 PF00067 Cytochrome P450 L3i22_092810 PF00155 Aminotransferase class I and II L3i22_092820 PF00378 Enoyl-CoA hydratase/isomerase L3i22_092840 PF00195 Chalcone and stilbene synthases, N-terminal domain L3i22_092840 PF02797 Chalcone and stilbene synthases, C-terminal domain L3i22_092860 PF00891 O-methyltransferase domain L3i22_092870 PF03621 MbtH-like protein L3i22_092880 PF00975 Thioesterase domain L3i22_092880 PF00501 AMP-binding enzyme L3i22_092880 PF00668 Condensation domain L3i22_092880 PF13193 AMP-binding enzyme C-terminal domain L3i22_092880 PF00550 Phosphopantetheine attachment site L3i22_092910 PF00291 Pyridoxal-phosphate dependent enzyme L3i22_092920 PF02423 Ornithine cyclodeaminase/mu-crystallin family L3i22_092960 PF00378 Enoyl-CoA hydratase/isomerase L3i22_092990 PF00067 Cytochrome P450 L3i22_093000 PF07584 Aerotolerance regulator N-terminal L3i22_093000 PF13519 von Willebrand factor type A domain L3i22_093010 PF07584 Aerotolerance regulator N-terminal L3i22_093010 PF00092 von Willebrand factor type A domain L3i22_093020 PF01882 Protein of unknown function DUF58 L3i22_093030 PF17863 AAA lid domain L3i22_093030 PF07726 ATPase family associated with various cellular activities (AAA) L3i22_093040 PF13180 PDZ domain L3i22_093070 PF01266 FAD dependent oxidoreductase L3i22_093110 PF00672 HAMP domain L3i22_093110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_093110 PF18698 Histidine kinase sensor domain L3i22_093110 PF00512 His Kinase A (phospho-acceptor) domain L3i22_093130 PF02424 ApbE family L3i22_093150 PF00970 Oxidoreductase FAD-binding domain L3i22_093150 PF00111 2Fe-2S iron-sulfur cluster binding domain L3i22_093150 PF00175 Oxidoreductase NAD-binding domain L3i22_093160 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases L3i22_093170 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases L3i22_093180 PF02571 Precorrin-6x reductase CbiJ/CobK L3i22_093190 PF13188 PAS domain L3i22_093190 PF00990 Diguanylate cyclase, GGDEF domain L3i22_093190 PF03707 Bacterial signalling protein N terminal repeat L3i22_093190 PF00563 EAL domain L3i22_093220 PF00561 alpha/beta hydrolase fold L3i22_093280 PF16483 Beta-1,3-glucanase L3i22_093280 PF00652 Ricin-type beta-trefoil lectin domain L3i22_093290 PF06964 Alpha-L-arabinofuranosidase C-terminal domain L3i22_093300 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_093310 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_093320 PF01547 Bacterial extracellular solute-binding protein L3i22_093330 PF00356 Bacterial regulatory proteins, lacI family L3i22_093360 PF12806 Acetyl-CoA dehydrogenase C-terminal like L3i22_093360 PF02770 Acyl-CoA dehydrogenase, middle domain L3i22_093360 PF02771 Acyl-CoA dehydrogenase, N-terminal domain L3i22_093360 PF00441 Acyl-CoA dehydrogenase, C-terminal domain L3i22_093370 PF08448 PAS fold L3i22_093370 PF08447 PAS fold L3i22_093370 PF00563 EAL domain L3i22_093370 PF00990 Diguanylate cyclase, GGDEF domain L3i22_093420 PF00196 Bacterial regulatory proteins, luxR family L3i22_093420 PF00072 Response regulator receiver domain L3i22_093440 PF00487 Fatty acid desaturase L3i22_093460 PF08240 Alcohol dehydrogenase GroES-like domain L3i22_093460 PF16197 Ketoacyl-synthetase C-terminal extension L3i22_093460 PF00109 Beta-ketoacyl synthase, N-terminal domain L3i22_093460 PF00698 Acyl transferase domain L3i22_093460 PF00550 Phosphopantetheine attachment site L3i22_093460 PF02801 Beta-ketoacyl synthase, C-terminal domain L3i22_093460 PF14765 Polyketide synthase dehydratase L3i22_093460 PF08659 KR domain L3i22_093470 PF03176 MMPL family L3i22_093490 PF13193 AMP-binding enzyme C-terminal domain L3i22_093490 PF00501 AMP-binding enzyme L3i22_093510 PF05199 GMC oxidoreductase L3i22_093540 PF11774 Lsr2 L3i22_093560 PF00990 Diguanylate cyclase, GGDEF domain L3i22_093560 PF03707 Bacterial signalling protein N terminal repeat L3i22_093560 PF00563 EAL domain L3i22_093610 PF00155 Aminotransferase class I and II L3i22_093620 PF04055 Radical SAM superfamily L3i22_093620 PF06968 Biotin and Thiamin Synthesis associated domain L3i22_093680 PF12320 Type 5 capsule protein repressor C-terminal domain L3i22_093680 PF00149 Calcineurin-like phosphoesterase L3i22_093690 PF13476 AAA domain L3i22_093710 PF04542 Sigma-70 region 2 L3i22_093710 PF04545 Sigma-70, region 4 L3i22_093770 PF00781 Diacylglycerol kinase catalytic domain L3i22_093800 PF12706 Beta-lactamase superfamily domain L3i22_093820 PF01966 HD domain L3i22_093820 PF13286 Phosphohydrolase-associated domain L3i22_093910 PF04679 ATP dependent DNA ligase C terminal region L3i22_093910 PF01068 ATP dependent DNA ligase domain L3i22_093920 PF00561 alpha/beta hydrolase fold L3i22_093970 PF01641 SelR domain L3i22_093980 PF00186 Dihydrofolate reductase L3i22_093990 PF00303 Thymidylate synthase L3i22_094000 PF03358 NADPH-dependent FMN reductase L3i22_094020 PF13673 Acetyltransferase (GNAT) domain L3i22_094030 PF06778 Chlorite dismutase L3i22_094040 PF01593 Flavin containing amine oxidoreductase L3i22_094050 PF01208 Uroporphyrinogen decarboxylase (URO-D) L3i22_094070 PF13180 PDZ domain L3i22_094080 PF01612 3'-5' exonuclease L3i22_094080 PF00570 HRDC domain L3i22_094090 PF02803 Thiolase, C-terminal domain L3i22_094090 PF00108 Thiolase, N-terminal domain L3i22_094100 PF00378 Enoyl-CoA hydratase/isomerase L3i22_094100 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain L3i22_094100 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain L3i22_094120 PF00672 HAMP domain L3i22_094120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_094120 PF00512 His Kinase A (phospho-acceptor) domain L3i22_094130 PF00072 Response regulator receiver domain L3i22_094130 PF00486 Transcriptional regulatory protein, C terminal L3i22_094170 PF02780 Transketolase, C-terminal domain L3i22_094170 PF02779 Transketolase, pyrimidine binding domain L3i22_094170 PF13292 1-deoxy-D-xylulose-5-phosphate synthase L3i22_094180 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain L3i22_094180 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain L3i22_094190 PF01938 TRAM domain L3i22_094190 PF05958 tRNA (Uracil-5-)-methyltransferase L3i22_094200 PF13520 Amino acid permease L3i22_094210 PF02080 TrkA-C domain L3i22_094210 PF02254 TrkA-N domain L3i22_094220 PF02080 TrkA-C domain L3i22_094220 PF02254 TrkA-N domain L3i22_094260 PF00692 dUTPase L3i22_094310 PF00459 Inositol monophosphatase family L3i22_094320 PF04545 Sigma-70, region 4 L3i22_094320 PF00140 Sigma-70 factor, region 1.2 L3i22_094320 PF04539 Sigma-70 region 3 L3i22_094320 PF04542 Sigma-70 region 2 L3i22_094340 PF08448 PAS fold L3i22_094340 PF00990 Diguanylate cyclase, GGDEF domain L3i22_094350 PF04851 Type III restriction enzyme, res subunit L3i22_094360 PF03458 UPF0126 domain L3i22_094380 PF04227 Indigoidine synthase A like protein L3i22_094480 PF01627 Hpt domain L3i22_094480 PF01584 CheW-like domain L3i22_094480 PF02895 Signal transducing histidine kinase, homodimeric domain L3i22_094480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_094480 PF07194 P2 response regulator binding domain L3i22_094490 PF01584 CheW-like domain L3i22_094500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L3i22_094500 PF00672 HAMP domain L3i22_094510 PF02580 D-Tyr-tRNA(Tyr) deacylase L3i22_094530 PF04545 Sigma-70, region 4 L3i22_094530 PF00140 Sigma-70 factor, region 1.2 L3i22_094530 PF04539 Sigma-70 region 3 L3i22_094530 PF04542 Sigma-70 region 2 L3i22_094540 PF13607 Succinyl-CoA ligase like flavodoxin domain L3i22_094540 PF13380 CoA binding domain L3i22_094550 PF00850 Histone deacetylase domain L3i22_094560 PF18357 Diphteria toxin repressor SH3 domain L3i22_094560 PF02742 Iron dependent repressor, metal binding and dimerisation domain L3i22_094560 PF01325 Iron dependent repressor, N-terminal DNA binding domain L3i22_094590 PF12697 Alpha/beta hydrolase family L3i22_094600 PF07690 Major Facilitator Superfamily L3i22_094620 PF02867 Ribonucleotide reductase, barrel domain L3i22_094620 PF08471 Class II vitamin B12-dependent ribonucleotide reductase L3i22_094630 PF03477 ATP cone domain L3i22_094640 