locus-tag class description ACPL_1000 PF00291 Pyridoxal-phosphate dependent enzyme ACPL_1008 PF00664 ABC transporter transmembrane region ACPL_1008 PF00005 ABC transporter ACPL_1012 PF03621 MbtH-like protein ACPL_1013 PF00501 AMP-binding enzyme ACPL_1013 PF13193 AMP-binding enzyme C-terminal domain ACPL_1013 PF00668 Condensation domain ACPL_1013 PF00550 Phosphopantetheine attachment site ACPL_1014 PF00501 AMP-binding enzyme ACPL_1014 PF13193 AMP-binding enzyme C-terminal domain ACPL_1014 PF00668 Condensation domain ACPL_1014 PF00550 Phosphopantetheine attachment site ACPL_1014 PF00975 Thioesterase domain ACPL_1017 PF03176 MMPL family ACPL_1019 PF00975 Thioesterase domain ACPL_1020 PF03621 MbtH-like protein ACPL_1021 PF13193 AMP-binding enzyme C-terminal domain ACPL_1021 PF00668 Condensation domain ACPL_1021 PF07993 Male sterility protein ACPL_1021 PF00550 Phosphopantetheine attachment site ACPL_1021 PF00501 AMP-binding enzyme ACPL_1024 PF00501 AMP-binding enzyme ACPL_1024 PF00668 Condensation domain ACPL_1024 PF13193 AMP-binding enzyme C-terminal domain ACPL_1024 PF00550 Phosphopantetheine attachment site ACPL_1026 PF04545 Sigma-70, region 4 ACPL_1026 PF04542 Sigma-70 region 2 ACPL_1029 PF08502 LeuA allosteric (dimerisation) domain ACPL_1029 PF00682 HMGL-like ACPL_1030 PF00588 SpoU rRNA Methylase family ACPL_1034 PF00356 Bacterial regulatory proteins, lacI family ACPL_1037 PF00155 Aminotransferase class I and II ACPL_1038 PF01053 Cys/Met metabolism PLP-dependent enzyme ACPL_1041 PF03061 Thioesterase superfamily ACPL_1043 PF13439 Glycosyltransferase Family 4 ACPL_1044 PF00483 Nucleotidyl transferase ACPL_1044 PF01050 Mannose-6-phosphate isomerase ACPL_1047 PF00881 Nitroreductase family ACPL_1047 PF01996 F420-0:Gamma-glutamyl ligase ACPL_1050 PF04055 Radical SAM superfamily ACPL_1051 PF02467 Transcription factor WhiB ACPL_1054 PF01522 Polysaccharide deacetylase ACPL_1056 PF00171 Aldehyde dehydrogenase family ACPL_1058 PF04493 Endonuclease V ACPL_1059 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ACPL_1059 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ACPL_1059 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ACPL_1059 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ACPL_1060 PF03966 Trm112p-like protein ACPL_1063 PF01238 Phosphomannose isomerase type I ACPL_1066 PF00486 Transcriptional regulatory protein, C terminal ACPL_1066 PF00072 Response regulator receiver domain ACPL_1067 PF00672 HAMP domain ACPL_1067 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_1067 PF00512 His Kinase A (phospho-acceptor) domain ACPL_1070 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus ACPL_1070 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ACPL_1072 PF07517 SecA DEAD-like domain ACPL_1072 PF02810 SEC-C motif ACPL_1072 PF01043 SecA preprotein cross-linking domain ACPL_1072 PF07516 SecA Wing and Scaffold domain ACPL_1078 PF03462 PCRF domain ACPL_1078 PF00472 RF-1 domain ACPL_1079 PF00005 ABC transporter ACPL_1080 PF02687 FtsX-like permease family ACPL_1080 PF18075 FtsX extracellular domain ACPL_1081 PF10145 Phage-related minor tail protein ACPL_1081 PF01464 Transglycosylase SLT domain ACPL_1081 PF01551 Peptidase family M23 ACPL_1082 PF01668 SmpB protein ACPL_1090 PF00293 NUDIX domain ACPL_1090 PF00300 Histidine phosphatase superfamily (branch 1) ACPL_1096 PF13546 DDE superfamily endonuclease ACPL_1107 PF06259 Alpha/beta hydrolase ACPL_1109 PF04389 Peptidase family M28 ACPL_1109 PF02868 Thermolysin metallopeptidase, alpha-helical domain ACPL_1109 PF01447 Thermolysin metallopeptidase, catalytic domain ACPL_1112 PF04542 Sigma-70 region 2 ACPL_1112 PF08281 Sigma-70, region 4 ACPL_1114 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch ACPL_1114 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ACPL_1114 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ACPL_1115 PF02233 NAD(P) transhydrogenase beta subunit ACPL_1118 PF02622 Uncharacterized ACR, COG1678 ACPL_1119 PF01048 Phosphorylase superfamily ACPL_1120 PF00072 Response regulator receiver domain ACPL_1120 PF00486 Transcriptional regulatory protein, C terminal ACPL_1121 PF00296 Luciferase-like monooxygenase ACPL_1125 PF01478 Type IV leader peptidase family ACPL_1125 PF06750 Bacterial Peptidase A24 N-terminal domain ACPL_1126 PF07963 Prokaryotic N-terminal methylation motif ACPL_1126 PF00114 Pilin (bacterial filament) ACPL_1127 PF00482 Type II secretion system (T2SS), protein F ACPL_1128 PF00437 Type II/IV secretion system protein ACPL_1129 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ACPL_1129 PF00437 Type II/IV secretion system protein ACPL_1130 PF01965 DJ-1/PfpI family ACPL_1132 PF01740 STAS domain ACPL_1134 PF00563 EAL domain ACPL_1134 PF00990 Diguanylate cyclase, GGDEF domain ACPL_1134 PF03707 Bacterial signalling protein N terminal repeat ACPL_1150 PF00563 EAL domain ACPL_1150 PF08448 PAS fold ACPL_1150 PF00990 Diguanylate cyclase, GGDEF domain ACPL_1151 PF01047 MarR family ACPL_1152 PF08240 Alcohol dehydrogenase GroES-like domain ACPL_1152 PF00107 Zinc-binding dehydrogenase ACPL_1154 PF01068 ATP dependent DNA ligase domain ACPL_1154 PF13298 DNA polymerase Ligase (LigD) ACPL_1154 PF04679 ATP dependent DNA ligase C terminal region ACPL_1155 PF01494 FAD binding domain ACPL_1156 PF00115 Cytochrome C and Quinol oxidase polypeptide I ACPL_1157 PF08548 Peptidase M10 serralysin C terminal ACPL_1157 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) ACPL_1157 PF12708 Pectate lyase superfamily protein ACPL_1159 PF00296 Luciferase-like monooxygenase ACPL_116 PF00308 Bacterial dnaA protein ACPL_116 PF08299 Bacterial dnaA protein helix-turn-helix ACPL_1161 PF00857 Isochorismatase family ACPL_1162 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ACPL_1162 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ACPL_1163 PF02617 ATP-dependent Clp protease adaptor protein ClpS ACPL_1165 PF14464 Prokaryotic homologs of the JAB domain ACPL_1166 PF02597 ThiS family ACPL_1167 PF00291 Pyridoxal-phosphate dependent enzyme ACPL_1169 PF12706 Beta-lactamase superfamily domain ACPL_117 PF00712 DNA polymerase III beta subunit, N-terminal domain ACPL_117 PF02767 DNA polymerase III beta subunit, central domain ACPL_117 PF02768 DNA polymerase III beta subunit, C-terminal domain ACPL_1170 PF13579 Glycosyl transferase 4-like domain ACPL_1170 PF00534 Glycosyl transferases group 1 ACPL_1171 PF01138 3' exoribonuclease family, domain 1 ACPL_1171 PF03725 3' exoribonuclease family, domain 2 ACPL_1172 PF01725 Ham1 family ACPL_1173 PF00221 Aromatic amino acid lyase ACPL_1174 PF01979 Amidohydrolase family ACPL_1175 PF01979 Amidohydrolase family ACPL_1176 PF01546 Peptidase family M20/M25/M40 ACPL_1177 PF17391 Urocanase N-terminal domain ACPL_1177 PF01175 Urocanase Rossmann-like domain ACPL_1177 PF17392 Urocanase C-terminal domain ACPL_118 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ACPL_118 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ACPL_1181 PF00578 AhpC/TSA family ACPL_1182 PF02675 S-adenosylmethionine decarboxylase ACPL_1189 PF08281 Sigma-70, region 4 ACPL_1189 PF04542 Sigma-70 region 2 ACPL_119 PF02463 RecF/RecN/SMC N terminal domain ACPL_1190 PF04234 CopC domain ACPL_1190 PF05425 Copper resistance protein D ACPL_1190 PF13115 YtkA-like ACPL_1192 PF00929 Exonuclease ACPL_1194 PF13546 DDE superfamily endonuclease ACPL_1196 PF00553 Cellulose binding domain ACPL_1196 PF00150 Cellulase (glycosyl hydrolase family 5) ACPL_1196 PF00041 Fibronectin type III domain ACPL_120 PF05258 Dna[CI] antecedent, DciA ACPL_1200 PF13977 BetI-type transcriptional repressor, C-terminal ACPL_1200 PF00440 Bacterial regulatory proteins, tetR family ACPL_1203 PF03734 L,D-transpeptidase catalytic domain ACPL_1203 PF17964 Bacterial Ig domain ACPL_1204 PF17964 Bacterial Ig domain ACPL_1204 PF03734 L,D-transpeptidase catalytic domain ACPL_1208 PF00196 Bacterial regulatory proteins, luxR family ACPL_1208 PF00072 Response regulator receiver domain ACPL_1211 PF00067 Cytochrome P450 ACPL_1213 PF17864 RuvB AAA lid domain ACPL_1213 PF05491 RuvB C-terminal winged helix domain ACPL_1213 PF05496 Holliday junction DNA helicase RuvB P-loop domain ACPL_1216 PF00563 EAL domain ACPL_1216 PF00990 Diguanylate cyclase, GGDEF domain ACPL_1216 PF08448 PAS fold ACPL_1227 PF01810 LysE type translocator ACPL_123 PF00204 DNA gyrase B ACPL_123 PF00986 DNA gyrase B subunit, carboxyl terminus ACPL_123 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_123 PF01751 Toprim domain ACPL_1231 PF01965 DJ-1/PfpI family ACPL_1234 PF04030 D-arabinono-1,4-lactone oxidase ACPL_1234 PF01565 FAD binding domain ACPL_1236 PF00486 Transcriptional regulatory protein, C terminal ACPL_1236 PF00072 Response regulator receiver domain ACPL_1237 PF00563 EAL domain ACPL_1237 PF03707 Bacterial signalling protein N terminal repeat ACPL_1237 PF00990 Diguanylate cyclase, GGDEF domain ACPL_124 PF03989 DNA gyrase C-terminal domain, beta-propeller ACPL_124 PF00521 DNA gyrase/topoisomerase IV, subunit A ACPL_1240 PF01544 CorA-like Mg2+ transporter protein ACPL_1242 PF00583 Acetyltransferase (GNAT) family ACPL_1243 PF00728 Glycosyl hydrolase family 20, catalytic domain ACPL_1243 PF02838 Glycosyl hydrolase family 20, domain 2 ACPL_125 PF12089 Transmembrane domain of unknown function (DUF3566) ACPL_1252 PF00356 Bacterial regulatory proteins, lacI family ACPL_1253 PF10282 Lactonase, 7-bladed beta-propeller ACPL_1255 PF00480 ROK family ACPL_1255 PF01047 MarR family ACPL_1256 PF01261 Xylose isomerase-like TIM barrel ACPL_1257 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ACPL_1257 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ACPL_1258 PF07690 Major Facilitator Superfamily ACPL_1259 PF00128 Alpha amylase, catalytic domain ACPL_1260 PF02824 TGS domain ACPL_1260 PF04607 Region found in RelA / SpoT proteins ACPL_1260 PF13291 ACT domain ACPL_1266 PF02223 Thymidylate kinase ACPL_1268 PF04545 Sigma-70, region 4 ACPL_1268 PF04539 Sigma-70 region 3 ACPL_1268 PF04542 Sigma-70 region 2 ACPL_1268 PF00140 Sigma-70 factor, region 1.2 ACPL_1270 PF12823 Domain of unknown function (DUF3817) ACPL_1276 PF03992 Antibiotic biosynthesis monooxygenase ACPL_1277 PF07690 Major Facilitator Superfamily ACPL_1281 PF00072 Response regulator receiver domain ACPL_1281 PF00196 Bacterial regulatory proteins, luxR family ACPL_1284 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ACPL_1284 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ACPL_129 PF00072 Response regulator receiver domain ACPL_129 PF00196 Bacterial regulatory proteins, luxR family ACPL_1290 PF00436 Single-strand binding protein family ACPL_1292 PF03186 CobD/Cbib protein ACPL_1293 PF07685 CobB/CobQ-like glutamine amidotransferase domain ACPL_1293 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ACPL_1294 PF01435 Peptidase family M48 ACPL_1295 PF01546 Peptidase family M20/M25/M40 ACPL_1295 PF07687 Peptidase dimerisation domain ACPL_1296 PF01494 FAD binding domain ACPL_1298 PF04679 ATP dependent DNA ligase C terminal region ACPL_1298 PF01068 ATP dependent DNA ligase domain ACPL_130 PF05384 Sensor protein DegS ACPL_130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_130 PF07730 Histidine kinase ACPL_1301 PF07685 CobB/CobQ-like glutamine amidotransferase domain ACPL_1301 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ACPL_1303 PF17092 Penicillin-binding protein OB-like domain ACPL_1303 PF00912 Transglycosylase ACPL_1303 PF00905 Penicillin binding protein transpeptidase domain ACPL_1304 PF00155 Aminotransferase class I and II ACPL_1305 PF02277 Phosphoribosyltransferase ACPL_1306 PF14824 Sirohaem biosynthesis protein central ACPL_1306 PF10414 Sirohaem synthase dimerisation region ACPL_1306 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ACPL_1307 PF00982 Glycosyltransferase family 20 ACPL_1309 PF00005 ABC transporter ACPL_1309 PF12848 ABC transporter ACPL_1314 PF01152 Bacterial-like globin ACPL_1316 PF00924 Mechanosensitive ion channel ACPL_1321 PF17174 Domain of unknown function (DUF5130) ACPL_1323 PF11838 ERAP1-like C-terminal domain ACPL_1323 PF01433 Peptidase family M1 domain ACPL_1324 PF01323 DSBA-like thioredoxin domain ACPL_1327 PF07859 alpha/beta hydrolase fold ACPL_1328 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ACPL_133 PF09297 NADH pyrophosphatase zinc ribbon domain ACPL_133 PF00293 NUDIX domain ACPL_1330 PF13530 Sterol carrier protein domain ACPL_1330 PF17668 Acetyltransferase (GNAT) domain ACPL_1337 PF02469 Fasciclin domain ACPL_1339 PF04545 Sigma-70, region 4 ACPL_1339 PF04542 Sigma-70 region 2 ACPL_1340 PF01022 Bacterial regulatory protein, arsR family ACPL_1341 PF07690 Major Facilitator Superfamily ACPL_1345 PF13823 Alcohol dehydrogenase GroES-associated ACPL_1345 PF08240 Alcohol dehydrogenase GroES-like domain ACPL_1345 PF00107 Zinc-binding dehydrogenase ACPL_1346 PF08240 Alcohol dehydrogenase GroES-like domain ACPL_1346 PF00107 Zinc-binding dehydrogenase ACPL_1348 PF01965 DJ-1/PfpI family ACPL_1351 PF00293 NUDIX domain ACPL_1352 PF05698 Bacterial trigger factor protein (TF) C-terminus ACPL_1352 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ACPL_1352 PF05697 Bacterial trigger factor protein (TF) ACPL_1353 PF00574 Clp protease ACPL_1354 PF00574 Clp protease ACPL_1355 PF10431 C-terminal, D2-small domain, of ClpB protein ACPL_1355 PF07724 AAA domain (Cdc48 subfamily) ACPL_1355 PF06689 ClpX C4-type zinc finger ACPL_1357 PF00795 Carbon-nitrogen hydrolase ACPL_136 PF01323 DSBA-like thioredoxin domain ACPL_1360 PF10458 Valyl tRNA synthetase tRNA binding arm ACPL_1360 PF08264 Anticodon-binding domain of tRNA ACPL_1360 PF00133 tRNA synthetases class I (I, L, M and V) ACPL_1361 PF08245 Mur ligase middle domain ACPL_1361 PF02875 Mur ligase family, glutamate ligase domain ACPL_1365 PF00334 Nucleoside diphosphate kinase ACPL_1366 PF08264 Anticodon-binding domain of tRNA ACPL_1366 PF00133 tRNA synthetases class I (I, L, M and V) ACPL_1369 PF12697 Alpha/beta hydrolase family ACPL_137 PF02657 Fe-S metabolism associated domain ACPL_1374 PF10150 Ribonuclease E/G family ACPL_1376 PF00829 Ribosomal prokaryotic L21 protein ACPL_1377 PF01016 Ribosomal L27 protein ACPL_1378 PF01926 50S ribosome-binding GTPase ACPL_1378 PF01018 GTP1/OBG ACPL_1378 PF09269 Domain of unknown function (DUF1967) ACPL_1379 PF13673 Acetyltransferase (GNAT) domain ACPL_1380 PF00579 tRNA synthetases class I (W and Y) ACPL_1381 PF01433 Peptidase family M1 domain ACPL_1381 PF11838 ERAP1-like C-terminal domain ACPL_1382 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_1382 PF00512 His Kinase A (phospho-acceptor) domain ACPL_1382 PF08448 PAS fold ACPL_1382 PF00072 Response regulator receiver domain ACPL_1382 PF13188 PAS domain ACPL_1383 PF01467 Cytidylyltransferase-like ACPL_1385 PF00300 Histidine phosphatase superfamily (branch 1) ACPL_1387 PF02645 Uncharacterised protein, DegV family COG1307 ACPL_1389 PF05175 Methyltransferase small domain ACPL_1389 PF17827 PrmC N-terminal domain ACPL_1390 PF10531 SLBB domain ACPL_1391 PF13567 Domain of unknown function (DUF4131) ACPL_1391 PF00753 Metallo-beta-lactamase superfamily ACPL_1391 PF03772 Competence protein ACPL_1394 PF01649 Ribosomal protein S20 ACPL_1398 PF06421 GTP-binding protein LepA C-terminus ACPL_1398 PF00009 Elongation factor Tu GTP binding domain ACPL_1398 PF03144 Elongation factor Tu domain 2 ACPL_1398 PF00679 Elongation factor G C-terminus ACPL_1399 PF04226 Transglycosylase associated protein ACPL_140 PF00581 Rhodanese-like domain ACPL_1402 PF00378 Enoyl-CoA hydratase/isomerase ACPL_1403 PF04055 Radical SAM superfamily ACPL_1405 PF01628 HrcA protein C terminal domain ACPL_1406 PF00684 DnaJ central domain ACPL_1406 PF01556 DnaJ C terminal domain ACPL_1406 PF00226 DnaJ domain ACPL_1407 PF04452 RNA methyltransferase ACPL_1408 PF03551 Transcriptional regulator PadR-like family ACPL_141 PF00183 Hsp90 protein ACPL_1410 PF07691 PA14 domain ACPL_1410 PF01915 Glycosyl hydrolase family 3 C-terminal domain ACPL_1410 PF00933 Glycosyl hydrolase family 3 N terminal domain ACPL_1410 PF14310 Fibronectin type III-like domain ACPL_1411 PF01230 HIT domain ACPL_1412 PF00144 Beta-lactamase ACPL_1413 PF02562 PhoH-like protein ACPL_1414 PF02130 Uncharacterized protein family UPF0054 ACPL_1415 PF01595 Cyclin M transmembrane N-terminal domain ACPL_1415 PF00571 CBS domain ACPL_1415 PF03471 Transporter associated domain ACPL_1417 PF07650 KH domain ACPL_1417 PF01926 50S ribosome-binding GTPase ACPL_1420 PF11967 Recombination protein O N terminal ACPL_1420 PF02565 Recombination protein O C terminal ACPL_1421 PF01255 Putative undecaprenyl diphosphate synthase ACPL_1424 PF01910 Thiamine-binding protein ACPL_1428 PF00005 ABC transporter ACPL_1430 PF00561 alpha/beta hydrolase fold ACPL_1433 PF01475 Ferric uptake regulator family ACPL_1434 PF01022 Bacterial regulatory protein, arsR family ACPL_1435 PF00950 ABC 3 transport family ACPL_1436 PF00005 ABC transporter ACPL_1437 PF01297 Zinc-uptake complex component A periplasmic ACPL_144 PF00289 Biotin carboxylase, N-terminal domain ACPL_144 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ACPL_144 PF02785 Biotin carboxylase C-terminal domain ACPL_1441 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ACPL_1441 PF03129 Anticodon binding domain ACPL_1443 PF13478 XdhC Rossmann domain ACPL_1443 PF02625 XdhC and CoxI family ACPL_1444 PF01207 Dihydrouridine synthase (Dus) ACPL_1447 PF03259 Roadblock/LC7 domain ACPL_145 PF00682 HMGL-like ACPL_1452 PF01966 HD domain ACPL_1452 PF13286 Phosphohydrolase-associated domain ACPL_1453 PF08278 DNA primase DnaG DnaB-binding ACPL_1453 PF08275 DNA primase catalytic core, N-terminal domain ACPL_1453 PF01807 CHC2 zinc finger ACPL_1453 PF10410 DnaB-helicase binding domain of primase ACPL_1453 PF13662 Toprim domain ACPL_1455 PF00005 ABC transporter ACPL_1457 PF01061 ABC-2 type transporter ACPL_1458 PF03631 Virulence factor BrkB ACPL_1461 PF01593 Flavin containing amine oxidoreductase ACPL_1466 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system ACPL_1467 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system ACPL_1473 PF13411 MerR HTH family regulatory protein ACPL_1474 PF10011 Predicted membrane protein (DUF2254) ACPL_1479 PF16353 Domain of unknown function(DUF4981) ACPL_1479 PF00703 Glycosyl hydrolases family 2 ACPL_1479 PF02837 Glycosyl hydrolases family 2, sugar binding domain ACPL_1479 PF02929 Beta galactosidase small chain ACPL_1479 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ACPL_148 PF01039 Carboxyl transferase domain ACPL_1485 PF01584 CheW-like domain ACPL_1486 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACPL_1486 PF13426 PAS domain ACPL_1486 PF08447 PAS fold ACPL_149 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACPL_149 PF02770 Acyl-CoA dehydrogenase, middle domain ACPL_149 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACPL_1492 PF02522 Aminoglycoside 3-N-acetyltransferase ACPL_1494 PF04055 Radical SAM superfamily ACPL_1496 PF00931 NB-ARC domain ACPL_1496 PF00486 Transcriptional regulatory protein, C terminal ACPL_1496 PF03704 Bacterial transcriptional activator domain ACPL_1499 PF03704 Bacterial transcriptional activator domain ACPL_1499 PF00486 Transcriptional regulatory protein, C terminal ACPL_1499 PF00931 NB-ARC domain ACPL_1504 PF00750 tRNA synthetases class I (R) ACPL_1504 PF05746 DALR anticodon binding domain ACPL_1504 PF03485 Arginyl tRNA synthetase N terminal domain ACPL_1505 PF02872 5'-nucleotidase, C-terminal domain ACPL_1505 PF00149 Calcineurin-like phosphoesterase ACPL_1507 PF13411 MerR HTH family regulatory protein ACPL_1508 PF00069 Protein kinase domain ACPL_151 PF01047 MarR family ACPL_1512 PF01975 Survival protein SurE ACPL_1515 PF13538 UvrD-like helicase C-terminal domain ACPL_152 PF04264 YceI-like domain ACPL_1520 PF00933 Glycosyl hydrolase family 3 N terminal domain ACPL_1521 PF01039 Carboxyl transferase domain ACPL_1522 PF02801 Beta-ketoacyl synthase, C-terminal domain ACPL_1522 PF00109 Beta-ketoacyl synthase, N-terminal domain ACPL_1523 PF00550 Phosphopantetheine attachment site ACPL_1524 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ACPL_1524 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ACPL_1525 PF00698 Acyl transferase domain ACPL_1526 PF13556 PucR C-terminal helix-turn-helix domain ACPL_1526 PF17853 GGDEF-like domain ACPL_1530 PF00749 tRNA synthetases class I (E and Q), catalytic domain ACPL_1531 PF00456 Transketolase, thiamine diphosphate binding domain ACPL_1531 PF17831 Pyruvate dehydrogenase E1 component middle domain ACPL_1532 PF01894 Uncharacterised protein family UPF0047 ACPL_1533 PF02779 Transketolase, pyrimidine binding domain ACPL_1533 PF02780 Transketolase, C-terminal domain ACPL_1534 PF11253 Protein of unknown function (DUF3052) ACPL_1535 PF00578 AhpC/TSA family ACPL_1538 PF04167 Protein of unknown function (DUF402) ACPL_1543 PF01784 NIF3 (NGG1p interacting factor 3) ACPL_1545 PF13456 Reverse transcriptase-like ACPL_1545 PF00300 Histidine phosphatase superfamily (branch 1) ACPL_1546 PF00704 Glycosyl hydrolases family 18 ACPL_1546 PF00553 Cellulose binding domain ACPL_1546 PF00041 Fibronectin type III domain ACPL_1548 PF00474 Sodium:solute symporter family ACPL_1551 PF01925 Sulfite exporter TauE/SafE ACPL_1553 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ACPL_1553 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ACPL_1554 PF00291 Pyridoxal-phosphate dependent enzyme ACPL_1554 PF00585 C-terminal regulatory domain of Threonine dehydratase ACPL_1557 PF01209 ubiE/COQ5 methyltransferase family ACPL_1558 PF02774 Semialdehyde dehydrogenase, dimerisation domain ACPL_1558 PF01118 Semialdehyde dehydrogenase, NAD binding domain ACPL_1561 PF00575 S1 RNA binding domain ACPL_1561 PF08206 Ribonuclease B OB domain ACPL_1561 PF17876 Cold shock domain ACPL_1561 PF00773 RNB domain ACPL_1562 PF02548 Ketopantoate hydroxymethyltransferase ACPL_1563 PF00795 Carbon-nitrogen hydrolase ACPL_1563 PF02540 NAD synthase ACPL_1564 PF00120 Glutamine synthetase, catalytic domain ACPL_1564 PF03951 Glutamine synthetase, beta-Grasp domain ACPL_1565 PF03994 Domain of Unknown Function (DUF350) ACPL_1566 PF06772 Bacterial low temperature requirement A protein (LtrA) ACPL_1567 PF13280 WYL domain ACPL_1567 PF08279 HTH domain ACPL_1569 PF00117 Glutamine amidotransferase class-I ACPL_1569 PF04715 Anthranilate synthase component I, N terminal region ACPL_1569 PF00425 chorismate binding enzyme ACPL_1570 PF03710 Glutamate-ammonia ligase adenylyltransferase ACPL_1570 PF08335 GlnD PII-uridylyltransferase ACPL_1571 PF01047 MarR family ACPL_1574 PF09594 Glycosyltransferase family 87 ACPL_1575 PF00005 ABC transporter ACPL_1575 PF13732 Domain of unknown function (DUF4162) ACPL_1576 PF00196 Bacterial regulatory proteins, luxR family ACPL_1578 PF03951 Glutamine synthetase, beta-Grasp domain ACPL_1578 PF00120 Glutamine synthetase, catalytic domain ACPL_1586 PF00534 Glycosyl transferases group 1 ACPL_1586 PF13439 Glycosyltransferase Family 4 ACPL_159 PF03808 Glycosyl transferase WecB/TagA/CpsF family ACPL_1597 PF00082 Subtilase family ACPL_1598 PF05108 Type VII secretion system ESX-1, transport TM domain B ACPL_160 PF12401 Protein of unknown function (DUF2662) ACPL_160 PF12401 Protein of unknown function (DUF2662) ACPL_160 PF00498 FHA domain ACPL_160 PF00498 FHA domain ACPL_1600 PF01580 FtsK/SpoIIIE family ACPL_1604 PF00004 ATPase family associated with various cellular activities (AAA) ACPL_1604 PF17866 AAA lid domain ACPL_1606 PF13829 Domain of unknown function (DUF4191) ACPL_1608 PF00211 Adenylate and Guanylate cyclase catalytic domain ACPL_1608 PF13191 AAA ATPase domain ACPL_161 PF16697 Inner membrane component of T3SS, cytoplasmic domain ACPL_1610 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family ACPL_1610 PF04055 Radical SAM superfamily ACPL_1611 PF00152 tRNA synthetases class II (D, K and N) ACPL_1611 PF01336 OB-fold nucleic acid binding domain ACPL_1613 PF03099 Biotin/lipoate A/B protein ligase family ACPL_1615 PF08338 Domain of unknown function (DUF1731) ACPL_1615 PF01370 NAD dependent epimerase/dehydratase family ACPL_1616 PF00364 Biotin-requiring enzyme ACPL_1616 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ACPL_1616 PF02817 e3 binding domain ACPL_1617 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ACPL_1617 PF00364 Biotin-requiring enzyme ACPL_1617 PF02817 e3 binding domain ACPL_1618 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ACPL_1618 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACPL_1620 PF00883 Cytosol aminopeptidase family, catalytic domain ACPL_1620 PF02789 Cytosol aminopeptidase family, N-terminal domain ACPL_1621 PF01571 Aminomethyltransferase folate-binding domain ACPL_1621 PF08669 Glycine cleavage T-protein C-terminal barrel domain ACPL_1622 PF02654 Cobalamin-5-phosphate synthase ACPL_1623 PF02277 Phosphoribosyltransferase ACPL_1626 PF00248 Aldo/keto reductase family ACPL_163 PF01098 Cell cycle protein ACPL_1631 PF00005 ABC transporter ACPL_1631 PF09383 NIL domain ACPL_1634 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ACPL_1635 PF02445 Quinolinate synthetase A protein ACPL_1636 PF02595 Glycerate kinase family ACPL_1637 PF01521 Iron-sulphur cluster biosynthesis ACPL_1638 PF00294 pfkB family carbohydrate kinase ACPL_164 PF00905 Penicillin binding protein transpeptidase domain ACPL_1640 PF01206 Sulfurtransferase TusA ACPL_1641 PF00266 Aminotransferase class-V ACPL_1642 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ACPL_1643 PF12270 Cytochrome c oxidase subunit IV ACPL_1645 PF02885 Glycosyl transferase family, helical bundle domain ACPL_1645 PF00591 Glycosyl transferase family, a/b domain ACPL_1647 PF05425 Copper resistance protein D ACPL_1647 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) ACPL_1648 PF00510 Cytochrome c oxidase subunit III ACPL_1649 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ACPL_1649 PF00034 Cytochrome c ACPL_165 PF00069 Protein kinase domain ACPL_1650 PF00355 Rieske [2Fe-2S] domain ACPL_1651 PF13631 Cytochrome b(N-terminal)/b6/petB ACPL_1656 PF00483 Nucleotidyl transferase ACPL_1658 PF02824 TGS domain ACPL_1658 PF13291 ACT domain ACPL_1658 PF04607 Region found in RelA / SpoT proteins ACPL_1659 PF01541 GIY-YIG catalytic domain ACPL_1659 PF00929 Exonuclease ACPL_166 PF00069 Protein kinase domain ACPL_166 PF03793 PASTA domain ACPL_1662 PF01435 Peptidase family M48 ACPL_1662 PF16491 CAAX prenyl protease N-terminal, five membrane helices ACPL_1663 PF13439 Glycosyltransferase Family 4 ACPL_1663 PF00534 Glycosyl transferases group 1 ACPL_1665 PF00005 ABC transporter ACPL_1665 PF00664 ABC transporter transmembrane region ACPL_167 PF00117 Glutamine amidotransferase class-I ACPL_1670 PF00072 Response regulator receiver domain ACPL_1670 PF00196 Bacterial regulatory proteins, luxR family ACPL_1671 PF17200 Single Cache domain 2 ACPL_1671 PF07730 Histidine kinase ACPL_1674 PF00480 ROK family ACPL_1676 PF00743 Flavin-binding monooxygenase-like ACPL_1678 PF00982 Glycosyltransferase family 20 ACPL_1680 PF01553 Acyltransferase ACPL_1681 PF00027 Cyclic nucleotide-binding domain ACPL_1681 PF13545 Crp-like helix-turn-helix domain ACPL_1683 PF16473 3' exoribonuclease, RNase T-like ACPL_1685 PF07690 Major Facilitator Superfamily ACPL_1686 PF00365 Phosphofructokinase ACPL_1687 PF14748 Pyrroline-5-carboxylate reductase dimerisation ACPL_1687 PF03807 NADP oxidoreductase coenzyme F420-dependent ACPL_1689 PF01266 FAD dependent oxidoreductase ACPL_1696 PF00255 Glutathione peroxidase ACPL_1697 PF00704 Glycosyl hydrolases family 18 ACPL_1697 PF00553 Cellulose binding domain ACPL_1697 PF00041 Fibronectin type III domain ACPL_1698 PF01474 Class-II DAHP synthetase family ACPL_1699 PF01212 Beta-eliminating lyase ACPL_1702 PF01261 Xylose isomerase-like TIM barrel ACPL_1703 PF00069 Protein kinase domain ACPL_1703 PF03793 PASTA domain ACPL_1709 PF02219 Methylenetetrahydrofolate reductase ACPL_171 PF06781 Cell division protein CrgA ACPL_1712 PF00144 Beta-lactamase ACPL_1713 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ACPL_1713 PF13378 Enolase C-terminal domain-like ACPL_1719 PF00440 Bacterial regulatory proteins, tetR family ACPL_1719 PF17925 Tetracyclin repressor-like, C-terminal domain ACPL_172 PF13183 4Fe-4S dicluster domain ACPL_172 PF02754 Cysteine-rich domain ACPL_1721 PF13085 2Fe-2S iron-sulfur cluster binding domain ACPL_1722 PF00890 FAD binding domain ACPL_1722 PF02910 Fumarate reductase flavoprotein C-term ACPL_1724 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACPL_1724 PF03466 LysR substrate binding domain ACPL_1727 PF01593 Flavin containing amine oxidoreductase ACPL_173 PF03471 Transporter associated domain ACPL_173 PF00571 CBS domain ACPL_173 PF01595 Cyclin M transmembrane N-terminal domain ACPL_1732 PF00106 short chain dehydrogenase ACPL_174 PF01595 Cyclin M transmembrane N-terminal domain ACPL_174 PF00571 CBS domain ACPL_1740 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ACPL_1740 PF14579 Helix-hairpin-helix motif ACPL_1740 PF02811 PHP domain ACPL_1740 PF07733 Bacterial DNA polymerase III alpha NTPase domain ACPL_1747 PF17863 AAA lid domain ACPL_1747 PF07726 ATPase family associated with various cellular activities (AAA) ACPL_1748 PF09334 tRNA synthetases class I (M) ACPL_1748 PF08264 Anticodon-binding domain of tRNA ACPL_1748 PF13603 Leucyl-tRNA synthetase, Domain 2 ACPL_1750 PF07685 CobB/CobQ-like glutamine amidotransferase domain ACPL_1751 PF08245 Mur ligase middle domain ACPL_1753 PF02381 MraZ protein, putative antitoxin-like ACPL_1754 PF01795 MraW methylase family ACPL_1756 PF03717 Penicillin-binding Protein dimerisation domain ACPL_1756 PF00905 Penicillin binding protein transpeptidase domain ACPL_1757 PF08245 Mur ligase middle domain ACPL_1757 PF02875 Mur ligase family, glutamate ligase domain ACPL_1757 PF01225 Mur ligase family, catalytic domain ACPL_1758 PF02875 Mur ligase family, glutamate ligase domain ACPL_1758 PF08245 Mur ligase middle domain ACPL_1758 PF01225 Mur ligase family, catalytic domain ACPL_1759 PF00953 Glycosyl transferase family 4 ACPL_1759 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 ACPL_1760 PF01098 Cell cycle protein ACPL_1761 PF03033 Glycosyltransferase family 28 N-terminal domain ACPL_1761 PF04101 Glycosyltransferase family 28 C-terminal domain ACPL_1762 PF01225 Mur ligase family, catalytic domain ACPL_1762 PF02875 Mur ligase family, glutamate ligase domain ACPL_1762 PF08245 Mur ligase middle domain ACPL_1764 PF00091 Tubulin/FtsZ family, GTPase domain ACPL_1764 PF12327 FtsZ family, C-terminal domain ACPL_1765 PF01168 Alanine racemase, N-terminal domain ACPL_1766 PF04472 Cell division protein SepF ACPL_1768 PF05103 DivIVA protein ACPL_177 PF00692 dUTPase ACPL_1772 PF01252 Signal peptidase (SPase) II ACPL_1773 PF00849 RNA pseudouridylate synthase ACPL_1776 PF02811 PHP domain ACPL_1776 PF14579 Helix-hairpin-helix motif ACPL_1776 PF07733 Bacterial DNA polymerase III alpha NTPase domain ACPL_1776 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ACPL_1778 PF00004 ATPase family associated with various cellular activities (AAA) ACPL_1778 PF05362 Lon protease (S16) C-terminal proteolytic domain ACPL_1778 PF02190 ATP-dependent protease La (LON) substrate-binding domain ACPL_1779 PF00815 Histidinol dehydrogenase ACPL_1780 PF00155 Aminotransferase class I and II ACPL_1781 PF00475 Imidazoleglycerol-phosphate dehydratase ACPL_1782 PF00117 Glutamine amidotransferase class-I ACPL_1784 PF00977 Histidine biosynthesis protein ACPL_1785 PF00977 Histidine biosynthesis protein ACPL_1789 PF00155 Aminotransferase class I and II ACPL_1791 PF00501 AMP-binding enzyme ACPL_1792 PF00294 pfkB family carbohydrate kinase ACPL_1794 PF00155 Aminotransferase class I and II ACPL_1794 PF00392 Bacterial regulatory proteins, gntR family ACPL_1795 PF13520 Amino acid permease ACPL_1797 PF00664 ABC transporter transmembrane region ACPL_1797 PF00005 ABC transporter ACPL_1798 PF00005 ABC transporter ACPL_1798 PF00664 ABC transporter transmembrane region ACPL_1799 PF01479 S4 domain ACPL_1799 PF00163 Ribosomal protein S4/S9 N-terminal domain ACPL_180 PF00156 Phosphoribosyl transferase domain ACPL_1802 PF01502 Phosphoribosyl-AMP cyclohydrolase ACPL_1803 PF00425 chorismate binding enzyme ACPL_1803 PF04715 Anthranilate synthase component I, N terminal region ACPL_1806 PF00218 Indole-3-glycerol phosphate synthase ACPL_1807 PF00291 Pyridoxal-phosphate dependent enzyme ACPL_1808 PF00290 Tryptophan synthase alpha chain ACPL_1809 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ACPL_1809 PF01243 Pyridoxamine 5'-phosphate oxidase ACPL_181 PF07228 Stage II sporulation protein E (SpoIIE) ACPL_181 PF00672 HAMP domain ACPL_1810 PF01790 Prolipoprotein diacylglyceryl transferase ACPL_1811 PF01266 FAD dependent oxidoreductase ACPL_1811 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ACPL_1813 PF01493 GXGXG motif ACPL_1813 PF01645 Conserved region in glutamate synthase ACPL_1813 PF04898 Glutamate synthase central domain ACPL_1813 PF00310 Glutamine amidotransferases class-II ACPL_1814 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACPL_1814 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ACPL_1815 PF02887 Pyruvate kinase, alpha/beta domain ACPL_1815 PF00224 Pyruvate kinase, barrel domain ACPL_1818 PF00072 Response regulator receiver domain ACPL_1818 PF03861 ANTAR domain ACPL_1820 PF02653 Branched-chain amino acid transport system / permease component ACPL_1821 PF11862 Domain of unknown function (DUF3382) ACPL_1821 PF02653 Branched-chain amino acid transport system / permease component ACPL_1822 PF00005 ABC transporter ACPL_1822 PF12399 Branched-chain amino acid ATP-binding cassette transporter ACPL_1823 PF00005 ABC transporter ACPL_1824 PF00497 Bacterial extracellular solute-binding proteins, family 3 ACPL_1825 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_1826 PF00005 ABC transporter ACPL_1827 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ACPL_1827 PF00476 DNA polymerase family A ACPL_1827 PF01367 5'-3' exonuclease, C-terminal SAM fold ACPL_183 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACPL_183 PF12806 Acetyl-CoA dehydrogenase C-terminal like ACPL_183 PF02770 Acyl-CoA dehydrogenase, middle domain ACPL_183 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACPL_1831 PF01209 ubiE/COQ5 methyltransferase family ACPL_1832 PF00575 S1 RNA binding domain ACPL_1833 PF04229 GrpB protein ACPL_1833 PF01121 Dephospho-CoA kinase ACPL_1834 PF00271 Helicase conserved C-terminal domain ACPL_1834 PF04851 Type III restriction enzyme, res subunit ACPL_1834 PF02151 UvrB/uvrC motif ACPL_1834 PF12344 Ultra-violet resistance protein B ACPL_1834 PF17757 UvrB interaction domain ACPL_1836 PF03992 Antibiotic biosynthesis monooxygenase ACPL_1837 PF03741 Integral membrane protein TerC family ACPL_1840 PF00298 Ribosomal protein L11, RNA binding domain ACPL_1840 PF03946 Ribosomal protein L11, N-terminal domain ACPL_1841 PF00574 Clp protease ACPL_1844 PF00753 Metallo-beta-lactamase superfamily ACPL_1844 PF16123 Hydroxyacylglutathione hydrolase C-terminus ACPL_1846 PF03193 RsgA GTPase ACPL_1848 PF17760 UvrA interaction domain ACPL_1848 PF17755 UvrA DNA-binding domain ACPL_1848 PF00005 ABC transporter ACPL_1850 PF02151 UvrB/uvrC motif ACPL_1850 PF08459 UvrC Helix-hairpin-helix N-terminal ACPL_1850 PF01541 GIY-YIG catalytic domain ACPL_1851 PF03668 P-loop ATPase protein family ACPL_1852 PF01933 Uncharacterised protein family UPF0052 ACPL_1853 PF02650 WhiA C-terminal HTH domain ACPL_1853 PF14527 WhiA LAGLIDADG-like domain ACPL_1853 PF10298 WhiA N-terminal LAGLIDADG-like domain ACPL_1854 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ACPL_1854 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ACPL_1855 PF00162 Phosphoglycerate kinase ACPL_1856 PF00121 Triosephosphate isomerase ACPL_1857 PF03840 Preprotein translocase SecG subunit ACPL_186 PF03006 Haemolysin-III related ACPL_1861 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ACPL_1863 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ACPL_1863 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ACPL_1864 PF00923 Transaldolase/Fructose-6-phosphate aldolase ACPL_1865 PF02779 Transketolase, pyrimidine binding domain ACPL_1865 PF02780 Transketolase, C-terminal domain ACPL_1865 PF00456 Transketolase, thiamine diphosphate binding domain ACPL_1866 PF01040 UbiA prenyltransferase family ACPL_1869 PF02628 Cytochrome oxidase assembly protein ACPL_187 PF03746 LamB/YcsF family ACPL_1871 PF01458 Uncharacterized protein family (UPF0051) ACPL_1872 PF01458 Uncharacterized protein family (UPF0051) ACPL_1874 PF00005 ABC transporter ACPL_1875 PF00266 Aminotransferase class-V ACPL_1876 PF01592 NifU-like N terminal domain ACPL_1877 PF01883 Iron-sulfur cluster assembly protein ACPL_1881 PF00561 alpha/beta hydrolase fold ACPL_1883 PF00300 Histidine phosphatase superfamily (branch 1) ACPL_1887 PF04228 Putative neutral zinc metallopeptidase ACPL_189 PF08281 Sigma-70, region 4 ACPL_189 PF04542 Sigma-70 region 2 ACPL_1890 PF00378 Enoyl-CoA hydratase/isomerase ACPL_1891 PF00664 ABC transporter transmembrane region ACPL_1891 PF00005 ABC transporter ACPL_1892 PF03167 Uracil DNA glycosylase superfamily ACPL_1896 PF00440 Bacterial regulatory proteins, tetR family ACPL_190 PF02683 Cytochrome C biogenesis protein transmembrane region ACPL_190 PF17991 Thioredoxin like C-terminal domain ACPL_190 PF00578 AhpC/TSA family ACPL_1900 PF10944 Protein of unknown function (DUF2630) ACPL_1902 PF00694 Aconitase C-terminal domain ACPL_1902 PF00330 Aconitase family (aconitate hydratase) ACPL_1905 PF00557 Metallopeptidase family M24 ACPL_1905 PF05195 Aminopeptidase P, N-terminal domain ACPL_1907 PF00294 pfkB family carbohydrate kinase ACPL_1912 PF17863 AAA lid domain ACPL_1912 PF07726 ATPase family associated with various cellular activities (AAA) ACPL_1913 PF01882 Protein of unknown function DUF58 ACPL_1914 PF07584 Aerotolerance regulator N-terminal ACPL_1914 PF13519 von Willebrand factor type A domain ACPL_1915 PF00196 Bacterial regulatory proteins, luxR family ACPL_1915 PF00072 Response regulator receiver domain ACPL_1916 PF07730 Histidine kinase ACPL_1920 PF13344 Haloacid dehalogenase-like hydrolase ACPL_1922 PF00293 NUDIX domain ACPL_1922 PF13344 Haloacid dehalogenase-like hydrolase ACPL_1927 PF00155 Aminotransferase class I and II ACPL_1927 PF00392 Bacterial regulatory proteins, gntR family ACPL_1929 PF00144 Beta-lactamase ACPL_193 PF00364 Biotin-requiring enzyme ACPL_193 PF02817 e3 binding domain ACPL_193 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ACPL_1931 PF01145 SPFH domain / Band 7 family ACPL_1933 PF00588 SpoU rRNA Methylase family ACPL_1934 PF13302 Acetyltransferase (GNAT) domain ACPL_1938 PF08245 Mur ligase middle domain ACPL_1939 PF01380 SIS domain ACPL_1939 PF01418 Helix-turn-helix domain, rpiR family ACPL_194 PF02780 Transketolase, C-terminal domain ACPL_194 PF02779 Transketolase, pyrimidine binding domain ACPL_1941 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_1942 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_1944 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_1945 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_1946 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ACPL_1946 PF00476 DNA polymerase family A ACPL_1946 PF01612 3'-5' exonuclease ACPL_1946 PF01367 5'-3' exonuclease, C-terminal SAM fold ACPL_1947 PF02607 B12 binding domain ACPL_1947 PF02965 Vitamin B12 dependent methionine synthase, activation domain ACPL_1947 PF02574 Homocysteine S-methyltransferase ACPL_1947 PF00809 Pterin binding enzyme ACPL_1947 PF02310 B12 binding domain ACPL_195 PF00676 Dehydrogenase E1 component ACPL_1953 PF07730 Histidine kinase ACPL_1954 PF00196 Bacterial regulatory proteins, luxR family ACPL_1954 PF00072 Response regulator receiver domain ACPL_1955 PF13344 Haloacid dehalogenase-like hydrolase ACPL_1955 PF00293 NUDIX domain ACPL_1956 PF00990 Diguanylate cyclase, GGDEF domain ACPL_1956 PF00072 Response regulator receiver domain ACPL_1962 PF00117 Glutamine amidotransferase class-I ACPL_1962 PF00425 chorismate binding enzyme ACPL_1964 PF00486 Transcriptional regulatory protein, C terminal ACPL_1964 PF00072 Response regulator receiver domain ACPL_1969 PF03733 Inner membrane component domain ACPL_1974 PF01070 FMN-dependent dehydrogenase ACPL_1975 PF11799 impB/mucB/samB family C-terminal domain ACPL_1975 PF00817 impB/mucB/samB family ACPL_1976 PF00115 Cytochrome C and Quinol oxidase polypeptide I ACPL_1978 PF17933 Tetracyclin repressor-like, C-terminal domain ACPL_1978 PF00440 Bacterial regulatory proteins, tetR family ACPL_1981 PF16859 Tetracyclin repressor-like, C-terminal domain ACPL_1981 PF00440 Bacterial regulatory proteins, tetR family ACPL_1982 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family ACPL_1985 PF00501 AMP-binding enzyme ACPL_1985 PF13193 AMP-binding enzyme C-terminal domain ACPL_1987 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ACPL_1987 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ACPL_1988 PF03793 PASTA domain ACPL_1988 PF00069 Protein kinase domain ACPL_1990 PF10042 Uncharacterized conserved protein (DUF2278) ACPL_1993 PF00440 Bacterial regulatory proteins, tetR family ACPL_1993 PF08361 MAATS-type transcriptional repressor, C-terminal region ACPL_1995 PF01595 Cyclin M transmembrane N-terminal domain ACPL_1995 PF03471 Transporter associated domain ACPL_1995 PF00571 CBS domain ACPL_1996 PF17200 Single Cache domain 2 ACPL_1996 PF00672 HAMP domain ACPL_1996 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACPL_200 PF00012 Hsp70 protein ACPL_2001 PF00990 Diguanylate cyclase, GGDEF domain ACPL_2001 PF08448 PAS fold ACPL_2004 PF05368 NmrA-like family ACPL_2006 PF00384 Molybdopterin oxidoreductase ACPL_2006 PF01568 Molydopterin dinucleotide binding domain ACPL_2008 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_2009 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_201 PF01025 GrpE ACPL_2011 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_2011 PF00512 His Kinase A (phospho-acceptor) domain ACPL_2011 PF00989 PAS fold ACPL_2012 PF02702 Osmosensitive K+ channel His kinase sensor domain ACPL_2012 PF00512 His Kinase A (phospho-acceptor) domain ACPL_2012 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_2012 PF13492 GAF domain ACPL_2012 PF13493 Domain of unknown function (DUF4118) ACPL_2013 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_2013 PF00512 His Kinase A (phospho-acceptor) domain ACPL_2013 PF00497 Bacterial extracellular solute-binding proteins, family 3 ACPL_2013 PF00072 Response regulator receiver domain ACPL_2016 PF00512 His Kinase A (phospho-acceptor) domain ACPL_2016 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_2017 PF01494 FAD binding domain ACPL_202 PF00226 DnaJ domain ACPL_202 PF00684 DnaJ central domain ACPL_202 PF01556 DnaJ C terminal domain ACPL_2020 PF00672 HAMP domain ACPL_2020 PF00512 His Kinase A (phospho-acceptor) domain ACPL_2020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_2024 PF13649 Methyltransferase domain ACPL_2025 PF00723 Glycosyl hydrolases family 15 ACPL_2026 PF00565 Staphylococcal nuclease homologue ACPL_2026 PF05901 Excalibur calcium-binding domain ACPL_2027 PF00248 Aldo/keto reductase family ACPL_203 PF13411 MerR HTH family regulatory protein ACPL_2035 PF16861 Carbamoyltransferase C-terminus ACPL_2035 PF02543 Carbamoyltransferase N-terminus ACPL_2038 PF00701 Dihydrodipicolinate synthetase family ACPL_2041 PF13407 Periplasmic binding protein domain ACPL_2042 PF00005 ABC transporter ACPL_2043 PF02653 Branched-chain amino acid transport system / permease component ACPL_2044 PF02653 Branched-chain amino acid transport system / permease component ACPL_2049 PF03816 Cell envelope-related transcriptional attenuator domain ACPL_2050 PF00535 Glycosyl transferase family 2 ACPL_2051 PF00534 Glycosyl transferases group 1 ACPL_2053 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACPL_2053 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ACPL_2056 PF09900 Predicted membrane protein (DUF2127) ACPL_2058 PF01545 Cation efflux family ACPL_2058 PF16916 Dimerisation domain of Zinc Transporter ACPL_2062 PF11495 Archaeal transcriptional regulator TrmB ACPL_2062 PF01978 Sugar-specific transcriptional regulator TrmB ACPL_2067 PF00072 Response regulator receiver domain ACPL_2067 PF00990 Diguanylate cyclase, GGDEF domain ACPL_2069 PF06271 RDD family ACPL_207 PF07690 Major Facilitator Superfamily ACPL_2070 PF03060 Nitronate monooxygenase ACPL_2075 PF01594 AI-2E family transporter ACPL_2076 PF00155 Aminotransferase class I and II ACPL_2079 PF01522 Polysaccharide deacetylase ACPL_208 PF17871 AAA lid domain ACPL_208 PF00004 ATPase family associated with various cellular activities (AAA) ACPL_208 PF10431 C-terminal, D2-small domain, of ClpB protein ACPL_208 PF07724 AAA domain (Cdc48 subfamily) ACPL_208 PF02861 Clp amino terminal domain, pathogenicity island component ACPL_2082 PF00248 Aldo/keto reductase family ACPL_2087 PF01842 ACT domain ACPL_2087 PF00551 Formyl transferase ACPL_2090 PF01384 Phosphate transporter family ACPL_2092 PF05103 DivIVA protein ACPL_2101 PF00072 Response regulator receiver domain ACPL_2101 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_2101 PF00512 His Kinase A (phospho-acceptor) domain ACPL_2101 PF13188 PAS domain ACPL_2101 PF08448 PAS fold ACPL_2109 PF01434 Peptidase family M41 ACPL_2109 PF00004 ATPase family associated with various cellular activities (AAA) ACPL_2109 PF17862 AAA+ lid domain ACPL_2109 PF06480 FtsH Extracellular ACPL_2112 PF13185 GAF domain ACPL_2112 PF00990 Diguanylate cyclase, GGDEF domain ACPL_2115 PF01551 Peptidase family M23 ACPL_2115 PF10145 Phage-related minor tail protein ACPL_2115 PF01464 Transglycosylase SLT domain ACPL_2116 PF13091 PLD-like domain ACPL_2118 PF00376 MerR family regulatory protein ACPL_2118 PF09278 MerR, DNA binding ACPL_212 PF01022 Bacterial regulatory protein, arsR family ACPL_2120 PF13302 Acetyltransferase (GNAT) domain ACPL_2121 PF13350 Tyrosine phosphatase family ACPL_2122 PF01243 Pyridoxamine 5'-phosphate oxidase ACPL_2122 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ACPL_2123 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ACPL_2123 PF01568 Molydopterin dinucleotide binding domain ACPL_2123 PF00384 Molybdopterin oxidoreductase ACPL_2124 PF01734 Patatin-like phospholipase ACPL_2129 PF13439 Glycosyltransferase Family 4 ACPL_2129 PF00534 Glycosyl transferases group 1 ACPL_213 PF00596 Class II Aldolase and Adducin N-terminal domain ACPL_2131 PF00535 Glycosyl transferase family 2 ACPL_2131 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 ACPL_2133 PF02785 Biotin carboxylase C-terminal domain ACPL_2133 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ACPL_2133 PF00289 Biotin carboxylase, N-terminal domain ACPL_2139 PF13086 AAA domain ACPL_2139 PF13087 AAA domain ACPL_2139 PF13195 Protein of unknown function (DUF4011) ACPL_214 PF09335 SNARE associated Golgi protein ACPL_2140 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ACPL_2140 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ACPL_2141 PF00202 Aminotransferase class-III ACPL_2142 PF17853 GGDEF-like domain ACPL_2142 PF13556 PucR C-terminal helix-turn-helix domain ACPL_2144 PF00067 Cytochrome P450 ACPL_2145 PF01341 Glycosyl hydrolases family 6 ACPL_2145 PF00553 Cellulose binding domain ACPL_2147 PF00210 Ferritin-like domain ACPL_2149 PF01726 LexA DNA binding domain ACPL_2149 PF00717 Peptidase S24-like ACPL_215 PF00149 Calcineurin-like phosphoesterase ACPL_2150 PF01374 Glycosyl hydrolase family 46 ACPL_2152 PF01547 Bacterial extracellular solute-binding protein ACPL_2153 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_2154 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_2155 PF11975 Family 4 glycosyl hydrolase C-terminal domain ACPL_2155 PF02056 Family 4 glycosyl hydrolase ACPL_2160 PF00672 HAMP domain ACPL_2160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACPL_2161 PF07971 Glycosyl hydrolase family 92 ACPL_2161 PF17678 Glycosyl hydrolase family 92 N-terminal domain ACPL_2162 PF00356 Bacterial regulatory proteins, lacI family ACPL_2166 PF14765 Polyketide synthase dehydratase ACPL_2166 PF08659 KR domain ACPL_2166 PF00550 Phosphopantetheine attachment site ACPL_2166 PF00109 Beta-ketoacyl synthase, N-terminal domain ACPL_2166 PF08240 Alcohol dehydrogenase GroES-like domain ACPL_2166 PF16197 Ketoacyl-synthetase C-terminal extension ACPL_2166 PF00698 Acyl transferase domain ACPL_2166 PF02801 Beta-ketoacyl synthase, C-terminal domain ACPL_2167 PF13188 PAS domain ACPL_2167 PF08448 PAS fold ACPL_2167 PF00072 Response regulator receiver domain ACPL_2167 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_2167 PF00512 His Kinase A (phospho-acceptor) domain ACPL_2169 PF01522 Polysaccharide deacetylase ACPL_2173 PF00732 GMC oxidoreductase ACPL_2173 PF05199 GMC oxidoreductase ACPL_2175 PF02770 Acyl-CoA dehydrogenase, middle domain ACPL_2175 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACPL_2175 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACPL_2176 PF08240 Alcohol dehydrogenase GroES-like domain ACPL_2176 PF00107 Zinc-binding dehydrogenase ACPL_2177 PF00982 Glycosyltransferase family 20 ACPL_2178 PF01613 Flavin reductase like domain ACPL_218 PF01116 Fructose-bisphosphate aldolase class-II ACPL_2180 PF07690 Major Facilitator Superfamily ACPL_2181 PF00106 short chain dehydrogenase ACPL_2182 PF05977 Transmembrane secretion effector ACPL_2184 PF00561 alpha/beta hydrolase fold ACPL_2186 PF01070 FMN-dependent dehydrogenase ACPL_2187 PF02668 Taurine catabolism dioxygenase TauD, TfdA family ACPL_2188 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_2189 PF12911 N-terminal TM domain of oligopeptide transport permease C ACPL_2189 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_2190 PF00005 ABC transporter ACPL_2190 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ACPL_2192 PF00512 His Kinase A (phospho-acceptor) domain ACPL_2192 PF00072 Response regulator receiver domain ACPL_2192 PF13188 PAS domain ACPL_2192 PF08448 PAS fold ACPL_2192 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_2194 PF00672 HAMP domain ACPL_2194 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACPL_2194 PF17200 Single Cache domain 2 ACPL_2195 PF07690 Major Facilitator Superfamily ACPL_2197 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ACPL_2197 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACPL_2198 PF00072 Response regulator receiver domain ACPL_2198 PF00196 Bacterial regulatory proteins, luxR family ACPL_2199 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_2199 PF07730 Histidine kinase ACPL_2205 PF00486 Transcriptional regulatory protein, C terminal ACPL_2205 PF00072 Response regulator receiver domain ACPL_2206 PF00512 His Kinase A (phospho-acceptor) domain ACPL_2206 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_2206 PF00672 HAMP domain ACPL_2225 PF00004 ATPase family associated with various cellular activities (AAA) ACPL_2228 PF17863 AAA lid domain ACPL_2228 PF07726 ATPase family associated with various cellular activities (AAA) ACPL_2244 PF00512 His Kinase A (phospho-acceptor) domain ACPL_2244 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_2244 PF08521 Two-component sensor kinase N-terminal ACPL_2245 PF00486 Transcriptional regulatory protein, C terminal ACPL_2245 PF00072 Response regulator receiver domain ACPL_2247 PF04107 Glutamate-cysteine ligase family 2(GCS2) ACPL_2253 PF01339 CheB methylesterase ACPL_2253 PF00072 Response regulator receiver domain ACPL_2258 PF07687 Peptidase dimerisation domain ACPL_2258 PF01546 Peptidase family M20/M25/M40 ACPL_2259 PF04542 Sigma-70 region 2 ACPL_2259 PF04539 Sigma-70 region 3 ACPL_2259 PF04545 Sigma-70, region 4 ACPL_226 PF00709 Adenylosuccinate synthetase ACPL_2260 PF08448 PAS fold ACPL_2260 PF00072 Response regulator receiver domain ACPL_2260 PF13426 PAS domain ACPL_2260 PF00512 His Kinase A (phospho-acceptor) domain ACPL_2260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_2265 PF17863 AAA lid domain ACPL_2265 PF07726 ATPase family associated with various cellular activities (AAA) ACPL_227 PF02844 Phosphoribosylglycinamide synthetase, N domain ACPL_227 PF02843 Phosphoribosylglycinamide synthetase, C domain ACPL_227 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ACPL_2273 PF07689 KaiB domain ACPL_2273 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_2274 PF00512 His Kinase A (phospho-acceptor) domain ACPL_2274 PF18415 Histidine kinase receptor ArcB trans-membrane domain ACPL_2274 PF00989 PAS fold ACPL_2274 PF00072 Response regulator receiver domain ACPL_2274 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_2274 PF01627 Hpt domain ACPL_2276 PF01209 ubiE/COQ5 methyltransferase family ACPL_2277 PF07690 Major Facilitator Superfamily ACPL_2279 PF01546 Peptidase family M20/M25/M40 ACPL_2279 PF07687 Peptidase dimerisation domain ACPL_2281 PF00266 Aminotransferase class-V ACPL_2282 PF17678 Glycosyl hydrolase family 92 N-terminal domain ACPL_2282 PF07971 Glycosyl hydrolase family 92 ACPL_2287 PF00376 MerR family regulatory protein ACPL_2287 PF09278 MerR, DNA binding ACPL_2291 PF16197 Ketoacyl-synthetase C-terminal extension ACPL_2291 PF08659 KR domain ACPL_2291 PF00109 Beta-ketoacyl synthase, N-terminal domain ACPL_2291 PF00550 Phosphopantetheine attachment site ACPL_2291 PF02801 Beta-ketoacyl synthase, C-terminal domain ACPL_2291 PF08240 Alcohol dehydrogenase GroES-like domain ACPL_2291 PF00698 Acyl transferase domain ACPL_2291 PF08990 Erythronolide synthase docking ACPL_2291 PF14765 Polyketide synthase dehydratase ACPL_2293 PF11208 Protein of unknown function (DUF2992) ACPL_2295 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ACPL_230 PF00206 Lyase ACPL_230 PF10397 Adenylosuccinate lyase C-terminus ACPL_2307 PF00356 Bacterial regulatory proteins, lacI family ACPL_231 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase ACPL_2310 PF07690 Major Facilitator Superfamily ACPL_2313 PF00596 Class II Aldolase and Adducin N-terminal domain ACPL_2314 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ACPL_2314 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ACPL_2315 PF02754 Cysteine-rich domain ACPL_2316 PF02589 LUD domain ACPL_2316 PF11870 Domain of unknown function (DUF3390) ACPL_2316 PF13183 4Fe-4S dicluster domain ACPL_2317 PF02589 LUD domain ACPL_2318 PF00072 Response regulator receiver domain ACPL_2318 PF01627 Hpt domain ACPL_2318 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_2318 PF00512 His Kinase A (phospho-acceptor) domain ACPL_2319 PF00072 Response regulator receiver domain ACPL_2319 PF00486 Transcriptional regulatory protein, C terminal ACPL_2320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_2320 PF00512 His Kinase A (phospho-acceptor) domain ACPL_2320 PF00989 PAS fold ACPL_2323 PF00529 HlyD membrane-fusion protein of T1SS ACPL_2323 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ACPL_2324 PF12704 MacB-like periplasmic core domain ACPL_2324 PF02687 FtsX-like permease family ACPL_2324 PF00005 ABC transporter ACPL_2325 PF12704 MacB-like periplasmic core domain ACPL_2325 PF00005 ABC transporter ACPL_2325 PF02687 FtsX-like permease family ACPL_2329 PF07687 Peptidase dimerisation domain ACPL_2329 PF01546 Peptidase family M20/M25/M40 ACPL_233 PF00586 AIR synthase related protein, N-terminal domain ACPL_233 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ACPL_233 PF02769 AIR synthase related protein, C-terminal domain ACPL_2332 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ACPL_2332 PF13378 Enolase C-terminal domain-like ACPL_2335 PF00202 Aminotransferase class-III ACPL_2346 PF13732 Domain of unknown function (DUF4162) ACPL_2346 PF00005 ABC transporter ACPL_2349 PF00561 alpha/beta hydrolase fold ACPL_2350 PF00005 ABC transporter ACPL_2351 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_2352 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_2354 PF01614 Bacterial transcriptional regulator ACPL_2354 PF09339 IclR helix-turn-helix domain ACPL_2358 PF00919 Uncharacterized protein family UPF0004 ACPL_2358 PF04055 Radical SAM superfamily ACPL_2358 PF01938 TRAM domain ACPL_2359 PF07694 5TMR of 5TMR-LYT ACPL_2359 PF00990 Diguanylate cyclase, GGDEF domain ACPL_236 PF00156 Phosphoribosyl transferase domain ACPL_2364 PF09335 SNARE associated Golgi protein ACPL_2365 PF01494 FAD binding domain ACPL_2366 PF01614 Bacterial transcriptional regulator ACPL_2366 PF09339 IclR helix-turn-helix domain ACPL_2367 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal ACPL_2367 PF00775 Dioxygenase ACPL_2368 PF00775 Dioxygenase ACPL_2368 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal ACPL_2369 PF00206 Lyase ACPL_2369 PF10397 Adenylosuccinate lyase C-terminus ACPL_237 PF02769 AIR synthase related protein, C-terminal domain ACPL_237 PF00586 AIR synthase related protein, N-terminal domain ACPL_2370 PF02627 Carboxymuconolactone decarboxylase family ACPL_2371 PF05506 Domain of unknown function (DUF756) ACPL_2371 PF04185 Phosphoesterase family ACPL_2376 PF00072 Response regulator receiver domain ACPL_2376 PF00196 Bacterial regulatory proteins, luxR family ACPL_2379 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_2379 PF13188 PAS domain ACPL_2379 PF08448 PAS fold ACPL_2379 PF00512 His Kinase A (phospho-acceptor) domain ACPL_2379 PF00072 Response regulator receiver domain ACPL_238 PF04055 Radical SAM superfamily ACPL_2382 PF00056 lactate/malate dehydrogenase, NAD binding domain ACPL_2382 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ACPL_2386 PF00005 ABC transporter ACPL_2387 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_2388 PF02668 Taurine catabolism dioxygenase TauD, TfdA family ACPL_2389 PF00296 Luciferase-like monooxygenase ACPL_2394 PF04055 Radical SAM superfamily ACPL_2398 PF08021 Siderophore-interacting FAD-binding domain ACPL_2398 PF04954 Siderophore-interacting protein ACPL_2399 PF00072 Response regulator receiver domain ACPL_2399 PF00486 Transcriptional regulatory protein, C terminal ACPL_2404 PF00120 Glutamine synthetase, catalytic domain ACPL_2404 PF03951 Glutamine synthetase, beta-Grasp domain ACPL_2405 PF00582 Universal stress protein family ACPL_2407 PF07498 Rho termination factor, N-terminal domain ACPL_2407 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ACPL_2407 PF07497 Rho termination factor, RNA-binding domain ACPL_241 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ACPL_241 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ACPL_2411 PF00485 Phosphoribulokinase / Uridine kinase family ACPL_2417 PF02909 Tetracyclin repressor-like, C-terminal domain ACPL_2417 PF00440 Bacterial regulatory proteins, tetR family ACPL_2418 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACPL_2418 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACPL_2418 PF02770 Acyl-CoA dehydrogenase, middle domain ACPL_2420 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACPL_2420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACPL_2420 PF02770 Acyl-CoA dehydrogenase, middle domain ACPL_2421 PF09594 Glycosyltransferase family 87 ACPL_2423 PF13411 MerR HTH family regulatory protein ACPL_2427 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ACPL_2427 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACPL_2428 PF14310 Fibronectin type III-like domain ACPL_2428 PF07691 PA14 domain ACPL_2428 PF00933 Glycosyl hydrolase family 3 N terminal domain ACPL_2428 PF01915 Glycosyl hydrolase family 3 C-terminal domain ACPL_2429 PF00356 Bacterial regulatory proteins, lacI family ACPL_2431 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_2432 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_2433 PF01055 Glycosyl hydrolases family 31 ACPL_2433 PF13802 Galactose mutarotase-like ACPL_2437 PF09363 XFP C-terminal domain ACPL_2437 PF09364 XFP N-terminal domain ACPL_2437 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase ACPL_2439 PF00005 ABC transporter ACPL_2442 PF13190 PDGLE domain ACPL_2442 PF01891 Cobalt uptake substrate-specific transmembrane region ACPL_2443 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_2443 PF00672 HAMP domain ACPL_2443 PF00512 His Kinase A (phospho-acceptor) domain ACPL_2443 PF13426 PAS domain ACPL_2446 PF16591 Helical bimodular sensor domain ACPL_2446 PF00672 HAMP domain ACPL_2446 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACPL_2447 PF16736 Single Cache-like ACPL_2447 PF00512 His Kinase A (phospho-acceptor) domain ACPL_2447 PF00989 PAS fold ACPL_2447 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_2448 PF00072 Response regulator receiver domain ACPL_2448 PF02954 Bacterial regulatory protein, Fis family ACPL_2448 PF00158 Sigma-54 interaction domain ACPL_245 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family ACPL_2451 PF02653 Branched-chain amino acid transport system / permease component ACPL_2452 PF02653 Branched-chain amino acid transport system / permease component ACPL_2453 PF00005 ABC transporter ACPL_2454 PF13407 Periplasmic binding protein domain ACPL_2458 PF00459 Inositol monophosphatase family ACPL_2459 PF03793 PASTA domain ACPL_2459 PF00069 Protein kinase domain ACPL_2461 PF00155 Aminotransferase class I and II ACPL_2461 PF00392 Bacterial regulatory proteins, gntR family ACPL_2462 PF00171 Aldehyde dehydrogenase family ACPL_2463 PF00202 Aminotransferase class-III ACPL_2464 PF00171 Aldehyde dehydrogenase family ACPL_2465 PF08402 TOBE domain ACPL_2465 PF00005 ABC transporter ACPL_2466 PF13416 Bacterial extracellular solute-binding protein ACPL_2467 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_2468 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_2469 PF01266 FAD dependent oxidoreductase ACPL_2470 PF00202 Aminotransferase class-III ACPL_2471 PF09278 MerR, DNA binding ACPL_2471 PF00376 MerR family regulatory protein ACPL_2473 PF00072 Response regulator receiver domain ACPL_2473 PF00486 Transcriptional regulatory protein, C terminal ACPL_2474 PF00672 HAMP domain ACPL_2474 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_2474 PF00512 His Kinase A (phospho-acceptor) domain ACPL_2475 PF01266 FAD dependent oxidoreductase ACPL_2476 PF01037 Lrp/AsnC ligand binding domain ACPL_2477 PF00202 Aminotransferase class-III ACPL_2478 PF00171 Aldehyde dehydrogenase family ACPL_2479 PF07228 Stage II sporulation protein E (SpoIIE) ACPL_2479 PF13426 PAS domain ACPL_2480 PF00933 Glycosyl hydrolase family 3 N terminal domain ACPL_2480 PF14310 Fibronectin type III-like domain ACPL_2480 PF01915 Glycosyl hydrolase family 3 C-terminal domain ACPL_2481 PF01547 Bacterial extracellular solute-binding protein ACPL_2482 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_2483 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_2484 PF00356 Bacterial regulatory proteins, lacI family ACPL_2485 PF00296 Luciferase-like monooxygenase ACPL_2486 PF03781 Sulfatase-modifying factor enzyme 1 ACPL_2489 PF00672 HAMP domain ACPL_2489 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACPL_2489 PF16591 Helical bimodular sensor domain ACPL_249 PF03061 Thioesterase superfamily ACPL_2490 PF03576 Peptidase family S58 ACPL_2491 PF00296 Luciferase-like monooxygenase ACPL_2494 PF05368 NmrA-like family ACPL_2495 PF01638 HxlR-like helix-turn-helix ACPL_2498 PF13188 PAS domain ACPL_2498 PF00563 EAL domain ACPL_2498 PF00990 Diguanylate cyclase, GGDEF domain ACPL_2498 PF03707 Bacterial signalling protein N terminal repeat ACPL_2499 PF02515 CoA-transferase family III ACPL_2500 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ACPL_2500 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ACPL_2500 PF00378 Enoyl-CoA hydratase/isomerase ACPL_2501 PF02803 Thiolase, C-terminal domain ACPL_2501 PF00108 Thiolase, N-terminal domain ACPL_2502 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACPL_2502 PF02770 Acyl-CoA dehydrogenase, middle domain ACPL_2502 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACPL_2503 PF00440 Bacterial regulatory proteins, tetR family ACPL_2504 PF00296 Luciferase-like monooxygenase ACPL_2506 PF12705 PD-(D/E)XK nuclease superfamily ACPL_2506 PF00580 UvrD/REP helicase N-terminal domain ACPL_2506 PF13361 UvrD-like helicase C-terminal domain ACPL_2506 PF13361 UvrD-like helicase C-terminal domain ACPL_2506 PF12705 PD-(D/E)XK nuclease superfamily ACPL_2506 PF00580 UvrD/REP helicase N-terminal domain ACPL_2513 PF00196 Bacterial regulatory proteins, luxR family ACPL_2513 PF00072 Response regulator receiver domain ACPL_2515 PF07730 Histidine kinase ACPL_2516 PF00501 AMP-binding enzyme ACPL_2516 PF13193 AMP-binding enzyme C-terminal domain ACPL_2516 PF16177 Acetyl-coenzyme A synthetase N-terminus ACPL_2518 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ACPL_2519 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_2521 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ACPL_2521 PF00005 ABC transporter ACPL_2522 PF00296 Luciferase-like monooxygenase ACPL_2525 PF00296 Luciferase-like monooxygenase ACPL_2526 PF08240 Alcohol dehydrogenase GroES-like domain ACPL_2526 PF00107 Zinc-binding dehydrogenase ACPL_253 PF00293 NUDIX domain ACPL_2531 PF00248 Aldo/keto reductase family ACPL_2532 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACPL_2532 PF03466 LysR substrate binding domain ACPL_254 PF01593 Flavin containing amine oxidoreductase ACPL_2541 PF00005 ABC transporter ACPL_2543 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_2544 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ACPL_2545 PF00005 ABC transporter ACPL_2546 PF00563 EAL domain ACPL_2546 PF00990 Diguanylate cyclase, GGDEF domain ACPL_2546 PF03707 Bacterial signalling protein N terminal repeat ACPL_2547 PF00128 Alpha amylase, catalytic domain ACPL_2548 PF00356 Bacterial regulatory proteins, lacI family ACPL_2549 PF05532 CsbD-like ACPL_2550 PF00296 Luciferase-like monooxygenase ACPL_2551 PF03176 MMPL family ACPL_2555 PF00005 ABC transporter ACPL_2555 PF00664 ABC transporter transmembrane region ACPL_2556 PF08241 Methyltransferase domain ACPL_2557 PF00285 Citrate synthase, C-terminal domain ACPL_2558 PF00285 Citrate synthase, C-terminal domain ACPL_2561 PF00364 Biotin-requiring enzyme ACPL_2561 PF00561 alpha/beta hydrolase fold ACPL_2562 PF00106 short chain dehydrogenase ACPL_2563 PF00743 Flavin-binding monooxygenase-like ACPL_2569 PF04324 BFD-like [2Fe-2S] binding domain ACPL_2569 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACPL_2569 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ACPL_2569 PF18267 Rubredoxin NAD+ reductase C-terminal domain ACPL_2569 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ACPL_257 PF03441 FAD binding domain of DNA photolyase ACPL_257 PF00875 DNA photolyase ACPL_2570 PF00355 Rieske [2Fe-2S] domain ACPL_2571 PF07690 Major Facilitator Superfamily ACPL_2576 PF00005 ABC transporter ACPL_2577 PF00005 ABC transporter ACPL_2578 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_2579 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_258 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ACPL_258 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACPL_2580 PF01547 Bacterial extracellular solute-binding protein ACPL_2581 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ACPL_2581 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ACPL_2581 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ACPL_2582 PF03442 Carbohydrate binding domain X2 ACPL_2582 PF00942 Cellulose binding domain ACPL_2583 PF02011 Glycosyl hydrolase family 48 ACPL_2583 PF00041 Fibronectin type III domain ACPL_2583 PF00553 Cellulose binding domain ACPL_2584 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading ACPL_2584 PF00553 Cellulose binding domain ACPL_2586 PF01300 Telomere recombination ACPL_2587 PF00293 NUDIX domain ACPL_2588 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ACPL_2588 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ACPL_2596 PF03466 LysR substrate binding domain ACPL_2596 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACPL_2599 PF01313 Bacterial export proteins, family 3 ACPL_2600 PF04075 F420H(2)-dependent quinone reductase ACPL_2601 PF00296 Luciferase-like monooxygenase ACPL_2602 PF00067 Cytochrome P450 ACPL_2604 PF03707 Bacterial signalling protein N terminal repeat ACPL_2604 PF00990 Diguanylate cyclase, GGDEF domain ACPL_2604 PF00563 EAL domain ACPL_2606 PF00557 Metallopeptidase family M24 ACPL_2607 PF08241 Methyltransferase domain ACPL_261 PF00069 Protein kinase domain ACPL_2612 PF00152 tRNA synthetases class II (D, K and N) ACPL_2612 PF09924 Uncharacterised conserved protein (DUF2156) ACPL_2612 PF01336 OB-fold nucleic acid binding domain ACPL_2612 PF16995 Transmembrane region of lysyl-tRNA synthetase ACPL_2613 PF00293 NUDIX domain ACPL_2618 PF00583 Acetyltransferase (GNAT) family ACPL_262 PF08281 Sigma-70, region 4 ACPL_262 PF04542 Sigma-70 region 2 ACPL_2620 PF02694 Uncharacterised BCR, YnfA/UPF0060 family ACPL_2632 PF00296 Luciferase-like monooxygenase ACPL_2638 PF01594 AI-2E family transporter ACPL_264 PF01297 Zinc-uptake complex component A periplasmic ACPL_2640 PF16485 Protealysin propeptide ACPL_2640 PF02868 Thermolysin metallopeptidase, alpha-helical domain ACPL_2640 PF01447 Thermolysin metallopeptidase, catalytic domain ACPL_2647 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ACPL_2648 PF00106 short chain dehydrogenase ACPL_2649 PF01467 Cytidylyltransferase-like ACPL_2649 PF00294 pfkB family carbohydrate kinase ACPL_265 PF00005 ABC transporter ACPL_2650 PF13439 Glycosyltransferase Family 4 ACPL_2650 PF00534 Glycosyl transferases group 1 ACPL_2654 PF16861 Carbamoyltransferase C-terminus ACPL_2654 PF02543 Carbamoyltransferase N-terminus ACPL_2655 PF00171 Aldehyde dehydrogenase family ACPL_2658 PF04542 Sigma-70 region 2 ACPL_2658 PF04539 Sigma-70 region 3 ACPL_2658 PF04545 Sigma-70, region 4 ACPL_266 PF00950 ABC 3 transport family ACPL_2663 PF00296 Luciferase-like monooxygenase ACPL_2667 PF13340 Putative transposase of IS4/5 family (DUF4096) ACPL_2668 PF00665 Integrase core domain ACPL_2672 PF02696 Uncharacterized ACR, YdiU/UPF0061 family ACPL_2674 PF13538 UvrD-like helicase C-terminal domain ACPL_2675 PF04616 Glycosyl hydrolases family 43 ACPL_2676 PF02627 Carboxymuconolactone decarboxylase family ACPL_2677 PF04226 Transglycosylase associated protein ACPL_268 PF01022 Bacterial regulatory protein, arsR family ACPL_2680 PF03069 Acetamidase/Formamidase family ACPL_2681 PF13520 Amino acid permease ACPL_2684 PF00990 Diguanylate cyclase, GGDEF domain ACPL_2684 PF00563 EAL domain ACPL_2684 PF03707 Bacterial signalling protein N terminal repeat ACPL_2689 PF17863 AAA lid domain ACPL_2689 PF07726 ATPase family associated with various cellular activities (AAA) ACPL_269 PF03773 Predicted permease ACPL_2694 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ACPL_2694 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ACPL_2694 PF00205 Thiamine pyrophosphate enzyme, central domain ACPL_2699 PF00210 Ferritin-like domain ACPL_2701 PF00544 Pectate lyase ACPL_2703 PF01327 Polypeptide deformylase ACPL_2710 PF00115 Cytochrome C and Quinol oxidase polypeptide I ACPL_2713 PF00155 Aminotransferase class I and II ACPL_2718 PF13823 Alcohol dehydrogenase GroES-associated ACPL_2718 PF00107 Zinc-binding dehydrogenase ACPL_2718 PF08240 Alcohol dehydrogenase GroES-like domain ACPL_2719 PF00990 Diguanylate cyclase, GGDEF domain ACPL_2719 PF13188 PAS domain ACPL_2719 PF03707 Bacterial signalling protein N terminal repeat ACPL_2719 PF00563 EAL domain ACPL_2720 PF04539 Sigma-70 region 3 ACPL_2720 PF04542 Sigma-70 region 2 ACPL_2720 PF04545 Sigma-70, region 4 ACPL_2722 PF01139 tRNA-splicing ligase RtcB ACPL_2725 PF03773 Predicted permease ACPL_2726 PF03705 CheR methyltransferase, all-alpha domain ACPL_2726 PF08448 PAS fold ACPL_2726 PF01739 CheR methyltransferase, SAM binding domain ACPL_2726 PF01339 CheB methylesterase ACPL_2727 PF00072 Response regulator receiver domain ACPL_2727 PF01339 CheB methylesterase ACPL_2730 PF01339 CheB methylesterase ACPL_2730 PF00072 Response regulator receiver domain ACPL_2733 PF00440 Bacterial regulatory proteins, tetR family ACPL_2733 PF16859 Tetracyclin repressor-like, C-terminal domain ACPL_2735 PF00083 Sugar (and other) transporter ACPL_2736 PF02682 Carboxyltransferase domain, subdomain C and D ACPL_2737 PF02626 Carboxyltransferase domain, subdomain A and B ACPL_2743 PF01965 DJ-1/PfpI family ACPL_2743 PF12833 Helix-turn-helix domain ACPL_2745 PF00561 alpha/beta hydrolase fold ACPL_2748 PF00005 ABC transporter ACPL_2748 PF12399 Branched-chain amino acid ATP-binding cassette transporter ACPL_2749 PF00005 ABC transporter ACPL_2750 PF02653 Branched-chain amino acid transport system / permease component ACPL_2752 PF00296 Luciferase-like monooxygenase ACPL_2753 PF01144 Coenzyme A transferase ACPL_2754 PF01144 Coenzyme A transferase ACPL_2755 PF00108 Thiolase, N-terminal domain ACPL_2755 PF02803 Thiolase, C-terminal domain ACPL_2756 PF03466 LysR substrate binding domain ACPL_2756 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACPL_2757 PF00775 Dioxygenase ACPL_2757 PF04444 Catechol dioxygenase N terminus ACPL_2758 PF00005 ABC transporter ACPL_2758 PF16326 ABC transporter C-terminal domain ACPL_2758 PF12848 ABC transporter ACPL_2759 PF00011 Hsp20/alpha crystallin family ACPL_2760 PF14031 Putative serine dehydratase domain ACPL_2763 PF01965 DJ-1/PfpI family ACPL_2764 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACPL_2764 PF00672 HAMP domain ACPL_2771 PF03707 Bacterial signalling protein N terminal repeat ACPL_2771 PF00990 Diguanylate cyclase, GGDEF domain ACPL_2771 PF00563 EAL domain ACPL_2773 PF00512 His Kinase A (phospho-acceptor) domain ACPL_2773 PF13188 PAS domain ACPL_2773 PF00072 Response regulator receiver domain ACPL_2773 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_2773 PF08448 PAS fold ACPL_2775 PF00111 2Fe-2S iron-sulfur cluster binding domain ACPL_2775 PF10518 TAT (twin-arginine translocation) pathway signal sequence ACPL_2775 PF01799 [2Fe-2S] binding domain ACPL_2776 PF03450 CO dehydrogenase flavoprotein C-terminal domain ACPL_2776 PF00941 FAD binding domain in molybdopterin dehydrogenase ACPL_2777 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ACPL_2777 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ACPL_2779 PF13407 Periplasmic binding protein domain ACPL_2780 PF02653 Branched-chain amino acid transport system / permease component ACPL_2781 PF00005 ABC transporter ACPL_2782 PF00480 ROK family ACPL_2782 PF01047 MarR family ACPL_2783 PF12704 MacB-like periplasmic core domain ACPL_2783 PF02687 FtsX-like permease family ACPL_2783 PF00005 ABC transporter ACPL_2784 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACPL_2784 PF00672 HAMP domain ACPL_2784 PF12729 Four helix bundle sensory module for signal transduction ACPL_2785 PF00296 Luciferase-like monooxygenase ACPL_2786 PF00881 Nitroreductase family ACPL_279 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ACPL_279 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ACPL_2796 PF13397 RNA polymerase-binding protein ACPL_2798 PF00535 Glycosyl transferase family 2 ACPL_2799 PF00535 Glycosyl transferase family 2 ACPL_2799 PF00795 Carbon-nitrogen hydrolase ACPL_2800 PF13941 MutL protein ACPL_2801 PF03061 Thioesterase superfamily ACPL_2802 PF02310 B12 binding domain ACPL_2802 PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase ACPL_2803 PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit ACPL_2804 PF07969 Amidohydrolase family ACPL_2808 PF08241 Methyltransferase domain ACPL_2813 PF01037 Lrp/AsnC ligand binding domain ACPL_2814 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACPL_2814 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACPL_2814 PF02770 Acyl-CoA dehydrogenase, middle domain ACPL_2815 PF01367 5'-3' exonuclease, C-terminal SAM fold ACPL_2815 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ACPL_2821 PF07690 Major Facilitator Superfamily ACPL_2822 PF04185 Phosphoesterase family ACPL_2823 PF00990 Diguanylate cyclase, GGDEF domain ACPL_2823 PF03707 Bacterial signalling protein N terminal repeat ACPL_2823 PF13188 PAS domain ACPL_2823 PF00563 EAL domain ACPL_2825 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACPL_2825 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ACPL_2826 PF17158 Membrane-associated sensor, integral membrane domain ACPL_2826 PF00990 Diguanylate cyclase, GGDEF domain ACPL_2827 PF00722 Glycosyl hydrolases family 16 ACPL_283 PF00589 Phage integrase family ACPL_283 PF02899 Phage integrase, N-terminal SAM-like domain ACPL_2830 PF16655 PhoD-like phosphatase, N-terminal domain ACPL_2830 PF09423 PhoD-like phosphatase ACPL_2832 PF03091 CutA1 divalent ion tolerance protein ACPL_2834 PF13419 Haloacid dehalogenase-like hydrolase ACPL_2845 PF00128 Alpha amylase, catalytic domain ACPL_2845 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ACPL_2846 PF07690 Major Facilitator Superfamily ACPL_2848 PF00248 Aldo/keto reductase family ACPL_2850 PF05139 Erythromycin esterase ACPL_2850 PF00156 Phosphoribosyl transferase domain ACPL_2853 PF06480 FtsH Extracellular ACPL_2853 PF01434 Peptidase family M41 ACPL_2853 PF00004 ATPase family associated with various cellular activities (AAA) ACPL_2853 PF17862 AAA+ lid domain ACPL_2858 PF13732 Domain of unknown function (DUF4162) ACPL_2858 PF00005 ABC transporter ACPL_2860 PF00196 Bacterial regulatory proteins, luxR family ACPL_2861 PF00293 NUDIX domain ACPL_2863 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ACPL_2863 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ACPL_2867 PF00497 Bacterial extracellular solute-binding proteins, family 3 ACPL_2869 PF03707 Bacterial signalling protein N terminal repeat ACPL_2869 PF00563 EAL domain ACPL_2869 PF00990 Diguanylate cyclase, GGDEF domain ACPL_2870 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ACPL_2870 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ACPL_2870 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ACPL_2870 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ACPL_2874 PF01381 Helix-turn-helix ACPL_2876 PF03883 Peroxide stress protein YaaA ACPL_2879 PF03176 MMPL family ACPL_2880 PF00106 short chain dehydrogenase ACPL_2882 PF04434 SWIM zinc finger ACPL_2883 PF00271 Helicase conserved C-terminal domain ACPL_2883 PF12419 SNF2 Helicase protein ACPL_2883 PF00176 SNF2 family N-terminal domain ACPL_2885 PF03707 Bacterial signalling protein N terminal repeat ACPL_2885 PF13188 PAS domain ACPL_2885 PF00990 Diguanylate cyclase, GGDEF domain ACPL_2885 PF00563 EAL domain ACPL_2889 PF01820 D-ala D-ala ligase N-terminus ACPL_2889 PF07478 D-ala D-ala ligase C-terminus ACPL_2890 PF02018 Carbohydrate binding domain ACPL_2890 PF00759 Glycosyl hydrolase family 9 ACPL_2890 PF02927 Cellulase N-terminal ig-like domain ACPL_2891 PF00067 Cytochrome P450 ACPL_2894 PF13520 Amino acid permease ACPL_2895 PF00069 Protein kinase domain ACPL_2901 PF00149 Calcineurin-like phosphoesterase ACPL_2902 PF00664 ABC transporter transmembrane region ACPL_2902 PF00005 ABC transporter ACPL_2903 PF00595 PDZ domain ACPL_2906 PF01209 ubiE/COQ5 methyltransferase family ACPL_2907 PF00111 2Fe-2S iron-sulfur cluster binding domain ACPL_2907 PF00175 Oxidoreductase NAD-binding domain ACPL_2907 PF00970 Oxidoreductase FAD-binding domain ACPL_2908 PF01883 Iron-sulfur cluster assembly protein ACPL_2909 PF05138 Phenylacetic acid catabolic protein ACPL_2910 PF06243 Phenylacetic acid degradation B ACPL_2911 PF05138 Phenylacetic acid catabolic protein ACPL_2914 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ACPL_2914 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ACPL_2915 PF00005 ABC transporter ACPL_2916 PF02653 Branched-chain amino acid transport system / permease component ACPL_2918 PF01261 Xylose isomerase-like TIM barrel ACPL_2919 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ACPL_2919 PF00205 Thiamine pyrophosphate enzyme, central domain ACPL_2919 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ACPL_2920 PF04962 KduI/IolB family ACPL_2921 PF00294 pfkB family carbohydrate kinase ACPL_2923 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ACPL_2924 PF03741 Integral membrane protein TerC family ACPL_2926 PF00196 Bacterial regulatory proteins, luxR family ACPL_2926 PF00072 Response regulator receiver domain ACPL_2928 PF02687 FtsX-like permease family ACPL_2928 PF12704 MacB-like periplasmic core domain ACPL_2928 PF00005 ABC transporter ACPL_2929 PF02687 FtsX-like permease family ACPL_2929 PF12704 MacB-like periplasmic core domain ACPL_2929 PF00005 ABC transporter ACPL_2931 PF00672 HAMP domain ACPL_2931 PF00512 His Kinase A (phospho-acceptor) domain ACPL_2931 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_2932 PF00072 Response regulator receiver domain ACPL_2932 PF00486 Transcriptional regulatory protein, C terminal ACPL_2935 PF01738 Dienelactone hydrolase family ACPL_2936 PF00072 Response regulator receiver domain ACPL_2936 PF00196 Bacterial regulatory proteins, luxR family ACPL_2939 PF00300 Histidine phosphatase superfamily (branch 1) ACPL_2940 PF14310 Fibronectin type III-like domain ACPL_2940 PF00933 Glycosyl hydrolase family 3 N terminal domain ACPL_2940 PF01915 Glycosyl hydrolase family 3 C-terminal domain ACPL_2940 PF07691 PA14 domain ACPL_2941 PF00356 Bacterial regulatory proteins, lacI family ACPL_2946 PF00480 ROK family ACPL_2951 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ACPL_2951 PF00005 ABC transporter ACPL_2952 PF00005 ABC transporter ACPL_2952 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ACPL_2953 PF12911 N-terminal TM domain of oligopeptide transport permease C ACPL_2953 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_2954 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_2958 PF00486 Transcriptional regulatory protein, C terminal ACPL_2958 PF00072 Response regulator receiver domain ACPL_2959 PF06745 KaiC ACPL_2962 PF00356 Bacterial regulatory proteins, lacI family ACPL_2965 PF00893 Small Multidrug Resistance protein ACPL_2967 PF08359 YsiA-like protein, C-terminal region ACPL_2967 PF00440 Bacterial regulatory proteins, tetR family ACPL_2972 PF03358 NADPH-dependent FMN reductase ACPL_2974 PF00069 Protein kinase domain ACPL_2976 PF00041 Fibronectin type III domain ACPL_2976 PF00704 Glycosyl hydrolases family 18 ACPL_2978 PF00342 Phosphoglucose isomerase ACPL_2979 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase ACPL_2982 PF11606 Family 31 carbohydrate binding protein ACPL_2991 PF00872 Transposase, Mutator family ACPL_2993 PF01979 Amidohydrolase family ACPL_2994 PF02652 L-lactate permease ACPL_2995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_2995 PF11808 Phosphate regulon sensor protein PhoR ACPL_2995 PF00512 His Kinase A (phospho-acceptor) domain ACPL_2995 PF00989 PAS fold ACPL_2998 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase ACPL_2998 PF13088 BNR repeat-like domain ACPL_2998 PF00754 F5/8 type C domain ACPL_3003 PF00652 Ricin-type beta-trefoil lectin domain ACPL_3003 PF03664 Glycosyl hydrolase family 62 ACPL_3005 PF03664 Glycosyl hydrolase family 62 ACPL_3005 PF00652 Ricin-type beta-trefoil lectin domain ACPL_3008 PF04616 Glycosyl hydrolases family 43 ACPL_3008 PF03422 Carbohydrate binding module (family 6) ACPL_3009 PF16499 Alpha galactosidase A ACPL_3009 PF17801 Alpha galactosidase C-terminal beta sandwich domain ACPL_301 PF02659 Putative manganese efflux pump ACPL_3010 PF00331 Glycosyl hydrolase family 10 ACPL_3010 PF00652 Ricin-type beta-trefoil lectin domain ACPL_3011 PF00553 Cellulose binding domain ACPL_3011 PF01341 Glycosyl hydrolases family 6 ACPL_3012 PF00041 Fibronectin type III domain ACPL_3012 PF00553 Cellulose binding domain ACPL_3012 PF01341 Glycosyl hydrolases family 6 ACPL_3013 PF13419 Haloacid dehalogenase-like hydrolase ACPL_3014 PF00331 Glycosyl hydrolase family 10 ACPL_3014 PF00652 Ricin-type beta-trefoil lectin domain ACPL_3018 PF00672 HAMP domain ACPL_3018 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_3018 PF00512 His Kinase A (phospho-acceptor) domain ACPL_3019 PF00072 Response regulator receiver domain ACPL_3019 PF00486 Transcriptional regulatory protein, C terminal ACPL_3021 PF00291 Pyridoxal-phosphate dependent enzyme ACPL_3022 PF00290 Tryptophan synthase alpha chain ACPL_3028 PF17862 AAA+ lid domain ACPL_3028 PF01434 Peptidase family M41 ACPL_3028 PF00004 ATPase family associated with various cellular activities (AAA) ACPL_3028 PF06480 FtsH Extracellular ACPL_3029 PF00877 NlpC/P60 family ACPL_3030 PF01435 Peptidase family M48 ACPL_3031 PF03965 Penicillinase repressor ACPL_3032 PF01654 Cytochrome bd terminal oxidase subunit I ACPL_3033 PF02322 Cytochrome bd terminal oxidase subunit II ACPL_3034 PF00664 ABC transporter transmembrane region ACPL_3034 PF00005 ABC transporter ACPL_3036 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACPL_3036 PF00672 HAMP domain ACPL_3036 PF02743 Cache domain ACPL_3037 PF00809 Pterin binding enzyme ACPL_3038 PF07690 Major Facilitator Superfamily ACPL_3041 PF01726 LexA DNA binding domain ACPL_3041 PF00717 Peptidase S24-like ACPL_3045 PF02447 GntP family permease ACPL_3047 PF02525 Flavodoxin-like fold ACPL_3048 PF00106 short chain dehydrogenase ACPL_3048 PF00561 alpha/beta hydrolase fold ACPL_3050 PF00440 Bacterial regulatory proteins, tetR family ACPL_3050 PF17754 MftR C-terminal domain ACPL_3051 PF07690 Major Facilitator Superfamily ACPL_3056 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_3056 PF00183 Hsp90 protein ACPL_306 PF00989 PAS fold ACPL_306 PF00512 His Kinase A (phospho-acceptor) domain ACPL_306 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_306 PF00672 HAMP domain ACPL_3060 PF00561 alpha/beta hydrolase fold ACPL_3062 PF01497 Periplasmic binding protein ACPL_3066 PF00534 Glycosyl transferases group 1 ACPL_3066 PF13439 Glycosyltransferase Family 4 ACPL_3070 PF00925 GTP cyclohydrolase II ACPL_3072 PF09382 RQC domain ACPL_3072 PF00570 HRDC domain ACPL_3072 PF16124 RecQ zinc-binding ACPL_3072 PF00270 DEAD/DEAH box helicase ACPL_3072 PF00271 Helicase conserved C-terminal domain ACPL_3075 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ACPL_3075 PF02896 PEP-utilising enzyme, TIM barrel domain ACPL_3075 PF00391 PEP-utilising enzyme, mobile domain ACPL_3077 PF01565 FAD binding domain ACPL_3077 PF02913 FAD linked oxidases, C-terminal domain ACPL_3078 PF02913 FAD linked oxidases, C-terminal domain ACPL_3078 PF01565 FAD binding domain ACPL_3079 PF02754 Cysteine-rich domain ACPL_3079 PF13183 4Fe-4S dicluster domain ACPL_3080 PF03176 MMPL family ACPL_3082 PF01668 SmpB protein ACPL_3083 PF13407 Periplasmic binding protein domain ACPL_3084 PF00171 Aldehyde dehydrogenase family ACPL_3088 PF13407 Periplasmic binding protein domain ACPL_3091 PF03793 PASTA domain ACPL_3091 PF00069 Protein kinase domain ACPL_3095 PF04321 RmlD substrate binding domain ACPL_3096 PF16363 GDP-mannose 4,6 dehydratase ACPL_3097 PF00483 Nucleotidyl transferase ACPL_3098 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase ACPL_3099 PF02397 Bacterial sugar transferase ACPL_3100 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ACPL_3100 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ACPL_3100 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ACPL_3104 PF01037 Lrp/AsnC ligand binding domain ACPL_311 PF00440 Bacterial regulatory proteins, tetR family ACPL_311 PF08360 QacR-like protein, C-terminal region ACPL_3118 PF07993 Male sterility protein ACPL_3118 PF00550 Phosphopantetheine attachment site ACPL_3118 PF00668 Condensation domain ACPL_3118 PF00501 AMP-binding enzyme ACPL_3118 PF13193 AMP-binding enzyme C-terminal domain ACPL_3119 PF00975 Thioesterase domain ACPL_3119 PF00550 Phosphopantetheine attachment site ACPL_3119 PF00668 Condensation domain ACPL_3119 PF00501 AMP-binding enzyme ACPL_3119 PF13193 AMP-binding enzyme C-terminal domain ACPL_312 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ACPL_3120 PF03621 MbtH-like protein ACPL_3122 PF02817 e3 binding domain ACPL_3122 PF00364 Biotin-requiring enzyme ACPL_3122 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ACPL_3123 PF02780 Transketolase, C-terminal domain ACPL_3123 PF02779 Transketolase, pyrimidine binding domain ACPL_3124 PF00676 Dehydrogenase E1 component ACPL_3125 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ACPL_3130 PF00132 Bacterial transferase hexapeptide (six repeats) ACPL_3131 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ACPL_3131 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ACPL_3132 PF01370 NAD dependent epimerase/dehydratase family ACPL_3133 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ACPL_3134 PF12833 Helix-turn-helix domain ACPL_3134 PF01965 DJ-1/PfpI family ACPL_3135 PF01209 ubiE/COQ5 methyltransferase family ACPL_3138 PF01653 NAD-dependent DNA ligase adenylation domain ACPL_3138 PF00533 BRCA1 C Terminus (BRCT) domain ACPL_3138 PF03120 NAD-dependent DNA ligase OB-fold domain ACPL_3138 PF12826 Helix-hairpin-helix motif ACPL_3139 PF06628 Catalase-related immune-responsive ACPL_3139 PF18011 C-terminal domain found in long catalases ACPL_3139 PF00199 Catalase ACPL_3141 PF00583 Acetyltransferase (GNAT) family ACPL_3142 PF01565 FAD binding domain ACPL_3142 PF02913 FAD linked oxidases, C-terminal domain ACPL_3142 PF13183 4Fe-4S dicluster domain ACPL_3144 PF00931 NB-ARC domain ACPL_3144 PF03704 Bacterial transcriptional activator domain ACPL_3144 PF00486 Transcriptional regulatory protein, C terminal ACPL_3147 PF08546 Ketopantoate reductase PanE/ApbA C terminal ACPL_3147 PF02558 Ketopantoate reductase PanE/ApbA ACPL_3148 PF00141 Peroxidase ACPL_315 PF00563 EAL domain ACPL_315 PF03707 Bacterial signalling protein N terminal repeat ACPL_315 PF00990 Diguanylate cyclase, GGDEF domain ACPL_3156 PF01039 Carboxyl transferase domain ACPL_3157 PF00364 Biotin-requiring enzyme ACPL_3157 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ACPL_3157 PF00289 Biotin carboxylase, N-terminal domain ACPL_3157 PF02785 Biotin carboxylase C-terminal domain ACPL_3158 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACPL_3158 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACPL_3158 PF02770 Acyl-CoA dehydrogenase, middle domain ACPL_3159 PF01095 Pectinesterase ACPL_3160 PF01436 NHL repeat ACPL_3160 PF00069 Protein kinase domain ACPL_3160 PF08450 SMP-30/Gluconolactonase/LRE-like region ACPL_3162 PF00067 Cytochrome P450 ACPL_3164 PF14759 Reductase C-terminal ACPL_3164 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACPL_3169 PF13546 DDE superfamily endonuclease ACPL_3173 PF07690 Major Facilitator Superfamily ACPL_3181 PF00561 alpha/beta hydrolase fold ACPL_3181 PF00364 Biotin-requiring enzyme ACPL_3185 PF07730 Histidine kinase ACPL_3186 PF00196 Bacterial regulatory proteins, luxR family ACPL_3186 PF00072 Response regulator receiver domain ACPL_3195 PF01380 SIS domain ACPL_3196 PF01418 Helix-turn-helix domain, rpiR family ACPL_3196 PF01380 SIS domain ACPL_3197 PF07075 Protein of unknown function (DUF1343) ACPL_3198 PF00144 Beta-lactamase ACPL_3200 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_3201 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_3205 PF01047 MarR family ACPL_3207 PF00512 His Kinase A (phospho-acceptor) domain ACPL_3207 PF00672 HAMP domain ACPL_3207 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_3208 PF00072 Response regulator receiver domain ACPL_3208 PF00486 Transcriptional regulatory protein, C terminal ACPL_3210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACPL_3210 PF03466 LysR substrate binding domain ACPL_3213 PF01370 NAD dependent epimerase/dehydratase family ACPL_3214 PF00005 ABC transporter ACPL_3219 PF01593 Flavin containing amine oxidoreductase ACPL_3221 PF13519 von Willebrand factor type A domain ACPL_3223 PF00072 Response regulator receiver domain ACPL_3223 PF00196 Bacterial regulatory proteins, luxR family ACPL_3225 PF00144 Beta-lactamase ACPL_3226 PF02515 CoA-transferase family III ACPL_3227 PF01370 NAD dependent epimerase/dehydratase family ACPL_3228 PF13439 Glycosyltransferase Family 4 ACPL_3231 PF00534 Glycosyl transferases group 1 ACPL_3231 PF13439 Glycosyltransferase Family 4 ACPL_3239 PF00990 Diguanylate cyclase, GGDEF domain ACPL_3239 PF10442 FIST C domain ACPL_3239 PF08495 FIST N domain ACPL_3239 PF00563 EAL domain ACPL_324 PF00005 ABC transporter ACPL_3243 PF01144 Coenzyme A transferase ACPL_3244 PF01144 Coenzyme A transferase ACPL_3245 PF00722 Glycosyl hydrolases family 16 ACPL_3251 PF00553 Cellulose binding domain ACPL_3251 PF01341 Glycosyl hydrolases family 6 ACPL_3257 PF03358 NADPH-dependent FMN reductase ACPL_3258 PF03795 YCII-related domain ACPL_3259 PF04542 Sigma-70 region 2 ACPL_3259 PF08281 Sigma-70, region 4 ACPL_326 PF01569 PAP2 superfamily ACPL_3262 PF03707 Bacterial signalling protein N terminal repeat ACPL_3262 PF00563 EAL domain ACPL_3262 PF00990 Diguanylate cyclase, GGDEF domain ACPL_3265 PF01699 Sodium/calcium exchanger protein ACPL_3267 PF01494 FAD binding domain ACPL_3268 PF16995 Transmembrane region of lysyl-tRNA synthetase ACPL_3268 PF01336 OB-fold nucleic acid binding domain ACPL_3268 PF09924 Uncharacterised conserved protein (DUF2156) ACPL_3268 PF00152 tRNA synthetases class II (D, K and N) ACPL_327 PF00486 Transcriptional regulatory protein, C terminal ACPL_327 PF00072 Response regulator receiver domain ACPL_3272 PF00072 Response regulator receiver domain ACPL_3272 PF00486 Transcriptional regulatory protein, C terminal ACPL_3273 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_3273 PF00512 His Kinase A (phospho-acceptor) domain ACPL_3273 PF00672 HAMP domain ACPL_3274 PF00248 Aldo/keto reductase family ACPL_328 PF00672 HAMP domain ACPL_328 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_328 PF00512 His Kinase A (phospho-acceptor) domain ACPL_3282 PF00005 ABC transporter ACPL_3283 PF03551 Transcriptional regulator PadR-like family ACPL_3283 PF13847 Methyltransferase domain ACPL_3286 PF02673 Bacitracin resistance protein BacA ACPL_3288 PF00563 EAL domain ACPL_3293 PF08543 Phosphomethylpyrimidine kinase ACPL_3294 PF09335 SNARE associated Golgi protein ACPL_330 PF03551 Transcriptional regulator PadR-like family ACPL_330 PF13847 Methyltransferase domain ACPL_3300 PF04389 Peptidase family M28 ACPL_3300 PF01483 Proprotein convertase P-domain ACPL_3304 PF00990 Diguanylate cyclase, GGDEF domain ACPL_3304 PF00563 EAL domain ACPL_3304 PF03707 Bacterial signalling protein N terminal repeat ACPL_3306 PF00293 NUDIX domain ACPL_3308 PF00069 Protein kinase domain ACPL_3308 PF00400 WD domain, G-beta repeat ACPL_3311 PF01336 OB-fold nucleic acid binding domain ACPL_3311 PF09924 Uncharacterised conserved protein (DUF2156) ACPL_3311 PF16995 Transmembrane region of lysyl-tRNA synthetase ACPL_3311 PF00152 tRNA synthetases class II (D, K and N) ACPL_3316 PF13472 GDSL-like Lipase/Acylhydrolase family ACPL_332 PF00877 NlpC/P60 family ACPL_3326 PF12833 Helix-turn-helix domain ACPL_3326 PF14525 AraC-binding-like domain ACPL_3327 PF01339 CheB methylesterase ACPL_3327 PF00072 Response regulator receiver domain ACPL_3328 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_3328 PF00512 His Kinase A (phospho-acceptor) domain ACPL_3328 PF00672 HAMP domain ACPL_3329 PF00072 Response regulator receiver domain ACPL_3329 PF00486 Transcriptional regulatory protein, C terminal ACPL_333 PF01464 Transglycosylase SLT domain ACPL_333 PF01551 Peptidase family M23 ACPL_333 PF10145 Phage-related minor tail protein ACPL_3330 PF11838 ERAP1-like C-terminal domain ACPL_3330 PF01433 Peptidase family M1 domain ACPL_3337 PF00239 Resolvase, N terminal domain ACPL_3337 PF02796 Helix-turn-helix domain of resolvase ACPL_3339 PF07730 Histidine kinase ACPL_3339 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_334 PF00364 Biotin-requiring enzyme ACPL_334 PF00561 alpha/beta hydrolase fold ACPL_3342 PF07690 Major Facilitator Superfamily ACPL_335 PF07690 Major Facilitator Superfamily ACPL_3351 PF00011 Hsp20/alpha crystallin family ACPL_336 PF00291 Pyridoxal-phosphate dependent enzyme ACPL_3361 PF04072 Leucine carboxyl methyltransferase ACPL_3362 PF00989 PAS fold ACPL_3362 PF00512 His Kinase A (phospho-acceptor) domain ACPL_3362 PF18698 Histidine kinase sensor domain ACPL_3362 PF00672 HAMP domain ACPL_3362 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_3364 PF13340 Putative transposase of IS4/5 family (DUF4096) ACPL_3365 PF00501 AMP-binding enzyme ACPL_3365 PF08241 Methyltransferase domain ACPL_3365 PF00668 Condensation domain ACPL_3365 PF00391 PEP-utilising enzyme, mobile domain ACPL_3365 PF00550 Phosphopantetheine attachment site ACPL_3365 PF00975 Thioesterase domain ACPL_3365 PF13193 AMP-binding enzyme C-terminal domain ACPL_3366 PF01433 Peptidase family M1 domain ACPL_3366 PF11838 ERAP1-like C-terminal domain ACPL_3374 PF00563 EAL domain ACPL_3374 PF08448 PAS fold ACPL_3374 PF13426 PAS domain ACPL_3374 PF08447 PAS fold ACPL_3374 PF05231 MASE1 ACPL_3374 PF00990 Diguanylate cyclase, GGDEF domain ACPL_3376 PF00672 HAMP domain ACPL_3376 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_3376 PF00072 Response regulator receiver domain ACPL_3376 PF01627 Hpt domain ACPL_3376 PF00512 His Kinase A (phospho-acceptor) domain ACPL_3376 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ACPL_3377 PF00563 EAL domain ACPL_3377 PF13188 PAS domain ACPL_3377 PF03707 Bacterial signalling protein N terminal repeat ACPL_3377 PF00990 Diguanylate cyclase, GGDEF domain ACPL_3378 PF00072 Response regulator receiver domain ACPL_3378 PF13188 PAS domain ACPL_3378 PF00512 His Kinase A (phospho-acceptor) domain ACPL_3378 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_3378 PF08448 PAS fold ACPL_3379 PF00072 Response regulator receiver domain ACPL_3383 PF04185 Phosphoesterase family ACPL_3389 PF02540 NAD synthase ACPL_3391 PF09277 Erythronolide synthase, docking ACPL_3391 PF00109 Beta-ketoacyl synthase, N-terminal domain ACPL_3391 PF02801 Beta-ketoacyl synthase, C-terminal domain ACPL_3391 PF08990 Erythronolide synthase docking ACPL_3391 PF08240 Alcohol dehydrogenase GroES-like domain ACPL_3391 PF08659 KR domain ACPL_3391 PF00698 Acyl transferase domain ACPL_3391 PF14765 Polyketide synthase dehydratase ACPL_3391 PF16197 Ketoacyl-synthetase C-terminal extension ACPL_3391 PF00550 Phosphopantetheine attachment site ACPL_3395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_3395 PF00072 Response regulator receiver domain ACPL_3395 PF13426 PAS domain ACPL_3397 PF00072 Response regulator receiver domain ACPL_3397 PF00990 Diguanylate cyclase, GGDEF domain ACPL_3398 PF00563 EAL domain ACPL_3398 PF00990 Diguanylate cyclase, GGDEF domain ACPL_3398 PF03707 Bacterial signalling protein N terminal repeat ACPL_340 PF02899 Phage integrase, N-terminal SAM-like domain ACPL_340 PF00589 Phage integrase family ACPL_3408 PF08281 Sigma-70, region 4 ACPL_3408 PF04542 Sigma-70 region 2 ACPL_3409 PF00990 Diguanylate cyclase, GGDEF domain ACPL_3409 PF08448 PAS fold ACPL_3410 PF14032 PknH-like extracellular domain ACPL_3410 PF00069 Protein kinase domain ACPL_3413 PF01471 Putative peptidoglycan binding domain ACPL_3413 PF08924 Domain of unknown function (DUF1906) ACPL_3415 PF08448 PAS fold ACPL_3415 PF08447 PAS fold ACPL_3415 PF00563 EAL domain ACPL_3415 PF00990 Diguanylate cyclase, GGDEF domain ACPL_3417 PF00982 Glycosyltransferase family 20 ACPL_3421 PF08448 PAS fold ACPL_3421 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_3421 PF13188 PAS domain ACPL_3421 PF00072 Response regulator receiver domain ACPL_3421 PF00512 His Kinase A (phospho-acceptor) domain ACPL_3423 PF00012 Hsp70 protein ACPL_3425 PF00486 Transcriptional regulatory protein, C terminal ACPL_3425 PF00072 Response regulator receiver domain ACPL_3427 PF18698 Histidine kinase sensor domain ACPL_3427 PF00672 HAMP domain ACPL_3427 PF00989 PAS fold ACPL_3427 PF00512 His Kinase A (phospho-acceptor) domain ACPL_3427 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_3428 PF00990 Diguanylate cyclase, GGDEF domain ACPL_3429 PF00072 Response regulator receiver domain ACPL_3430 PF00486 Transcriptional regulatory protein, C terminal ACPL_3430 PF00072 Response regulator receiver domain ACPL_3441 PF00990 Diguanylate cyclase, GGDEF domain ACPL_3441 PF08448 PAS fold ACPL_3442 PF00072 Response regulator receiver domain ACPL_3442 PF00990 Diguanylate cyclase, GGDEF domain ACPL_3447 PF00535 Glycosyl transferase family 2 ACPL_3448 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_3448 PF00512 His Kinase A (phospho-acceptor) domain ACPL_3448 PF16736 Single Cache-like ACPL_3448 PF00989 PAS fold ACPL_3449 PF00106 short chain dehydrogenase ACPL_3451 PF01740 STAS domain ACPL_3452 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACPL_3452 PF00672 HAMP domain ACPL_3452 PF17200 Single Cache domain 2 ACPL_3457 PF03631 Virulence factor BrkB ACPL_3458 PF00440 Bacterial regulatory proteins, tetR family ACPL_3461 PF00990 Diguanylate cyclase, GGDEF domain ACPL_3461 PF03707 Bacterial signalling protein N terminal repeat ACPL_3461 PF00563 EAL domain ACPL_3464 PF00872 Transposase, Mutator family ACPL_3465 PF01546 Peptidase family M20/M25/M40 ACPL_3465 PF07687 Peptidase dimerisation domain ACPL_3467 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_3467 PF07689 KaiB domain ACPL_3467 PF00512 His Kinase A (phospho-acceptor) domain ACPL_3468 PF00989 PAS fold ACPL_3468 PF00512 His Kinase A (phospho-acceptor) domain ACPL_3468 PF18698 Histidine kinase sensor domain ACPL_3468 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_3468 PF00672 HAMP domain ACPL_3470 PF02469 Fasciclin domain ACPL_3473 PF03793 PASTA domain ACPL_3473 PF00069 Protein kinase domain ACPL_3476 PF06745 KaiC ACPL_3476 PF18073 Rubredoxin metal binding domain ACPL_3477 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_3477 PF00512 His Kinase A (phospho-acceptor) domain ACPL_3477 PF13426 PAS domain ACPL_3477 PF00072 Response regulator receiver domain ACPL_3477 PF08448 PAS fold ACPL_3502 PF01370 NAD dependent epimerase/dehydratase family ACPL_3502 PF08338 Domain of unknown function (DUF1731) ACPL_351 PF13439 Glycosyltransferase Family 4 ACPL_351 PF00534 Glycosyl transferases group 1 ACPL_3512 PF00563 EAL domain ACPL_3512 PF03707 Bacterial signalling protein N terminal repeat ACPL_3512 PF00990 Diguanylate cyclase, GGDEF domain ACPL_3515 PF02481 DNA recombination-mediator protein A ACPL_3515 PF17782 DprA winged helix domain ACPL_3519 PF08448 PAS fold ACPL_3519 PF00990 Diguanylate cyclase, GGDEF domain ACPL_3519 PF08447 PAS fold ACPL_3519 PF00563 EAL domain ACPL_3520 PF03704 Bacterial transcriptional activator domain ACPL_3520 PF00931 NB-ARC domain ACPL_3520 PF00486 Transcriptional regulatory protein, C terminal ACPL_3523 PF09334 tRNA synthetases class I (M) ACPL_3523 PF00133 tRNA synthetases class I (I, L, M and V) ACPL_3523 PF08264 Anticodon-binding domain of tRNA ACPL_3524 PF01590 GAF domain ACPL_3524 PF08446 PAS fold ACPL_3524 PF00512 His Kinase A (phospho-acceptor) domain ACPL_3524 PF00360 Phytochrome region ACPL_3524 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_3529 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACPL_3529 PF00672 HAMP domain ACPL_353 PF16363 GDP-mannose 4,6 dehydratase ACPL_3532 PF08719 Domain of unknown function (DUF1768) ACPL_3533 PF00672 HAMP domain ACPL_3533 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_3533 PF00512 His Kinase A (phospho-acceptor) domain ACPL_3533 PF13426 PAS domain ACPL_3534 PF00672 HAMP domain ACPL_3534 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ACPL_3534 PF00072 Response regulator receiver domain ACPL_3534 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_3534 PF01627 Hpt domain ACPL_3534 PF00512 His Kinase A (phospho-acceptor) domain ACPL_3536 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ACPL_3536 PF01276 Orn/Lys/Arg decarboxylase, major domain ACPL_3537 PF02575 YbaB/EbfC DNA-binding family ACPL_354 PF00483 Nucleotidyl transferase ACPL_3545 PF01527 Transposase ACPL_3546 PF13333 Integrase core domain ACPL_3546 PF00665 Integrase core domain ACPL_3546 PF13276 HTH-like domain ACPL_3555 PF05368 NmrA-like family ACPL_3557 PF00563 EAL domain ACPL_3557 PF00990 Diguanylate cyclase, GGDEF domain ACPL_3557 PF03707 Bacterial signalling protein N terminal repeat ACPL_3560 PF00069 Protein kinase domain ACPL_3560 PF03793 PASTA domain ACPL_3562 PF00563 EAL domain ACPL_3562 PF00990 Diguanylate cyclase, GGDEF domain ACPL_3562 PF03707 Bacterial signalling protein N terminal repeat ACPL_3563 PF00563 EAL domain ACPL_3563 PF00990 Diguanylate cyclase, GGDEF domain ACPL_3563 PF03707 Bacterial signalling protein N terminal repeat ACPL_3568 PF00072 Response regulator receiver domain ACPL_3568 PF00196 Bacterial regulatory proteins, luxR family ACPL_3573 PF00440 Bacterial regulatory proteins, tetR family ACPL_3573 PF02909 Tetracyclin repressor-like, C-terminal domain ACPL_3578 PF00005 ABC transporter ACPL_3578 PF02687 FtsX-like permease family ACPL_3578 PF12704 MacB-like periplasmic core domain ACPL_3580 PF00072 Response regulator receiver domain ACPL_3580 PF00196 Bacterial regulatory proteins, luxR family ACPL_3581 PF00990 Diguanylate cyclase, GGDEF domain ACPL_3581 PF00072 Response regulator receiver domain ACPL_3583 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACPL_3589 PF02310 B12 binding domain ACPL_3589 PF04055 Radical SAM superfamily ACPL_359 PF04107 Glutamate-cysteine ligase family 2(GCS2) ACPL_3592 PF02655 ATP-grasp domain ACPL_3592 PF00206 Lyase ACPL_3594 PF01266 FAD dependent oxidoreductase ACPL_3595 PF01588 Putative tRNA binding domain ACPL_3595 PF09334 tRNA synthetases class I (M) ACPL_3596 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) ACPL_3599 PF00931 NB-ARC domain ACPL_3599 PF00486 Transcriptional regulatory protein, C terminal ACPL_3599 PF03704 Bacterial transcriptional activator domain ACPL_3603 PF00857 Isochorismatase family ACPL_3604 PF00107 Zinc-binding dehydrogenase ACPL_3604 PF08240 Alcohol dehydrogenase GroES-like domain ACPL_3604 PF13823 Alcohol dehydrogenase GroES-associated ACPL_3605 PF00561 alpha/beta hydrolase fold ACPL_3606 PF00440 Bacterial regulatory proteins, tetR family ACPL_3607 PF01370 NAD dependent epimerase/dehydratase family ACPL_361 PF04545 Sigma-70, region 4 ACPL_361 PF04542 Sigma-70 region 2 ACPL_361 PF04539 Sigma-70 region 3 ACPL_3611 PF12796 Ankyrin repeats (3 copies) ACPL_3611 PF00023 Ankyrin repeat ACPL_3614 PF13188 PAS domain ACPL_3614 PF00990 Diguanylate cyclase, GGDEF domain ACPL_3614 PF00563 EAL domain ACPL_3614 PF03707 Bacterial signalling protein N terminal repeat ACPL_3616 PF03704 Bacterial transcriptional activator domain ACPL_3618 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ACPL_362 PF04107 Glutamate-cysteine ligase family 2(GCS2) ACPL_3623 PF03793 PASTA domain ACPL_3623 PF00069 Protein kinase domain ACPL_3626 PF00356 Bacterial regulatory proteins, lacI family ACPL_3628 PF00561 alpha/beta hydrolase fold ACPL_363 PF07478 D-ala D-ala ligase C-terminus ACPL_3633 PF18665 Tetracyclin repressor-like, C-terminal domain ACPL_3633 PF00440 Bacterial regulatory proteins, tetR family ACPL_3635 PF12538 DNA transporter ACPL_3635 PF01580 FtsK/SpoIIIE family ACPL_3639 PF05593 RHS Repeat ACPL_3639 PF03527 RHS protein ACPL_364 PF00155 Aminotransferase class I and II ACPL_3641 PF02522 Aminoglycoside 3-N-acetyltransferase ACPL_3646 PF00563 EAL domain ACPL_3646 PF00990 Diguanylate cyclase, GGDEF domain ACPL_3646 PF03707 Bacterial signalling protein N terminal repeat ACPL_3647 PF16591 Helical bimodular sensor domain ACPL_3647 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACPL_3647 PF00672 HAMP domain ACPL_3652 PF02156 Glycosyl hydrolase family 26 ACPL_3653 PF00356 Bacterial regulatory proteins, lacI family ACPL_3654 PF00480 ROK family ACPL_3657 PF01047 MarR family ACPL_3658 PF00723 Glycosyl hydrolases family 15 ACPL_3659 PF00563 EAL domain ACPL_3659 PF03707 Bacterial signalling protein N terminal repeat ACPL_3659 PF00990 Diguanylate cyclase, GGDEF domain ACPL_3660 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain ACPL_3660 PF04616 Glycosyl hydrolases family 43 ACPL_3661 PF00990 Diguanylate cyclase, GGDEF domain ACPL_3661 PF00563 EAL domain ACPL_3661 PF03707 Bacterial signalling protein N terminal repeat ACPL_3663 PF03714 Bacterial pullanase-associated domain ACPL_3663 PF00128 Alpha amylase, catalytic domain ACPL_3663 PF02806 Alpha amylase, C-terminal all-beta domain ACPL_3666 PF00005 ABC transporter ACPL_3667 PF00202 Aminotransferase class-III ACPL_3670 PF00483 Nucleotidyl transferase ACPL_3674 PF02446 4-alpha-glucanotransferase ACPL_3675 PF00294 pfkB family carbohydrate kinase ACPL_3676 PF00480 ROK family ACPL_3679 PF01261 Xylose isomerase-like TIM barrel ACPL_3680 PF01761 3-dehydroquinate synthase ACPL_3681 PF16363 GDP-mannose 4,6 dehydratase ACPL_3682 PF00483 Nucleotidyl transferase ACPL_3683 PF03714 Bacterial pullanase-associated domain ACPL_3683 PF02806 Alpha amylase, C-terminal all-beta domain ACPL_3683 PF00128 Alpha amylase, catalytic domain ACPL_3684 PF00686 Starch binding domain ACPL_3684 PF01833 IPT/TIG domain ACPL_3684 PF02806 Alpha amylase, C-terminal all-beta domain ACPL_3684 PF00128 Alpha amylase, catalytic domain ACPL_3686 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_3688 PF00331 Glycosyl hydrolase family 10 ACPL_3688 PF00652 Ricin-type beta-trefoil lectin domain ACPL_3689 PF00657 GDSL-like Lipase/Acylhydrolase ACPL_3689 PF00404 Dockerin type I domain ACPL_3690 PF05368 NmrA-like family ACPL_3691 PF01638 HxlR-like helix-turn-helix ACPL_3699 PF00360 Phytochrome region ACPL_3699 PF08446 PAS fold ACPL_3699 PF00512 His Kinase A (phospho-acceptor) domain ACPL_3699 PF01590 GAF domain ACPL_3699 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_3702 PF16197 Ketoacyl-synthetase C-terminal extension ACPL_3702 PF00550 Phosphopantetheine attachment site ACPL_3702 PF00109 Beta-ketoacyl synthase, N-terminal domain ACPL_3702 PF02801 Beta-ketoacyl synthase, C-terminal domain ACPL_3702 PF14765 Polyketide synthase dehydratase ACPL_3702 PF08240 Alcohol dehydrogenase GroES-like domain ACPL_3702 PF00698 Acyl transferase domain ACPL_3702 PF08659 KR domain ACPL_3707 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ACPL_3707 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_3707 PF00072 Response regulator receiver domain ACPL_3707 PF00512 His Kinase A (phospho-acceptor) domain ACPL_3707 PF01627 Hpt domain ACPL_3707 PF00672 HAMP domain ACPL_3708 PF04542 Sigma-70 region 2 ACPL_3708 PF04545 Sigma-70, region 4 ACPL_3708 PF04539 Sigma-70 region 3 ACPL_3709 PF02203 Tar ligand binding domain homologue ACPL_3709 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACPL_3709 PF00672 HAMP domain ACPL_3711 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ACPL_3711 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ACPL_3715 PF00403 Heavy-metal-associated domain ACPL_3716 PF01022 Bacterial regulatory protein, arsR family ACPL_372 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ACPL_372 PF03129 Anticodon binding domain ACPL_372 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ACPL_3723 PF00005 ABC transporter ACPL_3725 PF17137 Domain of unknown function (DUF5110) ACPL_3725 PF16338 Domain of unknown function (DUF4968) ACPL_3725 PF01055 Glycosyl hydrolases family 31 ACPL_3725 PF13802 Galactose mutarotase-like ACPL_3731 PF07670 Nucleoside recognition ACPL_3731 PF17910 FeoB cytosolic helical domain ACPL_3731 PF04023 FeoA domain ACPL_3731 PF07664 Ferrous iron transport protein B C terminus ACPL_3731 PF02421 Ferrous iron transport protein B ACPL_3732 PF00313 'Cold-shock' DNA-binding domain ACPL_3735 PF02839 Carbohydrate binding domain ACPL_3737 PF04542 Sigma-70 region 2 ACPL_3737 PF12680 SnoaL-like domain ACPL_3737 PF08281 Sigma-70, region 4 ACPL_3739 PF00144 Beta-lactamase ACPL_3741 PF00486 Transcriptional regulatory protein, C terminal ACPL_3741 PF00072 Response regulator receiver domain ACPL_3742 PF00512 His Kinase A (phospho-acceptor) domain ACPL_3742 PF00672 HAMP domain ACPL_3742 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_3743 PF03176 MMPL family ACPL_375 PF00005 ABC transporter ACPL_3760 PF00781 Diacylglycerol kinase catalytic domain ACPL_3762 PF00440 Bacterial regulatory proteins, tetR family ACPL_3763 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ACPL_3763 PF01266 FAD dependent oxidoreductase ACPL_3773 PF06965 Na+/H+ antiporter 1 ACPL_3779 PF00990 Diguanylate cyclase, GGDEF domain ACPL_3779 PF03707 Bacterial signalling protein N terminal repeat ACPL_3779 PF00563 EAL domain ACPL_3781 PF01546 Peptidase family M20/M25/M40 ACPL_3781 PF07687 Peptidase dimerisation domain ACPL_3782 PF00005 ABC transporter ACPL_3784 PF00497 Bacterial extracellular solute-binding proteins, family 3 ACPL_3786 PF03575 Peptidase family S51 ACPL_379 PF00072 Response regulator receiver domain ACPL_379 PF00486 Transcriptional regulatory protein, C terminal ACPL_3790 PF13188 PAS domain ACPL_3790 PF03707 Bacterial signalling protein N terminal repeat ACPL_3790 PF00990 Diguanylate cyclase, GGDEF domain ACPL_3790 PF00563 EAL domain ACPL_3792 PF01593 Flavin containing amine oxidoreductase ACPL_3793 PF04226 Transglycosylase associated protein ACPL_3798 PF12697 Alpha/beta hydrolase family ACPL_380 PF09456 RcsC Alpha-Beta-Loop (ABL) ACPL_380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_380 PF00072 Response regulator receiver domain ACPL_380 PF00512 His Kinase A (phospho-acceptor) domain ACPL_3803 PF00005 ABC transporter ACPL_3803 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ACPL_3808 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ACPL_3815 PF00005 ABC transporter ACPL_3817 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_3817 PF07730 Histidine kinase ACPL_3818 PF00196 Bacterial regulatory proteins, luxR family ACPL_3818 PF00072 Response regulator receiver domain ACPL_382 PF13581 Histidine kinase-like ATPase domain ACPL_3821 PF00005 ABC transporter ACPL_383 PF01740 STAS domain ACPL_3833 PF03364 Polyketide cyclase / dehydrase and lipid transport ACPL_384 PF01740 STAS domain ACPL_384 PF08678 Rsbr N terminal ACPL_3845 PF00117 Glutamine amidotransferase class-I ACPL_3845 PF13673 Acetyltransferase (GNAT) domain ACPL_3845 PF13302 Acetyltransferase (GNAT) domain ACPL_3845 PF03352 Methyladenine glycosylase ACPL_3845 PF00958 GMP synthase C terminal domain ACPL_3846 PF02698 DUF218 domain ACPL_3847 PF12697 Alpha/beta hydrolase family ACPL_3848 PF00266 Aminotransferase class-V ACPL_3849 PF00072 Response regulator receiver domain ACPL_3849 PF00196 Bacterial regulatory proteins, luxR family ACPL_3850 PF07730 Histidine kinase ACPL_3852 PF00356 Bacterial regulatory proteins, lacI family ACPL_3853 PF00480 ROK family ACPL_3853 PF01047 MarR family ACPL_3854 PF00990 Diguanylate cyclase, GGDEF domain ACPL_3855 PF02156 Glycosyl hydrolase family 26 ACPL_3858 PF00990 Diguanylate cyclase, GGDEF domain ACPL_3858 PF00072 Response regulator receiver domain ACPL_386 PF01741 Large-conductance mechanosensitive channel, MscL ACPL_3866 PF00294 pfkB family carbohydrate kinase ACPL_3868 PF00356 Bacterial regulatory proteins, lacI family ACPL_3869 PF00480 ROK family ACPL_3869 PF01047 MarR family ACPL_3871 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_3872 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_3876 PF00664 ABC transporter transmembrane region ACPL_3876 PF00005 ABC transporter ACPL_3879 PF02156 Glycosyl hydrolase family 26 ACPL_3881 PF07681 DoxX ACPL_3891 PF07690 Major Facilitator Superfamily ACPL_3892 PF03466 LysR substrate binding domain ACPL_3892 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACPL_3896 PF08241 Methyltransferase domain ACPL_3909 PF01266 FAD dependent oxidoreductase ACPL_3909 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ACPL_3910 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ACPL_3910 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ACPL_3911 PF01614 Bacterial transcriptional regulator ACPL_3911 PF09339 IclR helix-turn-helix domain ACPL_3912 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ACPL_3912 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ACPL_3913 PF04542 Sigma-70 region 2 ACPL_3913 PF08281 Sigma-70, region 4 ACPL_3914 PF03795 YCII-related domain ACPL_3916 PF00743 Flavin-binding monooxygenase-like ACPL_3917 PF00106 short chain dehydrogenase ACPL_3922 PF00563 EAL domain ACPL_3922 PF08448 PAS fold ACPL_3922 PF00990 Diguanylate cyclase, GGDEF domain ACPL_3922 PF08447 PAS fold ACPL_3923 PF13458 Periplasmic binding protein ACPL_3924 PF09297 NADH pyrophosphatase zinc ribbon domain ACPL_3924 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain ACPL_3924 PF00293 NUDIX domain ACPL_393 PF00326 Prolyl oligopeptidase family ACPL_393 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ACPL_3933 PF01494 FAD binding domain ACPL_3937 PF05368 NmrA-like family ACPL_3942 PF00990 Diguanylate cyclase, GGDEF domain ACPL_3942 PF00072 Response regulator receiver domain ACPL_3944 PF12833 Helix-turn-helix domain ACPL_3944 PF02311 AraC-like ligand binding domain ACPL_3947 PF00348 Polyprenyl synthetase ACPL_3948 PF07690 Major Facilitator Superfamily ACPL_395 PF01872 RibD C-terminal domain ACPL_3950 PF13520 Amino acid permease ACPL_3953 PF03466 LysR substrate binding domain ACPL_3953 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACPL_3954 PF00459 Inositol monophosphatase family ACPL_3958 PF13761 Domain of unknown function (DUF4166) ACPL_396 PF01872 RibD C-terminal domain ACPL_3961 PF12833 Helix-turn-helix domain ACPL_3961 PF01965 DJ-1/PfpI family ACPL_3968 PF00067 Cytochrome P450 ACPL_3970 PF00690 Cation transporter/ATPase, N-terminus ACPL_3970 PF00689 Cation transporting ATPase, C-terminus ACPL_3973 PF04107 Glutamate-cysteine ligase family 2(GCS2) ACPL_398 PF09308 LuxQ, periplasmic ACPL_398 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_398 PF00072 Response regulator receiver domain ACPL_398 PF00512 His Kinase A (phospho-acceptor) domain ACPL_3983 PF01594 AI-2E family transporter ACPL_3989 PF17874 MalT-like TPR region ACPL_3989 PF00196 Bacterial regulatory proteins, luxR family ACPL_399 PF00486 Transcriptional regulatory protein, C terminal ACPL_399 PF00072 Response regulator receiver domain ACPL_3991 PF00196 Bacterial regulatory proteins, luxR family ACPL_3991 PF17874 MalT-like TPR region ACPL_3994 PF13520 Amino acid permease ACPL_3996 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ACPL_3996 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ACPL_3997 PF00696 Amino acid kinase family ACPL_400 PF03211 Pectate lyase ACPL_4004 PF07690 Major Facilitator Superfamily ACPL_4009 PF00781 Diacylglycerol kinase catalytic domain ACPL_4020 PF13520 Amino acid permease ACPL_4023 PF07690 Major Facilitator Superfamily ACPL_4024 PF00557 Metallopeptidase family M24 ACPL_4024 PF01321 Creatinase/Prolidase N-terminal domain ACPL_4027 PF03707 Bacterial signalling protein N terminal repeat ACPL_4027 PF00563 EAL domain ACPL_4027 PF00990 Diguanylate cyclase, GGDEF domain ACPL_4028 PF01256 Carbohydrate kinase ACPL_4029 PF00300 Histidine phosphatase superfamily (branch 1) ACPL_403 PF01740 STAS domain ACPL_4034 PF02627 Carboxymuconolactone decarboxylase family ACPL_4038 PF02585 GlcNAc-PI de-N-acetylase ACPL_404 PF00202 Aminotransferase class-III ACPL_4040 PF01594 AI-2E family transporter ACPL_4043 PF03466 LysR substrate binding domain ACPL_4043 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACPL_4045 PF12680 SnoaL-like domain ACPL_4046 PF01022 Bacterial regulatory protein, arsR family ACPL_4048 PF00072 Response regulator receiver domain ACPL_4048 PF00486 Transcriptional regulatory protein, C terminal ACPL_4049 PF00989 PAS fold ACPL_4049 PF00512 His Kinase A (phospho-acceptor) domain ACPL_4049 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_4049 PF16736 Single Cache-like ACPL_405 PF00300 Histidine phosphatase superfamily (branch 1) ACPL_4052 PF00704 Glycosyl hydrolases family 18 ACPL_4052 PF00041 Fibronectin type III domain ACPL_4052 PF02018 Carbohydrate binding domain ACPL_4055 PF13411 MerR HTH family regulatory protein ACPL_4055 PF07739 TipAS antibiotic-recognition domain ACPL_4059 PF00563 EAL domain ACPL_4059 PF03707 Bacterial signalling protein N terminal repeat ACPL_4059 PF00990 Diguanylate cyclase, GGDEF domain ACPL_406 PF00578 AhpC/TSA family ACPL_4061 PF00440 Bacterial regulatory proteins, tetR family ACPL_4062 PF01494 FAD binding domain ACPL_4069 PF00196 Bacterial regulatory proteins, luxR family ACPL_407 PF02683 Cytochrome C biogenesis protein transmembrane region ACPL_4070 PF13191 AAA ATPase domain ACPL_4070 PF00211 Adenylate and Guanylate cyclase catalytic domain ACPL_4072 PF01636 Phosphotransferase enzyme family ACPL_4073 PF00440 Bacterial regulatory proteins, tetR family ACPL_4074 PF01494 FAD binding domain ACPL_4078 PF00069 Protein kinase domain ACPL_4079 PF00171 Aldehyde dehydrogenase family ACPL_4080 PF00202 Aminotransferase class-III ACPL_4081 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACPL_4081 PF03466 LysR substrate binding domain ACPL_4085 PF02687 FtsX-like permease family ACPL_4085 PF12704 MacB-like periplasmic core domain ACPL_4085 PF00005 ABC transporter ACPL_4086 PF02687 FtsX-like permease family ACPL_4086 PF12704 MacB-like periplasmic core domain ACPL_4086 PF00005 ABC transporter ACPL_4087 PF01042 Endoribonuclease L-PSP ACPL_409 PF01578 Cytochrome C assembly protein ACPL_4095 PF00672 HAMP domain ACPL_4095 PF07228 Stage II sporulation protein E (SpoIIE) ACPL_4099 PF00553 Cellulose binding domain ACPL_4099 PF00150 Cellulase (glycosyl hydrolase family 5) ACPL_4104 PF00535 Glycosyl transferase family 2 ACPL_4104 PF07238 PilZ domain ACPL_4104 PF03552 Cellulose synthase ACPL_4104 PF03170 Bacterial cellulose synthase subunit ACPL_411 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ACPL_4110 PF13193 AMP-binding enzyme C-terminal domain ACPL_4110 PF00975 Thioesterase domain ACPL_4110 PF00550 Phosphopantetheine attachment site ACPL_4110 PF00501 AMP-binding enzyme ACPL_4110 PF00668 Condensation domain ACPL_4115 PF03621 MbtH-like protein ACPL_4117 PF00196 Bacterial regulatory proteins, luxR family ACPL_4119 PF05922 Peptidase inhibitor I9 ACPL_4119 PF00082 Subtilase family ACPL_412 PF01040 UbiA prenyltransferase family ACPL_4120 PF14521 Lysine-specific metallo-endopeptidase ACPL_4122 PF00291 Pyridoxal-phosphate dependent enzyme ACPL_4123 PF13193 AMP-binding enzyme C-terminal domain ACPL_4123 PF00550 Phosphopantetheine attachment site ACPL_4123 PF00668 Condensation domain ACPL_4123 PF00501 AMP-binding enzyme ACPL_4128 PF00296 Luciferase-like monooxygenase ACPL_413 PF02441 Flavoprotein ACPL_4130 PF00668 Condensation domain ACPL_4130 PF00550 Phosphopantetheine attachment site ACPL_4130 PF13193 AMP-binding enzyme C-terminal domain ACPL_4130 PF00501 AMP-binding enzyme ACPL_4131 PF00550 Phosphopantetheine attachment site ACPL_4131 PF13193 AMP-binding enzyme C-terminal domain ACPL_4131 PF00668 Condensation domain ACPL_4131 PF00501 AMP-binding enzyme ACPL_4133 PF07690 Major Facilitator Superfamily ACPL_4134 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ACPL_4134 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ACPL_4135 PF00202 Aminotransferase class-III ACPL_4136 PF00072 Response regulator receiver domain ACPL_4136 PF00196 Bacterial regulatory proteins, luxR family ACPL_4137 PF00196 Bacterial regulatory proteins, luxR family ACPL_4141 PF08281 Sigma-70, region 4 ACPL_4141 PF04542 Sigma-70 region 2 ACPL_4145 PF00535 Glycosyl transferase family 2 ACPL_4149 PF00282 Pyridoxal-dependent decarboxylase conserved domain ACPL_4152 PF00563 EAL domain ACPL_4152 PF03707 Bacterial signalling protein N terminal repeat ACPL_4152 PF00990 Diguanylate cyclase, GGDEF domain ACPL_4155 PF07730 Histidine kinase ACPL_4155 PF13185 GAF domain ACPL_4155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_4155 PF13492 GAF domain ACPL_4156 PF00196 Bacterial regulatory proteins, luxR family ACPL_4156 PF00072 Response regulator receiver domain ACPL_4159 PF00912 Transglycosylase ACPL_4159 PF00905 Penicillin binding protein transpeptidase domain ACPL_4160 PF00248 Aldo/keto reductase family ACPL_4161 PF07298 NnrU protein ACPL_4162 PF02589 LUD domain ACPL_4163 PF02589 LUD domain ACPL_4163 PF11870 Domain of unknown function (DUF3390) ACPL_4163 PF13183 4Fe-4S dicluster domain ACPL_4164 PF02754 Cysteine-rich domain ACPL_4165 PF01557 Fumarylacetoacetate (FAA) hydrolase family ACPL_4166 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ACPL_4166 PF01842 ACT domain ACPL_4166 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ACPL_4167 PF00005 ABC transporter ACPL_4168 PF02653 Branched-chain amino acid transport system / permease component ACPL_4169 PF02653 Branched-chain amino acid transport system / permease component ACPL_4171 PF00392 Bacterial regulatory proteins, gntR family ACPL_4171 PF07729 FCD domain ACPL_4173 PF08240 Alcohol dehydrogenase GroES-like domain ACPL_4173 PF00107 Zinc-binding dehydrogenase ACPL_4174 PF00392 Bacterial regulatory proteins, gntR family ACPL_4174 PF07729 FCD domain ACPL_4176 PF00672 HAMP domain ACPL_4176 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACPL_4177 PF00072 Response regulator receiver domain ACPL_4177 PF00990 Diguanylate cyclase, GGDEF domain ACPL_4178 PF00990 Diguanylate cyclase, GGDEF domain ACPL_4178 PF00563 EAL domain ACPL_4178 PF03707 Bacterial signalling protein N terminal repeat ACPL_418 PF00271 Helicase conserved C-terminal domain ACPL_418 PF00270 DEAD/DEAH box helicase ACPL_4185 PF00392 Bacterial regulatory proteins, gntR family ACPL_4185 PF07729 FCD domain ACPL_4189 PF00392 Bacterial regulatory proteins, gntR family ACPL_4189 PF07729 FCD domain ACPL_4190 PF00561 alpha/beta hydrolase fold ACPL_4190 PF08386 TAP-like protein ACPL_4191 PF16736 Single Cache-like ACPL_4191 PF00989 PAS fold ACPL_4191 PF00512 His Kinase A (phospho-acceptor) domain ACPL_4191 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_4192 PF00072 Response regulator receiver domain ACPL_4192 PF00486 Transcriptional regulatory protein, C terminal ACPL_4195 PF12704 MacB-like periplasmic core domain ACPL_4195 PF02687 FtsX-like permease family ACPL_4195 PF00005 ABC transporter ACPL_4196 PF02687 FtsX-like permease family ACPL_4196 PF12704 MacB-like periplasmic core domain ACPL_4196 PF00005 ABC transporter ACPL_420 PF00877 NlpC/P60 family ACPL_4200 PF01545 Cation efflux family ACPL_4200 PF16916 Dimerisation domain of Zinc Transporter ACPL_4201 PF01022 Bacterial regulatory protein, arsR family ACPL_421 PF04055 Radical SAM superfamily ACPL_4211 PF01209 ubiE/COQ5 methyltransferase family ACPL_4214 PF04542 Sigma-70 region 2 ACPL_4214 PF08281 Sigma-70, region 4 ACPL_4219 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACPL_4219 PF16591 Helical bimodular sensor domain ACPL_4219 PF00672 HAMP domain ACPL_4223 PF03795 YCII-related domain ACPL_4224 PF04542 Sigma-70 region 2 ACPL_4224 PF08281 Sigma-70, region 4 ACPL_4227 PF03466 LysR substrate binding domain ACPL_4227 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACPL_4229 PF00106 short chain dehydrogenase ACPL_4236 PF00440 Bacterial regulatory proteins, tetR family ACPL_4239 PF00072 Response regulator receiver domain ACPL_4239 PF00196 Bacterial regulatory proteins, luxR family ACPL_424 PF01497 Periplasmic binding protein ACPL_4240 PF07730 Histidine kinase ACPL_4243 PF00561 alpha/beta hydrolase fold ACPL_4245 PF03795 YCII-related domain ACPL_4246 PF08281 Sigma-70, region 4 ACPL_4246 PF04542 Sigma-70 region 2 ACPL_425 PF01032 FecCD transport family ACPL_4250 PF10502 Signal peptidase, peptidase S26 ACPL_4251 PF03466 LysR substrate binding domain ACPL_4251 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACPL_4254 PF01361 Tautomerase enzyme ACPL_426 PF00005 ABC transporter ACPL_4262 PF00239 Resolvase, N terminal domain ACPL_4262 PF02796 Helix-turn-helix domain of resolvase ACPL_4263 PF08240 Alcohol dehydrogenase GroES-like domain ACPL_4263 PF00107 Zinc-binding dehydrogenase ACPL_4265 PF00106 short chain dehydrogenase ACPL_4269 PF02796 Helix-turn-helix domain of resolvase ACPL_4269 PF00239 Resolvase, N terminal domain ACPL_427 PF01313 Bacterial export proteins, family 3 ACPL_4271 PF09828 Chromate resistance exported protein ACPL_4277 PF16916 Dimerisation domain of Zinc Transporter ACPL_4277 PF01545 Cation efflux family ACPL_428 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ACPL_428 PF18029 Glyoxalase-like domain ACPL_4283 PF03741 Integral membrane protein TerC family ACPL_4285 PF00108 Thiolase, N-terminal domain ACPL_4285 PF02803 Thiolase, C-terminal domain ACPL_4287 PF11838 ERAP1-like C-terminal domain ACPL_4287 PF01433 Peptidase family M1 domain ACPL_4290 PF00701 Dihydrodipicolinate synthetase family ACPL_4294 PF02861 Clp amino terminal domain, pathogenicity island component ACPL_4296 PF00005 ABC transporter ACPL_4298 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_4298 PF07730 Histidine kinase ACPL_4299 PF00196 Bacterial regulatory proteins, luxR family ACPL_4299 PF00072 Response regulator receiver domain ACPL_4300 PF04545 Sigma-70, region 4 ACPL_4300 PF04542 Sigma-70 region 2 ACPL_4300 PF04539 Sigma-70 region 3 ACPL_4302 PF00155 Aminotransferase class I and II ACPL_4303 PF00005 ABC transporter ACPL_4304 PF02899 Phage integrase, N-terminal SAM-like domain ACPL_4304 PF00589 Phage integrase family ACPL_4305 PF02673 Bacitracin resistance protein BacA ACPL_4308 PF00293 NUDIX domain ACPL_4310 PF02899 Phage integrase, N-terminal SAM-like domain ACPL_4310 PF00589 Phage integrase family ACPL_4311 PF00326 Prolyl oligopeptidase family ACPL_4311 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region ACPL_4313 PF13649 Methyltransferase domain ACPL_4319 PF08659 KR domain ACPL_4319 PF02801 Beta-ketoacyl synthase, C-terminal domain ACPL_4319 PF14765 Polyketide synthase dehydratase ACPL_4319 PF16197 Ketoacyl-synthetase C-terminal extension ACPL_4319 PF09277 Erythronolide synthase, docking ACPL_4319 PF08990 Erythronolide synthase docking ACPL_4319 PF08240 Alcohol dehydrogenase GroES-like domain ACPL_4319 PF00698 Acyl transferase domain ACPL_4319 PF00550 Phosphopantetheine attachment site ACPL_4319 PF00109 Beta-ketoacyl synthase, N-terminal domain ACPL_432 PF13538 UvrD-like helicase C-terminal domain ACPL_4321 PF00106 short chain dehydrogenase ACPL_4324 PF01037 Lrp/AsnC ligand binding domain ACPL_4325 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ACPL_4325 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ACPL_4327 PF00248 Aldo/keto reductase family ACPL_4335 PF00196 Bacterial regulatory proteins, luxR family ACPL_4335 PF00072 Response regulator receiver domain ACPL_4336 PF00350 Dynamin family ACPL_4337 PF00350 Dynamin family ACPL_4339 PF11700 Vacuole effluxer Atg22 like ACPL_4345 PF00893 Small Multidrug Resistance protein ACPL_4348 PF01494 FAD binding domain ACPL_4349 PF13847 Methyltransferase domain ACPL_435 PF02621 Menaquinone biosynthesis ACPL_4351 PF03928 Haem-degrading ACPL_4352 PF01925 Sulfite exporter TauE/SafE ACPL_4356 PF01047 MarR family ACPL_4357 PF02566 OsmC-like protein ACPL_436 PF00248 Aldo/keto reductase family ACPL_4367 PF00890 FAD binding domain ACPL_437 PF04434 SWIM zinc finger ACPL_4370 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ACPL_4370 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ACPL_4371 PF05139 Erythromycin esterase ACPL_4372 PF02423 Ornithine cyclodeaminase/mu-crystallin family ACPL_4376 PF03707 Bacterial signalling protein N terminal repeat ACPL_4376 PF00990 Diguanylate cyclase, GGDEF domain ACPL_4376 PF00563 EAL domain ACPL_438 PF12419 SNF2 Helicase protein ACPL_438 PF00271 Helicase conserved C-terminal domain ACPL_438 PF00176 SNF2 family N-terminal domain ACPL_4380 PF00248 Aldo/keto reductase family ACPL_4385 PF07726 ATPase family associated with various cellular activities (AAA) ACPL_4385 PF17863 AAA lid domain ACPL_4391 PF00106 short chain dehydrogenase ACPL_4397 PF03572 Peptidase family S41 ACPL_440 PF00440 Bacterial regulatory proteins, tetR family ACPL_4406 PF01327 Polypeptide deformylase ACPL_4409 PF08281 Sigma-70, region 4 ACPL_4409 PF04542 Sigma-70 region 2 ACPL_441 PF04055 Radical SAM superfamily ACPL_4410 PF00425 chorismate binding enzyme ACPL_4410 PF04715 Anthranilate synthase component I, N terminal region ACPL_4412 PF02347 Glycine cleavage system P-protein ACPL_4413 PF00248 Aldo/keto reductase family ACPL_4416 PF01209 ubiE/COQ5 methyltransferase family ACPL_442 PF01209 ubiE/COQ5 methyltransferase family ACPL_4428 PF03239 Iron permease FTR1 family ACPL_4429 PF13473 Cupredoxin-like domain ACPL_4429 PF09375 Imelysin ACPL_4430 PF10518 TAT (twin-arginine translocation) pathway signal sequence ACPL_4430 PF04261 Dyp-type peroxidase family ACPL_4436 PF00271 Helicase conserved C-terminal domain ACPL_4436 PF00270 DEAD/DEAH box helicase ACPL_4436 PF08148 DSHCT (NUC185) domain ACPL_444 PF01494 FAD binding domain ACPL_4444 PF01494 FAD binding domain ACPL_4445 PF00005 ABC transporter ACPL_4449 PF13419 Haloacid dehalogenase-like hydrolase ACPL_445 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ACPL_4451 PF01494 FAD binding domain ACPL_4454 PF00107 Zinc-binding dehydrogenase ACPL_4454 PF13823 Alcohol dehydrogenase GroES-associated ACPL_4454 PF08240 Alcohol dehydrogenase GroES-like domain ACPL_4456 PF13180 PDZ domain ACPL_4459 PF04075 F420H(2)-dependent quinone reductase ACPL_446 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ACPL_4461 PF00106 short chain dehydrogenase ACPL_4463 PF03109 ABC1 family ACPL_4466 PF00561 alpha/beta hydrolase fold ACPL_4468 PF00313 'Cold-shock' DNA-binding domain ACPL_4469 PF01809 Putative membrane protein insertion efficiency factor ACPL_447 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ACPL_4471 PF00196 Bacterial regulatory proteins, luxR family ACPL_448 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ACPL_4486 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ACPL_4488 PF00497 Bacterial extracellular solute-binding proteins, family 3 ACPL_4489 PF12729 Four helix bundle sensory module for signal transduction ACPL_4489 PF00672 HAMP domain ACPL_4489 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACPL_4499 PF03033 Glycosyltransferase family 28 N-terminal domain ACPL_450 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ACPL_450 PF10531 SLBB domain ACPL_450 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ACPL_4500 PF02903 Alpha amylase, N-terminal ig-like domain ACPL_4500 PF00128 Alpha amylase, catalytic domain ACPL_4500 PF16657 Maltogenic Amylase, C-terminal domain ACPL_4503 PF00378 Enoyl-CoA hydratase/isomerase ACPL_4506 PF00378 Enoyl-CoA hydratase/isomerase ACPL_4507 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACPL_4507 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ACPL_4508 PF00486 Transcriptional regulatory protein, C terminal ACPL_4508 PF00072 Response regulator receiver domain ACPL_4509 PF07690 Major Facilitator Superfamily ACPL_451 PF00384 Molybdopterin oxidoreductase ACPL_451 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ACPL_451 PF01568 Molydopterin dinucleotide binding domain ACPL_4512 PF00746 LPXTG cell wall anchor motif ACPL_4516 PF03313 Serine dehydratase alpha chain ACPL_4516 PF03315 Serine dehydratase beta chain ACPL_4517 PF01571 Aminomethyltransferase folate-binding domain ACPL_4517 PF08669 Glycine cleavage T-protein C-terminal barrel domain ACPL_4519 PF06964 Alpha-L-arabinofuranosidase C-terminal domain ACPL_452 PF00146 NADH dehydrogenase ACPL_4523 PF08281 Sigma-70, region 4 ACPL_4523 PF12680 SnoaL-like domain ACPL_4523 PF04542 Sigma-70 region 2 ACPL_4524 PF01638 HxlR-like helix-turn-helix ACPL_4526 PF00440 Bacterial regulatory proteins, tetR family ACPL_4526 PF16925 Tetracyclin repressor-like, C-terminal domain ACPL_453 PF12838 4Fe-4S dicluster domain ACPL_4531 PF00005 ABC transporter ACPL_4532 PF00005 ABC transporter ACPL_4532 PF00664 ABC transporter transmembrane region ACPL_4535 PF00069 Protein kinase domain ACPL_4538 PF00535 Glycosyl transferase family 2 ACPL_454 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ACPL_4544 PF00665 Integrase core domain ACPL_4548 PF00501 AMP-binding enzyme ACPL_4548 PF13193 AMP-binding enzyme C-terminal domain ACPL_455 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ACPL_4551 PF00990 Diguanylate cyclase, GGDEF domain ACPL_4551 PF13426 PAS domain ACPL_4551 PF00563 EAL domain ACPL_4556 PF00005 ABC transporter ACPL_4556 PF13732 Domain of unknown function (DUF4162) ACPL_4557 PF01061 ABC-2 type transporter ACPL_456 PF00361 Proton-conducting membrane transporter ACPL_456 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ACPL_4563 PF17200 Single Cache domain 2 ACPL_4563 PF07730 Histidine kinase ACPL_4564 PF00196 Bacterial regulatory proteins, luxR family ACPL_4564 PF00072 Response regulator receiver domain ACPL_4569 PF01638 HxlR-like helix-turn-helix ACPL_457 PF00361 Proton-conducting membrane transporter ACPL_4570 PF13460 NAD(P)H-binding ACPL_4572 PF00107 Zinc-binding dehydrogenase ACPL_4572 PF08240 Alcohol dehydrogenase GroES-like domain ACPL_4576 PF00296 Luciferase-like monooxygenase ACPL_458 PF00361 Proton-conducting membrane transporter ACPL_459 PF00348 Polyprenyl synthetase ACPL_4590 PF01161 Phosphatidylethanolamine-binding protein ACPL_4598 PF02540 NAD synthase ACPL_4599 PF18029 Glyoxalase-like domain ACPL_4601 PF01022 Bacterial regulatory protein, arsR family ACPL_4603 PF00701 Dihydrodipicolinate synthetase family ACPL_4604 PF00155 Aminotransferase class I and II ACPL_4604 PF00392 Bacterial regulatory proteins, gntR family ACPL_4605 PF13426 PAS domain ACPL_4605 PF08448 PAS fold ACPL_4605 PF08447 PAS fold ACPL_4605 PF05231 MASE1 ACPL_4605 PF00990 Diguanylate cyclase, GGDEF domain ACPL_4605 PF00563 EAL domain ACPL_4607 PF13229 Right handed beta helix region ACPL_4609 PF00106 short chain dehydrogenase ACPL_461 PF13490 Putative zinc-finger ACPL_4610 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ACPL_4610 PF00476 DNA polymerase family A ACPL_4610 PF09281 Taq polymerase, exonuclease ACPL_4610 PF01367 5'-3' exonuclease, C-terminal SAM fold ACPL_4611 PF00561 alpha/beta hydrolase fold ACPL_4615 PF13426 PAS domain ACPL_4615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_4615 PF00512 His Kinase A (phospho-acceptor) domain ACPL_4615 PF00672 HAMP domain ACPL_4616 PF00989 PAS fold ACPL_4616 PF00512 His Kinase A (phospho-acceptor) domain ACPL_4616 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_4617 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_4618 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_462 PF00892 EamA-like transporter family ACPL_4620 PF09278 MerR, DNA binding ACPL_4620 PF00376 MerR family regulatory protein ACPL_4627 PF00072 Response regulator receiver domain ACPL_4627 PF00990 Diguanylate cyclase, GGDEF domain ACPL_463 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV ACPL_4630 PF00561 alpha/beta hydrolase fold ACPL_4637 PF01243 Pyridoxamine 5'-phosphate oxidase ACPL_4640 PF00296 Luciferase-like monooxygenase ACPL_4643 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACPL_4644 PF01022 Bacterial regulatory protein, arsR family ACPL_4646 PF01451 Low molecular weight phosphotyrosine protein phosphatase ACPL_4649 PF00072 Response regulator receiver domain ACPL_4649 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_4649 PF13426 PAS domain ACPL_4649 PF08448 PAS fold ACPL_4649 PF00512 His Kinase A (phospho-acceptor) domain ACPL_4657 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus ACPL_4657 PF08666 SAF domain ACPL_4659 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase ACPL_4659 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase ACPL_4661 PF00356 Bacterial regulatory proteins, lacI family ACPL_4663 PF00293 NUDIX domain ACPL_4664 PF00072 Response regulator receiver domain ACPL_4665 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACPL_4666 PF00313 'Cold-shock' DNA-binding domain ACPL_4671 PF01658 Myo-inositol-1-phosphate synthase ACPL_4673 PF02146 Sir2 family ACPL_4675 PF03466 LysR substrate binding domain ACPL_4675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACPL_4679 PF02770 Acyl-CoA dehydrogenase, middle domain ACPL_4679 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACPL_4679 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACPL_4684 PF00083 Sugar (and other) transporter ACPL_4686 PF08448 PAS fold ACPL_4686 PF00563 EAL domain ACPL_4686 PF00990 Diguanylate cyclase, GGDEF domain ACPL_4686 PF08447 PAS fold ACPL_4688 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ACPL_4688 PF00128 Alpha amylase, catalytic domain ACPL_4691 PF01965 DJ-1/PfpI family ACPL_4692 PF00106 short chain dehydrogenase ACPL_4693 PF05175 Methyltransferase small domain ACPL_4693 PF17827 PrmC N-terminal domain ACPL_4694 PF04107 Glutamate-cysteine ligase family 2(GCS2) ACPL_4699 PF00067 Cytochrome P450 ACPL_470 PF00561 alpha/beta hydrolase fold ACPL_4702 PF14464 Prokaryotic homologs of the JAB domain ACPL_4703 PF00512 His Kinase A (phospho-acceptor) domain ACPL_4703 PF16736 Single Cache-like ACPL_4703 PF00989 PAS fold ACPL_4703 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_4704 PF00072 Response regulator receiver domain ACPL_4704 PF00486 Transcriptional regulatory protein, C terminal ACPL_4707 PF13847 Methyltransferase domain ACPL_4709 PF00535 Glycosyl transferase family 2 ACPL_4710 PF01370 NAD dependent epimerase/dehydratase family ACPL_472 PF00801 PKD domain ACPL_472 PF05547 Immune inhibitor A peptidase M6 ACPL_4725 PF03707 Bacterial signalling protein N terminal repeat ACPL_4725 PF00563 EAL domain ACPL_4725 PF00990 Diguanylate cyclase, GGDEF domain ACPL_4726 PF00082 Subtilase family ACPL_4727 PF00512 His Kinase A (phospho-acceptor) domain ACPL_4727 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_4727 PF00360 Phytochrome region ACPL_4727 PF08446 PAS fold ACPL_4727 PF01590 GAF domain ACPL_4728 PF01276 Orn/Lys/Arg decarboxylase, major domain ACPL_4728 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ACPL_473 PF00501 AMP-binding enzyme ACPL_473 PF13193 AMP-binding enzyme C-terminal domain ACPL_473 PF16177 Acetyl-coenzyme A synthetase N-terminus ACPL_4732 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ACPL_4732 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ACPL_4734 PF00881 Nitroreductase family ACPL_4738 PF00561 alpha/beta hydrolase fold ACPL_4742 PF00553 Cellulose binding domain ACPL_4742 PF00150 Cellulase (glycosyl hydrolase family 5) ACPL_4749 PF05977 Transmembrane secretion effector ACPL_4750 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_4751 PF09383 NIL domain ACPL_4751 PF00005 ABC transporter ACPL_4752 PF03180 NLPA lipoprotein ACPL_4759 PF04107 Glutamate-cysteine ligase family 2(GCS2) ACPL_4761 PF03551 Transcriptional regulator PadR-like family ACPL_4764 PF00291 Pyridoxal-phosphate dependent enzyme ACPL_4764 PF00571 CBS domain ACPL_4766 PF00107 Zinc-binding dehydrogenase ACPL_4766 PF08240 Alcohol dehydrogenase GroES-like domain ACPL_477 PF13466 STAS domain ACPL_4775 PF01381 Helix-turn-helix ACPL_4777 PF00931 NB-ARC domain ACPL_4777 PF00486 Transcriptional regulatory protein, C terminal ACPL_4777 PF03704 Bacterial transcriptional activator domain ACPL_4785 PF04607 Region found in RelA / SpoT proteins ACPL_479 PF00437 Type II/IV secretion system protein ACPL_4791 PF00296 Luciferase-like monooxygenase ACPL_4792 PF00578 AhpC/TSA family ACPL_4795 PF00534 Glycosyl transferases group 1 ACPL_4796 PF00149 Calcineurin-like phosphoesterase ACPL_4800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_4800 PF00672 HAMP domain ACPL_4800 PF00072 Response regulator receiver domain ACPL_4800 PF01627 Hpt domain ACPL_4800 PF00512 His Kinase A (phospho-acceptor) domain ACPL_4800 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ACPL_4801 PF00360 Phytochrome region ACPL_4801 PF01590 GAF domain ACPL_4801 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_4801 PF08446 PAS fold ACPL_4801 PF00512 His Kinase A (phospho-acceptor) domain ACPL_4803 PF00535 Glycosyl transferase family 2 ACPL_4803 PF00534 Glycosyl transferases group 1 ACPL_4804 PF00534 Glycosyl transferases group 1 ACPL_4806 PF00486 Transcriptional regulatory protein, C terminal ACPL_4806 PF00072 Response regulator receiver domain ACPL_4809 PF00672 HAMP domain ACPL_4809 PF01627 Hpt domain ACPL_4809 PF00072 Response regulator receiver domain ACPL_4809 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ACPL_4809 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_4809 PF00512 His Kinase A (phospho-acceptor) domain ACPL_4813 PF08447 PAS fold ACPL_4813 PF08448 PAS fold ACPL_4813 PF00563 EAL domain ACPL_4813 PF00990 Diguanylate cyclase, GGDEF domain ACPL_4816 PF00563 EAL domain ACPL_4816 PF00990 Diguanylate cyclase, GGDEF domain ACPL_4816 PF03707 Bacterial signalling protein N terminal repeat ACPL_4820 PF00106 short chain dehydrogenase ACPL_4821 PF00563 EAL domain ACPL_4821 PF00990 Diguanylate cyclase, GGDEF domain ACPL_4821 PF03707 Bacterial signalling protein N terminal repeat ACPL_4822 PF00248 Aldo/keto reductase family ACPL_4824 PF01522 Polysaccharide deacetylase ACPL_4834 PF00731 AIR carboxylase ACPL_4836 PF01969 Protein of unknown function DUF111 ACPL_484 PF00270 DEAD/DEAH box helicase ACPL_484 PF00271 Helicase conserved C-terminal domain ACPL_484 PF09369 Domain of unknown function (DUF1998) ACPL_4843 PF02909 Tetracyclin repressor-like, C-terminal domain ACPL_4843 PF00440 Bacterial regulatory proteins, tetR family ACPL_4844 PF07690 Major Facilitator Superfamily ACPL_4847 PF00196 Bacterial regulatory proteins, luxR family ACPL_4848 PF01209 ubiE/COQ5 methyltransferase family ACPL_485 PF01740 STAS domain ACPL_4850 PF00457 Glycosyl hydrolases family 11 ACPL_4851 PF00457 Glycosyl hydrolases family 11 ACPL_4851 PF01522 Polysaccharide deacetylase ACPL_4852 PF00672 HAMP domain ACPL_4852 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_4852 PF00512 His Kinase A (phospho-acceptor) domain ACPL_4852 PF18698 Histidine kinase sensor domain ACPL_4852 PF00989 PAS fold ACPL_4865 PF00364 Biotin-requiring enzyme ACPL_4865 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ACPL_4865 PF02817 e3 binding domain ACPL_4866 PF02780 Transketolase, C-terminal domain ACPL_4866 PF02779 Transketolase, pyrimidine binding domain ACPL_4867 PF00676 Dehydrogenase E1 component ACPL_4868 PF01037 Lrp/AsnC ligand binding domain ACPL_487 PF03030 Inorganic H+ pyrophosphatase ACPL_4874 PF09348 Domain of unknown function (DUF1990) ACPL_4877 PF01212 Beta-eliminating lyase ACPL_4879 PF00563 EAL domain ACPL_4879 PF00990 Diguanylate cyclase, GGDEF domain ACPL_4879 PF03707 Bacterial signalling protein N terminal repeat ACPL_4886 PF02417 Chromate transporter ACPL_4887 PF00583 Acetyltransferase (GNAT) family ACPL_4890 PF07690 Major Facilitator Superfamily ACPL_4896 PF00082 Subtilase family ACPL_490 PF13368 Topoisomerase C-terminal repeat ACPL_490 PF01751 Toprim domain ACPL_490 PF01131 DNA topoisomerase ACPL_4902 PF00563 EAL domain ACPL_4902 PF00990 Diguanylate cyclase, GGDEF domain ACPL_4902 PF03707 Bacterial signalling protein N terminal repeat ACPL_4903 PF07724 AAA domain (Cdc48 subfamily) ACPL_4903 PF06689 ClpX C4-type zinc finger ACPL_4903 PF10431 C-terminal, D2-small domain, of ClpB protein ACPL_4904 PF02156 Glycosyl hydrolase family 26 ACPL_4907 PF01176 Translation initiation factor 1A / IF-1 ACPL_491 PF01565 FAD binding domain ACPL_491 PF04030 D-arabinono-1,4-lactone oxidase ACPL_4910 PF00487 Fatty acid desaturase ACPL_4912 PF01447 Thermolysin metallopeptidase, catalytic domain ACPL_4912 PF04389 Peptidase family M28 ACPL_4912 PF02868 Thermolysin metallopeptidase, alpha-helical domain ACPL_4913 PF17964 Bacterial Ig domain ACPL_4913 PF03734 L,D-transpeptidase catalytic domain ACPL_4916 PF04542 Sigma-70 region 2 ACPL_4916 PF08281 Sigma-70, region 4 ACPL_492 PF17925 Tetracyclin repressor-like, C-terminal domain ACPL_492 PF00440 Bacterial regulatory proteins, tetR family ACPL_4920 PF00685 Sulfotransferase domain ACPL_4925 PF00553 Cellulose binding domain ACPL_4925 PF01341 Glycosyl hydrolases family 6 ACPL_4927 PF00356 Bacterial regulatory proteins, lacI family ACPL_4935 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 ACPL_4935 PF00953 Glycosyl transferase family 4 ACPL_4936 PF01263 Aldose 1-epimerase ACPL_4937 PF00107 Zinc-binding dehydrogenase ACPL_4937 PF08240 Alcohol dehydrogenase GroES-like domain ACPL_494 PF02223 Thymidylate kinase ACPL_4941 PF00652 Ricin-type beta-trefoil lectin domain ACPL_4941 PF03664 Glycosyl hydrolase family 62 ACPL_4945 PF01757 Acyltransferase family ACPL_4948 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACPL_4948 PF00672 HAMP domain ACPL_495 PF00331 Glycosyl hydrolase family 10 ACPL_495 PF00553 Cellulose binding domain ACPL_4950 PF00266 Aminotransferase class-V ACPL_4952 PF01593 Flavin containing amine oxidoreductase ACPL_4954 PF00106 short chain dehydrogenase ACPL_4955 PF03466 LysR substrate binding domain ACPL_4955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACPL_4959 PF07690 Major Facilitator Superfamily ACPL_496 PF12169 DNA polymerase III subunits gamma and tau domain III ACPL_4960 PF18665 Tetracyclin repressor-like, C-terminal domain ACPL_4960 PF00440 Bacterial regulatory proteins, tetR family ACPL_4967 PF00356 Bacterial regulatory proteins, lacI family ACPL_4973 PF00728 Glycosyl hydrolase family 20, catalytic domain ACPL_4973 PF02838 Glycosyl hydrolase family 20, domain 2 ACPL_4975 PF03450 CO dehydrogenase flavoprotein C-terminal domain ACPL_4975 PF00941 FAD binding domain in molybdopterin dehydrogenase ACPL_4976 PF01906 Putative heavy-metal-binding ACPL_4977 PF01906 Putative heavy-metal-binding ACPL_4986 PF01613 Flavin reductase like domain ACPL_4987 PF00072 Response regulator receiver domain ACPL_4987 PF00196 Bacterial regulatory proteins, luxR family ACPL_4993 PF07690 Major Facilitator Superfamily ACPL_4995 PF05368 NmrA-like family ACPL_4999 PF00665 Integrase core domain ACPL_5010 PF00005 ABC transporter ACPL_5011 PF00005 ABC transporter ACPL_5017 PF00264 Common central domain of tyrosinase ACPL_5019 PF01095 Pectinesterase ACPL_502 PF04468 PSP1 C-terminal conserved region ACPL_5020 PF00544 Pectate lyase ACPL_5023 PF00069 Protein kinase domain ACPL_5024 PF00155 Aminotransferase class I and II ACPL_5025 PF00892 EamA-like transporter family ACPL_5026 PF07943 Penicillin-binding protein 5, C-terminal domain ACPL_5026 PF00768 D-alanyl-D-alanine carboxypeptidase ACPL_5028 PF00109 Beta-ketoacyl synthase, N-terminal domain ACPL_5028 PF02801 Beta-ketoacyl synthase, C-terminal domain ACPL_5032 PF00857 Isochorismatase family ACPL_5038 PF07728 AAA domain (dynein-related subfamily) ACPL_5038 PF08406 CbbQ/NirQ/NorQ C-terminal ACPL_5040 PF01580 FtsK/SpoIIIE family ACPL_5044 PF00990 Diguanylate cyclase, GGDEF domain ACPL_5044 PF00072 Response regulator receiver domain ACPL_5046 PF07728 AAA domain (dynein-related subfamily) ACPL_5047 PF05762 VWA domain containing CoxE-like protein ACPL_5050 PF01494 FAD binding domain ACPL_5054 PF00797 N-acetyltransferase ACPL_5057 PF08264 Anticodon-binding domain of tRNA ACPL_5057 PF00133 tRNA synthetases class I (I, L, M and V) ACPL_5063 PF00072 Response regulator receiver domain ACPL_5063 PF00486 Transcriptional regulatory protein, C terminal ACPL_5064 PF00672 HAMP domain ACPL_5064 PF00512 His Kinase A (phospho-acceptor) domain ACPL_5064 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_5068 PF00733 Asparagine synthase ACPL_5068 PF13537 Glutamine amidotransferase domain ACPL_5069 PF17755 UvrA DNA-binding domain ACPL_5069 PF17760 UvrA interaction domain ACPL_5069 PF00005 ABC transporter ACPL_507 PF00082 Subtilase family ACPL_5070 PF13411 MerR HTH family regulatory protein ACPL_5071 PF02577 Bifunctional nuclease ACPL_5072 PF00376 MerR family regulatory protein ACPL_5073 PF00498 FHA domain ACPL_5074 PF01597 Glycine cleavage H-protein ACPL_5076 PF06947 Protein of unknown function (DUF1290) ACPL_5079 PF04542 Sigma-70 region 2 ACPL_5079 PF12680 SnoaL-like domain ACPL_5079 PF08281 Sigma-70, region 4 ACPL_5081 PF12833 Helix-turn-helix domain ACPL_5081 PF14525 AraC-binding-like domain ACPL_5083 PF01022 Bacterial regulatory protein, arsR family ACPL_5085 PF01078 Magnesium chelatase, subunit ChlI ACPL_5085 PF17863 AAA lid domain ACPL_5086 PF02567 Phenazine biosynthesis-like protein ACPL_5087 PF13426 PAS domain ACPL_5087 PF00563 EAL domain ACPL_5087 PF00990 Diguanylate cyclase, GGDEF domain ACPL_5087 PF08448 PAS fold ACPL_5087 PF05231 MASE1 ACPL_5087 PF08447 PAS fold ACPL_5088 PF12848 ABC transporter ACPL_5088 PF16326 ABC transporter C-terminal domain ACPL_5088 PF00005 ABC transporter ACPL_5091 PF00128 Alpha amylase, catalytic domain ACPL_5091 PF00686 Starch binding domain ACPL_5092 PF02638 Glycosyl hydrolase-like 10 ACPL_5093 PF13439 Glycosyltransferase Family 4 ACPL_5093 PF00534 Glycosyl transferases group 1 ACPL_5094 PF00563 EAL domain ACPL_5094 PF00990 Diguanylate cyclase, GGDEF domain ACPL_5094 PF08448 PAS fold ACPL_5094 PF08447 PAS fold ACPL_5095 PF00483 Nucleotidyl transferase ACPL_5096 PF00563 EAL domain ACPL_5096 PF00990 Diguanylate cyclase, GGDEF domain ACPL_5096 PF03707 Bacterial signalling protein N terminal repeat ACPL_5098 PF00041 Fibronectin type III domain ACPL_5098 PF00553 Cellulose binding domain ACPL_5098 PF00704 Glycosyl hydrolases family 18 ACPL_510 PF07690 Major Facilitator Superfamily ACPL_5100 PF09297 NADH pyrophosphatase zinc ribbon domain ACPL_5100 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain ACPL_5100 PF00293 NUDIX domain ACPL_5101 PF14525 AraC-binding-like domain ACPL_5101 PF12833 Helix-turn-helix domain ACPL_5105 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading ACPL_5105 PF18416 N-acetylglucosamine binding protein domain 2 ACPL_5106 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ACPL_511 PF01494 FAD binding domain ACPL_5112 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ACPL_5112 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ACPL_5113 PF01740 STAS domain ACPL_5114 PF00480 ROK family ACPL_5117 PF02653 Branched-chain amino acid transport system / permease component ACPL_5118 PF00005 ABC transporter ACPL_5119 PF13407 Periplasmic binding protein domain ACPL_5120 PF02610 L-arabinose isomerase ACPL_5120 PF11762 L-arabinose isomerase C-terminal domain ACPL_5121 PF00356 Bacterial regulatory proteins, lacI family ACPL_5123 PF01243 Pyridoxamine 5'-phosphate oxidase ACPL_5125 PF13439 Glycosyltransferase Family 4 ACPL_5125 PF00534 Glycosyl transferases group 1 ACPL_5128 PF00990 Diguanylate cyclase, GGDEF domain ACPL_5128 PF17158 Membrane-associated sensor, integral membrane domain ACPL_5129 PF00892 EamA-like transporter family ACPL_5130 PF00005 ABC transporter ACPL_5130 PF02687 FtsX-like permease family ACPL_5130 PF12704 MacB-like periplasmic core domain ACPL_5131 PF02687 FtsX-like permease family ACPL_5131 PF00005 ABC transporter ACPL_5131 PF12704 MacB-like periplasmic core domain ACPL_5137 PF01739 CheR methyltransferase, SAM binding domain ACPL_5137 PF03705 CheR methyltransferase, all-alpha domain ACPL_5139 PF17200 Single Cache domain 2 ACPL_5139 PF00672 HAMP domain ACPL_5139 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACPL_5140 PF01584 CheW-like domain ACPL_5140 PF07194 P2 response regulator binding domain ACPL_5140 PF01627 Hpt domain ACPL_5140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_5140 PF02895 Signal transducing histidine kinase, homodimeric domain ACPL_5141 PF01339 CheB methylesterase ACPL_5141 PF00072 Response regulator receiver domain ACPL_5142 PF00072 Response regulator receiver domain ACPL_5142 PF00990 Diguanylate cyclase, GGDEF domain ACPL_5143 PF12704 MacB-like periplasmic core domain ACPL_5143 PF00005 ABC transporter ACPL_5143 PF02687 FtsX-like permease family ACPL_5144 PF12704 MacB-like periplasmic core domain ACPL_5144 PF02687 FtsX-like permease family ACPL_5144 PF00005 ABC transporter ACPL_5145 PF07730 Histidine kinase ACPL_5145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_5145 PF05384 Sensor protein DegS ACPL_5146 PF00196 Bacterial regulatory proteins, luxR family ACPL_5146 PF00072 Response regulator receiver domain ACPL_5148 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACPL_5148 PF03466 LysR substrate binding domain ACPL_5149 PF00892 EamA-like transporter family ACPL_5152 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading ACPL_5153 PF02719 Polysaccharide biosynthesis protein ACPL_5157 PF00463 Isocitrate lyase family ACPL_5160 PF01329 Pterin 4 alpha carbinolamine dehydratase ACPL_5164 PF16385 Domain of unknown function ACPL_5164 PF00884 Sulfatase ACPL_5166 PF01569 PAP2 superfamily ACPL_5167 PF02525 Flavodoxin-like fold ACPL_5170 PF18158 Adaptive response protein AidB N-terminal domain ACPL_5170 PF02770 Acyl-CoA dehydrogenase, middle domain ACPL_5170 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACPL_5171 PF00004 ATPase family associated with various cellular activities (AAA) ACPL_5171 PF17862 AAA+ lid domain ACPL_5171 PF06480 FtsH Extracellular ACPL_5171 PF01434 Peptidase family M41 ACPL_5172 PF02225 PA domain ACPL_5172 PF04389 Peptidase family M28 ACPL_5173 PF01209 ubiE/COQ5 methyltransferase family ACPL_5177 PF00150 Cellulase (glycosyl hydrolase family 5) ACPL_5177 PF00553 Cellulose binding domain ACPL_5184 PF00440 Bacterial regulatory proteins, tetR family ACPL_5184 PF16859 Tetracyclin repressor-like, C-terminal domain ACPL_5187 PF01032 FecCD transport family ACPL_5188 PF01032 FecCD transport family ACPL_5189 PF00005 ABC transporter ACPL_519 PF01068 ATP dependent DNA ligase domain ACPL_519 PF04679 ATP dependent DNA ligase C terminal region ACPL_519 PF13298 DNA polymerase Ligase (LigD) ACPL_5191 PF01266 FAD dependent oxidoreductase ACPL_5192 PF00672 HAMP domain ACPL_5192 PF00512 His Kinase A (phospho-acceptor) domain ACPL_5192 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_5193 PF00486 Transcriptional regulatory protein, C terminal ACPL_5193 PF00072 Response regulator receiver domain ACPL_5194 PF00890 FAD binding domain ACPL_5194 PF04205 FMN-binding domain ACPL_5194 PF03358 NADPH-dependent FMN reductase ACPL_5195 PF00042 Globin ACPL_5195 PF00970 Oxidoreductase FAD-binding domain ACPL_5195 PF00175 Oxidoreductase NAD-binding domain ACPL_5197 PF00753 Metallo-beta-lactamase superfamily ACPL_5197 PF16123 Hydroxyacylglutathione hydrolase C-terminus ACPL_520 PF13298 DNA polymerase Ligase (LigD) ACPL_520 PF04679 ATP dependent DNA ligase C terminal region ACPL_520 PF01068 ATP dependent DNA ligase domain ACPL_5203 PF00196 Bacterial regulatory proteins, luxR family ACPL_5203 PF00563 EAL domain ACPL_5204 PF00501 AMP-binding enzyme ACPL_5204 PF13193 AMP-binding enzyme C-terminal domain ACPL_5206 PF00497 Bacterial extracellular solute-binding proteins, family 3 ACPL_5208 PF00069 Protein kinase domain ACPL_5208 PF16919 Protein kinase G rubredoxin domain ACPL_5208 PF16918 Protein kinase G tetratricopeptide repeat ACPL_521 PF02735 Ku70/Ku80 beta-barrel domain ACPL_5214 PF00459 Inositol monophosphatase family ACPL_5216 PF00501 AMP-binding enzyme ACPL_5219 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ACPL_5219 PF02806 Alpha amylase, C-terminal all-beta domain ACPL_5219 PF00128 Alpha amylase, catalytic domain ACPL_522 PF00293 NUDIX domain ACPL_5222 PF00270 DEAD/DEAH box helicase ACPL_5222 PF08148 DSHCT (NUC185) domain ACPL_5222 PF00271 Helicase conserved C-terminal domain ACPL_5223 PF13419 Haloacid dehalogenase-like hydrolase ACPL_5226 PF00902 Sec-independent protein translocase protein (TatC) ACPL_5227 PF02416 mttA/Hcf106 family ACPL_5229 PF13280 WYL domain ACPL_5230 PF13280 WYL domain ACPL_5231 PF16916 Dimerisation domain of Zinc Transporter ACPL_5231 PF01545 Cation efflux family ACPL_5238 PF00990 Diguanylate cyclase, GGDEF domain ACPL_5238 PF05230 MASE2 domain ACPL_5239 PF01596 O-methyltransferase ACPL_5241 PF03136 Pup-ligase protein ACPL_5242 PF00227 Proteasome subunit ACPL_5243 PF00227 Proteasome subunit ACPL_5244 PF05639 Pup-like protein ACPL_5245 PF03136 Pup-ligase protein ACPL_5247 PF00004 ATPase family associated with various cellular activities (AAA) ACPL_5247 PF17758 Proteasomal ATPase OB N-terminal domain ACPL_5247 PF16450 Proteasomal ATPase OB C-terminal domain ACPL_5250 PF08704 tRNA methyltransferase complex GCD14 subunit ACPL_5251 PF02163 Peptidase family M50 ACPL_5251 PF00571 CBS domain ACPL_5253 PF00072 Response regulator receiver domain ACPL_5253 PF00196 Bacterial regulatory proteins, luxR family ACPL_5255 PF02687 FtsX-like permease family ACPL_5255 PF12704 MacB-like periplasmic core domain ACPL_5255 PF00005 ABC transporter ACPL_5256 PF02687 FtsX-like permease family ACPL_5256 PF12704 MacB-like periplasmic core domain ACPL_5256 PF00005 ABC transporter ACPL_526 PF00271 Helicase conserved C-terminal domain ACPL_526 PF04851 Type III restriction enzyme, res subunit ACPL_5264 PF00072 Response regulator receiver domain ACPL_5264 PF00196 Bacterial regulatory proteins, luxR family ACPL_5266 PF01406 tRNA synthetases class I (C) catalytic domain ACPL_5270 PF00296 Luciferase-like monooxygenase ACPL_5271 PF00248 Aldo/keto reductase family ACPL_5272 PF07730 Histidine kinase ACPL_5273 PF00196 Bacterial regulatory proteins, luxR family ACPL_5273 PF00072 Response regulator receiver domain ACPL_5276 PF07687 Peptidase dimerisation domain ACPL_5276 PF01546 Peptidase family M20/M25/M40 ACPL_5278 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACPL_5278 PF03466 LysR substrate binding domain ACPL_5282 PF17871 AAA lid domain ACPL_5282 PF07724 AAA domain (Cdc48 subfamily) ACPL_5282 PF10431 C-terminal, D2-small domain, of ClpB protein ACPL_5282 PF00004 ATPase family associated with various cellular activities (AAA) ACPL_5282 PF02861 Clp amino terminal domain, pathogenicity island component ACPL_5286 PF12538 DNA transporter ACPL_5286 PF01580 FtsK/SpoIIIE family ACPL_529 PF00313 'Cold-shock' DNA-binding domain ACPL_5291 PF01258 Prokaryotic dksA/traR C4-type zinc finger ACPL_5293 PF00072 Response regulator receiver domain ACPL_5293 PF00486 Transcriptional regulatory protein, C terminal ACPL_5294 PF07516 SecA Wing and Scaffold domain ACPL_5294 PF07517 SecA DEAD-like domain ACPL_5294 PF01043 SecA preprotein cross-linking domain ACPL_530 PF02621 Menaquinone biosynthesis ACPL_5302 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ACPL_5302 PF07685 CobB/CobQ-like glutamine amidotransferase domain ACPL_5303 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP ACPL_5304 PF13519 von Willebrand factor type A domain ACPL_5304 PF07728 AAA domain (dynein-related subfamily) ACPL_5304 PF17863 AAA lid domain ACPL_5307 PF01022 Bacterial regulatory protein, arsR family ACPL_5308 PF00285 Citrate synthase, C-terminal domain ACPL_5310 PF08447 PAS fold ACPL_5310 PF00990 Diguanylate cyclase, GGDEF domain ACPL_5310 PF00563 EAL domain ACPL_5310 PF08448 PAS fold ACPL_5312 PF03372 Endonuclease/Exonuclease/phosphatase family ACPL_5318 PF11898 Domain of unknown function (DUF3418) ACPL_5318 PF04408 Helicase associated domain (HA2) ACPL_5318 PF00271 Helicase conserved C-terminal domain ACPL_5318 PF00270 DEAD/DEAH box helicase ACPL_5318 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold ACPL_5319 PF03816 Cell envelope-related transcriptional attenuator domain ACPL_5320 PF00486 Transcriptional regulatory protein, C terminal ACPL_5320 PF00072 Response regulator receiver domain ACPL_5321 PF01590 GAF domain ACPL_5321 PF08446 PAS fold ACPL_5321 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_5321 PF00512 His Kinase A (phospho-acceptor) domain ACPL_5321 PF00360 Phytochrome region ACPL_5322 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ACPL_5322 PF10135 Rod binding protein ACPL_5325 PF04545 Sigma-70, region 4 ACPL_5325 PF04542 Sigma-70 region 2 ACPL_5325 PF04539 Sigma-70 region 3 ACPL_5326 PF00480 ROK family ACPL_5329 PF00128 Alpha amylase, catalytic domain ACPL_5329 PF11896 Domain of unknown function (DUF3416) ACPL_533 PF00232 Glycosyl hydrolase family 1 ACPL_5330 PF00128 Alpha amylase, catalytic domain ACPL_5330 PF16657 Maltogenic Amylase, C-terminal domain ACPL_5331 PF18085 Maltokinase N-terminal cap domain ACPL_5332 PF02806 Alpha amylase, C-terminal all-beta domain ACPL_5332 PF00128 Alpha amylase, catalytic domain ACPL_5332 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ACPL_5334 PF13302 Acetyltransferase (GNAT) domain ACPL_5336 PF00575 S1 RNA binding domain ACPL_5336 PF17674 HHH domain ACPL_5336 PF09371 Tex-like protein N-terminal domain ACPL_5336 PF16921 Tex protein YqgF-like domain ACPL_5337 PF00400 WD domain, G-beta repeat ACPL_5337 PF00069 Protein kinase domain ACPL_5340 PF00578 AhpC/TSA family ACPL_5341 PF10531 SLBB domain ACPL_5341 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ACPL_5341 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ACPL_5345 PF00553 Cellulose binding domain ACPL_5345 PF00041 Fibronectin type III domain ACPL_5345 PF01341 Glycosyl hydrolases family 6 ACPL_5348 PF08448 PAS fold ACPL_5348 PF00990 Diguanylate cyclase, GGDEF domain ACPL_5348 PF08447 PAS fold ACPL_5348 PF00563 EAL domain ACPL_5350 PF13419 Haloacid dehalogenase-like hydrolase ACPL_5351 PF02091 Glycyl-tRNA synthetase alpha subunit ACPL_5351 PF02092 Glycyl-tRNA synthetase beta subunit ACPL_5353 PF00196 Bacterial regulatory proteins, luxR family ACPL_5353 PF00072 Response regulator receiver domain ACPL_5354 PF07730 Histidine kinase ACPL_5355 PF03009 Glycerophosphoryl diester phosphodiesterase family ACPL_5357 PF01384 Phosphate transporter family ACPL_536 PF01048 Phosphorylase superfamily ACPL_5361 PF03707 Bacterial signalling protein N terminal repeat ACPL_5361 PF00990 Diguanylate cyclase, GGDEF domain ACPL_5361 PF00563 EAL domain ACPL_5362 PF13426 PAS domain ACPL_5362 PF08447 PAS fold ACPL_5362 PF08448 PAS fold ACPL_5362 PF05231 MASE1 ACPL_5362 PF00563 EAL domain ACPL_5362 PF00990 Diguanylate cyclase, GGDEF domain ACPL_5366 PF00356 Bacterial regulatory proteins, lacI family ACPL_5367 PF01965 DJ-1/PfpI family ACPL_5368 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ACPL_5368 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ACPL_5369 PF00356 Bacterial regulatory proteins, lacI family ACPL_537 PF07690 Major Facilitator Superfamily ACPL_5377 PF00544 Pectate lyase ACPL_5379 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ACPL_5379 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ACPL_538 PF11228 Protein of unknown function (DUF3027) ACPL_5380 PF08125 Mannitol dehydrogenase C-terminal domain ACPL_5380 PF01232 Mannitol dehydrogenase Rossmann domain ACPL_5381 PF02614 Glucuronate isomerase ACPL_5382 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ACPL_5382 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ACPL_5383 PF00356 Bacterial regulatory proteins, lacI family ACPL_5385 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_5386 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_5388 PF01037 Lrp/AsnC ligand binding domain ACPL_5389 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ACPL_5389 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ACPL_539 PF07690 Major Facilitator Superfamily ACPL_5392 PF00196 Bacterial regulatory proteins, luxR family ACPL_5392 PF00072 Response regulator receiver domain ACPL_5395 PF13556 PucR C-terminal helix-turn-helix domain ACPL_5395 PF17853 GGDEF-like domain ACPL_5396 PF00175 Oxidoreductase NAD-binding domain ACPL_5396 PF00111 2Fe-2S iron-sulfur cluster binding domain ACPL_5396 PF00970 Oxidoreductase FAD-binding domain ACPL_5397 PF00487 Fatty acid desaturase ACPL_5403 PF02056 Family 4 glycosyl hydrolase ACPL_5403 PF11975 Family 4 glycosyl hydrolase C-terminal domain ACPL_5404 PF01547 Bacterial extracellular solute-binding protein ACPL_5405 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_5406 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_5407 PF00294 pfkB family carbohydrate kinase ACPL_5415 PF01794 Ferric reductase like transmembrane component ACPL_5417 PF08281 Sigma-70, region 4 ACPL_5417 PF04542 Sigma-70 region 2 ACPL_542 PF00860 Permease family ACPL_5420 PF03976 Polyphosphate kinase 2 (PPK2) ACPL_5423 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain ACPL_5423 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain ACPL_5424 PF01301 Glycosyl hydrolases family 35 ACPL_5425 PF01547 Bacterial extracellular solute-binding protein ACPL_5426 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_5427 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_5428 PF00356 Bacterial regulatory proteins, lacI family ACPL_5429 PF07745 Glycosyl hydrolase family 53 ACPL_543 PF01047 MarR family ACPL_5430 PF07745 Glycosyl hydrolase family 53 ACPL_5433 PF03176 MMPL family ACPL_544 PF05977 Transmembrane secretion effector ACPL_5441 PF11762 L-arabinose isomerase C-terminal domain ACPL_5441 PF02610 L-arabinose isomerase ACPL_5442 PF02653 Branched-chain amino acid transport system / permease component ACPL_5443 PF02653 Branched-chain amino acid transport system / permease component ACPL_5444 PF00005 ABC transporter ACPL_5445 PF13407 Periplasmic binding protein domain ACPL_5446 PF00356 Bacterial regulatory proteins, lacI family ACPL_5448 PF00596 Class II Aldolase and Adducin N-terminal domain ACPL_5449 PF00753 Metallo-beta-lactamase superfamily ACPL_5450 PF13195 Protein of unknown function (DUF4011) ACPL_5450 PF13087 AAA domain ACPL_5450 PF13086 AAA domain ACPL_5450 PF13195 Protein of unknown function (DUF4011) ACPL_5450 PF13086 AAA domain ACPL_5450 PF13087 AAA domain ACPL_5452 PF16884 N-terminal domain of oxidoreductase ACPL_5452 PF00107 Zinc-binding dehydrogenase ACPL_5453 PF00440 Bacterial regulatory proteins, tetR family ACPL_5454 PF02254 TrkA-N domain ACPL_5454 PF02080 TrkA-C domain ACPL_5457 PF00360 Phytochrome region ACPL_5457 PF00512 His Kinase A (phospho-acceptor) domain ACPL_5457 PF01590 GAF domain ACPL_5457 PF08446 PAS fold ACPL_5457 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_5459 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACPL_5459 PF00672 HAMP domain ACPL_5459 PF02743 Cache domain ACPL_5462 PF00005 ABC transporter ACPL_5463 PF00156 Phosphoribosyl transferase domain ACPL_5463 PF01738 Dienelactone hydrolase family ACPL_5464 PF00156 Phosphoribosyl transferase domain ACPL_5464 PF01738 Dienelactone hydrolase family ACPL_5472 PF12951 Passenger-associated-transport-repeat ACPL_5474 PF03466 LysR substrate binding domain ACPL_5474 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACPL_5475 PF00171 Aldehyde dehydrogenase family ACPL_5478 PF13419 Haloacid dehalogenase-like hydrolase ACPL_5479 PF03737 Aldolase/RraA ACPL_548 PF00266 Aminotransferase class-V ACPL_5481 PF00171 Aldehyde dehydrogenase family ACPL_5484 PF05448 Acetyl xylan esterase (AXE1) ACPL_5485 PF14490 Helix-hairpin-helix containing domain ACPL_5485 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain ACPL_5485 PF13538 UvrD-like helicase C-terminal domain ACPL_5488 PF17200 Single Cache domain 2 ACPL_5488 PF00672 HAMP domain ACPL_5488 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACPL_5489 PF02734 DAK2 domain ACPL_549 PF00285 Citrate synthase, C-terminal domain ACPL_5490 PF02733 Dak1 domain ACPL_5491 PF03610 PTS system fructose IIA component ACPL_5491 PF05524 PEP-utilising enzyme, N-terminal ACPL_5491 PF00391 PEP-utilising enzyme, mobile domain ACPL_5491 PF00381 PTS HPr component phosphorylation site ACPL_5494 PF00331 Glycosyl hydrolase family 10 ACPL_5494 PF00652 Ricin-type beta-trefoil lectin domain ACPL_5496 PF05360 yiaA/B two helix domain ACPL_5497 PF02803 Thiolase, C-terminal domain ACPL_5497 PF00108 Thiolase, N-terminal domain ACPL_550 PF01243 Pyridoxamine 5'-phosphate oxidase ACPL_550 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ACPL_5502 PF08990 Erythronolide synthase docking ACPL_5502 PF09277 Erythronolide synthase, docking ACPL_5502 PF14765 Polyketide synthase dehydratase ACPL_5502 PF08240 Alcohol dehydrogenase GroES-like domain ACPL_5502 PF00698 Acyl transferase domain ACPL_5502 PF16197 Ketoacyl-synthetase C-terminal extension ACPL_5502 PF00550 Phosphopantetheine attachment site ACPL_5502 PF00109 Beta-ketoacyl synthase, N-terminal domain ACPL_5502 PF02801 Beta-ketoacyl synthase, C-terminal domain ACPL_5502 PF08659 KR domain ACPL_5503 PF00440 Bacterial regulatory proteins, tetR family ACPL_5507 PF00501 AMP-binding enzyme ACPL_5507 PF13193 AMP-binding enzyme C-terminal domain ACPL_5508 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACPL_5508 PF02770 Acyl-CoA dehydrogenase, middle domain ACPL_5508 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACPL_551 PF07690 Major Facilitator Superfamily ACPL_5512 PF13087 AAA domain ACPL_5512 PF13195 Protein of unknown function (DUF4011) ACPL_5512 PF13087 AAA domain ACPL_5512 PF13086 AAA domain ACPL_5512 PF13195 Protein of unknown function (DUF4011) ACPL_5512 PF13086 AAA domain ACPL_5513 PF13847 Methyltransferase domain ACPL_5514 PF01381 Helix-turn-helix ACPL_5515 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ACPL_5516 PF02702 Osmosensitive K+ channel His kinase sensor domain ACPL_5516 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_5516 PF13493 Domain of unknown function (DUF4118) ACPL_5517 PF00378 Enoyl-CoA hydratase/isomerase ACPL_5518 PF06964 Alpha-L-arabinofuranosidase C-terminal domain ACPL_5518 PF02018 Carbohydrate binding domain ACPL_5519 PF04616 Glycosyl hydrolases family 43 ACPL_5519 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain ACPL_552 PF01263 Aldose 1-epimerase ACPL_5520 PF13426 PAS domain ACPL_5520 PF00990 Diguanylate cyclase, GGDEF domain ACPL_5520 PF00563 EAL domain ACPL_5521 PF00563 EAL domain ACPL_5521 PF00990 Diguanylate cyclase, GGDEF domain ACPL_5521 PF03707 Bacterial signalling protein N terminal repeat ACPL_5523 PF00962 Adenosine/AMP deaminase ACPL_5524 PF00743 Flavin-binding monooxygenase-like ACPL_5525 PF05199 GMC oxidoreductase ACPL_5526 PF12697 Alpha/beta hydrolase family ACPL_5529 PF02146 Sir2 family ACPL_5532 PF00990 Diguanylate cyclase, GGDEF domain ACPL_5532 PF00563 EAL domain ACPL_5532 PF03707 Bacterial signalling protein N terminal repeat ACPL_5533 PF07690 Major Facilitator Superfamily ACPL_5534 PF16859 Tetracyclin repressor-like, C-terminal domain ACPL_5534 PF00440 Bacterial regulatory proteins, tetR family ACPL_5538 PF00912 Transglycosylase ACPL_5538 PF00905 Penicillin binding protein transpeptidase domain ACPL_5539 PF13086 AAA domain ACPL_5539 PF13087 AAA domain ACPL_5539 PF13195 Protein of unknown function (DUF4011) ACPL_5539 PF13086 AAA domain ACPL_5539 PF13087 AAA domain ACPL_5539 PF13195 Protein of unknown function (DUF4011) ACPL_5540 PF02719 Polysaccharide biosynthesis protein ACPL_5541 PF02706 Chain length determinant protein ACPL_5541 PF13614 AAA domain ACPL_5541 PF13807 G-rich domain on putative tyrosine kinase ACPL_5545 PF02397 Bacterial sugar transferase ACPL_5546 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ACPL_555 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACPL_555 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACPL_555 PF02770 Acyl-CoA dehydrogenase, middle domain ACPL_5550 PF00717 Peptidase S24-like ACPL_5550 PF01726 LexA DNA binding domain ACPL_5555 PF00465 Iron-containing alcohol dehydrogenase ACPL_5557 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACPL_5558 PF00265 Thymidine kinase ACPL_5560 PF00005 ABC transporter ACPL_5560 PF00664 ABC transporter transmembrane region ACPL_5561 PF00664 ABC transporter transmembrane region ACPL_5561 PF00005 ABC transporter ACPL_5566 PF01494 FAD binding domain ACPL_5570 PF06736 Protein of unknown function (DUF1211) ACPL_5574 PF00005 ABC transporter ACPL_5574 PF13732 Domain of unknown function (DUF4162) ACPL_5576 PF00196 Bacterial regulatory proteins, luxR family ACPL_5577 PF00553 Cellulose binding domain ACPL_5577 PF01341 Glycosyl hydrolases family 6 ACPL_5578 PF00990 Diguanylate cyclase, GGDEF domain ACPL_5578 PF08448 PAS fold ACPL_558 PF17912 MalK OB fold domain ACPL_558 PF00005 ABC transporter ACPL_5582 PF08532 Beta-galactosidase trimerisation domain ACPL_5582 PF02449 Beta-galactosidase ACPL_5582 PF08533 Beta-galactosidase C-terminal domain ACPL_5585 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_5586 PF00356 Bacterial regulatory proteins, lacI family ACPL_5589 PF03055 Retinal pigment epithelial membrane protein ACPL_5596 PF00106 short chain dehydrogenase ACPL_5597 PF00440 Bacterial regulatory proteins, tetR family ACPL_5597 PF17754 MftR C-terminal domain ACPL_5599 PF00403 Heavy-metal-associated domain ACPL_560 PF13419 Haloacid dehalogenase-like hydrolase ACPL_5600 PF00009 Elongation factor Tu GTP binding domain ACPL_5600 PF03144 Elongation factor Tu domain 2 ACPL_5600 PF03143 Elongation factor Tu C-terminal domain ACPL_5609 PF00005 ABC transporter ACPL_5609 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ACPL_561 PF03632 Glycosyl hydrolase family 65 central catalytic domain ACPL_561 PF03636 Glycosyl hydrolase family 65, N-terminal domain ACPL_561 PF03633 Glycosyl hydrolase family 65, C-terminal domain ACPL_5610 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_5611 PF12911 N-terminal TM domain of oligopeptide transport permease C ACPL_5611 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_5612 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ACPL_5615 PF11606 Family 31 carbohydrate binding protein ACPL_5619 PF04205 FMN-binding domain ACPL_5619 PF00890 FAD binding domain ACPL_5621 PF00128 Alpha amylase, catalytic domain ACPL_5621 PF02806 Alpha amylase, C-terminal all-beta domain ACPL_5621 PF00686 Starch binding domain ACPL_5622 PF13472 GDSL-like Lipase/Acylhydrolase family ACPL_5624 PF01209 ubiE/COQ5 methyltransferase family ACPL_5625 PF01266 FAD dependent oxidoreductase ACPL_5625 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ACPL_5626 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ACPL_5626 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ACPL_5627 PF00230 Major intrinsic protein ACPL_5628 PF01614 Bacterial transcriptional regulator ACPL_5628 PF09339 IclR helix-turn-helix domain ACPL_5629 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ACPL_5629 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ACPL_5637 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ACPL_5638 PF00534 Glycosyl transferases group 1 ACPL_5638 PF13439 Glycosyltransferase Family 4 ACPL_5639 PF02706 Chain length determinant protein ACPL_5639 PF13807 G-rich domain on putative tyrosine kinase ACPL_5639 PF13614 AAA domain ACPL_564 PF00005 ABC transporter ACPL_564 PF01476 LysM domain ACPL_5644 PF01494 FAD binding domain ACPL_5645 PF00563 EAL domain ACPL_5645 PF00990 Diguanylate cyclase, GGDEF domain ACPL_5645 PF03707 Bacterial signalling protein N terminal repeat ACPL_5650 PF00583 Acetyltransferase (GNAT) family ACPL_5656 PF02397 Bacterial sugar transferase ACPL_5657 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ACPL_5657 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ACPL_5657 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ACPL_5658 PF02719 Polysaccharide biosynthesis protein ACPL_566 PF00440 Bacterial regulatory proteins, tetR family ACPL_566 PF16859 Tetracyclin repressor-like, C-terminal domain ACPL_5661 PF00196 Bacterial regulatory proteins, luxR family ACPL_5661 PF00072 Response regulator receiver domain ACPL_5662 PF07690 Major Facilitator Superfamily ACPL_5664 PF03144 Elongation factor Tu domain 2 ACPL_5664 PF00009 Elongation factor Tu GTP binding domain ACPL_5664 PF03764 Elongation factor G, domain IV ACPL_5664 PF14492 Elongation Factor G, domain II ACPL_5664 PF00679 Elongation factor G C-terminus ACPL_5666 PF07730 Histidine kinase ACPL_5667 PF00072 Response regulator receiver domain ACPL_5667 PF00196 Bacterial regulatory proteins, luxR family ACPL_5669 PF00232 Glycosyl hydrolase family 1 ACPL_5670 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_5671 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_5673 PF00356 Bacterial regulatory proteins, lacI family ACPL_5675 PF07690 Major Facilitator Superfamily ACPL_5676 PF00440 Bacterial regulatory proteins, tetR family ACPL_5678 PF04116 Fatty acid hydroxylase superfamily ACPL_5680 PF03707 Bacterial signalling protein N terminal repeat ACPL_5680 PF00563 EAL domain ACPL_5680 PF00990 Diguanylate cyclase, GGDEF domain ACPL_5680 PF13188 PAS domain ACPL_5681 PF00005 ABC transporter ACPL_5681 PF13732 Domain of unknown function (DUF4162) ACPL_5682 PF01061 ABC-2 type transporter ACPL_5683 PF00196 Bacterial regulatory proteins, luxR family ACPL_5685 PF04185 Phosphoesterase family ACPL_5685 PF05506 Domain of unknown function (DUF756) ACPL_5692 PF00664 ABC transporter transmembrane region ACPL_5692 PF00005 ABC transporter ACPL_5693 PF00005 ABC transporter ACPL_5693 PF00664 ABC transporter transmembrane region ACPL_5696 PF00072 Response regulator receiver domain ACPL_5696 PF00486 Transcriptional regulatory protein, C terminal ACPL_5697 PF00512 His Kinase A (phospho-acceptor) domain ACPL_5697 PF00672 HAMP domain ACPL_5697 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_5700 PF00196 Bacterial regulatory proteins, luxR family ACPL_5700 PF00072 Response regulator receiver domain ACPL_5703 PF00664 ABC transporter transmembrane region ACPL_5703 PF00005 ABC transporter ACPL_5704 PF01494 FAD binding domain ACPL_5706 PF00440 Bacterial regulatory proteins, tetR family ACPL_5706 PF13977 BetI-type transcriptional repressor, C-terminal ACPL_5709 PF08310 LGFP repeat ACPL_5709 PF00756 Putative esterase ACPL_571 PF07690 Major Facilitator Superfamily ACPL_5710 PF00069 Protein kinase domain ACPL_5712 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region ACPL_5712 PF07676 WD40-like Beta Propeller Repeat ACPL_5712 PF00326 Prolyl oligopeptidase family ACPL_5719 PF01095 Pectinesterase ACPL_572 PF00440 Bacterial regulatory proteins, tetR family ACPL_572 PF02909 Tetracyclin repressor-like, C-terminal domain ACPL_5735 PF04075 F420H(2)-dependent quinone reductase ACPL_5736 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ACPL_5736 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ACPL_5737 PF13193 AMP-binding enzyme C-terminal domain ACPL_5737 PF00501 AMP-binding enzyme ACPL_5738 PF00378 Enoyl-CoA hydratase/isomerase ACPL_5739 PF00440 Bacterial regulatory proteins, tetR family ACPL_5745 PF00009 Elongation factor Tu GTP binding domain ACPL_5745 PF09105 Elongation factor SelB, winged helix ACPL_5745 PF03144 Elongation factor Tu domain 2 ACPL_5745 PF09106 Elongation factor SelB, winged helix ACPL_5745 PF09107 Elongation factor SelB, winged helix ACPL_5745 PF03144 Elongation factor Tu domain 2 ACPL_5745 PF09105 Elongation factor SelB, winged helix ACPL_5745 PF09107 Elongation factor SelB, winged helix ACPL_5745 PF00009 Elongation factor Tu GTP binding domain ACPL_5745 PF09106 Elongation factor SelB, winged helix ACPL_5746 PF03841 L-seryl-tRNA selenium transferase ACPL_5746 PF12390 Selenocysteine synthase N terminal ACPL_5750 PF02769 AIR synthase related protein, C-terminal domain ACPL_5750 PF00586 AIR synthase related protein, N-terminal domain ACPL_5753 PF12800 4Fe-4S binding domain ACPL_5753 PF09163 Formate dehydrogenase N, transmembrane ACPL_5753 PF13247 4Fe-4S dicluster domain ACPL_5754 PF00384 Molybdopterin oxidoreductase ACPL_5754 PF01568 Molydopterin dinucleotide binding domain ACPL_5754 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ACPL_5755 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ACPL_5755 PF00384 Molybdopterin oxidoreductase ACPL_5755 PF01568 Molydopterin dinucleotide binding domain ACPL_576 PF04545 Sigma-70, region 4 ACPL_576 PF04542 Sigma-70 region 2 ACPL_5760 PF13018 Extended Signal Peptide of Type V secretion system ACPL_5760 PF05594 Haemagluttinin repeat ACPL_5760 PF13332 Hemagglutinin repeat ACPL_5760 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain ACPL_5760 PF05860 haemagglutination activity domain ACPL_5762 PF00271 Helicase conserved C-terminal domain ACPL_5762 PF00270 DEAD/DEAH box helicase ACPL_5762 PF03880 DbpA RNA binding domain ACPL_5768 PF00854 POT family ACPL_5784 PF02151 UvrB/uvrC motif ACPL_5784 PF08459 UvrC Helix-hairpin-helix N-terminal ACPL_5784 PF01541 GIY-YIG catalytic domain ACPL_579 PF07690 Major Facilitator Superfamily ACPL_580 PF00486 Transcriptional regulatory protein, C terminal ACPL_580 PF00072 Response regulator receiver domain ACPL_5803 PF00436 Single-strand binding protein family ACPL_581 PF00107 Zinc-binding dehydrogenase ACPL_581 PF08240 Alcohol dehydrogenase GroES-like domain ACPL_582 PF00672 HAMP domain ACPL_582 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_582 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term ACPL_582 PF07730 Histidine kinase ACPL_583 PF00196 Bacterial regulatory proteins, luxR family ACPL_583 PF00072 Response regulator receiver domain ACPL_5830 PF00772 DnaB-like helicase N terminal domain ACPL_5830 PF03796 DnaB-like helicase C terminal domain ACPL_5831 PF00665 Integrase core domain ACPL_5832 PF03796 DnaB-like helicase C terminal domain ACPL_5832 PF00772 DnaB-like helicase N terminal domain ACPL_5836 PF12729 Four helix bundle sensory module for signal transduction ACPL_5836 PF00672 HAMP domain ACPL_5836 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACPL_5838 PF01740 STAS domain ACPL_584 PF03176 MMPL family ACPL_5843 PF04261 Dyp-type peroxidase family ACPL_5845 PF01183 Glycosyl hydrolases family 25 ACPL_585 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ACPL_586 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ACPL_5863 PF02575 YbaB/EbfC DNA-binding family ACPL_5869 PF13546 DDE superfamily endonuclease ACPL_587 PF03707 Bacterial signalling protein N terminal repeat ACPL_587 PF00990 Diguanylate cyclase, GGDEF domain ACPL_587 PF00563 EAL domain ACPL_587 PF13188 PAS domain ACPL_5873 PF01636 Phosphotransferase enzyme family ACPL_589 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ACPL_589 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACPL_5893 PF00437 Type II/IV secretion system protein ACPL_5908 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACPL_5908 PF16591 Helical bimodular sensor domain ACPL_5908 PF00672 HAMP domain ACPL_5909 PF08360 QacR-like protein, C-terminal region ACPL_5909 PF00440 Bacterial regulatory proteins, tetR family ACPL_5910 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ACPL_5921 PF04679 ATP dependent DNA ligase C terminal region ACPL_5921 PF01068 ATP dependent DNA ligase domain ACPL_5928 PF13361 UvrD-like helicase C-terminal domain ACPL_5928 PF00570 HRDC domain ACPL_5928 PF00580 UvrD/REP helicase N-terminal domain ACPL_5938 PF03796 DnaB-like helicase C terminal domain ACPL_594 PF00561 alpha/beta hydrolase fold ACPL_5940 PF08278 DNA primase DnaG DnaB-binding ACPL_5940 PF13662 Toprim domain ACPL_5940 PF10410 DnaB-helicase binding domain of primase ACPL_5940 PF08275 DNA primase catalytic core, N-terminal domain ACPL_5940 PF01807 CHC2 zinc finger ACPL_595 PF01169 Uncharacterized protein family UPF0016 ACPL_5955 PF13340 Putative transposase of IS4/5 family (DUF4096) ACPL_5967 PF00872 Transposase, Mutator family ACPL_5976 PF13546 DDE superfamily endonuclease ACPL_599 PF07690 Major Facilitator Superfamily ACPL_6015 PF01551 Peptidase family M23 ACPL_6015 PF01464 Transglycosylase SLT domain ACPL_6015 PF10145 Phage-related minor tail protein ACPL_6017 PF16868 NMT1-like family ACPL_6018 PF00512 His Kinase A (phospho-acceptor) domain ACPL_6018 PF08521 Two-component sensor kinase N-terminal ACPL_6018 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_6019 PF00486 Transcriptional regulatory protein, C terminal ACPL_6019 PF00072 Response regulator receiver domain ACPL_6021 PF13340 Putative transposase of IS4/5 family (DUF4096) ACPL_6026 PF02371 Transposase IS116/IS110/IS902 family ACPL_6026 PF01548 Transposase ACPL_6027 PF04297 Putative helix-turn-helix protein, YlxM / p13 like ACPL_6029 PF00589 Phage integrase family ACPL_6029 PF02899 Phage integrase, N-terminal SAM-like domain ACPL_603 PF00704 Glycosyl hydrolases family 18 ACPL_603 PF00041 Fibronectin type III domain ACPL_603 PF00553 Cellulose binding domain ACPL_6031 PF00854 POT family ACPL_6033 PF00892 EamA-like transporter family ACPL_6034 PF13673 Acetyltransferase (GNAT) domain ACPL_6036 PF02868 Thermolysin metallopeptidase, alpha-helical domain ACPL_6036 PF04389 Peptidase family M28 ACPL_6036 PF01447 Thermolysin metallopeptidase, catalytic domain ACPL_6037 PF17801 Alpha galactosidase C-terminal beta sandwich domain ACPL_6037 PF16499 Alpha galactosidase A ACPL_6039 PF00356 Bacterial regulatory proteins, lacI family ACPL_6042 PF00535 Glycosyl transferase family 2 ACPL_6043 PF02633 Creatinine amidohydrolase ACPL_6044 PF13186 Iron-sulfur cluster-binding domain ACPL_6044 PF04055 Radical SAM superfamily ACPL_6049 PF00106 short chain dehydrogenase ACPL_605 PF00106 short chain dehydrogenase ACPL_6050 PF00296 Luciferase-like monooxygenase ACPL_6051 PF00550 Phosphopantetheine attachment site ACPL_6051 PF00109 Beta-ketoacyl synthase, N-terminal domain ACPL_6051 PF14765 Polyketide synthase dehydratase ACPL_6051 PF00698 Acyl transferase domain ACPL_6051 PF16197 Ketoacyl-synthetase C-terminal extension ACPL_6051 PF08659 KR domain ACPL_6051 PF02801 Beta-ketoacyl synthase, C-terminal domain ACPL_6052 PF16197 Ketoacyl-synthetase C-terminal extension ACPL_6052 PF00109 Beta-ketoacyl synthase, N-terminal domain ACPL_6052 PF14765 Polyketide synthase dehydratase ACPL_6052 PF00698 Acyl transferase domain ACPL_6052 PF00550 Phosphopantetheine attachment site ACPL_6052 PF08659 KR domain ACPL_6052 PF02801 Beta-ketoacyl synthase, C-terminal domain ACPL_6053 PF08659 KR domain ACPL_6053 PF00698 Acyl transferase domain ACPL_6053 PF16197 Ketoacyl-synthetase C-terminal extension ACPL_6053 PF02801 Beta-ketoacyl synthase, C-terminal domain ACPL_6053 PF14765 Polyketide synthase dehydratase ACPL_6053 PF00550 Phosphopantetheine attachment site ACPL_6053 PF00109 Beta-ketoacyl synthase, N-terminal domain ACPL_6054 PF00109 Beta-ketoacyl synthase, N-terminal domain ACPL_6054 PF08659 KR domain ACPL_6054 PF00698 Acyl transferase domain ACPL_6054 PF16197 Ketoacyl-synthetase C-terminal extension ACPL_6054 PF02801 Beta-ketoacyl synthase, C-terminal domain ACPL_6054 PF08990 Erythronolide synthase docking ACPL_6054 PF00550 Phosphopantetheine attachment site ACPL_6055 PF14765 Polyketide synthase dehydratase ACPL_6055 PF08659 KR domain ACPL_6055 PF02801 Beta-ketoacyl synthase, C-terminal domain ACPL_6055 PF00550 Phosphopantetheine attachment site ACPL_6055 PF00109 Beta-ketoacyl synthase, N-terminal domain ACPL_6055 PF16197 Ketoacyl-synthetase C-terminal extension ACPL_6055 PF00698 Acyl transferase domain ACPL_6056 PF01494 FAD binding domain ACPL_6059 PF07690 Major Facilitator Superfamily ACPL_606 PF09335 SNARE associated Golgi protein ACPL_6066 PF00872 Transposase, Mutator family ACPL_6068 PF01494 FAD binding domain ACPL_607 PF04542 Sigma-70 region 2 ACPL_607 PF04539 Sigma-70 region 3 ACPL_607 PF04545 Sigma-70, region 4 ACPL_6072 PF00486 Transcriptional regulatory protein, C terminal ACPL_6072 PF00931 NB-ARC domain ACPL_6072 PF03704 Bacterial transcriptional activator domain ACPL_6074 PF17754 MftR C-terminal domain ACPL_6074 PF00440 Bacterial regulatory proteins, tetR family ACPL_6076 PF01613 Flavin reductase like domain ACPL_6077 PF00561 alpha/beta hydrolase fold ACPL_6078 PF00698 Acyl transferase domain ACPL_6078 PF00550 Phosphopantetheine attachment site ACPL_6078 PF16197 Ketoacyl-synthetase C-terminal extension ACPL_6078 PF00109 Beta-ketoacyl synthase, N-terminal domain ACPL_6078 PF08659 KR domain ACPL_6078 PF02801 Beta-ketoacyl synthase, C-terminal domain ACPL_6078 PF14765 Polyketide synthase dehydratase ACPL_6079 PF00501 AMP-binding enzyme ACPL_6079 PF13193 AMP-binding enzyme C-terminal domain ACPL_6079 PF00668 Condensation domain ACPL_6079 PF07993 Male sterility protein ACPL_6079 PF00550 Phosphopantetheine attachment site ACPL_6080 PF00501 AMP-binding enzyme ACPL_6080 PF00550 Phosphopantetheine attachment site ACPL_6080 PF13193 AMP-binding enzyme C-terminal domain ACPL_6080 PF00668 Condensation domain ACPL_6083 PF00155 Aminotransferase class I and II ACPL_6086 PF00975 Thioesterase domain ACPL_6088 PF01070 FMN-dependent dehydrogenase ACPL_609 PF00464 Serine hydroxymethyltransferase ACPL_6090 PF08448 PAS fold ACPL_6090 PF00990 Diguanylate cyclase, GGDEF domain ACPL_6093 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_6094 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_6098 PF01580 FtsK/SpoIIIE family ACPL_6100 PF07690 Major Facilitator Superfamily ACPL_6101 PF01047 MarR family ACPL_6107 PF01425 Amidase ACPL_6108 PF02785 Biotin carboxylase C-terminal domain ACPL_6108 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ACPL_6108 PF00364 Biotin-requiring enzyme ACPL_6108 PF00289 Biotin carboxylase, N-terminal domain ACPL_611 PF13407 Periplasmic binding protein domain ACPL_6112 PF17932 Tetracyclin repressor-like, C-terminal domain ACPL_6112 PF00440 Bacterial regulatory proteins, tetR family ACPL_6115 PF00535 Glycosyl transferase family 2 ACPL_6118 PF07995 Glucose / Sorbosone dehydrogenase ACPL_612 PF02653 Branched-chain amino acid transport system / permease component ACPL_6129 PF00069 Protein kinase domain ACPL_613 PF00005 ABC transporter ACPL_6130 PF00150 Cellulase (glycosyl hydrolase family 5) ACPL_6132 PF05576 PS-10 peptidase S37 ACPL_6133 PF03707 Bacterial signalling protein N terminal repeat ACPL_6133 PF00990 Diguanylate cyclase, GGDEF domain ACPL_6133 PF00563 EAL domain ACPL_6135 PF01447 Thermolysin metallopeptidase, catalytic domain ACPL_6135 PF02868 Thermolysin metallopeptidase, alpha-helical domain ACPL_6135 PF04389 Peptidase family M28 ACPL_6136 PF00072 Response regulator receiver domain ACPL_6136 PF00486 Transcriptional regulatory protein, C terminal ACPL_6139 PF00501 AMP-binding enzyme ACPL_6139 PF08242 Methyltransferase domain ACPL_6139 PF00668 Condensation domain ACPL_6139 PF00550 Phosphopantetheine attachment site ACPL_6142 PF00067 Cytochrome P450 ACPL_6143 PF00561 alpha/beta hydrolase fold ACPL_6144 PF01494 FAD binding domain ACPL_6147 PF08659 KR domain ACPL_6147 PF08240 Alcohol dehydrogenase GroES-like domain ACPL_6147 PF09277 Erythronolide synthase, docking ACPL_6147 PF14765 Polyketide synthase dehydratase ACPL_6147 PF00550 Phosphopantetheine attachment site ACPL_6147 PF00698 Acyl transferase domain ACPL_6147 PF02801 Beta-ketoacyl synthase, C-terminal domain ACPL_6147 PF00109 Beta-ketoacyl synthase, N-terminal domain ACPL_6147 PF16197 Ketoacyl-synthetase C-terminal extension ACPL_6147 PF08990 Erythronolide synthase docking ACPL_6148 PF02801 Beta-ketoacyl synthase, C-terminal domain ACPL_6148 PF08659 KR domain ACPL_6148 PF00550 Phosphopantetheine attachment site ACPL_6148 PF00109 Beta-ketoacyl synthase, N-terminal domain ACPL_6148 PF16197 Ketoacyl-synthetase C-terminal extension ACPL_6148 PF00698 Acyl transferase domain ACPL_6148 PF14765 Polyketide synthase dehydratase ACPL_6149 PF09277 Erythronolide synthase, docking ACPL_6149 PF08240 Alcohol dehydrogenase GroES-like domain ACPL_6149 PF14765 Polyketide synthase dehydratase ACPL_6149 PF00698 Acyl transferase domain ACPL_6149 PF00550 Phosphopantetheine attachment site ACPL_6149 PF08659 KR domain ACPL_6149 PF16197 Ketoacyl-synthetase C-terminal extension ACPL_6149 PF02801 Beta-ketoacyl synthase, C-terminal domain ACPL_6149 PF08990 Erythronolide synthase docking ACPL_6149 PF00109 Beta-ketoacyl synthase, N-terminal domain ACPL_615 PF00563 EAL domain ACPL_615 PF00990 Diguanylate cyclase, GGDEF domain ACPL_615 PF03707 Bacterial signalling protein N terminal repeat ACPL_6150 PF01494 FAD binding domain ACPL_6151 PF00999 Sodium/hydrogen exchanger family ACPL_6152 PF01494 FAD binding domain ACPL_6153 PF01938 TRAM domain ACPL_6153 PF04055 Radical SAM superfamily ACPL_6153 PF00919 Uncharacterized protein family UPF0004 ACPL_6154 PF00931 NB-ARC domain ACPL_6154 PF00486 Transcriptional regulatory protein, C terminal ACPL_6154 PF03704 Bacterial transcriptional activator domain ACPL_6155 PF00425 chorismate binding enzyme ACPL_6156 PF13193 AMP-binding enzyme C-terminal domain ACPL_6156 PF00501 AMP-binding enzyme ACPL_6157 PF00975 Thioesterase domain ACPL_6158 PF08242 Methyltransferase domain ACPL_6158 PF00668 Condensation domain ACPL_6158 PF00501 AMP-binding enzyme ACPL_6158 PF00550 Phosphopantetheine attachment site ACPL_6159 PF00005 ABC transporter ACPL_6160 PF00664 ABC transporter transmembrane region ACPL_6160 PF00005 ABC transporter ACPL_6160 PF08021 Siderophore-interacting FAD-binding domain ACPL_6160 PF04954 Siderophore-interacting protein ACPL_6161 PF07690 Major Facilitator Superfamily ACPL_6162 PF02909 Tetracyclin repressor-like, C-terminal domain ACPL_6162 PF00440 Bacterial regulatory proteins, tetR family ACPL_617 PF17933 Tetracyclin repressor-like, C-terminal domain ACPL_617 PF00440 Bacterial regulatory proteins, tetR family ACPL_6170 PF01740 STAS domain ACPL_6173 PF04539 Sigma-70 region 3 ACPL_6173 PF04542 Sigma-70 region 2 ACPL_6173 PF04545 Sigma-70, region 4 ACPL_6174 PF00652 Ricin-type beta-trefoil lectin domain ACPL_6174 PF00331 Glycosyl hydrolase family 10 ACPL_6175 PF00652 Ricin-type beta-trefoil lectin domain ACPL_6175 PF00331 Glycosyl hydrolase family 10 ACPL_6177 PF00150 Cellulase (glycosyl hydrolase family 5) ACPL_6177 PF00553 Cellulose binding domain ACPL_618 PF13732 Domain of unknown function (DUF4162) ACPL_618 PF00005 ABC transporter ACPL_6181 PF00990 Diguanylate cyclase, GGDEF domain ACPL_6183 PF17151 Periplasmic sensor domain ACPL_6183 PF00990 Diguanylate cyclase, GGDEF domain ACPL_6186 PF00196 Bacterial regulatory proteins, luxR family ACPL_6189 PF13302 Acetyltransferase (GNAT) domain ACPL_6191 PF00975 Thioesterase domain ACPL_6192 PF00975 Thioesterase domain ACPL_6192 PF00501 AMP-binding enzyme ACPL_6192 PF13193 AMP-binding enzyme C-terminal domain ACPL_6192 PF00668 Condensation domain ACPL_6192 PF00550 Phosphopantetheine attachment site ACPL_6193 PF00501 AMP-binding enzyme ACPL_6193 PF00975 Thioesterase domain ACPL_6193 PF00668 Condensation domain ACPL_6193 PF00550 Phosphopantetheine attachment site ACPL_6193 PF13193 AMP-binding enzyme C-terminal domain ACPL_6194 PF13193 AMP-binding enzyme C-terminal domain ACPL_6194 PF00668 Condensation domain ACPL_6194 PF16197 Ketoacyl-synthetase C-terminal extension ACPL_6194 PF00109 Beta-ketoacyl synthase, N-terminal domain ACPL_6194 PF02801 Beta-ketoacyl synthase, C-terminal domain ACPL_6194 PF08659 KR domain ACPL_6194 PF00501 AMP-binding enzyme ACPL_6194 PF14765 Polyketide synthase dehydratase ACPL_6194 PF00550 Phosphopantetheine attachment site ACPL_6198 PF00155 Aminotransferase class I and II ACPL_6200 PF13302 Acetyltransferase (GNAT) domain ACPL_6201 PF03193 RsgA GTPase ACPL_6202 PF00072 Response regulator receiver domain ACPL_6202 PF00486 Transcriptional regulatory protein, C terminal ACPL_6203 PF00990 Diguanylate cyclase, GGDEF domain ACPL_6203 PF13188 PAS domain ACPL_6203 PF03707 Bacterial signalling protein N terminal repeat ACPL_6203 PF00563 EAL domain ACPL_6205 PF00563 EAL domain ACPL_6205 PF00990 Diguanylate cyclase, GGDEF domain ACPL_6205 PF03707 Bacterial signalling protein N terminal repeat ACPL_6206 PF07730 Histidine kinase ACPL_6207 PF00072 Response regulator receiver domain ACPL_6207 PF00196 Bacterial regulatory proteins, luxR family ACPL_6208 PF00144 Beta-lactamase ACPL_621 PF00999 Sodium/hydrogen exchanger family ACPL_6215 PF04542 Sigma-70 region 2 ACPL_6215 PF08281 Sigma-70, region 4 ACPL_6216 PF08281 Sigma-70, region 4 ACPL_6216 PF04542 Sigma-70 region 2 ACPL_6220 PF01238 Phosphomannose isomerase type I ACPL_6224 PF00202 Aminotransferase class-III ACPL_623 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ACPL_623 PF05221 S-adenosyl-L-homocysteine hydrolase ACPL_6235 PF13537 Glutamine amidotransferase domain ACPL_6235 PF00733 Asparagine synthase ACPL_6237 PF02655 ATP-grasp domain ACPL_6237 PF00206 Lyase ACPL_6238 PF00668 Condensation domain ACPL_6238 PF00501 AMP-binding enzyme ACPL_6238 PF00975 Thioesterase domain ACPL_6238 PF13193 AMP-binding enzyme C-terminal domain ACPL_6238 PF00550 Phosphopantetheine attachment site ACPL_6242 PF00550 Phosphopantetheine attachment site ACPL_6243 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ACPL_6243 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ACPL_6244 PF00501 AMP-binding enzyme ACPL_6244 PF13193 AMP-binding enzyme C-terminal domain ACPL_6244 PF00668 Condensation domain ACPL_6244 PF00550 Phosphopantetheine attachment site ACPL_6246 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ACPL_6249 PF00480 ROK family ACPL_6250 PF01761 3-dehydroquinate synthase ACPL_626 PF03795 YCII-related domain ACPL_627 PF04542 Sigma-70 region 2 ACPL_627 PF08281 Sigma-70, region 4 ACPL_6274 PF13340 Putative transposase of IS4/5 family (DUF4096) ACPL_628 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACPL_6283 PF13936 Helix-turn-helix domain ACPL_6283 PF00665 Integrase core domain ACPL_6284 PF01527 Transposase ACPL_6288 PF00589 Phage integrase family ACPL_6309 PF12728 Helix-turn-helix domain ACPL_631 PF01370 NAD dependent epimerase/dehydratase family ACPL_6310 PF00589 Phage integrase family ACPL_6311 PF01926 50S ribosome-binding GTPase ACPL_6311 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ACPL_6312 PF02224 Cytidylate kinase ACPL_6314 PF13291 ACT domain ACPL_6314 PF02824 TGS domain ACPL_6314 PF04607 Region found in RelA / SpoT proteins ACPL_6315 PF00472 RF-1 domain ACPL_6315 PF03462 PCRF domain ACPL_6316 PF01139 tRNA-splicing ligase RtcB ACPL_6317 PF13193 AMP-binding enzyme C-terminal domain ACPL_6317 PF00501 AMP-binding enzyme ACPL_6319 PF12697 Alpha/beta hydrolase family ACPL_632 PF00083 Sugar (and other) transporter ACPL_6321 PF01479 S4 domain ACPL_6321 PF00849 RNA pseudouridylate synthase ACPL_6322 PF04079 Segregation and condensation complex subunit ScpB ACPL_6323 PF02616 Segregation and condensation protein ScpA ACPL_6326 PF01965 DJ-1/PfpI family ACPL_6327 PF01965 DJ-1/PfpI family ACPL_6333 PF13614 AAA domain ACPL_6334 PF00589 Phage integrase family ACPL_6334 PF02899 Phage integrase, N-terminal SAM-like domain ACPL_6335 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ACPL_6335 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ACPL_6337 PF00553 Cellulose binding domain ACPL_6337 PF00150 Cellulase (glycosyl hydrolase family 5) ACPL_634 PF03459 TOBE domain ACPL_634 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACPL_6340 PF01638 HxlR-like helix-turn-helix ACPL_6344 PF00561 alpha/beta hydrolase fold ACPL_6345 PF00293 NUDIX domain ACPL_6346 PF00117 Glutamine amidotransferase class-I ACPL_6346 PF06418 CTP synthase N-terminus ACPL_6351 PF11382 Copper transport outer membrane protein, MctB ACPL_6353 PF02463 RecF/RecN/SMC N terminal domain ACPL_6354 PF01513 ATP-NAD kinase ACPL_6355 PF01728 FtsJ-like methyltransferase ACPL_6355 PF01479 S4 domain ACPL_6359 PF00672 HAMP domain ACPL_6359 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACPL_6359 PF02203 Tar ligand binding domain homologue ACPL_636 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_6361 PF18407 GCN5-related N-acetyltransferase like domain ACPL_6361 PF13344 Haloacid dehalogenase-like hydrolase ACPL_6364 PF00579 tRNA synthetases class I (W and Y) ACPL_6365 PF03976 Polyphosphate kinase 2 (PPK2) ACPL_6367 PF05524 PEP-utilising enzyme, N-terminal ACPL_6367 PF02896 PEP-utilising enzyme, TIM barrel domain ACPL_6367 PF00391 PEP-utilising enzyme, mobile domain ACPL_6368 PF00381 PTS HPr component phosphorylation site ACPL_6369 PF00107 Zinc-binding dehydrogenase ACPL_6369 PF08240 Alcohol dehydrogenase GroES-like domain ACPL_637 PF00005 ABC transporter ACPL_637 PF03459 TOBE domain ACPL_6370 PF00381 PTS HPr component phosphorylation site ACPL_6370 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ACPL_6371 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ACPL_6371 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ACPL_6371 PF02378 Phosphotransferase system, EIIC ACPL_6372 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ACPL_6372 PF02378 Phosphotransferase system, EIIC ACPL_6372 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ACPL_6373 PF00294 pfkB family carbohydrate kinase ACPL_6374 PF00455 DeoR C terminal sensor domain ACPL_6374 PF08220 DeoR-like helix-turn-helix domain ACPL_6375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACPL_6375 PF03466 LysR substrate binding domain ACPL_6376 PF07690 Major Facilitator Superfamily ACPL_6377 PF05191 Adenylate kinase, active site lid ACPL_6380 PF00491 Arginase family ACPL_6382 PF00188 Cysteine-rich secretory protein family ACPL_6387 PF02245 Methylpurine-DNA glycosylase (MPG) ACPL_6388 PF13538 UvrD-like helicase C-terminal domain ACPL_6389 PF12706 Beta-lactamase superfamily domain ACPL_6392 PF09423 PhoD-like phosphatase ACPL_6392 PF16655 PhoD-like phosphatase, N-terminal domain ACPL_6397 PF01925 Sulfite exporter TauE/SafE ACPL_6398 PF00563 EAL domain ACPL_6398 PF00990 Diguanylate cyclase, GGDEF domain ACPL_6398 PF03707 Bacterial signalling protein N terminal repeat ACPL_6399 PF02806 Alpha amylase, C-terminal all-beta domain ACPL_6399 PF03714 Bacterial pullanase-associated domain ACPL_6399 PF00128 Alpha amylase, catalytic domain ACPL_640 PF01869 BadF/BadG/BcrA/BcrD ATPase family ACPL_6400 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_6401 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_6401 PF14785 Maltose transport system permease protein MalF P2 domain ACPL_6403 PF00356 Bacterial regulatory proteins, lacI family ACPL_6404 PF01546 Peptidase family M20/M25/M40 ACPL_6404 PF07687 Peptidase dimerisation domain ACPL_6405 PF14698 Argininosuccinate lyase C-terminal ACPL_6405 PF00206 Lyase ACPL_641 PF01380 SIS domain ACPL_641 PF01418 Helix-turn-helix domain, rpiR family ACPL_6412 PF02774 Semialdehyde dehydrogenase, dimerisation domain ACPL_6412 PF01118 Semialdehyde dehydrogenase, NAD binding domain ACPL_6413 PF01960 ArgJ family ACPL_6414 PF00696 Amino acid kinase family ACPL_6415 PF00202 Aminotransferase class-III ACPL_6416 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ACPL_6416 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ACPL_6417 PF02863 Arginine repressor, C-terminal domain ACPL_6417 PF01316 Arginine repressor, DNA binding domain ACPL_6419 PF00764 Arginosuccinate synthase ACPL_642 PF13580 SIS domain ACPL_6421 PF08281 Sigma-70, region 4 ACPL_6421 PF04542 Sigma-70 region 2 ACPL_6424 PF10017 Histidine-specific methyltransferase, SAM-dependent ACPL_6426 PF12867 DinB superfamily ACPL_6426 PF03781 Sulfatase-modifying factor enzyme 1 ACPL_6427 PF04107 Glutamate-cysteine ligase family 2(GCS2) ACPL_6428 PF00933 Glycosyl hydrolase family 3 N terminal domain ACPL_6428 PF14310 Fibronectin type III-like domain ACPL_6428 PF01915 Glycosyl hydrolase family 3 C-terminal domain ACPL_6433 PF02698 DUF218 domain ACPL_6434 PF01494 FAD binding domain ACPL_6436 PF04389 Peptidase family M28 ACPL_6436 PF04151 Bacterial pre-peptidase C-terminal domain ACPL_6441 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ACPL_6441 PF03483 B3/4 domain ACPL_6441 PF03147 Ferredoxin-fold anticodon binding domain ACPL_6441 PF03484 tRNA synthetase B5 domain ACPL_6441 PF01588 Putative tRNA binding domain ACPL_6442 PF01409 tRNA synthetases class II core domain (F) ACPL_6442 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ACPL_6443 PF08032 RNA 2'-O ribose methyltransferase substrate binding ACPL_6443 PF00588 SpoU rRNA Methylase family ACPL_6444 PF00453 Ribosomal protein L20 ACPL_6445 PF01632 Ribosomal protein L35 ACPL_6446 PF00707 Translation initiation factor IF-3, C-terminal domain ACPL_6446 PF05198 Translation initiation factor IF-3, N-terminal domain ACPL_6448 PF01634 ATP phosphoribosyltransferase ACPL_6448 PF08029 HisG, C-terminal domain ACPL_6449 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ACPL_6450 PF00497 Bacterial extracellular solute-binding proteins, family 3 ACPL_6451 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_6452 PF00005 ABC transporter ACPL_6453 PF00885 6,7-dimethyl-8-ribityllumazine synthase ACPL_6454 PF00925 GTP cyclohydrolase II ACPL_6454 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ACPL_6455 PF00677 Lumazine binding domain ACPL_6456 PF01872 RibD C-terminal domain ACPL_6456 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ACPL_6457 PF00266 Aminotransferase class-V ACPL_6459 PF01553 Acyltransferase ACPL_6460 PF00072 Response regulator receiver domain ACPL_6460 PF00486 Transcriptional regulatory protein, C terminal ACPL_6461 PF00834 Ribulose-phosphate 3 epimerase family ACPL_6462 PF01029 NusB family ACPL_6462 PF01189 16S rRNA methyltransferase RsmB/F ACPL_6463 PF00551 Formyl transferase ACPL_6463 PF02911 Formyl transferase, C-terminal domain ACPL_6464 PF01327 Polypeptide deformylase ACPL_6465 PF17764 3′ DNA-binding domain (3′BD) ACPL_6466 PF00438 S-adenosylmethionine synthetase, N-terminal domain ACPL_6466 PF02772 S-adenosylmethionine synthetase, central domain ACPL_6466 PF02773 S-adenosylmethionine synthetase, C-terminal domain ACPL_6467 PF02441 Flavoprotein ACPL_6467 PF04127 DNA / pantothenate metabolism flavoprotein ACPL_6468 PF01192 RNA polymerase Rpb6 ACPL_6469 PF00625 Guanylate kinase ACPL_6471 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ACPL_6472 PF00202 Aminotransferase class-III ACPL_6473 PF01180 Dihydroorotate dehydrogenase ACPL_6474 PF02142 MGS-like domain ACPL_6474 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ACPL_6474 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ACPL_6475 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ACPL_6475 PF00117 Glutamine amidotransferase class-I ACPL_6476 PF01979 Amidohydrolase family ACPL_6477 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ACPL_6477 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ACPL_6478 PF00156 Phosphoribosyl transferase domain ACPL_6480 PF01029 NusB family ACPL_6481 PF09285 Elongation factor P, C-terminal ACPL_6481 PF01132 Elongation factor P (EF-P) OB domain ACPL_6481 PF08207 Elongation factor P (EF-P) KOW-like domain ACPL_6482 PF01220 Dehydroquinase class II ACPL_6483 PF01761 3-dehydroquinate synthase ACPL_6484 PF01202 Shikimate kinase ACPL_6485 PF01264 Chorismate synthase ACPL_6486 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ACPL_6486 PF08501 Shikimate dehydrogenase substrate binding domain ACPL_6487 PF02618 YceG-like family ACPL_6489 PF03652 Holliday junction resolvase ACPL_649 PF03477 ATP cone domain ACPL_649 PF02867 Ribonucleotide reductase, barrel domain ACPL_649 PF00317 Ribonucleotide reductase, all-alpha domain ACPL_6490 PF02272 DHHA1 domain ACPL_6490 PF01411 tRNA synthetases class II (A) ACPL_6490 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ACPL_6495 PF00004 ATPase family associated with various cellular activities (AAA) ACPL_6495 PF12002 MgsA AAA+ ATPase C terminal ACPL_6495 PF16193 AAA C-terminal domain ACPL_650 PF00268 Ribonucleotide reductase, small chain ACPL_6500 PF01336 OB-fold nucleic acid binding domain ACPL_6500 PF00152 tRNA synthetases class II (D, K and N) ACPL_6500 PF02938 GAD domain ACPL_6508 PF02838 Glycosyl hydrolase family 20, domain 2 ACPL_6508 PF00728 Glycosyl hydrolase family 20, catalytic domain ACPL_6510 PF01979 Amidohydrolase family ACPL_6511 PF01042 Endoribonuclease L-PSP ACPL_6512 PF00069 Protein kinase domain ACPL_6513 PF00547 Urease, gamma subunit ACPL_6514 PF00699 Urease beta subunit ACPL_6515 PF01979 Amidohydrolase family ACPL_6515 PF00449 Urease alpha-subunit, N-terminal domain ACPL_6516 PF08240 Alcohol dehydrogenase GroES-like domain ACPL_6516 PF00107 Zinc-binding dehydrogenase ACPL_6517 PF04542 Sigma-70 region 2 ACPL_6517 PF04539 Sigma-70 region 3 ACPL_6517 PF04545 Sigma-70, region 4 ACPL_6519 PF00069 Protein kinase domain ACPL_652 PF13519 von Willebrand factor type A domain ACPL_6522 PF01638 HxlR-like helix-turn-helix ACPL_6524 PF03129 Anticodon binding domain ACPL_6524 PF13393 Histidyl-tRNA synthetase ACPL_6525 PF00753 Metallo-beta-lactamase superfamily ACPL_6527 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ACPL_6528 PF02824 TGS domain ACPL_6528 PF13291 ACT domain ACPL_6528 PF04607 Region found in RelA / SpoT proteins ACPL_6529 PF00156 Phosphoribosyl transferase domain ACPL_653 PF01791 DeoC/LacD family aldolase ACPL_6530 PF07549 SecD/SecF GG Motif ACPL_6530 PF02355 Protein export membrane protein ACPL_6531 PF07549 SecD/SecF GG Motif ACPL_6531 PF02355 Protein export membrane protein ACPL_6532 PF02699 Preprotein translocase subunit ACPL_6533 PF05496 Holliday junction DNA helicase RuvB P-loop domain ACPL_6533 PF05491 RuvB C-terminal winged helix domain ACPL_6533 PF17864 RuvB AAA lid domain ACPL_6534 PF07499 RuvA, C-terminal domain ACPL_6534 PF01330 RuvA N terminal domain ACPL_6535 PF02075 Crossover junction endodeoxyribonuclease RuvC ACPL_6541 PF01709 Transcriptional regulator ACPL_6542 PF01174 SNO glutamine amidotransferase family ACPL_6543 PF01680 SOR/SNZ family ACPL_6545 PF13439 Glycosyltransferase Family 4 ACPL_6546 PF03279 Bacterial lipid A biosynthesis acyltransferase ACPL_6548 PF00009 Elongation factor Tu GTP binding domain ACPL_6548 PF03764 Elongation factor G, domain IV ACPL_6548 PF14492 Elongation Factor G, domain II ACPL_6548 PF00679 Elongation factor G C-terminus ACPL_6548 PF03144 Elongation factor Tu domain 2 ACPL_6549 PF01494 FAD binding domain ACPL_6551 PF01230 HIT domain ACPL_6552 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ACPL_6552 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ACPL_6552 PF03129 Anticodon binding domain ACPL_6554 PF00072 Response regulator receiver domain ACPL_6554 PF00486 Transcriptional regulatory protein, C terminal ACPL_6555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_6555 PF00512 His Kinase A (phospho-acceptor) domain ACPL_6555 PF00672 HAMP domain ACPL_6556 PF00759 Glycosyl hydrolase family 9 ACPL_6556 PF00041 Fibronectin type III domain ACPL_6556 PF00942 Cellulose binding domain ACPL_6556 PF00553 Cellulose binding domain ACPL_6558 PF00962 Adenosine/AMP deaminase ACPL_656 PF08281 Sigma-70, region 4 ACPL_656 PF04542 Sigma-70 region 2 ACPL_6560 PF00248 Aldo/keto reductase family ACPL_6562 PF00313 'Cold-shock' DNA-binding domain ACPL_6569 PF00933 Glycosyl hydrolase family 3 N terminal domain ACPL_6569 PF01915 Glycosyl hydrolase family 3 C-terminal domain ACPL_6571 PF00271 Helicase conserved C-terminal domain ACPL_6571 PF00270 DEAD/DEAH box helicase ACPL_6573 PF00753 Metallo-beta-lactamase superfamily ACPL_6573 PF16123 Hydroxyacylglutathione hydrolase C-terminus ACPL_6577 PF01494 FAD binding domain ACPL_6578 PF00196 Bacterial regulatory proteins, luxR family ACPL_6578 PF00072 Response regulator receiver domain ACPL_6579 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_6579 PF07730 Histidine kinase ACPL_6581 PF00005 ABC transporter ACPL_6582 PF13439 Glycosyltransferase Family 4 ACPL_6582 PF00534 Glycosyl transferases group 1 ACPL_6586 PF03364 Polyketide cyclase / dehydrase and lipid transport ACPL_660 PF00072 Response regulator receiver domain ACPL_660 PF00990 Diguanylate cyclase, GGDEF domain ACPL_6601 PF00459 Inositol monophosphatase family ACPL_6602 PF02678 Pirin ACPL_6602 PF05726 Pirin C-terminal cupin domain ACPL_6603 PF10431 C-terminal, D2-small domain, of ClpB protein ACPL_6603 PF00004 ATPase family associated with various cellular activities (AAA) ACPL_6603 PF17871 AAA lid domain ACPL_6603 PF02861 Clp amino terminal domain, pathogenicity island component ACPL_6603 PF07724 AAA domain (Cdc48 subfamily) ACPL_6605 PF02073 Thermophilic metalloprotease (M29) ACPL_6608 PF00196 Bacterial regulatory proteins, luxR family ACPL_6608 PF00072 Response regulator receiver domain ACPL_6613 PF00576 HIUase/Transthyretin family ACPL_6614 PF00270 DEAD/DEAH box helicase ACPL_6614 PF00271 Helicase conserved C-terminal domain ACPL_6614 PF08482 ATP-dependent helicase C-terminal ACPL_6614 PF04408 Helicase associated domain (HA2) ACPL_6615 PF13649 Methyltransferase domain ACPL_6616 PF03707 Bacterial signalling protein N terminal repeat ACPL_6616 PF00563 EAL domain ACPL_6616 PF00990 Diguanylate cyclase, GGDEF domain ACPL_662 PF00990 Diguanylate cyclase, GGDEF domain ACPL_662 PF00072 Response regulator receiver domain ACPL_6620 PF01809 Putative membrane protein insertion efficiency factor ACPL_6621 PF00128 Alpha amylase, catalytic domain ACPL_6621 PF11941 Domain of unknown function (DUF3459) ACPL_6622 PF00128 Alpha amylase, catalytic domain ACPL_6623 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ACPL_6623 PF00128 Alpha amylase, catalytic domain ACPL_6625 PF13439 Glycosyltransferase Family 4 ACPL_6625 PF00534 Glycosyl transferases group 1 ACPL_6628 PF00999 Sodium/hydrogen exchanger family ACPL_6631 PF00756 Putative esterase ACPL_6637 PF00672 HAMP domain ACPL_6637 PF00512 His Kinase A (phospho-acceptor) domain ACPL_6637 PF00989 PAS fold ACPL_6637 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_6639 PF02390 Putative methyltransferase ACPL_6640 PF04052 TolB amino-terminal domain ACPL_6640 PF07676 WD40-like Beta Propeller Repeat ACPL_6642 PF00561 alpha/beta hydrolase fold ACPL_6645 PF00474 Sodium:solute symporter family ACPL_6647 PF01494 FAD binding domain ACPL_6648 PF13419 Haloacid dehalogenase-like hydrolase ACPL_6649 PF00296 Luciferase-like monooxygenase ACPL_6650 PF00535 Glycosyl transferase family 2 ACPL_6651 PF00296 Luciferase-like monooxygenase ACPL_6659 PF00768 D-alanyl-D-alanine carboxypeptidase ACPL_6659 PF07943 Penicillin-binding protein 5, C-terminal domain ACPL_6661 PF04545 Sigma-70, region 4 ACPL_6661 PF04539 Sigma-70 region 3 ACPL_6661 PF04542 Sigma-70 region 2 ACPL_6662 PF01209 ubiE/COQ5 methyltransferase family ACPL_6663 PF13538 UvrD-like helicase C-terminal domain ACPL_6665 PF04539 Sigma-70 region 3 ACPL_6665 PF04542 Sigma-70 region 2 ACPL_6665 PF04545 Sigma-70, region 4 ACPL_6666 PF00271 Helicase conserved C-terminal domain ACPL_6666 PF00270 DEAD/DEAH box helicase ACPL_6672 PF02146 Sir2 family ACPL_6673 PF00356 Bacterial regulatory proteins, lacI family ACPL_6674 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ACPL_6675 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ACPL_6675 PF00005 ABC transporter ACPL_6676 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_6677 PF12911 N-terminal TM domain of oligopeptide transport permease C ACPL_6677 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_6678 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ACPL_6678 PF00005 ABC transporter ACPL_6679 PF00232 Glycosyl hydrolase family 1 ACPL_6685 PF03989 DNA gyrase C-terminal domain, beta-propeller ACPL_6685 PF00521 DNA gyrase/topoisomerase IV, subunit A ACPL_6686 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_6686 PF01751 Toprim domain ACPL_6686 PF00986 DNA gyrase B subunit, carboxyl terminus ACPL_6686 PF00204 DNA gyrase B ACPL_6687 PF00072 Response regulator receiver domain ACPL_6687 PF00211 Adenylate and Guanylate cyclase catalytic domain ACPL_6688 PF00072 Response regulator receiver domain ACPL_6688 PF00196 Bacterial regulatory proteins, luxR family ACPL_6690 PF00512 His Kinase A (phospho-acceptor) domain ACPL_6690 PF00672 HAMP domain ACPL_6690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_6691 PF00072 Response regulator receiver domain ACPL_6691 PF00486 Transcriptional regulatory protein, C terminal ACPL_6692 PF00929 Exonuclease ACPL_6692 PF01541 GIY-YIG catalytic domain ACPL_6693 PF01047 MarR family ACPL_6694 PF00892 EamA-like transporter family ACPL_6696 PF07728 AAA domain (dynein-related subfamily) ACPL_6699 PF05762 VWA domain containing CoxE-like protein ACPL_670 PF03176 MMPL family ACPL_6704 PF00082 Subtilase family ACPL_671 PF00440 Bacterial regulatory proteins, tetR family ACPL_6714 PF00709 Adenylosuccinate synthetase ACPL_6718 PF04075 F420H(2)-dependent quinone reductase ACPL_6719 PF00082 Subtilase family ACPL_672 PF07859 alpha/beta hydrolase fold ACPL_672 PF00331 Glycosyl hydrolase family 10 ACPL_6720 PF00174 Oxidoreductase molybdopterin binding domain ACPL_6721 PF00970 Oxidoreductase FAD-binding domain ACPL_6721 PF00042 Globin ACPL_6721 PF00175 Oxidoreductase NAD-binding domain ACPL_6722 PF05922 Peptidase inhibitor I9 ACPL_6722 PF00082 Subtilase family ACPL_6723 PF16874 Glycosyl hydrolase family 36 C-terminal domain ACPL_6723 PF16875 Glycosyl hydrolase family 36 N-terminal domain ACPL_6725 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_6726 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_6727 PF08532 Beta-galactosidase trimerisation domain ACPL_6727 PF08533 Beta-galactosidase C-terminal domain ACPL_6727 PF02449 Beta-galactosidase ACPL_6728 PF00356 Bacterial regulatory proteins, lacI family ACPL_6729 PF00196 Bacterial regulatory proteins, luxR family ACPL_6729 PF00072 Response regulator receiver domain ACPL_6730 PF05231 MASE1 ACPL_6730 PF07730 Histidine kinase ACPL_6730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_6732 PF12704 MacB-like periplasmic core domain ACPL_6732 PF00005 ABC transporter ACPL_6732 PF02687 FtsX-like permease family ACPL_6734 PF13472 GDSL-like Lipase/Acylhydrolase family ACPL_6737 PF00069 Protein kinase domain ACPL_6738 PF00512 His Kinase A (phospho-acceptor) domain ACPL_6738 PF00072 Response regulator receiver domain ACPL_6738 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_6738 PF08448 PAS fold ACPL_6738 PF13188 PAS domain ACPL_6739 PF14572 Phosphoribosyl synthetase-associated domain ACPL_6739 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ACPL_6740 PF00005 ABC transporter ACPL_6742 PF00027 Cyclic nucleotide-binding domain ACPL_6742 PF00005 ABC transporter ACPL_6743 PF01544 CorA-like Mg2+ transporter protein ACPL_6744 PF04973 Nicotinamide mononucleotide transporter ACPL_6745 PF03594 Benzoate membrane transport protein ACPL_6746 PF07690 Major Facilitator Superfamily ACPL_6747 PF00440 Bacterial regulatory proteins, tetR family ACPL_6749 PF04542 Sigma-70 region 2 ACPL_6749 PF08281 Sigma-70, region 4 ACPL_6749 PF12680 SnoaL-like domain ACPL_675 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ACPL_675 PF01872 RibD C-terminal domain ACPL_6750 PF00155 Aminotransferase class I and II ACPL_6753 PF01483 Proprotein convertase P-domain ACPL_6753 PF04389 Peptidase family M28 ACPL_6756 PF01878 EVE domain ACPL_6759 PF00440 Bacterial regulatory proteins, tetR family ACPL_676 PF00925 GTP cyclohydrolase II ACPL_6763 PF10503 Esterase PHB depolymerase ACPL_6766 PF12704 MacB-like periplasmic core domain ACPL_6766 PF00005 ABC transporter ACPL_6766 PF02687 FtsX-like permease family ACPL_6768 PF09924 Uncharacterised conserved protein (DUF2156) ACPL_677 PF00990 Diguanylate cyclase, GGDEF domain ACPL_677 PF01590 GAF domain ACPL_677 PF00563 EAL domain ACPL_677 PF00989 PAS fold ACPL_6779 PF04686 Streptomyces sporulation and cell division protein, SsgA ACPL_6781 PF02082 Transcriptional regulator ACPL_6785 PF00990 Diguanylate cyclase, GGDEF domain ACPL_6785 PF00072 Response regulator receiver domain ACPL_6786 PF04978 Protein of unknown function (DUF664) ACPL_6787 PF00909 Ammonium Transporter Family ACPL_6792 PF01569 PAP2 superfamily ACPL_6794 PF02142 MGS-like domain ACPL_6794 PF00781 Diacylglycerol kinase catalytic domain ACPL_6799 PF02983 Alpha-lytic protease prodomain ACPL_6799 PF00089 Trypsin ACPL_680 PF02872 5'-nucleotidase, C-terminal domain ACPL_680 PF00149 Calcineurin-like phosphoesterase ACPL_6800 PF00486 Transcriptional regulatory protein, C terminal ACPL_6800 PF00072 Response regulator receiver domain ACPL_6801 PF03358 NADPH-dependent FMN reductase ACPL_6802 PF05922 Peptidase inhibitor I9 ACPL_6802 PF00082 Subtilase family ACPL_6805 PF00072 Response regulator receiver domain ACPL_6805 PF00196 Bacterial regulatory proteins, luxR family ACPL_6806 PF07730 Histidine kinase ACPL_681 PF03466 LysR substrate binding domain ACPL_681 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACPL_6810 PF01965 DJ-1/PfpI family ACPL_6811 PF00857 Isochorismatase family ACPL_6813 PF13411 MerR HTH family regulatory protein ACPL_6815 PF00294 pfkB family carbohydrate kinase ACPL_6816 PF01081 KDPG and KHG aldolase ACPL_6818 PF00392 Bacterial regulatory proteins, gntR family ACPL_6818 PF07702 UTRA domain ACPL_6819 PF01494 FAD binding domain ACPL_6823 PF00534 Glycosyl transferases group 1 ACPL_6824 PF13439 Glycosyltransferase Family 4 ACPL_6827 PF03551 Transcriptional regulator PadR-like family ACPL_6827 PF13847 Methyltransferase domain ACPL_6829 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ACPL_6829 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ACPL_683 PF06737 Transglycosylase-like domain ACPL_6831 PF00266 Aminotransferase class-V ACPL_6832 PF03301 Tryptophan 2,3-dioxygenase ACPL_6834 PF17200 Single Cache domain 2 ACPL_6834 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACPL_6834 PF00672 HAMP domain ACPL_6836 PF00704 Glycosyl hydrolases family 18 ACPL_6836 PF00041 Fibronectin type III domain ACPL_6838 PF00128 Alpha amylase, catalytic domain ACPL_6839 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_684 PF03435 Saccharopine dehydrogenase NADP binding domain ACPL_6840 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_6841 PF13416 Bacterial extracellular solute-binding protein ACPL_6842 PF00356 Bacterial regulatory proteins, lacI family ACPL_6843 PF01740 STAS domain ACPL_6843 PF00916 Sulfate permease family ACPL_6845 PF04107 Glutamate-cysteine ligase family 2(GCS2) ACPL_6845 PF14403 Circularly permuted ATP-grasp type 2 ACPL_6846 PF13537 Glutamine amidotransferase domain ACPL_6846 PF00733 Asparagine synthase ACPL_6849 PF07362 Post-segregation antitoxin CcdA ACPL_685 PF01795 MraW methylase family ACPL_6853 PF04072 Leucine carboxyl methyltransferase ACPL_6855 PF00512 His Kinase A (phospho-acceptor) domain ACPL_6855 PF00072 Response regulator receiver domain ACPL_6855 PF08448 PAS fold ACPL_6855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_6855 PF13188 PAS domain ACPL_6856 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACPL_6857 PF01513 ATP-NAD kinase ACPL_6864 PF00664 ABC transporter transmembrane region ACPL_6864 PF00005 ABC transporter ACPL_6865 PF00664 ABC transporter transmembrane region ACPL_6865 PF00005 ABC transporter ACPL_6867 PF00245 Alkaline phosphatase ACPL_6868 PF00072 Response regulator receiver domain ACPL_6868 PF00196 Bacterial regulatory proteins, luxR family ACPL_6869 PF07730 Histidine kinase ACPL_6871 PF13732 Domain of unknown function (DUF4162) ACPL_6871 PF00005 ABC transporter ACPL_6873 PF00005 ABC transporter ACPL_6874 PF00075 RNase H ACPL_6875 PF12802 MarR family ACPL_6881 PF01547 Bacterial extracellular solute-binding protein ACPL_6882 PF13298 DNA polymerase Ligase (LigD) ACPL_6882 PF01068 ATP dependent DNA ligase domain ACPL_6882 PF04679 ATP dependent DNA ligase C terminal region ACPL_6884 PF07730 Histidine kinase ACPL_6885 PF00072 Response regulator receiver domain ACPL_6885 PF00196 Bacterial regulatory proteins, luxR family ACPL_6886 PF00563 EAL domain ACPL_6886 PF00990 Diguanylate cyclase, GGDEF domain ACPL_6886 PF08448 PAS fold ACPL_6886 PF08447 PAS fold ACPL_6888 PF00296 Luciferase-like monooxygenase ACPL_6890 PF00011 Hsp20/alpha crystallin family ACPL_6891 PF00817 impB/mucB/samB family ACPL_6891 PF11799 impB/mucB/samB family C-terminal domain ACPL_6892 PF00313 'Cold-shock' DNA-binding domain ACPL_6893 PF04542 Sigma-70 region 2 ACPL_6893 PF04545 Sigma-70, region 4 ACPL_6895 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ACPL_6896 PF04542 Sigma-70 region 2 ACPL_6896 PF12680 SnoaL-like domain ACPL_6896 PF08281 Sigma-70, region 4 ACPL_6898 PF02514 CobN/Magnesium Chelatase ACPL_6899 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ACPL_6899 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ACPL_6900 PF02570 Precorrin-8X methylmutase ACPL_6901 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ACPL_6904 PF13439 Glycosyltransferase Family 4 ACPL_6904 PF00534 Glycosyl transferases group 1 ACPL_6908 PF00534 Glycosyl transferases group 1 ACPL_6909 PF00535 Glycosyl transferase family 2 ACPL_691 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase ACPL_6912 PF04954 Siderophore-interacting protein ACPL_6912 PF08021 Siderophore-interacting FAD-binding domain ACPL_6913 PF07690 Major Facilitator Superfamily ACPL_6916 PF12894 Anaphase-promoting complex subunit 4 WD40 domain ACPL_6916 PF00400 WD domain, G-beta repeat ACPL_6917 PF01648 4'-phosphopantetheinyl transferase superfamily ACPL_6917 PF17837 4'-phosphopantetheinyl transferase N-terminal domain ACPL_692 PF00793 DAHP synthetase I family ACPL_6920 PF00343 Carbohydrate phosphorylase ACPL_6924 PF00005 ABC transporter ACPL_6924 PF17760 UvrA interaction domain ACPL_6924 PF17755 UvrA DNA-binding domain ACPL_6929 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACPL_6929 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACPL_6929 PF02770 Acyl-CoA dehydrogenase, middle domain ACPL_693 PF00672 HAMP domain ACPL_693 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_693 PF00512 His Kinase A (phospho-acceptor) domain ACPL_694 PF00072 Response regulator receiver domain ACPL_694 PF00486 Transcriptional regulatory protein, C terminal ACPL_6947 PF13180 PDZ domain ACPL_6948 PF17863 AAA lid domain ACPL_6948 PF07726 ATPase family associated with various cellular activities (AAA) ACPL_6949 PF01882 Protein of unknown function DUF58 ACPL_6950 PF13519 von Willebrand factor type A domain ACPL_6950 PF07584 Aerotolerance regulator N-terminal ACPL_6951 PF07584 Aerotolerance regulator N-terminal ACPL_6951 PF13519 von Willebrand factor type A domain ACPL_6953 PF01266 FAD dependent oxidoreductase ACPL_6957 PF18698 Histidine kinase sensor domain ACPL_6957 PF00512 His Kinase A (phospho-acceptor) domain ACPL_6957 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_6957 PF00672 HAMP domain ACPL_6959 PF10502 Signal peptidase, peptidase S26 ACPL_6960 PF00005 ABC transporter ACPL_6960 PF00664 ABC transporter transmembrane region ACPL_6965 PF13421 SPFH domain-Band 7 family ACPL_6974 PF07859 alpha/beta hydrolase fold ACPL_6975 PF13280 WYL domain ACPL_6975 PF08279 HTH domain ACPL_6982 PF04542 Sigma-70 region 2 ACPL_6982 PF08281 Sigma-70, region 4 ACPL_699 PF00072 Response regulator receiver domain ACPL_699 PF01339 CheB methylesterase ACPL_6992 PF00175 Oxidoreductase NAD-binding domain ACPL_6992 PF00111 2Fe-2S iron-sulfur cluster binding domain ACPL_6992 PF00970 Oxidoreductase FAD-binding domain ACPL_6993 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ACPL_6994 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ACPL_6995 PF02571 Precorrin-6x reductase CbiJ/CobK ACPL_6996 PF00563 EAL domain ACPL_6996 PF00990 Diguanylate cyclase, GGDEF domain ACPL_6996 PF03707 Bacterial signalling protein N terminal repeat ACPL_6996 PF13188 PAS domain ACPL_6999 PF00282 Pyridoxal-dependent decarboxylase conserved domain ACPL_700 PF01590 GAF domain ACPL_700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_700 PF00512 His Kinase A (phospho-acceptor) domain ACPL_700 PF08446 PAS fold ACPL_700 PF00360 Phytochrome region ACPL_7000 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) ACPL_7001 PF04183 IucA / IucC family ACPL_7001 PF06276 Ferric iron reductase FhuF-like transporter ACPL_7002 PF01804 Penicillin amidase ACPL_7006 PF00561 alpha/beta hydrolase fold ACPL_7008 PF01965 DJ-1/PfpI family ACPL_701 PF00072 Response regulator receiver domain ACPL_7012 PF17974 Galactose-binding domain-like ACPL_7012 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase ACPL_7012 PF17451 Glycosyl hydrolase 101 beta sandwich domain ACPL_7012 PF18080 Galactose mutarotase-like fold domain ACPL_7012 PF12905 Endo-alpha-N-acetylgalactosaminidase ACPL_7012 PF08305 NPCBM/NEW2 domain ACPL_7014 PF00652 Ricin-type beta-trefoil lectin domain ACPL_7014 PF16483 Beta-1,3-glucanase ACPL_7016 PF06964 Alpha-L-arabinofuranosidase C-terminal domain ACPL_7018 PF00356 Bacterial regulatory proteins, lacI family ACPL_702 PF00459 Inositol monophosphatase family ACPL_7021 PF02770 Acyl-CoA dehydrogenase, middle domain ACPL_7021 PF12806 Acetyl-CoA dehydrogenase C-terminal like ACPL_7021 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACPL_7021 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACPL_7022 PF08447 PAS fold ACPL_7022 PF08448 PAS fold ACPL_7022 PF00563 EAL domain ACPL_7022 PF00990 Diguanylate cyclase, GGDEF domain ACPL_7025 PF00072 Response regulator receiver domain ACPL_7025 PF00196 Bacterial regulatory proteins, luxR family ACPL_7027 PF00487 Fatty acid desaturase ACPL_7029 PF02801 Beta-ketoacyl synthase, C-terminal domain ACPL_7029 PF14765 Polyketide synthase dehydratase ACPL_7029 PF00109 Beta-ketoacyl synthase, N-terminal domain ACPL_7029 PF00550 Phosphopantetheine attachment site ACPL_7029 PF00698 Acyl transferase domain ACPL_7029 PF08659 KR domain ACPL_7029 PF16197 Ketoacyl-synthetase C-terminal extension ACPL_7030 PF03176 MMPL family ACPL_7032 PF13193 AMP-binding enzyme C-terminal domain ACPL_7032 PF00501 AMP-binding enzyme ACPL_7034 PF05199 GMC oxidoreductase ACPL_7035 PF11774 Lsr2 ACPL_7037 PF03707 Bacterial signalling protein N terminal repeat ACPL_7037 PF00990 Diguanylate cyclase, GGDEF domain ACPL_7037 PF00563 EAL domain ACPL_7039 PF13419 Haloacid dehalogenase-like hydrolase ACPL_7042 PF00155 Aminotransferase class I and II ACPL_7043 PF04055 Radical SAM superfamily ACPL_7043 PF06968 Biotin and Thiamin Synthesis associated domain ACPL_7049 PF00149 Calcineurin-like phosphoesterase ACPL_7049 PF12320 Type 5 capsule protein repressor C-terminal domain ACPL_705 PF00069 Protein kinase domain ACPL_705 PF03793 PASTA domain ACPL_7050 PF13476 AAA domain ACPL_7052 PF04542 Sigma-70 region 2 ACPL_7052 PF04545 Sigma-70, region 4 ACPL_7058 PF00781 Diacylglycerol kinase catalytic domain ACPL_7061 PF12706 Beta-lactamase superfamily domain ACPL_7063 PF01966 HD domain ACPL_7063 PF13286 Phosphohydrolase-associated domain ACPL_7064 PF00440 Bacterial regulatory proteins, tetR family ACPL_7071 PF01068 ATP dependent DNA ligase domain ACPL_7071 PF04679 ATP dependent DNA ligase C terminal region ACPL_7072 PF00561 alpha/beta hydrolase fold ACPL_7078 PF01641 SelR domain ACPL_7079 PF00186 Dihydrofolate reductase ACPL_708 PF00270 DEAD/DEAH box helicase ACPL_708 PF00271 Helicase conserved C-terminal domain ACPL_708 PF00570 HRDC domain ACPL_708 PF09382 RQC domain ACPL_708 PF16124 RecQ zinc-binding ACPL_7080 PF00303 Thymidylate synthase ACPL_7081 PF03358 NADPH-dependent FMN reductase ACPL_7083 PF13673 Acetyltransferase (GNAT) domain ACPL_7086 PF01208 Uroporphyrinogen decarboxylase (URO-D) ACPL_7088 PF13180 PDZ domain ACPL_7089 PF00570 HRDC domain ACPL_7089 PF01612 3'-5' exonuclease ACPL_7090 PF02803 Thiolase, C-terminal domain ACPL_7090 PF00108 Thiolase, N-terminal domain ACPL_7091 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ACPL_7091 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ACPL_7091 PF00378 Enoyl-CoA hydratase/isomerase ACPL_7093 PF00512 His Kinase A (phospho-acceptor) domain ACPL_7093 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_7093 PF00672 HAMP domain ACPL_7094 PF00486 Transcriptional regulatory protein, C terminal ACPL_7094 PF00072 Response regulator receiver domain ACPL_7098 PF02780 Transketolase, C-terminal domain ACPL_7098 PF02779 Transketolase, pyrimidine binding domain ACPL_7098 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ACPL_7099 PF00375 Sodium:dicarboxylate symporter family ACPL_7100 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ACPL_7100 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ACPL_7101 PF01938 TRAM domain ACPL_7101 PF05958 tRNA (Uracil-5-)-methyltransferase ACPL_7102 PF13520 Amino acid permease ACPL_7103 PF02254 TrkA-N domain ACPL_7103 PF02080 TrkA-C domain ACPL_7104 PF02254 TrkA-N domain ACPL_7104 PF02080 TrkA-C domain ACPL_7108 PF00692 dUTPase ACPL_711 PF02583 Metal-sensitive transcriptional repressor ACPL_7113 PF00459 Inositol monophosphatase family ACPL_7114 PF04542 Sigma-70 region 2 ACPL_7114 PF04545 Sigma-70, region 4 ACPL_7114 PF00140 Sigma-70 factor, region 1.2 ACPL_7114 PF04539 Sigma-70 region 3 ACPL_7116 PF13426 PAS domain ACPL_7116 PF08447 PAS fold ACPL_7116 PF08448 PAS fold ACPL_7116 PF05231 MASE1 ACPL_7116 PF00990 Diguanylate cyclase, GGDEF domain ACPL_7116 PF00563 EAL domain ACPL_7117 PF04851 Type III restriction enzyme, res subunit ACPL_7118 PF03458 UPF0126 domain ACPL_712 PF00403 Heavy-metal-associated domain ACPL_7120 PF04227 Indigoidine synthase A like protein ACPL_7126 PF00672 HAMP domain ACPL_7126 PF02743 Cache domain ACPL_7126 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACPL_7129 PF01627 Hpt domain ACPL_7129 PF02895 Signal transducing histidine kinase, homodimeric domain ACPL_7129 PF07194 P2 response regulator binding domain ACPL_7129 PF01584 CheW-like domain ACPL_7129 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_7130 PF00072 Response regulator receiver domain ACPL_7130 PF00486 Transcriptional regulatory protein, C terminal ACPL_7131 PF03705 CheR methyltransferase, all-alpha domain ACPL_7131 PF01739 CheR methyltransferase, SAM binding domain ACPL_7133 PF00072 Response regulator receiver domain ACPL_7133 PF01339 CheB methylesterase ACPL_7134 PF01584 CheW-like domain ACPL_7135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACPL_7135 PF08447 PAS fold ACPL_7135 PF13426 PAS domain ACPL_7137 PF02580 D-Tyr-tRNA(Tyr) deacylase ACPL_7139 PF04542 Sigma-70 region 2 ACPL_7139 PF00140 Sigma-70 factor, region 1.2 ACPL_7139 PF04539 Sigma-70 region 3 ACPL_7139 PF04545 Sigma-70, region 4 ACPL_7141 PF00850 Histone deacetylase domain ACPL_7142 PF01325 Iron dependent repressor, N-terminal DNA binding domain ACPL_7142 PF02742 Iron dependent repressor, metal binding and dimerisation domain ACPL_7142 PF18357 Diphteria toxin repressor SH3 domain ACPL_7146 PF07690 Major Facilitator Superfamily ACPL_7149 PF03477 ATP cone domain ACPL_7151 PF00717 Peptidase S24-like ACPL_7151 PF01726 LexA DNA binding domain ACPL_7153 PF01926 50S ribosome-binding GTPase ACPL_7153 PF13167 GTP-binding GTPase N-terminal ACPL_7153 PF16360 GTP-binding GTPase Middle Region ACPL_7154 PF00390 Malic enzyme, N-terminal domain ACPL_7154 PF03949 Malic enzyme, NAD binding domain ACPL_7155 PF01678 Diaminopimelate epimerase ACPL_7157 PF03993 Domain of Unknown Function (DUF349) ACPL_7160 PF13291 ACT domain ACPL_7160 PF00291 Pyridoxal-phosphate dependent enzyme ACPL_7161 PF03466 LysR substrate binding domain ACPL_7161 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACPL_7164 PF04055 Radical SAM superfamily ACPL_7164 PF00919 Uncharacterized protein family UPF0004 ACPL_7166 PF00005 ABC transporter ACPL_7167 PF00497 Bacterial extracellular solute-binding proteins, family 3 ACPL_7169 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_717 PF00271 Helicase conserved C-terminal domain ACPL_717 PF00270 DEAD/DEAH box helicase ACPL_7170 PF00013 KH domain ACPL_7170 PF01966 HD domain ACPL_7170 PF12072 Domain of unknown function (DUF3552) ACPL_7171 PF02631 RecX family ACPL_7172 PF00154 recA bacterial DNA recombination protein ACPL_7174 PF03167 Uracil DNA glycosylase superfamily ACPL_7175 PF00155 Aminotransferase class I and II ACPL_7175 PF00392 Bacterial regulatory proteins, gntR family ACPL_7177 PF01810 LysE type translocator ACPL_7178 PF03793 PASTA domain ACPL_7178 PF00069 Protein kinase domain ACPL_7179 PF00271 Helicase conserved C-terminal domain ACPL_7179 PF08494 DEAD/H associated ACPL_7179 PF00270 DEAD/DEAH box helicase ACPL_7182 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ACPL_7182 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ACPL_7186 PF02464 Competence-damaged protein ACPL_7186 PF00994 Probable molybdopterin binding domain ACPL_7186 PF18146 Damage-inducible protein CinA KH domain ACPL_7188 PF00919 Uncharacterized protein family UPF0004 ACPL_7188 PF18693 TRAM domain ACPL_7188 PF04055 Radical SAM superfamily ACPL_7191 PF09397 Ftsk gamma domain ACPL_7191 PF17854 FtsK alpha domain ACPL_7191 PF01580 FtsK/SpoIIIE family ACPL_7193 PF02983 Alpha-lytic protease prodomain ACPL_7194 PF12706 Beta-lactamase superfamily domain ACPL_7194 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain ACPL_7194 PF17770 Ribonuclease J C-terminal domain ACPL_7195 PF00701 Dihydrodipicolinate synthetase family ACPL_7197 PF06224 Winged helix DNA-binding domain ACPL_7198 PF00583 Acetyltransferase (GNAT) family ACPL_7200 PF00313 'Cold-shock' DNA-binding domain ACPL_7202 PF05173 Dihydrodipicolinate reductase, C-terminus ACPL_7202 PF01113 Dihydrodipicolinate reductase, N-terminus ACPL_7203 PF00675 Insulinase (Peptidase family M16) ACPL_7203 PF05193 Peptidase M16 inactive domain ACPL_7204 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ACPL_7204 PF00575 S1 RNA binding domain ACPL_7204 PF00013 KH domain ACPL_7204 PF01138 3' exoribonuclease family, domain 1 ACPL_7205 PF00312 Ribosomal protein S15 ACPL_7206 PF06574 FAD synthetase ACPL_7206 PF01687 Riboflavin kinase ACPL_7207 PF00512 His Kinase A (phospho-acceptor) domain ACPL_7207 PF00072 Response regulator receiver domain ACPL_7207 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ACPL_7207 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_7207 PF01627 Hpt domain ACPL_7207 PF00672 HAMP domain ACPL_7208 PF00072 Response regulator receiver domain ACPL_7208 PF00486 Transcriptional regulatory protein, C terminal ACPL_7209 PF09142 tRNA Pseudouridine synthase II, C terminal ACPL_7209 PF16198 tRNA pseudouridylate synthase B C-terminal domain ACPL_7209 PF01509 TruB family pseudouridylate synthase (N terminal domain) ACPL_7211 PF01368 DHH family ACPL_7211 PF02272 DHHA1 domain ACPL_7212 PF02033 Ribosome-binding factor A ACPL_7215 PF00009 Elongation factor Tu GTP binding domain ACPL_7215 PF04760 Translation initiation factor IF-2, N-terminal region ACPL_7215 PF11987 Translation-initiation factor 2 ACPL_7218 PF13184 NusA-like KH domain ACPL_7218 PF08529 NusA N-terminal domain ACPL_7219 PF02576 RimP N-terminal domain ACPL_7219 PF17384 RimP C-terminal SH3 domain ACPL_7224 PF00557 Metallopeptidase family M24 ACPL_7227 PF07722 Peptidase C26 ACPL_7228 PF07722 Peptidase C26 ACPL_7230 PF00171 Aldehyde dehydrogenase family ACPL_7231 PF00120 Glutamine synthetase, catalytic domain ACPL_7235 PF00005 ABC transporter ACPL_7235 PF13732 Domain of unknown function (DUF4162) ACPL_7236 PF00196 Bacterial regulatory proteins, luxR family ACPL_7236 PF00072 Response regulator receiver domain ACPL_7237 PF07730 Histidine kinase ACPL_7240 PF00440 Bacterial regulatory proteins, tetR family ACPL_7242 PF00005 ABC transporter ACPL_7247 PF04551 GcpE protein ACPL_7248 PF02163 Peptidase family M50 ACPL_7248 PF17820 PDZ domain ACPL_7249 PF13288 DXP reductoisomerase C-terminal domain ACPL_7249 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ACPL_7249 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ACPL_725 PF00899 ThiF family ACPL_725 PF00581 Rhodanese-like domain ACPL_7253 PF00355 Rieske [2Fe-2S] domain ACPL_7256 PF04055 Radical SAM superfamily ACPL_7258 PF01765 Ribosome recycling factor ACPL_7259 PF00696 Amino acid kinase family ACPL_7260 PF00889 Elongation factor TS ACPL_7261 PF00318 Ribosomal protein S2 ACPL_7262 PF02021 Uncharacterised protein family UPF0102 ACPL_7263 PF13335 Magnesium chelatase, subunit ChlI C-terminal ACPL_7263 PF01078 Magnesium chelatase, subunit ChlI ACPL_7264 PF17782 DprA winged helix domain ACPL_7264 PF02481 DNA recombination-mediator protein A ACPL_7269 PF00589 Phage integrase family ACPL_7269 PF02899 Phage integrase, N-terminal SAM-like domain ACPL_727 PF00171 Aldehyde dehydrogenase family ACPL_7271 PF01551 Peptidase family M23 ACPL_7272 PF10611 Protein of unknown function (DUF2469) ACPL_7273 PF01351 Ribonuclease HII ACPL_7274 PF00293 NUDIX domain ACPL_7275 PF10502 Signal peptidase, peptidase S26 ACPL_7276 PF10502 Signal peptidase, peptidase S26 ACPL_7277 PF01245 Ribosomal protein L19 ACPL_7278 PF01746 tRNA (Guanine-1)-methyltransferase ACPL_7279 PF05239 PRC-barrel domain ACPL_7279 PF01782 RimM N-terminal domain ACPL_728 PF01472 PUA domain ACPL_728 PF00696 Amino acid kinase family ACPL_7281 PF00886 Ribosomal protein S16 ACPL_7283 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ACPL_7283 PF03129 Anticodon binding domain ACPL_7284 PF04545 Sigma-70, region 4 ACPL_7284 PF04542 Sigma-70 region 2 ACPL_7286 PF01979 Amidohydrolase family ACPL_7288 PF00448 SRP54-type protein, GTPase domain ACPL_7288 PF02978 Signal peptide binding domain ACPL_7288 PF02881 SRP54-type protein, helical bundle domain ACPL_7290 PF17102 Stealth protein CR3, conserved region 3 ACPL_7290 PF17103 Stealth protein CR4, conserved region 4 ACPL_7290 PF11380 Stealth protein CR2, conserved region 2 ACPL_7290 PF17101 Stealth protein CR1, conserved region 1 ACPL_7291 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ACPL_7291 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ACPL_7291 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ACPL_7293 PF00535 Glycosyl transferase family 2 ACPL_7295 PF01757 Acyltransferase family ACPL_7298 PF00535 Glycosyl transferase family 2 ACPL_730 PF04072 Leucine carboxyl methyltransferase ACPL_7301 PF00535 Glycosyl transferase family 2 ACPL_7302 PF01909 Nucleotidyltransferase domain ACPL_7302 PF08335 GlnD PII-uridylyltransferase ACPL_7302 PF01966 HD domain ACPL_7303 PF00543 Nitrogen regulatory protein P-II ACPL_7304 PF00909 Ammonium Transporter Family ACPL_7306 PF00448 SRP54-type protein, GTPase domain ACPL_7306 PF02881 SRP54-type protein, helical bundle domain ACPL_7308 PF04978 Protein of unknown function (DUF664) ACPL_731 PF00440 Bacterial regulatory proteins, tetR family ACPL_731 PF13305 Tetracyclin repressor-like, C-terminal domain ACPL_7311 PF06470 SMC proteins Flexible Hinge Domain ACPL_7311 PF02463 RecF/RecN/SMC N terminal domain ACPL_7313 PF00534 Glycosyl transferases group 1 ACPL_7316 PF06827 Zinc finger found in FPG and IleRS ACPL_7316 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ACPL_7316 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ACPL_7318 PF00035 Double-stranded RNA binding motif ACPL_7318 PF14622 Ribonuclease-III-like ACPL_7319 PF02504 Fatty acid synthesis protein ACPL_7320 PF01783 Ribosomal L32p protein family ACPL_7321 PF02620 Large ribosomal RNA subunit accumulation protein YceD ACPL_7323 PF01467 Cytidylyltransferase-like ACPL_7327 PF17191 RecG wedge domain ACPL_7327 PF00270 DEAD/DEAH box helicase ACPL_7327 PF00271 Helicase conserved C-terminal domain ACPL_7328 PF02734 DAK2 domain ACPL_7328 PF13684 Dihydroxyacetone kinase family ACPL_7329 PF00830 Ribosomal L28 family ACPL_7330 PF00009 Elongation factor Tu GTP binding domain ACPL_7330 PF03144 Elongation factor Tu domain 2 ACPL_7330 PF03143 Elongation factor Tu C-terminal domain ACPL_7331 PF02769 AIR synthase related protein, C-terminal domain ACPL_7331 PF00586 AIR synthase related protein, N-terminal domain ACPL_7334 PF07478 D-ala D-ala ligase C-terminus ACPL_7334 PF01820 D-ala D-ala ligase N-terminus ACPL_7337 PF01053 Cys/Met metabolism PLP-dependent enzyme ACPL_7338 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ACPL_7338 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ACPL_7342 PF13089 Polyphosphate kinase N-terminal domain ACPL_7342 PF17941 Polyphosphate kinase C-terminal domain 1 ACPL_7342 PF13090 Polyphosphate kinase C-terminal domain 2 ACPL_7342 PF02503 Polyphosphate kinase middle domain ACPL_7343 PF00293 NUDIX domain ACPL_7343 PF00300 Histidine phosphatase superfamily (branch 1) ACPL_7345 PF00216 Bacterial DNA-binding protein ACPL_7346 PF00694 Aconitase C-terminal domain ACPL_7347 PF00330 Aconitase family (aconitate hydratase) ACPL_7349 PF01557 Fumarylacetoacetate (FAA) hydrolase family ACPL_7350 PF01381 Helix-turn-helix ACPL_7352 PF00005 ABC transporter ACPL_7356 PF08502 LeuA allosteric (dimerisation) domain ACPL_7356 PF00682 HMGL-like ACPL_7357 PF02824 TGS domain ACPL_7357 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ACPL_7357 PF03129 Anticodon binding domain ACPL_7357 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ACPL_7358 PF13302 Acetyltransferase (GNAT) domain ACPL_736 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ACPL_7361 PF05193 Peptidase M16 inactive domain ACPL_7361 PF00675 Insulinase (Peptidase family M16) ACPL_7362 PF03462 PCRF domain ACPL_7362 PF00472 RF-1 domain ACPL_7365 PF01063 Amino-transferase class IV ACPL_7366 PF00180 Isocitrate/isopropylmalate dehydrogenase ACPL_7368 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ACPL_7368 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ACPL_7368 PF01842 ACT domain ACPL_7369 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ACPL_7369 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ACPL_7370 PF10369 Small subunit of acetolactate synthase ACPL_7371 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ACPL_7371 PF00205 Thiamine pyrophosphate enzyme, central domain ACPL_7371 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ACPL_7372 PF13188 PAS domain ACPL_7372 PF03707 Bacterial signalling protein N terminal repeat ACPL_7372 PF00990 Diguanylate cyclase, GGDEF domain ACPL_7372 PF00563 EAL domain ACPL_7373 PF00920 Dehydratase family ACPL_7376 PF00394 Multicopper oxidase ACPL_7376 PF07732 Multicopper oxidase ACPL_7376 PF07731 Multicopper oxidase ACPL_7379 PF07690 Major Facilitator Superfamily ACPL_7380 PF00356 Bacterial regulatory proteins, lacI family ACPL_7381 PF08448 PAS fold ACPL_7381 PF00563 EAL domain ACPL_7381 PF00990 Diguanylate cyclase, GGDEF domain ACPL_7381 PF08447 PAS fold ACPL_7383 PF07995 Glucose / Sorbosone dehydrogenase ACPL_7385 PF02637 GatB domain ACPL_7385 PF02934 GatB/GatE catalytic domain ACPL_7386 PF01433 Peptidase family M1 domain ACPL_7386 PF11838 ERAP1-like C-terminal domain ACPL_7387 PF01425 Amidase ACPL_7388 PF02686 Glu-tRNAGln amidotransferase C subunit ACPL_7389 PF00563 EAL domain ACPL_7389 PF03707 Bacterial signalling protein N terminal repeat ACPL_7389 PF00990 Diguanylate cyclase, GGDEF domain ACPL_739 PF08281 Sigma-70, region 4 ACPL_739 PF04542 Sigma-70 region 2 ACPL_7390 PF00533 BRCA1 C Terminus (BRCT) domain ACPL_7390 PF03120 NAD-dependent DNA ligase OB-fold domain ACPL_7390 PF12826 Helix-hairpin-helix motif ACPL_7390 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ACPL_7390 PF01653 NAD-dependent DNA ligase adenylation domain ACPL_7393 PF00266 Aminotransferase class-V ACPL_7394 PF01012 Electron transfer flavoprotein domain ACPL_7394 PF00766 Electron transfer flavoprotein FAD-binding domain ACPL_7395 PF01012 Electron transfer flavoprotein domain ACPL_7396 PF02656 Domain of unknown function (DUF202) ACPL_740 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ACPL_7400 PF08281 Sigma-70, region 4 ACPL_7400 PF04542 Sigma-70 region 2 ACPL_7401 PF00205 Thiamine pyrophosphate enzyme, central domain ACPL_7401 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ACPL_7401 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ACPL_7402 PF00012 Hsp70 protein ACPL_7403 PF00378 Enoyl-CoA hydratase/isomerase ACPL_7406 PF00294 pfkB family carbohydrate kinase ACPL_7407 PF00005 ABC transporter ACPL_7409 PF00933 Glycosyl hydrolase family 3 N terminal domain ACPL_741 PF00146 NADH dehydrogenase ACPL_7410 PF05088 Bacterial NAD-glutamate dehydrogenase ACPL_7412 PF00491 Arginase family ACPL_7413 PF00085 Thioredoxin ACPL_7415 PF01494 FAD binding domain ACPL_7418 PF00108 Thiolase, N-terminal domain ACPL_7418 PF02803 Thiolase, C-terminal domain ACPL_742 PF00037 4Fe-4S binding domain ACPL_7422 PF04244 Deoxyribodipyrimidine photo-lyase-related protein ACPL_7425 PF00005 ABC transporter ACPL_7426 PF00171 Aldehyde dehydrogenase family ACPL_743 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ACPL_7431 PF01939 Endonuclease NucS ACPL_7434 PF12538 DNA transporter ACPL_7434 PF01580 FtsK/SpoIIIE family ACPL_7436 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ACPL_7436 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ACPL_7438 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ACPL_7439 PF01923 Cobalamin adenosyltransferase ACPL_744 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ACPL_7441 PF02567 Phenazine biosynthesis-like protein ACPL_7443 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ACPL_7444 PF03816 Cell envelope-related transcriptional attenuator domain ACPL_7445 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ACPL_7445 PF02874 ATP synthase alpha/beta family, beta-barrel domain ACPL_7446 PF00231 ATP synthase ACPL_7447 PF02874 ATP synthase alpha/beta family, beta-barrel domain ACPL_7447 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ACPL_7447 PF00306 ATP synthase alpha/beta chain, C terminal domain ACPL_7448 PF00213 ATP synthase delta (OSCP) subunit ACPL_7449 PF00430 ATP synthase B/B' CF(0) ACPL_745 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus ACPL_745 PF00361 Proton-conducting membrane transporter ACPL_745 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ACPL_7450 PF00137 ATP synthase subunit C ACPL_7451 PF00119 ATP synthase A chain ACPL_7454 PF00464 Serine hydroxymethyltransferase ACPL_7455 PF11066 Protein of unknown function (DUF2867) ACPL_7455 PF13460 NAD(P)H-binding ACPL_7456 PF01042 Endoribonuclease L-PSP ACPL_7458 PF03481 Putative GTP-binding controlling metal-binding ACPL_7458 PF01300 Telomere recombination ACPL_7459 PF01451 Low molecular weight phosphotyrosine protein phosphatase ACPL_746 PF00361 Proton-conducting membrane transporter ACPL_7460 PF01300 Telomere recombination ACPL_7461 PF17827 PrmC N-terminal domain ACPL_7461 PF05175 Methyltransferase small domain ACPL_7462 PF00990 Diguanylate cyclase, GGDEF domain ACPL_7464 PF03462 PCRF domain ACPL_7464 PF00472 RF-1 domain ACPL_7465 PF01197 Ribosomal protein L31 ACPL_7469 PF02898 Nitric oxide synthase, oxygenase domain ACPL_747 PF00361 Proton-conducting membrane transporter ACPL_7470 PF07498 Rho termination factor, N-terminal domain ACPL_7470 PF07497 Rho termination factor, RNA-binding domain ACPL_7470 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ACPL_7471 PF00288 GHMP kinases N terminal domain ACPL_7473 PF00873 AcrB/AcrD/AcrF family ACPL_7474 PF01047 MarR family ACPL_7475 PF00291 Pyridoxal-phosphate dependent enzyme ACPL_7477 PF03447 Homoserine dehydrogenase, NAD binding domain ACPL_7477 PF01842 ACT domain ACPL_7477 PF00742 Homoserine dehydrogenase ACPL_7478 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ACPL_7478 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ACPL_7479 PF05746 DALR anticodon binding domain ACPL_7479 PF00750 tRNA synthetases class I (R) ACPL_7479 PF03485 Arginyl tRNA synthetase N terminal domain ACPL_748 PF01435 Peptidase family M48 ACPL_7482 PF03358 NADPH-dependent FMN reductase ACPL_7483 PF01433 Peptidase family M1 domain ACPL_7483 PF11838 ERAP1-like C-terminal domain ACPL_7485 PF07690 Major Facilitator Superfamily ACPL_7486 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ACPL_7487 PF02780 Transketolase, C-terminal domain ACPL_7487 PF02779 Transketolase, pyrimidine binding domain ACPL_7488 PF00456 Transketolase, thiamine diphosphate binding domain ACPL_7488 PF02779 Transketolase, pyrimidine binding domain ACPL_7488 PF02780 Transketolase, C-terminal domain ACPL_7489 PF01546 Peptidase family M20/M25/M40 ACPL_7490 PF01118 Semialdehyde dehydrogenase, NAD binding domain ACPL_7491 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ACPL_7493 PF08443 RimK-like ATP-grasp domain ACPL_7497 PF10502 Signal peptidase, peptidase S26 ACPL_750 PF00296 Luciferase-like monooxygenase ACPL_7501 PF00069 Protein kinase domain ACPL_7501 PF03793 PASTA domain ACPL_7505 PF01638 HxlR-like helix-turn-helix ACPL_7508 PF12833 Helix-turn-helix domain ACPL_7508 PF14525 AraC-binding-like domain ACPL_7511 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ACPL_7511 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ACPL_7515 PF03738 Glutathionylspermidine synthase preATP-grasp ACPL_7518 PF16657 Maltogenic Amylase, C-terminal domain ACPL_7518 PF00128 Alpha amylase, catalytic domain ACPL_7522 PF00704 Glycosyl hydrolases family 18 ACPL_7522 PF00041 Fibronectin type III domain ACPL_7524 PF02096 60Kd inner membrane protein ACPL_7524 PF14849 YidC periplasmic domain ACPL_7526 PF04107 Glutamate-cysteine ligase family 2(GCS2) ACPL_7528 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ACPL_7528 PF06827 Zinc finger found in FPG and IleRS ACPL_7528 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ACPL_7529 PF00574 Clp protease ACPL_7532 PF00202 Aminotransferase class-III ACPL_7539 PF17820 PDZ domain ACPL_7539 PF13180 PDZ domain ACPL_7540 PF00512 His Kinase A (phospho-acceptor) domain ACPL_7540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_7540 PF00672 HAMP domain ACPL_7541 PF00072 Response regulator receiver domain ACPL_7541 PF00486 Transcriptional regulatory protein, C terminal ACPL_7545 PF00676 Dehydrogenase E1 component ACPL_7545 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ACPL_7545 PF16078 2-oxoglutarate dehydrogenase N-terminus ACPL_7545 PF16870 2-oxoglutarate dehydrogenase C-terminal ACPL_7545 PF02779 Transketolase, pyrimidine binding domain ACPL_7547 PF07085 DRTGG domain ACPL_7547 PF01515 Phosphate acetyl/butaryl transferase ACPL_7548 PF00871 Acetokinase family ACPL_7551 PF03949 Malic enzyme, NAD binding domain ACPL_7551 PF00390 Malic enzyme, N-terminal domain ACPL_7553 PF09055 Nickel-containing superoxide dismutase ACPL_7554 PF13581 Histidine kinase-like ATPase domain ACPL_7555 PF07702 UTRA domain ACPL_7555 PF00392 Bacterial regulatory proteins, gntR family ACPL_7557 PF00781 Diacylglycerol kinase catalytic domain ACPL_7558 PF02467 Transcription factor WhiB ACPL_756 PF04461 Protein of unknown function (DUF520) ACPL_7560 PF01507 Phosphoadenosine phosphosulfate reductase family ACPL_7562 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ACPL_7562 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ACPL_7563 PF12282 Signal transduction histidine kinase ACPL_7563 PF07568 Histidine kinase ACPL_7563 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_7564 PF01380 SIS domain ACPL_7566 PF00364 Biotin-requiring enzyme ACPL_7567 PF13490 Putative zinc-finger ACPL_7568 PF04542 Sigma-70 region 2 ACPL_7568 PF08281 Sigma-70, region 4 ACPL_7571 PF02586 SOS response associated peptidase (SRAP) ACPL_7572 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ACPL_7573 PF03193 RsgA GTPase ACPL_7574 PF00459 Inositol monophosphatase family ACPL_7577 PF00704 Glycosyl hydrolases family 18 ACPL_7577 PF00041 Fibronectin type III domain ACPL_7578 PF00722 Glycosyl hydrolases family 16 ACPL_7579 PF01374 Glycosyl hydrolase family 46 ACPL_758 PF01810 LysE type translocator ACPL_7581 PF02446 4-alpha-glucanotransferase ACPL_7588 PF03741 Integral membrane protein TerC family ACPL_7589 PF00805 Pentapeptide repeats (8 copies) ACPL_759 PF00581 Rhodanese-like domain ACPL_7594 PF07690 Major Facilitator Superfamily ACPL_7596 PF07690 Major Facilitator Superfamily ACPL_7597 PF01381 Helix-turn-helix ACPL_7597 PF06114 IrrE N-terminal-like domain ACPL_7597 PF09856 Predicted transcriptional regulator (DUF2083) ACPL_7599 PF03699 Uncharacterised protein family (UPF0182) ACPL_7600 PF05362 Lon protease (S16) C-terminal proteolytic domain ACPL_7600 PF13180 PDZ domain ACPL_7606 PF03109 ABC1 family ACPL_7609 PF02178 AT hook motif ACPL_7609 PF02467 Transcription factor WhiB ACPL_7611 PF00570 HRDC domain ACPL_7611 PF13361 UvrD-like helicase C-terminal domain ACPL_7611 PF00580 UvrD/REP helicase N-terminal domain ACPL_7612 PF00462 Glutaredoxin ACPL_7614 PF00293 NUDIX domain ACPL_7614 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain ACPL_7614 PF09297 NADH pyrophosphatase zinc ribbon domain ACPL_7617 PF02082 Transcriptional regulator ACPL_7619 PF00005 ABC transporter ACPL_762 PF00990 Diguanylate cyclase, GGDEF domain ACPL_762 PF13188 PAS domain ACPL_762 PF03707 Bacterial signalling protein N terminal repeat ACPL_762 PF00563 EAL domain ACPL_7620 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_7623 PF00313 'Cold-shock' DNA-binding domain ACPL_7625 PF13361 UvrD-like helicase C-terminal domain ACPL_7625 PF00580 UvrD/REP helicase N-terminal domain ACPL_7626 PF00580 UvrD/REP helicase N-terminal domain ACPL_7626 PF13361 UvrD-like helicase C-terminal domain ACPL_7626 PF00580 UvrD/REP helicase N-terminal domain ACPL_7626 PF13361 UvrD-like helicase C-terminal domain ACPL_7627 PF03641 Possible lysine decarboxylase ACPL_7628 PF03641 Possible lysine decarboxylase ACPL_763 PF00471 Ribosomal protein L33 ACPL_7630 PF07687 Peptidase dimerisation domain ACPL_7630 PF01546 Peptidase family M20/M25/M40 ACPL_7631 PF14602 Hexapeptide repeat of succinyl-transferase ACPL_7631 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle ACPL_7634 PF09278 MerR, DNA binding ACPL_7634 PF00376 MerR family regulatory protein ACPL_764 PF13452 N-terminal half of MaoC dehydratase ACPL_7641 PF00106 short chain dehydrogenase ACPL_7644 PF00155 Aminotransferase class I and II ACPL_7645 PF00037 4Fe-4S binding domain ACPL_7646 PF00583 Acetyltransferase (GNAT) family ACPL_7649 PF02585 GlcNAc-PI de-N-acetylase ACPL_7650 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region ACPL_7650 PF00326 Prolyl oligopeptidase family ACPL_7652 PF01523 Putative modulator of DNA gyrase ACPL_7654 PF00890 FAD binding domain ACPL_7654 PF02910 Fumarate reductase flavoprotein C-term ACPL_7655 PF13183 4Fe-4S dicluster domain ACPL_7655 PF13085 2Fe-2S iron-sulfur cluster binding domain ACPL_7659 PF00005 ABC transporter ACPL_7659 PF12399 Branched-chain amino acid ATP-binding cassette transporter ACPL_7660 PF00005 ABC transporter ACPL_7662 PF02653 Branched-chain amino acid transport system / permease component ACPL_7662 PF11862 Domain of unknown function (DUF3382) ACPL_7667 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACPL_7667 PF02770 Acyl-CoA dehydrogenase, middle domain ACPL_7667 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACPL_7669 PF00196 Bacterial regulatory proteins, luxR family ACPL_7669 PF00072 Response regulator receiver domain ACPL_767 PF02357 Transcription termination factor nusG ACPL_7670 PF00107 Zinc-binding dehydrogenase ACPL_7670 PF08240 Alcohol dehydrogenase GroES-like domain ACPL_7671 PF00171 Aldehyde dehydrogenase family ACPL_7672 PF00440 Bacterial regulatory proteins, tetR family ACPL_7672 PF02909 Tetracyclin repressor-like, C-terminal domain ACPL_7673 PF13193 AMP-binding enzyme C-terminal domain ACPL_7673 PF00501 AMP-binding enzyme ACPL_7674 PF00293 NUDIX domain ACPL_768 PF00687 Ribosomal protein L1p/L10e family ACPL_7687 PF01926 50S ribosome-binding GTPase ACPL_7687 PF06071 Protein of unknown function (DUF933) ACPL_7689 PF06029 AlkA N-terminal domain ACPL_7689 PF02805 Metal binding domain of Ada ACPL_7689 PF12833 Helix-turn-helix domain ACPL_7689 PF00730 HhH-GPD superfamily base excision DNA repair protein ACPL_769 PF00005 ABC transporter ACPL_7690 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ACPL_7690 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ACPL_7690 PF02805 Metal binding domain of Ada ACPL_7690 PF12833 Helix-turn-helix domain ACPL_7694 PF08264 Anticodon-binding domain of tRNA ACPL_7694 PF00133 tRNA synthetases class I (I, L, M and V) ACPL_7698 PF02646 RmuC family ACPL_7699 PF02401 LytB protein ACPL_7701 PF02601 Exonuclease VII, large subunit ACPL_7701 PF13742 OB-fold nucleic acid binding domain ACPL_7702 PF02609 Exonuclease VII small subunit ACPL_7704 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded ACPL_7706 PF00089 Trypsin ACPL_7708 PF13638 PIN domain ACPL_7708 PF02562 PhoH-like protein ACPL_7709 PF02358 Trehalose-phosphatase ACPL_771 PF00466 Ribosomal protein L10 ACPL_7710 PF01255 Putative undecaprenyl diphosphate synthase ACPL_7711 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain ACPL_7711 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain ACPL_7712 PF04542 Sigma-70 region 2 ACPL_7712 PF08281 Sigma-70, region 4 ACPL_7718 PF01039 Carboxyl transferase domain ACPL_772 PF00542 Ribosomal protein L7/L12 C-terminal domain ACPL_772 PF16320 Ribosomal protein L7/L12 dimerisation domain ACPL_7722 PF03793 PASTA domain ACPL_7722 PF00069 Protein kinase domain ACPL_7725 PF00082 Subtilase family ACPL_7726 PF02545 Maf-like protein ACPL_7727 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ACPL_7727 PF00364 Biotin-requiring enzyme ACPL_7727 PF00289 Biotin carboxylase, N-terminal domain ACPL_7727 PF02785 Biotin carboxylase C-terminal domain ACPL_773 PF04560 RNA polymerase Rpb2, domain 7 ACPL_773 PF04563 RNA polymerase beta subunit ACPL_773 PF04561 RNA polymerase Rpb2, domain 2 ACPL_773 PF04565 RNA polymerase Rpb2, domain 3 ACPL_773 PF10385 RNA polymerase beta subunit external 1 domain ACPL_773 PF00562 RNA polymerase Rpb2, domain 6 ACPL_7730 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACPL_7730 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ACPL_7737 PF04107 Glutamate-cysteine ligase family 2(GCS2) ACPL_7737 PF01546 Peptidase family M20/M25/M40 ACPL_7738 PF02310 B12 binding domain ACPL_7738 PF01642 Methylmalonyl-CoA mutase ACPL_7739 PF00069 Protein kinase domain ACPL_7739 PF03793 PASTA domain ACPL_774 PF04997 RNA polymerase Rpb1, domain 1 ACPL_774 PF05000 RNA polymerase Rpb1, domain 4 ACPL_774 PF04983 RNA polymerase Rpb1, domain 3 ACPL_774 PF00623 RNA polymerase Rpb1, domain 2 ACPL_774 PF04998 RNA polymerase Rpb1, domain 5 ACPL_7740 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ACPL_7740 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ACPL_7740 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ACPL_7740 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ACPL_7742 PF00132 Bacterial transferase hexapeptide (six repeats) ACPL_7743 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ACPL_7743 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ACPL_7743 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ACPL_7748 PF13439 Glycosyltransferase Family 4 ACPL_7748 PF00534 Glycosyl transferases group 1 ACPL_7751 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ACPL_7754 PF01791 DeoC/LacD family aldolase ACPL_7755 PF00171 Aldehyde dehydrogenase family ACPL_7756 PF00171 Aldehyde dehydrogenase family ACPL_7762 PF03259 Roadblock/LC7 domain ACPL_7764 PF00962 Adenosine/AMP deaminase ACPL_7767 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain ACPL_7767 PF02885 Glycosyl transferase family, helical bundle domain ACPL_7767 PF00591 Glycosyl transferase family, a/b domain ACPL_7768 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ACPL_777 PF00164 Ribosomal protein S12/S23 ACPL_7777 PF00579 tRNA synthetases class I (W and Y) ACPL_7778 PF01370 NAD dependent epimerase/dehydratase family ACPL_7779 PF10509 Galactokinase galactose-binding signature ACPL_7779 PF08544 GHMP kinases C terminal ACPL_7779 PF00288 GHMP kinases N terminal domain ACPL_778 PF00177 Ribosomal protein S7p/S5e ACPL_7782 PF00009 Elongation factor Tu GTP binding domain ACPL_7783 PF01507 Phosphoadenosine phosphosulfate reductase family ACPL_7784 PF00459 Inositol monophosphatase family ACPL_7785 PF02397 Bacterial sugar transferase ACPL_7786 PF01195 Peptidyl-tRNA hydrolase ACPL_7787 PF01386 Ribosomal L25p family ACPL_7787 PF14693 Ribosomal protein TL5, C-terminal domain ACPL_7788 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ACPL_7788 PF14572 Phosphoribosyl synthetase-associated domain ACPL_7789 PF00132 Bacterial transferase hexapeptide (six repeats) ACPL_7789 PF00483 Nucleotidyl transferase ACPL_779 PF14492 Elongation Factor G, domain II ACPL_779 PF03144 Elongation factor Tu domain 2 ACPL_779 PF00679 Elongation factor G C-terminus ACPL_779 PF00009 Elongation factor Tu GTP binding domain ACPL_779 PF03764 Elongation factor G, domain IV ACPL_7791 PF00440 Bacterial regulatory proteins, tetR family ACPL_7793 PF00005 ABC transporter ACPL_7793 PF16326 ABC transporter C-terminal domain ACPL_7793 PF12848 ABC transporter ACPL_7794 PF00288 GHMP kinases N terminal domain ACPL_7794 PF08544 GHMP kinases C terminal ACPL_7795 PF00398 Ribosomal RNA adenine dimethylase ACPL_7796 PF01026 TatD related DNase ACPL_7798 PF09334 tRNA synthetases class I (M) ACPL_780 PF03144 Elongation factor Tu domain 2 ACPL_780 PF00009 Elongation factor Tu GTP binding domain ACPL_780 PF03143 Elongation factor Tu C-terminal domain ACPL_7800 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ACPL_7801 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase ACPL_7801 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase ACPL_7803 PF01522 Polysaccharide deacetylase ACPL_7807 PF00589 Phage integrase family ACPL_7807 PF02899 Phage integrase, N-terminal SAM-like domain ACPL_781 PF00338 Ribosomal protein S10p/S20e ACPL_7810 PF03453 MoeA N-terminal region (domain I and II) ACPL_7810 PF03454 MoeA C-terminal region (domain IV) ACPL_7810 PF00994 Probable molybdopterin binding domain ACPL_7811 PF00483 Nucleotidyl transferase ACPL_7812 PF00990 Diguanylate cyclase, GGDEF domain ACPL_7812 PF00072 Response regulator receiver domain ACPL_7819 PF01475 Ferric uptake regulator family ACPL_782 PF00297 Ribosomal protein L3 ACPL_7822 PF01914 MarC family integral membrane protein ACPL_7823 PF02811 PHP domain ACPL_7828 PF00085 Thioredoxin ACPL_7829 PF04055 Radical SAM superfamily ACPL_7829 PF04055 Radical SAM superfamily ACPL_783 PF00573 Ribosomal protein L4/L1 family ACPL_7831 PF00106 short chain dehydrogenase ACPL_7836 PF02567 Phenazine biosynthesis-like protein ACPL_7837 PF00571 CBS domain ACPL_7837 PF01769 Divalent cation transporter ACPL_7837 PF03448 MgtE intracellular N domain ACPL_7839 PF01883 Iron-sulfur cluster assembly protein ACPL_7839 PF10609 NUBPL iron-transfer P-loop NTPase ACPL_784 PF00276 Ribosomal protein L23 ACPL_7840 PF02416 mttA/Hcf106 family ACPL_7841 PF13180 PDZ domain ACPL_7842 PF01596 O-methyltransferase ACPL_7843 PF02789 Cytosol aminopeptidase family, N-terminal domain ACPL_7843 PF00883 Cytosol aminopeptidase family, catalytic domain ACPL_7846 PF00378 Enoyl-CoA hydratase/isomerase ACPL_7848 PF00117 Glutamine amidotransferase class-I ACPL_7848 PF13302 Acetyltransferase (GNAT) domain ACPL_7848 PF03352 Methyladenine glycosylase ACPL_7848 PF00958 GMP synthase C terminal domain ACPL_7848 PF13673 Acetyltransferase (GNAT) domain ACPL_785 PF00181 Ribosomal Proteins L2, RNA binding domain ACPL_785 PF03947 Ribosomal Proteins L2, C-terminal domain ACPL_7851 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ACPL_7852 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II ACPL_7852 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase ACPL_7852 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg ACPL_7853 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ACPL_7854 PF02254 TrkA-N domain ACPL_7854 PF07885 Ion channel ACPL_786 PF00203 Ribosomal protein S19 ACPL_7860 PF00490 Delta-aminolevulinic acid dehydratase ACPL_7861 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ACPL_7862 PF03900 Porphobilinogen deaminase, C-terminal domain ACPL_7862 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ACPL_7863 PF01488 Shikimate / quinate 5-dehydrogenase ACPL_7863 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ACPL_7863 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ACPL_7864 PF02629 CoA binding domain ACPL_7864 PF06971 Putative DNA-binding protein N-terminus ACPL_7866 PF05768 Glutaredoxin-like domain (DUF836) ACPL_7867 PF00501 AMP-binding enzyme ACPL_7867 PF13193 AMP-binding enzyme C-terminal domain ACPL_7868 PF04542 Sigma-70 region 2 ACPL_7868 PF08281 Sigma-70, region 4 ACPL_787 PF00237 Ribosomal protein L22p/L17e ACPL_7870 PF01553 Acyltransferase ACPL_7871 PF01370 NAD dependent epimerase/dehydratase family ACPL_7872 PF08213 Mitochondrial domain of unknown function (DUF1713) ACPL_7873 PF12728 Helix-turn-helix domain ACPL_7874 PF01619 Proline dehydrogenase ACPL_7876 PF01261 Xylose isomerase-like TIM barrel ACPL_7878 PF00486 Transcriptional regulatory protein, C terminal ACPL_7878 PF00072 Response regulator receiver domain ACPL_7879 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_7879 PF00512 His Kinase A (phospho-acceptor) domain ACPL_788 PF00189 Ribosomal protein S3, C-terminal domain ACPL_788 PF07650 KH domain ACPL_7880 PF01895 PhoU domain ACPL_7881 PF00300 Histidine phosphatase superfamily (branch 1) ACPL_7882 PF07690 Major Facilitator Superfamily ACPL_7884 PF10722 Putative bacterial sensory transduction regulator ACPL_7885 PF00534 Glycosyl transferases group 1 ACPL_7885 PF13439 Glycosyltransferase Family 4 ACPL_7886 PF00106 short chain dehydrogenase ACPL_7888 PF00072 Response regulator receiver domain ACPL_7888 PF00486 Transcriptional regulatory protein, C terminal ACPL_7889 PF00082 Subtilase family ACPL_7889 PF05922 Peptidase inhibitor I9 ACPL_789 PF00252 Ribosomal protein L16p/L10e ACPL_7891 PF00672 HAMP domain ACPL_7891 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_7891 PF00512 His Kinase A (phospho-acceptor) domain ACPL_7891 PF18698 Histidine kinase sensor domain ACPL_7891 PF00989 PAS fold ACPL_7892 PF03364 Polyketide cyclase / dehydrase and lipid transport ACPL_7894 PF02599 Global regulator protein family ACPL_7895 PF02623 FliW protein ACPL_7897 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ACPL_7897 PF00460 Flagella basal body rod protein ACPL_7899 PF00669 Bacterial flagellin N-terminal helical region ACPL_7899 PF00700 Bacterial flagellin C-terminal helical region ACPL_790 PF00831 Ribosomal L29 protein ACPL_7901 PF02561 Flagellar protein FliS ACPL_7903 PF00460 Flagella basal body rod protein ACPL_7904 PF00460 Flagella basal body rod protein ACPL_7904 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ACPL_7905 PF02049 Flagellar hook-basal body complex protein FliE ACPL_7906 PF01514 Secretory protein of YscJ/FliF family ACPL_7906 PF08345 Flagellar M-ring protein C-terminal ACPL_7907 PF14842 FliG N-terminal domain ACPL_7907 PF14841 FliG middle domain ACPL_7907 PF01706 FliG C-terminal domain ACPL_7909 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ACPL_7909 PF02874 ATP synthase alpha/beta family, beta-barrel domain ACPL_7909 PF18269 T3SS EscN ATPase C-terminal domain ACPL_791 PF00366 Ribosomal protein S17 ACPL_7911 PF01551 Peptidase family M23 ACPL_7911 PF10145 Phage-related minor tail protein ACPL_7911 PF01464 Transglycosylase SLT domain ACPL_7915 PF00771 FHIPEP family ACPL_7916 PF01312 FlhB HrpN YscU SpaS Family ACPL_7917 PF01311 Bacterial export proteins, family 1 ACPL_7918 PF00813 FliP family ACPL_792 PF00238 Ribosomal protein L14p/L23e ACPL_7920 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ACPL_7920 PF04509 CheC-like family ACPL_7921 PF02154 Flagellar motor switch protein FliM ACPL_7921 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ACPL_7923 PF00691 OmpA family ACPL_7923 PF13677 Membrane MotB of proton-channel complex MotA/MotB ACPL_7924 PF01618 MotA/TolQ/ExbB proton channel family ACPL_7926 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ACPL_7926 PF00460 Flagella basal body rod protein ACPL_7926 PF07559 Flagellar basal body protein FlaE ACPL_7929 PF00072 Response regulator receiver domain ACPL_793 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ACPL_793 PF00467 KOW motif ACPL_7931 PF00072 Response regulator receiver domain ACPL_7932 PF03705 CheR methyltransferase, all-alpha domain ACPL_7932 PF01739 CheR methyltransferase, SAM binding domain ACPL_7933 PF00072 Response regulator receiver domain ACPL_7933 PF01339 CheB methylesterase ACPL_7936 PF01584 CheW-like domain ACPL_7936 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_7936 PF02895 Signal transducing histidine kinase, homodimeric domain ACPL_7936 PF01627 Hpt domain ACPL_7936 PF09078 CheY binding ACPL_7937 PF00072 Response regulator receiver domain ACPL_7937 PF00486 Transcriptional regulatory protein, C terminal ACPL_7938 PF00188 Cysteine-rich secretory protein family ACPL_7939 PF01565 FAD binding domain ACPL_7939 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ACPL_794 PF00673 ribosomal L5P family C-terminus ACPL_794 PF00281 Ribosomal protein L5 ACPL_7941 PF00232 Glycosyl hydrolase family 1 ACPL_7942 PF00356 Bacterial regulatory proteins, lacI family ACPL_7943 PF01661 Macro domain ACPL_7949 PF01381 Helix-turn-helix ACPL_795 PF00253 Ribosomal protein S14p/S29e ACPL_7951 PF05853 beta-keto acid cleavage enzyme ACPL_7952 PF01571 Aminomethyltransferase folate-binding domain ACPL_7953 PF01475 Ferric uptake regulator family ACPL_7956 PF08768 Domain of unknown function (DUF1794) ACPL_796 PF00410 Ribosomal protein S8 ACPL_7960 PF13307 Helicase C-terminal domain ACPL_7962 PF08281 Sigma-70, region 4 ACPL_7962 PF04542 Sigma-70 region 2 ACPL_7962 PF12680 SnoaL-like domain ACPL_7965 PF01384 Phosphate transporter family ACPL_7966 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ACPL_7966 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ACPL_7968 PF00005 ABC transporter ACPL_7969 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_797 PF00347 Ribosomal protein L6 ACPL_7970 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_7971 PF12849 PBP superfamily domain ACPL_7972 PF00583 Acetyltransferase (GNAT) family ACPL_7973 PF00486 Transcriptional regulatory protein, C terminal ACPL_7976 PF00581 Rhodanese-like domain ACPL_7977 PF07210 Protein of unknown function (DUF1416) ACPL_798 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ACPL_7980 PF13367 PrsW family intramembrane metalloprotease ACPL_7982 PF01594 AI-2E family transporter ACPL_7984 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ACPL_7984 PF01266 FAD dependent oxidoreductase ACPL_7986 PF00118 TCP-1/cpn60 chaperonin family ACPL_7989 PF00291 Pyridoxal-phosphate dependent enzyme ACPL_799 PF00333 Ribosomal protein S5, N-terminal domain ACPL_799 PF03719 Ribosomal protein S5, C-terminal domain ACPL_7991 PF00005 ABC transporter ACPL_7992 PF01434 Peptidase family M41 ACPL_7992 PF00004 ATPase family associated with various cellular activities (AAA) ACPL_7992 PF17862 AAA+ lid domain ACPL_7992 PF06480 FtsH Extracellular ACPL_7995 PF00005 ABC transporter ACPL_7996 PF08220 DeoR-like helix-turn-helix domain ACPL_7996 PF00455 DeoR C terminal sensor domain ACPL_7998 PF00480 ROK family ACPL_7999 PF01979 Amidohydrolase family ACPL_800 PF00327 Ribosomal protein L30p/L7e ACPL_8000 PF00005 ABC transporter ACPL_8003 PF00196 Bacterial regulatory proteins, luxR family ACPL_8003 PF00072 Response regulator receiver domain ACPL_801 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ACPL_8012 PF00583 Acetyltransferase (GNAT) family ACPL_8014 PF00005 ABC transporter ACPL_8014 PF03459 TOBE domain ACPL_8014 PF17912 MalK OB fold domain ACPL_8019 PF00588 SpoU rRNA Methylase family ACPL_8019 PF08032 RNA 2'-O ribose methyltransferase substrate binding ACPL_802 PF00344 SecY translocase ACPL_8020 PF09190 DALR domain ACPL_8020 PF01406 tRNA synthetases class I (C) catalytic domain ACPL_8021 PF00082 Subtilase family ACPL_8022 PF00206 Lyase ACPL_8022 PF10415 Fumarase C C-terminus ACPL_8023 PF03704 Bacterial transcriptional activator domain ACPL_8023 PF00931 NB-ARC domain ACPL_8023 PF00486 Transcriptional regulatory protein, C terminal ACPL_8025 PF05683 Fumarase C-terminus ACPL_8025 PF05681 Fumarate hydratase (Fumerase) ACPL_8028 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ACPL_803 PF05191 Adenylate kinase, active site lid ACPL_8030 PF00155 Aminotransferase class I and II ACPL_8032 PF00480 ROK family ACPL_8036 PF02542 YgbB family ACPL_8037 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ACPL_8038 PF02559 CarD-like/TRCF domain ACPL_804 PF00557 Metallopeptidase family M24 ACPL_8041 PF02797 Chalcone and stilbene synthases, C-terminal domain ACPL_8041 PF00195 Chalcone and stilbene synthases, N-terminal domain ACPL_8042 PF08241 Methyltransferase domain ACPL_8045 PF18073 Rubredoxin metal binding domain ACPL_8045 PF06745 KaiC ACPL_8046 PF10635 DisA bacterial checkpoint controller linker region ACPL_8046 PF02457 DisA bacterial checkpoint controller nucleotide-binding ACPL_8046 PF12826 Helix-hairpin-helix motif ACPL_8051 PF00633 Helix-hairpin-helix motif ACPL_8051 PF10576 Iron-sulfur binding domain of endonuclease III ACPL_8051 PF00730 HhH-GPD superfamily base excision DNA repair protein ACPL_8056 PF17871 AAA lid domain ACPL_8056 PF00004 ATPase family associated with various cellular activities (AAA) ACPL_8056 PF10431 C-terminal, D2-small domain, of ClpB protein ACPL_8056 PF02861 Clp amino terminal domain, pathogenicity island component ACPL_8056 PF07724 AAA domain (Cdc48 subfamily) ACPL_8057 PF11774 Lsr2 ACPL_8058 PF00152 tRNA synthetases class II (D, K and N) ACPL_8058 PF01336 OB-fold nucleic acid binding domain ACPL_8059 PF03309 Type III pantothenate kinase ACPL_806 PF01176 Translation initiation factor 1A / IF-1 ACPL_8060 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ACPL_8060 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ACPL_8061 PF00890 FAD binding domain ACPL_8061 PF02910 Fumarate reductase flavoprotein C-term ACPL_8063 PF02261 Aspartate decarboxylase ACPL_8064 PF02569 Pantoate-beta-alanine ligase ACPL_8067 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ACPL_807 PF00444 Ribosomal protein L36 ACPL_8070 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_8071 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_8072 PF00005 ABC transporter ACPL_8072 PF00571 CBS domain ACPL_8077 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ACPL_8078 PF02152 Dihydroneopterin aldolase ACPL_8079 PF00809 Pterin binding enzyme ACPL_808 PF00416 Ribosomal protein S13/S18 ACPL_8084 PF10145 Phage-related minor tail protein ACPL_8084 PF01551 Peptidase family M23 ACPL_8084 PF01464 Transglycosylase SLT domain ACPL_8086 PF01580 FtsK/SpoIIIE family ACPL_8089 PF01227 GTP cyclohydrolase I ACPL_809 PF00411 Ribosomal protein S11 ACPL_8090 PF01434 Peptidase family M41 ACPL_8090 PF00004 ATPase family associated with various cellular activities (AAA) ACPL_8090 PF17862 AAA+ lid domain ACPL_8092 PF09179 TilS substrate binding domain ACPL_8092 PF01171 PP-loop family ACPL_8094 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family ACPL_8095 PF00719 Inorganic pyrophosphatase ACPL_8097 PF01580 FtsK/SpoIIIE family ACPL_8099 PF02674 Colicin V production protein ACPL_810 PF00163 Ribosomal protein S4/S9 N-terminal domain ACPL_810 PF01479 S4 domain ACPL_8100 PF00293 NUDIX domain ACPL_8101 PF08534 Redoxin ACPL_8102 PF00730 HhH-GPD superfamily base excision DNA repair protein ACPL_8102 PF00633 Helix-hairpin-helix motif ACPL_8102 PF10576 Iron-sulfur binding domain of endonuclease III ACPL_8103 PF09587 Bacterial capsule synthesis protein PGA_cap ACPL_8104 PF00027 Cyclic nucleotide-binding domain ACPL_8104 PF13545 Crp-like helix-turn-helix domain ACPL_8106 PF02785 Biotin carboxylase C-terminal domain ACPL_8106 PF00289 Biotin carboxylase, N-terminal domain ACPL_8106 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ACPL_8107 PF00069 Protein kinase domain ACPL_8107 PF13191 AAA ATPase domain ACPL_8108 PF00072 Response regulator receiver domain ACPL_8108 PF00211 Adenylate and Guanylate cyclase catalytic domain ACPL_811 PF01000 RNA polymerase Rpb3/RpoA insert domain ACPL_811 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ACPL_811 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ACPL_8113 PF02374 Anion-transporting ATPase ACPL_8114 PF17886 HSP20-like domain found in ArsA ACPL_8114 PF02374 Anion-transporting ATPase ACPL_8115 PF02467 Transcription factor WhiB ACPL_8116 PF00905 Penicillin binding protein transpeptidase domain ACPL_8116 PF17092 Penicillin-binding protein OB-like domain ACPL_8116 PF00912 Transglycosylase ACPL_8117 PF09424 Yqey-like protein ACPL_8118 PF00149 Calcineurin-like phosphoesterase ACPL_812 PF01196 Ribosomal protein L17 ACPL_8120 PF00156 Phosphoribosyl transferase domain ACPL_8121 PF01118 Semialdehyde dehydrogenase, NAD binding domain ACPL_8121 PF02774 Semialdehyde dehydrogenase, dimerisation domain ACPL_8122 PF01842 ACT domain ACPL_8122 PF00696 Amino acid kinase family ACPL_8122 PF13840 ACT domain ACPL_8124 PF08502 LeuA allosteric (dimerisation) domain ACPL_8124 PF00682 HMGL-like ACPL_8127 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ACPL_8127 PF00005 ABC transporter ACPL_8128 PF00005 ABC transporter ACPL_8128 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ACPL_8129 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_813 PF01416 tRNA pseudouridine synthase ACPL_8130 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ACPL_8131 PF12911 N-terminal TM domain of oligopeptide transport permease C ACPL_8131 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_8132 PF13662 Toprim domain ACPL_8132 PF00633 Helix-hairpin-helix motif ACPL_8132 PF02132 RecR protein ACPL_8133 PF02575 YbaB/EbfC DNA-binding family ACPL_8134 PF12169 DNA polymerase III subunits gamma and tau domain III ACPL_8137 PF01048 Phosphorylase superfamily ACPL_8138 PF14437 MafB19-like deaminase ACPL_8142 PF02153 Prephenate dehydrogenase ACPL_8143 PF04978 Protein of unknown function (DUF664) ACPL_8144 PF01008 Initiation factor 2 subunit family ACPL_8144 PF00596 Class II Aldolase and Adducin N-terminal domain ACPL_8145 PF01435 Peptidase family M48 ACPL_8146 PF02811 PHP domain ACPL_8146 PF14716 Helix-hairpin-helix domain ACPL_8146 PF14791 DNA polymerase beta thumb ACPL_8149 PF00512 His Kinase A (phospho-acceptor) domain ACPL_8149 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_8149 PF08521 Two-component sensor kinase N-terminal ACPL_815 PF05175 Methyltransferase small domain ACPL_8150 PF03259 Roadblock/LC7 domain ACPL_8155 PF02350 UDP-N-acetylglucosamine 2-epimerase ACPL_8159 PF00440 Bacterial regulatory proteins, tetR family ACPL_816 PF00005 ABC transporter ACPL_8160 PF02839 Carbohydrate binding domain ACPL_8162 PF07690 Major Facilitator Superfamily ACPL_8163 PF00072 Response regulator receiver domain ACPL_8163 PF00990 Diguanylate cyclase, GGDEF domain ACPL_817 PF02581 Thiamine monophosphate synthase ACPL_8172 PF00881 Nitroreductase family ACPL_8174 PF01259 SAICAR synthetase ACPL_8177 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading ACPL_8178 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_8178 PF00672 HAMP domain ACPL_8178 PF00512 His Kinase A (phospho-acceptor) domain ACPL_8179 PF00072 Response regulator receiver domain ACPL_8179 PF00486 Transcriptional regulatory protein, C terminal ACPL_818 PF05690 Thiazole biosynthesis protein ThiG ACPL_818 PF01266 FAD dependent oxidoreductase ACPL_8181 PF04389 Peptidase family M28 ACPL_8181 PF01447 Thermolysin metallopeptidase, catalytic domain ACPL_8181 PF02868 Thermolysin metallopeptidase, alpha-helical domain ACPL_8182 PF02632 BioY family ACPL_8187 PF00248 Aldo/keto reductase family ACPL_8190 PF00005 ABC transporter ACPL_8192 PF08281 Sigma-70, region 4 ACPL_8192 PF04542 Sigma-70 region 2 ACPL_8196 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ACPL_8196 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ACPL_8197 PF01568 Molydopterin dinucleotide binding domain ACPL_8197 PF00384 Molybdopterin oxidoreductase ACPL_8197 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ACPL_8199 PF00141 Peroxidase ACPL_820 PF05690 Thiazole biosynthesis protein ThiG ACPL_8200 PF00144 Beta-lactamase ACPL_8201 PF00265 Thymidine kinase ACPL_8203 PF00012 Hsp70 protein ACPL_821 PF02581 Thiamine monophosphate synthase ACPL_821 PF17792 ThiD2 family ACPL_8210 PF15975 Flotillin ACPL_8210 PF01145 SPFH domain / Band 7 family ACPL_8212 PF13936 Helix-turn-helix domain ACPL_8214 PF02839 Carbohydrate binding domain ACPL_8215 PF17154 Gammaproteobacterial periplasmic sensor domain ACPL_8215 PF00990 Diguanylate cyclase, GGDEF domain ACPL_8215 PF00672 HAMP domain ACPL_8215 PF00563 EAL domain ACPL_822 PF08543 Phosphomethylpyrimidine kinase ACPL_8220 PF00113 Enolase, C-terminal TIM barrel domain ACPL_8220 PF03952 Enolase, N-terminal domain ACPL_8221 PF13411 MerR HTH family regulatory protein ACPL_8227 PF08448 PAS fold ACPL_8227 PF00512 His Kinase A (phospho-acceptor) domain ACPL_8227 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_8227 PF13188 PAS domain ACPL_8227 PF00072 Response regulator receiver domain ACPL_8229 PF01740 STAS domain ACPL_823 PF13667 ThiC-associated domain ACPL_823 PF01964 Radical SAM ThiC family ACPL_8231 PF13276 HTH-like domain ACPL_8231 PF00665 Integrase core domain ACPL_8231 PF13333 Integrase core domain ACPL_8232 PF00665 Integrase core domain ACPL_8234 PF13333 Integrase core domain ACPL_8234 PF13276 HTH-like domain ACPL_8234 PF00665 Integrase core domain ACPL_8236 PF06259 Alpha/beta hydrolase ACPL_8248 PF00175 Oxidoreductase NAD-binding domain ACPL_8248 PF00111 2Fe-2S iron-sulfur cluster binding domain ACPL_8248 PF00970 Oxidoreductase FAD-binding domain ACPL_8249 PF01327 Polypeptide deformylase ACPL_8253 PF01161 Phosphatidylethanolamine-binding protein ACPL_8256 PF14765 Polyketide synthase dehydratase ACPL_8256 PF02801 Beta-ketoacyl synthase, C-terminal domain ACPL_8256 PF00550 Phosphopantetheine attachment site ACPL_8256 PF00698 Acyl transferase domain ACPL_8256 PF08240 Alcohol dehydrogenase GroES-like domain ACPL_8256 PF00107 Zinc-binding dehydrogenase ACPL_8256 PF16197 Ketoacyl-synthetase C-terminal extension ACPL_8256 PF00109 Beta-ketoacyl synthase, N-terminal domain ACPL_8256 PF08659 KR domain ACPL_8260 PF09278 MerR, DNA binding ACPL_8260 PF00376 MerR family regulatory protein ACPL_8261 PF00456 Transketolase, thiamine diphosphate binding domain ACPL_8262 PF02779 Transketolase, pyrimidine binding domain ACPL_8266 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ACPL_8269 PF01544 CorA-like Mg2+ transporter protein ACPL_8270 PF00155 Aminotransferase class I and II ACPL_8270 PF00392 Bacterial regulatory proteins, gntR family ACPL_8272 PF00465 Iron-containing alcohol dehydrogenase ACPL_8275 PF13439 Glycosyltransferase Family 4 ACPL_8276 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ACPL_8276 PF06827 Zinc finger found in FPG and IleRS ACPL_8277 PF02397 Bacterial sugar transferase ACPL_8279 PF06580 Histidine kinase ACPL_8279 PF07694 5TMR of 5TMR-LYT ACPL_8279 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_8280 PF00072 Response regulator receiver domain ACPL_8280 PF04397 LytTr DNA-binding domain ACPL_8281 PF00072 Response regulator receiver domain ACPL_8281 PF00486 Transcriptional regulatory protein, C terminal ACPL_8282 PF00672 HAMP domain ACPL_8282 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_8282 PF00512 His Kinase A (phospho-acceptor) domain ACPL_8285 PF00474 Sodium:solute symporter family ACPL_8287 PF13732 Domain of unknown function (DUF4162) ACPL_8287 PF00005 ABC transporter ACPL_829 PF03259 Roadblock/LC7 domain ACPL_8293 PF00474 Sodium:solute symporter family ACPL_8294 PF03816 Cell envelope-related transcriptional attenuator domain ACPL_8296 PF03009 Glycerophosphoryl diester phosphodiesterase family ACPL_8297 PF00672 HAMP domain ACPL_8297 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_8297 PF18698 Histidine kinase sensor domain ACPL_8297 PF00512 His Kinase A (phospho-acceptor) domain ACPL_8304 PF01842 ACT domain ACPL_8304 PF00800 Prephenate dehydratase ACPL_8306 PF02566 OsmC-like protein ACPL_8308 PF02403 Seryl-tRNA synthetase N-terminal domain ACPL_8308 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ACPL_8311 PF10759 Protein of unknown function (DUF2587) ACPL_8313 PF01037 Lrp/AsnC ligand binding domain ACPL_8316 PF12804 MobA-like NTP transferase domain ACPL_8317 PF02634 FdhD/NarQ family ACPL_8321 PF06463 Molybdenum Cofactor Synthesis C ACPL_8321 PF04055 Radical SAM superfamily ACPL_8323 PF00149 Calcineurin-like phosphoesterase ACPL_8324 PF13361 UvrD-like helicase C-terminal domain ACPL_8324 PF00580 UvrD/REP helicase N-terminal domain ACPL_833 PF00572 Ribosomal protein L13 ACPL_8330 PF02391 MoaE protein ACPL_8332 PF00994 Probable molybdopterin binding domain ACPL_8332 PF01967 MoaC family ACPL_8333 PF01967 MoaC family ACPL_8334 PF00990 Diguanylate cyclase, GGDEF domain ACPL_8334 PF08448 PAS fold ACPL_8334 PF00563 EAL domain ACPL_8334 PF08447 PAS fold ACPL_8338 PF03796 DnaB-like helicase C terminal domain ACPL_8338 PF00772 DnaB-like helicase N terminal domain ACPL_834 PF00380 Ribosomal protein S9/S16 ACPL_8342 PF03948 Ribosomal protein L9, C-terminal domain ACPL_8342 PF01281 Ribosomal protein L9, N-terminal domain ACPL_8343 PF01084 Ribosomal protein S18 ACPL_8344 PF00436 Single-strand binding protein family ACPL_8345 PF01250 Ribosomal protein S6 ACPL_8347 PF01261 Xylose isomerase-like TIM barrel ACPL_835 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ACPL_835 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ACPL_835 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ACPL_835 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ACPL_8350 PF00912 Transglycosylase ACPL_8350 PF00905 Penicillin binding protein transpeptidase domain ACPL_8351 PF17249 Family of unknown function (DUF5318) ACPL_8352 PF03551 Transcriptional regulator PadR-like family ACPL_8353 PF01658 Myo-inositol-1-phosphate synthase ACPL_8356 PF08245 Mur ligase middle domain ACPL_836 PF00155 Aminotransferase class I and II ACPL_8360 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ACPL_8360 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ACPL_8365 PF12627 Probable RNA and SrmB- binding site of polymerase A ACPL_8365 PF01743 Poly A polymerase head domain ACPL_8365 PF13735 tRNA nucleotidyltransferase domain 2 putative ACPL_8368 PF00069 Protein kinase domain ACPL_8368 PF03793 PASTA domain ACPL_8369 PF04542 Sigma-70 region 2 ACPL_8369 PF08281 Sigma-70, region 4 ACPL_8371 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACPL_8372 PF00085 Thioredoxin ACPL_8373 PF01471 Putative peptidoglycan binding domain ACPL_8373 PF01520 N-acetylmuramoyl-L-alanine amidase ACPL_8375 PF00155 Aminotransferase class I and II ACPL_8376 PF07478 D-ala D-ala ligase C-terminus ACPL_8376 PF01820 D-ala D-ala ligase N-terminus ACPL_8379 PF17762 HTH domain found in ParB protein ACPL_8379 PF02195 ParB-like nuclease domain ACPL_838 PF01380 SIS domain ACPL_8380 PF13614 AAA domain ACPL_8381 PF02527 rRNA small subunit methyltransferase G ACPL_8383 PF02096 60Kd inner membrane protein ACPL_8384 PF00825 Ribonuclease P ACPL_8385 PF00468 Ribosomal protein L34 ACPL_842 PF01648 4'-phosphopantetheinyl transferase superfamily ACPL_843 PF01256 Carbohydrate kinase ACPL_843 PF03853 YjeF-related protein N-terminus ACPL_844 PF01168 Alanine racemase, N-terminal domain ACPL_844 PF00842 Alanine racemase, C-terminal domain ACPL_845 PF00561 alpha/beta hydrolase fold ACPL_846 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ACPL_847 PF03167 Uracil DNA glycosylase superfamily ACPL_848 PF00814 Glycoprotease family ACPL_850 PF00814 Glycoprotease family ACPL_852 PF00005 ABC transporter ACPL_852 PF00664 ABC transporter transmembrane region ACPL_853 PF00005 ABC transporter ACPL_853 PF00664 ABC transporter transmembrane region ACPL_854 PF00118 TCP-1/cpn60 chaperonin family ACPL_855 PF00166 Chaperonin 10 Kd subunit ACPL_857 PF04073 Aminoacyl-tRNA editing domain ACPL_858 PF13407 Periplasmic binding protein domain ACPL_859 PF00005 ABC transporter ACPL_860 PF02653 Branched-chain amino acid transport system / permease component ACPL_861 PF00480 ROK family ACPL_866 PF02467 Transcription factor WhiB ACPL_867 PF00196 Bacterial regulatory proteins, luxR family ACPL_867 PF00072 Response regulator receiver domain ACPL_868 PF17252 Family of unknown function (DUF5319) ACPL_869 PF00478 IMP dehydrogenase / GMP reductase domain ACPL_869 PF00571 CBS domain ACPL_870 PF00478 IMP dehydrogenase / GMP reductase domain ACPL_871 PF11838 ERAP1-like C-terminal domain ACPL_871 PF01433 Peptidase family M1 domain ACPL_872 PF03816 Cell envelope-related transcriptional attenuator domain ACPL_873 PF00117 Glutamine amidotransferase class-I ACPL_873 PF00958 GMP synthase C terminal domain ACPL_873 PF02540 NAD synthase ACPL_874 PF00293 NUDIX domain ACPL_875 PF00293 NUDIX domain ACPL_876 PF01066 CDP-alcohol phosphatidyltransferase ACPL_877 PF02666 Phosphatidylserine decarboxylase ACPL_880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACPL_880 PF07730 Histidine kinase ACPL_880 PF13492 GAF domain ACPL_881 PF00196 Bacterial regulatory proteins, luxR family ACPL_881 PF00072 Response regulator receiver domain ACPL_882 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ACPL_883 PF00528 Binding-protein-dependent transport system inner membrane component ACPL_885 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ACPL_885 PF00005 ABC transporter ACPL_886 PF00005 ABC transporter ACPL_886 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ACPL_887 PF01817 Chorismate mutase type II ACPL_888 PF00565 Staphylococcal nuclease homologue ACPL_888 PF02872 5'-nucleotidase, C-terminal domain ACPL_888 PF00149 Calcineurin-like phosphoesterase ACPL_888 PF00746 LPXTG cell wall anchor motif ACPL_889 PF00580 UvrD/REP helicase N-terminal domain ACPL_889 PF13361 UvrD-like helicase C-terminal domain ACPL_890 PF01551 Peptidase family M23 ACPL_891 PF01551 Peptidase family M23 ACPL_891 PF08460 Bacterial SH3 domain ACPL_892 PF02310 B12 binding domain ACPL_893 PF08442 ATP-grasp domain ACPL_893 PF00549 CoA-ligase ACPL_894 PF02629 CoA binding domain ACPL_894 PF00549 CoA-ligase ACPL_896 PF00551 Formyl transferase ACPL_897 PF02142 MGS-like domain ACPL_897 PF01808 AICARFT/IMPCHase bienzyme ACPL_900 PF00180 Isocitrate/isopropylmalate dehydrogenase ACPL_901 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain ACPL_901 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain ACPL_902 PF00455 DeoR C terminal sensor domain ACPL_902 PF08220 DeoR-like helix-turn-helix domain ACPL_905 PF03808 Glycosyl transferase WecB/TagA/CpsF family ACPL_914 PF13807 G-rich domain on putative tyrosine kinase ACPL_914 PF02706 Chain length determinant protein ACPL_914 PF13614 AAA domain ACPL_917 PF00005 ABC transporter ACPL_919 PF00005 ABC transporter ACPL_921 PF01022 Bacterial regulatory protein, arsR family ACPL_922 PF08240 Alcohol dehydrogenase GroES-like domain ACPL_922 PF00107 Zinc-binding dehydrogenase ACPL_923 PF00109 Beta-ketoacyl synthase, N-terminal domain ACPL_923 PF00107 Zinc-binding dehydrogenase ACPL_923 PF08240 Alcohol dehydrogenase GroES-like domain ACPL_923 PF00698 Acyl transferase domain ACPL_923 PF02801 Beta-ketoacyl synthase, C-terminal domain ACPL_923 PF16197 Ketoacyl-synthetase C-terminal extension ACPL_923 PF14765 Polyketide synthase dehydratase ACPL_923 PF00550 Phosphopantetheine attachment site ACPL_923 PF08659 KR domain ACPL_925 PF00311 Phosphoenolpyruvate carboxylase ACPL_926 PF00551 Formyl transferase ACPL_926 PF02911 Formyl transferase, C-terminal domain ACPL_926 PF00378 Enoyl-CoA hydratase/isomerase ACPL_927 PF00271 Helicase conserved C-terminal domain ACPL_927 PF00270 DEAD/DEAH box helicase ACPL_927 PF02559 CarD-like/TRCF domain ACPL_927 PF03461 TRCF domain ACPL_927 PF17757 UvrB interaction domain ACPL_929 PF03819 MazG nucleotide pyrophosphohydrolase domain ACPL_933 PF00113 Enolase, C-terminal TIM barrel domain ACPL_933 PF03952 Enolase, N-terminal domain ACPL_936 PF00583 Acetyltransferase (GNAT) family ACPL_937 PF02541 Ppx/GppA phosphatase family ACPL_939 PF03167 Uracil DNA glycosylase superfamily ACPL_942 PF17863 AAA lid domain ACPL_942 PF07726 ATPase family associated with various cellular activities (AAA) ACPL_948 PF02803 Thiolase, C-terminal domain ACPL_948 PF00108 Thiolase, N-terminal domain ACPL_952 PF00571 CBS domain ACPL_952 PF00291 Pyridoxal-phosphate dependent enzyme ACPL_953 PF13180 PDZ domain ACPL_955 PF00583 Acetyltransferase (GNAT) family ACPL_956 PF12706 Beta-lactamase superfamily domain ACPL_956 PF00753 Metallo-beta-lactamase superfamily ACPL_957 PF03976 Polyphosphate kinase 2 (PPK2) ACPL_958 PF05235 CHAD domain ACPL_958 PF01928 CYTH domain ACPL_962 PF01625 Peptide methionine sulfoxide reductase ACPL_963 PF01230 HIT domain ACPL_964 PF01053 Cys/Met metabolism PLP-dependent enzyme ACPL_965 PF01425 Amidase ACPL_966 PF13291 ACT domain ACPL_966 PF00291 Pyridoxal-phosphate dependent enzyme ACPL_967 PF01435 Peptidase family M48 ACPL_968 PF03449 Transcription elongation factor, N-terminal ACPL_968 PF01272 Transcription elongation factor, GreA/GreB, C-term ACPL_970 PF02585 GlcNAc-PI de-N-acetylase ACPL_972 PF00990 Diguanylate cyclase, GGDEF domain ACPL_972 PF03707 Bacterial signalling protein N terminal repeat ACPL_972 PF00563 EAL domain ACPL_974 PF03190 Protein of unknown function, DUF255 ACPL_975 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ACPL_975 PF02222 ATP-grasp domain ACPL_976 PF00731 AIR carboxylase ACPL_978 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACPL_978 PF02770 Acyl-CoA dehydrogenase, middle domain ACPL_978 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACPL_985 PF08448 PAS fold ACPL_985 PF08447 PAS fold ACPL_985 PF00990 Diguanylate cyclase, GGDEF domain ACPL_985 PF00563 EAL domain ACPL_989 PF12704 MacB-like periplasmic core domain ACPL_989 PF00005 ABC transporter ACPL_989 PF02687 FtsX-like permease family ACPL_991 PF03704 Bacterial transcriptional activator domain ACPL_991 PF00486 Transcriptional regulatory protein, C terminal ACPL_991 PF00931 NB-ARC domain ACPL_994 PF08502 LeuA allosteric (dimerisation) domain ACPL_994 PF00682 HMGL-like ACPL_996 PF17837 4'-phosphopantetheinyl transferase N-terminal domain ACPL_996 PF01648 4'-phosphopantetheinyl transferase superfamily ACPL_999 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ACPL_999 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain