ACPL_1008 SM00382 ATPases associated with a variety of cellular activities ACPL_1010 SM00862 Transcriptional regulatory protein, C terminal ACPL_1010 SM01043 Bacterial transcriptional activator domain ACPL_1012 SM00923 MbtH-like protein ACPL_1013 SM00823 Phosphopantetheine attachment site ACPL_1014 SM00823 Phosphopantetheine attachment site ACPL_1019 SM00824 Thioesterase ACPL_1020 SM00923 MbtH-like protein ACPL_1022 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ACPL_1032 SM00530 Helix-turn-helix XRE-family like proteins ACPL_1034 SM00354 helix_turn _helix lactose operon repressor ACPL_1035 SM00458 Ricin-type beta-trefoil ACPL_1036 SM00606 Cellulose Binding Domain Type IV ACPL_1037 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACPL_1050 SM00729 Elongator protein 3, MiaB family, Radical SAM ACPL_1057 SM00862 Transcriptional regulatory protein, C terminal ACPL_1066 SM00448 cheY-homologous receiver domain ACPL_1066 SM00862 Transcriptional regulatory protein, C terminal ACPL_1067 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPL_1067 SM00387 Histidine kinase-like ATPases ACPL_1067 SM00388 His Kinase A (phosphoacceptor) domain ACPL_1072 SM00957 SecA DEAD-like domain ACPL_1072 SM00958 SecA preprotein cross-linking domain ACPL_1078 SM00937 ACPL_1078 ACPL_1079 SM00382 ATPases associated with a variety of cellular activities ACPL_1083 SM00637 ACPL_1083 ACPL_1084 SM00857 Resolvase, N terminal domain ACPL_1089 SM00530 Helix-turn-helix XRE-family like proteins ACPL_1109 SM00495 Chitin-binding domain type 3 ACPL_1110 SM00530 Helix-turn-helix XRE-family like proteins ACPL_1111 SM00530 Helix-turn-helix XRE-family like proteins ACPL_1114 SM01002 Alanine dehydrogenase/PNT, C-terminal domain ACPL_1114 SM01003 Alanine dehydrogenase/PNT, N-terminal domain ACPL_1120 SM00448 cheY-homologous receiver domain ACPL_1124 SM00842 Cell division protein FtsA ACPL_1128 SM00382 ATPases associated with a variety of cellular activities ACPL_1129 SM00382 ATPases associated with a variety of cellular activities ACPL_1130 SM00342 helix_turn_helix, arabinose operon control protein ACPL_1134 SM00052 Putative diguanylate phosphodiesterase ACPL_1134 SM00267 diguanylate cyclase ACPL_1142 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPL_1142 SM00331 Sigma factor PP2C-like phosphatases ACPL_1143 SM00943 Bifunctional DNA primase/polymerase, N-terminal ACPL_1150 SM00052 Putative diguanylate phosphodiesterase ACPL_1150 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ACPL_1150 SM00267 diguanylate cyclase ACPL_1151 SM00347 helix_turn_helix multiple antibiotic resistance protein ACPL_1152 SM00829 Enoylreductase ACPL_116 SM00382 ATPases associated with a variety of cellular activities ACPL_116 SM00760 Bacterial dnaA protein helix-turn-helix domain ACPL_1165 SM00232 JAB/MPN domain ACPL_1169 SM00849 Metallo-beta-lactamase superfamily ACPL_117 SM00480 DNA polymerase III beta subunit ACPL_118 SM01350 ACPL_118 ACPL_1180 SM00837 Rare lipoprotein A (RlpA)-like double-psi beta-barrel ACPL_1185 SM00382 ATPases associated with a variety of cellular activities ACPL_1192 SM00479 ACPL_1192 ACPL_1196 SM00637 ACPL_1196 ACPL_1208 SM00421 helix_turn_helix, Lux Regulon ACPL_1208 SM00448 cheY-homologous receiver domain ACPL_1216 SM00091 PAS domain ACPL_1216 SM00267 diguanylate cyclase ACPL_1221 SM00530 Helix-turn-helix XRE-family like proteins ACPL_123 SM00387 Histidine kinase-like ATPases ACPL_123 SM00433 TopoisomeraseII ACPL_1230 SM00450 Rhodanese Homology Domain ACPL_1231 SM00342 helix_turn_helix, arabinose operon control protein ACPL_1236 SM00448 cheY-homologous receiver domain ACPL_124 SM00434 DNA Topoisomerase IV ACPL_1248 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPL_1248 SM00387 Histidine kinase-like ATPases ACPL_1249 SM00960 Roadblock/LC7 domain ACPL_1252 SM00354 helix_turn _helix lactose operon repressor ACPL_1254 SM00327 von Willebrand factor (vWF) type A domain ACPL_1259 SM00642 Alpha-amylase domain ACPL_1275 SM01012 ACPL_1275 ACPL_1278 SM00347 helix_turn_helix multiple antibiotic resistance protein ACPL_1281 SM00421 helix_turn_helix, Lux Regulon ACPL_1281 SM00448 cheY-homologous receiver domain ACPL_129 SM00421 helix_turn_helix, Lux Regulon ACPL_1309 SM00382 ATPases associated with a variety of cellular activities ACPL_1317 SM00507 HNH nucleases ACPL_1328 SM01134 ACPL_1328 ACPL_1334 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ACPL_1337 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. ACPL_1340 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ACPL_1355 SM00382 ATPases associated with a variety of cellular activities ACPL_1355 SM00994 ClpX C4-type zinc finger ACPL_1355 SM01086 C-terminal, D2-small domain, of ClpB protein ACPL_1365 SM00562 ACPL_1365 ACPL_1367 SM00563 Phosphate acyltransferases ACPL_1370 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPL_1370 SM00091 PAS domain ACPL_1370 SM00331 Sigma factor PP2C-like phosphatases ACPL_1372 SM00729 Elongator protein 3, MiaB family, Radical SAM ACPL_1374 SM00316 Ribosomal protein S1-like RNA-binding domain ACPL_138 SM00116 Domain in cystathionine beta-synthase and other proteins. ACPL_1382 SM00091 PAS domain ACPL_1382 SM00387 Histidine kinase-like ATPases ACPL_1382 SM00448 cheY-homologous receiver domain ACPL_1385 SM00855 Phosphoglycerate mutase family ACPL_1390 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ACPL_1398 SM00838 Elongation factor G C-terminus ACPL_140 SM00450 Rhodanese Homology Domain ACPL_1400 SM00091 PAS domain ACPL_1403 SM00729 Elongator protein 3, MiaB family, Radical SAM ACPL_1406 SM00271 DnaJ molecular chaperone homology domain ACPL_141 SM00387 Histidine kinase-like ATPases ACPL_1410 SM01217 ACPL_1410 ACPL_1415 SM00116 Domain in cystathionine beta-synthase and other proteins. ACPL_1415 SM01091 Transporter associated domain ACPL_142 SM00028 Tetratricopeptide repeats ACPL_1428 SM00382 ATPases associated with a variety of cellular activities ACPL_1434 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ACPL_1436 SM00382 ATPases associated with a variety of cellular activities ACPL_144 SM00878 Biotin carboxylase C-terminal domain ACPL_1447 SM00960 Roadblock/LC7 domain ACPL_1451 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACPL_1451 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPL_1452 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ACPL_1453 SM00400 zinc finger ACPL_1453 SM00493 ACPL_1453 ACPL_1453 SM00766 DNA primase DnaG DnaB-binding ACPL_1455 SM00382 ATPases associated with a variety of cellular activities ACPL_1473 SM00422 helix_turn_helix, mercury resistance ACPL_1477 SM00458 Ricin-type beta-trefoil ACPL_1479 SM00560 LamG-like jellyroll fold domain ACPL_1485 SM00260 Two component signalling adaptor domain ACPL_1486 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ACPL_1486 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACPL_1489 SM00466 SET and RING finger associated domain. Domain of unknown function in SET domain containing proteins and in Deinococcus radiodurans DRA1533. ACPL_1489 SM00507 HNH nucleases ACPL_150 SM00530 Helix-turn-helix XRE-family like proteins ACPL_1504 SM00836 DALR anticodon binding domain ACPL_1504 SM01016 Arginyl tRNA synthetase N terminal dom ACPL_1507 SM00422 helix_turn_helix, mercury resistance ACPL_1507 SM00871 Bacterial transcription activator, effector binding domain ACPL_1508 SM00220 Serine/Threonine protein kinases, catalytic domain ACPL_151 SM00347 helix_turn_helix multiple antibiotic resistance protein ACPL_1517 SM00947 Carbonic anhydrase ACPL_152 SM00867 YceI-like domain ACPL_1522 SM00825 Beta-ketoacyl synthase ACPL_1525 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. ACPL_1533 SM00861 Transketolase, pyrimidine binding domain ACPL_154 SM00740 ACPL_154 ACPL_1540 SM00943 Bifunctional DNA primase/polymerase, N-terminal ACPL_1541 SM00530 Helix-turn-helix XRE-family like proteins ACPL_1545 SM00855 Phosphoglycerate mutase family ACPL_1546 SM00636 ACPL_1546 ACPL_1553 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ACPL_1558 SM00859 Semialdehyde dehydrogenase, NAD binding domain ACPL_1561 SM00955 ACPL_1561 ACPL_1564 SM01230 ACPL_1564 ACPL_1571 SM00347 helix_turn_helix multiple antibiotic resistance protein ACPL_1575 SM00382 ATPases associated with a variety of cellular activities ACPL_1576 SM00862 Transcriptional regulatory protein, C terminal ACPL_1576 SM01043 Bacterial transcriptional activator domain ACPL_1578 SM01230 ACPL_1578 ACPL_160 SM00240 Forkhead associated domain ACPL_1600 SM00382 ATPases associated with a variety of cellular activities ACPL_1604 SM00382 ATPases associated with a variety of cellular activities ACPL_1604 SM00710 Parallel beta-helix repeats ACPL_1608 SM00421 helix_turn_helix, Lux Regulon ACPL_161 SM00240 Forkhead associated domain ACPL_1610 SM00729 Elongator protein 3, MiaB family, Radical SAM ACPL_162 SM00331 Sigma factor PP2C-like phosphatases ACPL_162 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain ACPL_1631 SM00382 ATPases associated with a variety of cellular activities ACPL_165 SM00220 Serine/Threonine protein kinases, catalytic domain ACPL_1658 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ACPL_1658 SM00954 Region found in RelA / SpoT proteins ACPL_1659 SM00465 GIY-YIG type nucleases (URI domain) ACPL_1659 SM00479 ACPL_1659 ACPL_166 SM00220 Serine/Threonine protein kinases, catalytic domain ACPL_166 SM00740 ACPL_166 ACPL_1665 SM00382 ATPases associated with a variety of cellular activities ACPL_1668 SM00347 helix_turn_helix multiple antibiotic resistance protein ACPL_1670 SM00421 helix_turn_helix, Lux Regulon ACPL_1670 SM00448 cheY-homologous receiver domain ACPL_1671 SM00387 Histidine kinase-like ATPases ACPL_1680 SM00563 Phosphate acyltransferases ACPL_1681 SM00100 Cyclic nucleotide-monophosphate binding domain ACPL_1681 SM00419 helix_turn_helix, cAMP Regulatory protein ACPL_1697 SM00495 Chitin-binding domain type 3 ACPL_1697 SM00636 ACPL_1697 ACPL_1700 SM00429 ig-like, plexins, transcription factors ACPL_1701 SM00429 ig-like, plexins, transcription factors ACPL_1702 SM00518 AP endonuclease family 2 ACPL_1703 SM00220 Serine/Threonine protein kinases, catalytic domain ACPL_1703 SM00740 ACPL_1703 ACPL_1711 SM00507 HNH nucleases ACPL_1713 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain ACPL_1726 SM00327 von Willebrand factor (vWF) type A domain ACPL_173 SM01091 Transporter associated domain ACPL_1735 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ACPL_174 SM00116 Domain in cystathionine beta-synthase and other proteins. ACPL_1740 SM00481 DNA polymerase alpha chain like domain ACPL_1745 SM00460 Transglutaminase/protease-like homologues ACPL_1764 SM00864 Tubulin/FtsZ family, GTPase domain ACPL_1764 SM00865 Tubulin/FtsZ family, C-terminal domain ACPL_1770 SM01152 ACPL_1770 ACPL_1776 SM00481 DNA polymerase alpha chain like domain ACPL_1778 SM00464 Found in ATP-dependent protease La (LON) ACPL_1789 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACPL_1794 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACPL_1797 SM00382 ATPases associated with a variety of cellular activities ACPL_1798 SM00382 ATPases associated with a variety of cellular activities ACPL_1799 SM00363 S4 RNA-binding domain ACPL_1799 SM01390 ACPL_1799 ACPL_181 SM00331 Sigma factor PP2C-like phosphatases ACPL_1818 SM00448 cheY-homologous receiver domain ACPL_1818 SM01012 ACPL_1818 ACPL_1822 SM00382 ATPases associated with a variety of cellular activities ACPL_1823 SM00382 ATPases associated with a variety of cellular activities ACPL_1824 SM00062 Bacterial periplasmic substrate-binding proteins ACPL_1826 SM00382 ATPases associated with a variety of cellular activities ACPL_1827 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs ACPL_1827 SM00474 3'-5' exonuclease ACPL_1827 SM00475 5'-3' exonuclease ACPL_1827 SM00482 DNA polymerase A domain ACPL_1828 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ACPL_1832 SM00316 Ribosomal protein S1-like RNA-binding domain ACPL_1834 SM00487 DEAD-like helicases superfamily ACPL_1834 SM00490 helicase superfamily c-terminal domain ACPL_184 SM00855 Phosphoglycerate mutase family ACPL_1840 SM00649 Ribosomal protein L11/L12 ACPL_1844 SM00849 Metallo-beta-lactamase superfamily ACPL_1850 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ACPL_1850 SM00465 GIY-YIG type nucleases (URI domain) ACPL_1854 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ACPL_1865 SM00861 Transketolase, pyrimidine binding domain ACPL_1874 SM00382 ATPases associated with a variety of cellular activities ACPL_1883 SM00855 Phosphoglycerate mutase family ACPL_1888 SM00382 ATPases associated with a variety of cellular activities ACPL_1891 SM00382 ATPases associated with a variety of cellular activities ACPL_1892 SM00986 Uracil DNA glycosylase superfamily ACPL_1892 SM00987 UreE urease accessory protein, C-terminal domain ACPL_1894 SM00530 Helix-turn-helix XRE-family like proteins ACPL_1899 SM00090 RIO-like kinase ACPL_1905 SM01011 Aminopeptidase P, N-terminal domain ACPL_1914 SM00327 von Willebrand factor (vWF) type A domain ACPL_1915 SM00421 helix_turn_helix, Lux Regulon ACPL_1915 SM00448 cheY-homologous receiver domain ACPL_1917 SM00822 ACPL_1917 ACPL_1927 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACPL_1931 SM00244 prohibitin homologues ACPL_194 SM00861 Transketolase, pyrimidine binding domain ACPL_1946 SM00482 DNA polymerase A domain ACPL_1947 SM01018 B12 binding domain ACPL_1954 SM00421 helix_turn_helix, Lux Regulon ACPL_1954 SM00448 cheY-homologous receiver domain ACPL_1956 SM00267 diguanylate cyclase ACPL_1964 SM00448 cheY-homologous receiver domain ACPL_1972 SM00382 ATPases associated with a variety of cellular activities ACPL_1988 SM00220 Serine/Threonine protein kinases, catalytic domain ACPL_1995 SM00116 Domain in cystathionine beta-synthase and other proteins. ACPL_1995 SM01091 Transporter associated domain ACPL_1996 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPL_1996 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACPL_2001 SM00267 diguanylate cyclase ACPL_2011 SM00387 Histidine kinase-like ATPases ACPL_2011 SM00388 His Kinase A (phosphoacceptor) domain ACPL_2012 SM00091 PAS domain ACPL_2012 SM00387 Histidine kinase-like ATPases ACPL_2012 SM00388 His Kinase A (phosphoacceptor) domain ACPL_2013 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPL_2013 SM00387 Histidine kinase-like ATPases ACPL_2013 SM00388 His Kinase A (phosphoacceptor) domain ACPL_2016 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPL_2016 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ACPL_2016 SM00091 PAS domain ACPL_2016 SM00387 Histidine kinase-like ATPases ACPL_2016 SM00388 His Kinase A (phosphoacceptor) domain ACPL_202 SM00271 DnaJ molecular chaperone homology domain ACPL_2020 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPL_2020 SM00387 Histidine kinase-like ATPases ACPL_2020 SM00388 His Kinase A (phosphoacceptor) domain ACPL_2022 SM00100 Cyclic nucleotide-monophosphate binding domain ACPL_2026 SM00894 Excalibur calcium-binding domain ACPL_203 SM00422 helix_turn_helix, mercury resistance ACPL_2033 SM00642 Alpha-amylase domain ACPL_2038 SM01130 ACPL_2038 ACPL_2039 SM00342 helix_turn_helix, arabinose operon control protein ACPL_2042 SM00382 ATPases associated with a variety of cellular activities ACPL_2046 SM00347 helix_turn_helix multiple antibiotic resistance protein ACPL_2066 SM00257 Lysin motif ACPL_2067 SM00028 Tetratricopeptide repeats ACPL_2067 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPL_2067 SM00220 Serine/Threonine protein kinases, catalytic domain ACPL_2067 SM00267 diguanylate cyclase ACPL_208 SM00382 ATPases associated with a variety of cellular activities ACPL_208 SM01086 C-terminal, D2-small domain, of ClpB protein ACPL_2083 SM00530 Helix-turn-helix XRE-family like proteins ACPL_2099 SM00729 Elongator protein 3, MiaB family, Radical SAM ACPL_2101 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ACPL_2101 SM00091 PAS domain ACPL_2101 SM00387 Histidine kinase-like ATPases ACPL_2101 SM00388 His Kinase A (phosphoacceptor) domain ACPL_2101 SM00448 cheY-homologous receiver domain ACPL_2109 SM00382 ATPases associated with a variety of cellular activities ACPL_2112 SM00267 diguanylate cyclase ACPL_2116 SM00155 Phospholipase D. Active site motifs. ACPL_2118 SM00422 helix_turn_helix, mercury resistance ACPL_212 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ACPL_2123 SM00926 Molybdopterin oxidoreductase Fe4S4 domain ACPL_213 SM01007 Class II Aldolase and Adducin N-terminal domain ACPL_2133 SM00878 Biotin carboxylase C-terminal domain ACPL_2134 SM00231 Coagulation factor 5/8 C-terminal domain, discoidin domain ACPL_2135 SM00387 Histidine kinase-like ATPases ACPL_2136 SM00960 Roadblock/LC7 domain ACPL_2139 SM00382 ATPases associated with a variety of cellular activities ACPL_2141 SM01007 Class II Aldolase and Adducin N-terminal domain ACPL_2145 SM00637 ACPL_2145 ACPL_2158 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ACPL_2159 SM00631 ACPL_2159 ACPL_2160 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACPL_2160 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPL_2161 SM00231 Coagulation factor 5/8 C-terminal domain, discoidin domain ACPL_2162 SM00354 helix_turn _helix lactose operon repressor ACPL_2167 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ACPL_2167 SM00091 PAS domain ACPL_2167 SM00387 Histidine kinase-like ATPases ACPL_2167 SM00388 His Kinase A (phosphoacceptor) domain ACPL_2167 SM00448 cheY-homologous receiver domain ACPL_2178 SM00903 Flavin reductase like domain ACPL_2181 SM00822 ACPL_2181 ACPL_2190 SM00382 ATPases associated with a variety of cellular activities ACPL_2192 SM00091 PAS domain ACPL_2192 SM00387 Histidine kinase-like ATPases ACPL_2192 SM00388 His Kinase A (phosphoacceptor) domain ACPL_2192 SM00448 cheY-homologous receiver domain ACPL_2194 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACPL_2194 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPL_2196 SM00347 helix_turn_helix multiple antibiotic resistance protein ACPL_2198 SM00421 helix_turn_helix, Lux Regulon ACPL_2198 SM00448 cheY-homologous receiver domain ACPL_2199 SM00387 Histidine kinase-like ATPases ACPL_2203 SM00260 Two component signalling adaptor domain ACPL_2205 SM00448 cheY-homologous receiver domain ACPL_2205 SM00862 Transcriptional regulatory protein, C terminal ACPL_2206 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPL_2206 SM00387 Histidine kinase-like ATPases ACPL_2206 SM00388 His Kinase A (phosphoacceptor) domain ACPL_2216 SM00257 Lysin motif ACPL_2225 SM00382 ATPases associated with a variety of cellular activities ACPL_2228 SM00382 ATPases associated with a variety of cellular activities ACPL_2230 SM00460 Transglutaminase/protease-like homologues ACPL_2231 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins ACPL_2244 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPL_2244 SM00387 Histidine kinase-like ATPases ACPL_2244 SM00388 His Kinase A (phosphoacceptor) domain ACPL_2245 SM00448 cheY-homologous receiver domain ACPL_2255 SM00342 helix_turn_helix, arabinose operon control protein ACPL_2256 SM00331 Sigma factor PP2C-like phosphatases ACPL_226 SM00788 Adenylosuccinate synthetase ACPL_2260 SM00387 Histidine kinase-like ATPases ACPL_2260 SM00388 His Kinase A (phosphoacceptor) domain ACPL_2260 SM00448 cheY-homologous receiver domain ACPL_2261 SM00331 Sigma factor PP2C-like phosphatases ACPL_2264 SM00060 Fibronectin type 3 domain ACPL_2267 SM00460 Transglutaminase/protease-like homologues ACPL_227 SM01209 ACPL_227 ACPL_227 SM01210 ACPL_227 ACPL_2272 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPL_2273 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPL_2273 SM00387 Histidine kinase-like ATPases ACPL_2273 SM00388 His Kinase A (phosphoacceptor) domain ACPL_2274 SM00448 cheY-homologous receiver domain ACPL_2287 SM00422 helix_turn_helix, mercury resistance ACPL_229 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ACPL_2290 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ACPL_2291 SM00829 Enoylreductase ACPL_2292 SM00530 Helix-turn-helix XRE-family like proteins ACPL_230 SM00998 Adenylosuccinate lyase C-terminus ACPL_2307 SM00354 helix_turn _helix lactose operon repressor ACPL_2309 SM00344 helix_turn_helix ASNC type ACPL_2313 SM01007 Class II Aldolase and Adducin N-terminal domain ACPL_2318 SM00073 Histidine Phosphotransfer domain ACPL_2318 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPL_2318 SM00387 Histidine kinase-like ATPases ACPL_2318 SM00388 His Kinase A (phosphoacceptor) domain ACPL_2318 SM00448 cheY-homologous receiver domain ACPL_2319 SM00448 cheY-homologous receiver domain ACPL_232 SM01211 ACPL_232 ACPL_2320 SM00388 His Kinase A (phosphoacceptor) domain ACPL_2324 SM00382 ATPases associated with a variety of cellular activities ACPL_2332 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain ACPL_2334 SM00320 WD40 repeats ACPL_2340 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ACPL_2346 SM00382 ATPases associated with a variety of cellular activities ACPL_2350 SM00382 ATPases associated with a variety of cellular activities ACPL_2354 SM00346 helix_turn_helix isocitrate lyase regulation ACPL_2358 SM00729 Elongator protein 3, MiaB family, Radical SAM ACPL_2359 SM00267 diguanylate cyclase ACPL_2366 SM00346 helix_turn_helix isocitrate lyase regulation ACPL_2376 SM00421 helix_turn_helix, Lux Regulon ACPL_2379 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ACPL_2379 SM00091 PAS domain ACPL_2379 SM00387 Histidine kinase-like ATPases ACPL_2379 SM00388 His Kinase A (phosphoacceptor) domain ACPL_2379 SM00448 cheY-homologous receiver domain ACPL_2380 SM00894 Excalibur calcium-binding domain ACPL_2386 SM00382 ATPases associated with a variety of cellular activities ACPL_2391 SM00116 Domain in cystathionine beta-synthase and other proteins. ACPL_2394 SM00729 Elongator protein 3, MiaB family, Radical SAM ACPL_2399 SM00448 cheY-homologous receiver domain ACPL_2401 SM00331 Sigma factor PP2C-like phosphatases ACPL_2404 SM01230 ACPL_2404 ACPL_2407 SM00382 ATPases associated with a variety of cellular activities ACPL_2408 SM00530 Helix-turn-helix XRE-family like proteins ACPL_241 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ACPL_2419 SM00822 ACPL_2419 ACPL_2423 SM00422 helix_turn_helix, mercury resistance ACPL_2428 SM00606 Cellulose Binding Domain Type IV ACPL_2428 SM01217 ACPL_2428 ACPL_2429 SM00354 helix_turn _helix lactose operon repressor ACPL_2439 SM00382 ATPases associated with a variety of cellular activities ACPL_2443 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPL_2443 SM00387 Histidine kinase-like ATPases ACPL_2443 SM00388 His Kinase A (phosphoacceptor) domain ACPL_2443 SM00448 cheY-homologous receiver domain ACPL_2446 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACPL_2446 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPL_2447 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPL_2447 SM00387 Histidine kinase-like ATPases ACPL_2447 SM00388 His Kinase A (phosphoacceptor) domain ACPL_2448 SM00448 cheY-homologous receiver domain ACPL_2453 SM00382 ATPases associated with a variety of cellular activities ACPL_2459 SM00220 Serine/Threonine protein kinases, catalytic domain ACPL_2461 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACPL_2465 SM00382 ATPases associated with a variety of cellular activities ACPL_2471 SM00422 helix_turn_helix, mercury resistance ACPL_2473 SM00448 cheY-homologous receiver domain ACPL_2474 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPL_2474 SM00387 Histidine kinase-like ATPases ACPL_2474 SM00388 His Kinase A (phosphoacceptor) domain ACPL_2476 SM00344 helix_turn_helix ASNC type ACPL_2479 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPL_2479 SM00331 Sigma factor PP2C-like phosphatases ACPL_2480 SM01217 ACPL_2480 ACPL_2484 SM00354 helix_turn _helix lactose operon repressor ACPL_2489 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACPL_2489 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPL_2497 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACPL_2497 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPL_2498 SM00267 diguanylate cyclase ACPL_2513 SM00421 helix_turn_helix, Lux Regulon ACPL_2513 SM00448 cheY-homologous receiver domain ACPL_252 SM00422 helix_turn_helix, mercury resistance ACPL_2521 SM00382 ATPases associated with a variety of cellular activities ACPL_2526 SM00829 Enoylreductase ACPL_2533 SM00530 Helix-turn-helix XRE-family like proteins ACPL_2538 SM00530 Helix-turn-helix XRE-family like proteins ACPL_2540 SM00062 Bacterial periplasmic substrate-binding proteins ACPL_2541 SM00382 ATPases associated with a variety of cellular activities ACPL_2544 SM00062 Bacterial periplasmic substrate-binding proteins ACPL_2545 SM00382 ATPases associated with a variety of cellular activities ACPL_2546 SM00052 Putative diguanylate phosphodiesterase ACPL_2546 SM00267 diguanylate cyclase ACPL_2547 SM00642 Alpha-amylase domain ACPL_2548 SM00354 helix_turn _helix lactose operon repressor ACPL_2552 SM00347 helix_turn_helix multiple antibiotic resistance protein ACPL_2553 SM00028 Tetratricopeptide repeats ACPL_2554 SM00347 helix_turn_helix multiple antibiotic resistance protein ACPL_2555 SM00382 ATPases associated with a variety of cellular activities ACPL_2562 SM00822 ACPL_2562 ACPL_2567 SM00862 Transcriptional regulatory protein, C terminal ACPL_2576 SM00382 ATPases associated with a variety of cellular activities ACPL_2577 SM00382 ATPases associated with a variety of cellular activities ACPL_2581 SM00984 UDP binding domain ACPL_2582 SM00637 ACPL_2582 ACPL_2583 SM00637 ACPL_2583 ACPL_2584 SM00637 ACPL_2584 ACPL_2603 SM00897 FIST N domain ACPL_2603 SM01204 ACPL_2603 ACPL_2604 SM00267 diguanylate cyclase ACPL_2605 SM00530 Helix-turn-helix XRE-family like proteins ACPL_261 SM00220 Serine/Threonine protein kinases, catalytic domain ACPL_2627 SM00028 Tetratricopeptide repeats ACPL_2627 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain ACPL_2641 SM00855 Phosphoglycerate mutase family ACPL_265 SM00382 ATPases associated with a variety of cellular activities ACPL_268 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ACPL_2684 SM00052 Putative diguanylate phosphodiesterase ACPL_2684 SM00267 diguanylate cyclase ACPL_2689 SM00382 ATPases associated with a variety of cellular activities ACPL_2691 SM00460 Transglutaminase/protease-like homologues ACPL_2701 SM00656 ACPL_2701 ACPL_2706 SM00903 Flavin reductase like domain ACPL_2714 SM00849 Metallo-beta-lactamase superfamily ACPL_2718 SM00829 Enoylreductase ACPL_2719 SM00052 Putative diguanylate phosphodiesterase ACPL_2726 SM00091 PAS domain ACPL_2726 SM00138 Methyltransferase, chemotaxis proteins ACPL_2736 SM00796 Allophanate hydrolase subunit 1 ACPL_2737 SM00797 Allophanate hydrolase subunit 2 ACPL_2738 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACPL_2738 SM00895 ACPL_2738 ACPL_2739 SM00458 Ricin-type beta-trefoil ACPL_2743 SM00342 helix_turn_helix, arabinose operon control protein ACPL_2748 SM00382 ATPases associated with a variety of cellular activities ACPL_2749 SM00382 ATPases associated with a variety of cellular activities ACPL_2753 SM00882 Coenzyme A transferase ACPL_2754 SM00882 Coenzyme A transferase ACPL_2758 SM00382 ATPases associated with a variety of cellular activities ACPL_2760 SM01119 ACPL_2760 ACPL_2764 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACPL_2769 SM00822 ACPL_2769 ACPL_2771 SM00052 Putative diguanylate phosphodiesterase ACPL_2771 SM00267 diguanylate cyclase ACPL_2773 SM00091 PAS domain ACPL_2773 SM00387 Histidine kinase-like ATPases ACPL_2773 SM00388 His Kinase A (phosphoacceptor) domain ACPL_2773 SM00448 cheY-homologous receiver domain ACPL_2776 SM01092 CO dehydrogenase flavoprotein C-terminal domain ACPL_2777 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ACPL_2778 SM00731 SprT homologues. ACPL_2781 SM00382 ATPases associated with a variety of cellular activities ACPL_2782 SM00419 helix_turn_helix, cAMP Regulatory protein ACPL_2783 SM00382 ATPases associated with a variety of cellular activities ACPL_2784 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACPL_2784 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPL_2789 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ACPL_2792 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ACPL_2810 SM00306 Hint (Hedgehog/Intein) domain N-terminal region ACPL_2813 SM00344 helix_turn_helix ASNC type ACPL_2815 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs ACPL_2815 SM00475 5'-3' exonuclease ACPL_2823 SM00052 Putative diguanylate phosphodiesterase ACPL_2823 SM00267 diguanylate cyclase ACPL_2826 SM00267 diguanylate cyclase ACPL_2841 SM00640 Glycosyl hydrolases family 32 ACPL_2845 SM00642 Alpha-amylase domain ACPL_2847 SM00347 helix_turn_helix multiple antibiotic resistance protein ACPL_2853 SM00382 ATPases associated with a variety of cellular activities ACPL_2858 SM00382 ATPases associated with a variety of cellular activities ACPL_2860 SM01043 Bacterial transcriptional activator domain ACPL_2863 SM01350 ACPL_2863 ACPL_2865 SM00331 Sigma factor PP2C-like phosphatases ACPL_2867 SM00062 Bacterial periplasmic substrate-binding proteins ACPL_2869 SM00052 Putative diguanylate phosphodiesterase ACPL_2869 SM00267 diguanylate cyclase ACPL_2874 SM00530 Helix-turn-helix XRE-family like proteins ACPL_2883 SM00487 DEAD-like helicases superfamily ACPL_2883 SM00490 helicase superfamily c-terminal domain ACPL_2885 SM00052 Putative diguanylate phosphodiesterase ACPL_2885 SM00267 diguanylate cyclase ACPL_2895 SM00220 Serine/Threonine protein kinases, catalytic domain ACPL_2902 SM00382 ATPases associated with a variety of cellular activities ACPL_2915 SM00382 ATPases associated with a variety of cellular activities ACPL_2926 SM00421 helix_turn_helix, Lux Regulon ACPL_2929 SM00382 ATPases associated with a variety of cellular activities ACPL_2931 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPL_2931 SM00387 Histidine kinase-like ATPases ACPL_2931 SM00388 His Kinase A (phosphoacceptor) domain ACPL_2932 SM00448 cheY-homologous receiver domain ACPL_2932 SM00862 Transcriptional regulatory protein, C terminal ACPL_2936 SM00421 helix_turn_helix, Lux Regulon ACPL_2939 SM00855 Phosphoglycerate mutase family ACPL_2940 SM01217 ACPL_2940 ACPL_2941 SM00354 helix_turn _helix lactose operon repressor ACPL_2951 SM00382 ATPases associated with a variety of cellular activities ACPL_2952 SM00382 ATPases associated with a variety of cellular activities ACPL_2958 SM00448 cheY-homologous receiver domain ACPL_2959 SM00382 ATPases associated with a variety of cellular activities ACPL_2962 SM00354 helix_turn _helix lactose operon repressor ACPL_2974 SM00220 Serine/Threonine protein kinases, catalytic domain ACPL_2976 SM00495 Chitin-binding domain type 3 ACPL_2976 SM00636 ACPL_2976 ACPL_2990 SM00327 von Willebrand factor (vWF) type A domain ACPL_2990 SM00609 Vault protein Inter-alpha-Trypsin domain ACPL_2992 SM00458 Ricin-type beta-trefoil ACPL_2995 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPL_2995 SM00387 Histidine kinase-like ATPases ACPL_2995 SM00388 His Kinase A (phosphoacceptor) domain ACPL_2998 SM00231 Coagulation factor 5/8 C-terminal domain, discoidin domain ACPL_2998 SM00612 ACPL_2998 ACPL_3003 SM00458 Ricin-type beta-trefoil ACPL_3003 SM00633 Glycosyl hydrolase family 10 ACPL_3005 SM00637 ACPL_3005 ACPL_3006 SM00458 Ricin-type beta-trefoil ACPL_3008 SM00606 Cellulose Binding Domain Type IV ACPL_3009 SM00458 Ricin-type beta-trefoil ACPL_3010 SM00633 Glycosyl hydrolase family 10 ACPL_3010 SM00637 ACPL_3010 ACPL_3011 SM00637 ACPL_3011 ACPL_3012 SM00637 ACPL_3012 ACPL_3014 SM00458 Ricin-type beta-trefoil ACPL_3014 SM00633 Glycosyl hydrolase family 10 ACPL_3018 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPL_3018 SM00387 Histidine kinase-like ATPases ACPL_3018 SM00388 His Kinase A (phosphoacceptor) domain ACPL_3019 SM00448 cheY-homologous receiver domain ACPL_3019 SM00862 Transcriptional regulatory protein, C terminal ACPL_302 SM00331 Sigma factor PP2C-like phosphatases ACPL_3023 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACPL_3023 SM00866 ACPL_3023 ACPL_3028 SM00382 ATPases associated with a variety of cellular activities ACPL_3034 SM00382 ATPases associated with a variety of cellular activities ACPL_3036 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACPL_3036 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPL_3041 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ACPL_3046 SM00347 helix_turn_helix multiple antibiotic resistance protein ACPL_3056 SM00387 Histidine kinase-like ATPases ACPL_306 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPL_306 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ACPL_306 SM00387 Histidine kinase-like ATPases ACPL_306 SM00388 His Kinase A (phosphoacceptor) domain ACPL_3071 SM00331 Sigma factor PP2C-like phosphatases ACPL_3072 SM00341 Helicase and RNase D C-terminal ACPL_3072 SM00487 DEAD-like helicases superfamily ACPL_3072 SM00490 helicase superfamily c-terminal domain ACPL_3072 SM00956 ACPL_3072 ACPL_3087 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACPL_3087 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPL_3091 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPL_3091 SM00220 Serine/Threonine protein kinases, catalytic domain ACPL_3091 SM00387 Histidine kinase-like ATPases ACPL_3091 SM00388 His Kinase A (phosphoacceptor) domain ACPL_3100 SM00984 UDP binding domain ACPL_3104 SM00344 helix_turn_helix ASNC type ACPL_3118 SM00823 Phosphopantetheine attachment site ACPL_3119 SM00823 Phosphopantetheine attachment site ACPL_3120 SM00923 MbtH-like protein ACPL_3123 SM00861 Transketolase, pyrimidine binding domain ACPL_3134 SM00342 helix_turn_helix, arabinose operon control protein ACPL_3138 SM00292 breast cancer carboxy-terminal domain ACPL_3138 SM00532 Ligase N family ACPL_3139 SM01060 ACPL_3139 ACPL_3143 SM00028 Tetratricopeptide repeats ACPL_3149 SM00255 Toll - interleukin 1 - resistance ACPL_3149 SM00320 WD40 repeats ACPL_315 SM00052 Putative diguanylate phosphodiesterase ACPL_3150 SM00320 WD40 repeats ACPL_3157 SM00878 Biotin carboxylase C-terminal domain ACPL_3177 SM00458 Ricin-type beta-trefoil ACPL_3186 SM00421 helix_turn_helix, Lux Regulon ACPL_3186 SM00448 cheY-homologous receiver domain ACPL_3205 SM00347 helix_turn_helix multiple antibiotic resistance protein ACPL_3207 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPL_3207 SM00387 Histidine kinase-like ATPases ACPL_3207 SM00388 His Kinase A (phosphoacceptor) domain ACPL_3208 SM00448 cheY-homologous receiver domain ACPL_3208 SM00862 Transcriptional regulatory protein, C terminal ACPL_3209 SM00020 Trypsin-like serine protease ACPL_3212 SM01110 ACPL_3212 ACPL_3214 SM00382 ATPases associated with a variety of cellular activities ACPL_3221 SM00327 von Willebrand factor (vWF) type A domain ACPL_3223 SM00421 helix_turn_helix, Lux Regulon ACPL_3223 SM00448 cheY-homologous receiver domain ACPL_3239 SM00052 Putative diguanylate phosphodiesterase ACPL_324 SM00382 ATPases associated with a variety of cellular activities ACPL_3242 SM00346 helix_turn_helix isocitrate lyase regulation ACPL_3243 SM00882 Coenzyme A transferase ACPL_3244 SM00882 Coenzyme A transferase ACPL_3245 SM00458 Ricin-type beta-trefoil ACPL_3245 SM00560 LamG-like jellyroll fold domain ACPL_326 SM00014 Acid phosphatase homologues ACPL_3262 SM00267 diguanylate cyclase ACPL_3263 SM00342 helix_turn_helix, arabinose operon control protein ACPL_327 SM00448 cheY-homologous receiver domain ACPL_327 SM00862 Transcriptional regulatory protein, C terminal ACPL_3272 SM00448 cheY-homologous receiver domain ACPL_3272 SM00862 Transcriptional regulatory protein, C terminal ACPL_3273 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPL_3273 SM00387 Histidine kinase-like ATPases ACPL_3273 SM00388 His Kinase A (phosphoacceptor) domain ACPL_328 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPL_328 SM00387 Histidine kinase-like ATPases ACPL_328 SM00388 His Kinase A (phosphoacceptor) domain ACPL_3282 SM00382 ATPases associated with a variety of cellular activities ACPL_3288 SM00052 Putative diguanylate phosphodiesterase ACPL_329 SM00422 helix_turn_helix, mercury resistance ACPL_3302 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain ACPL_3304 SM00052 Putative diguanylate phosphodiesterase ACPL_3304 SM00267 diguanylate cyclase ACPL_3308 SM00220 Serine/Threonine protein kinases, catalytic domain ACPL_3316 SM00458 Ricin-type beta-trefoil ACPL_3321 SM00028 Tetratricopeptide repeats ACPL_3322 SM00382 ATPases associated with a variety of cellular activities ACPL_3325 SM00235 Zinc-dependent metalloprotease ACPL_3326 SM00342 helix_turn_helix, arabinose operon control protein ACPL_3328 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPL_3328 SM00387 Histidine kinase-like ATPases ACPL_3328 SM00388 His Kinase A (phosphoacceptor) domain ACPL_3329 SM00448 cheY-homologous receiver domain ACPL_3329 SM00862 Transcriptional regulatory protein, C terminal ACPL_3336 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPL_3336 SM00331 Sigma factor PP2C-like phosphatases ACPL_3337 SM00857 Resolvase, N terminal domain ACPL_3352 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPL_3355 SM00342 helix_turn_helix, arabinose operon control protein ACPL_3362 SM00091 PAS domain ACPL_3362 SM00387 Histidine kinase-like ATPases ACPL_3362 SM00388 His Kinase A (phosphoacceptor) domain ACPL_3370 SM00020 Trypsin-like serine protease ACPL_3372 SM00306 Hint (Hedgehog/Intein) domain N-terminal region ACPL_3372 SM00458 Ricin-type beta-trefoil ACPL_3372 SM00560 LamG-like jellyroll fold domain ACPL_3374 SM00091 PAS domain ACPL_3374 SM00267 diguanylate cyclase ACPL_3376 SM00091 PAS domain ACPL_3376 SM00387 Histidine kinase-like ATPases ACPL_3376 SM00388 His Kinase A (phosphoacceptor) domain ACPL_3376 SM00448 cheY-homologous receiver domain ACPL_3377 SM00052 Putative diguanylate phosphodiesterase ACPL_3377 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPL_3377 SM00267 diguanylate cyclase ACPL_3378 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ACPL_3378 SM00091 PAS domain ACPL_3378 SM00387 Histidine kinase-like ATPases ACPL_3378 SM00388 His Kinase A (phosphoacceptor) domain ACPL_3378 SM00448 cheY-homologous receiver domain ACPL_3379 SM00448 cheY-homologous receiver domain ACPL_3380 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPL_3380 SM00331 Sigma factor PP2C-like phosphatases ACPL_3394 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain ACPL_3395 SM00091 PAS domain ACPL_3395 SM00387 Histidine kinase-like ATPases ACPL_3395 SM00388 His Kinase A (phosphoacceptor) domain ACPL_3395 SM00448 cheY-homologous receiver domain ACPL_3396 SM00062 Bacterial periplasmic substrate-binding proteins ACPL_3397 SM00267 diguanylate cyclase ACPL_3398 SM00052 Putative diguanylate phosphodiesterase ACPL_3398 SM00267 diguanylate cyclase ACPL_3409 SM00267 diguanylate cyclase ACPL_3410 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPL_3410 SM00267 diguanylate cyclase ACPL_3415 SM00052 Putative diguanylate phosphodiesterase ACPL_3415 SM00267 diguanylate cyclase ACPL_342 SM00458 Ricin-type beta-trefoil ACPL_3421 SM00387 Histidine kinase-like ATPases ACPL_3421 SM00388 His Kinase A (phosphoacceptor) domain ACPL_3421 SM00448 cheY-homologous receiver domain ACPL_3425 SM00448 cheY-homologous receiver domain ACPL_3427 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPL_3427 SM00387 Histidine kinase-like ATPases ACPL_3427 SM00388 His Kinase A (phosphoacceptor) domain ACPL_3428 SM00267 diguanylate cyclase ACPL_3429 SM00448 cheY-homologous receiver domain ACPL_3430 SM00448 cheY-homologous receiver domain ACPL_3438 SM00458 Ricin-type beta-trefoil ACPL_3440 SM00736 Dystroglycan-type cadherin-like domains. ACPL_3441 SM00267 diguanylate cyclase ACPL_3441 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPL_3442 SM00267 diguanylate cyclase ACPL_3445 SM00382 ATPases associated with a variety of cellular activities ACPL_3448 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPL_3448 SM00387 Histidine kinase-like ATPases ACPL_3448 SM00388 His Kinase A (phosphoacceptor) domain ACPL_3452 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPL_3452 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACPL_3461 SM00052 Putative diguanylate phosphodiesterase ACPL_3461 SM00267 diguanylate cyclase ACPL_3467 SM00387 Histidine kinase-like ATPases ACPL_3467 SM00388 His Kinase A (phosphoacceptor) domain ACPL_3468 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPL_3468 SM00091 PAS domain ACPL_3468 SM00387 Histidine kinase-like ATPases ACPL_3468 SM00388 His Kinase A (phosphoacceptor) domain ACPL_3470 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. ACPL_3473 SM00220 Serine/Threonine protein kinases, catalytic domain ACPL_3477 SM00448 cheY-homologous receiver domain ACPL_3478 SM00347 helix_turn_helix multiple antibiotic resistance protein ACPL_348 SM00306 Hint (Hedgehog/Intein) domain N-terminal region ACPL_348 SM00458 Ricin-type beta-trefoil ACPL_3483 SM00028 Tetratricopeptide repeats ACPL_3485 SM00347 helix_turn_helix multiple antibiotic resistance protein ACPL_3508 SM00257 Lysin motif ACPL_3508 SM01043 Bacterial transcriptional activator domain ACPL_3512 SM00267 diguanylate cyclase ACPL_3519 SM00052 Putative diguanylate phosphodiesterase ACPL_3519 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPL_3519 SM00091 PAS domain ACPL_3519 SM00267 diguanylate cyclase ACPL_3524 SM00387 Histidine kinase-like ATPases ACPL_3524 SM00388 His Kinase A (phosphoacceptor) domain ACPL_3529 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACPL_3529 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPL_3533 SM00387 Histidine kinase-like ATPases ACPL_3533 SM00388 His Kinase A (phosphoacceptor) domain ACPL_3534 SM00387 Histidine kinase-like ATPases ACPL_3534 SM00388 His Kinase A (phosphoacceptor) domain ACPL_3534 SM00448 cheY-homologous receiver domain ACPL_3538 SM00860 SMI1 / KNR4 family ACPL_3557 SM00052 Putative diguanylate phosphodiesterase ACPL_3557 SM00267 diguanylate cyclase ACPL_3560 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPL_3560 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ACPL_3560 SM00091 PAS domain ACPL_3560 SM00220 Serine/Threonine protein kinases, catalytic domain ACPL_3560 SM00387 Histidine kinase-like ATPases ACPL_3560 SM00388 His Kinase A (phosphoacceptor) domain ACPL_3561 SM00458 Ricin-type beta-trefoil ACPL_3562 SM00052 Putative diguanylate phosphodiesterase ACPL_3562 SM00267 diguanylate cyclase ACPL_3563 SM00052 Putative diguanylate phosphodiesterase ACPL_3563 SM00267 diguanylate cyclase ACPL_3567 SM00387 Histidine kinase-like ATPases ACPL_3568 SM00421 helix_turn_helix, Lux Regulon ACPL_3568 SM00448 cheY-homologous receiver domain ACPL_3578 SM00382 ATPases associated with a variety of cellular activities ACPL_3580 SM00421 helix_turn_helix, Lux Regulon ACPL_3580 SM00448 cheY-homologous receiver domain ACPL_3581 SM00267 diguanylate cyclase ACPL_3589 SM00729 Elongator protein 3, MiaB family, Radical SAM ACPL_3592 SM01209 ACPL_3592 ACPL_3597 SM00729 Elongator protein 3, MiaB family, Radical SAM ACPL_3599 SM00028 Tetratricopeptide repeats ACPL_3599 SM00862 Transcriptional regulatory protein, C terminal ACPL_3599 SM01043 Bacterial transcriptional activator domain ACPL_360 SM00331 Sigma factor PP2C-like phosphatases ACPL_360 SM00387 Histidine kinase-like ATPases ACPL_3607 SM00822 ACPL_3607 ACPL_3611 SM00248 ankyrin repeats ACPL_3614 SM00267 diguanylate cyclase ACPL_3616 SM00028 Tetratricopeptide repeats ACPL_3616 SM00862 Transcriptional regulatory protein, C terminal ACPL_3616 SM01043 Bacterial transcriptional activator domain ACPL_3617 SM00255 Toll - interleukin 1 - resistance ACPL_3617 SM00320 WD40 repeats ACPL_3621 SM00567 E-Z type HEAT repeats ACPL_3623 SM00028 Tetratricopeptide repeats ACPL_3623 SM00220 Serine/Threonine protein kinases, catalytic domain ACPL_3623 SM00320 WD40 repeats ACPL_3625 SM00028 Tetratricopeptide repeats ACPL_3625 SM00671 Sel1-like repeats. ACPL_363 SM01209 ACPL_363 ACPL_3635 SM00382 ATPases associated with a variety of cellular activities ACPL_3645 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPL_3646 SM00267 diguanylate cyclase ACPL_3647 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACPL_3647 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPL_3657 SM00347 helix_turn_helix multiple antibiotic resistance protein ACPL_3659 SM00267 diguanylate cyclase ACPL_3661 SM00052 Putative diguanylate phosphodiesterase ACPL_3663 SM00642 Alpha-amylase domain ACPL_3666 SM00382 ATPases associated with a variety of cellular activities ACPL_3683 SM00642 Alpha-amylase domain ACPL_3684 SM00632 ACPL_3684 ACPL_3684 SM00642 Alpha-amylase domain ACPL_3684 SM01065 Starch binding domain ACPL_3688 SM00458 Ricin-type beta-trefoil ACPL_3689 SM00458 Ricin-type beta-trefoil ACPL_3698 SM01118 ACPL_3698 ACPL_3699 SM00387 Histidine kinase-like ATPases ACPL_3699 SM00388 His Kinase A (phosphoacceptor) domain ACPL_3701 SM00342 helix_turn_helix, arabinose operon control protein ACPL_3702 SM00829 Enoylreductase ACPL_3707 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPL_3707 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPL_3707 SM00387 Histidine kinase-like ATPases ACPL_3707 SM00388 His Kinase A (phosphoacceptor) domain ACPL_3707 SM00448 cheY-homologous receiver domain ACPL_3709 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACPL_3709 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPL_3716 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ACPL_372 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain ACPL_3722 SM00245 tail specific protease ACPL_3723 SM00382 ATPases associated with a variety of cellular activities ACPL_3725 SM01065 Starch binding domain ACPL_3730 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACPL_3731 SM00899 ACPL_3731 ACPL_3732 SM00357 Cold shock protein domain ACPL_3734 SM00422 helix_turn_helix, mercury resistance ACPL_3735 SM00495 Chitin-binding domain type 3 ACPL_3736 SM00495 Chitin-binding domain type 3 ACPL_3741 SM00448 cheY-homologous receiver domain ACPL_3741 SM00862 Transcriptional regulatory protein, C terminal ACPL_3742 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPL_3742 SM00387 Histidine kinase-like ATPases ACPL_3742 SM00388 His Kinase A (phosphoacceptor) domain ACPL_375 SM00382 ATPases associated with a variety of cellular activities ACPL_3758 SM00729 Elongator protein 3, MiaB family, Radical SAM ACPL_3760 SM00046 Diacylglycerol kinase catalytic domain (presumed) ACPL_3767 SM00387 Histidine kinase-like ATPases ACPL_3779 SM00052 Putative diguanylate phosphodiesterase ACPL_3779 SM00267 diguanylate cyclase ACPL_3780 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ACPL_3780 SM00091 PAS domain ACPL_3780 SM00331 Sigma factor PP2C-like phosphatases ACPL_3782 SM00382 ATPases associated with a variety of cellular activities ACPL_3784 SM00062 Bacterial periplasmic substrate-binding proteins ACPL_379 SM00331 Sigma factor PP2C-like phosphatases ACPL_379 SM00448 cheY-homologous receiver domain ACPL_3790 SM00267 diguanylate cyclase ACPL_380 SM00387 Histidine kinase-like ATPases ACPL_380 SM00388 His Kinase A (phosphoacceptor) domain ACPL_3800 SM00530 Helix-turn-helix XRE-family like proteins ACPL_381 SM00331 Sigma factor PP2C-like phosphatases ACPL_3815 SM00382 ATPases associated with a variety of cellular activities ACPL_3818 SM00421 helix_turn_helix, Lux Regulon ACPL_3818 SM00448 cheY-homologous receiver domain ACPL_382 SM00387 Histidine kinase-like ATPases ACPL_3821 SM00382 ATPases associated with a variety of cellular activities ACPL_3836 SM00422 helix_turn_helix, mercury resistance ACPL_3836 SM00871 Bacterial transcription activator, effector binding domain ACPL_3841 SM00633 Glycosyl hydrolase family 10 ACPL_3849 SM00421 helix_turn_helix, Lux Regulon ACPL_3849 SM00448 cheY-homologous receiver domain ACPL_3854 SM00267 diguanylate cyclase ACPL_3855 SM00458 Ricin-type beta-trefoil ACPL_3858 SM00267 diguanylate cyclase ACPL_3864 SM00560 LamG-like jellyroll fold domain ACPL_3865 SM00458 Ricin-type beta-trefoil ACPL_3876 SM00382 ATPases associated with a variety of cellular activities ACPL_3887 SM00530 Helix-turn-helix XRE-family like proteins ACPL_3893 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. ACPL_3894 SM00331 Sigma factor PP2C-like phosphatases ACPL_3897 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins ACPL_3906 SM00347 helix_turn_helix multiple antibiotic resistance protein ACPL_3911 SM00346 helix_turn_helix isocitrate lyase regulation ACPL_3917 SM00822 ACPL_3917 ACPL_3922 SM00052 Putative diguanylate phosphodiesterase ACPL_3922 SM00267 diguanylate cyclase ACPL_3942 SM00267 diguanylate cyclase ACPL_3944 SM00342 helix_turn_helix, arabinose operon control protein ACPL_3949 SM00347 helix_turn_helix multiple antibiotic resistance protein ACPL_3961 SM00342 helix_turn_helix, arabinose operon control protein ACPL_3966 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. ACPL_397 SM00331 Sigma factor PP2C-like phosphatases ACPL_3970 SM00831 Cation transporter/ATPase, N-terminus ACPL_398 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPL_398 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPL_398 SM00387 Histidine kinase-like ATPases ACPL_398 SM00388 His Kinase A (phosphoacceptor) domain ACPL_398 SM00448 cheY-homologous receiver domain ACPL_3980 SM00320 WD40 repeats ACPL_3988 SM00642 Alpha-amylase domain ACPL_3989 SM00382 ATPases associated with a variety of cellular activities ACPL_3989 SM00421 helix_turn_helix, Lux Regulon ACPL_399 SM00448 cheY-homologous receiver domain ACPL_3991 SM00421 helix_turn_helix, Lux Regulon ACPL_4027 SM00052 Putative diguanylate phosphodiesterase ACPL_4027 SM00267 diguanylate cyclase ACPL_4029 SM00855 Phosphoglycerate mutase family ACPL_4035 SM00422 helix_turn_helix, mercury resistance ACPL_4046 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ACPL_4048 SM00448 cheY-homologous receiver domain ACPL_4049 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPL_4049 SM00387 Histidine kinase-like ATPases ACPL_4049 SM00388 His Kinase A (phosphoacceptor) domain ACPL_405 SM00855 Phosphoglycerate mutase family ACPL_4052 SM00495 Chitin-binding domain type 3 ACPL_4052 SM00636 ACPL_4052 ACPL_4055 SM00422 helix_turn_helix, mercury resistance ACPL_4055 SM00567 E-Z type HEAT repeats ACPL_4058 SM00881 CoA binding domain ACPL_4059 SM00052 Putative diguanylate phosphodiesterase ACPL_4059 SM00267 diguanylate cyclase ACPL_4069 SM00421 helix_turn_helix, Lux Regulon ACPL_4070 SM00421 helix_turn_helix, Lux Regulon ACPL_4078 SM00220 Serine/Threonine protein kinases, catalytic domain ACPL_4085 SM00382 ATPases associated with a variety of cellular activities ACPL_4095 SM00331 Sigma factor PP2C-like phosphatases ACPL_4097 SM00342 helix_turn_helix, arabinose operon control protein ACPL_4099 SM00637 ACPL_4099 ACPL_4100 SM00637 ACPL_4100 ACPL_4101 SM00947 Carbonic anhydrase ACPL_4102 SM00347 helix_turn_helix multiple antibiotic resistance protein ACPL_4110 SM00823 Phosphopantetheine attachment site ACPL_4112 SM01260 ACPL_4112 ACPL_4114 SM00421 helix_turn_helix, Lux Regulon ACPL_4115 SM00923 MbtH-like protein ACPL_4117 SM00421 helix_turn_helix, Lux Regulon ACPL_4120 SM01351 ACPL_4120 ACPL_4123 SM00823 Phosphopantetheine attachment site ACPL_4130 SM00823 Phosphopantetheine attachment site ACPL_4136 SM00421 helix_turn_helix, Lux Regulon ACPL_4137 SM00421 helix_turn_helix, Lux Regulon ACPL_4138 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ACPL_415 SM00344 helix_turn_helix ASNC type ACPL_4152 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPL_4152 SM00267 diguanylate cyclase ACPL_4153 SM00897 FIST N domain ACPL_4153 SM01204 ACPL_4153 ACPL_4155 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPL_4155 SM00387 Histidine kinase-like ATPases ACPL_4156 SM00421 helix_turn_helix, Lux Regulon ACPL_4156 SM00448 cheY-homologous receiver domain ACPL_4167 SM00382 ATPases associated with a variety of cellular activities ACPL_4171 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACPL_4171 SM00895 ACPL_4171 ACPL_4174 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACPL_4174 SM00895 ACPL_4174 ACPL_4176 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACPL_4176 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPL_4177 SM00267 diguanylate cyclase ACPL_4178 SM00267 diguanylate cyclase ACPL_418 SM00487 DEAD-like helicases superfamily ACPL_418 SM00490 helicase superfamily c-terminal domain ACPL_4185 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACPL_4185 SM00895 ACPL_4185 ACPL_4189 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACPL_4189 SM00895 ACPL_4189 ACPL_4190 SM00421 helix_turn_helix, Lux Regulon ACPL_4191 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPL_4191 SM00387 Histidine kinase-like ATPases ACPL_4191 SM00388 His Kinase A (phosphoacceptor) domain ACPL_4192 SM00448 cheY-homologous receiver domain ACPL_4192 SM00862 Transcriptional regulatory protein, C terminal ACPL_4195 SM00382 ATPases associated with a variety of cellular activities ACPL_4201 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ACPL_4205 SM00458 Ricin-type beta-trefoil ACPL_4219 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACPL_4219 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPL_4221 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPL_4239 SM00421 helix_turn_helix, Lux Regulon ACPL_4239 SM00448 cheY-homologous receiver domain ACPL_4252 SM00822 ACPL_4252 ACPL_4256 SM00450 Rhodanese Homology Domain ACPL_426 SM00382 ATPases associated with a variety of cellular activities ACPL_4260 SM00331 Sigma factor PP2C-like phosphatases ACPL_4260 SM00387 Histidine kinase-like ATPases ACPL_4262 SM00857 Resolvase, N terminal domain ACPL_4263 SM00829 Enoylreductase ACPL_4265 SM00822 ACPL_4265 ACPL_4269 SM00857 Resolvase, N terminal domain ACPL_4273 SM00226 Low molecular weight phosphatase family ACPL_4276 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ACPL_4290 SM01130 ACPL_4290 ACPL_4296 SM00382 ATPases associated with a variety of cellular activities ACPL_4299 SM00421 helix_turn_helix, Lux Regulon ACPL_4299 SM00448 cheY-homologous receiver domain ACPL_4303 SM00382 ATPases associated with a variety of cellular activities ACPL_4319 SM00829 Enoylreductase ACPL_4322 SM00530 Helix-turn-helix XRE-family like proteins ACPL_4324 SM00344 helix_turn_helix ASNC type ACPL_4325 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ACPL_433 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ACPL_4335 SM00382 ATPases associated with a variety of cellular activities ACPL_4335 SM00421 helix_turn_helix, Lux Regulon ACPL_4340 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACPL_4344 SM00563 Phosphate acyltransferases ACPL_4356 SM00347 helix_turn_helix multiple antibiotic resistance protein ACPL_4359 SM00306 Hint (Hedgehog/Intein) domain N-terminal region ACPL_4375 SM00897 FIST N domain ACPL_4375 SM01204 ACPL_4375 ACPL_4376 SM00052 Putative diguanylate phosphodiesterase ACPL_4376 SM00267 diguanylate cyclase ACPL_438 SM00487 DEAD-like helicases superfamily ACPL_438 SM00490 helicase superfamily c-terminal domain ACPL_4385 SM00382 ATPases associated with a variety of cellular activities ACPL_4390 SM00530 Helix-turn-helix XRE-family like proteins ACPL_4391 SM00822 ACPL_4391 ACPL_4417 SM00530 Helix-turn-helix XRE-family like proteins ACPL_4427 SM00347 helix_turn_helix multiple antibiotic resistance protein ACPL_4436 SM00487 DEAD-like helicases superfamily ACPL_4436 SM00490 helicase superfamily c-terminal domain ACPL_4437 SM00530 Helix-turn-helix XRE-family like proteins ACPL_4445 SM00382 ATPases associated with a variety of cellular activities ACPL_4456 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ACPL_4462 SM00855 Phosphoglycerate mutase family ACPL_4468 SM00357 Cold shock protein domain ACPL_4469 SM01234 ACPL_4469 ACPL_4471 SM00421 helix_turn_helix, Lux Regulon ACPL_4483 SM00231 Coagulation factor 5/8 C-terminal domain, discoidin domain ACPL_4488 SM00062 Bacterial periplasmic substrate-binding proteins ACPL_4489 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACPL_4489 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPL_4492 SM00368 Leucine rich repeat, ribonuclease inhibitor type ACPL_4494 SM00248 ankyrin repeats ACPL_450 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ACPL_4500 SM00642 Alpha-amylase domain ACPL_4504 SM00429 ig-like, plexins, transcription factors ACPL_451 SM00926 Molybdopterin oxidoreductase Fe4S4 domain ACPL_451 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ACPL_4513 SM00861 Transketolase, pyrimidine binding domain ACPL_4518 SM00347 helix_turn_helix multiple antibiotic resistance protein ACPL_4519 SM00060 Fibronectin type 3 domain ACPL_4519 SM00637 ACPL_4519 ACPL_4531 SM00382 ATPases associated with a variety of cellular activities ACPL_4532 SM00382 ATPases associated with a variety of cellular activities ACPL_4535 SM00220 Serine/Threonine protein kinases, catalytic domain ACPL_4535 SM01260 ACPL_4535 ACPL_4536 SM00421 helix_turn_helix, Lux Regulon ACPL_4537 SM00421 helix_turn_helix, Lux Regulon ACPL_4551 SM00267 diguanylate cyclase ACPL_4556 SM00382 ATPases associated with a variety of cellular activities ACPL_4563 SM00387 Histidine kinase-like ATPases ACPL_4564 SM00421 helix_turn_helix, Lux Regulon ACPL_4564 SM00448 cheY-homologous receiver domain ACPL_4565 SM00347 helix_turn_helix multiple antibiotic resistance protein ACPL_4572 SM00829 Enoylreductase ACPL_4589 SM00530 Helix-turn-helix XRE-family like proteins ACPL_4594 SM00331 Sigma factor PP2C-like phosphatases ACPL_4594 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain ACPL_4594 SM00422 helix_turn_helix, mercury resistance ACPL_460 SM00346 helix_turn_helix isocitrate lyase regulation ACPL_4601 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ACPL_4603 SM01130 ACPL_4603 ACPL_4604 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACPL_4605 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPL_4605 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ACPL_4605 SM00091 PAS domain ACPL_4605 SM00387 Histidine kinase-like ATPases ACPL_4605 SM00388 His Kinase A (phosphoacceptor) domain ACPL_4607 SM00710 Parallel beta-helix repeats ACPL_4610 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs ACPL_4610 SM00475 5'-3' exonuclease ACPL_4613 SM00530 Helix-turn-helix XRE-family like proteins ACPL_4615 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPL_4615 SM00387 Histidine kinase-like ATPases ACPL_4615 SM00388 His Kinase A (phosphoacceptor) domain ACPL_4616 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPL_4616 SM00091 PAS domain ACPL_4616 SM00387 Histidine kinase-like ATPases ACPL_4616 SM00388 His Kinase A (phosphoacceptor) domain ACPL_4620 SM00422 helix_turn_helix, mercury resistance ACPL_4625 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ACPL_4625 SM00419 helix_turn_helix, cAMP Regulatory protein ACPL_4627 SM00267 diguanylate cyclase ACPL_4644 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ACPL_4646 SM00226 Low molecular weight phosphatase family ACPL_4647 SM00458 Ricin-type beta-trefoil ACPL_4649 SM00091 PAS domain ACPL_4649 SM00331 Sigma factor PP2C-like phosphatases ACPL_4649 SM00387 Histidine kinase-like ATPases ACPL_4649 SM00388 His Kinase A (phosphoacceptor) domain ACPL_4649 SM00448 cheY-homologous receiver domain ACPL_4656 SM00567 E-Z type HEAT repeats ACPL_4657 SM00858 ACPL_4657 ACPL_4661 SM00354 helix_turn _helix lactose operon repressor ACPL_4662 SM00420 helix_turn_helix, Deoxyribose operon repressor ACPL_4662 SM01134 ACPL_4662 ACPL_4664 SM00448 cheY-homologous receiver domain ACPL_4666 SM00357 Cold shock protein domain ACPL_4685 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPL_4686 SM00052 Putative diguanylate phosphodiesterase ACPL_4686 SM00267 diguanylate cyclase ACPL_4688 SM00642 Alpha-amylase domain ACPL_4690 SM00342 helix_turn_helix, arabinose operon control protein ACPL_4692 SM00822 ACPL_4692 ACPL_4695 SM01236 ACPL_4695 ACPL_4696 SM00704 CDGSH-type zinc finger. Function unknown. ACPL_4702 SM00232 JAB/MPN domain ACPL_4703 SM00387 Histidine kinase-like ATPases ACPL_4703 SM00388 His Kinase A (phosphoacceptor) domain ACPL_4704 SM00448 cheY-homologous receiver domain ACPL_4704 SM00862 Transcriptional regulatory protein, C terminal ACPL_4725 SM00052 Putative diguanylate phosphodiesterase ACPL_4725 SM00267 diguanylate cyclase ACPL_4727 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPL_4727 SM00387 Histidine kinase-like ATPases ACPL_4727 SM00388 His Kinase A (phosphoacceptor) domain ACPL_4742 SM00637 ACPL_4742 ACPL_4751 SM00382 ATPases associated with a variety of cellular activities ACPL_4751 SM00930 ACPL_4751 ACPL_4766 SM00829 Enoylreductase ACPL_4767 SM00530 Helix-turn-helix XRE-family like proteins ACPL_4775 SM00530 Helix-turn-helix XRE-family like proteins ACPL_4777 SM00028 Tetratricopeptide repeats ACPL_4777 SM00862 Transcriptional regulatory protein, C terminal ACPL_4777 SM01043 Bacterial transcriptional activator domain ACPL_4778 SM00560 LamG-like jellyroll fold domain ACPL_4779 SM00458 Ricin-type beta-trefoil ACPL_4785 SM00954 Region found in RelA / SpoT proteins ACPL_4800 SM00387 Histidine kinase-like ATPases ACPL_4800 SM00388 His Kinase A (phosphoacceptor) domain ACPL_4800 SM00448 cheY-homologous receiver domain ACPL_4801 SM00387 Histidine kinase-like ATPases ACPL_4801 SM00388 His Kinase A (phosphoacceptor) domain ACPL_4802 SM00060 Fibronectin type 3 domain ACPL_4806 SM00448 cheY-homologous receiver domain ACPL_4806 SM00862 Transcriptional regulatory protein, C terminal ACPL_4809 SM00387 Histidine kinase-like ATPases ACPL_4809 SM00388 His Kinase A (phosphoacceptor) domain ACPL_4809 SM00448 cheY-homologous receiver domain ACPL_4813 SM00052 Putative diguanylate phosphodiesterase ACPL_4816 SM00267 diguanylate cyclase ACPL_4817 SM00306 Hint (Hedgehog/Intein) domain N-terminal region ACPL_4821 SM00052 Putative diguanylate phosphodiesterase ACPL_4821 SM00267 diguanylate cyclase ACPL_4834 SM01001 AIR carboxylase ACPL_484 SM00487 DEAD-like helicases superfamily ACPL_484 SM00490 helicase superfamily c-terminal domain ACPL_4841 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPL_4841 SM00091 PAS domain ACPL_4841 SM00331 Sigma factor PP2C-like phosphatases ACPL_4842 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACPL_4842 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPL_4847 SM00028 Tetratricopeptide repeats ACPL_4847 SM00421 helix_turn_helix, Lux Regulon ACPL_4850 SM00637 ACPL_4850 ACPL_4851 SM00637 ACPL_4851 ACPL_4852 SM00091 PAS domain ACPL_4852 SM00387 Histidine kinase-like ATPases ACPL_4852 SM00388 His Kinase A (phosphoacceptor) domain ACPL_4861 SM00347 helix_turn_helix multiple antibiotic resistance protein ACPL_4862 SM00060 Fibronectin type 3 domain ACPL_4866 SM00861 Transketolase, pyrimidine binding domain ACPL_4868 SM00344 helix_turn_helix ASNC type ACPL_4879 SM00052 Putative diguanylate phosphodiesterase ACPL_4879 SM00267 diguanylate cyclase ACPL_4881 SM00530 Helix-turn-helix XRE-family like proteins ACPL_4894 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACPL_4894 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPL_4895 SM00028 Tetratricopeptide repeats ACPL_490 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain ACPL_490 SM00437 Bacterial DNA topoisomerase I DNA-binding domain ACPL_490 SM00493 ACPL_490 ACPL_4902 SM00267 diguanylate cyclase ACPL_4903 SM00994 ClpX C4-type zinc finger ACPL_4904 SM00458 Ricin-type beta-trefoil ACPL_4919 SM00422 helix_turn_helix, mercury resistance ACPL_4919 SM00871 Bacterial transcription activator, effector binding domain ACPL_4925 SM00637 ACPL_4925 ACPL_4926 SM00631 ACPL_4926 ACPL_4927 SM00354 helix_turn _helix lactose operon repressor ACPL_4941 SM00458 Ricin-type beta-trefoil ACPL_4941 SM00633 Glycosyl hydrolase family 10 ACPL_4948 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACPL_4948 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPL_495 SM00633 Glycosyl hydrolase family 10 ACPL_4954 SM00822 ACPL_4954 ACPL_496 SM00382 ATPases associated with a variety of cellular activities ACPL_4964 SM00231 Coagulation factor 5/8 C-terminal domain, discoidin domain ACPL_4967 SM00354 helix_turn _helix lactose operon repressor ACPL_4975 SM01092 CO dehydrogenase flavoprotein C-terminal domain ACPL_4986 SM00903 Flavin reductase like domain ACPL_4987 SM00421 helix_turn_helix, Lux Regulon ACPL_4988 SM00710 Parallel beta-helix repeats ACPL_4997 SM00342 helix_turn_helix, arabinose operon control protein ACPL_5004 SM00773 Proposed nucleic acid binding domain ACPL_5020 SM00656 ACPL_5020 ACPL_5023 SM00220 Serine/Threonine protein kinases, catalytic domain ACPL_5028 SM00825 Beta-ketoacyl synthase ACPL_5038 SM00382 ATPases associated with a variety of cellular activities ACPL_5040 SM00382 ATPases associated with a variety of cellular activities ACPL_5044 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPL_5044 SM00091 PAS domain ACPL_5044 SM00267 diguanylate cyclase ACPL_5061 SM00562 ACPL_5061 ACPL_5063 SM00448 cheY-homologous receiver domain ACPL_5063 SM00862 Transcriptional regulatory protein, C terminal ACPL_5064 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPL_5064 SM00387 Histidine kinase-like ATPases ACPL_5064 SM00388 His Kinase A (phosphoacceptor) domain ACPL_5069 SM00382 ATPases associated with a variety of cellular activities ACPL_5070 SM00422 helix_turn_helix, mercury resistance ACPL_5072 SM00422 helix_turn_helix, mercury resistance ACPL_5073 SM00240 Forkhead associated domain ACPL_508 SM00306 Hint (Hedgehog/Intein) domain N-terminal region ACPL_5081 SM00342 helix_turn_helix, arabinose operon control protein ACPL_5083 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ACPL_5084 SM00327 von Willebrand factor (vWF) type A domain ACPL_5087 SM00267 diguanylate cyclase ACPL_5088 SM00382 ATPases associated with a variety of cellular activities ACPL_5091 SM01065 Starch binding domain ACPL_5094 SM00052 Putative diguanylate phosphodiesterase ACPL_5094 SM00267 diguanylate cyclase ACPL_5096 SM00052 Putative diguanylate phosphodiesterase ACPL_5096 SM00267 diguanylate cyclase ACPL_5098 SM00636 ACPL_5098 ACPL_5101 SM00342 helix_turn_helix, arabinose operon control protein ACPL_5118 SM00382 ATPases associated with a variety of cellular activities ACPL_5121 SM00354 helix_turn _helix lactose operon repressor ACPL_5127 SM00028 Tetratricopeptide repeats ACPL_5128 SM00267 diguanylate cyclase ACPL_5131 SM00382 ATPases associated with a variety of cellular activities ACPL_5136 SM00260 Two component signalling adaptor domain ACPL_5137 SM00138 Methyltransferase, chemotaxis proteins ACPL_5138 SM00260 Two component signalling adaptor domain ACPL_5139 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACPL_5140 SM00073 Histidine Phosphotransfer domain ACPL_5140 SM00260 Two component signalling adaptor domain ACPL_5140 SM00387 Histidine kinase-like ATPases ACPL_5140 SM00448 cheY-homologous receiver domain ACPL_5141 SM00448 cheY-homologous receiver domain ACPL_5142 SM00387 Histidine kinase-like ATPases ACPL_5142 SM00388 His Kinase A (phosphoacceptor) domain ACPL_5142 SM00448 cheY-homologous receiver domain ACPL_5144 SM00382 ATPases associated with a variety of cellular activities ACPL_5146 SM00421 helix_turn_helix, Lux Regulon ACPL_5146 SM00448 cheY-homologous receiver domain ACPL_515 SM00530 Helix-turn-helix XRE-family like proteins ACPL_5152 SM00495 Chitin-binding domain type 3 ACPL_5156 SM00530 Helix-turn-helix XRE-family like proteins ACPL_5165 SM00014 Acid phosphatase homologues ACPL_5166 SM00014 Acid phosphatase homologues ACPL_5168 SM00347 helix_turn_helix multiple antibiotic resistance protein ACPL_5171 SM00382 ATPases associated with a variety of cellular activities ACPL_5177 SM00637 ACPL_5177 ACPL_5178 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ACPL_518 SM00530 Helix-turn-helix XRE-family like proteins ACPL_5185 SM00849 Metallo-beta-lactamase superfamily ACPL_5189 SM00382 ATPases associated with a variety of cellular activities ACPL_5192 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPL_5192 SM00387 Histidine kinase-like ATPases ACPL_5192 SM00388 His Kinase A (phosphoacceptor) domain ACPL_5193 SM00448 cheY-homologous receiver domain ACPL_5193 SM00862 Transcriptional regulatory protein, C terminal ACPL_5194 SM00900 ACPL_5194 ACPL_5197 SM00849 Metallo-beta-lactamase superfamily ACPL_5200 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ACPL_5203 SM00052 Putative diguanylate phosphodiesterase ACPL_5206 SM00062 Bacterial periplasmic substrate-binding proteins ACPL_5209 SM00331 Sigma factor PP2C-like phosphatases ACPL_5209 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain ACPL_521 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen ACPL_5210 SM00327 von Willebrand factor (vWF) type A domain ACPL_5211 SM00240 Forkhead associated domain ACPL_5219 SM00642 Alpha-amylase domain ACPL_5222 SM00487 DEAD-like helicases superfamily ACPL_5222 SM00490 helicase superfamily c-terminal domain ACPL_5222 SM01142 ACPL_5222 ACPL_5234 SM00560 LamG-like jellyroll fold domain ACPL_5238 SM00267 diguanylate cyclase ACPL_5247 SM00382 ATPases associated with a variety of cellular activities ACPL_5253 SM00421 helix_turn_helix, Lux Regulon ACPL_5253 SM00448 cheY-homologous receiver domain ACPL_5255 SM00382 ATPases associated with a variety of cellular activities ACPL_5258 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ACPL_526 SM00487 DEAD-like helicases superfamily ACPL_526 SM00490 helicase superfamily c-terminal domain ACPL_5261 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACPL_5261 SM00866 ACPL_5261 ACPL_5264 SM00421 helix_turn_helix, Lux Regulon ACPL_5264 SM00448 cheY-homologous receiver domain ACPL_5269 SM00855 Phosphoglycerate mutase family ACPL_5273 SM00421 helix_turn_helix, Lux Regulon ACPL_5273 SM00448 cheY-homologous receiver domain ACPL_5280 SM00382 ATPases associated with a variety of cellular activities ACPL_5280 SM00421 helix_turn_helix, Lux Regulon ACPL_5281 SM00382 ATPases associated with a variety of cellular activities ACPL_5281 SM00421 helix_turn_helix, Lux Regulon ACPL_5282 SM00382 ATPases associated with a variety of cellular activities ACPL_5282 SM01086 C-terminal, D2-small domain, of ClpB protein ACPL_529 SM00357 Cold shock protein domain ACPL_5293 SM00862 Transcriptional regulatory protein, C terminal ACPL_5294 SM00957 SecA DEAD-like domain ACPL_5294 SM00958 SecA preprotein cross-linking domain ACPL_5304 SM00327 von Willebrand factor (vWF) type A domain ACPL_5304 SM00382 ATPases associated with a variety of cellular activities ACPL_5307 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ACPL_5310 SM00052 Putative diguanylate phosphodiesterase ACPL_5310 SM00267 diguanylate cyclase ACPL_5313 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPL_5313 SM00331 Sigma factor PP2C-like phosphatases ACPL_5318 SM00382 ATPases associated with a variety of cellular activities ACPL_5318 SM00487 DEAD-like helicases superfamily ACPL_5318 SM00490 helicase superfamily c-terminal domain ACPL_5318 SM00847 Helicase associated domain (HA2) Add an annotation ACPL_5320 SM00448 cheY-homologous receiver domain ACPL_5321 SM00387 Histidine kinase-like ATPases ACPL_5321 SM00388 His Kinase A (phosphoacceptor) domain ACPL_5322 SM00047 Lysozyme subfamily 2 ACPL_5322 SM00287 Bacterial SH3 domain homologues ACPL_5323 SM00014 Acid phosphatase homologues ACPL_5329 SM00642 Alpha-amylase domain ACPL_5330 SM00642 Alpha-amylase domain ACPL_5332 SM00642 Alpha-amylase domain ACPL_5335 SM00331 Sigma factor PP2C-like phosphatases ACPL_5335 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain ACPL_5336 SM00316 Ribosomal protein S1-like RNA-binding domain ACPL_5336 SM00732 Likely ribonuclease with RNase H fold. ACPL_5337 SM00220 Serine/Threonine protein kinases, catalytic domain ACPL_5341 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ACPL_5345 SM00637 ACPL_5345 ACPL_5348 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPL_5348 SM00267 diguanylate cyclase ACPL_5353 SM00421 helix_turn_helix, Lux Regulon ACPL_5353 SM00448 cheY-homologous receiver domain ACPL_5354 SM00387 Histidine kinase-like ATPases ACPL_5361 SM00052 Putative diguanylate phosphodiesterase ACPL_5361 SM00267 diguanylate cyclase ACPL_5362 SM00091 PAS domain ACPL_5362 SM00267 diguanylate cyclase ACPL_5366 SM00354 helix_turn _helix lactose operon repressor ACPL_5367 SM00342 helix_turn_helix, arabinose operon control protein ACPL_5368 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ACPL_5369 SM00354 helix_turn _helix lactose operon repressor ACPL_5377 SM00656 ACPL_5377 ACPL_5383 SM00354 helix_turn _helix lactose operon repressor ACPL_5388 SM00344 helix_turn_helix ASNC type ACPL_5389 SM01002 Alanine dehydrogenase/PNT, C-terminal domain ACPL_5389 SM01003 Alanine dehydrogenase/PNT, N-terminal domain ACPL_5392 SM00421 helix_turn_helix, Lux Regulon ACPL_5392 SM00448 cheY-homologous receiver domain ACPL_540 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ACPL_5411 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACPL_5411 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPL_5428 SM00354 helix_turn _helix lactose operon repressor ACPL_543 SM00347 helix_turn_helix multiple antibiotic resistance protein ACPL_5439 SM00282 Laminin G domain ACPL_5444 SM00382 ATPases associated with a variety of cellular activities ACPL_5446 SM00354 helix_turn _helix lactose operon repressor ACPL_5448 SM01007 Class II Aldolase and Adducin N-terminal domain ACPL_5449 SM00849 Metallo-beta-lactamase superfamily ACPL_5452 SM00829 Enoylreductase ACPL_5457 SM00387 Histidine kinase-like ATPases ACPL_5459 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACPL_5462 SM00382 ATPases associated with a variety of cellular activities ACPL_5466 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPL_5466 SM01012 ACPL_5466 ACPL_5468 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPL_5468 SM01012 ACPL_5468 ACPL_5471 SM00915 Jacalin-like lectin domain ACPL_5488 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACPL_5489 SM01120 ACPL_5489 ACPL_5494 SM00633 Glycosyl hydrolase family 10 ACPL_5498 SM00822 ACPL_5498 ACPL_5502 SM00829 Enoylreductase ACPL_5511 SM00894 Excalibur calcium-binding domain ACPL_5514 SM00530 Helix-turn-helix XRE-family like proteins ACPL_5516 SM00388 His Kinase A (phosphoacceptor) domain ACPL_5518 SM00813 Alpha-L-arabinofuranosidase C-terminus ACPL_5520 SM00091 PAS domain ACPL_5521 SM00052 Putative diguanylate phosphodiesterase ACPL_5521 SM00267 diguanylate cyclase ACPL_5532 SM00052 Putative diguanylate phosphodiesterase ACPL_5532 SM00267 diguanylate cyclase ACPL_5559 SM00318 Staphylococcal nuclease homologues ACPL_5560 SM00382 ATPases associated with a variety of cellular activities ACPL_5561 SM00382 ATPases associated with a variety of cellular activities ACPL_5567 SM00506 Appr-1"-p processing enzyme ACPL_5574 SM00382 ATPases associated with a variety of cellular activities ACPL_5576 SM00862 Transcriptional regulatory protein, C terminal ACPL_5576 SM01043 Bacterial transcriptional activator domain ACPL_5578 SM00267 diguanylate cyclase ACPL_558 SM00382 ATPases associated with a variety of cellular activities ACPL_5586 SM00354 helix_turn _helix lactose operon repressor ACPL_5596 SM00822 ACPL_5596 ACPL_5601 SM00052 Putative diguanylate phosphodiesterase ACPL_5609 SM00382 ATPases associated with a variety of cellular activities ACPL_5621 SM00632 ACPL_5621 ACPL_5621 SM00642 Alpha-amylase domain ACPL_5621 SM01065 Starch binding domain ACPL_5628 SM00346 helix_turn_helix isocitrate lyase regulation ACPL_564 SM00382 ATPases associated with a variety of cellular activities ACPL_5645 SM00267 diguanylate cyclase ACPL_5657 SM00984 UDP binding domain ACPL_5661 SM00421 helix_turn_helix, Lux Regulon ACPL_5664 SM00838 Elongation factor G C-terminus ACPL_5664 SM00889 Elongation factor G, domain IV ACPL_5667 SM00421 helix_turn_helix, Lux Regulon ACPL_5667 SM00448 cheY-homologous receiver domain ACPL_5673 SM00354 helix_turn _helix lactose operon repressor ACPL_5679 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACPL_5679 SM00895 ACPL_5679 ACPL_5680 SM00052 Putative diguanylate phosphodiesterase ACPL_5680 SM00267 diguanylate cyclase ACPL_5681 SM00382 ATPases associated with a variety of cellular activities ACPL_5683 SM00862 Transcriptional regulatory protein, C terminal ACPL_5683 SM01043 Bacterial transcriptional activator domain ACPL_5692 SM00382 ATPases associated with a variety of cellular activities ACPL_5696 SM00448 cheY-homologous receiver domain ACPL_5696 SM00862 Transcriptional regulatory protein, C terminal ACPL_5697 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPL_5697 SM00387 Histidine kinase-like ATPases ACPL_5700 SM00421 helix_turn_helix, Lux Regulon ACPL_5700 SM00448 cheY-homologous receiver domain ACPL_5701 SM00387 Histidine kinase-like ATPases ACPL_5703 SM00382 ATPases associated with a variety of cellular activities ACPL_5710 SM00220 Serine/Threonine protein kinases, catalytic domain ACPL_5711 SM00267 diguanylate cyclase ACPL_5718 SM01029 Beta-galactosidase, domain 2 ACPL_573 SM00450 Rhodanese Homology Domain ACPL_5749 SM00710 Parallel beta-helix repeats ACPL_5755 SM00926 Molybdopterin oxidoreductase Fe4S4 domain ACPL_5762 SM00487 DEAD-like helicases superfamily ACPL_5762 SM00490 helicase superfamily c-terminal domain ACPL_5763 SM00382 ATPases associated with a variety of cellular activities ACPL_5769 SM00857 Resolvase, N terminal domain ACPL_5782 SM00530 Helix-turn-helix XRE-family like proteins ACPL_5784 SM00465 GIY-YIG type nucleases (URI domain) ACPL_580 SM00448 cheY-homologous receiver domain ACPL_581 SM00829 Enoylreductase ACPL_5822 SM00421 helix_turn_helix, Lux Regulon ACPL_5825 SM00530 Helix-turn-helix XRE-family like proteins ACPL_5827 SM00465 GIY-YIG type nucleases (URI domain) ACPL_583 SM00421 helix_turn_helix, Lux Regulon ACPL_583 SM00448 cheY-homologous receiver domain ACPL_5832 SM00382 ATPases associated with a variety of cellular activities ACPL_5834 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPL_5836 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACPL_5836 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPL_5840 SM00028 Tetratricopeptide repeats ACPL_5845 SM00641 Glycosyl hydrolases family 25 ACPL_5862 SM00860 SMI1 / KNR4 family ACPL_587 SM00052 Putative diguanylate phosphodiesterase ACPL_587 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPL_587 SM00267 diguanylate cyclase ACPL_5875 SM00507 HNH nucleases ACPL_5895 SM00858 ACPL_5895 ACPL_5906 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPL_5908 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACPL_5908 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPL_5923 SM00530 Helix-turn-helix XRE-family like proteins ACPL_5928 SM00487 DEAD-like helicases superfamily ACPL_5928 SM00490 helicase superfamily c-terminal domain ACPL_597 SM00028 Tetratricopeptide repeats ACPL_5972 SM00382 ATPases associated with a variety of cellular activities ACPL_598 SM00028 Tetratricopeptide repeats ACPL_600 SM00347 helix_turn_helix multiple antibiotic resistance protein ACPL_6012 SM00944 Pro-kumamolisin, activation domain ACPL_6014 SM00752 Horizontally Transferred TransMembrane Domain ACPL_6018 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPL_6018 SM00387 Histidine kinase-like ATPases ACPL_6018 SM00388 His Kinase A (phosphoacceptor) domain ACPL_6019 SM00448 cheY-homologous receiver domain ACPL_6019 SM00862 Transcriptional regulatory protein, C terminal ACPL_6027 SM00421 helix_turn_helix, Lux Regulon ACPL_603 SM00636 ACPL_603 ACPL_6037 SM00458 Ricin-type beta-trefoil ACPL_6038 SM00458 Ricin-type beta-trefoil ACPL_6039 SM00354 helix_turn _helix lactose operon repressor ACPL_6044 SM00729 Elongator protein 3, MiaB family, Radical SAM ACPL_6048 SM00421 helix_turn_helix, Lux Regulon ACPL_605 SM00822 ACPL_605 ACPL_6051 SM00822 ACPL_6051 ACPL_6051 SM00823 Phosphopantetheine attachment site ACPL_6051 SM00825 Beta-ketoacyl synthase ACPL_6051 SM00826 ACPL_6051 ACPL_6051 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. ACPL_6051 SM01294 ACPL_6051 ACPL_6052 SM00822 ACPL_6052 ACPL_6052 SM00823 Phosphopantetheine attachment site ACPL_6052 SM00824 Thioesterase ACPL_6052 SM00825 Beta-ketoacyl synthase ACPL_6052 SM00826 ACPL_6052 ACPL_6052 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. ACPL_6052 SM01294 ACPL_6052 ACPL_6053 SM00822 ACPL_6053 ACPL_6053 SM00823 Phosphopantetheine attachment site ACPL_6053 SM00825 Beta-ketoacyl synthase ACPL_6053 SM00826 ACPL_6053 ACPL_6053 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. ACPL_6053 SM01294 ACPL_6053 ACPL_6054 SM00822 ACPL_6054 ACPL_6054 SM00823 Phosphopantetheine attachment site ACPL_6054 SM00825 Beta-ketoacyl synthase ACPL_6054 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. ACPL_6054 SM01294 ACPL_6054 ACPL_6055 SM00822 ACPL_6055 ACPL_6055 SM00823 Phosphopantetheine attachment site ACPL_6055 SM00825 Beta-ketoacyl synthase ACPL_6055 SM00826 ACPL_6055 ACPL_6055 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. ACPL_6055 SM01294 ACPL_6055 ACPL_6058 SM00421 helix_turn_helix, Lux Regulon ACPL_6062 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ACPL_6072 SM00862 Transcriptional regulatory protein, C terminal ACPL_6072 SM01043 Bacterial transcriptional activator domain ACPL_6076 SM00903 Flavin reductase like domain ACPL_6078 SM00822 ACPL_6078 ACPL_6078 SM00823 Phosphopantetheine attachment site ACPL_6078 SM00825 Beta-ketoacyl synthase ACPL_6078 SM00826 ACPL_6078 ACPL_6078 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. ACPL_6078 SM01294 ACPL_6078 ACPL_6086 SM00824 Thioesterase ACPL_6089 SM00822 ACPL_6089 ACPL_6090 SM00267 diguanylate cyclase ACPL_6101 SM00347 helix_turn_helix multiple antibiotic resistance protein ACPL_6108 SM00796 Allophanate hydrolase subunit 1 ACPL_6108 SM00797 Allophanate hydrolase subunit 2 ACPL_6108 SM00878 Biotin carboxylase C-terminal domain ACPL_6129 SM00320 WD40 repeats ACPL_613 SM00382 ATPases associated with a variety of cellular activities ACPL_6130 SM00637 ACPL_6130 ACPL_6133 SM00267 diguanylate cyclase ACPL_6136 SM00448 cheY-homologous receiver domain ACPL_6136 SM00862 Transcriptional regulatory protein, C terminal ACPL_6138 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPL_6138 SM00387 Histidine kinase-like ATPases ACPL_6145 SM00903 Flavin reductase like domain ACPL_6147 SM00825 Beta-ketoacyl synthase ACPL_6148 SM00822 ACPL_6148 ACPL_6148 SM00823 Phosphopantetheine attachment site ACPL_6148 SM00825 Beta-ketoacyl synthase ACPL_6148 SM00826 ACPL_6148 ACPL_6148 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. ACPL_6148 SM01294 ACPL_6148 ACPL_6149 SM00822 ACPL_6149 ACPL_6149 SM00823 Phosphopantetheine attachment site ACPL_6149 SM00825 Beta-ketoacyl synthase ACPL_6149 SM00826 ACPL_6149 ACPL_6149 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. ACPL_6149 SM00829 Enoylreductase ACPL_6149 SM01294 ACPL_6149 ACPL_615 SM00052 Putative diguanylate phosphodiesterase ACPL_615 SM00267 diguanylate cyclase ACPL_6153 SM00729 Elongator protein 3, MiaB family, Radical SAM ACPL_6154 SM00382 ATPases associated with a variety of cellular activities ACPL_6154 SM00862 Transcriptional regulatory protein, C terminal ACPL_6154 SM01043 Bacterial transcriptional activator domain ACPL_6157 SM00824 Thioesterase ACPL_6158 SM00823 Phosphopantetheine attachment site ACPL_6159 SM00382 ATPases associated with a variety of cellular activities ACPL_616 SM00062 Bacterial periplasmic substrate-binding proteins ACPL_6160 SM00382 ATPases associated with a variety of cellular activities ACPL_6171 SM00331 Sigma factor PP2C-like phosphatases ACPL_6174 SM00458 Ricin-type beta-trefoil ACPL_6175 SM00458 Ricin-type beta-trefoil ACPL_618 SM00382 ATPases associated with a variety of cellular activities ACPL_6181 SM00267 diguanylate cyclase ACPL_6183 SM00267 diguanylate cyclase ACPL_6186 SM00421 helix_turn_helix, Lux Regulon ACPL_6193 SM00823 Phosphopantetheine attachment site ACPL_6194 SM00823 Phosphopantetheine attachment site ACPL_6194 SM00825 Beta-ketoacyl synthase ACPL_6202 SM00862 Transcriptional regulatory protein, C terminal ACPL_6203 SM00052 Putative diguanylate phosphodiesterase ACPL_6203 SM00267 diguanylate cyclase ACPL_6205 SM00267 diguanylate cyclase ACPL_6206 SM00387 Histidine kinase-like ATPases ACPL_6207 SM00421 helix_turn_helix, Lux Regulon ACPL_6207 SM00448 cheY-homologous receiver domain ACPL_6213 SM00710 Parallel beta-helix repeats ACPL_6215 SM00710 Parallel beta-helix repeats ACPL_6216 SM00710 Parallel beta-helix repeats ACPL_623 SM00996 S-adenosyl-L-homocysteine hydrolase ACPL_623 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ACPL_6237 SM01209 ACPL_6237 ACPL_625 SM00354 helix_turn _helix lactose operon repressor ACPL_628 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACPL_628 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPL_630 SM00710 Parallel beta-helix repeats ACPL_6311 SM00382 ATPases associated with a variety of cellular activities ACPL_6314 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ACPL_6321 SM00363 S4 RNA-binding domain ACPL_6326 SM00342 helix_turn_helix, arabinose operon control protein ACPL_6328 SM00347 helix_turn_helix multiple antibiotic resistance protein ACPL_6335 SM01002 Alanine dehydrogenase/PNT, C-terminal domain ACPL_6335 SM01003 Alanine dehydrogenase/PNT, N-terminal domain ACPL_6337 SM00637 ACPL_6337 ACPL_6355 SM00363 S4 RNA-binding domain ACPL_6359 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACPL_637 SM00382 ATPases associated with a variety of cellular activities ACPL_6374 SM00420 helix_turn_helix, Deoxyribose operon repressor ACPL_6374 SM01134 ACPL_6374 ACPL_6384 SM00530 Helix-turn-helix XRE-family like proteins ACPL_6389 SM00849 Metallo-beta-lactamase superfamily ACPL_6398 SM00052 Putative diguanylate phosphodiesterase ACPL_6399 SM00642 Alpha-amylase domain ACPL_6403 SM00354 helix_turn _helix lactose operon repressor ACPL_6412 SM00859 Semialdehyde dehydrogenase, NAD binding domain ACPL_6428 SM01217 ACPL_6428 ACPL_643 SM00495 Chitin-binding domain type 3 ACPL_6430 SM00306 Hint (Hedgehog/Intein) domain N-terminal region ACPL_6441 SM00873 B3/4 domain ACPL_6441 SM00874 tRNA synthetase B5 domain ACPL_6441 SM00896 Ferredoxin-fold anticodon binding domain ACPL_6443 SM00967 RNA 2'-O ribose methyltransferase substrate binding ACPL_6450 SM00062 Bacterial periplasmic substrate-binding proteins ACPL_6450 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. ACPL_6452 SM00382 ATPases associated with a variety of cellular activities ACPL_6459 SM00563 Phosphate acyltransferases ACPL_6460 SM00267 diguanylate cyclase ACPL_6460 SM00448 cheY-homologous receiver domain ACPL_6468 SM01409 ACPL_6468 ACPL_6469 SM00072 Guanylate kinase homologues. ACPL_6471 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family ACPL_6474 SM00851 MGS-like domain ACPL_6474 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ACPL_6475 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain ACPL_6479 SM00530 Helix-turn-helix XRE-family like proteins ACPL_6481 SM00841 Elongation factor P, C-terminal ACPL_6481 SM01185 ACPL_6481 ACPL_6489 SM00732 Likely ribonuclease with RNase H fold. ACPL_6490 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain ACPL_6495 SM00382 ATPases associated with a variety of cellular activities ACPL_6498 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ACPL_6506 SM01119 ACPL_6506 ACPL_6512 SM00220 Serine/Threonine protein kinases, catalytic domain ACPL_6516 SM00829 Enoylreductase ACPL_6519 SM00637 ACPL_6519 ACPL_652 SM00327 von Willebrand factor (vWF) type A domain ACPL_6525 SM00849 Metallo-beta-lactamase superfamily ACPL_6528 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ACPL_6528 SM00954 Region found in RelA / SpoT proteins ACPL_653 SM01133 ACPL_653 ACPL_6532 SM01323 ACPL_6532 ACPL_6533 SM00382 ATPases associated with a variety of cellular activities ACPL_6534 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ACPL_654 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACPL_654 SM00866 ACPL_654 ACPL_6548 SM00838 Elongation factor G C-terminus ACPL_6548 SM00889 Elongation factor G, domain IV ACPL_6552 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain ACPL_6554 SM00448 cheY-homologous receiver domain ACPL_6554 SM00862 Transcriptional regulatory protein, C terminal ACPL_6555 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPL_6555 SM00387 Histidine kinase-like ATPases ACPL_6556 SM00060 Fibronectin type 3 domain ACPL_6562 SM00357 Cold shock protein domain ACPL_6571 SM00487 DEAD-like helicases superfamily ACPL_6571 SM00490 helicase superfamily c-terminal domain ACPL_6573 SM00849 Metallo-beta-lactamase superfamily ACPL_6576 SM00342 helix_turn_helix, arabinose operon control protein ACPL_6578 SM00421 helix_turn_helix, Lux Regulon ACPL_6578 SM00448 cheY-homologous receiver domain ACPL_6579 SM00387 Histidine kinase-like ATPases ACPL_6581 SM00382 ATPases associated with a variety of cellular activities ACPL_6592 SM00637 ACPL_6592 ACPL_6593 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPL_6593 SM00331 Sigma factor PP2C-like phosphatases ACPL_6595 SM00347 helix_turn_helix multiple antibiotic resistance protein ACPL_660 SM00267 diguanylate cyclase ACPL_6607 SM00155 Phospholipase D. Active site motifs. ACPL_6608 SM00421 helix_turn_helix, Lux Regulon ACPL_6608 SM00448 cheY-homologous receiver domain ACPL_6614 SM00487 DEAD-like helicases superfamily ACPL_6614 SM00490 helicase superfamily c-terminal domain ACPL_6614 SM00847 Helicase associated domain (HA2) Add an annotation ACPL_6616 SM00052 Putative diguanylate phosphodiesterase ACPL_6616 SM00267 diguanylate cyclase ACPL_6617 SM00331 Sigma factor PP2C-like phosphatases ACPL_6617 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain ACPL_6619 SM00062 Bacterial periplasmic substrate-binding proteins ACPL_662 SM00267 diguanylate cyclase ACPL_6620 SM01234 ACPL_6620 ACPL_6621 SM00642 Alpha-amylase domain ACPL_6622 SM00642 Alpha-amylase domain ACPL_6623 SM00642 Alpha-amylase domain ACPL_6637 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPL_6637 SM00387 Histidine kinase-like ATPases ACPL_6637 SM00388 His Kinase A (phosphoacceptor) domain ACPL_6654 SM00331 Sigma factor PP2C-like phosphatases ACPL_6655 SM00347 helix_turn_helix multiple antibiotic resistance protein ACPL_6666 SM00487 DEAD-like helicases superfamily ACPL_6666 SM00490 helicase superfamily c-terminal domain ACPL_6673 SM00354 helix_turn _helix lactose operon repressor ACPL_6675 SM00382 ATPases associated with a variety of cellular activities ACPL_6678 SM00382 ATPases associated with a variety of cellular activities ACPL_6684 SM00347 helix_turn_helix multiple antibiotic resistance protein ACPL_6685 SM00434 DNA Topoisomerase IV ACPL_6686 SM00387 Histidine kinase-like ATPases ACPL_6686 SM00433 TopoisomeraseII ACPL_6687 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain ACPL_6688 SM00421 helix_turn_helix, Lux Regulon ACPL_6690 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPL_6690 SM00387 Histidine kinase-like ATPases ACPL_6690 SM00388 His Kinase A (phosphoacceptor) domain ACPL_6691 SM00448 cheY-homologous receiver domain ACPL_6691 SM00862 Transcriptional regulatory protein, C terminal ACPL_6692 SM00479 ACPL_6692 ACPL_6693 SM00347 helix_turn_helix multiple antibiotic resistance protein ACPL_6699 SM00327 von Willebrand factor (vWF) type A domain ACPL_6714 SM00788 Adenylosuccinate synthetase ACPL_6717 SM00382 ATPases associated with a variety of cellular activities ACPL_6728 SM00354 helix_turn _helix lactose operon repressor ACPL_6729 SM00421 helix_turn_helix, Lux Regulon ACPL_6729 SM00448 cheY-homologous receiver domain ACPL_6730 SM00387 Histidine kinase-like ATPases ACPL_6732 SM00382 ATPases associated with a variety of cellular activities ACPL_6737 SM00220 Serine/Threonine protein kinases, catalytic domain ACPL_6738 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ACPL_6738 SM00091 PAS domain ACPL_6738 SM00387 Histidine kinase-like ATPases ACPL_6738 SM00388 His Kinase A (phosphoacceptor) domain ACPL_6738 SM00448 cheY-homologous receiver domain ACPL_6739 SM01400 ACPL_6739 ACPL_674 SM00347 helix_turn_helix multiple antibiotic resistance protein ACPL_6740 SM00382 ATPases associated with a variety of cellular activities ACPL_6742 SM00382 ATPases associated with a variety of cellular activities ACPL_6751 SM00306 Hint (Hedgehog/Intein) domain N-terminal region ACPL_6755 SM00347 helix_turn_helix multiple antibiotic resistance protein ACPL_6763 SM00637 ACPL_6763 ACPL_6766 SM00382 ATPases associated with a variety of cellular activities ACPL_677 SM00052 Putative diguanylate phosphodiesterase ACPL_678 SM00495 Chitin-binding domain type 3 ACPL_6780 SM00342 helix_turn_helix, arabinose operon control protein ACPL_6785 SM00267 diguanylate cyclase ACPL_6792 SM00014 Acid phosphatase homologues ACPL_6794 SM00046 Diacylglycerol kinase catalytic domain (presumed) ACPL_680 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins ACPL_6800 SM00862 Transcriptional regulatory protein, C terminal ACPL_6805 SM00421 helix_turn_helix, Lux Regulon ACPL_6805 SM00448 cheY-homologous receiver domain ACPL_6810 SM00342 helix_turn_helix, arabinose operon control protein ACPL_6813 SM00422 helix_turn_helix, mercury resistance ACPL_6818 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACPL_6820 SM00644 ACPL_6820 ACPL_6820 SM00701 Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. ACPL_6822 SM00642 Alpha-amylase domain ACPL_683 SM00257 Lysin motif ACPL_6834 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACPL_6836 SM00060 Fibronectin type 3 domain ACPL_6836 SM00231 Coagulation factor 5/8 C-terminal domain, discoidin domain ACPL_6836 SM00710 Parallel beta-helix repeats ACPL_6837 SM00231 Coagulation factor 5/8 C-terminal domain, discoidin domain ACPL_6837 SM00710 Parallel beta-helix repeats ACPL_6838 SM00642 Alpha-amylase domain ACPL_6842 SM00354 helix_turn _helix lactose operon repressor ACPL_6855 SM00100 Cyclic nucleotide-monophosphate binding domain ACPL_6855 SM00387 Histidine kinase-like ATPases ACPL_6856 SM00448 cheY-homologous receiver domain ACPL_6864 SM00382 ATPases associated with a variety of cellular activities ACPL_6865 SM00382 ATPases associated with a variety of cellular activities ACPL_6866 SM00237 Domains in Na-Ca exchangers and integrin-beta4 ACPL_6867 SM00098 Alkaline phosphatase homologues ACPL_6868 SM00421 helix_turn_helix, Lux Regulon ACPL_6868 SM00448 cheY-homologous receiver domain ACPL_6869 SM00387 Histidine kinase-like ATPases ACPL_6871 SM00382 ATPases associated with a variety of cellular activities ACPL_6873 SM00382 ATPases associated with a variety of cellular activities ACPL_6875 SM00347 helix_turn_helix multiple antibiotic resistance protein ACPL_6879 SM00421 helix_turn_helix, Lux Regulon ACPL_6885 SM00421 helix_turn_helix, Lux Regulon ACPL_6885 SM00448 cheY-homologous receiver domain ACPL_6886 SM00052 Putative diguanylate phosphodiesterase ACPL_6886 SM00091 PAS domain ACPL_6886 SM00267 diguanylate cyclase ACPL_6889 SM00606 Cellulose Binding Domain Type IV ACPL_6892 SM00357 Cold shock protein domain ACPL_6916 SM00320 WD40 repeats ACPL_693 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPL_693 SM00387 Histidine kinase-like ATPases ACPL_693 SM00388 His Kinase A (phosphoacceptor) domain ACPL_6933 SM00710 Parallel beta-helix repeats ACPL_6934 SM00710 Parallel beta-helix repeats ACPL_694 SM00448 cheY-homologous receiver domain ACPL_694 SM00862 Transcriptional regulatory protein, C terminal ACPL_6944 SM00235 Zinc-dependent metalloprotease ACPL_6950 SM00327 von Willebrand factor (vWF) type A domain ACPL_6951 SM00327 von Willebrand factor (vWF) type A domain ACPL_6956 SM00960 Roadblock/LC7 domain ACPL_6957 SM00387 Histidine kinase-like ATPases ACPL_6960 SM00382 ATPases associated with a variety of cellular activities ACPL_699 SM00331 Sigma factor PP2C-like phosphatases ACPL_699 SM00448 cheY-homologous receiver domain ACPL_6991 SM00900 ACPL_6991 ACPL_6996 SM00267 diguanylate cyclase ACPL_700 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPL_700 SM00387 Histidine kinase-like ATPases ACPL_700 SM00388 His Kinase A (phosphoacceptor) domain ACPL_7001 SM01006 Siderophore biosynthesis protein domain ACPL_7003 SM01006 Siderophore biosynthesis protein domain ACPL_7008 SM00342 helix_turn_helix, arabinose operon control protein ACPL_701 SM00448 cheY-homologous receiver domain ACPL_7012 SM00776 ACPL_7012 ACPL_7012 SM01029 Beta-galactosidase, domain 2 ACPL_7015 SM00637 ACPL_7015 ACPL_7016 SM00813 Alpha-L-arabinofuranosidase C-terminus ACPL_7018 SM00354 helix_turn _helix lactose operon repressor ACPL_7022 SM00091 PAS domain ACPL_7022 SM00267 diguanylate cyclase ACPL_7025 SM00421 helix_turn_helix, Lux Regulon ACPL_7025 SM00448 cheY-homologous receiver domain ACPL_7029 SM00823 Phosphopantetheine attachment site ACPL_7029 SM00825 Beta-ketoacyl synthase ACPL_7029 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. ACPL_703 SM00822 ACPL_703 ACPL_7037 SM00052 Putative diguanylate phosphodiesterase ACPL_7037 SM00091 PAS domain ACPL_7037 SM00267 diguanylate cyclase ACPL_7043 SM00729 Elongator protein 3, MiaB family, Radical SAM ACPL_7043 SM00876 Biotin and Thiamin Synthesis associated domain ACPL_705 SM00637 ACPL_705 ACPL_706 SM00822 ACPL_706 ACPL_7063 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ACPL_7070 SM00460 Transglutaminase/protease-like homologues ACPL_708 SM00487 DEAD-like helicases superfamily ACPL_708 SM00490 helicase superfamily c-terminal domain ACPL_7089 SM00341 Helicase and RNase D C-terminal ACPL_7089 SM00474 3'-5' exonuclease ACPL_7093 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPL_7093 SM00387 Histidine kinase-like ATPases ACPL_7093 SM00388 His Kinase A (phosphoacceptor) domain ACPL_7094 SM00448 cheY-homologous receiver domain ACPL_7094 SM00862 Transcriptional regulatory protein, C terminal ACPL_7098 SM00861 Transketolase, pyrimidine binding domain ACPL_7116 SM00267 diguanylate cyclase ACPL_7117 SM00487 DEAD-like helicases superfamily ACPL_7126 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACPL_7127 SM00448 cheY-homologous receiver domain ACPL_7129 SM00073 Histidine Phosphotransfer domain ACPL_7129 SM00260 Two component signalling adaptor domain ACPL_7129 SM00387 Histidine kinase-like ATPases ACPL_7129 SM01231 ACPL_7129 ACPL_7130 SM00448 cheY-homologous receiver domain ACPL_7131 SM00138 Methyltransferase, chemotaxis proteins ACPL_7133 SM00448 cheY-homologous receiver domain ACPL_7134 SM00260 Two component signalling adaptor domain ACPL_7135 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACPL_7140 SM00881 CoA binding domain ACPL_7142 SM00529 Helix-turn-helix diphteria tox regulatory element ACPL_7142 SM00899 ACPL_7142 ACPL_7154 SM00919 Malic enzyme, NAD binding domain ACPL_7154 SM01274 ACPL_7154 ACPL_7164 SM00729 Elongator protein 3, MiaB family, Radical SAM ACPL_7166 SM00382 ATPases associated with a variety of cellular activities ACPL_7167 SM00062 Bacterial periplasmic substrate-binding proteins ACPL_717 SM00487 DEAD-like helicases superfamily ACPL_717 SM00490 helicase superfamily c-terminal domain ACPL_7170 SM00322 K homology RNA-binding domain ACPL_7170 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ACPL_7172 SM00382 ATPases associated with a variety of cellular activities ACPL_7174 SM00986 Uracil DNA glycosylase superfamily ACPL_7174 SM00987 UreE urease accessory protein, C-terminal domain ACPL_7175 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACPL_7178 SM00220 Serine/Threonine protein kinases, catalytic domain ACPL_7179 SM00382 ATPases associated with a variety of cellular activities ACPL_7179 SM00487 DEAD-like helicases superfamily ACPL_7179 SM00490 helicase superfamily c-terminal domain ACPL_7182 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain ACPL_7182 SM01232 ACPL_7182 ACPL_7185 SM00530 Helix-turn-helix XRE-family like proteins ACPL_7188 SM00729 Elongator protein 3, MiaB family, Radical SAM ACPL_7191 SM00382 ATPases associated with a variety of cellular activities ACPL_7191 SM00843 ACPL_7191 ACPL_7194 SM00849 Metallo-beta-lactamase superfamily ACPL_7195 SM01130 ACPL_7195 ACPL_7200 SM00357 Cold shock protein domain ACPL_7201 SM00422 helix_turn_helix, mercury resistance ACPL_7204 SM00316 Ribosomal protein S1-like RNA-binding domain ACPL_7204 SM00322 K homology RNA-binding domain ACPL_7205 SM01387 ACPL_7205 ACPL_7206 SM00904 Riboflavin kinase ACPL_7207 SM00387 Histidine kinase-like ATPases ACPL_7207 SM00388 His Kinase A (phosphoacceptor) domain ACPL_7207 SM00448 cheY-homologous receiver domain ACPL_7208 SM00448 cheY-homologous receiver domain ACPL_7218 SM00322 K homology RNA-binding domain ACPL_7226 SM00331 Sigma factor PP2C-like phosphatases ACPL_7231 SM01230 ACPL_7231 ACPL_7235 SM00382 ATPases associated with a variety of cellular activities ACPL_7236 SM00421 helix_turn_helix, Lux Regulon ACPL_7236 SM00448 cheY-homologous receiver domain ACPL_7237 SM00387 Histidine kinase-like ATPases ACPL_7238 SM00422 helix_turn_helix, mercury resistance ACPL_7239 SM00530 Helix-turn-helix XRE-family like proteins ACPL_7242 SM00382 ATPases associated with a variety of cellular activities ACPL_7244 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ACPL_725 SM00450 Rhodanese Homology Domain ACPL_7256 SM00729 Elongator protein 3, MiaB family, Radical SAM ACPL_7263 SM00382 ATPases associated with a variety of cellular activities ACPL_7268 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACPL_728 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase ACPL_7288 SM00382 ATPases associated with a variety of cellular activities ACPL_7288 SM00962 SRP54-type protein, GTPase domain ACPL_7288 SM00963 SRP54-type protein, helical bundle domain ACPL_7291 SM00984 UDP binding domain ACPL_7302 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ACPL_7303 SM00938 Nitrogen regulatory protein P-II ACPL_7306 SM00382 ATPases associated with a variety of cellular activities ACPL_7306 SM00962 SRP54-type protein, GTPase domain ACPL_7306 SM00963 SRP54-type protein, helical bundle domain ACPL_7311 SM00968 SMC proteins Flexible Hinge Domain ACPL_7316 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain ACPL_7316 SM01232 ACPL_7316 ACPL_7318 SM00358 Double-stranded RNA binding motif ACPL_7318 SM00535 Ribonuclease III family ACPL_7327 SM00487 DEAD-like helicases superfamily ACPL_7327 SM00490 helicase superfamily c-terminal domain ACPL_7328 SM01120 ACPL_7328 ACPL_7328 SM01121 ACPL_7328 ACPL_7339 SM00563 Phosphate acyltransferases ACPL_7345 SM00411 bacterial (prokaryotic) histone like domain ACPL_7348 SM00346 helix_turn_helix isocitrate lyase regulation ACPL_7350 SM00530 Helix-turn-helix XRE-family like proteins ACPL_7352 SM00382 ATPases associated with a variety of cellular activities ACPL_7355 SM00404 Protein tyrosine phosphatase, catalytic domain motif ACPL_7356 SM00917 LeuA allosteric (dimerisation) domain ACPL_7366 SM01329 ACPL_7366 ACPL_7372 SM00052 Putative diguanylate phosphodiesterase ACPL_7372 SM00267 diguanylate cyclase ACPL_7374 SM00060 Fibronectin type 3 domain ACPL_7377 SM00862 Transcriptional regulatory protein, C terminal ACPL_7377 SM01043 Bacterial transcriptional activator domain ACPL_7378 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins ACPL_7380 SM00354 helix_turn _helix lactose operon repressor ACPL_7381 SM00052 Putative diguanylate phosphodiesterase ACPL_7381 SM00091 PAS domain ACPL_7381 SM00267 diguanylate cyclase ACPL_7385 SM00845 GatB domain ACPL_7389 SM00052 Putative diguanylate phosphodiesterase ACPL_7389 SM00267 diguanylate cyclase ACPL_7390 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ACPL_7390 SM00292 breast cancer carboxy-terminal domain ACPL_7390 SM00532 Ligase N family ACPL_7394 SM00893 Electron transfer flavoprotein domain ACPL_7395 SM00893 Electron transfer flavoprotein domain ACPL_7407 SM00382 ATPases associated with a variety of cellular activities ACPL_7417 SM00382 ATPases associated with a variety of cellular activities ACPL_7425 SM00382 ATPases associated with a variety of cellular activities ACPL_7445 SM00382 ATPases associated with a variety of cellular activities ACPL_7459 SM00226 Low molecular weight phosphatase family ACPL_7462 SM00267 diguanylate cyclase ACPL_7463 SM00564 beta-propeller repeat ACPL_7464 SM00937 ACPL_7464 ACPL_7470 SM00357 Cold shock protein domain ACPL_7470 SM00382 ATPases associated with a variety of cellular activities ACPL_7470 SM00959 Rho termination factor, N-terminal domain ACPL_7474 SM00347 helix_turn_helix multiple antibiotic resistance protein ACPL_7479 SM00836 DALR anticodon binding domain ACPL_7479 SM01016 Arginyl tRNA synthetase N terminal dom ACPL_7487 SM00861 Transketolase, pyrimidine binding domain ACPL_7490 SM00859 Semialdehyde dehydrogenase, NAD binding domain ACPL_7500 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ACPL_7501 SM00220 Serine/Threonine protein kinases, catalytic domain ACPL_7502 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain ACPL_7508 SM00342 helix_turn_helix, arabinose operon control protein ACPL_7517 SM00822 ACPL_7517 ACPL_7518 SM00642 Alpha-amylase domain ACPL_7521 SM00495 Chitin-binding domain type 3 ACPL_7522 SM00495 Chitin-binding domain type 3 ACPL_7522 SM00636 ACPL_7522 ACPL_7523 SM00606 Cellulose Binding Domain Type IV ACPL_7528 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain ACPL_7528 SM01232 ACPL_7528 ACPL_7535 SM00563 Phosphate acyltransferases ACPL_7539 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ACPL_7540 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPL_7540 SM00387 Histidine kinase-like ATPases ACPL_7540 SM00388 His Kinase A (phosphoacceptor) domain ACPL_7541 SM00448 cheY-homologous receiver domain ACPL_7541 SM00862 Transcriptional regulatory protein, C terminal ACPL_7542 SM00563 Phosphate acyltransferases ACPL_7545 SM00861 Transketolase, pyrimidine binding domain ACPL_7550 SM00829 Enoylreductase ACPL_7551 SM00919 Malic enzyme, NAD binding domain ACPL_7551 SM01274 ACPL_7551 ACPL_7555 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACPL_7555 SM00895 ACPL_7555 ACPL_7557 SM00046 Diacylglycerol kinase catalytic domain (presumed) ACPL_7563 SM00387 Histidine kinase-like ATPases ACPL_7565 SM00028 Tetratricopeptide repeats ACPL_7578 SM00458 Ricin-type beta-trefoil ACPL_759 SM00450 Rhodanese Homology Domain ACPL_7593 SM00320 WD40 repeats ACPL_7595 SM00347 helix_turn_helix multiple antibiotic resistance protein ACPL_7597 SM00530 Helix-turn-helix XRE-family like proteins ACPL_7598 SM00458 Ricin-type beta-trefoil ACPL_7611 SM00341 Helicase and RNase D C-terminal ACPL_7619 SM00382 ATPases associated with a variety of cellular activities ACPL_762 SM00052 Putative diguanylate phosphodiesterase ACPL_762 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPL_762 SM00267 diguanylate cyclase ACPL_7622 SM00563 Phosphate acyltransferases ACPL_7623 SM00357 Cold shock protein domain ACPL_7634 SM00422 helix_turn_helix, mercury resistance ACPL_7659 SM00382 ATPases associated with a variety of cellular activities ACPL_7660 SM00382 ATPases associated with a variety of cellular activities ACPL_7669 SM00028 Tetratricopeptide repeats ACPL_7669 SM00421 helix_turn_helix, Lux Regulon ACPL_767 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. ACPL_7670 SM00829 Enoylreductase ACPL_7681 SM01208 ACPL_7681 ACPL_7682 SM00347 helix_turn_helix multiple antibiotic resistance protein ACPL_7689 SM00342 helix_turn_helix, arabinose operon control protein ACPL_7689 SM00478 endonuclease III ACPL_7689 SM01009 AlkA N-terminal domain ACPL_769 SM00382 ATPases associated with a variety of cellular activities ACPL_7706 SM00020 Trypsin-like serine protease ACPL_7708 SM00670 Large family of predicted nucleotide-binding domains ACPL_7722 SM00220 Serine/Threonine protein kinases, catalytic domain ACPL_7727 SM00878 Biotin carboxylase C-terminal domain ACPL_7735 SM00849 Metallo-beta-lactamase superfamily ACPL_7739 SM00220 Serine/Threonine protein kinases, catalytic domain ACPL_774 SM00663 RNA polymerase I subunit A N-terminus ACPL_7743 SM00984 UDP binding domain ACPL_7754 SM01133 ACPL_7754 ACPL_7762 SM00960 Roadblock/LC7 domain ACPL_7763 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPL_7763 SM00387 Histidine kinase-like ATPases ACPL_7767 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain ACPL_7771 SM00382 ATPases associated with a variety of cellular activities ACPL_7788 SM01400 ACPL_7788 ACPL_779 SM00838 Elongation factor G C-terminus ACPL_779 SM00889 Elongation factor G, domain IV ACPL_7793 SM00382 ATPases associated with a variety of cellular activities ACPL_7795 SM00650 Ribosomal RNA adenine dimethylases ACPL_7804 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPL_7804 SM00387 Histidine kinase-like ATPases ACPL_781 SM01403 ACPL_781 ACPL_7810 SM00852 Probable molybdopterin binding domain ACPL_7812 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACPL_7812 SM00267 diguanylate cyclase ACPL_7812 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPL_7814 SM00834 Putative regulatory protein ACPL_7829 SM00306 Hint (Hedgehog/Intein) domain N-terminal region ACPL_7830 SM00881 CoA binding domain ACPL_7837 SM00924 MgtE intracellular N domain ACPL_7841 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ACPL_785 SM01382 ACPL_785 ACPL_785 SM01383 ACPL_785 ACPL_7855 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain ACPL_7860 SM01004 Delta-aminolevulinic acid dehydratase ACPL_7864 SM00881 CoA binding domain ACPL_7870 SM00563 Phosphate acyltransferases ACPL_7872 SM01155 ACPL_7872 ACPL_7878 SM00448 cheY-homologous receiver domain ACPL_7878 SM00862 Transcriptional regulatory protein, C terminal ACPL_7879 SM00387 Histidine kinase-like ATPases ACPL_7879 SM00388 His Kinase A (phosphoacceptor) domain ACPL_788 SM00322 K homology RNA-binding domain ACPL_7881 SM00855 Phosphoglycerate mutase family ACPL_7888 SM00448 cheY-homologous receiver domain ACPL_7891 SM00387 Histidine kinase-like ATPases ACPL_7891 SM00388 His Kinase A (phosphoacceptor) domain ACPL_7909 SM00382 ATPases associated with a variety of cellular activities ACPL_792 SM01374 ACPL_792 ACPL_7929 SM00448 cheY-homologous receiver domain ACPL_793 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. ACPL_7931 SM00448 cheY-homologous receiver domain ACPL_7932 SM00138 Methyltransferase, chemotaxis proteins ACPL_7933 SM00448 cheY-homologous receiver domain ACPL_7935 SM00260 Two component signalling adaptor domain ACPL_7936 SM00073 Histidine Phosphotransfer domain ACPL_7936 SM00260 Two component signalling adaptor domain ACPL_7936 SM00387 Histidine kinase-like ATPases ACPL_7936 SM01231 ACPL_7936 ACPL_7937 SM00448 cheY-homologous receiver domain ACPL_7937 SM00862 Transcriptional regulatory protein, C terminal ACPL_7942 SM00354 helix_turn _helix lactose operon repressor ACPL_7943 SM00506 Appr-1"-p processing enzyme ACPL_7949 SM00530 Helix-turn-helix XRE-family like proteins ACPL_7960 SM00491 ACPL_7960 ACPL_7968 SM00382 ATPases associated with a variety of cellular activities ACPL_7973 SM00862 Transcriptional regulatory protein, C terminal ACPL_7976 SM00450 Rhodanese Homology Domain ACPL_7981 SM00883 Chaperonin 10 Kd subunit ACPL_7991 SM00382 ATPases associated with a variety of cellular activities ACPL_7991 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain ACPL_7992 SM00382 ATPases associated with a variety of cellular activities ACPL_7995 SM00382 ATPases associated with a variety of cellular activities ACPL_7996 SM00420 helix_turn_helix, Deoxyribose operon repressor ACPL_7996 SM01134 ACPL_7996 ACPL_8000 SM00382 ATPases associated with a variety of cellular activities ACPL_8002 SM00387 Histidine kinase-like ATPases ACPL_8003 SM00421 helix_turn_helix, Lux Regulon ACPL_8003 SM00448 cheY-homologous receiver domain ACPL_8004 SM00849 Metallo-beta-lactamase superfamily ACPL_8005 SM00347 helix_turn_helix multiple antibiotic resistance protein ACPL_8006 SM00014 Acid phosphatase homologues ACPL_8014 SM00382 ATPases associated with a variety of cellular activities ACPL_8017 SM00306 Hint (Hedgehog/Intein) domain N-terminal region ACPL_8019 SM00967 RNA 2'-O ribose methyltransferase substrate binding ACPL_8020 SM00840 ACPL_8020 ACPL_8023 SM00862 Transcriptional regulatory protein, C terminal ACPL_8023 SM01043 Bacterial transcriptional activator domain ACPL_8027 SM00344 helix_turn_helix ASNC type ACPL_8033 SM00564 beta-propeller repeat ACPL_8035 SM00028 Tetratricopeptide repeats ACPL_8038 SM01058 CarD-like/TRCF domain ACPL_8045 SM00382 ATPases associated with a variety of cellular activities ACPL_8051 SM00478 endonuclease III ACPL_8056 SM00382 ATPases associated with a variety of cellular activities ACPL_8056 SM01086 C-terminal, D2-small domain, of ClpB protein ACPL_8072 SM00382 ATPases associated with a variety of cellular activities ACPL_8078 SM00905 Dihydroneopterin aldolase ACPL_8090 SM00382 ATPases associated with a variety of cellular activities ACPL_8097 SM00382 ATPases associated with a variety of cellular activities ACPL_810 SM00363 S4 RNA-binding domain ACPL_810 SM01390 ACPL_810 ACPL_8102 SM00478 endonuclease III ACPL_8102 SM00525 ACPL_8102 ACPL_8103 SM00854 Bacterial capsule synthesis protein PGA_cap ACPL_8104 SM00100 Cyclic nucleotide-monophosphate binding domain ACPL_8104 SM00419 helix_turn_helix, cAMP Regulatory protein ACPL_8106 SM00878 Biotin carboxylase C-terminal domain ACPL_8107 SM00220 Serine/Threonine protein kinases, catalytic domain ACPL_8108 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain ACPL_8109 SM00849 Metallo-beta-lactamase superfamily ACPL_811 SM00662 RNA polymerases D ACPL_8121 SM00859 Semialdehyde dehydrogenase, NAD binding domain ACPL_8124 SM00917 LeuA allosteric (dimerisation) domain ACPL_8127 SM00382 ATPases associated with a variety of cellular activities ACPL_8128 SM00382 ATPases associated with a variety of cellular activities ACPL_8132 SM00493 ACPL_8132 ACPL_8134 SM00382 ATPases associated with a variety of cellular activities ACPL_8146 SM00481 DNA polymerase alpha chain like domain ACPL_8149 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPL_8149 SM00387 Histidine kinase-like ATPases ACPL_8150 SM00960 Roadblock/LC7 domain ACPL_816 SM00382 ATPases associated with a variety of cellular activities ACPL_8160 SM00637 ACPL_8160 ACPL_8163 SM00267 diguanylate cyclase ACPL_8168 SM00530 Helix-turn-helix XRE-family like proteins ACPL_8171 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ACPL_8175 SM00564 beta-propeller repeat ACPL_8177 SM00495 Chitin-binding domain type 3 ACPL_8178 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPL_8178 SM00388 His Kinase A (phosphoacceptor) domain ACPL_8179 SM00448 cheY-homologous receiver domain ACPL_8179 SM00862 Transcriptional regulatory protein, C terminal ACPL_8186 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ACPL_8190 SM00382 ATPases associated with a variety of cellular activities ACPL_8197 SM00926 Molybdopterin oxidoreductase Fe4S4 domain ACPL_8204 SM00060 Fibronectin type 3 domain ACPL_8209 SM00020 Trypsin-like serine protease ACPL_8212 SM00347 helix_turn_helix multiple antibiotic resistance protein ACPL_8214 SM00495 Chitin-binding domain type 3 ACPL_8215 SM00052 Putative diguanylate phosphodiesterase ACPL_8220 SM01192 ACPL_8220 ACPL_8220 SM01193 ACPL_8220 ACPL_8221 SM00422 helix_turn_helix, mercury resistance ACPL_8223 SM00342 helix_turn_helix, arabinose operon control protein ACPL_8227 SM00387 Histidine kinase-like ATPases ACPL_8227 SM00388 His Kinase A (phosphoacceptor) domain ACPL_8227 SM00448 cheY-homologous receiver domain ACPL_8245 SM00481 DNA polymerase alpha chain like domain ACPL_8249 SM00530 Helix-turn-helix XRE-family like proteins ACPL_8256 SM00829 Enoylreductase ACPL_8260 SM00422 helix_turn_helix, mercury resistance ACPL_8262 SM00861 Transketolase, pyrimidine binding domain ACPL_8276 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain ACPL_8276 SM01232 ACPL_8276 ACPL_8279 SM00387 Histidine kinase-like ATPases ACPL_828 SM00387 Histidine kinase-like ATPases ACPL_8280 SM00448 cheY-homologous receiver domain ACPL_8280 SM00850 LytTr DNA-binding domain ACPL_8281 SM00448 cheY-homologous receiver domain ACPL_8281 SM00862 Transcriptional regulatory protein, C terminal ACPL_8282 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACPL_8282 SM00387 Histidine kinase-like ATPases ACPL_8282 SM00388 His Kinase A (phosphoacceptor) domain ACPL_8287 SM00382 ATPases associated with a variety of cellular activities ACPL_829 SM00960 Roadblock/LC7 domain ACPL_8291 SM00903 Flavin reductase like domain ACPL_8295 SM00450 Rhodanese Homology Domain ACPL_8297 SM00387 Histidine kinase-like ATPases ACPL_8297 SM00388 His Kinase A (phosphoacceptor) domain ACPL_8313 SM00344 helix_turn_helix ASNC type ACPL_832 SM00862 Transcriptional regulatory protein, C terminal ACPL_8321 SM00729 Elongator protein 3, MiaB family, Radical SAM ACPL_8331 SM00852 Probable molybdopterin binding domain ACPL_8332 SM00852 Probable molybdopterin binding domain ACPL_8334 SM00052 Putative diguanylate phosphodiesterase ACPL_8334 SM00267 diguanylate cyclase ACPL_8338 SM00382 ATPases associated with a variety of cellular activities ACPL_8347 SM00518 AP endonuclease family 2 ACPL_8354 SM00854 Bacterial capsule synthesis protein PGA_cap ACPL_8365 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ACPL_8368 SM00220 Serine/Threonine protein kinases, catalytic domain ACPL_8373 SM00646 ACPL_8373 ACPL_8379 SM00470 ParB-like nuclease domain ACPL_8382 SM00393 Putative single-stranded nucleic acids-binding domain ACPL_844 SM01005 Alanine racemase, C-terminal domain ACPL_847 SM00986 Uracil DNA glycosylase superfamily ACPL_847 SM00987 UreE urease accessory protein, C-terminal domain ACPL_853 SM00382 ATPases associated with a variety of cellular activities ACPL_855 SM00883 Chaperonin 10 Kd subunit ACPL_859 SM00382 ATPases associated with a variety of cellular activities ACPL_867 SM00421 helix_turn_helix, Lux Regulon ACPL_869 SM00116 Domain in cystathionine beta-synthase and other proteins. ACPL_869 SM01240 ACPL_869 ACPL_870 SM01240 ACPL_870 ACPL_881 SM00421 helix_turn_helix, Lux Regulon ACPL_881 SM00448 cheY-homologous receiver domain ACPL_885 SM00382 ATPases associated with a variety of cellular activities ACPL_886 SM00382 ATPases associated with a variety of cellular activities ACPL_887 SM00830 Chorismate mutase type II ACPL_894 SM00881 CoA binding domain ACPL_897 SM00798 AICARFT/IMPCHase bienzyme ACPL_897 SM00851 MGS-like domain ACPL_900 SM01329 ACPL_900 ACPL_902 SM00420 helix_turn_helix, Deoxyribose operon repressor ACPL_902 SM01134 ACPL_902 ACPL_917 SM00382 ATPases associated with a variety of cellular activities ACPL_919 SM00382 ATPases associated with a variety of cellular activities ACPL_921 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ACPL_927 SM00487 DEAD-like helicases superfamily ACPL_927 SM00490 helicase superfamily c-terminal domain ACPL_927 SM00982 ACPL_927 ACPL_927 SM01058 CarD-like/TRCF domain ACPL_933 SM01192 ACPL_933 ACPL_933 SM01193 ACPL_933 ACPL_939 SM00986 Uracil DNA glycosylase superfamily ACPL_939 SM00987 UreE urease accessory protein, C-terminal domain ACPL_952 SM00116 Domain in cystathionine beta-synthase and other proteins. ACPL_953 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ACPL_958 SM00880 ACPL_958 ACPL_958 SM01118 ACPL_958 ACPL_972 SM00052 Putative diguanylate phosphodiesterase ACPL_972 SM00267 diguanylate cyclase ACPL_976 SM01001 AIR carboxylase ACPL_985 SM00052 Putative diguanylate phosphodiesterase ACPL_985 SM00267 diguanylate cyclase ACPL_989 SM00382 ATPases associated with a variety of cellular activities ACPL_991 SM00028 Tetratricopeptide repeats ACPL_991 SM00862 Transcriptional regulatory protein, C terminal ACPL_991 SM01043 Bacterial transcriptional activator domain ACPL_995 SM00421 helix_turn_helix, Lux Regulon