PF01726 LexA DNA binding domain L3i22_094640 PF00717 Peptidase S24-like L3i22_094660 PF16360 GTP-binding GTPase Middle Region L3i22_094660 PF13167 GTP-binding GTPase N-terminal L3i22_094660 PF01926 50S ribosome-binding GTPase L3i22_094670 PF00390 Malic enzyme, N-terminal domain L3i22_094670 PF03949 Malic enzyme, NAD binding domain L3i22_094680 PF00665 Integrase core domain L3i22_094680 PF13936 Helix-turn-helix domain L3i22_094690 PF03009 Glycerophosphoryl diester phosphodiesterase family L3i22_094700 PF01678 Diaminopimelate epimerase L3i22_094720 PF03993 Domain of Unknown Function (DUF349) L3i22_094770 PF01266 FAD dependent oxidoreductase L3i22_094810 PF13291 ACT domain L3i22_094810 PF00291 Pyridoxal-phosphate dependent enzyme L3i22_094820 PF03466 LysR substrate binding domain L3i22_094820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L3i22_094830 PF00919 Uncharacterized protein family UPF0004 L3i22_094830 PF04055 Radical SAM superfamily L3i22_094850 PF00005 ABC transporter L3i22_094860 PF00497 Bacterial extracellular solute-binding proteins, family 3 L3i22_094870 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_094880 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_094890 PF12072 Domain of unknown function (DUF3552) L3i22_094890 PF00013 KH domain L3i22_094890 PF01966 HD domain L3i22_094900 PF02631 RecX family L3i22_094910 PF00154 recA bacterial DNA recombination protein L3i22_094930 PF03167 Uracil DNA glycosylase superfamily L3i22_094940 PF00392 Bacterial regulatory proteins, gntR family L3i22_094940 PF00155 Aminotransferase class I and II L3i22_094960 PF01810 LysE type translocator L3i22_094970 PF03793 PASTA domain L3i22_094970 PF00069 Protein kinase domain L3i22_094980 PF00270 DEAD/DEAH box helicase L3i22_094980 PF00271 Helicase conserved C-terminal domain L3i22_094980 PF08494 DEAD/H associated L3i22_095020 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain L3i22_095020 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain L3i22_095040 PF04012 PspA/IM30 family L3i22_095060 PF02464 Competence-damaged protein L3i22_095060 PF00994 Probable molybdopterin binding domain L3i22_095060 PF18146 Damage-inducible protein CinA KH domain L3i22_095070 PF01066 CDP-alcohol phosphatidyltransferase L3i22_095080 PF00919 Uncharacterized protein family UPF0004 L3i22_095080 PF04055 Radical SAM superfamily L3i22_095080 PF18693 TRAM domain L3i22_095110 PF17854 FtsK alpha domain L3i22_095110 PF01580 FtsK/SpoIIIE family L3i22_095110 PF09397 Ftsk gamma domain L3i22_095140 PF02983 Alpha-lytic protease prodomain L3i22_095150 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain L3i22_095150 PF12706 Beta-lactamase superfamily domain L3i22_095150 PF17770 Ribonuclease J C-terminal domain L3i22_095160 PF00701 Dihydrodipicolinate synthetase family L3i22_095180 PF06224 Winged helix DNA-binding domain L3i22_095190 PF00583 Acetyltransferase (GNAT) family L3i22_095210 PF01113 Dihydrodipicolinate reductase, N-terminus L3i22_095210 PF05173 Dihydrodipicolinate reductase, C-terminus L3i22_095230 PF00675 Insulinase (Peptidase family M16) L3i22_095230 PF05193 Peptidase M16 inactive domain L3i22_095240 PF00575 S1 RNA binding domain L3i22_095240 PF00013 KH domain L3i22_095240 PF01138 3' exoribonuclease family, domain 1 L3i22_095240 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain L3i22_095250 PF00312 Ribosomal protein S15 L3i22_095260 PF06574 FAD synthetase L3i22_095260 PF01687 Riboflavin kinase L3i22_095270 PF00512 His Kinase A (phospho-acceptor) domain L3i22_095270 PF01627 Hpt domain L3i22_095270 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) L3i22_095270 PF00672 HAMP domain L3i22_095270 PF00072 Response regulator receiver domain L3i22_095270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_095280 PF00072 Response regulator receiver domain L3i22_095280 PF00989 PAS fold L3i22_095280 PF01627 Hpt domain L3i22_095280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_095280 PF00512 His Kinase A (phospho-acceptor) domain L3i22_095280 PF18415 Histidine kinase receptor ArcB trans-membrane domain L3i22_095290 PF00563 EAL domain L3i22_095290 PF00990 Diguanylate cyclase, GGDEF domain L3i22_095290 PF03707 Bacterial signalling protein N terminal repeat L3i22_095290 PF13188 PAS domain L3i22_095300 PF16198 tRNA pseudouridylate synthase B C-terminal domain L3i22_095300 PF01509 TruB family pseudouridylate synthase (N terminal domain) L3i22_095300 PF09142 tRNA Pseudouridine synthase II, C terminal L3i22_095330 PF01368 DHH family L3i22_095330 PF02272 DHHA1 domain L3i22_095340 PF02033 Ribosome-binding factor A L3i22_095360 PF08241 Methyltransferase domain L3i22_095370 PF11987 Translation-initiation factor 2 L3i22_095370 PF04760 Translation initiation factor IF-2, N-terminal region L3i22_095370 PF00009 Elongation factor Tu GTP binding domain L3i22_095390 PF08529 NusA N-terminal domain L3i22_095390 PF13184 NusA-like KH domain L3i22_095400 PF02576 RimP N-terminal domain L3i22_095400 PF17384 RimP C-terminal SH3 domain L3i22_095440 PF00557 Metallopeptidase family M24 L3i22_095460 PF13581 Histidine kinase-like ATPase domain L3i22_095460 PF08448 PAS fold L3i22_095460 PF07228 Stage II sporulation protein E (SpoIIE) L3i22_095460 PF13466 STAS domain L3i22_095470 PF07722 Peptidase C26 L3i22_095480 PF07722 Peptidase C26 L3i22_095500 PF00171 Aldehyde dehydrogenase family L3i22_095510 PF00120 Glutamine synthetase, catalytic domain L3i22_095540 PF13732 Domain of unknown function (DUF4162) L3i22_095540 PF00005 ABC transporter L3i22_095550 PF00072 Response regulator receiver domain L3i22_095550 PF00196 Bacterial regulatory proteins, luxR family L3i22_095560 PF05384 Sensor protein DegS L3i22_095560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_095560 PF07730 Histidine kinase L3i22_095600 PF08359 YsiA-like protein, C-terminal region L3i22_095600 PF00440 Bacterial regulatory proteins, tetR family L3i22_095620 PF00005 ABC transporter L3i22_095670 PF00583 Acetyltransferase (GNAT) family L3i22_095680 PF04551 GcpE protein L3i22_095690 PF17820 PDZ domain L3i22_095690 PF02163 Peptidase family M50 L3i22_095700 PF13288 DXP reductoisomerase C-terminal domain L3i22_095700 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase L3i22_095700 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain L3i22_095740 PF00355 Rieske [2Fe-2S] domain L3i22_095770 PF04055 Radical SAM superfamily L3i22_095790 PF01765 Ribosome recycling factor L3i22_095800 PF00696 Amino acid kinase family L3i22_095810 PF00889 Elongation factor TS L3i22_095820 PF00318 Ribosomal protein S2 L3i22_095840 PF02021 Uncharacterised protein family UPF0102 L3i22_095850 PF13335 Magnesium chelatase, subunit ChlI C-terminal L3i22_095850 PF01078 Magnesium chelatase, subunit ChlI L3i22_095860 PF02481 DNA recombination-mediator protein A L3i22_095860 PF17782 DprA winged helix domain L3i22_095900 PF07702 UTRA domain L3i22_095900 PF00392 Bacterial regulatory proteins, gntR family L3i22_095910 PF00589 Phage integrase family L3i22_095910 PF02899 Phage integrase, N-terminal SAM-like domain L3i22_095920 PF00266 Aminotransferase class-V L3i22_095930 PF10611 Protein of unknown function (DUF2469) L3i22_095940 PF01351 Ribonuclease HII L3i22_095950 PF00293 NUDIX domain L3i22_095960 PF10502 Signal peptidase, peptidase S26 L3i22_095970 PF10502 Signal peptidase, peptidase S26 L3i22_095980 PF01245 Ribosomal protein L19 L3i22_095990 PF01746 tRNA (Guanine-1)-methyltransferase L3i22_096000 PF05239 PRC-barrel domain L3i22_096000 PF01782 RimM N-terminal domain L3i22_096020 PF00886 Ribosomal protein S16 L3i22_096030 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) L3i22_096030 PF03129 Anticodon binding domain L3i22_096040 PF04542 Sigma-70 region 2 L3i22_096040 PF08281 Sigma-70, region 4 L3i22_096060 PF01979 Amidohydrolase family L3i22_096080 PF00448 SRP54-type protein, GTPase domain L3i22_096080 PF02881 SRP54-type protein, helical bundle domain L3i22_096080 PF02978 Signal peptide binding domain L3i22_096100 PF17103 Stealth protein CR4, conserved region 4 L3i22_096100 PF17102 Stealth protein CR3, conserved region 3 L3i22_096100 PF11380 Stealth protein CR2, conserved region 2 L3i22_096100 PF17101 Stealth protein CR1, conserved region 1 L3i22_096110 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain L3i22_096110 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain L3i22_096110 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain L3i22_096130 PF00535 Glycosyl transferase family 2 L3i22_096150 PF01757 Acyltransferase family L3i22_096220 PF00535 Glycosyl transferase family 2 L3i22_096230 PF01966 HD domain L3i22_096230 PF08335 GlnD PII-uridylyltransferase L3i22_096230 PF01909 Nucleotidyltransferase domain L3i22_096240 PF00543 Nitrogen regulatory protein P-II L3i22_096250 PF00909 Ammonium Transporter Family L3i22_096270 PF00448 SRP54-type protein, GTPase domain L3i22_096270 PF02881 SRP54-type protein, helical bundle domain L3i22_096290 PF04978 Protein of unknown function (DUF664) L3i22_096320 PF02463 RecF/RecN/SMC N terminal domain L3i22_096320 PF06470 SMC proteins Flexible Hinge Domain L3i22_096350 PF00534 Glycosyl transferases group 1 L3i22_096380 PF06827 Zinc finger found in FPG and IleRS L3i22_096380 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain L3i22_096380 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain L3i22_096400 PF14622 Ribonuclease-III-like L3i22_096400 PF00035 Double-stranded RNA binding motif L3i22_096410 PF02504 Fatty acid synthesis protein L3i22_096430 PF02620 Large ribosomal RNA subunit accumulation protein YceD L3i22_096450 PF01467 Cytidylyltransferase-like L3i22_096500 PF17191 RecG wedge domain L3i22_096500 PF00270 DEAD/DEAH box helicase L3i22_096500 PF00271 Helicase conserved C-terminal domain L3i22_096510 PF13684 Dihydroxyacetone kinase family L3i22_096510 PF02734 DAK2 domain L3i22_096520 PF00830 Ribosomal L28 family L3i22_096550 PF02769 AIR synthase related protein, C-terminal domain L3i22_096550 PF00586 AIR synthase related protein, N-terminal domain L3i22_096580 PF01820 D-ala D-ala ligase N-terminus L3i22_096580 PF07478 D-ala D-ala ligase C-terminus L3i22_096610 PF01053 Cys/Met metabolism PLP-dependent enzyme L3i22_096620 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus L3i22_096620 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus L3i22_096630 PF00501 AMP-binding enzyme L3i22_096630 PF01553 Acyltransferase L3i22_096640 PF12804 MobA-like NTP transferase domain L3i22_096660 PF13089 Polyphosphate kinase N-terminal domain L3i22_096660 PF13090 Polyphosphate kinase C-terminal domain 2 L3i22_096660 PF02503 Polyphosphate kinase middle domain L3i22_096660 PF17941 Polyphosphate kinase C-terminal domain 1 L3i22_096670 PF00293 NUDIX domain L3i22_096670 PF00300 Histidine phosphatase superfamily (branch 1) L3i22_096690 PF00216 Bacterial DNA-binding protein L3i22_096700 PF00694 Aconitase C-terminal domain L3i22_096710 PF00330 Aconitase family (aconitate hydratase) L3i22_096730 PF00753 Metallo-beta-lactamase superfamily L3i22_096750 PF01557 Fumarylacetoacetate (FAA) hydrolase family L3i22_096760 PF01381 Helix-turn-helix L3i22_096780 PF00005 ABC transporter L3i22_096820 PF00682 HMGL-like L3i22_096820 PF08502 LeuA allosteric (dimerisation) domain L3i22_096830 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) L3i22_096830 PF03129 Anticodon binding domain L3i22_096830 PF02824 TGS domain L3i22_096830 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain L3i22_096840 PF13302 Acetyltransferase (GNAT) domain L3i22_096880 PF00472 RF-1 domain L3i22_096890 PF01063 Amino-transferase class IV L3i22_096900 PF00180 Isocitrate/isopropylmalate dehydrogenase L3i22_096920 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain L3i22_096920 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain L3i22_096920 PF01842 ACT domain L3i22_096930 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain L3i22_096930 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain L3i22_096940 PF10369 Small subunit of acetolactate synthase L3i22_096950 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain L3i22_096950 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain L3i22_096950 PF00205 Thiamine pyrophosphate enzyme, central domain L3i22_096960 PF00563 EAL domain L3i22_096960 PF13188 PAS domain L3i22_096960 PF00990 Diguanylate cyclase, GGDEF domain L3i22_096960 PF03707 Bacterial signalling protein N terminal repeat L3i22_096970 PF00920 Dehydratase family L3i22_097010 PF00394 Multicopper oxidase L3i22_097010 PF07731 Multicopper oxidase L3i22_097010 PF07732 Multicopper oxidase L3i22_097020 PF14765 Polyketide synthase dehydratase L3i22_097020 PF00550 Phosphopantetheine attachment site L3i22_097020 PF08659 KR domain L3i22_097020 PF02801 Beta-ketoacyl synthase, C-terminal domain L3i22_097020 PF16197 Ketoacyl-synthetase C-terminal extension L3i22_097020 PF00107 Zinc-binding dehydrogenase L3i22_097020 PF08240 Alcohol dehydrogenase GroES-like domain L3i22_097020 PF00698 Acyl transferase domain L3i22_097020 PF00109 Beta-ketoacyl synthase, N-terminal domain L3i22_097050 PF00356 Bacterial regulatory proteins, lacI family L3i22_097060 PF03707 Bacterial signalling protein N terminal repeat L3i22_097060 PF00563 EAL domain L3i22_097060 PF00990 Diguanylate cyclase, GGDEF domain L3i22_097080 PF07995 Glucose / Sorbosone dehydrogenase L3i22_097110 PF02637 GatB domain L3i22_097110 PF02934 GatB/GatE catalytic domain L3i22_097120 PF01433 Peptidase family M1 domain L3i22_097120 PF11838 ERAP1-like C-terminal domain L3i22_097130 PF01425 Amidase L3i22_097140 PF02686 Glu-tRNAGln amidotransferase C subunit L3i22_097150 PF00990 Diguanylate cyclase, GGDEF domain L3i22_097150 PF03707 Bacterial signalling protein N terminal repeat L3i22_097150 PF00563 EAL domain L3i22_097160 PF00533 BRCA1 C Terminus (BRCT) domain L3i22_097160 PF01653 NAD-dependent DNA ligase adenylation domain L3i22_097160 PF03120 NAD-dependent DNA ligase OB-fold domain L3i22_097160 PF03119 NAD-dependent DNA ligase C4 zinc finger domain L3i22_097160 PF12826 Helix-hairpin-helix motif L3i22_097190 PF00266 Aminotransferase class-V L3i22_097200 PF00766 Electron transfer flavoprotein FAD-binding domain L3i22_097200 PF01012 Electron transfer flavoprotein domain L3i22_097210 PF01012 Electron transfer flavoprotein domain L3i22_097220 PF02656 Domain of unknown function (DUF202) L3i22_097250 PF00205 Thiamine pyrophosphate enzyme, central domain L3i22_097250 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain L3i22_097250 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain L3i22_097260 PF00012 Hsp70 protein L3i22_097270 PF00378 Enoyl-CoA hydratase/isomerase L3i22_097300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L3i22_097300 PF08447 PAS fold L3i22_097310 PF00672 HAMP domain L3i22_097310 PF12729 Four helix bundle sensory module for signal transduction L3i22_097310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L3i22_097320 PF00294 pfkB family carbohydrate kinase L3i22_097330 PF00005 ABC transporter L3i22_097350 PF00933 Glycosyl hydrolase family 3 N terminal domain L3i22_097370 PF05088 Bacterial NAD-glutamate dehydrogenase L3i22_097380 PF00905 Penicillin binding protein transpeptidase domain L3i22_097390 PF00491 Arginase family L3i22_097400 PF00085 Thioredoxin L3i22_097410 PF01494 FAD binding domain L3i22_097440 PF00106 short chain dehydrogenase L3i22_097450 PF02803 Thiolase, C-terminal domain L3i22_097450 PF00108 Thiolase, N-terminal domain L3i22_097520 PF00171 Aldehyde dehydrogenase family L3i22_097530 PF00005 ABC transporter L3i22_097530 PF09383 NIL domain L3i22_097560 PF01939 Endonuclease NucS L3i22_097590 PF12538 DNA transporter L3i22_097590 PF01580 FtsK/SpoIIIE family L3i22_097610 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain L3i22_097610 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain L3i22_097630 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) L3i22_097640 PF01923 Cobalamin adenosyltransferase L3i22_097660 PF02567 Phenazine biosynthesis-like protein L3i22_097680 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain L3i22_097700 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain L3i22_097700 PF02874 ATP synthase alpha/beta family, beta-barrel domain L3i22_097710 PF00231 ATP synthase L3i22_097720 PF00306 ATP synthase alpha/beta chain, C terminal domain L3i22_097720 PF02874 ATP synthase alpha/beta family, beta-barrel domain L3i22_097720 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain L3i22_097730 PF00213 ATP synthase delta (OSCP) subunit L3i22_097740 PF00430 ATP synthase B/B' CF(0) L3i22_097750 PF00137 ATP synthase subunit C L3i22_097760 PF00119 ATP synthase A chain L3i22_097790 PF00464 Serine hydroxymethyltransferase L3i22_097800 PF11066 Protein of unknown function (DUF2867) L3i22_097800 PF13460 NAD(P)H-binding L3i22_097810 PF01300 Telomere recombination L3i22_097810 PF03481 Putative GTP-binding controlling metal-binding L3i22_097820 PF01451 Low molecular weight phosphotyrosine protein phosphatase L3i22_097830 PF01300 Telomere recombination L3i22_097840 PF05175 Methyltransferase small domain L3i22_097840 PF17827 PrmC N-terminal domain L3i22_097870 PF03462 PCRF domain L3i22_097870 PF00472 RF-1 domain L3i22_097880 PF01197 Ribosomal protein L31 L3i22_097930 PF02898 Nitric oxide synthase, oxygenase domain L3i22_097940 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain L3i22_097940 PF07498 Rho termination factor, N-terminal domain L3i22_097940 PF07497 Rho termination factor, RNA-binding domain L3i22_097950 PF00288 GHMP kinases N terminal domain L3i22_097970 PF00873 AcrB/AcrD/AcrF family L3i22_097990 PF00291 Pyridoxal-phosphate dependent enzyme L3i22_098010 PF00742 Homoserine dehydrogenase L3i22_098010 PF03447 Homoserine dehydrogenase, NAD binding domain L3i22_098010 PF01842 ACT domain L3i22_098020 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain L3i22_098020 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain L3i22_098030 PF03485 Arginyl tRNA synthetase N terminal domain L3i22_098030 PF05746 DALR anticodon binding domain L3i22_098030 PF00750 tRNA synthetases class I (R) L3i22_098060 PF10502 Signal peptidase, peptidase S26 L3i22_098070 PF08264 Anticodon-binding domain of tRNA L3i22_098070 PF00133 tRNA synthetases class I (I, L, M and V) L3i22_098080 PF00890 FAD binding domain L3i22_098090 PF01522 Polysaccharide deacetylase L3i22_098110 PF02839 Carbohydrate binding domain L3i22_098150 PF00069 Protein kinase domain L3i22_098150 PF03793 PASTA domain L3i22_098190 PF01638 HxlR-like helix-turn-helix L3i22_098220 PF07690 Major Facilitator Superfamily L3i22_098240 PF14525 AraC-binding-like domain L3i22_098240 PF12833 Helix-turn-helix domain L3i22_098270 PF01408 Oxidoreductase family, NAD-binding Rossmann fold L3i22_098270 PF02894 Oxidoreductase family, C-terminal alpha/beta domain L3i22_098310 PF03738 Glutathionylspermidine synthase preATP-grasp L3i22_098340 PF00128 Alpha amylase, catalytic domain L3i22_098340 PF16657 Maltogenic Amylase, C-terminal domain L3i22_098370 PF09335 SNARE associated Golgi protein L3i22_098410 PF00196 Bacterial regulatory proteins, luxR family L3i22_098430 PF00041 Fibronectin type III domain L3i22_098430 PF00704 Glycosyl hydrolases family 18 L3i22_098460 PF02096 60Kd inner membrane protein L3i22_098460 PF14849 YidC periplasmic domain L3i22_098480 PF04107 Glutamate-cysteine ligase family 2(GCS2) L3i22_098490 PF01522 Polysaccharide deacetylase L3i22_098500 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain L3i22_098500 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain L3i22_098500 PF06827 Zinc finger found in FPG and IleRS L3i22_098510 PF00574 Clp protease L3i22_098540 PF00202 Aminotransferase class-III L3i22_098590 PF09278 MerR, DNA binding L3i22_098590 PF00376 MerR family regulatory protein L3i22_098600 PF08534 Redoxin L3i22_098630 PF13180 PDZ domain L3i22_098640 PF00672 HAMP domain L3i22_098640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_098640 PF00512 His Kinase A (phospho-acceptor) domain L3i22_098650 PF00072 Response regulator receiver domain L3i22_098650 PF00486 Transcriptional regulatory protein, C terminal L3i22_098680 PF16870 2-oxoglutarate dehydrogenase C-terminal L3i22_098680 PF00676 Dehydrogenase E1 component L3i22_098680 PF16078 2-oxoglutarate dehydrogenase N-terminus L3i22_098680 PF02779 Transketolase, pyrimidine binding domain L3i22_098680 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) L3i22_098700 PF07085 DRTGG domain L3i22_098700 PF01515 Phosphate acetyl/butaryl transferase L3i22_098710 PF00871 Acetokinase family L3i22_098740 PF03949 Malic enzyme, NAD binding domain L3i22_098740 PF00390 Malic enzyme, N-terminal domain L3i22_098760 PF09055 Nickel-containing superoxide dismutase L3i22_098770 PF13581 Histidine kinase-like ATPase domain L3i22_098780 PF07702 UTRA domain L3i22_098780 PF00392 Bacterial regulatory proteins, gntR family L3i22_098800 PF00781 Diacylglycerol kinase catalytic domain L3i22_098810 PF02467 Transcription factor WhiB L3i22_098840 PF01507 Phosphoadenosine phosphosulfate reductase family L3i22_098860 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain L3i22_098860 PF01077 Nitrite and sulphite reductase 4Fe-4S domain L3i22_098880 PF07568 Histidine kinase L3i22_098880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_098880 PF12282 Signal transduction histidine kinase L3i22_098890 PF01380 SIS domain L3i22_098910 PF00364 Biotin-requiring enzyme L3i22_098920 PF13490 Putative zinc-finger L3i22_098930 PF08281 Sigma-70, region 4 L3i22_098930 PF04542 Sigma-70 region 2 L3i22_098960 PF02586 SOS response associated peptidase (SRAP) L3i22_098970 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) L3i22_098980 PF03193 RsgA GTPase L3i22_098990 PF00459 Inositol monophosphatase family L3i22_099030 PF00722 Glycosyl hydrolases family 16 L3i22_099040 PF01374 Glycosyl hydrolase family 46 L3i22_099060 PF02446 4-alpha-glucanotransferase L3i22_099130 PF03741 Integral membrane protein TerC family L3i22_099140 PF00805 Pentapeptide repeats (8 copies) L3i22_099170 PF07690 Major Facilitator Superfamily L3i22_099180 PF01047 MarR family L3i22_099190 PF07690 Major Facilitator Superfamily L3i22_099230 PF03699 Uncharacterised protein family (UPF0182) L3i22_099240 PF05362 Lon protease (S16) C-terminal proteolytic domain L3i22_099240 PF13180 PDZ domain L3i22_099300 PF03109 ABC1 family L3i22_099320 PF02178 AT hook motif L3i22_099320 PF02467 Transcription factor WhiB L3i22_099340 PF00580 UvrD/REP helicase N-terminal domain L3i22_099340 PF13361 UvrD-like helicase C-terminal domain L3i22_099340 PF00570 HRDC domain L3i22_099350 PF00462 Glutaredoxin L3i22_099370 PF00293 NUDIX domain L3i22_099370 PF09297 NADH pyrophosphatase zinc ribbon domain L3i22_099370 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain L3i22_099400 PF02082 Transcriptional regulator L3i22_099420 PF00005 ABC transporter L3i22_099430 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_099460 PF01596 O-methyltransferase L3i22_099470 PF00313 'Cold-shock' DNA-binding domain L3i22_099490 PF00580 UvrD/REP helicase N-terminal domain L3i22_099490 PF13361 UvrD-like helicase C-terminal domain L3i22_099500 PF00580 UvrD/REP helicase N-terminal domain L3i22_099500 PF12705 PD-(D/E)XK nuclease superfamily L3i22_099500 PF13361 UvrD-like helicase C-terminal domain L3i22_099510 PF03641 Possible lysine decarboxylase L3i22_099520 PF03641 Possible lysine decarboxylase L3i22_099540 PF07687 Peptidase dimerisation domain L3i22_099540 PF01546 Peptidase family M20/M25/M40 L3i22_099550 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle L3i22_099550 PF14602 Hexapeptide repeat of succinyl-transferase L3i22_099560 PF03466 LysR substrate binding domain L3i22_099560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L3i22_099570 PF01810 LysE type translocator L3i22_099590 PF13847 Methyltransferase domain L3i22_099650 PF00106 short chain dehydrogenase L3i22_099680 PF00155 Aminotransferase class I and II L3i22_099690 PF00037 4Fe-4S binding domain L3i22_099700 PF00583 Acetyltransferase (GNAT) family L3i22_099730 PF02585 GlcNAc-PI de-N-acetylase L3i22_099740 PF00326 Prolyl oligopeptidase family L3i22_099740 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region L3i22_099780 PF00890 FAD binding domain L3i22_099780 PF02910 Fumarate reductase flavoprotein C-term L3i22_099790 PF13183 4Fe-4S dicluster domain L3i22_099790 PF13085 2Fe-2S iron-sulfur cluster binding domain L3i22_099820 PF02909 Tetracyclin repressor-like, C-terminal domain L3i22_099820 PF00440 Bacterial regulatory proteins, tetR family L3i22_099830 PF07690 Major Facilitator Superfamily L3i22_099860 PF00005 ABC transporter L3i22_099860 PF12399 Branched-chain amino acid ATP-binding cassette transporter L3i22_099870 PF00005 ABC transporter L3i22_099890 PF02653 Branched-chain amino acid transport system / permease component L3i22_099890 PF11862 Domain of unknown function (DUF3382) L3i22_099920 PF00106 short chain dehydrogenase L3i22_099940 PF00441 Acyl-CoA dehydrogenase, C-terminal domain L3i22_099940 PF02770 Acyl-CoA dehydrogenase, middle domain L3i22_099940 PF02771 Acyl-CoA dehydrogenase, N-terminal domain L3i22_099960 PF00196 Bacterial regulatory proteins, luxR family L3i22_100010 PF08240 Alcohol dehydrogenase GroES-like domain L3i22_100010 PF00107 Zinc-binding dehydrogenase L3i22_100020 PF00171 Aldehyde dehydrogenase family L3i22_100030 PF00440 Bacterial regulatory proteins, tetR family L3i22_100030 PF02909 Tetracyclin repressor-like, C-terminal domain L3i22_100040 PF13193 AMP-binding enzyme C-terminal domain L3i22_100040 PF00501 AMP-binding enzyme L3i22_100050 PF00293 NUDIX domain L3i22_100180 PF01926 50S ribosome-binding GTPase L3i22_100180 PF06071 Protein of unknown function (DUF933) L3i22_100210 PF00730 HhH-GPD superfamily base excision DNA repair protein L3i22_100210 PF06029 AlkA N-terminal domain L3i22_100210 PF02805 Metal binding domain of Ada L3i22_100210 PF12833 Helix-turn-helix domain L3i22_100220 PF02805 Metal binding domain of Ada L3i22_100220 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain L3i22_100220 PF12833 Helix-turn-helix domain L3i22_100220 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain L3i22_100230 PF08264 Anticodon-binding domain of tRNA L3i22_100230 PF00133 tRNA synthetases class I (I, L, M and V) L3i22_100270 PF02646 RmuC family L3i22_100280 PF02401 LytB protein L3i22_100310 PF13742 OB-fold nucleic acid binding domain L3i22_100310 PF02601 Exonuclease VII, large subunit L3i22_100320 PF02609 Exonuclease VII small subunit L3i22_100350 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded L3i22_100370 PF01694 Rhomboid family L3i22_100380 PF00089 Trypsin L3i22_100400 PF13638 PIN domain L3i22_100400 PF02562 PhoH-like protein L3i22_100410 PF02358 Trehalose-phosphatase L3i22_100420 PF01255 Putative undecaprenyl diphosphate synthase L3i22_100430 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain L3i22_100430 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain L3i22_100480 PF02237 Biotin protein ligase C terminal domain L3i22_100480 PF03099 Biotin/lipoate A/B protein ligase family L3i22_100480 PF08279 HTH domain L3i22_100510 PF01039 Carboxyl transferase domain L3i22_100540 PF00069 Protein kinase domain L3i22_100540 PF03793 PASTA domain L3i22_100570 PF00082 Subtilase family L3i22_100580 PF02545 Maf-like protein L3i22_100600 PF02785 Biotin carboxylase C-terminal domain L3i22_100600 PF00289 Biotin carboxylase, N-terminal domain L3i22_100600 PF00364 Biotin-requiring enzyme L3i22_100600 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain L3i22_100640 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain L3i22_100640 PF07992 Pyridine nucleotide-disulphide oxidoreductase L3i22_100690 PF12706 Beta-lactamase superfamily domain L3i22_100710 PF01546 Peptidase family M20/M25/M40 L3i22_100710 PF04107 Glutamate-cysteine ligase family 2(GCS2) L3i22_100720 PF00069 Protein kinase domain L3i22_100720 PF03793 PASTA domain L3i22_100730 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain L3i22_100730 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III L3i22_100730 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II L3i22_100730 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I L3i22_100750 PF00535 Glycosyl transferase family 2 L3i22_100760 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase L3i22_100770 PF00132 Bacterial transferase hexapeptide (six repeats) L3i22_100780 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain L3i22_100780 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain L3i22_100780 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain L3i22_100820 PF00535 Glycosyl transferase family 2 L3i22_100830 PF02894 Oxidoreductase family, C-terminal alpha/beta domain L3i22_100830 PF01408 Oxidoreductase family, NAD-binding Rossmann fold L3i22_100840 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family L3i22_100850 PF00534 Glycosyl transferases group 1 L3i22_100850 PF13439 Glycosyltransferase Family 4 L3i22_100890 PF01791 DeoC/LacD family aldolase L3i22_100900 PF00171 Aldehyde dehydrogenase family L3i22_100910 PF00171 Aldehyde dehydrogenase family L3i22_100970 PF03259 Roadblock/LC7 domain L3i22_100990 PF00962 Adenosine/AMP deaminase L3i22_101020 PF02885 Glycosyl transferase family, helical bundle domain L3i22_101020 PF00591 Glycosyl transferase family, a/b domain L3i22_101020 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain L3i22_101030 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region L3i22_101040 PF02653 Branched-chain amino acid transport system / permease component L3i22_101050 PF02653 Branched-chain amino acid transport system / permease component L3i22_101060 PF00005 ABC transporter L3i22_101070 PF02608 ABC transporter substrate-binding protein PnrA-like L3i22_101120 PF00579 tRNA synthetases class I (W and Y) L3i22_101130 PF01370 NAD dependent epimerase/dehydratase family L3i22_101140 PF00288 GHMP kinases N terminal domain L3i22_101140 PF10509 Galactokinase galactose-binding signature L3i22_101140 PF08544 GHMP kinases C terminal L3i22_101160 PF00009 Elongation factor Tu GTP binding domain L3i22_101170 PF01507 Phosphoadenosine phosphosulfate reductase family L3i22_101180 PF00459 Inositol monophosphatase family L3i22_101190 PF02397 Bacterial sugar transferase L3i22_101200 PF01195 Peptidyl-tRNA hydrolase L3i22_101210 PF01386 Ribosomal L25p family L3i22_101210 PF14693 Ribosomal protein TL5, C-terminal domain L3i22_101220 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase L3i22_101220 PF14572 Phosphoribosyl synthetase-associated domain L3i22_101230 PF00483 Nucleotidyl transferase L3i22_101230 PF00132 Bacterial transferase hexapeptide (six repeats) L3i22_101240 PF00440 Bacterial regulatory proteins, tetR family L3i22_101260 PF00005 ABC transporter L3i22_101260 PF16326 ABC transporter C-terminal domain L3i22_101260 PF12848 ABC transporter L3i22_101270 PF08544 GHMP kinases C terminal L3i22_101270 PF00288 GHMP kinases N terminal domain L3i22_101280 PF00398 Ribosomal RNA adenine dimethylase L3i22_101290 PF01026 TatD related DNase L3i22_101320 PF09334 tRNA synthetases class I (M) L3i22_101340 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases L3i22_101350 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase L3i22_101350 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase L3i22_101370 PF01522 Polysaccharide deacetylase L3i22_101420 PF03454 MoeA C-terminal region (domain IV) L3i22_101420 PF00994 Probable molybdopterin binding domain L3i22_101420 PF03453 MoeA N-terminal region (domain I and II) L3i22_101430 PF00483 Nucleotidyl transferase L3i22_101440 PF00990 Diguanylate cyclase, GGDEF domain L3i22_101510 PF01475 Ferric uptake regulator family L3i22_101540 PF01914 MarC family integral membrane protein L3i22_101550 PF02811 PHP domain L3i22_101600 PF00085 Thioredoxin L3i22_101610 PF04055 Radical SAM superfamily L3i22_101610 PF04055 Radical SAM superfamily L3i22_101660 PF13419 Haloacid dehalogenase-like hydrolase L3i22_101680 PF02567 Phenazine biosynthesis-like protein L3i22_101690 PF03448 MgtE intracellular N domain L3i22_101690 PF00571 CBS domain L3i22_101690 PF01769 Divalent cation transporter L3i22_101710 PF10609 NUBPL iron-transfer P-loop NTPase L3i22_101710 PF01883 Iron-sulfur cluster assembly protein L3i22_101720 PF02416 mttA/Hcf106 family L3i22_101730 PF13180 PDZ domain L3i22_101740 PF01596 O-methyltransferase L3i22_101750 PF00883 Cytosol aminopeptidase family, catalytic domain L3i22_101750 PF02789 Cytosol aminopeptidase family, N-terminal domain L3i22_101780 PF00378 Enoyl-CoA hydratase/isomerase L3i22_101800 PF13673 Acetyltransferase (GNAT) domain L3i22_101800 PF13302 Acetyltransferase (GNAT) domain L3i22_101800 PF00958 GMP synthase C terminal domain L3i22_101800 PF03352 Methyladenine glycosylase L3i22_101800 PF00117 Glutamine amidotransferase class-I L3i22_101830 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 L3i22_101840 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II L3i22_101840 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg L3i22_101840 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase L3i22_101850 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain L3i22_101870 PF00196 Bacterial regulatory proteins, luxR family L3i22_101910 PF00490 Delta-aminolevulinic acid dehydratase L3i22_101920 PF10414 Sirohaem synthase dimerisation region L3i22_101920 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases L3i22_101920 PF14824 Sirohaem biosynthesis protein central L3i22_101930 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain L3i22_101930 PF03900 Porphobilinogen deaminase, C-terminal domain L3i22_101940 PF01488 Shikimate / quinate 5-dehydrogenase L3i22_101940 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain L3i22_101940 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain L3i22_101950 PF02629 CoA binding domain L3i22_101950 PF06971 Putative DNA-binding protein N-terminus L3i22_101970 PF05768 Glutaredoxin-like domain (DUF836) L3i22_101980 PF00501 AMP-binding enzyme L3i22_101980 PF13193 AMP-binding enzyme C-terminal domain L3i22_101990 PF08281 Sigma-70, region 4 L3i22_101990 PF04542 Sigma-70 region 2 L3i22_102010 PF01553 Acyltransferase L3i22_102020 PF01370 NAD dependent epimerase/dehydratase family L3i22_102040 PF12728 Helix-turn-helix domain L3i22_102050 PF01619 Proline dehydrogenase L3i22_102070 PF01261 Xylose isomerase-like TIM barrel L3i22_102090 PF00486 Transcriptional regulatory protein, C terminal L3i22_102090 PF00072 Response regulator receiver domain L3i22_102100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_102100 PF00512 His Kinase A (phospho-acceptor) domain L3i22_102110 PF01895 PhoU domain L3i22_102120 PF00300 Histidine phosphatase superfamily (branch 1) L3i22_102150 PF10722 Putative bacterial sensory transduction regulator L3i22_102160 PF13439 Glycosyltransferase Family 4 L3i22_102160 PF00534 Glycosyl transferases group 1 L3i22_102170 PF00106 short chain dehydrogenase L3i22_102190 PF00072 Response regulator receiver domain L3i22_102190 PF00486 Transcriptional regulatory protein, C terminal L3i22_102200 PF00082 Subtilase family L3i22_102200 PF05922 Peptidase inhibitor I9 L3i22_102220 PF18698 Histidine kinase sensor domain L3i22_102220 PF00989 PAS fold L3i22_102220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_102220 PF00672 HAMP domain L3i22_102220 PF00512 His Kinase A (phospho-acceptor) domain L3i22_102230 PF03364 Polyketide cyclase / dehydrase and lipid transport L3i22_102250 PF02599 Global regulator protein family L3i22_102260 PF02623 FliW protein L3i22_102280 PF00460 Flagella basal body rod protein L3i22_102280 PF06429 Flagellar basal body rod FlgEFG protein C-terminal L3i22_102300 PF00669 Bacterial flagellin N-terminal helical region L3i22_102300 PF07196 Flagellin hook IN motif L3i22_102300 PF00700 Bacterial flagellin C-terminal helical region L3i22_102340 PF00460 Flagella basal body rod protein L3i22_102350 PF00460 Flagella basal body rod protein L3i22_102350 PF06429 Flagellar basal body rod FlgEFG protein C-terminal L3i22_102360 PF02049 Flagellar hook-basal body complex protein FliE L3i22_102370 PF01514 Secretory protein of YscJ/FliF family L3i22_102370 PF08345 Flagellar M-ring protein C-terminal L3i22_102380 PF14842 FliG N-terminal domain L3i22_102380 PF01706 FliG C-terminal domain L3i22_102380 PF14841 FliG middle domain L3i22_102400 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain L3i22_102400 PF02874 ATP synthase alpha/beta family, beta-barrel domain L3i22_102400 PF18269 T3SS EscN ATPase C-terminal domain L3i22_102420 PF01464 Transglycosylase SLT domain L3i22_102460 PF00771 FHIPEP family L3i22_102470 PF01312 FlhB HrpN YscU SpaS Family L3i22_102480 PF01311 Bacterial export proteins, family 1 L3i22_102490 PF00813 FliP family L3i22_102510 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term L3i22_102510 PF04509 CheC-like family L3i22_102520 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term L3i22_102520 PF02154 Flagellar motor switch protein FliM L3i22_102540 PF13677 Membrane MotB of proton-channel complex MotA/MotB L3i22_102540 PF00691 OmpA family L3i22_102550 PF01618 MotA/TolQ/ExbB proton channel family L3i22_102570 PF00460 Flagella basal body rod protein L3i22_102570 PF06429 Flagellar basal body rod FlgEFG protein C-terminal L3i22_102570 PF07559 Flagellar basal body protein FlaE L3i22_102600 PF00072 Response regulator receiver domain L3i22_102620 PF00486 Transcriptional regulatory protein, C terminal L3i22_102620 PF00072 Response regulator receiver domain L3i22_102630 PF01739 CheR methyltransferase, SAM binding domain L3i22_102630 PF03705 CheR methyltransferase, all-alpha domain L3i22_102640 PF01339 CheB methylesterase L3i22_102640 PF00072 Response regulator receiver domain L3i22_102670 PF02895 Signal transducing histidine kinase, homodimeric domain L3i22_102670 PF00072 Response regulator receiver domain L3i22_102670 PF01584 CheW-like domain L3i22_102670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_102670 PF01627 Hpt domain L3i22_102680 PF00486 Transcriptional regulatory protein, C terminal L3i22_102680 PF00072 Response regulator receiver domain L3i22_102700 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain L3i22_102700 PF01565 FAD binding domain L3i22_102720 PF00232 Glycosyl hydrolase family 1 L3i22_102730 PF00356 Bacterial regulatory proteins, lacI family L3i22_102740 PF01661 Macro domain L3i22_102810 PF01381 Helix-turn-helix L3i22_102830 PF05853 beta-keto acid cleavage enzyme L3i22_102850 PF01475 Ferric uptake regulator family L3i22_102870 PF08768 Domain of unknown function (DUF1794) L3i22_102900 PF00293 NUDIX domain L3i22_102910 PF13307 Helicase C-terminal domain L3i22_102930 PF08281 Sigma-70, region 4 L3i22_102930 PF12680 SnoaL-like domain L3i22_102930 PF04542 Sigma-70 region 2 L3i22_102960 PF01384 Phosphate transporter family L3i22_102970 PF01408 Oxidoreductase family, NAD-binding Rossmann fold L3i22_102970 PF02894 Oxidoreductase family, C-terminal alpha/beta domain L3i22_102990 PF00005 ABC transporter L3i22_103000 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_103010 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_103020 PF12849 PBP superfamily domain L3i22_103030 PF00583 Acetyltransferase (GNAT) family L3i22_103040 PF00486 Transcriptional regulatory protein, C terminal L3i22_103070 PF00581 Rhodanese-like domain L3i22_103080 PF07210 Protein of unknown function (DUF1416) L3i22_103090 PF01594 AI-2E family transporter L3i22_103110 PF13367 PrsW family intramembrane metalloprotease L3i22_103150 PF01266 FAD dependent oxidoreductase L3i22_103150 PF16901 C-terminal domain of alpha-glycerophosphate oxidase L3i22_103190 PF00118 TCP-1/cpn60 chaperonin family L3i22_103220 PF00291 Pyridoxal-phosphate dependent enzyme L3i22_103250 PF00005 ABC transporter L3i22_103270 PF17862 AAA+ lid domain L3i22_103270 PF00004 ATPase family associated with various cellular activities (AAA) L3i22_103270 PF01434 Peptidase family M41 L3i22_103300 PF00005 ABC transporter L3i22_103310 PF00455 DeoR C terminal sensor domain L3i22_103310 PF08220 DeoR-like helix-turn-helix domain L3i22_103330 PF00480 ROK family L3i22_103340 PF01979 Amidohydrolase family L3i22_103440 PF17912 MalK OB fold domain L3i22_103440 PF00005 ABC transporter L3i22_103490 PF00588 SpoU rRNA Methylase family L3i22_103490 PF08032 RNA 2'-O ribose methyltransferase substrate binding L3i22_103500 PF09190 DALR domain L3i22_103500 PF01406 tRNA synthetases class I (C) catalytic domain L3i22_103510 PF00082 Subtilase family L3i22_103510 PF05922 Peptidase inhibitor I9 L3i22_103520 PF00206 Lyase L3i22_103520 PF10415 Fumarase C C-terminus L3i22_103530 PF00486 Transcriptional regulatory protein, C terminal L3i22_103530 PF00931 NB-ARC domain L3i22_103530 PF03704 Bacterial transcriptional activator domain L3i22_103550 PF05681 Fumarate hydratase (Fumerase) L3i22_103550 PF05683 Fumarase C-terminus L3i22_103580 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily L3i22_103600 PF00155 Aminotransferase class I and II L3i22_103610 PF07690 Major Facilitator Superfamily L3i22_103620 PF00480 ROK family L3i22_103620 PF01047 MarR family L3i22_103680 PF02542 YgbB family L3i22_103700 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase L3i22_103710 PF02559 CarD-like/TRCF domain L3i22_103740 PF00195 Chalcone and stilbene synthases, N-terminal domain L3i22_103740 PF02797 Chalcone and stilbene synthases, C-terminal domain L3i22_103780 PF06745 KaiC L3i22_103780 PF18073 Rubredoxin metal binding domain L3i22_103790 PF10635 DisA bacterial checkpoint controller linker region L3i22_103790 PF02457 DisA bacterial checkpoint controller nucleotide-binding L3i22_103790 PF12826 Helix-hairpin-helix motif L3i22_103820 PF00730 HhH-GPD superfamily base excision DNA repair protein L3i22_103820 PF10576 Iron-sulfur binding domain of endonuclease III L3i22_103820 PF00633 Helix-hairpin-helix motif L3i22_103830 PF04542 Sigma-70 region 2 L3i22_103830 PF12680 SnoaL-like domain L3i22_103830 PF08281 Sigma-70, region 4 L3i22_103870 PF10431 C-terminal, D2-small domain, of ClpB protein L3i22_103870 PF02861 Clp amino terminal domain, pathogenicity island component L3i22_103870 PF17871 AAA lid domain L3i22_103870 PF07724 AAA domain (Cdc48 subfamily) L3i22_103870 PF00004 ATPase family associated with various cellular activities (AAA) L3i22_103880 PF11774 Lsr2 L3i22_103890 PF01336 OB-fold nucleic acid binding domain L3i22_103890 PF00152 tRNA synthetases class II (D, K and N) L3i22_103900 PF03309 Type III pantothenate kinase L3i22_103910 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain L3i22_103910 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain L3i22_103920 PF02910 Fumarate reductase flavoprotein C-term L3i22_103920 PF00890 FAD binding domain L3i22_103940 PF02261 Aspartate decarboxylase L3i22_103950 PF02569 Pantoate-beta-alanine ligase L3i22_103980 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit L3i22_104010 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_104020 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_104030 PF00571 CBS domain L3i22_104030 PF00005 ABC transporter L3i22_104080 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) L3i22_104090 PF02152 Dihydroneopterin aldolase L3i22_104100 PF00809 Pterin binding enzyme L3i22_104160 PF10145 Phage-related minor tail protein L3i22_104160 PF01464 Transglycosylase SLT domain L3i22_104160 PF01551 Peptidase family M23 L3i22_104180 PF01580 FtsK/SpoIIIE family L3i22_104210 PF01227 GTP cyclohydrolase I L3i22_104220 PF01434 Peptidase family M41 L3i22_104220 PF17862 AAA+ lid domain L3i22_104220 PF00004 ATPase family associated with various cellular activities (AAA) L3i22_104230 PF00156 Phosphoribosyl transferase domain L3i22_104240 PF01171 PP-loop family L3i22_104240 PF09179 TilS substrate binding domain L3i22_104260 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family L3i22_104280 PF00719 Inorganic pyrophosphatase L3i22_104300 PF01580 FtsK/SpoIIIE family L3i22_104310 PF00082 Subtilase family L3i22_104310 PF05922 Peptidase inhibitor I9 L3i22_104320 PF02674 Colicin V production protein L3i22_104330 PF00293 NUDIX domain L3i22_104340 PF00578 AhpC/TSA family L3i22_104350 PF00730 HhH-GPD superfamily base excision DNA repair protein L3i22_104350 PF10576 Iron-sulfur binding domain of endonuclease III L3i22_104360 PF09587 Bacterial capsule synthesis protein PGA_cap L3i22_104370 PF13545 Crp-like helix-turn-helix domain L3i22_104370 PF00027 Cyclic nucleotide-binding domain L3i22_104390 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain L3i22_104390 PF00289 Biotin carboxylase, N-terminal domain L3i22_104390 PF02785 Biotin carboxylase C-terminal domain L3i22_104390 PF00364 Biotin-requiring enzyme L3i22_104400 PF13191 AAA ATPase domain L3i22_104400 PF00069 Protein kinase domain L3i22_104410 PF00072 Response regulator receiver domain L3i22_104410 PF00211 Adenylate and Guanylate cyclase catalytic domain L3i22_104420 PF00753 Metallo-beta-lactamase superfamily L3i22_104420 PF16123 Hydroxyacylglutathione hydrolase C-terminus L3i22_104460 PF02374 Anion-transporting ATPase L3i22_104470 PF02374 Anion-transporting ATPase L3i22_104470 PF17886 HSP20-like domain found in ArsA L3i22_104480 PF02467 Transcription factor WhiB L3i22_104490 PF00912 Transglycosylase L3i22_104490 PF00905 Penicillin binding protein transpeptidase domain L3i22_104490 PF17092 Penicillin-binding protein OB-like domain L3i22_104500 PF09424 Yqey-like protein L3i22_104510 PF00149 Calcineurin-like phosphoesterase L3i22_104530 PF00156 Phosphoribosyl transferase domain L3i22_104540 PF01118 Semialdehyde dehydrogenase, NAD binding domain L3i22_104540 PF02774 Semialdehyde dehydrogenase, dimerisation domain L3i22_104550 PF00696 Amino acid kinase family L3i22_104550 PF01842 ACT domain L3i22_104550 PF13840 ACT domain L3i22_104570 PF00682 HMGL-like L3i22_104570 PF08502 LeuA allosteric (dimerisation) domain L3i22_104600 PF02838 Glycosyl hydrolase family 20, domain 2 L3i22_104600 PF00728 Glycosyl hydrolase family 20, catalytic domain L3i22_104610 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L3i22_104610 PF00005 ABC transporter L3i22_104620 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L3i22_104620 PF00005 ABC transporter L3i22_104630 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_104640 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle L3i22_104650 PF12911 N-terminal TM domain of oligopeptide transport permease C L3i22_104650 PF00528 Binding-protein-dependent transport system inner membrane component L3i22_104660 PF02132 RecR protein L3i22_104660 PF13662 Toprim domain L3i22_104670 PF02575 YbaB/EbfC DNA-binding family L3i22_104680 PF12169 DNA polymerase III subunits gamma and tau domain III L3i22_104720 PF01048 Phosphorylase superfamily L3i22_104730 PF14437 MafB19-like deaminase L3i22_104770 PF02153 Prephenate dehydrogenase L3i22_104780 PF04978 Protein of unknown function (DUF664) L3i22_104790 PF00596 Class II Aldolase and Adducin N-terminal domain L3i22_104790 PF01008 Initiation factor 2 subunit family L3i22_104820 PF14791 DNA polymerase beta thumb L3i22_104820 PF14716 Helix-hairpin-helix domain L3i22_104820 PF02811 PHP domain L3i22_104850 PF00512 His Kinase A (phospho-acceptor) domain L3i22_104850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_104850 PF08521 Two-component sensor kinase N-terminal L3i22_104910 PF02350 UDP-N-acetylglucosamine 2-epimerase L3i22_104950 PF00440 Bacterial regulatory proteins, tetR family L3i22_104960 PF02839 Carbohydrate binding domain L3i22_104980 PF07690 Major Facilitator Superfamily L3i22_104990 PF00990 Diguanylate cyclase, GGDEF domain L3i22_105110 PF01259 SAICAR synthetase L3i22_105140 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading L3i22_105150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_105150 PF00512 His Kinase A (phospho-acceptor) domain L3i22_105150 PF00672 HAMP domain L3i22_105160 PF00486 Transcriptional regulatory protein, C terminal L3i22_105160 PF00072 Response regulator receiver domain L3i22_105180 PF02868 Thermolysin metallopeptidase, alpha-helical domain L3i22_105180 PF01447 Thermolysin metallopeptidase, catalytic domain L3i22_105180 PF04389 Peptidase family M28 L3i22_105240 PF02632 BioY family L3i22_105260 PF00248 Aldo/keto reductase family L3i22_105290 PF00005 ABC transporter L3i22_105310 PF08281 Sigma-70, region 4 L3i22_105310 PF04542 Sigma-70 region 2 L3i22_105350 PF02894 Oxidoreductase family, C-terminal alpha/beta domain L3i22_105350 PF01408 Oxidoreductase family, NAD-binding Rossmann fold L3i22_105380 PF17866 AAA lid domain L3i22_105380 PF00004 ATPase family associated with various cellular activities (AAA) L3i22_105390 PF04545 Sigma-70, region 4 L3i22_105390 PF04542 Sigma-70 region 2 L3i22_105440 PF03551 Transcriptional regulator PadR-like family L3i22_105450 PF01580 FtsK/SpoIIIE family L3i22_105450 PF12538 DNA transporter L3i22_105500 PF07969 Amidohydrolase family L3i22_105520 PF08241 Methyltransferase domain L3i22_105540 PF01568 Molydopterin dinucleotide binding domain L3i22_105540 PF00384 Molybdopterin oxidoreductase L3i22_105540 PF04879 Molybdopterin oxidoreductase Fe4S4 domain L3i22_105570 PF00544 Pectate lyase L3i22_105580 PF00144 Beta-lactamase L3i22_105590 PF00534 Glycosyl transferases group 1 L3i22_105590 PF13439 Glycosyltransferase Family 4 L3i22_105600 PF13439 Glycosyltransferase Family 4 L3i22_105600 PF00534 Glycosyl transferases group 1 L3i22_105620 PF00534 Glycosyl transferases group 1 L3i22_105620 PF13439 Glycosyltransferase Family 4 L3i22_105640 PF00534 Glycosyl transferases group 1 L3i22_105640 PF13439 Glycosyltransferase Family 4 L3i22_105670 PF00795 Carbon-nitrogen hydrolase L3i22_105670 PF00535 Glycosyl transferase family 2 L3i22_105680 PF16363 GDP-mannose 4,6 dehydratase L3i22_105690 PF00265 Thymidine kinase L3i22_105710 PF00012 Hsp70 protein L3i22_105800 PF08281 Sigma-70, region 4 L3i22_105800 PF04542 Sigma-70 region 2 L3i22_105860 PF00005 ABC transporter L3i22_105860 PF13732 Domain of unknown function (DUF4162) L3i22_105880 PF02839 Carbohydrate binding domain L3i22_105890 PF00563 EAL domain L3i22_105890 PF17154 Gammaproteobacterial periplasmic sensor domain L3i22_105890 PF00990 Diguanylate cyclase, GGDEF domain L3i22_105890 PF00672 HAMP domain L3i22_105910 PF00652 Ricin-type beta-trefoil lectin domain L3i22_105910 PF16483 Beta-1,3-glucanase L3i22_105920 PF03952 Enolase, N-terminal domain L3i22_105920 PF00113 Enolase, C-terminal TIM barrel domain L3i22_106020 PF00111 2Fe-2S iron-sulfur cluster binding domain L3i22_106020 PF00970 Oxidoreductase FAD-binding domain L3i22_106020 PF00175 Oxidoreductase NAD-binding domain L3i22_106030 PF01327 Polypeptide deformylase L3i22_106070 PF01161 Phosphatidylethanolamine-binding protein L3i22_106100 PF00698 Acyl transferase domain L3i22_106100 PF08240 Alcohol dehydrogenase GroES-like domain L3i22_106100 PF00107 Zinc-binding dehydrogenase L3i22_106100 PF16197 Ketoacyl-synthetase C-terminal extension L3i22_106100 PF00109 Beta-ketoacyl synthase, N-terminal domain L3i22_106100 PF02801 Beta-ketoacyl synthase, C-terminal domain L3i22_106100 PF08659 KR domain L3i22_106100 PF00550 Phosphopantetheine attachment site L3i22_106100 PF14765 Polyketide synthase dehydratase L3i22_106130 PF09278 MerR, DNA binding L3i22_106130 PF00376 MerR family regulatory protein L3i22_106140 PF00456 Transketolase, thiamine diphosphate binding domain L3i22_106150 PF02779 Transketolase, pyrimidine binding domain L3i22_106190 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD L3i22_106220 PF01544 CorA-like Mg2+ transporter protein L3i22_106230 PF00155 Aminotransferase class I and II L3i22_106230 PF00392 Bacterial regulatory proteins, gntR family L3i22_106240 PF00483 Nucleotidyl transferase L3i22_106250 PF13685 Iron-containing alcohol dehydrogenase L3i22_106290 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain L3i22_106290 PF06827 Zinc finger found in FPG and IleRS L3i22_106300 PF02397 Bacterial sugar transferase L3i22_106310 PF07694 5TMR of 5TMR-LYT L3i22_106310 PF06580 Histidine kinase L3i22_106320 PF04397 LytTr DNA-binding domain L3i22_106320 PF00072 Response regulator receiver domain L3i22_106330 PF00072 Response regulator receiver domain L3i22_106330 PF00486 Transcriptional regulatory protein, C terminal L3i22_106340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_106340 PF00672 HAMP domain L3i22_106340 PF00512 His Kinase A (phospho-acceptor) domain L3i22_106370 PF00474 Sodium:solute symporter family L3i22_106390 PF13732 Domain of unknown function (DUF4162) L3i22_106390 PF00005 ABC transporter L3i22_106420 PF00392 Bacterial regulatory proteins, gntR family L3i22_106420 PF07702 UTRA domain L3i22_106460 PF00474 Sodium:solute symporter family L3i22_106470 PF13399 LytR cell envelope-related transcriptional attenuator L3i22_106470 PF03816 Cell envelope-related transcriptional attenuator domain L3i22_106480 PF00581 Rhodanese-like domain L3i22_106490 PF03009 Glycerophosphoryl diester phosphodiesterase family L3i22_106500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L3i22_106500 PF00672 HAMP domain L3i22_106500 PF00512 His Kinase A (phospho-acceptor) domain L3i22_106500 PF18698 Histidine kinase sensor domain L3i22_106580 PF00800 Prephenate dehydratase L3i22_106580 PF01842 ACT domain L3i22_106600 PF02566 OsmC-like protein L3i22_106620 PF02403 Seryl-tRNA synthetase N-terminal domain L3i22_106620 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) L3i22_106650 PF10759 Protein of unknown function (DUF2587) L3i22_106670 PF01037 Lrp/AsnC ligand binding domain L3i22_106710 PF02634 FdhD/NarQ family L3i22_106750 PF06463 Molybdenum Cofactor Synthesis C L3i22_106750 PF04055 Radical SAM superfamily L3i22_106780 PF00149 Calcineurin-like phosphoesterase L3i22_106790 PF00580 UvrD/REP helicase N-terminal domain L3i22_106790 PF13361 UvrD-like helicase C-terminal domain L3i22_106850 PF02391 MoaE protein L3i22_106870 PF00994 Probable molybdopterin binding domain L3i22_106870 PF01967 MoaC family L3i22_106880 PF01967 MoaC family L3i22_106890 PF00563 EAL domain L3i22_106890 PF08448 PAS fold L3i22_106890 PF08447 PAS fold L3i22_106890 PF00990 Diguanylate cyclase, GGDEF domain L3i22_106930 PF03796 DnaB-like helicase C terminal domain L3i22_106930 PF00772 DnaB-like helicase N terminal domain L3i22_106930 PF14528 LAGLIDADG-like domain L3i22_106930 PF03796 DnaB-like helicase C terminal domain L3i22_106930 PF00772 DnaB-like helicase N terminal domain L3i22_106930 PF14528 LAGLIDADG-like domain L3i22_106960 PF03948 Ribosomal protein L9, C-terminal domain L3i22_106960 PF01281 Ribosomal protein L9, N-terminal domain L3i22_106970 PF01084 Ribosomal protein S18 L3i22_106980 PF00436 Single-strand binding protein family L3i22_106990 PF01250 Ribosomal protein S6 L3i22_107010 PF01261 Xylose isomerase-like TIM barrel L3i22_107040 PF00912 Transglycosylase L3i22_107040 PF00905 Penicillin binding protein transpeptidase domain L3i22_107060 PF17249 Family of unknown function (DUF5318) L3i22_107070 PF03551 Transcriptional regulator PadR-like family L3i22_107080 PF01658 Myo-inositol-1-phosphate synthase L3i22_107090 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain L3i22_107090 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain L3i22_107160 PF01743 Poly A polymerase head domain L3i22_107160 PF12627 Probable RNA and SrmB- binding site of polymerase A L3i22_107160 PF13735 tRNA nucleotidyltransferase domain 2 putative L3i22_107180 PF03023 Lipid II flippase MurJ L3i22_107190 PF00069 Protein kinase domain L3i22_107190 PF03793 PASTA domain L3i22_107200 PF08281 Sigma-70, region 4 L3i22_107200 PF04542 Sigma-70 region 2 L3i22_107220 PF07992 Pyridine nucleotide-disulphide oxidoreductase L3i22_107230 PF00085 Thioredoxin L3i22_107240 PF01520 N-acetylmuramoyl-L-alanine amidase L3i22_107240 PF01471 Putative peptidoglycan binding domain L3i22_107260 PF00155 Aminotransferase class I and II L3i22_107280 PF07478 D-ala D-ala ligase C-terminus L3i22_107280 PF01820 D-ala D-ala ligase N-terminus L3i22_107320 PF17762 HTH domain found in ParB protein L3i22_107320 PF02195 ParB-like nuclease domain L3i22_107330 PF13614 AAA domain L3i22_107340 PF02527 rRNA small subunit methyltransferase G L3i22_107360 PF02096 60Kd inner membrane protein L3i22_107370 PF01809 Putative membrane protein insertion efficiency factor L3i22_107380 PF00825 Ribonuclease P L3i22_107390 PF00468 Ribosomal protein L34 L3i22_t000450 PF00356 Bacterial regulatory proteins, lacI family L3i22_t000750 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase