locus_tag old_locus_tag gene Name start end strand product note type ID NCBI Amir_0001 Amir_0001 Amir_0001 98 1831 + chromosomal replication initiator protein DnaA KEGG: bha:BH0001 chromosomal replication initiation protein~TIGRFAM: chromosomal replication initiator protein DnaA~PFAM: Chromosomal replication initiator DnaA%3B Chromosomal replication initiator DnaA domain~SMART: Chromosomal replication initiator DnaA domain%3B AAA ATPase gene gene0 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0001 Amir_0002 Amir_0002 Amir_0002 2628 3764 + DNA polymerase III%2C beta subunit KEGG: azc:AZC_1013 DNA polymerase III subunit beta~TIGRFAM: DNA polymerase III%2C beta subunit~PFAM: DNA polymerase III beta chain~SMART: DNA polymerase III beta chain gene gene1 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0002 Amir_0003 Amir_0003 Amir_0003 3806 4720 + 6-phosphogluconate dehydrogenase%2C decarboxylating TIGRFAM: 6-phosphogluconate dehydrogenase%2C decarboxylating~PFAM: 6-phosphogluconate dehydrogenase NAD-binding%3B 6-phosphogluconate dehydrogenase domain protein%3B NADP oxidoreductase coenzyme F420-dependent~KEGG: dde:Dde_3470 6-phosphogluconate dehydrogenase- like protein gene gene2 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0003 Amir_0004 Amir_0004 Amir_0004 4728 5843 + DNA replication and repair protein RecF TIGRFAM: DNA replication and repair protein RecF~PFAM: SMC domain protein~KEGG: bsu:BSU00040 recombination protein F gene gene3 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0004 Amir_0005 Amir_0005 Amir_0005 6031 6462 + protein of unknown function DUF721 PFAM: protein of unknown function DUF721~KEGG: protein of unknown function DUF721 gene gene4 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0005 Amir_0006 Amir_0006 Amir_0006 6701 8674 + DNA gyrase%2C B subunit KEGG: bha:BH0006 DNA gyrase subunit B~TIGRFAM: DNA gyrase%2C B subunit~PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein%3B DNA gyrase subunit B domain protein%3B TOPRIM domain protein%3B ATP-binding region ATPase domain protein~SMART: DNA topoisomerase II%3B ATP-binding region ATPase domain protein gene gene5 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0006 Amir_0007 Amir_0007 Amir_0007 8721 11243 + DNA gyrase%2C A subunit KEGG: sus:Acid_3975 DNA gyrase subunit A~TIGRFAM: DNA gyrase%2C A subunit~PFAM: DNA gyrase/topoisomerase IV subunit A%3B DNA gyrase repeat beta-propeller~SMART: DNA gyrase/topoisomerase IV subunit A gene gene6 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0007 Amir_0008 Amir_0008 Amir_0008 11278 12144 + hypothetical protein KEGG: hypothetical protein gene gene7 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0008 Amir_0009 Amir_0009 Amir_0009 12309 12428 + hypothetical protein gene gene9 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0009 Amir_0010 Amir_0010 Amir_0010 12873 13304 - DoxX family protein PFAM: DoxX family protein~KEGG: gur:Gura_3338 DoxX family protein gene gene11 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0010 Amir_0011 Amir_0011 Amir_0011 13441 13986 + hypothetical protein KEGG: similar to Host cell factor C1 gene gene12 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0011 Amir_0012 Amir_0012 Amir_0012 14069 14509 - hypothetical protein KEGG: rpt:Rpal_3590 putative histon H1 gene gene13 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0012 Amir_0013 Amir_0013 Amir_0013 14769 15317 + Peptidylprolyl isomerase PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type~KEGG: bba:Bd0177 peptidyl-prolyl cis-trans isomerase gene gene14 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0013 Amir_0014 Amir_0014 Amir_0014 15317 16213 + Rhomboid family protein PFAM: Rhomboid family protein~KEGG: bsu:BSU24870 hypothetical protein gene gene15 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0014 Amir_0015 Amir_0015 Amir_0015 16463 16885 - hypothetical protein gene gene16 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0015 Amir_0016 Amir_0016 Amir_0016 17118 17384 - protein of unknown function UPF0233 PFAM: protein of unknown function UPF0233 gene gene17 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0016 Amir_0017 Amir_0017 Amir_0017 17775 18836 + sortase family protein TIGRFAM: sortase family protein~PFAM: peptidase C60 sortase A and B~KEGG: sus:Acid_5377 sortase family protein gene gene18 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0017 Amir_0018 Amir_0018 Amir_0018 18838 18996 + hypothetical protein gene gene19 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0018 Amir_0019 Amir_0019 Amir_0019 19042 20388 - Ferredoxin--NADP(+) reductase PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase~KEGG: ade:Adeh_3296 FAD-dependent pyridine nucleotide-disulphide oxidoreductase gene gene20 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0019 Amir_0020 Amir_0020 Amir_0020 20454 21095 + glutamine amidotransferase of anthranilate synthase TIGRFAM: glutamine amidotransferase of anthranilate synthase~PFAM: glutamine amidotransferase class-I~KEGG: swi:Swit_3227 anthranilate synthase%2C component II gene gene21 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0020 Amir_0021 Amir_0021 Amir_0021 21196 23241 - serine/threonine protein kinase with PASTA sensor(s) PFAM: Serine/threonine protein kinase-related%3B tyrosine protein kinase%3B PASTA domain containing protein~SMART: serine/threonine protein kinase%3B tyrosine protein kinase%3B PASTA domain containing protein~KEGG: bha:BH2504 serine/threonine protein kinase gene gene22 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0021 Amir_0022 Amir_0022 Amir_0022 23322 25025 - serine/threonine protein kinase PFAM: Serine/threonine protein kinase-related%3B tyrosine protein kinase~SMART: serine/threonine protein kinase%3B tyrosine protein kinase~KEGG: ade:Adeh_3649 serine/threonine protein kinase gene gene23 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0022 Amir_0023 Amir_0023 Amir_0023 25025 26491 - Peptidoglycan glycosyltransferase PFAM: penicillin-binding protein transpeptidase~KEGG: penicillin-binding protein 2%3B K05515 penicillin binding protein 2 gene gene24 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0023 Amir_0024 Amir_0024 Amir_0024 26488 27951 - cell cycle protein PFAM: cell cycle protein~KEGG: bcb:BCB4264_A4012 stage V sporulation protein E gene gene25 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0024 Amir_0025 Amir_0025 Amir_0025 27955 29379 - protein serine/threonine phosphatase PFAM: Protein phosphatase 2C-like~SMART: protein phosphatase 2C domain protein~KEGG: tgr:Tgr7_0952 protein phosphatase 2C-like protein gene gene26 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0025 Amir_0026 Amir_0026 Amir_0026 29376 29840 - FHA domain containing protein PFAM: Forkhead-associated protein~SMART: Forkhead-associated protein~KEGG: mxa:MXAN_4649 FHA domain protein gene gene27 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0026 Amir_0027 Amir_0027 Amir_0027 29891 31153 - FHA domain containing protein PFAM: Forkhead-associated protein~SMART: Forkhead-associated protein~KEGG: eba:ebA2155 hypothetical protein gene gene28 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0027 Amir_0028 Amir_0028 Amir_0028 31797 32417 + hypothetical protein gene gene30 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0028 Amir_0029 Amir_0029 Amir_0029 32468 33103 + NAD-dependent epimerase/dehydratase PFAM: NAD-dependent epimerase/dehydratase~KEGG: xca:xccb100_0085 hypothetical protein gene gene31 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0029 Amir_0030 Amir_0030 Amir_0030 33316 34593 - FAD-linked oxidoreductase KEGG: bur:Bcep18194_B3008 FAD-linked oxidoreductase~TIGRFAM: FAD-linked oxidoreductase~PFAM: D-arabinono-14-lactone oxidase%3B FAD linked oxidase domain protein gene gene32 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0030 Amir_0031 Amir_0031 Amir_0031 34677 35864 + alanine racemase domain protein PFAM: alanine racemase domain protein~KEGG: bur:Bcep18194_B3007 amino acid aldolase or racemase-like gene gene33 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0031 Amir_0032 Amir_0032 Amir_0032 35861 36493 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: scl:sce5559 HTH-type transcriptional regulator BetI gene gene34 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0032 Amir_0033 Amir_0033 Amir_0033 36613 37875 + beta-galactosidase TIGRFAM: beta-galactosidase~PFAM: glycoside hydrolase family 1~KEGG: hch:HCH_06907 beta-glucosidase/6-phospho-beta- glucosidase/beta-galactosidase gene gene35 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0033 Amir_0034 Amir_0034 Amir_0034 37872 39179 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: ccs:CCNA_02400 transporter%2C major facilitator superfamily gene gene36 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0034 Amir_0035 Amir_0035 Amir_0035 39176 39943 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B KR domain protein~KEGG: hypothetical protein gene gene37 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0035 Amir_0036 Amir_0036 Amir_0036 40316 40678 - hypothetical protein gene gene38 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0036 Amir_0037 Amir_0037 Amir_0037 41233 42615 + transcriptional regulator%2C XRE family PFAM: helix-turn-helix domain protein~SMART: helix-turn-helix domain protein%3B Tetratricopeptide domain protein~KEGG: hypothetical protein gene gene39 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0037 Amir_0038 Amir_0038 Amir_0038 42689 43585 + aminoglycoside phosphotransferase PFAM: aminoglycoside phosphotransferase~KEGG: bcz:BCZK4351 homoserine kinase type II (protein kinase fold) gene gene40 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0038 Amir_0039 Amir_0039 Amir_0039 43715 43996 + hypothetical protein gene gene41 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0039 Amir_0040 Amir_0040 Amir_0040 44172 45191 - copper resistance D domain protein PFAM: copper resistance D domain protein~KEGG: bja:bll4878 copper export protein gene gene42 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0040 Amir_0041 Amir_0041 Amir_0041 45188 45736 - copper resistance protein CopC PFAM: copper resistance protein CopC~KEGG: bra:BRADO4155 copper resistance protein gene gene43 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0041 Amir_0042 Amir_0042 Amir_0042 45733 46482 - nuclear export factor GLE1 PFAM: nuclear export factor GLE1~KEGG: sme:SMa1200 hypothetical protein gene gene44 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0042 Amir_0043 Amir_0043 Amir_0043 46508 47065 - hypothetical protein KEGG: bxe:Bxe_B0776 putative membrane glycoprotein gene gene45 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0043 Amir_0044 Amir_0044 Amir_0044 47159 48991 + choline/carnitine/betaine transporter TIGRFAM: choline/carnitine/betaine transporter~PFAM: BCCT transporter~KEGG: ppw:PputW619_2676 choline/carnitine/betaine transporter gene gene46 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0044 Amir_0045 Amir_0045 Amir_0045 49044 49484 - hypothetical protein gene gene47 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0045 Amir_0046 Amir_0046 Amir_0046 49586 51220 + nuclease (RecB family)-like protein gene gene48 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0046 Amir_0047 Amir_0047 Amir_0047 51262 52014 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B KR domain protein%3B NAD-dependent epimerase/dehydratase~KEGG: bac:BamMC406_2467 short-chain dehydrogenase/reductase SDR gene gene49 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0047 Amir_0048 Amir_0048 Amir_0048 52050 52175 - hypothetical protein gene gene50 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0048 Amir_0049 Amir_0049 Amir_0049 52353 54134 + Gamma-glutamyltransferase PFAM: gamma-glutamyltranspeptidase~KEGG: bbt:BBta_2852 putative gamma- glutamyltranspeptidase gene gene51 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0049 Amir_0050 Amir_0050 Amir_0050 54212 54541 - hypothetical protein gene gene52 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0050 Amir_0051 Amir_0051 Amir_0051 55503 55877 - hypothetical protein gene gene53 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0051 Amir_0052 Amir_0052 Amir_0052 56251 57537 + hypothetical protein KEGG: azc:AZC_0951 hypothetical protein gene gene54 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0052 Amir_0053 Amir_0053 Amir_0053 57672 59063 + hypothetical protein KEGG: FAP262%3B flagellar associated protein gene gene55 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0053 Amir_0054 Amir_0054 Amir_0054 59060 60733 + glycosyl transferase family 2 PFAM: glycosyl transferase family 2~KEGG: rce:RC1_0824 glycosyl transferase family protein gene gene56 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0054 Amir_0055 Amir_0055 Amir_0055 60861 64376 - glycosyl transferase family 2 PFAM: glycosyl transferase family 2%3B Methyltransferase type 12%3B Methyltransferase type 11~KEGG: ppf:Pput_3926 glycosyl transferase family protein gene gene57 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0055 Amir_0056 Amir_0056 Amir_0056 64376 65581 - hypothetical protein KEGG: sus:Acid_4178 ribonuclease gene gene58 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0056 Amir_0057 Amir_0057 Amir_0057 65703 68078 - glycosyl transferase group 1 PFAM: glycosyl transferase group 1~KEGG: xcb:XC_3634 glycosyltransferase gene gene59 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0057 Amir_0058 Amir_0058 Amir_0058 68337 69401 - Methyltransferase type 11 PFAM: Methyltransferase type 11%3B Methyltransferase type 12~KEGG: swi:Swit_4011 methyltransferase type 12 gene gene60 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0058 Amir_0059 Amir_0059 Amir_0059 69961 70266 - hypothetical protein gene gene61 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0059 Amir_0060 Amir_0060 Amir_0060 70271 70696 - OsmC family protein PFAM: OsmC family protein~KEGG: mlo:mlr4254 osmotically inducible protein C%2C putative ATP/GTP binding protein gene gene62 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0060 Amir_0061 Amir_0061 Amir_0061 70942 71337 - hypothetical protein gene gene64 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0061 Amir_0062 Amir_0062 Amir_0062 71534 73003 + RNA polymerase%2C sigma-24 subunit%2C ECF subfamily TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family~PFAM: sigma-70 region 2 domain protein~KEGG: afw:Anae109_0839 ECF subfamily RNA polymerase sigma-24 factor gene gene65 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0062 Amir_0063 Amir_0063 Amir_0063 73127 73564 + hypothetical protein gene gene66 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0063 Amir_0064 Amir_0064 Amir_0064 73786 75072 + signal transduction histidine kinase%2C LytS PFAM: histidine kinase internal region%3B ATP-binding region ATPase domain protein~SMART: ATP-binding region ATPase domain protein~KEGG: signal transduction histidine kinase%2C LytS%3B K07704 two-component system%2C LytT family%2C sensor histidine kinase LytS gene gene67 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0064 Amir_0065 Amir_0065 Amir_0065 75077 75244 - hypothetical protein gene gene68 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0065 Amir_0066 Amir_0066 Amir_0066 75285 76157 + peptidase S49 PFAM: peptidase S49~KEGG: rce:RC1_1672 proteinase SohB%2C putative gene gene69 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0066 Amir_0067 Amir_0067 Amir_0067 76254 77081 + two component transcriptional regulator%2C LytTR family PFAM: LytTr DNA-binding region%3B response regulator receiver~SMART: response regulator receiver~KEGG: gur:Gura_2791 LytTR family two component transcriptional regulator gene gene70 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0067 Amir_0068 Amir_0068 Amir_0068 77078 77500 + hypothetical protein gene gene71 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0068 Amir_0069 Amir_0069 Amir_0069 77504 79315 + Na+/solute symporter PFAM: Na+/solute symporter~KEGG: dac:Daci_5957 SSS family solute/sodium (Na+) symporter gene gene72 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0069 Amir_0070 Amir_0070 Amir_0070 79609 79965 + protein of unknown function DUF485 PFAM: protein of unknown function DUF485~KEGG: gme:Gmet_3287 hypothetical protein gene gene73 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0070 Amir_0071 Amir_0071 Amir_0071 79962 81548 + SSS sodium solute transporter superfamily TIGRFAM: SSS sodium solute transporter superfamily~PFAM: Na+/solute symporter~KEGG: bca:BCE_1726 sodium/solute symporter family protein gene gene74 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0071 Amir_0072 Amir_0072 Amir_0072 81691 82116 + DNA binding domain protein%2C excisionase family TIGRFAM: DNA binding domain protein%2C excisionase family~KEGG: maq:Maqu_3385 DNA binding domain-containing protein gene gene75 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0072 Amir_0073 Amir_0073 Amir_0073 82184 82774 + hypothetical protein KEGG: lpc:LPC_2191 hypothetical protein gene gene76 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0073 Amir_0074 Amir_0074 Amir_0074 82815 83162 + Rhodanese domain protein PFAM: Rhodanese domain protein~SMART: Rhodanese domain protein~KEGG: rfr:Rfer_3913 rhodanese-like protein gene gene77 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0074 Amir_0075 Amir_0075 Amir_0075 83164 84072 + hypothetical protein KEGG: sfu:Sfum_2194 hypothetical protein gene gene78 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0075 Amir_0076 Amir_0076 Amir_0076 84163 85212 + glycerophosphoryl diester phosphodiesterase PFAM: glycerophosphoryl diester phosphodiesterase~KEGG: hypothetical protein gene gene79 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0076 Amir_0077 Amir_0077 Amir_0077 85244 86476 - cytochrome P450 PFAM: cytochrome P450~KEGG: jan:Jann_1726 cytochrome P450 gene gene80 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0077 Amir_0078 Amir_0078 Amir_0078 86596 87294 + glycerophosphoryl diester phosphodiesterase PFAM: glycerophosphoryl diester phosphodiesterase~KEGG: gbm:Gbem_3150 glycerophosphoryl diester phosphodiesterase gene gene81 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0078 Amir_0079 Amir_0079 Amir_0079 87313 88257 + SEC-C motif domain protein PFAM: SEC-C motif domain protein gene gene82 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0079 Amir_0080 Amir_0080 Amir_0080 88330 88656 + protein of unknown function DUF952 PFAM: protein of unknown function DUF952~KEGG: rru:Rru_A0513 hypothetical protein gene gene83 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0080 Amir_0081 Amir_0081 Amir_0081 88777 89808 + Phenylacetaldoxime dehydratase KEGG: xau:Xaut_1560 phenylacetaldoxime dehydratase gene gene84 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0081 Amir_0082 Amir_0082 Amir_0082 89920 90483 - Ferritin Dps family protein PFAM: Ferritin Dps family protein~KEGG: hypothetical protein gene gene85 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0082 Amir_0083 Amir_0083 Amir_0083 90632 91879 - arginine deiminase KEGG: ses:SARI_03184 arginine deiminase~TIGRFAM: arginine deiminase~PFAM: amidinotransferase gene gene86 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0083 Amir_0084 Amir_0084 Amir_0084 92019 92672 - conserved hypothetical protein KEGG: bha:BH0832 hypothetical protein gene gene87 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0084 Amir_0085 Amir_0085 Amir_0085 92746 93540 - Abortive infection protein PFAM: Abortive infection protein~KEGG: dal:Dalk_0566 abortive infection protein gene gene88 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0085 Amir_0086 Amir_0086 Amir_0086 93550 94308 - hypothetical protein KEGG: scl:sce4194 hypothetical protein gene gene89 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0086 Amir_0087 Amir_0087 Amir_0087 94407 95036 + hypothetical protein gene gene90 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0087 Amir_0088 Amir_0088 Amir_0088 95197 96399 - homogentisate 12-dioxygenase PFAM: homogentisate 12-dioxygenase~KEGG: bcz:BCZK0217 homogentisate 1%2C2-dioxygenase gene gene91 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0088 Amir_0089 Amir_0089 Amir_0089 96535 97335 + hypothetical protein KEGG: sus:Acid_6517 hypothetical protein gene gene92 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0089 Amir_0090 Amir_0090 Amir_0090 97332 98516 + Fumarylacetoacetase PFAM: fumarylacetoacetate (FAA) hydrolase%3B Domain of unknown function DUF1969~KEGG: jan:Jann_1436 fumarylacetoacetate hydrolase gene gene93 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0090 Amir_0091 Amir_0091 Amir_0091 98519 99178 + transcriptional regulator%2C IclR family PFAM: regulatory protein IclR~SMART: regulatory protein IclR~KEGG: dac:Daci_0951 IclR family transcriptional regulator gene gene94 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0091 Amir_0092 Amir_0092 Amir_0092 99260 100771 + cytochrome bd ubiquinol oxidase subunit I PFAM: cytochrome bd ubiquinol oxidase subunit I~KEGG: bsu:BSU38760 cytochrome bd ubiquinol oxidase (subunit I) gene gene95 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0092 Amir_0093 Amir_0093 Amir_0093 100786 101790 + cytochrome d ubiquinol oxidase%2C subunit II KEGG: glo:Glov_1209 cytochrome d ubiquinol oxidase%2C subunit II~TIGRFAM: cytochrome d ubiquinol oxidase%2C subunit II~PFAM: cytochrome bd ubiquinol oxidase subunit II gene gene96 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0093 Amir_0094 Amir_0094 Amir_0094 102023 103051 - TIR protein SMART: TIR protein~KEGG: vvy:VV1926 hypothetical protein gene gene97 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0094 Amir_0095 Amir_0095 Amir_0095 103158 106223 + ABC transporter%2C CydDC cysteine exporter (CydDC- E) family%2C permease/ATP-binding protein CydD KEGG: bpt:Bpet3362 HlyB/MsbA family ABC transporter~TIGRFAM: ABC transporter%2C CydDC cysteine exporter (CydDC-E) family%2C permease/ATP-binding protein CydD%3B ABC transporter%2C CydDC cysteine exporter (CydDC-E) family%2C permease/ATP-binding protein CydC~PFAM: ABC transporter related%3B ABC transporter transmembrane region~SMART: AAA ATPase gene gene98 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0095 Amir_0096 Amir_0096 Amir_0096 106220 107338 + GAF sensor signal transduction histidine kinase PFAM: ATP-binding region ATPase domain protein%3B histidine kinase dimerization and phosphoacceptor region%3B GAF domain protein~SMART: GAF domain protein%3B ATP-binding region ATPase domain protein~KEGG: pna:Pnap_3765 multi-sensor signal transduction histidine kinase gene gene99 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0096 Amir_0097 Amir_0097 Amir_0097 107555 108184 - two component transcriptional regulator%2C LuxR family PFAM: response regulator receiver%3B regulatory protein LuxR%3B Sigma-70 region 4 type 2~SMART: response regulator receiver%3B regulatory protein LuxR~KEGG: xca:xccb100_3213 two-component system regulatory protein gene gene100 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0097 Amir_0098 Amir_0098 Amir_0098 108245 108727 + GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: bca:BCE_4174 acetyltransferase gene gene101 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0098 Amir_0099 Amir_0099 Amir_0099 108789 109388 - Appr-1-p processing domain protein PFAM: Appr-1-p processing domain protein~KEGG: dal:Dalk_0690 Appr-1-p processing domain protein gene gene102 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0099 Amir_0100 Amir_0100 Amir_0100 109492 110394 + Prephenate dehydratase PFAM: prephenate dehydratase%3B amino acid-binding ACT domain protein~KEGG: ank:AnaeK_2061 prephenate dehydratase gene gene103 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0100 Amir_0101 Amir_0101 Amir_0101 110391 111002 + Phosphoglycerate mutase PFAM: Phosphoglycerate mutase~KEGG: lch:Lcho_3955 phosphoglycerate mutase gene gene104 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0101 Amir_0102 Amir_0102 Amir_0102 111064 111585 - pseudogene gene105 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0102 Amir_0103 Amir_0103 Amir_0103 111597 111792 - pseudogene gene106 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0103 Amir_0104 Amir_0104 Amir_0104 111845 112261 - hypothetical protein gene gene107 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0104 Amir_0105 Amir_0105 Amir_0105 112255 112677 - hypothetical protein gene gene108 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0105 Amir_0106 Amir_0106 Amir_0106 112751 112936 - hypothetical protein gene gene109 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0106 Amir_0107 Amir_0107 Amir_0107 113121 114014 + helix-turn-helix domain protein PFAM: helix-turn-helix domain protein~SMART: helix-turn-helix domain protein gene gene110 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0107 Amir_0108 Amir_0108 Amir_0108 114011 114196 + protein of unknown function DUF397 PFAM: protein of unknown function DUF397 gene gene111 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0108 Amir_0109 Amir_0109 Amir_0109 114247 114795 - Peptidylprolyl isomerase PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type~KEGG: ade:Adeh_1652 peptidylprolyl isomerase gene gene112 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0109 Amir_0110 Amir_0110 Amir_0110 115026 118412 + glycoside hydrolase family 31 PFAM: glycoside hydrolase family 31%3B Carbohydrate binding family 6%3B Ricin B lectin~SMART: cellulose binding type IV%3B Ricin B lectin~KEGG: aba:Acid345_1956 glycoside hydrolase%2C family 31 gene gene113 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0110 Amir_0111 Amir_0111 Amir_0111 118546 120380 + pseudogene gene114 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0111 Amir_0112 Amir_0112 Amir_0112 120442 120792 - protein of unknown function DUF1025 PFAM: protein of unknown function DUF1025~KEGG: eli:ELI_09390 hypothetical protein gene gene115 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0112 Amir_0113 Amir_0113 Amir_0113 120797 121825 - hypothetical protein KEGG: YALI0F05786p gene gene116 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0113 Amir_0114 Amir_0114 Amir_0114 121985 122737 + hypothetical protein KEGG: hypothetical protein gene gene117 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0114 Amir_0115 Amir_0115 Amir_0115 122738 123901 + glutathionylspermidine synthase PFAM: glutathionylspermidine synthase~KEGG: sus:Acid_7141 glutathionylspermidine synthase gene gene118 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0115 Amir_0116 Amir_0116 Amir_0116 123918 124370 + protein of unknown function DUF350 PFAM: protein of unknown function DUF350~KEGG: met:M446_5403 hypothetical protein gene gene119 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0116 Amir_0117 Amir_0117 Amir_0117 124531 125205 - hypothetical protein gene gene120 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0117 Amir_0118 Amir_0118 Amir_0118 125363 126613 + seryl-tRNA synthetase KEGG: bcz:BCZK0013 seryl-tRNA synthetase~TIGRFAM: seryl-tRNA synthetase~PFAM: tRNA synthetase class II (G H P and S)%3B Seryl- tRNA synthetase%2C class IIa-like gene gene121 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0118 Amir_0119 Amir_0119 Amir_0119 127550 128737 - FAD dependent oxidoreductase PFAM: FAD dependent oxidoreductase%3B HI0933 family protein~KEGG: sus:Acid_5855 FAD dependent oxidoreductase gene gene122 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0119 Amir_0120 Amir_0120 Amir_0120 128739 129671 - Luciferase-like monooxygenase PFAM: Luciferase-like monooxygenase~KEGG: rpb:RPB_4411 luciferase-like gene gene123 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0120 Amir_0121 Amir_0121 Amir_0121 129678 130499 + Cof-like hydrolase TIGRFAM: Cof-like hydrolase%3B HAD-superfamily hydrolase%2C subfamily IIB~PFAM: Haloacid dehalogenase domain protein hydrolase type 3%3B Haloacid dehalogenase domain protein hydrolase%3B sucrose-6F-phosphate phosphohydrolase~KEGG: mno:Mnod_7133 Cof-like hydrolase gene gene124 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0121 Amir_0122 Amir_0122 Amir_0122 130616 132532 + hypothetical protein KEGG: sml:Smlt0624 putative transmembrane protein gene gene125 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0122 Amir_0123 Amir_0123 Amir_0123 132542 133594 + Ribonuclease III PFAM: glycosyl transferase family 2~KEGG: rme:Rmet_6128 glycosyl transferase%2C family 2 gene gene126 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0123 Amir_0124 Amir_0124 Amir_0124 133597 134106 + GtrA family protein PFAM: GtrA family protein~KEGG: GtrA family protein gene gene127 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0124 Amir_0125 Amir_0125 Amir_0125 134133 135434 + acyltransferase 3 PFAM: acyltransferase 3~KEGG: acr:Acry_1134 acyltransferase 3 gene gene128 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0125 Amir_0126 Amir_0126 Amir_0126 135536 137167 + glycosyl transferase group 1 PFAM: glycosyl transferase group 1~KEGG: pae:PA1391 glycosyl transferase gene gene129 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0126 Amir_0127 Amir_0127 Amir_0127 137164 138063 + glycosyl transferase family 2 PFAM: glycosyl transferase family 2~KEGG: bcj:BCAL3234 glycosyltransferase gene gene130 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0127 Amir_0128 Amir_0128 Amir_0128 138200 139384 + UDP-galactopyranose mutase KEGG: gox:GOX1488 UDP-galactopyranose mutase~TIGRFAM: UDP-galactopyranose mutase~PFAM: UDP-galactopyranose mutase-like gene gene131 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0128 Amir_0129 Amir_0129 Amir_0129 139453 140256 - hypothetical protein KEGG: pna:Pnap_3593 hypothetical protein gene gene132 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0129 Amir_0130 Amir_0130 Amir_0130 140289 141086 - hypothetical protein KEGG: dac:Daci_5514 hypothetical protein gene gene133 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0130 Amir_0131 Amir_0131 Amir_0131 141148 141948 - hypothetical protein KEGG: jan:Jann_1080 metallophosphoesterase gene gene134 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0131 Amir_0132 Amir_0132 Amir_0132 142456 143352 - glycosyl transferase family 2 PFAM: glycosyl transferase family 2~KEGG: apl:APL_1469 glycosyl transferase family protein gene gene135 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0132 Amir_0133 Amir_0133 Amir_0133 143356 144171 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: cbc:CbuK_1550 polysaccharide export ATP- binding protein gene gene136 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0133 Amir_0134 Amir_0134 Amir_0134 144188 145099 - ABC-2 type transporter PFAM: ABC-2 type transporter~KEGG: tbd:Tbd_1878 ABC transporter permease protein gene gene137 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0134 Amir_0135 Amir_0135 Amir_0135 145369 145917 - hypothetical protein gene gene138 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0135 Amir_0136 Amir_0136 Amir_0136 146032 147231 + cysteine desulfurase family protein TIGRFAM: cysteine desulfurase family protein~PFAM: aminotransferase class V~KEGG: mlo:mlr0102 aminotransferase gene gene139 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0136 Amir_0137 Amir_0137 Amir_0137 147357 148010 + conserved hypothetical protein KEGG: mes:Meso_0486 hypothetical protein gene gene140 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0137 Amir_0138 Amir_0138 Amir_0138 148245 149723 - conserved hypothetical protein KEGG: scl:sce7164 hypothetical protein gene gene141 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0138 Amir_0139 Amir_0139 Amir_0139 149847 150821 - NAD(P)H quinone oxidoreductase%2C PIG3 family TIGRFAM: NAD(P)H quinone oxidoreductase%2C PIG3 family~PFAM: Alcohol dehydrogenase zinc-binding domain protein%3B Alcohol dehydrogenase GroES domain protein~KEGG: hypothetical protein gene gene142 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0139 Amir_0140 Amir_0140 Amir_0140 150866 151498 + GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: atc:AGR_C_5049 hypothetical protein gene gene143 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0140 Amir_0141 Amir_0141 Amir_0141 151575 153095 + Aminopeptidase Y PFAM: peptidase M28%3B protease-associated PA domain protein~KEGG: pag:PLES_21241 putative aminopeptidase gene gene144 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0141 Amir_0142 Amir_0142 Amir_0142 153173 154078 - protein of unknown function zinc metallopeptidase putative PFAM: protein of unknown function zinc metallopeptidase putative~KEGG: rfr:Rfer_2725 protein of unknown function%2C zinc metallopeptidase putative gene gene145 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0142 Amir_0143 Amir_0143 Amir_0143 154537 156264 - 5'-Nucleotidase domain protein PFAM: 5'-Nucleotidase domain protein%3B metallophosphoesterase~KEGG: scl:sce7039 putative 5'-nucleotidase family protein gene gene146 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0143 Amir_0144 Amir_0144 Amir_0144 156424 156891 + transcriptional regulator%2C MarR family PFAM: regulatory protein MarR~SMART: regulatory protein MarR~KEGG: acp:A2cp1_4259 transcriptional regulator%2C MarR family gene gene147 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0144 Amir_0145 Amir_0145 Amir_0145 157221 157970 + protein of unknown function DUF81 PFAM: protein of unknown function DUF81~KEGG: sfu:Sfum_1521 protein of unknown function DUF81 gene gene149 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0145 Amir_0146 Amir_0146 Amir_0146 158047 159114 - histidinol-phosphate aminotransferase TIGRFAM: histidinol-phosphate aminotransferase~PFAM: aminotransferase class I and II~KEGG: scl:sce8915 histidinol-phosphate transaminase gene gene150 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0146 Amir_0147 Amir_0147 Amir_0147 159236 159919 + dienelactone hydrolase PFAM: dienelactone hydrolase~KEGG: cvi:CV_3204 carboxymethylenebutenolidase gene gene151 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0147 Amir_0148 Amir_0148 Amir_0148 159963 160340 - hypothetical protein KEGG: GK21229 gene product from transcript GK21229- RA gene gene152 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0148 Amir_0149 Amir_0149 Amir_0149 160367 161743 + hypothetical protein KEGG: GH10507 gene product from transcript GH10507- RA gene gene153 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0149 Amir_0150 Amir_0150 Amir_0150 161743 163089 + hypothetical protein KEGG: reu:Reut_B5390 glycin-rich signal peptide protein gene gene154 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0150 Amir_0151 Amir_0151 Amir_0151 163086 163844 + hypothetical protein gene gene155 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0151 Amir_0152 Amir_0152 Amir_0152 163955 165910 + acetoacetyl-CoA synthase TIGRFAM: acetoacetyl-CoA synthase~PFAM: AMP-dependent synthetase and ligase~KEGG: sil:SPO1959 acetoacetyl-CoA synthetase gene gene156 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0152 Amir_0153 Amir_0153 Amir_0153 166576 168750 - hypothetical protein KEGG: SAMD1%3B sterile alpha motif domain containing 1 gene gene159 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0153 Amir_0154 Amir_0154 Amir_0154 168872 169687 - beta-lactamase PFAM: beta-lactamase~KEGG: sml:Smlt3132 putative beta-lactamase gene gene160 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0154 Amir_0155 Amir_0155 Amir_0155 169787 171295 + LPXTG-motif cell wall anchor domain protein TIGRFAM: LPXTG-motif cell wall anchor domain protein~KEGG: bur:Bcep18194_A5663 DNA translocase FtsK gene gene161 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0155 Amir_0156 Amir_0156 Amir_0156 171267 172106 - NAD-dependent epimerase/dehydratase PFAM: NAD-dependent epimerase/dehydratase%3B Male sterility domain%3B 3-beta hydroxysteroid dehydrogenase/isomerase%3B short-chain dehydrogenase/reductase SDR%3B dTDP-4-dehydrorhamnose reductase~KEGG: hha:Hhal_0769 UDP-glucose 4-epimerase gene gene162 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0156 Amir_0157 Amir_0157 Amir_0157 172215 172442 + hypothetical protein gene gene163 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0157 Amir_0158 Amir_0158 Amir_0158 172593 174020 + hypothetical protein gene gene164 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0158 Amir_0159 Amir_0159 Amir_0159 174010 174810 - hypothetical protein KEGG: scl:sce4085 hypothetical protein gene gene165 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0159 Amir_0160 Amir_0160 Amir_0160 174893 176107 + DNA (cytosine-5-)-methyltransferase PFAM: C-5 cytosine-specific DNA methylase~KEGG: nmc:NMC1992 modification methylase (cytosine- specific DNA methylase) gene gene166 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0160 Amir_0161 Amir_0161 Amir_0161 176495 177745 + LPXTG-motif cell wall anchor domain protein TIGRFAM: LPXTG-motif cell wall anchor domain protein~KEGG: ADR019Cp%3B K01066 esterase / lipase gene gene167 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0161 Amir_0162 Amir_0162 Amir_0162 177884 178057 + hypothetical protein gene gene168 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0162 Amir_0163 Amir_0163 Amir_0163 178054 178677 + protein of unknown function DUF1089 PFAM: protein of unknown function DUF1089~KEGG: sme:SMc03980 hypothetical protein gene gene169 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0163 Amir_0164 Amir_0164 Amir_0164 178764 179948 - acetyl-CoA acetyltransferase TIGRFAM: acetyl-CoA acetyltransferase~PFAM: Thiolase~KEGG: gbm:Gbem_1434 acetyl-CoA acetyltransferase gene gene170 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0164 Amir_0165 Amir_0165 Amir_0165 179961 181772 - hypothetical protein KEGG: CG32656 gene gene171 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0165 Amir_0166 Amir_0166 Amir_0166 181830 182186 - hypothetical protein gene gene172 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0166 Amir_0167 Amir_0167 Amir_0167 182183 183073 - PE-PGRS family protein KEGG: ade:Adeh_1681 PE-PGRS family protein gene gene173 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0167 Amir_0168 Amir_0168 Amir_0168 183317 184273 - Prephenate dehydrogenase PFAM: Prephenate dehydrogenase~KEGG: gsu:GSU2607 prephenate dehydrogenase gene gene174 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0168 Amir_0169 Amir_0169 Amir_0169 184371 185606 - amidohydrolase KEGG: sal:Sala_2314 peptidase M20D%2C amidohydrolase~TIGRFAM: amidohydrolase~PFAM: peptidase M20%3B peptidase dimerization domain protein gene gene175 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0169 Amir_0170 Amir_0170 Amir_0170 185647 186177 + hypothetical protein gene gene176 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0170 Amir_0171 Amir_0171 Amir_0171 186174 186656 + CMP/dCMP deaminase zinc-binding PFAM: CMP/dCMP deaminase zinc-binding~KEGG: gur:Gura_0055 CMP/dCMP deaminase%2C zinc- binding gene gene177 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0171 Amir_0172 Amir_0172 Amir_0172 186876 188189 - integrase family protein PFAM: integrase family protein~KEGG: sus:Acid_5994 phage integrase family protein gene gene179 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0172 Amir_0173 Amir_0173 Amir_0173 188197 188499 - DNA binding domain protein%2C excisionase family TIGRFAM: DNA binding domain protein%2C excisionase family gene gene180 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0173 Amir_0174 Amir_0174 Amir_0174 188496 189647 - conserved hypothetical protein KEGG: rso:RSc2483 hypothetical protein gene gene181 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0174 Amir_0175 Amir_0175 Amir_0175 189644 190216 - hypothetical protein gene gene182 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0175 Amir_0176 Amir_0176 Amir_0176 190299 190574 - hypothetical protein gene gene183 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0176 Amir_0177 Amir_0177 Amir_0177 190727 192922 - cell divisionFtsK/SpoIIIE PFAM: cell divisionFtsK/SpoIIIE~KEGG: bac:BamMC406_0006 cell divisionFtsK/SpoIIIE gene gene184 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0177 Amir_0178 Amir_0178 Amir_0178 192919 193884 - hypothetical protein KEGG: bmv:BMASAVP1_A1237 hypothetical protein gene gene185 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0178 Amir_0179 Amir_0179 Amir_0179 193881 193976 - hypothetical protein gene gene186 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0179 Amir_0180 Amir_0180 Amir_0180 194069 194224 - hypothetical protein gene gene187 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0180 Amir_0181 Amir_0181 Amir_0181 194253 194564 - hypothetical protein gene gene188 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0181 Amir_0182 Amir_0182 Amir_0182 194728 195081 + transcriptional regulator%2C XRE family SMART: helix-turn-helix domain protein gene gene189 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0182 Amir_0183 Amir_0183 Amir_0183 195181 196023 - transposase IS4 family protein PFAM: transposase IS4 family protein~KEGG: similar to F57G4.9 gene gene190 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0183 Amir_0184 Amir_0184 Amir_0184 196208 196987 + aminotransferase class IV PFAM: aminotransferase class IV~KEGG: smt:Smal_1152 hypothetical protein gene gene191 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0184 Amir_0185 Amir_0185 Amir_0185 197023 197958 + transcriptional regulator%2C XRE family PFAM: protein of unknown function DUF323~SMART: helix-turn-helix domain protein~KEGG: scl:sce5487 protein kinase gene gene192 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0185 Amir_0186 Amir_0186 Amir_0186 198068 198250 - hypothetical protein gene gene193 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0186 Amir_0187 Amir_0187 Amir_0187 198251 198898 - hypothetical protein KEGG: rsq:Rsph17025_0912 hypothetical protein gene gene194 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0187 Amir_0188 Amir_0188 Amir_0188 198895 199368 - conserved hypothetical protein KEGG: bxe:Bxe_C1257 hypothetical protein gene gene195 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0188 Amir_0189 Amir_0189 Amir_0189 199368 200309 - peptidase C14 caspase catalytic subunit p20 PFAM: peptidase C14 caspase catalytic subunit p20~KEGG: bcr:BCAH187_E0055 peptidase C14 caspase catalytic subunit P20 gene gene196 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0189 Amir_0190 Amir_0190 Amir_0190 200314 200691 - Domain of unknown function DUF1863 PFAM: Domain of unknown function DUF1863~KEGG: sbm:Shew185_4383 hypothetical protein gene gene197 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0190 Amir_0191 Amir_0191 Amir_0191 201557 202771 - protein-L-isoaspartate(D-aspartate)O-methyltrans ferase PFAM: protein-L-isoaspartate(D-aspartate) O- methyltransferase%3B Methyltransferase type 11~KEGG: bmj:BMULJ_02352 protein-L-isoaspartate (D- aspartate) O-methyltransferase gene gene198 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0191 Amir_0192 Amir_0192 Amir_0192 202768 203733 - conserved hypothetical protein KEGG: scl:sce7176 hypothetical protein gene gene199 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0192 Amir_0193 Amir_0193 Amir_0193 203733 204038 - hypothetical protein gene gene200 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0193 Amir_0194 Amir_0194 Amir_0194 204230 205435 + transcriptional regulator%2C XRE family PFAM: helix-turn-helix domain protein%3B Tetratricopeptide TPR_4~SMART: helix-turn-helix domain protein~KEGG: eca:ECA3401 putative phage regulatory protein gene gene201 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0194 Amir_0195 Amir_0195 Amir_0195 206393 208858 + Endonuclease/exonuclease/phosphatase PFAM: Endonuclease/exonuclease/phosphatase~KEGG: scl:sce0688 endonuclease/exonuclease/phosphatase family protein gene gene202 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0195 Amir_0196 Amir_0196 Amir_0196 208921 209328 - Endoribonuclease L-PSP PFAM: Endoribonuclease L-PSP~KEGG: scl:sce5646 hypothetical protein gene gene203 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0196 Amir_0197 Amir_0197 Amir_0197 209402 210040 + putative transcriptional regulator%2C TetR family KEGG: mlo:mlr3102 transcriptional regulator gene gene204 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0197 Amir_0198 Amir_0198 Amir_0198 210404 212551 - methyl-accepting chemotaxis sensory transducer PFAM: chemotaxis sensory transducer%3B histidine kinase HAMP region domain protein~SMART: chemotaxis sensory transducer%3B histidine kinase HAMP region domain protein~KEGG: pca:Pcar_1336 putative methyl-accepting chemotaxis protein (MCP) gene gene206 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0198 Amir_0199 Amir_0199 Amir_0199 212696 214294 - methyl-accepting chemotaxis sensory transducer PFAM: chemotaxis sensory transducer%3B histidine kinase HAMP region domain protein~SMART: chemotaxis sensory transducer%3B histidine kinase HAMP region domain protein~KEGG: aba:Acid345_1672 methyl-accepting chemotaxis sensory transducer gene gene207 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0199 Amir_0200 Amir_0200 Amir_0200 214464 215432 + periplasmic binding protein PFAM: periplasmic binding protein~KEGG: atc:AGR_pAT_447 DtxR/iron regulated lipoprotein precursor gene gene208 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0200 Amir_0201 Amir_0201 Amir_0201 215613 217754 + DNA polymerase III%2C subunits gamma and tau KEGG: gbm:Gbem_0212 DNA polymerase III%2C subunits gamma and tau~TIGRFAM: DNA polymerase III%2C subunits gamma and tau~PFAM: AAA ATPase central domain protein~SMART: AAA ATPase gene gene210 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0201 Amir_0202 Amir_0202 Amir_0202 217802 218149 + conserved hypothetical protein PFAM: conserved hypothetical protein~KEGG: gme:Gmet_3421 hypothetical protein gene gene211 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0202 Amir_0203 Amir_0203 Amir_0203 218149 218742 + recombination protein RecR KEGG: mxa:MXAN_1930 recombination protein RecR~TIGRFAM: recombination protein RecR~PFAM: TOPRIM domain protein%3B Zinc finger C4-type%2C RecR~SMART: Toprim sub domain protein gene gene212 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0203 Amir_0204 Amir_0204 Amir_0204 218756 219226 + hypothetical protein KEGG: bcz:BCZK2509 hypothetical protein gene gene213 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0204 Amir_0205 Amir_0205 Amir_0205 225081 228347 - transcriptional regulator%2C SARP family PFAM: transcriptional activator domain%3B TPR repeat- containing protein%3B Tetratricopeptide TPR_4%3B NB-ARC domain protein%3B transcriptional regulator domain protein%3B Tetratricopeptide TPR_2 repeat protein~SMART: Tetratricopeptide domain protein~KEGG: scl:sce5225 protein kinase gene gene218 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0205 Amir_0206 Amir_0206 Amir_0206 228577 230262 + extracellular solute-binding protein family 5 PFAM: extracellular solute-binding protein family 5~KEGG: hap:HAPS_0936 periplasmic dipeptide transport protein DppA gene gene219 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0206 Amir_0207 Amir_0207 Amir_0207 230308 231318 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: pde:Pden_1670 binding-protein-dependent transport systems inner membrane component gene gene220 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0207 Amir_0208 Amir_0208 Amir_0208 231325 232257 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: bha:BH3642 dipeptide ABC transporter (permease) gene gene221 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0208 Amir_0209 Amir_0209 Amir_0209 232263 233258 + oligopeptide/dipeptide ABC transporter%2C ATPase subunit KEGG: bja:bll2870 ABC transporter ATP-binding protein~TIGRFAM: oligopeptide/dipeptide ABC transporter%2C ATPase subunit~PFAM: ABC transporter related%3B Oligopeptide/dipeptide ABC transporter domain protein~SMART: AAA ATPase gene gene222 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0209 Amir_0210 Amir_0210 Amir_0210 233255 234397 + oligopeptide/dipeptide ABC transporter%2C ATPase subunit KEGG: bja:blr1357 peptide ABC transporter ATP- binding protein~TIGRFAM: oligopeptide/dipeptide ABC transporter%2C ATPase subunit~PFAM: ABC transporter related%3B Oligopeptide/dipeptide ABC transporter domain protein~SMART: AAA ATPase gene gene223 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0210 Amir_0211 Amir_0211 Amir_0211 234560 236698 + N-6 DNA methylase PFAM: N-6 DNA methylase~KEGG: xom:XOO_3262 type I restriction system adenine methylase gene gene224 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0211 Amir_0212 Amir_0212 Amir_0212 237187 237762 + putative membrane-associated protein KEGG: pol:Bpro_3150 DedA gene gene225 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0212 Amir_0213 Amir_0213 Amir_0213 237857 239653 - 2-isopropylmalate synthase KEGG: csa:Csal_2535 2-isopropylmalate synthase~TIGRFAM: 2-isopropylmalate synthase~PFAM: pyruvate carboxyltransferase%3B LeuA allosteric (dimerisation) domain gene gene226 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0213 Amir_0214 Amir_0214 Amir_0214 239881 240186 + hypothetical protein gene gene227 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0214 Amir_0215 Amir_0215 Amir_0215 240214 240846 - nitroreductase PFAM: nitroreductase~KEGG: ank:AnaeK_1659 nitroreductase gene gene228 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0215 Amir_0216 Amir_0216 Amir_0216 240873 242096 - hypothetical protein KEGG: mxa:MXAN_5370 putative lipoprotein gene gene229 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0216 Amir_0217 Amir_0217 Amir_0217 242173 243438 + aspartate kinase KEGG: tgr:Tgr7_1290 aspartate kinase~TIGRFAM: aspartate kinase~PFAM: aspartate/glutamate/uridylate kinase%3B amino acid-binding ACT domain protein gene gene230 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0217 Amir_0218 Amir_0218 Amir_0218 243435 244502 + aspartate-semialdehyde dehydrogenase KEGG: bcb:BCB4264_A3899 aspartate-semialdehyde dehydrogenase~TIGRFAM: aspartate-semialdehyde dehydrogenase~PFAM: Semialdehyde dehydrogenase dimerization region%3B Semialdehyde dehydrogenase NAD - binding gene gene231 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0218 Amir_0219 Amir_0219 Amir_0219 244506 245936 + carbohydrate kinase FGGY PFAM: carbohydrate kinase FGGY~KEGG: bcb:BCB4264_A2253 gluconate kinase gene gene232 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0219 Amir_0220 Amir_0220 Amir_0220 246130 246333 + cold-shock DNA-binding domain protein PFAM: Cold-shock protein DNA-binding~SMART: Cold shock protein~KEGG: vsa:VSAL_II0614 cold shock-like protein gene gene233 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0220 Amir_0221 Amir_0221 Amir_0221 246436 247614 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: ppg:PputGB1_3286 major facilitator transporter gene gene234 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0221 Amir_0222 Amir_0222 Amir_0222 247767 249221 + Catalase PFAM: Catalase domain protein~KEGG: eta:ETA_17240 catalase gene gene235 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0222 Amir_0223 Amir_0223 Amir_0223 249410 249832 + OsmC family protein PFAM: OsmC family protein~KEGG: bpy:Bphyt_6798 OsmC family protein gene gene236 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0223 Amir_0224 Amir_0224 Amir_0224 249865 250341 + Ferritin Dps family protein PFAM: Ferritin Dps family protein~KEGG: mpo:Mpop_0322 ferritin Dps family protein gene gene237 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0224 Amir_0225 Amir_0225 Amir_0225 250415 250981 - NADPH-dependent FMN reductase PFAM: NADPH-dependent FMN reductase~KEGG: bpl:BURPS1106A_A1934 NADPH-dependent FMN reductase gene gene238 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0225 Amir_0226 Amir_0226 Amir_0226 251061 252113 + Alpha/beta hydrolase fold-3 domain protein PFAM: Alpha/beta hydrolase fold-3 domain protein~KEGG: rce:RC1_2418 lipase gene gene239 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0226 Amir_0227 Amir_0227 Amir_0227 252213 254027 - peptidase S9 prolyl oligopeptidase active site domain protein PFAM: peptidase S9 prolyl oligopeptidase active site domain protein%3B peptidase S15~KEGG: pzu:PHZ_c2763 dipeptidyl aminopeptidase/acylaminoacyl-peptidase gene gene240 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0227 Amir_0228 Amir_0228 Amir_0228 254024 254854 - Methyltransferase type 11 PFAM: Methyltransferase type 11%3B Cyclopropane-fatty- acyl-phospholipid synthase%3B Methyltransferase type 12~KEGG: hha:Hhal_0984 methyltransferase type 11 gene gene241 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0228 Amir_0229 Amir_0229 Amir_0229 255115 255591 - synaptopodin 2-like protein KEGG: SYNPO2L%3B synaptopodin 2-like gene gene242 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0229 Amir_0230 Amir_0230 Amir_0230 255737 256330 - pseudogene gene243 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0230 Amir_0231 Amir_0231 Amir_0231 256337 256627 - pseudogene gene244 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0231 Amir_0232 Amir_0232 Amir_0232 256654 257529 - hypothetical protein gene gene245 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0232 Amir_0233 Amir_0233 Amir_0233 258162 259121 - metallophosphoesterase PFAM: metallophosphoesterase~KEGG: hch:HCH_04892 phosphohydrolase gene gene247 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0233 Amir_0234 Amir_0234 Amir_0234 259185 259652 + GatB/YqeY domain protein KEGG: mxa:MXAN_5202 GatB/YqeY domain protein gene gene248 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0234 Amir_0235 Amir_0235 Amir_0235 259758 262250 - glycosyl transferase family 51 PFAM: glycosyl transferase family 51%3B PASTA domain containing protein%3B penicillin-binding protein transpeptidase~SMART: PASTA domain containing protein~KEGG: azc:AZC_0337 penicillin-binding protein 1A gene gene249 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0235 Amir_0236 Amir_0236 Amir_0236 262504 262797 + transcription factor WhiB PFAM: transcription factor WhiB gene gene250 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0236 Amir_0237 Amir_0237 Amir_0237 262823 263947 - Anion-transporting ATPase PFAM: Anion-transporting ATPase~KEGG: acp:A2cp1_0984 adventurous gliding motility protein R gene gene251 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0237 Amir_0238 Amir_0238 Amir_0238 263944 264936 - Anion-transporting ATPase PFAM: Anion-transporting ATPase~KEGG: afw:Anae109_0972 chromosome partitioning-like ATPase gene gene252 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0238 Amir_0239 Amir_0239 Amir_0239 265300 265569 - hypothetical protein gene gene253 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0239 Amir_0240 Amir_0240 Amir_0240 266128 266283 + hypothetical protein gene gene254 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0240 Amir_0241 Amir_0241 Amir_0241 266280 266738 + Endoribonuclease L-PSP PFAM: Endoribonuclease L-PSP~KEGG: rce:RC1_1921 endoribonuclease L-PSP%2C putative gene gene255 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0241 Amir_0242 Amir_0242 Amir_0242 266740 267351 + hypothetical protein gene gene256 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0242 Amir_0243 Amir_0243 Amir_0243 267390 268634 + hypothetical protein KEGG: predicted protein gene gene257 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0243 Amir_0244 Amir_0244 Amir_0244 268651 269457 - conserved hypothetical protein KEGG: ade:Adeh_3797 hypothetical protein gene gene258 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0244 Amir_0245 Amir_0245 Amir_0245 269454 270344 - oxidoreductase domain protein PFAM: oxidoreductase domain protein~KEGG: rec:RHECIAT_PC0000780 putative oxidoreductase protein gene gene259 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0245 Amir_0246 Amir_0246 Amir_0246 270356 270715 - hypothetical protein gene gene260 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0246 Amir_0247 Amir_0247 Amir_0247 270739 271578 + NUDIX hydrolase PFAM: NUDIX hydrolase~KEGG: rpd:RPD_3111 NUDIX hydrolase gene gene261 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0247 Amir_0248 Amir_0248 Amir_0248 271575 272375 + beta-lactamase domain protein PFAM: beta-lactamase domain protein~KEGG: aav:Aave_0793 beta-lactamase domain protein gene gene262 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0248 Amir_0249 Amir_0249 Amir_0249 272493 273131 + hypothetical protein KEGG: mlo:mlr3017 5'-nucleotidase gene gene263 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0249 Amir_0250 Amir_0250 Amir_0250 273148 273483 - hypothetical protein gene gene264 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0250 Amir_0251 Amir_0251 Amir_0251 273605 274702 - DNA polymerase III%2C beta subunit KEGG: sus:Acid_0002 DNA polymerase III%2C beta subunit~TIGRFAM: DNA polymerase III%2C beta subunit~PFAM: DNA polymerase III beta chain~SMART: DNA polymerase III beta chain gene gene265 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0251 Amir_0252 Amir_0252 Amir_0252 274744 276042 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: sml:Smlt0548 putative MFS family transporter gene gene266 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0252 Amir_0253 Amir_0253 Amir_0253 276747 277421 - transcriptional regulator%2C Crp/Fnr family PFAM: cyclic nucleotide-binding%3B regulatory protein Crp~SMART: cyclic nucleotide-binding%3B regulatory protein Crp~KEGG: bbt:BBta_5745 transcriptional regulator gene gene267 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0253 Amir_0254 Amir_0254 Amir_0254 277624 277872 - hypothetical protein gene gene268 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0254 Amir_0255 Amir_0255 Amir_0255 278144 278917 + endonuclease III KEGG: pca:Pcar_0009 endonuclease III~TIGRFAM: endonuclease III~PFAM: HhH-GPD family protein%3B helix-hairpin-helix motif~SMART: HhH-GPD family protein%3B iron-sulfur cluster loop gene gene269 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0255 Amir_0256 Amir_0256 Amir_0256 278914 279594 + alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen%3B Redoxin domain protein~KEGG: xop:PXO_04554 thioredoxin gene gene270 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0256 Amir_0257 Amir_0257 Amir_0257 279591 280331 + NUDIX hydrolase PFAM: NUDIX hydrolase~KEGG: mch:Mchl_1739 NUDIX hydrolase gene gene271 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0257 Amir_0258 Amir_0258 Amir_0258 280353 281540 + Colicin V production protein PFAM: Colicin V production protein%3B peptidase S1 and S6 chymotrypsin/Hap~KEGG: hypothetical protein gene gene272 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0258 Amir_0259 Amir_0259 Amir_0259 281588 282514 - alpha/beta hydrolase fold protein PFAM: alpha/beta hydrolase fold~KEGG: acp:A2cp1_0551 alpha/beta hydrolase fold protein gene gene273 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0259 Amir_0260 Amir_0260 Amir_0260 282523 282990 - protein of unknown function DUF1469 PFAM: protein of unknown function DUF1469~KEGG: mpo:Mpop_1689 protein of unknown function DUF1469 gene gene274 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0260 Amir_0261 Amir_0261 Amir_0261 283062 284234 - Na+/H+ antiporter NhaA TIGRFAM: Na+/H+ antiporter NhaA~PFAM: Na+/H+ antiporter NhaA%3B sodium/hydrogen exchanger~KEGG: mlo:mlr5309 Na+/H+ antiporter gene gene275 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0261 Amir_0262 Amir_0262 Amir_0262 284370 286355 - acetate/CoA ligase TIGRFAM: acetate/CoA ligase~PFAM: AMP-dependent synthetase and ligase~KEGG: aba:Acid345_3520 acetyl-coenzyme A synthetase gene gene276 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0262 Amir_0263 Amir_0263 Amir_0263 286579 287160 - GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: aav:Aave_3953 GCN5-related N- acetyltransferase gene gene277 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0263 Amir_0264 Amir_0264 Amir_0264 287252 287974 + hypothetical protein KEGG: mxa:MXAN_6904 hypothetical protein gene gene278 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0264 Amir_0265 Amir_0265 Amir_0265 287971 289092 - kynureninase TIGRFAM: kynureninase~PFAM: aminotransferase class V~KEGG: pde:Pden_2620 kynureninase gene gene279 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0265 Amir_0266 Amir_0266 Amir_0266 289089 289910 - tryptophan 23-dioxygenase PFAM: tryptophan 23-dioxygenase~KEGG: reh:H16_B1418 tryptophan 2%2C3-dioxygenase gene gene280 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0266 Amir_0267 Amir_0267 Amir_0267 290017 290466 + transcriptional regulator%2C AsnC family PFAM: regulatory protein AsnC/Lrp family~SMART: regulatory protein AsnC/Lrp family~KEGG: bam:Bamb_3888 AsnC family transcriptional regulator gene gene281 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0267 Amir_0268 Amir_0268 Amir_0268 290435 291361 - glucokinase regulatory-like protein TIGRFAM: glucokinase regulatory-like protein~KEGG: spe:Spro_3661 N-acetylmuramic acid-6- phosphate etherase gene gene282 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0268 Amir_0269 Amir_0269 Amir_0269 291358 292272 - transcriptional regulator%2C RpiR family PFAM: sugar isomerase (SIS)%3B helix-turn-helix protein RpiR~KEGG: reh:H16_B1066 transcriptional regulator gene gene283 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0269 Amir_0270 Amir_0270 Amir_0270 292383 294536 - beta-lactamase PFAM: beta-lactamase~KEGG: beta-lactamase gene gene284 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0270 Amir_0271 Amir_0271 Amir_0271 294549 295880 - conserved hypothetical protein PFAM: conserved hypothetical protein~KEGG: hypothetical protein gene gene285 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0271 Amir_0272 Amir_0272 Amir_0272 295935 296138 - hypothetical protein KEGG: similar to mucin 17 gene gene286 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0272 Amir_0273 Amir_0273 Amir_0273 296355 298097 - glycoside hydrolase family 3 domain protein PFAM: glycoside hydrolase family 3 domain protein~KEGG: bha:BH0675 beta-hexosamidase A precursor gene gene287 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0273 Amir_0274 Amir_0274 Amir_0274 298682 299494 - HAD-superfamily subfamily IB hydrolase%2C TIGR01490 TIGRFAM: HAD-superfamily subfamily IB hydrolase%2C TIGR01490%3B HAD-superfamily hydrolase%2C subfamily IB (PSPase- like)~KEGG: pap:PSPA7_0428 hypothetical protein gene gene288 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0274 Amir_0275 Amir_0275 Amir_0275 299900 301015 + hypothetical protein KEGG: ank:AnaeK_2914 Flp pilus assembly protein ATPase CpaE-like protein gene gene289 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0275 Amir_0276 Amir_0276 Amir_0276 301321 302439 + type II secretion system protein E PFAM: type II secretion system protein E~KEGG: bav:BAV2285 pilus assembly protein gene gene290 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0276 Amir_0277 Amir_0277 Amir_0277 302579 303334 + type II secretion system protein PFAM: type II secretion system protein~KEGG: acp:A2cp1_3010 type II secretion system protein gene gene291 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0277 Amir_0278 Amir_0278 Amir_0278 303331 303888 + type II secretion system protein PFAM: type II secretion system protein~KEGG: Hcn2%3B hyperpolarization activated cyclic nucleotide-gated potassium channel 2%3B K04955 hyperpolarization activated cyclic nucleotide-gated potassium channel 2 gene gene292 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0278 Amir_0279 Amir_0279 Amir_0279 303910 304065 + hypothetical protein gene gene293 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0279 Amir_0280 Amir_0280 Amir_0280 304062 304478 + hypothetical protein gene gene294 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0280 Amir_0281 Amir_0281 Amir_0281 304605 304934 + hypothetical protein KEGG: nwi:Nwi_2535 hypothetical protein gene gene295 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0281 Amir_0282 Amir_0282 Amir_0282 305305 305910 + Bifunctional DNA primase/polymerase PFAM: Bifunctional DNA primase/polymerase gene gene296 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0282 Amir_0283 Amir_0283 Amir_0283 306276 308699 - DEAD/DEAH box helicase domain protein PFAM: DEAD/DEAH box helicase domain protein%3B helicase domain protein~SMART: DEAD-like helicase%3B helicase domain protein~KEGG: dvu:DVU0256 DEAD-box ATP dependent DNA helicase gene gene297 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0283 Amir_0284 Amir_0284 Amir_0284 308935 311295 + V-type H(+)-translocating pyrophosphatase KEGG: xcb:XC_0853 membrane-bound proton- translocating pyrophosphatase~TIGRFAM: V-type H(+)-translocating pyrophosphatase~PFAM: Inorganic H pyrophosphatase gene gene298 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0284 Amir_0285 Amir_0285 Amir_0285 311416 312054 + hypothetical protein KEGG: hypothetical protein gene gene299 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0285 Amir_0286 Amir_0286 Amir_0286 312083 312202 + hypothetical protein gene gene300 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0286 Amir_0287 Amir_0287 Amir_0287 312321 312962 + hypothetical protein KEGG: bac:BamMC406_1732 peptidase M23 gene gene301 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0287 Amir_0288 Amir_0288 Amir_0288 313088 313771 + hypothetical protein KEGG: YALI0D24365p gene gene302 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0288 Amir_0289 Amir_0289 Amir_0289 313913 314566 + hypothetical protein KEGG: mucin-associated surface protein (MASP) gene gene303 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0289 Amir_0290 Amir_0290 Amir_0290 314696 315328 + hypothetical protein KEGG: swi:Swit_0780 branched-chain alpha-keto acid dehydrogenase E2 component gene gene304 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0290 Amir_0291 Amir_0291 Amir_0291 315457 318228 + DNA topoisomerase I KEGG: bba:Bd0964 DNA topoisomerase I~TIGRFAM: DNA topoisomerase I~PFAM: DNA topoisomerase type IA central domain protein%3B TOPRIM domain protein~SMART: DNA topoisomerase I DNA-binding%3B DNA topoisomerase I ATP-binding%3B Toprim sub domain protein gene gene305 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0291 Amir_0292 Amir_0292 Amir_0292 318252 318821 + hypothetical protein KEGG: hypothetical protein gene gene306 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0292 Amir_0293 Amir_0293 Amir_0293 318901 321033 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1%3B thymidylate kinase~KEGG: eli:ELI_06215 thymidylate kinase gene gene307 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0293 Amir_0294 Amir_0294 Amir_0294 321047 322246 + DNA-directed DNA polymerase KEGG: dal:Dalk_0024 DNA-directed DNA polymerase gene gene308 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0294 Amir_0295 Amir_0295 Amir_0295 322756 323649 + glycosyl transferase family 2 PFAM: glycosyl transferase family 2~KEGG: dal:Dalk_4823 glycosyl transferase family 2 gene gene310 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0295 Amir_0296 Amir_0296 Amir_0296 323703 325736 - transport system permease protein PFAM: transport system permease protein%3B ABC-3 protein~KEGG: bcb:BCB4264_A4637 iron compound ABC transporter%2C permease protein gene gene311 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0296 Amir_0297 Amir_0297 Amir_0297 325736 326707 - periplasmic binding protein PFAM: periplasmic binding protein~KEGG: bcb:BCB4264_A4636 iron compound ABC transporter%2C iron compound-binding protein gene gene312 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0297 Amir_0298 Amir_0298 Amir_0298 326738 327556 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ent:Ent638_1120 iron-enterobactin transporter ATP-binding protein gene gene313 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0298 Amir_0299 Amir_0299 Amir_0299 328007 328162 + hypothetical protein gene gene314 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0299 Amir_0300 Amir_0300 Amir_0300 328149 329243 - Luciferase-like monooxygenase PFAM: Luciferase-like monooxygenase~KEGG: swi:Swit_1615 coenzyme F420-dependent N5 N10- methylene tetrahydromethanopterin reductase-like protein gene gene315 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0300 Amir_0301 Amir_0301 Amir_0301 329240 329704 - Excalibur domain protein PFAM: Excalibur domain protein~KEGG: GE20613 gene product from transcript GE20613- RA gene gene316 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0301 Amir_0302 Amir_0302 Amir_0302 329694 330653 - Excalibur domain protein PFAM: Excalibur domain protein~KEGG: sal:Sala_0134 excalibur gene gene317 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0302 Amir_0303 Amir_0303 Amir_0303 330650 331321 - nuclease (SNase domain protein) PFAM: nuclease (SNase domain protein)~SMART: nuclease (SNase domain protein)~KEGG: mno:Mnod_4939 hypothetical protein gene gene318 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0303 Amir_0304 Amir_0304 Amir_0304 331443 331889 - hypothetical protein KEGG: pzu:PHZ_c1913 hypothetical protein gene gene319 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0304 Amir_0305 Amir_0305 Amir_0305 332019 332537 + transcriptional regulator%2C MarR family PFAM: regulatory protein MarR~SMART: regulatory protein MarR~KEGG: atc:AGR_C_1531 hypothetical protein gene gene320 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0305 Amir_0306 Amir_0306 Amir_0306 332537 334204 + drug resistance transporter%2C EmrB/QacA subfamily TIGRFAM: drug resistance transporter%2C EmrB/QacA subfamily~PFAM: major facilitator superfamily MFS_1~KEGG: ppg:PputGB1_3285 EmrB/QacA family drug resistance transporter gene gene321 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0306 Amir_0307 Amir_0307 Amir_0307 334313 334816 - Inorganic diphosphatase PFAM: Inorganic pyrophosphatase~KEGG: gdi:GDI3491 inorganic pyrophosphatase gene gene322 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0307 Amir_0308 Amir_0308 Amir_0308 334943 337993 + D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D- alanyl-D-alanine-endopeptidase~PFAM: peptidase S13 D-Ala-D-Ala carboxypeptidase C~KEGG: bpm:BURPS1710b_1102 putative lipoprotein gene gene323 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0308 Amir_0309 Amir_0309 Amir_0309 338032 339045 + conserved hypothetical protein gene gene324 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0309 Amir_0310 Amir_0310 Amir_0310 339042 339968 + tRNA(Ile)-lysidine synthetase TIGRFAM: tRNA(Ile)-lysidine synthetase~PFAM: PP-loop domain protein~KEGG: ade:Adeh_1494 tRNA(Ile)-lysidine synthetase- like gene gene325 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0310 Amir_0311 Amir_0311 Amir_0311 339985 340533 + hypoxanthine phosphoribosyltransferase KEGG: spe:Spro_3998 hypoxanthine phosphoribosyltransferase~TIGRFAM: hypoxanthine phosphoribosyltransferase~PFAM: phosphoribosyltransferase gene gene326 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0311 Amir_0312 Amir_0312 Amir_0312 340597 342291 - von Willebrand factor type A PFAM: von Willebrand factor type A~SMART: von Willebrand factor type A~KEGG: dac:Daci_0766 von Willebrand factor type A gene gene327 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0312 Amir_0313 Amir_0313 Amir_0313 342757 344988 + ATP-dependent metalloprotease FtsH KEGG: bcy:Bcer98_0060 ATP-dependent metalloprotease FtsH~TIGRFAM: ATP-dependent metalloprotease FtsH~PFAM: peptidase M41%3B peptidase M41 FtsH extracellular%3B AAA ATPase central domain protein~SMART: AAA ATPase gene gene328 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0313 Amir_0314 Amir_0314 Amir_0314 344985 345614 + GTP cyclohydrolase I KEGG: bha:BH1646 GTP cyclohydrolase I~TIGRFAM: GTP cyclohydrolase I~PFAM: GTP cyclohydrolase I gene gene329 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0314 Amir_0315 Amir_0315 Amir_0315 345653 346438 + dihydropteroate synthase KEGG: afw:Anae109_2337 dihydropteroate synthase~TIGRFAM: dihydropteroate synthase~PFAM: dihydropteroate synthase DHPS gene gene330 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0315 Amir_0316 Amir_0316 Amir_0316 346431 346808 + dihydroneopterin aldolase TIGRFAM: dihydroneopterin aldolase~PFAM: dihydroneopterin aldolase~KEGG: oca:OCAR_6643 dihydroneopterin aldolase gene gene331 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0316 Amir_0317 Amir_0317 Amir_0317 346805 347281 + 2-amino-4-hydroxy-6-hydroxymethyldihydropteridin epyrophosphokinase KEGG: mex:Mext_1812 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase~TIGRFAM:2-amino-4-hydroxy-6-hydroxymethyldihydropter idinepyrophosphokinase~PFAM: 78-dihydro-6-hydroxymethylpterin- pyrophosphokinase HPPK gene gene332 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0317 Amir_0318 Amir_0318 Amir_0318 347278 347730 + hypothetical protein KEGG: afw:Anae109_2860 cytochrome c oxidase subunit III gene gene333 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0318 Amir_0319 Amir_0319 Amir_0319 347781 349451 + hypothetical protein KEGG: mgm:Mmc1_2162 TPR repeat-containing protein gene gene334 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0319 Amir_0320 Amir_0320 Amir_0320 349936 351012 - NADH dehydrogenase (quinone) PFAM: NADH-ubiquinone oxidoreductase chain 49kDa~KEGG: bcz:BCZK4997 NADH dehydrogenase subunit D gene gene335 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0320 Amir_0321 Amir_0321 Amir_0321 351017 351454 - protein of unknown function DUF1203 PFAM: protein of unknown function DUF1203~KEGG: rle:RL1972 hypothetical protein gene gene336 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0321 Amir_0322 Amir_0322 Amir_0322 351540 352457 + protein of unknown function DUF185 PFAM: protein of unknown function DUF185~KEGG: lch:Lcho_0104 hypothetical protein gene gene337 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0322 Amir_0323 Amir_0323 Amir_0323 352527 353855 + putative membrane protein KEGG: scl:sce5075 hypothetical protein gene gene338 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0323 Amir_0324 Amir_0324 Amir_0324 353944 354837 + putative cytoplasmic protein KEGG: sat:SYN_02774 putative cytoplasmic protein gene gene339 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0324 Amir_0325 Amir_0325 Amir_0325 354841 355731 + pantoate/beta-alanine ligase KEGG: mno:Mnod_1014 pantoate/beta-alanine ligase~TIGRFAM: pantoate/beta-alanine ligase~PFAM: Pantoate-beta-alanine ligase gene gene340 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0325 Amir_0326 Amir_0326 Amir_0326 355746 356216 + aspartate 1-decarboxylase KEGG: bcb:BCB4264_A1597 aspartate 1-decarboxylase~TIGRFAM: aspartate 1-decarboxylase~PFAM: aspartate decarboxylase gene gene341 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0326 Amir_0327 Amir_0327 Amir_0327 356227 357012 + putative transcriptional acitvator%2C Baf family TIGRFAM: transcriptional activator%2C Baf family~PFAM: Bvg accessory factor~KEGG: ank:AnaeK_1477 putative transcriptional acitvator%2C Baf family gene gene342 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0327 Amir_0328 Amir_0328 Amir_0328 357087 357866 - Methyltransferase type 11 PFAM: Methyltransferase type 11%3B Methyltransferase type 12~KEGG: mno:Mnod_8065 methyltransferase type 11 gene gene343 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0328 Amir_0329 Amir_0329 Amir_0329 357929 359440 + lysyl-tRNA synthetase TIGRFAM: lysyl-tRNA synthetase~PFAM: tRNA synthetase class II (D K and N)%3B nucleic acid binding OB-fold tRNA/helicase-type~KEGG: dal:Dalk_1784 lysyl-tRNA synthetase gene gene344 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0329 Amir_0330 Amir_0330 Amir_0330 359559 359909 + hypothetical protein gene gene345 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0330 Amir_0331 Amir_0331 Amir_0331 360226 361230 + transport system permease protein PFAM: transport system permease protein~KEGG: pde:Pden_3523 transport system permease protein gene gene346 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0331 Amir_0332 Amir_0332 Amir_0332 361227 362411 + transport system permease protein PFAM: transport system permease protein~KEGG: ppg:PputGB1_1806 transport system permease protein gene gene347 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0332 Amir_0333 Amir_0333 Amir_0333 362408 363256 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: cvi:CV_2234 enterobactin-iron transport system ATP-binding protein gene gene348 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0333 Amir_0334 Amir_0334 Amir_0334 363284 364099 - hypothetical protein KEGG: hypothetical protein gene gene349 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0334 Amir_0335 Amir_0335 Amir_0335 364370 366928 + ATPase AAA-2 domain protein PFAM: ATPase AAA-2 domain protein%3B AAA ATPase central domain protein%3B UvrB/UvrC protein%3B ATPase associated with various cellular activities AAA_5%3B Clp domain protein~SMART: AAA ATPase~KEGG: bha:BH0103 class III stress response-related ATPase gene gene350 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0335 Amir_0336 Amir_0336 Amir_0336 367074 367718 - pyrrolidone-carboxylate peptidase KEGG: saz:Sama_0018 pyroglutamyl-peptidase I~TIGRFAM: pyrrolidone-carboxylate peptidase~PFAM: peptidase C15 pyroglutamyl peptidase I gene gene351 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0336 Amir_0337 Amir_0337 Amir_0337 367737 368708 + Endonuclease/exonuclease/phosphatase PFAM: Endonuclease/exonuclease/phosphatase~KEGG: afw:Anae109_1227 endonuclease/exonuclease/phosphatase gene gene352 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0337 Amir_0338 Amir_0338 Amir_0338 368769 369539 - Silent information regulator protein Sir2 PFAM: Silent information regulator protein Sir2~KEGG: afw:Anae109_4302 silent information regulator protein Sir2 gene gene353 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0338 Amir_0339 Amir_0339 Amir_0339 369553 369864 - Antibiotic biosynthesis monooxygenase PFAM: Antibiotic biosynthesis monooxygenase~KEGG: afr:AFE_2662 antibiotic biosynthesis monooxygenase family protein gene gene354 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0339 Amir_0340 Amir_0340 Amir_0340 369874 371352 - Peptidase M1 membrane alanine aminopeptidase PFAM: Peptidase M1 membrane alanine aminopeptidase~KEGG: mxa:MXAN_0644 peptidase%2C M1 (aminopeptidase N) family gene gene355 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0340 Amir_0341 Amir_0341 Amir_0341 371370 372116 + alpha/beta hydrolase fold protein PFAM: alpha/beta hydrolase fold~KEGG: ppg:PputGB1_4047 alpha/beta hydrolase fold gene gene356 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0341 Amir_0342 Amir_0342 Amir_0342 372065 372571 - hypothetical protein gene gene357 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0342 Amir_0343 Amir_0343 Amir_0343 372629 373618 - HhH-GPD family protein PFAM: HhH-GPD family protein%3B helix-hairpin-helix motif~SMART: HhH-GPD family protein~KEGG: scl:sce3935 A/G-specific adenine glycosylase gene gene358 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0343 Amir_0344 Amir_0344 Amir_0344 373677 374168 - carbonic anhydrase PFAM: carbonic anhydrase~KEGG: aba:Acid345_1601 carbonic anhydrase gene gene359 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0344 Amir_0345 Amir_0345 Amir_0345 374248 375048 + hypothetical protein KEGG: hypothetical protein%3B K05747 Wiskott-Aldrich syndrome protein gene gene360 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0345 Amir_0346 Amir_0346 Amir_0346 375152 376255 - transcriptional regulator%2C LacI family PFAM: periplasmic binding protein/LacI transcriptional regulator~SMART: regulatory protein LacI~KEGG: gox:GOX0577 transcriptional regulator gene gene361 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0346 Amir_0347 Amir_0347 Amir_0347 376377 377420 - transcriptional regulator%2C LacI family KEGG: pen:PSEEN1955 ribose operon repressor RbsR~PFAM: periplasmic binding protein/LacI transcriptional regulator%3B regulatory protein LacI~SMART: regulatory protein LacI gene gene362 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0347 Amir_0348 Amir_0348 Amir_0348 377686 378945 + extracellular solute-binding protein family 1 PFAM: extracellular solute-binding protein family 1~KEGG: oan:Oant_3895 extracellular solute-binding protein family 1 gene gene363 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0348 Amir_0349 Amir_0349 Amir_0349 379013 379930 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ade:Adeh_4135 ABC sugar transporter%2C inner membrane subunit gene gene364 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0349 Amir_0350 Amir_0350 Amir_0350 379930 380823 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: acp:A2cp1_4287 binding-protein-dependent transport systems inner membrane component gene gene365 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0350 Amir_0351 Amir_0351 Amir_0351 380907 382007 + ABC transporter related PFAM: ABC transporter related%3B Transport-associated OB domain protein~SMART: AAA ATPase~KEGG: rlt:Rleg2_5484 ABC transporter related gene gene366 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0351 Amir_0352 Amir_0352 Amir_0352 382167 383057 + periplasmic solute binding protein PFAM: periplasmic solute binding protein~KEGG: bpy:Bphyt_0292 periplasmic solute binding protein gene gene367 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0352 Amir_0353 Amir_0353 Amir_0353 383054 383896 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: bvi:Bcep1808_2715 ABC transporter related gene gene368 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0353 Amir_0354 Amir_0354 Amir_0354 383896 384732 + ABC-3 protein PFAM: ABC-3 protein~KEGG: bxe:Bxe_A0715 ABC Mn2+/Zn2+ transporter%2C inner membrane subunit gene gene369 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0354 Amir_0355 Amir_0355 Amir_0355 384876 386333 - diguanylate cyclase KEGG: cvi:CV_3252 hypothetical protein~TIGRFAM: diguanylate cyclase~PFAM: GGDEF domain containing protein~SMART: GGDEF domain containing protein gene gene370 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0355 Amir_0356 Amir_0356 Amir_0356 386565 387788 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: reh:H16_B2569 putative MFS transporter gene gene371 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0356 Amir_0357 Amir_0357 Amir_0357 388223 388399 + hypothetical protein gene gene372 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0357 Amir_0358 Amir_0358 Amir_0358 388670 390100 - membrane bound O-acyl transferase MBOAT family protein PFAM: membrane bound O-acyl transferase MBOAT family protein~KEGG: ppw:PputW619_0881 membrane bound O-acyl transferase MBOAT family protein gene gene373 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0358 Amir_0359 Amir_0359 Amir_0359 390193 391158 - RNA methyltransferase%2C TrmH family%2C group 3 TIGRFAM: RNA methyltransferase%2C TrmH family%2C group 3~PFAM: tRNA/rRNA methyltransferase (SpoU)%3B RNA 2-O ribose methyltransferase substrate binding~KEGG: afw:Anae109_2230 RNA methyltransferase gene gene374 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0359 Amir_0360 Amir_0360 Amir_0360 391164 392558 - cysteinyl-tRNA synthetase KEGG: aeh:Mlg_1810 cysteinyl-tRNA synthetase~TIGRFAM: cysteinyl-tRNA synthetase~PFAM: Cysteinyl-tRNA synthetase class Ia%3B Cysteinyl-tRNA synthetase class Ia DALR%3B tRNA synthetase class I (M) gene gene375 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0360 Amir_0361 Amir_0361 Amir_0361 392625 393236 - HAD-superfamily hydrolase%2C subfamily IA%2C variant 2 (HAD-like) TIGRFAM: HAD-superfamily hydrolase%2C subfamily IA%2C variant 2 (HAD-like)%3B HAD-superfamily hydrolase%2C subfamily IA%2C variant 1~PFAM: Haloacid dehalogenase domain protein hydrolase~KEGG: haloacid dehalogenase-like hydrolase family protein gene gene376 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0361 Amir_0362 Amir_0362 Amir_0362 393471 393938 - 2C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase KEGG: eli:ELI_06290 bifunctional 2-C-methyl-D- erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D- erythritol 2%2C4-cyclodiphosphate synthase protein~TIGRFAM: 2C-methyl-D-erythritol 2%2C4- cyclodiphosphate synthase~PFAM: MECDP-synthase gene gene377 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0362 Amir_0363 Amir_0363 Amir_0363 393935 394627 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase~PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase~KEGG: bcr:BCAH187_A0116 2-C-methyl-D-erythritol 4- phosphate cytidylyltransferase gene gene378 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0363 Amir_0364 Amir_0364 Amir_0364 394663 395151 - transcriptional regulator%2C CarD family PFAM: transcription factor CarD~KEGG: bcb:BCB4264_A4827 transcriptional regulator%2C CarD family gene gene379 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0364 Amir_0365 Amir_0365 Amir_0365 395536 396153 + hypothetical protein KEGG: YALI0C03894p gene gene380 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0365 Amir_0366 Amir_0366 Amir_0366 396591 397979 + DNA repair protein RadA KEGG: ppd:Ppro_0422 DNA repair protein RadA~TIGRFAM: DNA repair protein RadA~SMART: AAA ATPase gene gene381 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0366 Amir_0367 Amir_0367 Amir_0367 398370 399224 - helix-turn-helix domain protein SMART: helix-turn-helix domain protein~KEGG: bur:Bcep18194_B2467 XRE family transcriptional regulator gene gene382 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0367 Amir_0368 Amir_0368 Amir_0368 399383 400234 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B KR domain protein~KEGG: reh:H16_B1910 short chain dehydrogenase gene gene383 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0368 Amir_0369 Amir_0369 Amir_0369 400283 400516 + pseudogene gene384 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0369 Amir_0370 Amir_0370 Amir_0370 400639 403167 - trehalose-phosphatase TIGRFAM: trehalose-phosphatase%3B HAD-superfamily hydrolase%2C subfamily IIB~PFAM: glycoside hydrolase 15-related%3B trehalose- phosphatase~KEGG: nmu:Nmul_A2309 glycoside hydrolase 15-like protein gene gene385 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0370 Amir_0371 Amir_0371 Amir_0371 403246 404682 - Alpha%2Calpha-trehalose-phosphate synthase (UDP- forming) PFAM: glycosyl transferase family 20~KEGG: scl:sce0488 Alpha%2Calpha-trehalose-phosphate synthase (UDP-forming) gene gene386 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0371 Amir_0372 Amir_0372 Amir_0372 404791 406185 - protein of unknown function DUF1212 PFAM: protein of unknown function DUF1212~KEGG: rpt:Rpal_1546 protein of unknown function DUF1212 gene gene387 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0372 Amir_0373 Amir_0373 Amir_0373 406208 406471 + pseudogene gene388 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0373 Amir_0374 Amir_0374 Amir_0374 407108 408085 + putative transcriptional regulator%2C ArsR family SMART: regulatory protein ArsR~KEGG: ajs:Ajs_2855 ArsR family transcriptional regulator gene gene390 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0374 Amir_0375 Amir_0375 Amir_0375 408188 409822 - methyl-accepting chemotaxis sensory transducer PFAM: chemotaxis sensory transducer%3B histidine kinase HAMP region domain protein~SMART: chemotaxis sensory transducer%3B histidine kinase HAMP region domain protein~KEGG: aba:Acid345_1672 methyl-accepting chemotaxis sensory transducer gene gene391 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0375 Amir_0376 Amir_0376 Amir_0376 409989 411551 - methyl-accepting chemotaxis sensory transducer with GAF sensor PFAM: chemotaxis sensory transducer%3B GAF domain protein~SMART: chemotaxis sensory transducer%3B GAF domain protein~KEGG: aba:Acid345_1672 methyl-accepting chemotaxis sensory transducer gene gene392 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0376 Amir_0377 Amir_0377 Amir_0377 411724 413376 - von Willebrand factor type A PFAM: von Willebrand factor type A~SMART: von Willebrand factor type A~KEGG: mxa:MXAN_6334 hypothetical protein gene gene393 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0377 Amir_0378 Amir_0378 Amir_0378 413875 415284 - histidine kinase PFAM: ATP-binding region ATPase domain protein%3B histidine kinase HAMP region domain protein%3B histidine kinase A domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B histidine kinase HAMP region domain protein~KEGG: gbm:Gbem_2673 heavy metal sensor signal transduction histidine kinase gene gene394 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0378 Amir_0379 Amir_0379 Amir_0379 415284 415985 - two component transcriptional regulator%2C winged helix family PFAM: response regulator receiver%3B transcriptional regulator domain protein~SMART: response regulator receiver~KEGG: bat:BAS2056 DNA-binding response regulator gene gene395 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0379 Amir_0380 Amir_0380 Amir_0380 416139 417482 + Ferric reductase domain protein transmembrane component domain PFAM: Ferric reductase domain protein transmembrane component domain%3B oxidoreductase FAD/NAD(P)-binding domain protein%3B Oxidoreductase FAD-binding domain protein%3B FAD-binding 8 domain protein~KEGG: ank:AnaeK_0310 oxidoreductase FAD/NAD(P)- binding domain protein gene gene396 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0380 Amir_0381 Amir_0381 Amir_0381 417520 417927 + FMN-binding domain protein PFAM: FMN-binding domain protein~KEGG: mlo:mll6621 hypothetical protein gene gene397 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0381 Amir_0382 Amir_0382 Amir_0382 417932 418645 + ApbE family lipoprotein PFAM: ApbE family lipoprotein~KEGG: mlo:mll6620 thiamine biosynthesis lipoprotein gene gene398 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0382 Amir_0383 Amir_0383 Amir_0383 418924 419154 - hypothetical protein gene gene399 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0383 Amir_0384 Amir_0384 Amir_0384 419414 420451 - ADP-ribosylation/Crystallin J1 PFAM: ADP-ribosylation/Crystallin J1~KEGG: dol:Dole_0265 ADP-ribosylation/crystallin J1 gene gene400 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0384 Amir_0385 Amir_0385 Amir_0385 420623 423445 + transcriptional regulator%2C SARP family PFAM: transcriptional activator domain%3B NB-ARC domain protein%3B transcriptional regulator domain protein~KEGG: scl:sce8759 hypothetical protein gene gene401 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0385 Amir_0386 Amir_0386 Amir_0386 423636 424412 - lipolytic protein G-D-S-L family PFAM: lipolytic protein G-D-S-L family~KEGG: bcb:BCB4264_A2458 hypothetical protein gene gene402 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0386 Amir_0387 Amir_0387 Amir_0387 424515 424955 - hypothetical protein gene gene403 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0387 Amir_0388 Amir_0388 Amir_0388 425108 425854 + hypothetical protein gene gene404 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0388 Amir_0389 Amir_0389 Amir_0389 425911 426903 - Luciferase-like monooxygenase PFAM: Luciferase-like monooxygenase~KEGG: sme:SM_b21003 putative oxidoreductase protein gene gene405 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0389 Amir_0390 Amir_0390 Amir_0390 427020 427901 + transcriptional regulator%2C LysR family PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: acr:Acry_2830 LysR family transcriptional regulator gene gene406 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0390 Amir_0391 Amir_0391 Amir_0391 428065 429006 - ATPase BadF/BadG/BcrA/BcrD type PFAM: ATPase BadF/BadG/BcrA/BcrD type~KEGG: slo:Shew_1116 ATPase%2C BadF/BadG/BcrA/BcrD type gene gene407 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0391 Amir_0392 Amir_0392 Amir_0392 429003 432230 - peptidase S8 and S53 subtilisin kexin sedolisin PFAM: peptidase S8 and S53 subtilisin kexin sedolisin~KEGG: glo:Glov_1721 peptidase S8 and S53 subtilisin kexin sedolisin gene gene408 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0392 Amir_0393 Amir_0393 Amir_0393 432351 433205 + 5-oxopent-3-ene-1%2C2%2C5-tricarboxylatedecarboxylas e PFAM: fumarylacetoacetate (FAA) hydrolase~KEGG: rle:RL0016 putative FAA hydrolase family protein gene gene409 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0393 Amir_0394 Amir_0394 Amir_0394 433205 434617 + Mandelate racemase/muconate lactonizing protein PFAM: Mandelate racemase/muconate lactonizing protein~KEGG: xca:xccb100_4271 phosphopyruvate hydratase gene gene410 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0394 Amir_0395 Amir_0395 Amir_0395 434593 435363 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B KR domain protein%3B NAD-dependent epimerase/dehydratase~KEGG: bpe:BP1923 short chain dehydrogenase gene gene411 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0395 Amir_0396 Amir_0396 Amir_0396 435360 436289 + aldo/keto reductase PFAM: aldo/keto reductase~KEGG: xac:XAC4184 oxidoreductase gene gene412 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0396 Amir_0397 Amir_0397 Amir_0397 436286 437110 + amidohydrolase 2 PFAM: amidohydrolase 2~KEGG: mes:Meso_1610 amidohydrolase 2 gene gene413 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0397 Amir_0398 Amir_0398 Amir_0398 437177 438277 + Serine-type D-Ala-D-Ala carboxypeptidase PFAM: beta-lactamase~KEGG: bcz:pE33L466_0099 D-stereospecific peptide hydrolase gene gene414 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0398 Amir_0399 Amir_0399 Amir_0399 438344 439018 - GntR domain protein PFAM: GntR domain protein%3B regulatory protein GntR HTH~SMART: regulatory protein GntR HTH~KEGG: csa:Csal_0365 transcriptional regulator%2C GntR family gene gene415 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0399 Amir_0400 Amir_0400 Amir_0400 439140 440183 - Glutamine--fructose-6-phosphate transaminase (isomerizing) PFAM: sugar isomerase (SIS)~KEGG: sus:Acid_1598 glutamine--fructose-6-phosphate transaminase (isomerizing) gene gene416 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0400 Amir_0401 Amir_0401 Amir_0401 440530 441351 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: jan:Jann_3555 binding-protein-dependent transport systems inner membrane component gene gene417 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0401 Amir_0402 Amir_0402 Amir_0402 441348 442340 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: bxe:Bxe_B0419 ABC sugar transporter%2C inner membrane subunit gene gene418 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0402 Amir_0403 Amir_0403 Amir_0403 442348 443628 - extracellular solute-binding protein family 1 PFAM: extracellular solute-binding protein family 1~KEGG: mlo:mll4149 sugar ABC transporter%2C (sugar- binding protein) gene gene419 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0403 Amir_0404 Amir_0404 Amir_0404 443873 444622 + transcriptional regulator%2C GntR family PFAM: UbiC transcription regulator-associated domain protein%3B regulatory protein GntR HTH~SMART: regulatory protein GntR HTH~KEGG: bcy:Bcer98_2752 GntR family transcriptional regulator gene gene420 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0404 Amir_0405 Amir_0405 Amir_0405 444671 445618 - Pyridoxal-5'-phosphate-dependent protein beta subunit PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit~KEGG: aba:Acid345_2084 pyridoxal-5'-phosphate- dependent enzyme%2C beta subunit gene gene421 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0405 Amir_0406 Amir_0406 Amir_0406 446394 447158 - Extradiol ring-cleavage dioxygenase class III protein subunit B PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B~KEGG: scl:sce0163 hypothetical protein gene gene422 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0406 Amir_0407 Amir_0407 Amir_0407 447158 447916 - thiamine-phosphate pyrophosphorylase KEGG: pca:Pcar_0607 thiamin biosynthesis protein~TIGRFAM: thiamine-phosphate pyrophosphorylase~PFAM: thiamine monophosphate synthase gene gene423 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0407 Amir_0408 Amir_0408 Amir_0408 448503 449510 + glycine oxidase ThiO TIGRFAM: glycine oxidase ThiO~PFAM: FAD dependent oxidoreductase~KEGG: azc:AZC_3554 putative glycine oxidase precursor gene gene424 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0408 Amir_0409 Amir_0409 Amir_0409 449507 449704 + thiamine biosynthesis protein ThiS TIGRFAM: thiamine biosynthesis protein ThiS~PFAM: thiamineS protein~KEGG: mms:mma_0316 thiamine biosynthesis protein ThiS gene gene425 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0409 Amir_0410 Amir_0410 Amir_0410 449707 450495 + thiazole biosynthesis family protein PFAM: thiazole biosynthesis family protein~KEGG: rce:RC1_3100 thiazole biosynthesis protein ThiG gene gene426 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0410 Amir_0411 Amir_0411 Amir_0411 450580 450999 + transcriptional regulator%2C MarR family PFAM: regulatory protein MarR~SMART: regulatory protein MarR~KEGG: bcm:Bcenmc03_5734 MarR family transcriptional regulator gene gene427 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0411 Amir_0412 Amir_0412 Amir_0412 451015 451833 - O-methyltransferase domain protein PFAM: O-methyltransferase domain protein~KEGG: mlo:mll3178 hypothetical protein gene gene428 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0412 Amir_0413 Amir_0413 Amir_0413 451917 452123 - protein of unknown function DUF397 PFAM: protein of unknown function DUF397 gene gene429 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0413 Amir_0414 Amir_0414 Amir_0414 452143 452997 - helix-turn-helix domain protein PFAM: helix-turn-helix domain protein~SMART: helix-turn-helix domain protein gene gene430 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0414 Amir_0415 Amir_0415 Amir_0415 453216 453383 + conserved hypothetical protein KEGG: hypothetical protein gene gene431 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0415 Amir_0416 Amir_0416 Amir_0416 453387 453620 + hypothetical protein gene gene432 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0416 Amir_0417 Amir_0417 Amir_0417 453617 453964 + hypothetical protein gene gene433 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0417 Amir_0418 Amir_0418 Amir_0418 453918 454655 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B KR domain protein%3B NAD-dependent epimerase/dehydratase~KEGG: bph:Bphy_4607 short-chain dehydrogenase/reductase SDR gene gene434 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0418 Amir_0419 Amir_0419 Amir_0419 454677 455330 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: bxe:Bxe_B1146 TetR family transcriptional regulator gene gene435 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0419 Amir_0420 Amir_0420 Amir_0420 455336 456040 - putative hydrolase protein KEGG: rec:RHECIAT_CH0002869 putative hydrolase protein gene gene436 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0420 Amir_0421 Amir_0421 Amir_0421 456177 456746 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: smd:Smed_4442 transcriptional regulator%2C TetR family gene gene437 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0421 Amir_0422 Amir_0422 Amir_0422 456953 457957 - Alcohol dehydrogenase GroES domain protein PFAM: Alcohol dehydrogenase GroES domain protein%3B Alcohol dehydrogenase zinc-binding domain protein~KEGG: cak:Caul_0434 alcohol dehydrogenase gene gene438 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0422 Amir_0423 Amir_0423 Amir_0423 458084 458638 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: cak:Caul_0435 TetR family transcriptional regulator gene gene439 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0423 Amir_0424 Amir_0424 Amir_0424 458684 459514 - phosphomethylpyrimidine kinase TIGRFAM: phosphomethylpyrimidine kinase~PFAM: Phosphomethylpyrimidine kinase type-1~KEGG: sfu:Sfum_1692 phosphomethylpyrimidine kinase gene gene440 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0424 Amir_0425 Amir_0425 Amir_0425 459516 461159 - thiamine biosynthesis protein ThiC TIGRFAM: thiamine biosynthesis protein ThiC~PFAM: thiamine biosynthesis protein ThiC~KEGG: bsu:BSU08790 thiamine biosynthesis protein ThiC gene gene441 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0425 Amir_0426 Amir_0426 Amir_0426 461485 462102 + hypothetical protein gene gene442 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0426 Amir_0427 Amir_0427 Amir_0427 462297 462884 - peptide deformylase KEGG: pmr:PMI2825 peptide deformylase~TIGRFAM: peptide deformylase~PFAM: formylmethionine deformylase gene gene443 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0427 Amir_0428 Amir_0428 Amir_0428 463048 463332 + hypothetical protein gene gene444 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0428 Amir_0429 Amir_0429 Amir_0429 463329 463991 + hypothetical protein KEGG: hypothetical protein gene gene445 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0429 Amir_0430 Amir_0430 Amir_0430 464055 464762 - transcriptional regulator%2C GntR family PFAM: GntR domain protein%3B regulatory protein GntR HTH~SMART: regulatory protein GntR HTH~KEGG: mes:Meso_0568 transcriptional regulator%2C GntR family gene gene446 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0430 Amir_0431 Amir_0431 Amir_0431 464849 465946 + NADH:flavin oxidoreductase/NADH oxidase PFAM: NADH:flavin oxidoreductase/NADH oxidase~KEGG: gme:Gmet_2577 NADH:flavin oxidoreductase/NADH oxidase gene gene447 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0431 Amir_0432 Amir_0432 Amir_0432 466404 468608 + Microtubule-severing ATPase KEGG: mrd:Mrad2831_5798 AAA family ATPase%2C CDC48 subfamily protein~PFAM: AAA ATPase central domain protein~SMART: AAA ATPase gene gene448 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0432 Amir_0433 Amir_0433 Amir_0433 468892 469416 + RNA polymerase%2C sigma-24 subunit%2C ECF subfamily TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family~PFAM: sigma-70 region 4 domain protein%3B Sigma-70 region 4 type 2%3B sigma-70 region 2 domain protein~KEGG: scl:sce7901 ECF family RNA polymerase sigma factor gene gene449 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0433 Amir_0434 Amir_0434 Amir_0434 469413 470174 + DnaJ domain protein KEGG: mxa:MXAN_3349 DnaJ domain protein gene gene450 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0434 Amir_0435 Amir_0435 Amir_0435 470346 471323 - CDP-diacylglycerol/serineO-phosphatidyltransfera se KEGG: mag:amb0603 phosphatidylserine synthase~TIGRFAM: CDP-diacylglycerol/serine O- phosphatidyltransferase~PFAM: CDP-alcohol phosphatidyltransferase gene gene451 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0435 Amir_0436 Amir_0436 Amir_0436 471327 472040 - phosphatidylserine decarboxylase related protein KEGG: rce:RC1_1432 phosphatidylserine decarboxylase- like protein%2C putative~TIGRFAM: phosphatidylserine decarboxylase related protein~PFAM: phosphatidylserine decarboxylase-related gene gene452 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0436 Amir_0437 Amir_0437 Amir_0437 472257 473768 - peptidase M48 Ste24p PFAM: peptidase M48 Ste24p~KEGG: sfu:Sfum_1032 peptidase M48%2C Ste24p gene gene453 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0437 Amir_0438 Amir_0438 Amir_0438 473915 475120 - molybdenum cofactor synthesis domain protein TIGRFAM: molybdenum cofactor synthesis domain protein~PFAM: MoeA domain protein domain I and II%3B MoeA domain protein domain IV%3B molybdopterin binding domain~KEGG: afw:Anae109_1445 molybdenum cofactor synthesis domain-containing protein gene gene454 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0438 Amir_0439 Amir_0439 Amir_0439 475190 475798 + protein of unknown function DUF124 PFAM: protein of unknown function DUF124~KEGG: hypothetical protein gene gene455 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0439 Amir_0440 Amir_0440 Amir_0440 475930 476136 + cold-shock DNA-binding domain protein PFAM: Cold-shock protein DNA-binding~SMART: Cold shock protein~KEGG: ank:AnaeK_2630 cold-shock DNA-binding domain protein gene gene456 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0440 Amir_0441 Amir_0441 Amir_0441 476271 477605 + serine/threonine protein kinase PFAM: Serine/threonine protein kinase-related%3B tyrosine protein kinase%3B protein of unknown function RIO1~SMART: serine/threonine protein kinase%3B tyrosine protein kinase~KEGG: ade:Adeh_1074 serine/threonine protein kinase gene gene457 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0441 Amir_0442 Amir_0442 Amir_0442 477845 479467 + chaperonin GroEL TIGRFAM: chaperonin GroEL~PFAM: chaperonin Cpn60/TCP-1~KEGG: bcb:BCB4264_A0298 chaperonin GroL gene gene458 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0442 Amir_0443 Amir_0443 Amir_0443 479947 480444 - hypothetical protein gene gene459 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0443 Amir_0444 Amir_0444 Amir_0444 480441 481046 - RNA polymerase%2C sigma-24 subunit%2C ECF subfamily TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family~PFAM: sigma-70 region 2 domain protein~KEGG: sus:Acid_3132 ECF subfamily RNA polymerase sigma-24 factor gene gene460 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0444 Amir_0445 Amir_0445 Amir_0445 481427 482101 + CutC family protein PFAM: CutC family protein~KEGG: bcj:BCAL0655 CutC family protein gene gene461 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0445 Amir_0446 Amir_0446 Amir_0446 482648 483922 + extracellular solute-binding protein family 1 PFAM: extracellular solute-binding protein family 1~KEGG: rle:pRL100263 putative substrate-binding component of ABC transporter gene gene462 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0446 Amir_0447 Amir_0447 Amir_0447 483919 484830 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: mxa:MXAN_7294 putative sugar ABC transporter%2C permease protein gene gene463 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0447 Amir_0448 Amir_0448 Amir_0448 484827 485660 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: rlt:Rleg2_3667 binding-protein-dependent transport systems inner membrane component gene gene464 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0448 Amir_0449 Amir_0449 Amir_0449 485657 487000 + Beta-N-acetylhexosaminidase PFAM: Glycoside hydrolase%2C family 20%2C catalytic core~KEGG: nar:Saro_2417 beta-N-acetylhexosaminidase gene gene465 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0449 Amir_0450 Amir_0450 Amir_0450 487001 487255 - phage shock protein C%2C PspC PFAM: PspC domain protein~KEGG: cbc:CbuK_0644 stress-responsive transcriptional regulator gene gene466 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0450 Amir_0451 Amir_0451 Amir_0451 487494 488600 + protein of unknown function DUF182 PFAM: protein of unknown function DUF182~KEGG: msl:Msil_0236 protein of unknown function DUF182 gene gene467 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0451 Amir_0452 Amir_0452 Amir_0452 489427 490365 + Mandelate racemase/muconate lactonizing protein PFAM: Mandelate racemase/muconate lactonizing protein~KEGG: bca:BCE_2879 mandelate racemase/muconate lactonizing enzyme family protein gene gene468 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0452 Amir_0453 Amir_0453 Amir_0453 490565 492217 - type III restriction protein res subunit PFAM: type III restriction protein res subunit%3B helicase domain protein~SMART: DEAD-like helicase%3B helicase domain protein~KEGG: SSL2%3B DNA helicase%3B K10843 DNA excision repair protein ERCC-3 gene gene469 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0453 Amir_0454 Amir_0454 Amir_0454 492343 492873 + hypothetical protein gene gene470 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0454 Amir_0455 Amir_0455 Amir_0455 492929 493387 + hypothetical protein gene gene471 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0455 Amir_0456 Amir_0456 Amir_0456 493478 494566 + hypothetical protein KEGG: Prp2%3B proline rich protein 2 gene gene472 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0456 Amir_0457 Amir_0457 Amir_0457 494631 495632 - ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components KEGG: twin-arginine translocation pathway signal%3B K02051 sulfonate/nitrate/taurine transport system substrate-binding protein gene gene473 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0457 Amir_0458 Amir_0458 Amir_0458 496042 499320 + putative sensor with HAMP domain PFAM: ATP-binding region ATPase domain protein%3B histidine kinase HAMP region domain protein%3B Nitrate and nitrite sensing domain protein~SMART: ATP-binding region ATPase domain protein~KEGG: mag:amb3383 methyl-accepting chemotaxis protein gene gene474 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0458 Amir_0459 Amir_0459 Amir_0459 499317 499736 + Roadblock/LC7 family protein PFAM: Roadblock/LC7 family protein~KEGG: pna:Pnap_2813 roadblock/LC7 family protein gene gene475 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0459 Amir_0460 Amir_0460 Amir_0460 499962 500510 + protein of unknown function DUF742 PFAM: protein of unknown function DUF742 gene gene476 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0460 Amir_0461 Amir_0461 Amir_0461 500491 501099 + protein of unknown function ATP binding PFAM: protein of unknown function ATP binding~KEGG: nmn:NMCC_1665 hypothetical protein gene gene477 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0461 Amir_0462 Amir_0462 Amir_0462 501188 502924 - hypothetical protein KEGG: dac:Daci_2082 hypothetical protein gene gene478 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0462 Amir_0463 Amir_0463 Amir_0463 503041 505284 - hypothetical protein KEGG: acp:A2cp1_2891 response regulator receiver gene gene479 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0463 Amir_0464 Amir_0464 Amir_0464 505350 505535 + hypothetical protein gene gene480 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0464 Amir_0465 Amir_0465 Amir_0465 505641 507044 + Malate dehydrogenase (oxaloacetate- decarboxylating) PFAM: malic protein NAD-binding%3B malic protein domain protein~KEGG: sat:SYN_00517 NAD-dependent malic enzyme gene gene481 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0465 Amir_0466 Amir_0466 Amir_0466 507285 507758 + molybdenum cofactor biosynthesis protein C TIGRFAM: molybdenum cofactor biosynthesis protein C~PFAM: molybdopterin cofactor biosynthesis MoaC region~KEGG: eli:ELI_06520 molybdopterin cofactor biosynthesis MoaC region gene gene482 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0466 Amir_0467 Amir_0467 Amir_0467 507755 508237 + molybdenum cofactor synthesis domain protein TIGRFAM: molybdenum cofactor synthesis domain protein~PFAM: molybdopterin binding domain~KEGG: sfu:Sfum_0070 molybdenum cofactor synthesis domain gene gene483 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0467 Amir_0468 Amir_0468 Amir_0468 508234 508659 + molybdopterin biosynthesis MoaE protein PFAM: molybdopterin biosynthesis MoaE protein~KEGG: scl:sce2941 molybdopterin-converting factor chain 2 gene gene484 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0468 Amir_0469 Amir_0469 Amir_0469 509101 509775 - Transglycosylase domain protein PFAM: Transglycosylase domain protein~SMART: Peptidoglycan-binding LysM~KEGG: vei:Veis_4083 peptidoglycan-binding LysM gene gene485 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0469 Amir_0470 Amir_0470 Amir_0470 510138 510401 - thiamineS protein PFAM: thiamineS protein~KEGG: ade:Adeh_1120 molybdopterin synthase subunit MoaE / molybdopterin synthase subunit MoaD gene gene486 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0470 Amir_0471 Amir_0471 Amir_0471 510403 511428 - molybdenum cofactor biosynthesis protein A KEGG: sus:Acid_6425 GTP cyclohydrolase subunit MoaA~TIGRFAM: molybdenum cofactor biosynthesis protein A~PFAM: molybdenum cofactor synthesis domain protein%3B Radical SAM domain protein~SMART: Elongator protein 3/MiaB/NifB gene gene487 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0471 Amir_0472 Amir_0472 Amir_0472 511563 512024 + transcriptional regulator%2C MarR family PFAM: regulatory protein MarR~SMART: regulatory protein MarR~KEGG: bja:bll4976 transcriptional regulatory protein gene gene488 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0472 Amir_0473 Amir_0473 Amir_0473 512044 512832 + HAD-superfamily hydrolase%2C subfamily IIA TIGRFAM: HAD-superfamily hydrolase%2C subfamily IIA~PFAM: Haloacid dehalogenase domain protein hydrolase~KEGG: csa:Csal_0794 HAD-superfamily hydrolase%2C subfamily IIA gene gene489 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0473 Amir_0474 Amir_0474 Amir_0474 512991 513695 + protein of unknown function DUF1503 PFAM: protein of unknown function DUF1503~KEGG: scl:sce8705 hypothetical protein gene gene490 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0474 Amir_0475 Amir_0475 Amir_0475 514093 514917 + metallophosphoesterase PFAM: metallophosphoesterase~KEGG: serine/threonine protein phosphatase gene gene491 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0475 Amir_0476 Amir_0476 Amir_0476 514951 515325 - protein of unknown function DUF307 PFAM: protein of unknown function DUF307~KEGG: rpa:RPA0774 hypothetical protein gene gene492 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0476 Amir_0477 Amir_0477 Amir_0477 515358 516356 + oxidoreductase domain protein PFAM: oxidoreductase domain protein%3B homoserine dehydrogenase NAD-binding%3B Oxidoreductase domain~KEGG: similar to dimeric dihydrodiol dehydrogenase gene gene493 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0477 Amir_0478 Amir_0478 Amir_0478 516334 517299 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: bbt:BBta_0237 OmpA family protein gene gene494 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0478 Amir_0479 Amir_0479 Amir_0479 517475 518131 + Haloacid dehalogenase domain protein hydrolase PFAM: Haloacid dehalogenase domain protein hydrolase~KEGG: afw:Anae109_2037 HAD family hydrolase gene gene495 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0479 Amir_0480 Amir_0480 Amir_0480 518202 518405 - hypothetical protein gene gene496 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0480 Amir_0481 Amir_0481 Amir_0481 518534 518929 + cold-shock DNA-binding domain protein PFAM: Cold-shock protein DNA-binding~SMART: Cold shock protein~KEGG: bcy:Bcer98_3497 cold-shock DNA-binding domain- containing protein gene gene497 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0481 Amir_0482 Amir_0482 Amir_0482 519009 519494 - hypothetical protein gene gene498 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0482 Amir_0483 Amir_0483 Amir_0483 519518 521248 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: mrd:Mrad2831_4876 major facilitator transporter gene gene499 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0483 Amir_0484 Amir_0484 Amir_0484 521305 522084 - glutamine cyclotransferase PFAM: glutamine cyclotransferase~KEGG: sus:Acid_3566 glutamine cyclotransferase gene gene500 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0484 Amir_0485 Amir_0485 Amir_0485 522145 523071 + hypothetical protein KEGG: GL17023 gene product from transcript GL17023- RA gene gene501 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0485 Amir_0486 Amir_0486 Amir_0486 523068 525896 + hypothetical protein KEGG: nha:Nham_3709 hypothetical protein gene gene502 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0486 Amir_0487 Amir_0487 Amir_0487 526006 526251 - hypothetical protein gene gene503 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0487 Amir_0488 Amir_0488 Amir_0488 526391 527830 + Xanthine/uracil/vitamin C permease PFAM: Xanthine/uracil/vitamin C permease%3B sulphate transporter~KEGG: acp:A2cp1_3490 xanthine/uracil/vitamin C permease gene gene504 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0488 Amir_0489 Amir_0489 Amir_0489 527995 528441 + transcriptional regulator%2C MarR family PFAM: regulatory protein MarR~SMART: regulatory protein MarR~KEGG: bvi:Bcep1808_5100 MarR family transcriptional regulator gene gene505 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0489 Amir_0490 Amir_0490 Amir_0490 528446 529831 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1%3B protein of unknown function DUF894 DitE~KEGG: bpy:Bphyt_5813 major facilitator superfamily MFS_1 gene gene506 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0490 Amir_0491 Amir_0491 Amir_0491 529828 531102 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1%3B protein of unknown function DUF894 DitE~KEGG: gdi:GDI0684 major facilitator transporter gene gene507 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0491 Amir_0492 Amir_0492 Amir_0492 531287 531916 - Superoxide dismutase PFAM: manganese and iron superoxide dismutase~KEGG: hypothetical protein gene gene508 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0492 Amir_0493 Amir_0493 Amir_0493 532020 533633 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: scl:sce6528 ABC transporter%2C ATP-binding protein gene gene509 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0493 Amir_0494 Amir_0494 Amir_0494 533638 534048 + hypothetical protein gene gene510 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0494 Amir_0495 Amir_0495 Amir_0495 534080 535573 - glutamate--cysteine ligase GCS2 PFAM: glutamate--cysteine ligase GCS2~KEGG: scl:sce0051 hypothetical protein gene gene511 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0495 Amir_0496 Amir_0496 Amir_0496 535700 536551 + tRNA/rRNA methyltransferase (SpoU) PFAM: tRNA/rRNA methyltransferase (SpoU)~KEGG: mes:Meso_2208 tRNA/rRNA methyltransferase (SpoU) gene gene512 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0496 Amir_0497 Amir_0497 Amir_0497 536593 537243 + hypothetical protein KEGG: hypothetical protein gene gene513 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0497 Amir_0498 Amir_0498 Amir_0498 537256 538983 + peptidase S9 prolyl oligopeptidase active site domain protein PFAM: peptidase S9 prolyl oligopeptidase active site domain protein%3B dienelactone hydrolase%3B phospholipase/Carboxylesterase~KEGG: hypothetical protein gene gene514 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0498 Amir_0499 Amir_0499 Amir_0499 539369 540679 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1%3B protein of unknown function DUF894 DitE~KEGG: lpp:lpp1608 hypothetical protein gene gene515 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0499 Amir_0500 Amir_0500 Amir_0500 540751 542352 + polysaccharide lyase family 8 PFAM: polysaccharide lyase family 8%3B polysaccharide lyase 8 alpha-helical~KEGG: vvy:VVA1636 hypothetical protein gene gene516 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0500 Amir_0501 Amir_0501 Amir_0501 542596 543255 - pyridoxamine 5'-phosphate oxidase KEGG: rpi:Rpic_0717 pyridoxamine 5'-phosphate oxidase~TIGRFAM: pyridoxamine 5'-phosphate oxidase~PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding gene gene517 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0501 Amir_0502 Amir_0502 Amir_0502 543312 544157 - urease accessory protein UreD KEGG: scl:sce6547 urease accessory protein UreD gene gene518 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0502 Amir_0503 Amir_0503 Amir_0503 544235 544771 + hypothetical protein gene gene519 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0503 Amir_0504 Amir_0504 Amir_0504 544741 545454 - urease accessory protein UreG TIGRFAM: urease accessory protein UreG~PFAM: cobalamin synthesis protein P47K~KEGG: scl:sce6551 urease accessory protein G gene gene520 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0504 Amir_0505 Amir_0505 Amir_0505 545444 546106 - conserved hypothetical protein KEGG: ank:AnaeK_0974 hypothetical protein gene gene521 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0505 Amir_0506 Amir_0506 Amir_0506 546215 547912 - urease%2C alpha subunit TIGRFAM: urease%2C alpha subunit~PFAM: amidohydrolase%3B Urease alpha-subunit domain protein~KEGG: ank:AnaeK_0975 urease%2C alpha subunit gene gene522 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0506 Amir_0507 Amir_0507 Amir_0507 547909 548220 - urease%2C beta subunit KEGG: atu:Atu2405 urease subunit beta~TIGRFAM: urease%2C beta subunit~PFAM: Urease beta subunit gene gene523 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0507 Amir_0508 Amir_0508 Amir_0508 548279 548581 - urease%2C gamma subunit KEGG: oan:Oant_0332 urease%2C gamma subunit~TIGRFAM: urease%2C gamma subunit~PFAM: Urease gamma subunit region gene gene524 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0508 Amir_0509 Amir_0509 Amir_0509 548814 549929 + Citrate (Si)-synthase PFAM: Citrate synthase~KEGG: pzu:PHZ_c0162 citrate synthase GltA gene gene525 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0509 Amir_0510 Amir_0510 Amir_0510 550082 550912 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: sus:Acid_0079 ABC transporter related gene gene526 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0510 Amir_0511 Amir_0511 Amir_0511 550909 551709 + ABC-2 type transporter PFAM: ABC-2 type transporter~KEGG: mxa:MXAN_1598 ABC transporter%2C permease protein%2C ABC-2 family gene gene527 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0511 Amir_0512 Amir_0512 Amir_0512 551682 552701 + histidine kinase PFAM: histidine kinase dimerization and phosphoacceptor region%3B ATP-binding region ATPase domain protein~KEGG: sus:Acid_1273 integral membrane sensor signal transduction histidine kinase gene gene528 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0512 Amir_0513 Amir_0513 Amir_0513 552766 553395 + two component transcriptional regulator%2C LuxR family PFAM: response regulator receiver%3B regulatory protein LuxR%3B Sigma-70 region 4 type 2~SMART: response regulator receiver%3B regulatory protein LuxR~KEGG: sus:Acid_2683 two component LuxR family transcriptional regulator gene gene529 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0513 Amir_0514 Amir_0514 Amir_0514 553647 554780 + phosphoserine aminotransferase TIGRFAM: phosphoserine aminotransferase~PFAM: aminotransferase class V~KEGG: mmr:Mmar10_0555 phosphoserine aminotransferase gene gene530 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0514 Amir_0515 Amir_0515 Amir_0515 555000 555815 + hypothetical protein gene gene531 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0515 Amir_0516 Amir_0516 Amir_0516 556396 556770 + hypothetical protein gene gene532 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0516 Amir_0517 Amir_0517 Amir_0517 556763 557443 + hypothetical protein KEGG: similar to hedgehog protein gene gene533 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0517 Amir_0518 Amir_0518 Amir_0518 557503 557742 - hypothetical protein gene gene534 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0518 Amir_0519 Amir_0519 Amir_0519 557855 559624 + ABC transporter related PFAM: ABC transporter related%3B ABC transporter transmembrane region~SMART: AAA ATPase~KEGG: rce:RC1_1837 ABC transporter%2C ATP-binding gene gene535 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0519 Amir_0520 Amir_0520 Amir_0520 559621 561579 + ABC transporter related PFAM: ABC transporter related%3B ABC transporter transmembrane region~SMART: AAA ATPase~KEGG: bha:BH1126 ABC transporter ATP-binding protein gene gene536 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0520 Amir_0521 Amir_0521 Amir_0521 562328 562894 + regulatory protein TetR PFAM: regulatory protein TetR~KEGG: gdj:Gdia_1592 regulatory protein TetR gene gene537 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0521 Amir_0522 Amir_0522 Amir_0522 563263 564681 + amino acid permease-associated region PFAM: amino acid permease-associated region~KEGG: bpt:Bpet1644 amino acid transporter gene gene538 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0522 Amir_0523 Amir_0523 Amir_0523 564778 565650 + Aldose 1-epimerase PFAM: Aldose 1-epimerase~KEGG: sfv:SFV_3620 putative aldose-1-epimerase gene gene539 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0523 Amir_0524 Amir_0524 Amir_0524 565670 566863 + amidohydrolase PFAM: amidohydrolase%3B Amidohydrolase 3~KEGG: bha:BH3008 hypothetical protein gene gene540 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0524 Amir_0525 Amir_0525 Amir_0525 566946 568091 - acyl-CoA dehydrogenase domain protein PFAM: acyl-CoA dehydrogenase domain protein%3B Acyl- CoA dehydrogenase type 2 domain~KEGG: bat:BAS5190 acyl-CoA dehydrogenase gene gene541 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0525 Amir_0526 Amir_0526 Amir_0526 568174 568770 + regulatory protein TetR PFAM: regulatory protein TetR~KEGG: rme:Rmet_3794 putative transcriptional regulator%2C TetR family gene gene542 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0526 Amir_0527 Amir_0527 Amir_0527 568767 569705 + PfkB domain protein PFAM: PfkB domain protein~KEGG: sit:TM1040_3042 PfkB gene gene543 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0527 Amir_0528 Amir_0528 Amir_0528 569976 571289 + citrate synthase I KEGG: scl:sce8281 hypothetical protein~TIGRFAM: citrate synthase I~PFAM: Citrate synthase gene gene544 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0528 Amir_0529 Amir_0529 Amir_0529 571555 572820 + Deoxyribodipyrimidine photo-lyase PFAM: DNA photolyase FAD-binding%3B DNA photolyase domain protein~KEGG: cvi:CV_3481 deoxyribodipyrimidine photo-lyase gene gene545 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0529 Amir_0530 Amir_0530 Amir_0530 572906 573550 - two component transcriptional regulator%2C LuxR family PFAM: response regulator receiver%3B regulatory protein LuxR~SMART: regulatory protein LuxR%3B response regulator receiver~KEGG: tgr:Tgr7_2171 two component transcriptional regulator%2C LuxR family gene gene546 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0530 Amir_0531 Amir_0531 Amir_0531 573565 574854 - histidine kinase PFAM: ATP-binding region ATPase domain protein%3B histidine kinase dimerization and phosphoacceptor region~SMART: ATP-binding region ATPase domain protein~KEGG: mmr:Mmar10_2544 putative signal transduction histidine kinase gene gene547 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0531 Amir_0532 Amir_0532 Amir_0532 575005 576246 - ABC-type Na+ efflux pump permease component KEGG: scl:sce9075 hypothetical protein gene gene548 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0532 Amir_0533 Amir_0533 Amir_0533 576243 577196 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: bha:BH1166 ABC transporter ATP-binding protein gene gene549 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0533 Amir_0534 Amir_0534 Amir_0534 577222 577482 - transcriptional regulator%2C XRE family PFAM: helix-turn-helix domain protein~SMART: helix-turn-helix domain protein~KEGG: gdi:GDI1973 putative HTH-type transcriptional regulator gene gene550 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0534 Amir_0535 Amir_0535 Amir_0535 577666 578109 + conserved hypothetical protein PFAM: conserved hypothetical protein~KEGG: lpn:lpg2755 hypothetical protein gene gene551 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0535 Amir_0536 Amir_0536 Amir_0536 578130 578438 + hypothetical protein gene gene552 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0536 Amir_0537 Amir_0537 Amir_0537 578435 580219 + hypothetical protein KEGG: predicted gene%2C 100041170 gene gene553 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0537 Amir_0538 Amir_0538 Amir_0538 580973 582172 + N-isopropylammelide isopropylaminohydrolase PFAM: Amidohydrolase 3~KEGG: bac:BamMC406_5450 N-isopropylammelide isopropylaminohydrolase gene gene554 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0538 Amir_0539 Amir_0539 Amir_0539 582162 583166 - Alcohol dehydrogenase zinc-binding domain protein PFAM: Alcohol dehydrogenase zinc-binding domain protein~KEGG: pzu:PHZ_c1983 alcohol dehydrogenase%2C zinc- containing gene gene555 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0539 Amir_0540 Amir_0540 Amir_0540 583222 583977 - GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: bur:Bcep18194_A4874 GCN5-related N- acetyltransferase gene gene556 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0540 Amir_0541 Amir_0541 Amir_0541 584070 584606 - hypothetical protein KEGG: tgr:Tgr7_2517 hypothetical protein gene gene557 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0541 Amir_0542 Amir_0542 Amir_0542 584603 587401 - cell divisionFtsK/SpoIIIE PFAM: cell divisionFtsK/SpoIIIE~KEGG: bpt:Bpet4245 hypothetical protein gene gene558 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0542 Amir_0543 Amir_0543 Amir_0543 587403 587654 - hypothetical protein gene gene559 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0543 Amir_0544 Amir_0544 Amir_0544 587651 587911 - hypothetical protein gene gene560 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0544 Amir_0545 Amir_0545 Amir_0545 588061 589773 - hypothetical protein KEGG: hypothetical protein gene gene561 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0545 Amir_0546 Amir_0546 Amir_0546 590316 590795 + hypothetical protein gene gene562 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0546 Amir_0547 Amir_0547 Amir_0547 590868 591659 - alpha/beta hydrolase fold protein PFAM: alpha/beta hydrolase fold~KEGG: spe:Spro_0615 alpha/beta hydrolase fold gene gene563 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0547 Amir_0548 Amir_0548 Amir_0548 591709 592527 - transcriptional regulator%2C LysR family PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: dvm:DvMF_0511 transcriptional regulator%2C LysR family gene gene564 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0548 Amir_0549 Amir_0549 Amir_0549 592602 593429 + phenazine biosynthesis protein PhzF family TIGRFAM: phenazine biosynthesis protein PhzF family~PFAM: Phenazine biosynthesis PhzC/PhzF protein~KEGG: aha:AHA_2368 putative phenazine biosynthesis protein PhzF gene gene565 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0549 Amir_0550 Amir_0550 Amir_0550 593919 594908 + transcriptional regulator%2C LysR family PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: bcm:Bcenmc03_5299 LysR family transcriptional regulator gene gene566 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0550 Amir_0551 Amir_0551 Amir_0551 594981 595796 - NmrA family protein PFAM: NmrA family protein%3B short-chain dehydrogenase/reductase SDR~KEGG: mxa:MXAN_5100 NmrA family protein gene gene567 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0551 Amir_0552 Amir_0552 Amir_0552 595883 596269 + transcriptional regulator%2C HxlR family PFAM: helix-turn-helix HxlR type~KEGG: mxa:MXAN_5099 putative transcriptional regulator gene gene568 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0552 Amir_0553 Amir_0553 Amir_0553 596361 597458 + AIG2 family protein PFAM: AIG2 family protein~KEGG: pae:PA4164 hypothetical protein gene gene569 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0553 Amir_0554 Amir_0554 Amir_0554 597634 598308 + peptidase C14%2C caspase catalytic subunit P20 KEGG: rpc:RPC_3182 peptidase C14%2C caspase catalytic subunit P20 gene gene570 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0554 Amir_0555 Amir_0555 Amir_0555 598611 600047 - hypothetical protein KEGG: hha:Hhal_1735 putative ABC transporter gene gene571 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0555 Amir_0556 Amir_0556 Amir_0556 600103 601911 - GTP-binding protein HSR1-related PFAM: GTP-binding protein HSR1-related~KEGG: scl:sce0387 hypothetical protein gene gene572 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0556 Amir_0557 Amir_0557 Amir_0557 602010 602867 - hypothetical protein KEGG: bcj:BCAS0321a hypothetical protein gene gene573 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0557 Amir_0558 Amir_0558 Amir_0558 603113 604432 + molecular chaperone-like protein KEGG: hha:Hhal_0145 heat shock protein 70 gene gene574 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0558 Amir_0559 Amir_0559 Amir_0559 604441 606807 + transcriptional regulator%2C LuxR family PFAM: regulatory protein LuxR%3B Sigma-70 region 4 type 2~SMART: regulatory protein LuxR~KEGG: ank:AnaeK_3854 tetratricopeptide TPR_2 repeat protein gene gene575 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0559 Amir_0560 Amir_0560 Amir_0560 607000 607530 - small integral membrane protein KEGG: hch:HCH_05440 small integral membrane protein gene gene576 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0560 Amir_0561 Amir_0561 Amir_0561 607655 611689 - WD-40 repeat protein PFAM: WD-40 repeat protein~SMART: WD-40 repeat protein~KEGG: scl:sce4551 protein kinase gene gene577 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0561 Amir_0562 Amir_0562 Amir_0562 612309 612665 - hypothetical protein KEGG: similar to zinc finger protein 607 gene gene578 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0562 Amir_0563 Amir_0563 Amir_0563 612716 614470 + transcriptional regulator%2C AraC family PFAM: AlkA domain protein%3B helix-turn-helix- domain containing protein AraC type~SMART: helix-turn-helix- domain containing protein AraC type~KEGG: scl:sce6205 putative regulatory protein Ada gene gene579 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0563 Amir_0564 Amir_0564 Amir_0564 614627 614773 + hypothetical protein gene gene580 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0564 Amir_0565 Amir_0565 Amir_0565 614904 615737 - protein of unknown function DUF574 PFAM: protein of unknown function DUF574~KEGG: scl:sce6070 hypothetical protein gene gene581 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0565 Amir_0566 Amir_0566 Amir_0566 615946 616830 + hypothetical protein gene gene582 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0566 Amir_0567 Amir_0567 Amir_0567 616934 617221 + protein of unknown function DUF397 PFAM: protein of unknown function DUF397 gene gene583 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0567 Amir_0568 Amir_0568 Amir_0568 617205 617510 + hypothetical protein gene gene584 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0568 Amir_0569 Amir_0569 Amir_0569 617909 619162 - membrane-bound lytic murein transglycosylase B-like protein KEGG: hypothetical LOC586091 gene gene585 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0569 Amir_0570 Amir_0570 Amir_0570 619562 625705 + conserved repeat domain protein TIGRFAM: conserved repeat domain protein%3B LPXTG- motif cell wall anchor domain protein~PFAM: Cna B domain protein%3B Pericardin like~KEGG: gme:Gmet_2043 hypothetical protein gene gene586 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0570 Amir_0571 Amir_0571 Amir_0571 625950 626150 + pseudogene gene587 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0571 Amir_0572 Amir_0572 Amir_0572 626473 631002 + YD repeat protein TIGRFAM: YD repeat protein~KEGG: rso:RS05482 putative rhs-related transmembrane protein gene gene588 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0572 Amir_0573 Amir_0573 Amir_0573 631013 631729 + hypothetical protein gene gene589 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0573 Amir_0574 Amir_0574 Amir_0574 631738 632154 + hypothetical protein gene gene590 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0574 Amir_0575 Amir_0575 Amir_0575 632186 632659 - NUDIX hydrolase PFAM: NUDIX hydrolase~KEGG: bbt:BBta_3942 putative NUDIX-like hydrolase gene gene591 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0575 Amir_0576 Amir_0576 Amir_0576 633802 636642 + transcriptional regulator%2C SARP family PFAM: transcriptional activator domain%3B Tetratricopeptide TPR_4%3B TPR repeat-containing protein%3B NB- ARC domain protein%3B transcriptional regulator domain protein%3B Tetratricopeptide TPR_2 repeat protein~SMART: Tetratricopeptide domain protein~KEGG: scl:sce5225 protein kinase gene gene592 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0576 Amir_0577 Amir_0577 Amir_0577 636814 637278 + hypothetical protein KEGG: xcv:XCV0585 hypothetical protein gene gene593 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0577 Amir_0578 Amir_0578 Amir_0578 637607 637975 + hypothetical protein gene gene594 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0578 Amir_0579 Amir_0579 Amir_0579 637962 638327 + hypothetical protein gene gene595 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0579 Amir_0580 Amir_0580 Amir_0580 638324 639445 + hypothetical protein KEGG: hypothetical protein gene gene596 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0580 Amir_0581 Amir_0581 Amir_0581 640633 641100 + conserved hypothetical protein KEGG: pca:Pcar_0786 hypothetical protein gene gene597 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0581 Amir_0582 Amir_0582 Amir_0582 641552 641809 - pseudogene gene598 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0582 Amir_0583 Amir_0583 Amir_0583 641901 642743 + transposase IS4 family protein PFAM: transposase IS4 family protein~KEGG: similar to F57G4.9 gene gene599 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0583 Amir_0584 Amir_0584 Amir_0584 642722 642826 - hypothetical protein gene gene600 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0584 Amir_0585 Amir_0585 Amir_0585 642843 643604 - transposase IS4 family protein PFAM: transposase IS4 family protein~KEGG: similar to F57G4.9 gene gene601 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0585 Amir_0586 Amir_0586 Amir_0586 643644 644723 - hypothetical protein gene gene602 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0586 Amir_0587 Amir_0587 Amir_0587 644853 645092 - pseudogene gene603 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0587 Amir_0588 Amir_0588 Amir_0588 645528 646220 + hypothetical protein KEGG: ppr:PBPRA2228 putative carboxynorspermidine decarboxylase gene gene604 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0588 Amir_0589 Amir_0589 Amir_0589 646222 648237 + hypothetical protein gene gene605 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0589 Amir_0590 Amir_0590 Amir_0590 648541 649371 - phosphoadenosine phosphosulfate reductase PFAM: phosphoadenosine phosphosulfate reductase~KEGG: swi:Swit_5329 phosphoadenosine phosphosulfate reductase gene gene606 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0590 Amir_0591 Amir_0591 Amir_0591 649368 652946 - hypothetical protein KEGG: swi:Swit_5328 hypothetical protein gene gene607 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0591 Amir_0592 Amir_0592 Amir_0592 652943 654061 - hypothetical protein KEGG: swi:Swit_5327 hypothetical protein gene gene608 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0592 Amir_0593 Amir_0593 Amir_0593 654119 655288 - aminotransferase class V PFAM: aminotransferase class V%3B aromatic amino acid beta-eliminating lyase/threonine aldolase~KEGG: afw:Anae109_1098 aminotransferase class V gene gene609 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0593 Amir_0594 Amir_0594 Amir_0594 655826 657403 + type III restriction protein res subunit PFAM: type III restriction protein res subunit%3B DEAD/DEAH box helicase domain protein%3B helicase domain protein~SMART: DEAD-like helicase%3B helicase domain protein~KEGG: nha:Nham_3708 helicase-like gene gene610 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0594 Amir_0595 Amir_0595 Amir_0595 657388 659277 + hypothetical protein KEGG: rpe:RPE_2170 hypothetical protein gene gene611 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0595 Amir_0596 Amir_0596 Amir_0596 659274 660161 + hypothetical protein KEGG: bbr:BB2173 bifunctional riboflavin kinase/FMN adenylyltransferase gene gene612 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0596 Amir_0597 Amir_0597 Amir_0597 660489 661305 + pseudogene gene613 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0597 Amir_0598 Amir_0598 Amir_0598 661424 662275 + integrase family protein PFAM: integrase family protein~KEGG: cjd:JJD26997_0344 phage integrase gene gene614 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0598 Amir_0599 Amir_0599 Amir_0599 662795 663703 + hypothetical protein gene gene616 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0599 Amir_0600 Amir_0600 Amir_0600 663901 666813 - Penicillin amidase PFAM: peptidase S45 penicillin amidase~KEGG: abc:ACICU_01963 protein related to penicillin acylase gene gene617 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0600 Amir_0601 Amir_0601 Amir_0601 667159 667806 + two component transcriptional regulator%2C LuxR family PFAM: response regulator receiver%3B regulatory protein LuxR%3B Sigma-70 region 4 type 2%3B sigma-70 region 4 domain protein~SMART: response regulator receiver%3B regulatory protein LuxR~KEGG: scl:sce5431 two-component system response regulator gene gene618 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0601 Amir_0602 Amir_0602 Amir_0602 667782 669695 - diguanylate cyclase KEGG: mgm:Mmc1_3430 diguanylate cyclase~TIGRFAM: diguanylate cyclase~PFAM: GGDEF domain containing protein~SMART: GGDEF domain containing protein gene gene619 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0602 Amir_0603 Amir_0603 Amir_0603 669772 670404 - cob(II)yrinic acid a%2Cc-diamide reductase TIGRFAM: cob(II)yrinic acid a%2Cc-diamide reductase~PFAM: nitroreductase~KEGG: ajs:Ajs_3177 cob(II)yrinic acid a%2Cc-diamide reductase gene gene620 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0603 Amir_0604 Amir_0604 Amir_0604 670501 670734 - ribosomal protein S18 TIGRFAM: ribosomal protein S18~PFAM: ribosomal protein S18~KEGG: bha:BH4048 30S ribosomal protein S18 gene gene621 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0604 Amir_0605 Amir_0605 Amir_0605 670746 671042 - ribosomal protein S14 PFAM: ribosomal protein S14~KEGG: ilo:IL1903 ribosomal protein S14 gene gene622 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0605 Amir_0606 Amir_0606 Amir_0606 671044 671211 - ribosomal protein L33 TIGRFAM: ribosomal protein L33~PFAM: ribosomal protein L33~KEGG: bpe:BP2050 50S ribosomal protein L33 gene gene623 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0606 Amir_0607 Amir_0607 Amir_0607 671211 671450 - ribosomal protein L28 TIGRFAM: ribosomal protein L28~PFAM: ribosomal protein L28~KEGG: tcx:Tcr_1918 ribosomal protein L28 gene gene624 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0607 Amir_0608 Amir_0608 Amir_0608 671544 672197 - Phosphoglycerate mutase PFAM: Phosphoglycerate mutase~KEGG: phosphoglycerate/bisphosphoglycerate mutase family protein gene gene625 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0608 Amir_0609 Amir_0609 Amir_0609 672244 672594 + Ethyl tert-butyl ether degradation EthD PFAM: Ethyl tert-butyl ether degradation EthD~KEGG: bha:BH0200 hypothetical protein gene gene626 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0609 Amir_0610 Amir_0610 Amir_0610 672591 673421 + 3-hydroxyacyl-CoA dehydrogenase NAD-binding PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding%3B 3-hydroxyacyl-CoA dehydrogenase domain protein~KEGG: scl:sce7905 hypothetical protein gene gene627 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0610 Amir_0611 Amir_0611 Amir_0611 673500 674636 + GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: mxa:MXAN_5851 acetyltransferase%2C GNAT family gene gene628 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0611 Amir_0612 Amir_0612 Amir_0612 674727 675413 + two component transcriptional regulator%2C winged helix family PFAM: response regulator receiver%3B transcriptional regulator domain protein~SMART: response regulator receiver~KEGG: sfu:Sfum_2007 two component transcriptional regulator%2C winged helix family gene gene629 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0612 Amir_0613 Amir_0613 Amir_0613 675410 676840 + histidine kinase PFAM: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B histidine kinase HAMP region domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B histidine kinase HAMP region domain protein~KEGG: sfu:Sfum_2006 integral membrane sensor signal transduction histidine kinase gene gene630 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0613 Amir_0614 Amir_0614 Amir_0614 676917 677777 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: mmw:Mmwyl1_2010 binding-protein-dependent transport systems inner membrane component gene gene631 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0614 Amir_0615 Amir_0615 Amir_0615 677774 678682 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: rle:pRL120384 putative permease component of ABC transporter gene gene632 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0615 Amir_0616 Amir_0616 Amir_0616 678688 679986 - extracellular solute-binding protein family 1 PFAM: extracellular solute-binding protein family 1~KEGG: sugar ABC transporter gene gene633 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0616 Amir_0617 Amir_0617 Amir_0617 680221 682254 + Beta-galactosidase PFAM: Glycoside hydrolase family 42 domain protein%3B Beta-galactosidase trimerisation domain protein%3B Beta-galactosidase domain protein~KEGG: bha:BH3701 beta-galactosidase gene gene634 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0617 Amir_0618 Amir_0618 Amir_0618 682257 683057 + transcriptional regulator%2C DeoR family PFAM: regulatory protein DeoR~SMART: regulatory protein DeoR~KEGG: glpRb%3B glycerol-3-phosphate transcriptional regulator protein gene gene635 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0618 Amir_0619 Amir_0619 Amir_0619 683054 684148 + galactose-1-phosphate uridylyltransferase KEGG: nmu:Nmul_A1939 galactose-1-phosphate uridylyltransferase~TIGRFAM: galactose-1-phosphate uridylyltransferase~PFAM: galactose-1-phosphate uridyl transferase domain protein gene gene636 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0619 Amir_0620 Amir_0620 Amir_0620 684324 686348 + peptidase S1 and S6 chymotrypsin/Hap PFAM: peptidase S1 and S6 chymotrypsin/Hap~SMART: PDZ/DHR/GLGF domain protein~KEGG: gox:GOX0798 serine protease gene gene637 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0620 Amir_0621 Amir_0621 Amir_0621 686531 686635 - hypothetical protein gene gene638 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0621 Amir_0622 Amir_0622 Amir_0622 686868 687368 + molybdenum cofactor synthesis domain protein TIGRFAM: molybdenum cofactor synthesis domain protein~PFAM: molybdopterin binding domain~KEGG: sfu:Sfum_0070 molybdenum cofactor synthesis domain gene gene639 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0622 Amir_0623 Amir_0623 Amir_0623 687365 687535 + hypothetical protein gene gene640 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0623 Amir_0624 Amir_0624 Amir_0624 688177 688707 - large conductance mechanosensitive channel protein TIGRFAM: large conductance mechanosensitive channel protein~PFAM: large-conductance mechanosensitive channel~KEGG: spe:Spro_4515 large-conductance mechanosensitive channel gene gene641 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0624 Amir_0625 Amir_0625 Amir_0625 689131 689706 - SAF domain protein PFAM: SAF domain protein~KEGG: dvm:DvMF_2742 Flp pilus assembly protein CpaB gene gene642 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0625 Amir_0626 Amir_0626 Amir_0626 689796 690101 - regulatory protein%2C FmdB family TIGRFAM: regulatory protein%2C FmdB family~KEGG: scl:sce1745 hypothetical protein gene gene643 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0626 Amir_0627 Amir_0627 Amir_0627 690203 690769 - 5-formyltetrahydrofolate cyclo-ligase TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase~PFAM: 5-formyltetrahydrofolate cyclo-ligase~KEGG: ade:Adeh_1046 5-formyltetrahydrofolate cyclo- ligase gene gene644 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0627 Amir_0628 Amir_0628 Amir_0628 690808 691689 + Nucleotidyl transferase PFAM: Nucleotidyl transferase~KEGG: mag:amb4451 UDP-glucose pyrophosphorylase gene gene645 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0628 Amir_0629 Amir_0629 Amir_0629 691722 692945 + molybdenum cofactor synthesis domain protein TIGRFAM: molybdenum cofactor synthesis domain protein~PFAM: MoeA domain protein domain I and II%3B MoeA domain protein domain IV%3B molybdopterin binding domain~KEGG: hha:Hhal_0242 molybdenum cofactor synthesis domain gene gene646 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0629 Amir_0630 Amir_0630 Amir_0630 692949 693608 + GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: smd:Smed_0534 GCN5-related N- acetyltransferase gene gene647 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0630 Amir_0631 Amir_0631 Amir_0631 693762 694406 + hypothetical protein gene gene648 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0631 Amir_0632 Amir_0632 Amir_0632 694897 695607 + putative transcriptional regulator%2C Crp/Fnr family PFAM: cyclic nucleotide-binding~SMART: cyclic nucleotide-binding~KEGG: nwi:Nwi_3032 Crp family transcriptional regulator gene gene650 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0632 Amir_0633 Amir_0633 Amir_0633 695634 696263 + hypothetical protein gene gene651 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0633 Amir_0634 Amir_0634 Amir_0634 696274 699279 + UvrD/REP helicase PFAM: UvrD/REP helicase~KEGG: scl:sce3530 ATP-dependent DNA helicase gene gene652 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0634 Amir_0635 Amir_0635 Amir_0635 699424 701589 + serine/threonine protein kinase PFAM: Serine/threonine protein kinase-related%3B tyrosine protein kinase%3B aminoglycoside phosphotransferase~SMART: serine/threonine protein kinase%3B tyrosine protein kinase~KEGG: mxa:MXAN_4017 serine/threonine protein kinase gene gene653 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0635 Amir_0636 Amir_0636 Amir_0636 701659 703230 - glycosyl transferase family 39 PFAM: glycosyl transferase family 39~KEGG: glycosyl transferase family 39 gene gene654 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0636 Amir_0637 Amir_0637 Amir_0637 703255 704100 + Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase~KEGG: tgr:Tgr7_0758 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase gene gene655 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0637 Amir_0638 Amir_0638 Amir_0638 704087 704491 - hypothetical protein gene gene656 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0638 Amir_0639 Amir_0639 Amir_0639 704551 705114 - hypothetical protein gene gene657 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0639 Amir_0640 Amir_0640 Amir_0640 705189 705563 - hypothetical protein gene gene658 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0640 Amir_0641 Amir_0641 Amir_0641 705567 706187 - hypothetical protein gene gene659 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0641 Amir_0642 Amir_0642 Amir_0642 706283 708073 + methionyl-tRNA synthetase TIGRFAM: methionyl-tRNA synthetase~PFAM: tRNA synthetase class I (M)~KEGG: bcr:BCAH187_A5192 putative methionyl-tRNA synthetase gene gene660 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0642 Amir_0643 Amir_0643 Amir_0643 708124 708894 + hydrolase%2C TatD family TIGRFAM: hydrolase%2C TatD family~PFAM: TatD-related deoxyribonuclease~KEGG: bcz:BCZK0035 TatD related DNase gene gene661 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0643 Amir_0644 Amir_0644 Amir_0644 709193 710614 + Transglycosylase domain protein PFAM: Transglycosylase domain protein%3B protein of unknown function DUF348%3B G5 domain protein~KEGG: bsu:BSU00400 hypothetical protein gene gene662 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0644 Amir_0645 Amir_0645 Amir_0645 710778 711674 + dimethyladenosine transferase KEGG: bha:BH0057 dimethyladenosine transferase~TIGRFAM: dimethyladenosine transferase~PFAM: ribosomal RNA adenine methylase transferase~SMART: ribosomal RNA adenine methylase transferase gene gene663 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0645 Amir_0646 Amir_0646 Amir_0646 712071 713072 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: rce:RC1_3351 ABC transporter%2C ATP-binding protein gene gene664 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0646 Amir_0647 Amir_0647 Amir_0647 713069 713752 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: vsp:VS_2383 probable D-methionine transport system permease protein MetI gene gene665 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0647 Amir_0648 Amir_0648 Amir_0648 713813 714634 + NLPA lipoprotein PFAM: NLPA lipoprotein~KEGG: pst:PSPTO_5216 NlpA family lipoprotein gene gene666 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0648 Amir_0649 Amir_0649 Amir_0649 714738 715703 + 4-diphosphocytidyl-2C-methyl-D-erythritolkinase TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase~PFAM: GHMP kinase%3B GHMP kinase domain protein~KEGG: gsu:GSU0660 4-diphosphocytidyl-2C-methyl-D- erythritol kinase gene gene667 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0649 Amir_0650 Amir_0650 Amir_0650 715722 717494 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: bcb:BCB4264_A2173 ABC transporter%2C ATP- binding protein gene gene668 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0650 Amir_0651 Amir_0651 Amir_0651 717693 719588 - hypothetical protein KEGG: WIP homolog gene gene669 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0651 Amir_0652 Amir_0652 Amir_0652 719692 721332 + AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: met:M446_2875 AMP-dependent synthetase and ligase gene gene670 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0652 Amir_0653 Amir_0653 Amir_0653 721456 722025 - peptidyl-tRNA hydrolase KEGG: mxa:MXAN_5077 peptidyl-tRNA hydrolase~TIGRFAM: peptidyl-tRNA hydrolase~PFAM: peptidyl-tRNA hydrolase gene gene671 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0653 Amir_0654 Amir_0654 Amir_0654 722015 722497 - hypothetical protein gene gene672 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0654 Amir_0655 Amir_0655 Amir_0655 722583 723176 - ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 TIGRFAM: ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5~PFAM: ribosomal protein L25~KEGG: aeh:Mlg_0284 50S ribosomal protein L25P gene gene673 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0655 Amir_0656 Amir_0656 Amir_0656 723726 724697 - ribose-phosphate pyrophosphokinase KEGG: bcu:BCAH820_0056 ribose-phosphate pyrophosphokinase~TIGRFAM: ribose-phosphate pyrophosphokinase~PFAM: phosphoribosyltransferase gene gene674 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0656 Amir_0657 Amir_0657 Amir_0657 724714 726189 - UDP-N-acetylglucosamine pyrophosphorylase TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase~PFAM: Nucleotidyl transferase%3B transferase hexapeptide repeat containing protein~KEGG: glo:Glov_0702 UDP-N-acetylglucosamine pyrophosphorylase gene gene675 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0657 Amir_0658 Amir_0658 Amir_0658 726256 727899 - diguanylate cyclase KEGG: hha:Hhal_1304 diguanylate cyclase~TIGRFAM: diguanylate cyclase~PFAM: GGDEF domain containing protein~SMART: GGDEF domain containing protein gene gene676 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0658 Amir_0659 Amir_0659 Amir_0659 728200 729366 - dipeptidylaminopeptidase/acylaminoacyl-peptidase-like protein KEGG: hne:HNE_1191 hypothetical protein gene gene678 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0659 Amir_0660 Amir_0660 Amir_0660 729521 730510 + Stearoyl-CoA 9-desaturase PFAM: fatty acid desaturase~KEGG: pfl:PFL_0262 fatty acid desaturase family proteiin gene gene679 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0660 Amir_0661 Amir_0661 Amir_0661 730614 731231 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: mxa:MXAN_5545 transcriptional regulator%2C TetR family gene gene680 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0661 Amir_0662 Amir_0662 Amir_0662 731283 731810 + conserved hypothetical protein KEGG: hypothetical protein gene gene681 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0662 Amir_0663 Amir_0663 Amir_0663 731868 732971 + glucose sorbosone dehydrogenase PFAM: glucose sorbosone dehydrogenase~KEGG: ppd:Ppro_1990 hypothetical protein gene gene682 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0663 Amir_0664 Amir_0664 Amir_0664 732955 733863 - hypothetical protein gene gene683 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0664 Amir_0665 Amir_0665 Amir_0665 734160 737723 + transcription-repair coupling factor KEGG: gsu:GSU0017 transcription-repair coupling factor~TIGRFAM: transcription-repair coupling factor~PFAM: transcription factor CarD%3B helicase domain protein%3B TRCF domain protein%3B DEAD/DEAH box helicase domain protein%3B type III restriction protein res subunit~SMART: DEAD-like helicase%3B helicase domain protein gene gene684 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0665 Amir_0666 Amir_0666 Amir_0666 737737 738678 + hypothetical protein gene gene685 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0666 Amir_0667 Amir_0667 Amir_0667 738792 739778 + MazG family protein TIGRFAM: MazG family protein~PFAM: MazG nucleotide pyrophosphohydrolase~KEGG: rce:RC1_0140 MazG family protein gene gene686 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0667 Amir_0668 Amir_0668 Amir_0668 740007 743216 + peptidase S41 PFAM: peptidase S41~SMART: peptidase S41~KEGG: swd:Swoo_3891 peptidase S41 gene gene687 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0668 Amir_0669 Amir_0669 Amir_0669 743441 744385 + membrane-bound lytic murein transglycosylase B-like protein KEGG: scl:sce1066 hypothetical protein gene gene688 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0669 Amir_0670 Amir_0670 Amir_0670 744530 744913 - TPR repeat-containing protein PFAM: TPR repeat-containing protein~SMART: Tetratricopeptide domain protein~KEGG: azc:AZC_2926 TPR repeat-containing protein gene gene689 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0670 Amir_0671 Amir_0671 Amir_0671 745109 746395 + enolase KEGG: nar:Saro_2223 enolase~TIGRFAM: enolase~PFAM: enolase gene gene690 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0671 Amir_0672 Amir_0672 Amir_0672 746791 747156 + Septum formation initiator PFAM: Septum formation initiator gene gene691 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0672 Amir_0673 Amir_0673 Amir_0673 747153 747650 + protein of unknown function DUF501 PFAM: protein of unknown function DUF501~KEGG: csa:Csal_3040 hypothetical protein gene gene692 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0673 Amir_0674 Amir_0674 Amir_0674 747861 749165 + membrane-bound lytic murein transglycosylase B-like protein KEGG: GI22470 gene product from transcript GI22470- RA gene gene693 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0674 Amir_0675 Amir_0675 Amir_0675 749617 750579 + Ppx/GppA phosphatase PFAM: Ppx/GppA phosphatase~KEGG: scl:sce1705 hypothetical protein gene gene694 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0675 Amir_0676 Amir_0676 Amir_0676 750779 752404 + 4-phytase PFAM: extracellular solute-binding protein family 5~KEGG: bsu:BSU11430 oligopeptide ABC transporter (binding protein) gene gene695 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0676 Amir_0677 Amir_0677 Amir_0677 752475 753401 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: dde:Dde_1184 dipeptide ABC transporter%2C permease protein gene gene696 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0677 Amir_0678 Amir_0678 Amir_0678 753394 754317 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: bpt:Bpet2850 ABC transporter inner membrane protein gene gene697 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0678 Amir_0679 Amir_0679 Amir_0679 754330 755313 + oligopeptide/dipeptide ABC transporter%2C ATPase subunit KEGG: mrd:Mrad2831_4369 oligopeptide/dipeptide ABC transporter%2C ATPase subunit~TIGRFAM: oligopeptide/dipeptide ABC transporter%2C ATPase subunit~PFAM: ABC transporter related%3B Oligopeptide/dipeptide ABC transporter domain protein~SMART: AAA ATPase gene gene698 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0679 Amir_0680 Amir_0680 Amir_0680 755306 756304 + oligopeptide/dipeptide ABC transporter%2C ATPase subunit KEGG: bbt:BBta_6951 oligopeptide ABC transporter ATP-binding protein~TIGRFAM: oligopeptide/dipeptide ABC transporter%2C ATPase subunit~PFAM: ABC transporter related%3B Oligopeptide/dipeptide ABC transporter domain protein~SMART: AAA ATPase gene gene699 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0680 Amir_0681 Amir_0681 Amir_0681 756356 757837 - peptidase S10 serine carboxypeptidase PFAM: peptidase S10 serine carboxypeptidase~KEGG: gur:Gura_2114 peptidase S10%2C serine carboxypeptidase gene gene700 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0681 Amir_0682 Amir_0682 Amir_0682 757874 758704 + Uracil-DNA glycosylase superfamily PFAM: Uracil-DNA glycosylase superfamily~KEGG: ank:AnaeK_3689 uracil-DNA glycosylase superfamily protein gene gene701 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0682 Amir_0683 Amir_0683 Amir_0683 758848 759519 + hypothetical protein KEGG: gur:Gura_0189 transglutaminase domain- containing protein gene gene702 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0683 Amir_0684 Amir_0684 Amir_0684 759516 759977 + hypothetical protein gene gene703 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0684 Amir_0685 Amir_0685 Amir_0685 759974 760927 + ATPase associated with various cellular activities AAA_3 PFAM: ATPase associated with various cellular activities AAA_3%3B ATPase associated with various cellular activities AAA_5~KEGG: sml:Smlt4485 putative ATPase gene gene704 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0685 Amir_0686 Amir_0686 Amir_0686 760924 762228 + protein of unknown function DUF58 PFAM: protein of unknown function DUF58~KEGG: mmr:Mmar10_2677 hypothetical protein gene gene705 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0686 Amir_0687 Amir_0687 Amir_0687 762265 763008 + hypothetical protein KEGG: GK24882 gene product from transcript GK24882- RA gene gene706 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0687 Amir_0688 Amir_0688 Amir_0688 763157 764482 + FAD-dependent pyridine nucleotide-disulphide oxidoreductase PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase%3B FAD dependent oxidoreductase~KEGG: rsh:Rsph17029_3442 cyclic nucleotide- regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase gene gene707 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0688 Amir_0689 Amir_0689 Amir_0689 764710 764832 + hypothetical protein gene gene708 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0689 Amir_0690 Amir_0690 Amir_0690 764862 766781 + hypothetical protein KEGG: hypothetical protein gene gene709 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0690 Amir_0691 Amir_0691 Amir_0691 766762 767832 + nitroreductase PFAM: nitroreductase~KEGG: bcz:pE33L466_0413 NADH oxidase gene gene710 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0691 Amir_0692 Amir_0692 Amir_0692 768231 769874 - protein of unknown function DUF885 PFAM: protein of unknown function DUF885~KEGG: nar:Saro_2356 hypothetical protein gene gene712 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0692 Amir_0693 Amir_0693 Amir_0693 770041 770664 + conserved hypothetical protein KEGG: bid:Bind_2941 hypothetical protein gene gene713 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0693 Amir_0694 Amir_0694 Amir_0694 770728 771897 - hypothetical protein KEGG: scl:sce7515 hypothetical protein gene gene714 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0694 Amir_0695 Amir_0695 Amir_0695 771975 772661 - peptidase C60 sortase A and B PFAM: peptidase C60 sortase A and B gene gene715 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0695 Amir_0696 Amir_0696 Amir_0696 772688 774055 - hypothetical protein KEGG: bmn:BMA10247_0315 putative cell division protein FtsK gene gene716 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0696 Amir_0697 Amir_0697 Amir_0697 774333 775142 + protein of unknown function DUF1112 PFAM: protein of unknown function DUF1112~KEGG: xfa:XF2760 hypothetical protein gene gene717 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0697 Amir_0698 Amir_0698 Amir_0698 775325 775558 - hypothetical protein gene gene718 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0698 Amir_0699 Amir_0699 Amir_0699 775719 776939 - acetyl-CoA acetyltransferase KEGG: aba:Acid345_2470 3-ketoacyl-CoA thiolase~TIGRFAM: acetyl-CoA acetyltransferase~PFAM: Thiolase gene gene719 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0699 Amir_0700 Amir_0700 Amir_0700 777141 778511 + cystathionine beta-synthase KEGG: afw:Anae109_3846 pyridoxal-5'-phosphate- dependent protein beta subunit~TIGRFAM: cystathionine beta-synthase~PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit%3B CBS domain containing protein~SMART: CBS domain containing protein gene gene720 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0700 Amir_0701 Amir_0701 Amir_0701 778707 779828 + RDD domain containing protein PFAM: RDD domain containing protein~KEGG: GI11778 gene product from transcript GI11778- RA gene gene721 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0701 Amir_0702 Amir_0702 Amir_0702 780021 781172 + Cystathionine gamma-synthase PFAM: Cys/Met metabolism pyridoxal-phosphate- dependent protein%3B aromatic amino acid beta-eliminating lyase/threonine aldolase~KEGG: afw:Anae109_3845 cystathionine gamma-lyase gene gene722 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0702 Amir_0703 Amir_0703 Amir_0703 781277 781549 - conserved hypothetical protein KEGG: scl:sce7470 hypothetical protein gene gene723 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0703 Amir_0704 Amir_0704 Amir_0704 781577 781801 - hypothetical protein gene gene724 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0704 Amir_0705 Amir_0705 Amir_0705 781935 783116 - 4-hydroxyphenylpyruvate dioxygenase KEGG: bcy:Bcer98_0228 4-hydroxyphenylpyruvate dioxygenase~TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase~PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase gene gene725 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0705 Amir_0706 Amir_0706 Amir_0706 783192 783713 + transcriptional regulator%2C AsnC family PFAM: regulatory protein AsnC/Lrp family~SMART: regulatory protein AsnC/Lrp family~KEGG: ppg:PputGB1_0412 AsnC family transcriptional regulator gene gene726 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0706 Amir_0707 Amir_0707 Amir_0707 783930 784418 - transcription elongation factor GreA TIGRFAM: transcription elongation factor GreA~PFAM: transcription elongation factor GreA/GreB domain protein~KEGG: wol:WD0654 transcription elongation factor GreA gene gene727 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0707 Amir_0708 Amir_0708 Amir_0708 784632 785051 - hypothetical protein gene gene728 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0708 Amir_0709 Amir_0709 Amir_0709 785161 786042 + mycothiol conjugate amidase Mca TIGRFAM: mycothiol conjugate amidase Mca~PFAM: LmbE family protein~KEGG: aba:Acid345_2880 LmbE-like protein gene gene729 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0709 Amir_0710 Amir_0710 Amir_0710 786039 786398 + hypothetical protein KEGG: SAT2%3B serine O-acetyl transferase%3B K00640 serine O-acetyltransferase gene gene730 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0710 Amir_0711 Amir_0711 Amir_0711 786435 786995 - protein of unknown function DUF1526 PFAM: protein of unknown function DUF1526~KEGG: rru:Rru_A1986 hypothetical protein gene gene731 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0711 Amir_0712 Amir_0712 Amir_0712 787541 789514 + protein of unknown function DUF255 PFAM: protein of unknown function DUF255~KEGG: xau:Xaut_1832 hypothetical protein gene gene732 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0712 Amir_0713 Amir_0713 Amir_0713 789566 790243 - channel protein%2C hemolysin III family TIGRFAM: channel protein%2C hemolysin III family~PFAM: Hly-III family protein~KEGG: afw:Anae109_1200 hemolysin III family channel protein gene gene733 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0713 Amir_0714 Amir_0714 Amir_0714 790326 791105 + undecaprenyl diphosphate synthase KEGG: bcj:BCAM2067 putative undecaprenyl pyrophosphate synthetase~TIGRFAM: undecaprenyl diphosphate synthase~PFAM: Di-trans-poly-cis-decaprenylcistransferase gene gene734 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0714 Amir_0715 Amir_0715 Amir_0715 791335 791661 - outer membrane protein A precursor (190 kDa antigen) KEGG: abb:ABBFA_000474 outer membrane protein A precursor (190 kDa antigen) gene gene735 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0715 Amir_0716 Amir_0716 Amir_0716 791836 793074 + conserved hypothetical protein KEGG: sal:Sala_0599 hypothetical protein gene gene736 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0716 Amir_0717 Amir_0717 Amir_0717 793447 794823 + PhoH family protein PFAM: PhoH family protein~SMART: Nucleotide binding protein PINc~KEGG: dal:Dalk_3397 PhoH family protein gene gene737 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0717 Amir_0718 Amir_0718 Amir_0718 794926 796359 - IMP dehydrogenase family protein KEGG: afw:Anae109_3133 inositol-5-monophosphate dehydrogenase~TIGRFAM: IMP dehydrogenase family protein~PFAM: IMP dehydrogenase/GMP reductase%3B CBS domain containing protein~SMART: CBS domain containing protein gene gene738 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0718 Amir_0719 Amir_0719 Amir_0719 796372 797985 - DNA ligase I%2C ATP-dependent Dnl1 KEGG: afw:Anae109_4301 ATP-dependent DNA ligase~TIGRFAM: DNA ligase I%2C ATP-dependent Dnl1~PFAM: ATP dependent DNA ligase%3B DNA ligase domain protein%3B ATP dependent DNA ligase domain protein gene gene739 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0719 Amir_0720 Amir_0720 Amir_0720 798086 799480 - fumarate lyase PFAM: fumarate lyase~KEGG: xca:xccb100_2779 fumarate hydratase gene gene740 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0720 Amir_0721 Amir_0721 Amir_0721 799546 800517 + FAD-dependent pyridine nucleotide-disulphide oxidoreductase PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase~KEGG: bha:BH3408 thioredoxin reductase gene gene741 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0721 Amir_0722 Amir_0722 Amir_0722 800609 801043 - ErfK/YbiS/YcfS/YnhG family protein PFAM: ErfK/YbiS/YcfS/YnhG family protein~KEGG: xca:xccb100_2984 hypothetical protein gene gene742 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0722 Amir_0723 Amir_0723 Amir_0723 801210 801974 - peptidase S1 and S6 chymotrypsin/Hap PFAM: peptidase S1 and S6 chymotrypsin/Hap~SMART: peptidase S1 and S6 chymotrypsin/Hap~KEGG: hypothetical protein gene gene743 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0723 Amir_0724 Amir_0724 Amir_0724 802130 803182 - fructose-1%2C6-bisphosphatase%2C class II TIGRFAM: fructose-1%2C6-bisphosphatase%2C class II~PFAM: GlpX family protein~KEGG: dvm:DvMF_0188 fructose-1%2C6-bisphosphatase%2C class II gene gene744 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0724 Amir_0725 Amir_0725 Amir_0725 803231 803440 - exodeoxyribonuclease VII%2C small subunit TIGRFAM: exodeoxyribonuclease VII%2C small subunit~PFAM: Exonuclease VII small subunit~KEGG: AGAP012846-PA gene gene745 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0725 Amir_0726 Amir_0726 Amir_0726 803437 803847 - conserved hypothetical protein KEGG: scl:sce2186 hypothetical protein gene gene746 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0726 Amir_0727 Amir_0727 Amir_0727 803828 805090 - exodeoxyribonuclease VII%2C large subunit KEGG: hha:Hhal_1683 exodeoxyribonuclease VII%2C large subunit~TIGRFAM: exodeoxyribonuclease VII%2C large subunit~PFAM: Exonuclease VII large subunit%3B nucleic acid binding OB-fold tRNA/helicase-type gene gene747 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0727 Amir_0728 Amir_0728 Amir_0728 805087 805716 - hypothetical protein KEGG: GM22731 gene product from transcript GM22731- RA gene gene748 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0728 Amir_0729 Amir_0729 Amir_0729 805781 806725 + hydroxymethylbutenyl pyrophosphate reductase KEGG: nmn:NMCC_0391 4-hydroxy-3-methylbut-2-enyl diphosphate reductase~TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase~PFAM: LytB protein gene gene749 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0729 Amir_0730 Amir_0730 Amir_0730 807024 807767 - hypothetical protein KEGG: DNA helicase (SGS1 homologue)%3B K03654 ATP- dependent DNA helicase RecQ gene gene750 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0730 Amir_0731 Amir_0731 Amir_0731 807869 808810 - protein of unknown function DUF195 PFAM: protein of unknown function DUF195~KEGG: afw:Anae109_0527 hypothetical protein gene gene751 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0731 Amir_0732 Amir_0732 Amir_0732 808913 810061 + nuclease SbcCD%2C D subunit TIGRFAM: nuclease SbcCD%2C D subunit~PFAM: metallophosphoesterase~KEGG: afw:Anae109_2145 nuclease SbcCD%2C D subunit gene gene752 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0732 Amir_0733 Amir_0733 Amir_0733 810058 812946 + DNA repair exonuclease%2C SbcC KEGG: afw:Anae109_2144 DNA repair exonuclease%2C SbcC gene gene753 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0733 Amir_0734 Amir_0734 Amir_0734 812974 813468 - methylated-DNA/protein-cysteinemethyltransferase TIGRFAM: methylated-DNA/protein-cysteine methyltransferase~PFAM: Methylated-DNA-[protein]-cysteine S- methyltransferase DNA binding~KEGG: sus:Acid_4002 methylated-DNA--protein- cysteine methyltransferase gene gene754 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0734 Amir_0735 Amir_0735 Amir_0735 813465 814790 - transcriptional regulator%2C AraC family KEGG: scl:sce6205 putative regulatory protein Ada~PFAM: AlkA domain protein%3B Ada metal-binding domain protein%3B helix-turn-helix- domain containing protein AraC type~SMART: helix-turn-helix- domain containing protein AraC type gene gene755 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0735 Amir_0736 Amir_0736 Amir_0736 814869 815948 + GTP-binding protein YchF TIGRFAM: GTP-binding protein YchF~PFAM: Protein of unknown function DUF933%3B GTP- binding protein HSR1-related~KEGG: nmc:NMC0379 translation-associated GTPase gene gene756 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0736 Amir_0737 Amir_0737 Amir_0737 816499 816972 + hypothetical protein gene gene757 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0737 Amir_0738 Amir_0738 Amir_0738 816990 817316 + hypothetical protein gene gene758 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0738 Amir_0739 Amir_0739 Amir_0739 817485 818147 - hypothetical protein KEGG: hypothetical protein gene gene759 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0739 Amir_0740 Amir_0740 Amir_0740 818390 818743 - hypothetical protein gene gene760 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0740 Amir_0741 Amir_0741 Amir_0741 818803 819153 - hypothetical protein gene gene761 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0741 Amir_0742 Amir_0742 Amir_0742 819606 819710 - hypothetical protein gene gene762 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0742 Amir_0743 Amir_0743 Amir_0743 819816 821012 + hypothetical protein KEGG: hne:HNE_2077 hypothetical protein gene gene763 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0743 Amir_0744 Amir_0744 Amir_0744 821046 821204 + pseudogene gene764 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0744 Amir_0745 Amir_0745 Amir_0745 821250 821543 - transcriptional coactivator/pterin dehydratase PFAM: transcriptional coactivator/pterin dehydratase~KEGG: mxa:MXAN_6773 putative pterin-4-alpha- carbinolamine dehydratase gene gene765 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0745 Amir_0746 Amir_0746 Amir_0746 821679 822713 + ABC transporter%2C periplasmic binding protein%2C thiB subfamily TIGRFAM: ABC transporter%2C periplasmic binding protein%2C thiB subfamily~PFAM: extracellular solute-binding protein family 1~KEGG: cvi:CV_3164 thiamin-binding periplasmic protein gene gene766 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0746 Amir_0747 Amir_0747 Amir_0747 822803 824446 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: rfr:Rfer_3245 binding-protein-dependent transport systems inner membrane component gene gene767 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0747 Amir_0748 Amir_0748 Amir_0748 824446 825447 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: bra:BRADO7092 spermidine/putrescine ABC transporter ATP-binding protein gene gene768 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0748 Amir_0749 Amir_0749 Amir_0749 825493 826359 - hypothetical protein KEGG: aeh:Mlg_1077 ABC-type transport system involved in multi-copper enzyme maturation%2C permease component gene gene769 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0749 Amir_0750 Amir_0750 Amir_0750 826356 829865 - hypothetical protein KEGG: proteophosphoglycan 5 gene gene770 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0750 Amir_0751 Amir_0751 Amir_0751 829862 830890 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: bha:BH0445 ABC transporter ATP-binding protein gene gene771 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0751 Amir_0752 Amir_0752 Amir_0752 830887 832089 - hypothetical protein KEGG: pau:PA14_50860 hypothetical protein gene gene772 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0752 Amir_0753 Amir_0753 Amir_0753 832249 832974 + two component transcriptional regulator%2C winged helix family PFAM: response regulator receiver%3B transcriptional regulator domain protein~SMART: response regulator receiver~KEGG: met:M446_6140 two component transcriptional regulator gene gene773 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0753 Amir_0754 Amir_0754 Amir_0754 832971 834254 + histidine kinase PFAM: ATP-binding region ATPase domain protein%3B histidine kinase HAMP region domain protein%3B histidine kinase A domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein~KEGG: gbm:Gbem_2673 heavy metal sensor signal transduction histidine kinase gene gene774 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0754 Amir_0755 Amir_0755 Amir_0755 834452 835255 + NUDIX hydrolase PFAM: NUDIX hydrolase~KEGG: scl:sce8529 Nudix/MutT family protein gene gene775 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0755 Amir_0756 Amir_0756 Amir_0756 835671 836636 - tryptophanyl-tRNA synthetase KEGG: hsm:HSM_0044 tryptophanyl-tRNA synthetase~TIGRFAM: tryptophanyl-tRNA synthetase~PFAM: aminoacyl-tRNA synthetase class Ib gene gene776 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0756 Amir_0757 Amir_0757 Amir_0757 836836 837138 + YCII-related protein PFAM: YCII-related~KEGG: bpy:Bphyt_0556 YCII-related gene gene777 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0757 Amir_0758 Amir_0758 Amir_0758 837484 837645 - hypothetical protein gene gene778 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0758 Amir_0759 Amir_0759 Amir_0759 837810 839711 + GTP-binding protein TypA TIGRFAM: GTP-binding protein TypA%3B small GTP- binding protein~PFAM: protein synthesis factor GTP-binding%3B elongation factor G domain protein%3B elongation factor Tu domain 2 protein~KEGG: aba:Acid345_4404 GTP-binding protein TypA gene gene779 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0759 Amir_0760 Amir_0760 Amir_0760 839987 841687 + extracellular solute-binding protein family 5 PFAM: extracellular solute-binding protein family 5~KEGG: mes:Meso_1835 extracellular solute-binding protein%2C family 5 gene gene780 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0760 Amir_0761 Amir_0761 Amir_0761 841988 843802 + extracellular solute-binding protein family 5 PFAM: extracellular solute-binding protein family 5~KEGG: mes:Meso_1835 extracellular solute-binding protein%2C family 5 gene gene781 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0761 Amir_0762 Amir_0762 Amir_0762 843963 844961 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: mes:Meso_1834 binding-protein-dependent transport systems inner membrane component gene gene782 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0762 Amir_0763 Amir_0763 Amir_0763 844963 845901 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: mes:Meso_1833 binding-protein-dependent transport systems inner membrane component gene gene783 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0763 Amir_0764 Amir_0764 Amir_0764 845898 847076 + oligopeptide/dipeptide ABC transporter%2C ATPase subunit KEGG: bcs:BCAN_B1102 oligopeptide/dipeptide ABC transporter ATP-binding protein~TIGRFAM: oligopeptide/dipeptide ABC transporter%2C ATPase subunit~PFAM: ABC transporter related%3B Oligopeptide/dipeptide ABC transporter domain protein~SMART: AAA ATPase gene gene784 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0764 Amir_0765 Amir_0765 Amir_0765 847073 848122 + oligopeptide/dipeptide ABC transporter%2C ATPase subunit KEGG: bra:BRADO1097 oligopeptide ABC transporter ATP-binding protein~TIGRFAM: oligopeptide/dipeptide ABC transporter%2C ATPase subunit~PFAM: ABC transporter related%3B Oligopeptide/dipeptide ABC transporter domain protein~SMART: AAA ATPase gene gene785 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0765 Amir_0766 Amir_0766 Amir_0766 848250 849101 + 1D-myo-inosityl-2-acetamido-2-deoxy-alpha-D-gluc opyranosidedeacetylase TIGRFAM:1D-myo-inosityl-2-acetamido-2-deoxy-alpha-D- glucopyranosidedeacetylase~PFAM: LmbE family protein~KEGG: aba:Acid345_2880 LmbE-like protein gene gene786 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0766 Amir_0767 Amir_0767 Amir_0767 849200 849580 + hypothetical protein gene gene787 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0767 Amir_0768 Amir_0768 Amir_0768 849761 850825 + hypothetical protein KEGG: met:M446_5119 flagellar hook-length control protein gene gene788 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0768 Amir_0769 Amir_0769 Amir_0769 850804 851637 - GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: ccs:CCNA_02292 acetyltransferase gene gene789 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0769 Amir_0770 Amir_0770 Amir_0770 851796 852122 + 4Fe-4S ferredoxin iron-sulfur binding domain protein PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein~KEGG: vei:Veis_3502 4Fe-4S ferredoxin%2C iron-sulfur binding domain protein gene gene790 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0770 Amir_0771 Amir_0771 Amir_0771 852119 853210 + aminotransferase class I and II PFAM: aminotransferase class I and II~KEGG: afw:Anae109_3944 aminotransferase class I and II gene gene791 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0771 Amir_0772 Amir_0772 Amir_0772 853292 854266 - 2%2C3%2C4%2C5-tetrahydropyridine-2-carboxylateN-succin yltransferase KEGG: vch:VC2329 2%2C3%2C4%2C5-tetrahydropyridine-2- carboxylate N-succinyltransferase gene gene792 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0772 Amir_0773 Amir_0773 Amir_0773 854283 855362 + succinyl-diaminopimelate desuccinylase TIGRFAM: succinyl-diaminopimelate desuccinylase~PFAM: peptidase M20%3B peptidase dimerization domain protein~KEGG: ank:AnaeK_3891 peptidase M20 gene gene793 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0773 Amir_0774 Amir_0774 Amir_0774 855382 856149 + conserved hypothetical protein PFAM: conserved hypothetical protein~KEGG: hypothetical protein gene gene794 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0774 Amir_0775 Amir_0775 Amir_0775 856149 856691 + conserved hypothetical protein PFAM: conserved hypothetical protein~KEGG: mpt:Mpe_A2111 hypothetical protein gene gene795 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0775 Amir_0776 Amir_0776 Amir_0776 856763 858316 - peptidase S15 PFAM: peptidase S15%3B X-Pro dipeptidyl-peptidase domain protein%3B Acetyl xylan esterase~KEGG: sml:Smlt2609 putative X-Pro dipeptidyl- peptidase protein gene gene796 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0776 Amir_0777 Amir_0777 Amir_0777 858410 859270 + dihydropteroate synthase KEGG: ade:Adeh_1496 dihydropteroate synthase~TIGRFAM: dihydropteroate synthase~PFAM: dihydropteroate synthase DHPS gene gene797 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0777 Amir_0778 Amir_0778 Amir_0778 859337 859684 + transcriptional regulator%2C PadR-like family PFAM: transcriptional regulator PadR family protein~KEGG: aba:Acid345_4626 transcriptional regulator%2C PadR family gene gene798 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0778 Amir_0779 Amir_0779 Amir_0779 859772 860347 + hypothetical protein KEGG: GD17417 gene product from transcript GD17417- RA gene gene799 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0779 Amir_0780 Amir_0780 Amir_0780 860334 860765 + hypothetical protein gene gene800 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0780 Amir_0781 Amir_0781 Amir_0781 860768 861346 + DNA-3-methyladenine glycosylase I KEGG: tmz:Tmz1t_2227 DNA-3-methyladenine glycosylase I~TIGRFAM: DNA-3-methyladenine glycosylase I~PFAM: methyladenine glycosylase gene gene801 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0781 Amir_0782 Amir_0782 Amir_0782 861347 862234 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: ccs:CCNA_02424 transcriptional regulator%2C TetR family gene gene802 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0782 Amir_0783 Amir_0783 Amir_0783 862339 863382 + Alcohol dehydrogenase zinc-binding domain protein PFAM: Alcohol dehydrogenase zinc-binding domain protein%3B Alcohol dehydrogenase GroES domain protein~KEGG: bph:Bphy_2359 alcohol dehydrogenase gene gene803 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0783 Amir_0784 Amir_0784 Amir_0784 863379 863972 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: cak:Caul_3929 TetR family transcriptional regulator gene gene804 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0784 Amir_0785 Amir_0785 Amir_0785 864008 864613 + binding-protein-dependent transport systems inner membrane component KEGG: met:M446_0017 binding-protein-dependent transport systems inner membrane component gene gene805 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0785 Amir_0786 Amir_0786 Amir_0786 864738 865520 - Enoyl-CoA hydratase/isomerase PFAM: Enoyl-CoA hydratase/isomerase~KEGG: dac:Daci_0568 enoyl-CoA hydratase/isomerase gene gene806 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0786 Amir_0787 Amir_0787 Amir_0787 865668 866474 - transcriptional regulator%2C PaaX family PFAM: PaaX domain protein domain%3B PaaX domain protein~KEGG: bha:BH0194 repressor in the phenylacetic acid catabolic pathway gene gene807 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0787 Amir_0788 Amir_0788 Amir_0788 866738 866905 + hypothetical protein gene gene808 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0788 Amir_0789 Amir_0789 Amir_0789 867012 868379 + Leucyl aminopeptidase PFAM: peptidase M17 leucyl aminopeptidase domain protein~KEGG: rce:RC1_1566 leucyl aminopeptidase PepA%2C putative gene gene809 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0789 Amir_0790 Amir_0790 Amir_0790 868404 869489 - transcriptional regulator%2C LysR family PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: bsu:BSU40670 hypothetical protein gene gene810 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0790 Amir_0791 Amir_0791 Amir_0791 869516 870820 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: acr:Acry_1491 major facilitator transporter gene gene811 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0791 Amir_0792 Amir_0792 Amir_0792 870972 872031 - pseudogene gene812 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0792 Amir_0793 Amir_0793 Amir_0793 872197 873384 - glycogen synthase TIGRFAM: glycogen synthase~PFAM: glycosyl transferase group 1~KEGG: bmj:BMULJ_06045 putative glycosyltransferase gene gene813 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0793 Amir_0794 Amir_0794 Amir_0794 873475 874695 + glucose-1-phosphate adenylyltransferase TIGRFAM: glucose-1-phosphate adenylyltransferase~PFAM: Nucleotidyl transferase~KEGG: mxa:MXAN_1524 glucose-1-phosphate adenylyltransferase gene gene814 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0794 Amir_0795 Amir_0795 Amir_0795 875108 875692 + RNA polymerase%2C sigma-24 subunit%2C ECF subfamily TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family~PFAM: sigma-70 region 2 domain protein%3B Sigma-70 region 4 type 2%3B sigma-70 region 4 domain protein~KEGG: sus:Acid_0793 ECF subfamily RNA polymerase sigma-24 factor gene gene815 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0795 Amir_0796 Amir_0796 Amir_0796 875689 876336 + putative transmembrane anti-sigma factor KEGG: similar to sperm associated antigen 8 isoform 2 gene gene816 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0796 Amir_0797 Amir_0797 Amir_0797 876404 877942 + peptidase S1 and S6 chymotrypsin/Hap PFAM: peptidase S1 and S6 chymotrypsin/Hap%3B PDZ/DHR/GLGF domain protein~SMART: PDZ/DHR/GLGF domain protein~KEGG: rfr:Rfer_2959 peptidase S1 and S6%2C chymotrypsin/Hap gene gene817 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0797 Amir_0798 Amir_0798 Amir_0798 878054 878443 + twin-arginine translocation protein%2C TatB subunit TIGRFAM: twin-arginine translocation protein%2C TatB subunit~PFAM: sec-independent translocation protein mttA/Hcf106~KEGG: pst:PSPTO_5156 sec-independent translocase gene gene818 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0798 Amir_0799 Amir_0799 Amir_0799 878625 879770 - protein of unknown function DUF59 PFAM: protein of unknown function DUF59~KEGG: bcr:BCAH187_A3588 mrp protein gene gene819 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0799 Amir_0800 Amir_0800 Amir_0800 879919 880422 + transcriptional regulator%2C MarR family PFAM: regulatory protein MarR~SMART: regulatory protein MarR~KEGG: pst:PSPTO_3861 MarR family transcriptional regulator gene gene820 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0800 Amir_0801 Amir_0801 Amir_0801 880438 881028 - protein of unknown function DUF1003 PFAM: protein of unknown function DUF1003~KEGG: ppf:Pput_1917 hypothetical protein gene gene821 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0801 Amir_0802 Amir_0802 Amir_0802 881021 882271 - MgtE intracellular region PFAM: MgtE intracellular region%3B CBS domain containing protein~SMART: CBS domain containing protein~KEGG: gur:Gura_2041 MgtE intracellular region gene gene822 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0802 Amir_0803 Amir_0803 Amir_0803 882299 883156 - aminoglycoside/hydroxyurea antibiotic resistance kinase PFAM: aminoglycoside/hydroxyurea antibiotic resistance kinase~KEGG: pap:PSPA7_3432 streptomycin 3''-kinase (streptomycin 3''-phosphotransferase) (SPH) gene gene823 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0803 Amir_0804 Amir_0804 Amir_0804 883153 883473 - hypothetical protein gene gene824 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0804 Amir_0805 Amir_0805 Amir_0805 883598 884557 + Citrate (pro-3S)-lyase PFAM: HpcH/HpaI aldolase~KEGG: sil:SPO1565 citrate lyase%2C putative gene gene825 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0805 Amir_0806 Amir_0806 Amir_0806 884815 885354 + hypothetical protein KEGG: har:HEAR2359 putative permease gene gene826 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0806 Amir_0807 Amir_0807 Amir_0807 885780 887042 + extracellular solute-binding protein family 1 PFAM: extracellular solute-binding protein family 1~KEGG: noc:Noc_0282 extracellular solute-binding protein gene gene827 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0807 Amir_0808 Amir_0808 Amir_0808 887039 887995 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: noc:Noc_0281 ABC transporter%2C inner membrane subunit gene gene828 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0808 Amir_0809 Amir_0809 Amir_0809 887995 888840 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: noc:Noc_0280 ABC transporter%2C inner membrane subunit gene gene829 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0809 Amir_0810 Amir_0810 Amir_0810 888841 890031 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: noc:Noc_0279 ABC transporter%2C ATPase subunit gene gene830 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0810 Amir_0811 Amir_0811 Amir_0811 890368 891258 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: rpb:RPB_3589 short-chain dehydrogenase/reductase SDR gene gene831 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0811 Amir_0812 Amir_0812 Amir_0812 891313 892278 + hypothetical protein gene gene832 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0812 Amir_0813 Amir_0813 Amir_0813 892336 892941 + transcriptional regulator%2C PadR-like family PFAM: transcriptional regulator PadR family protein~KEGG: bmj:BMULJ_03145 PadR-like family transcriptional regulator gene gene833 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0813 Amir_0814 Amir_0814 Amir_0814 893043 894131 + conserved hypothetical protein KEGG: mno:Mnod_7454 hypothetical protein gene gene834 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0814 Amir_0815 Amir_0815 Amir_0815 894210 894305 - hypothetical protein gene gene835 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0815 Amir_0816 Amir_0816 Amir_0816 894345 895448 - magnesium and cobalt transport protein CorA TIGRFAM: magnesium and cobalt transport protein CorA~PFAM: Mg2 transporter protein CorA family protein~KEGG: reh:H16_A0087 putative Mg2+ and Co2+ transporter gene gene836 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0816 Amir_0817 Amir_0817 Amir_0817 895981 897048 + conserved hypothetical protein KEGG: sil:SPO0916 hypothetical protein gene gene837 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0817 Amir_0818 Amir_0818 Amir_0818 897890 898048 + hypothetical protein gene gene838 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0818 Amir_0819 Amir_0819 Amir_0819 898098 898658 + membrane-flanked domain protein PFAM: membrane-flanked domain~KEGG: acr:Acry_0579 membrane-flanked domain- containing protein gene gene839 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0819 Amir_0820 Amir_0820 Amir_0820 898676 899533 + PHP domain protein PFAM: PHP domain protein~SMART: phosphoesterase PHP domain protein~KEGG: mxa:MXAN_2739 hypothetical protein gene gene840 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0820 Amir_0821 Amir_0821 Amir_0821 899938 900777 + hypothetical protein KEGG: mxa:MXAN_1877 hypothetical protein gene gene841 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0821 Amir_0822 Amir_0822 Amir_0822 901612 902448 - alpha/beta hydrolase fold protein PFAM: alpha/beta hydrolase fold~KEGG: met:M446_0531 alpha/beta hydrolase fold gene gene842 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0822 Amir_0823 Amir_0823 Amir_0823 902513 903991 - hypothetical protein KEGG: dno:DNO_0690 hypothetical protein gene gene843 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0823 Amir_0824 Amir_0824 Amir_0824 904032 905861 - DEAD/DEAH box helicase domain protein PFAM: DEAD/DEAH box helicase domain protein%3B helicase domain protein~SMART: DEAD-like helicase%3B helicase domain protein~KEGG: rle:RL3597 putative DEAD box ATP-dependent RNA helicase protein gene gene844 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0824 Amir_0825 Amir_0825 Amir_0825 906189 906866 + hypothetical protein gene gene845 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0825 Amir_0826 Amir_0826 Amir_0826 906909 907136 + hypothetical protein gene gene846 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0826 Amir_0827 Amir_0827 Amir_0827 907308 907700 - hypothetical protein gene gene847 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0827 Amir_0828 Amir_0828 Amir_0828 907697 908524 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: mxa:MXAN_5545 transcriptional regulator%2C TetR family gene gene848 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0828 Amir_0829 Amir_0829 Amir_0829 908586 909485 + conserved hypothetical protein KEGG: afr:AFE_2323 hypothetical protein gene gene849 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0829 Amir_0830 Amir_0830 Amir_0830 909527 910171 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: mxa:MXAN_5545 transcriptional regulator%2C TetR family gene gene850 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0830 Amir_0831 Amir_0831 Amir_0831 910283 911317 + alpha/beta hydrolase fold protein PFAM: alpha/beta hydrolase fold~KEGG: rsp:RSP_1258 putative hydrolase gene gene851 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0831 Amir_0832 Amir_0832 Amir_0832 911388 912422 + hypothetical protein gene gene852 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0832 Amir_0833 Amir_0833 Amir_0833 912541 913713 + UBA/THIF-type NAD/FAD binding protein PFAM: UBA/THIF-type NAD/FAD binding protein%3B MoeZ/MoeB domain protein%3B Rhodanese domain protein~SMART: Rhodanese domain protein~KEGG: hch:HCH_02851 molybdopterin/thiamine biosynthesis family protein gene gene853 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0833 Amir_0834 Amir_0834 Amir_0834 914297 915115 + aminoglycoside phosphotransferase PFAM: aminoglycoside phosphotransferase~KEGG: rle:RL1223 hypothetical protein gene gene854 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0834 Amir_0835 Amir_0835 Amir_0835 915248 917281 + molybdopterin oxidoreductase PFAM: molybdopterin oxidoreductase%3B molybdopterin oxidoreductase Fe4S4 region%3B molydopterin dinucleotide- binding region~KEGG: msl:Msil_3772 molybdopterin oxidoreductase gene gene855 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0835 Amir_0836 Amir_0836 Amir_0836 917496 918983 + FAD-dependent pyridine nucleotide-disulphide oxidoreductase PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase%3B BFD domain protein [2Fe-2S]-binding domain protein~KEGG: scl:sce3488 nitrite reductase gene gene856 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0836 Amir_0837 Amir_0837 Amir_0837 919254 920606 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: bja:blr2806 nitrite extrusion protein gene gene857 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0837 Amir_0838 Amir_0838 Amir_0838 920982 923486 + nitrite reductase (NAD(P)H)%2C large subunit TIGRFAM: nitrite reductase [NAD(P)H]%2C large subunit~PFAM: nitrite and sulphite reductase 4Fe-4S region%3B FAD-dependent pyridine nucleotide-disulphide oxidoreductase%3B BFD domain protein [2Fe-2S]-binding domain protein%3B nitrite/sulfite reductase hemoprotein beta- component ferrodoxin domain protein~KEGG: bam:Bamb_3936 nitrite reductase (NAD(P)H)%2C large subunit gene gene858 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0838 Amir_0839 Amir_0839 Amir_0839 923501 923893 + nitrite reductase (NAD(P)H)%2C small subunit TIGRFAM: nitrite reductase [NAD(P)H]%2C small subunit~PFAM: Rieske [2Fe-2S] domain protein~KEGG: mfa:Mfla_0318 nitrite reductase (NAD(P)H) large subunit%2C NirD gene gene859 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0839 Amir_0840 Amir_0840 Amir_0840 923932 925077 + Uroporphyrinogen III synthase HEM4 PFAM: Uroporphyrinogen III synthase HEM4%3B transcriptional regulator domain protein~KEGG: scl:sce6449 putative transcriptional regulator gene gene860 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0840 Amir_0841 Amir_0841 Amir_0841 925074 925832 + cobalamin (vitamin B12) biosynthesis CbiX protein PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein~KEGG: rso:RS03744 putative transmembrane protein gene gene861 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0841 Amir_0842 Amir_0842 Amir_0842 925944 926273 - hypothetical protein gene gene862 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0842 Amir_0843 Amir_0843 Amir_0843 926722 927141 - hypothetical protein gene gene863 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0843 Amir_0844 Amir_0844 Amir_0844 927294 927980 + two component transcriptional regulator%2C winged helix family PFAM: response regulator receiver%3B transcriptional regulator domain protein~SMART: response regulator receiver~KEGG: pst:PSPTO_1307 DNA-binding heavy metal response regulator gene gene864 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0844 Amir_0845 Amir_0845 Amir_0845 927977 929347 + histidine kinase PFAM: ATP-binding region ATPase domain protein%3B histidine kinase HAMP region domain protein%3B histidine kinase A domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B histidine kinase HAMP region domain protein~KEGG: gsu:GSU0452 sensor histidine kinase gene gene865 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0845 Amir_0846 Amir_0846 Amir_0846 929344 929691 - hypothetical protein gene gene866 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0846 Amir_0847 Amir_0847 Amir_0847 929748 930827 - TrkA-N domain protein PFAM: TrkA-N domain protein%3B Ion transport 2 domain protein~KEGG: bpy:Bphyt_4906 TrkA-N domain protein gene gene867 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0847 Amir_0848 Amir_0848 Amir_0848 930827 932266 - peptidase M20 PFAM: peptidase M20%3B peptidase dimerization domain protein~KEGG: mgm:Mmc1_1548 peptidase M20 gene gene868 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0848 Amir_0849 Amir_0849 Amir_0849 932326 932709 + conserved hypothetical protein KEGG: mxa:MXAN_6481 hypothetical protein gene gene869 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0849 Amir_0850 Amir_0850 Amir_0850 932790 933335 + hypothetical protein gene gene870 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0850 Amir_0851 Amir_0851 Amir_0851 933357 937406 - UvrD/REP helicase PFAM: UvrD/REP helicase~KEGG: xau:Xaut_0776 UvrD/REP helicase gene gene871 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0851 Amir_0852 Amir_0852 Amir_0852 937928 941080 - UvrD/REP helicase PFAM: UvrD/REP helicase~KEGG: ank:AnaeK_0104 UvrD/REP helicase gene gene872 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0852 Amir_0853 Amir_0853 Amir_0853 941213 941548 + Methylated-DNA-(protein)-cysteine S- methyltransferase DNA binding PFAM: Methylated-DNA-[protein]-cysteine S- methyltransferase DNA binding~KEGG: aci:ACIAD2864 putative methyltransferase gene gene873 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0853 Amir_0854 Amir_0854 Amir_0854 941628 941996 - Tetratricopeptide domain protein SMART: Tetratricopeptide domain protein~KEGG: oca:OCAR_7425 TPR repeat protein gene gene874 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0854 Amir_0855 Amir_0855 Amir_0855 942082 942825 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: mlo:mll2196 short chain oxidoreductase gene gene875 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0855 Amir_0856 Amir_0856 Amir_0856 942907 943812 + transcriptional regulator%2C LysR family PFAM: regulatory protein LysR%3B LysR substrate- binding~KEGG: scl:sce1423 LysR family transcriptional regulator gene gene876 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0856 Amir_0857 Amir_0857 Amir_0857 943891 944799 - protein of unknown function zinc metallopeptidase putative PFAM: protein of unknown function zinc metallopeptidase putative~KEGG: atc:AGR_C_3948 conserved hypothetical protein PA4717 gene gene877 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0857 Amir_0858 Amir_0858 Amir_0858 944829 945872 - protein of unknown function zinc metallopeptidase putative PFAM: protein of unknown function zinc metallopeptidase putative~KEGG: dno:DNO_0928 hypothetical protein gene gene878 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0858 Amir_0859 Amir_0859 Amir_0859 946230 947879 + hypothetical protein KEGG: hypothetical protein gene gene879 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0859 Amir_0860 Amir_0860 Amir_0860 948072 948344 - histone family protein DNA-binding protein PFAM: histone family protein DNA-binding protein~SMART: histone family protein DNA-binding protein~KEGG: pen:PSEEN1871 DNA-binding protein HU-beta gene gene880 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0860 Amir_0861 Amir_0861 Amir_0861 948618 949157 - protein of unknown function DUF1470 PFAM: protein of unknown function DUF1470~KEGG: bcm:Bcenmc03_4753 hypothetical protein gene gene881 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0861 Amir_0862 Amir_0862 Amir_0862 949248 950123 + alpha/beta hydrolase fold protein PFAM: alpha/beta hydrolase fold~KEGG: msl:Msil_2561 alpha/beta hydrolase fold protein gene gene882 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0862 Amir_0863 Amir_0863 Amir_0863 950249 951535 + peptidase M16 domain protein PFAM: peptidase M16 domain protein~KEGG: afw:Anae109_0081 peptidase M16 domain- containing protein gene gene883 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0863 Amir_0864 Amir_0864 Amir_0864 951532 952920 + peptidase M16 domain protein PFAM: peptidase M16 domain protein~KEGG: mxa:MXAN_1624 peptidase%2C M16 (pitrilysin) family gene gene884 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0864 Amir_0865 Amir_0865 Amir_0865 952917 953876 + NUDIX hydrolase PFAM: NUDIX hydrolase%3B NADH pyrophosphatase-like%3B Zinc ribbon NADH pyrophosphatase~KEGG: xcv:XCV0537 NUDIX hydrolase family protein gene gene885 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0865 Amir_0866 Amir_0866 Amir_0866 954106 955323 + ROK family protein PFAM: ROK family protein~KEGG: bha:BH1094 transcriptional repressor of the xylose operon gene gene886 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0866 Amir_0867 Amir_0867 Amir_0867 955320 955928 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: scl:sce8247 TetR family transcriptional regulator gene gene887 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0867 Amir_0868 Amir_0868 Amir_0868 955999 957054 + amidohydrolase PFAM: amidohydrolase%3B Amidohydrolase 3~KEGG: sus:Acid_6576 amidohydrolase gene gene888 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0868 Amir_0869 Amir_0869 Amir_0869 957113 961177 - conserved hypothetical protein KEGG: scl:sce2125 hypothetical protein gene gene889 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0869 Amir_0870 Amir_0870 Amir_0870 961174 962343 - conserved hypothetical protein KEGG: afw:Anae109_1073 hypothetical protein gene gene890 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0870 Amir_0871 Amir_0871 Amir_0871 962346 963824 - hypothetical protein KEGG: scl:sce2127 hypothetical protein gene gene891 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0871 Amir_0872 Amir_0872 Amir_0872 964072 965019 + cobalamin biosynthesis protein CobD TIGRFAM: cobalamin biosynthesis protein CobD~PFAM: cobalamin biosynthesis protein CbiB~KEGG: glo:Glov_3553 cobalamin biosynthesis protein CobD gene gene892 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0872 Amir_0873 Amir_0873 Amir_0873 965106 965984 - putative SURF1 family protein KEGG: bbt:BBta_2034 putative SURF1 family protein gene gene893 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0873 Amir_0874 Amir_0874 Amir_0874 966144 967013 - fructosamine kinase PFAM: fructosamine kinase%3B aminoglycoside phosphotransferase~KEGG: hch:HCH_00321 fructosamine-3-kinase gene gene894 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0874 Amir_0875 Amir_0875 Amir_0875 967010 967468 - protein tyrosine phosphatase PFAM: Protein-tyrosine phosphatase%2C low molecular weight~SMART: Protein-tyrosine phosphatase%2C low molecular weight~KEGG: rru:Rru_A3646 protein tyrosine phosphatase gene gene895 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0875 Amir_0876 Amir_0876 Amir_0876 967621 968277 + HNH nuclease SMART: HNH nuclease~KEGG: ank:AnaeK_4158 HNH nuclease gene gene896 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0876 Amir_0877 Amir_0877 Amir_0877 968490 968609 + hypothetical protein gene gene897 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0877 Amir_0878 Amir_0878 Amir_0878 968695 969738 + aminotransferase class I and II PFAM: aminotransferase class I and II~KEGG: cko:CKO_02518 threonine-phosphate decarboxylase gene gene898 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0878 Amir_0879 Amir_0879 Amir_0879 969735 970877 + protein of unknown function DUF34 PFAM: protein of unknown function DUF34~KEGG: pca:Pcar_2677 hypothetical protein gene gene899 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0879 Amir_0880 Amir_0880 Amir_0880 970879 971616 + protein of unknown function DUF164 PFAM: protein of unknown function DUF164~KEGG: wsu:WS2117 hypothetical protein gene gene900 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0880 Amir_0881 Amir_0881 Amir_0881 971613 972788 + Phosphoglycerate mutase PFAM: Phosphoglycerate mutase%3B ribonuclease H~KEGG: mxa:MXAN_5728 ribonuclease H gene gene901 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0881 Amir_0882 Amir_0882 Amir_0882 973824 974369 - NADPH-dependent FMN reductase PFAM: NADPH-dependent FMN reductase~KEGG: cti:RALTA_A1785 NAD(P)H-dependent FMN reductase%2C sulfate starvation-induced protein gene gene902 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0882 Amir_0883 Amir_0883 Amir_0883 975092 975562 - conserved hypothetical protein KEGG: hypothetical protein gene gene904 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0883 Amir_0884 Amir_0884 Amir_0884 975952 976227 + hypothetical protein gene gene905 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0884 Amir_0885 Amir_0885 Amir_0885 976232 976729 + hypothetical protein KEGG: GJ12100 gene product from transcript GJ12100- RA gene gene906 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0885 Amir_0886 Amir_0886 Amir_0886 976710 979577 + hypothetical protein KEGG: bcr:BCAH187_E0044 hypothetical protein gene gene907 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0886 Amir_0887 Amir_0887 Amir_0887 979574 981517 + hypothetical protein KEGG: ajs:Ajs_4066 single-strand binding protein gene gene908 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0887 Amir_0888 Amir_0888 Amir_0888 981517 982155 + hypothetical protein KEGG: hypothetical protein gene gene909 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0888 Amir_0889 Amir_0889 Amir_0889 982157 983170 + NLP/P60 protein PFAM: NLP/P60 protein~KEGG: gme:Gmet_2365 NLP/P60:sporulation-related protein gene gene910 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0889 Amir_0890 Amir_0890 Amir_0890 983271 983993 + hypothetical protein KEGG: scl:sce1554 prolipoprotein diacylglyceryl transferase gene gene911 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0890 Amir_0891 Amir_0891 Amir_0891 984139 984333 + hypothetical protein gene gene912 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0891 Amir_0892 Amir_0892 Amir_0892 984474 985142 + NADPH-dependent F420 reductase TIGRFAM: NADPH-dependent F420 reductase~PFAM: NADP oxidoreductase coenzyme F420-dependent%3B Semialdehyde dehydrogenase NAD - binding%3B 6- phosphogluconate dehydrogenase NAD-binding~KEGG: oca:OCAR_5001 NADPH-dependent f420 reductase gene gene913 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0892 Amir_0893 Amir_0893 Amir_0893 985142 985897 + putative periplasmic substrate-binding protein KEGG: scl:sce7051 putative periplasmic substrate- binding protein gene gene914 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0893 Amir_0894 Amir_0894 Amir_0894 985902 986837 - proline iminopeptidase KEGG: bte:BTH_II2193 proline iminopeptidase~TIGRFAM: proline iminopeptidase~PFAM: alpha/beta hydrolase fold gene gene915 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0894 Amir_0895 Amir_0895 Amir_0895 986940 988310 + LamG domain protein jellyroll fold domain protein SMART: LamG domain protein jellyroll fold domain protein~KEGG: GK16139 gene product from transcript GK16139- RA gene gene916 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0895 Amir_0896 Amir_0896 Amir_0896 988353 989105 - AAA ATPase SMART: AAA ATPase~KEGG: rme:Rmet_4896 SMC protein-like protein gene gene917 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0896 Amir_0897 Amir_0897 Amir_0897 989208 989693 - pseudogene gene918 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0897 Amir_0898 Amir_0898 Amir_0898 989737 990567 - aminoglycoside phosphotransferase PFAM: aminoglycoside phosphotransferase gene gene919 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0898 Amir_0899 Amir_0899 Amir_0899 990578 991321 - AAA ATPase SMART: AAA ATPase~KEGG: rme:Rmet_4896 SMC protein-like protein gene gene920 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0899 Amir_0900 Amir_0900 Amir_0900 991333 992211 - Radical SAM domain protein PFAM: Radical SAM domain protein~KEGG: rpd:RPD_4322 radical SAM family protein gene gene921 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0900 Amir_0901 Amir_0901 Amir_0901 992208 992489 - hypothetical protein gene gene922 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0901 Amir_0902 Amir_0902 Amir_0902 992673 993551 + helix-turn-helix domain protein PFAM: helix-turn-helix domain protein~SMART: helix-turn-helix domain protein gene gene923 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0902 Amir_0903 Amir_0903 Amir_0903 993548 993742 + protein of unknown function DUF397 PFAM: protein of unknown function DUF397 gene gene924 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0903 Amir_0904 Amir_0904 Amir_0904 993815 994678 - 3-methyl-2-oxobutanoatehydroxymethyltransferase KEGG: glo:Glov_0957 3-methyl-2-oxobutanoate hydroxymethyltransferase~TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase~PFAM: Ketopantoate hydroxymethyltransferase gene gene925 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0904 Amir_0905 Amir_0905 Amir_0905 994858 995433 - hypothetical protein KEGG: bmj:BMULJ_04515 predicted hydrolase or acyltransferase gene gene926 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0905 Amir_0906 Amir_0906 Amir_0906 995843 999127 + lysyl-tRNA synthetase KEGG: mgm:Mmc1_1032 lysyl-tRNA synthetase~TIGRFAM: lysyl-tRNA synthetase~PFAM: tRNA synthetase class II (D K and N)%3B protein of unknown function DUF472%3B protein of unknown function DUF471%3B protein of unknown function DUF470%3B nucleic acid binding OB-fold tRNA/helicase-type gene gene927 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0906 Amir_0907 Amir_0907 Amir_0907 999230 1000795 - TAP domain protein PFAM: TAP domain protein%3B alpha/beta hydrolase fold~KEGG: spe:Spro_2416 TAP domain-containing protein gene gene928 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0907 Amir_0908 Amir_0908 Amir_0908 1000882 1002597 + NAD+ synthetase KEGG: csa:Csal_0495 NH(3)-dependent NAD(+) synthetase~TIGRFAM: NAD+ synthetase~PFAM: NAD synthase%3B Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase gene gene929 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0908 Amir_0909 Amir_0909 Amir_0909 1002841 1004184 + glutamine synthetase catalytic region PFAM: glutamine synthetase catalytic region%3B glutamine synthetase beta-Grasp~KEGG: sat:SYN_01628 glutamine synthetase gene gene930 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0909 Amir_0910 Amir_0910 Amir_0910 1004181 1008275 + methyltransferase FkbM family TIGRFAM: methyltransferase FkbM family~KEGG: pzu:PHZ_c0476 hypothetical protein gene gene931 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0910 Amir_0911 Amir_0911 Amir_0911 1013634 1014770 + phosphate transporter PFAM: phosphate transporter~KEGG: glo:Glov_0587 phosphate transporter gene gene934 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0911 Amir_0912 Amir_0912 Amir_0912 1014767 1014991 + hypothetical protein gene gene935 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0912 Amir_0913 Amir_0913 Amir_0913 1015032 1017968 + (Glutamate--ammonia-ligase) adenylyltransferase PFAM: glutamate-ammonia ligase adenylyltransferase%3B GlnD PII-uridylyltransferase~KEGG: pca:Pcar_2171 adenylylating enzyme for glutamine synthetase gene gene936 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0913 Amir_0914 Amir_0914 Amir_0914 1018102 1018332 - hypothetical protein gene gene937 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0914 Amir_0915 Amir_0915 Amir_0915 1018522 1019133 + hypothetical protein KEGG: sml:Smlt3524 putative autotransporter subtilisin-like protease gene gene938 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0915 Amir_0916 Amir_0916 Amir_0916 1019723 1020433 - Haloacid dehalogenase domain protein hydrolase PFAM: Haloacid dehalogenase domain protein hydrolase~KEGG: aha:AHA_2241 HAD family hydrolase gene gene939 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0916 Amir_0917 Amir_0917 Amir_0917 1020430 1021272 - transcriptional regulator%2C GntR family PFAM: regulatory protein GntR HTH~SMART: regulatory protein GntR HTH~KEGG: yen:YE1303 hypothetical protein gene gene940 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0917 Amir_0918 Amir_0918 Amir_0918 1021550 1021999 + hypothetical protein gene gene941 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0918 Amir_0919 Amir_0919 Amir_0919 1022001 1022285 + hypothetical protein gene gene942 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0919 Amir_0920 Amir_0920 Amir_0920 1022282 1022557 + hypothetical protein gene gene943 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0920 Amir_0921 Amir_0921 Amir_0921 1022862 1024313 + DNA segregation ATPase FtsK/SpoIIIE-related protein KEGG: pha:PSHAb0091 cell divisionFtsK/SpoIIIE domain-containing protein gene gene944 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0921 Amir_0922 Amir_0922 Amir_0922 1024310 1025893 + hypothetical protein gene gene945 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0922 Amir_0923 Amir_0923 Amir_0923 1025910 1026098 + hypothetical protein gene gene946 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0923 Amir_0924 Amir_0924 Amir_0924 1026134 1027333 + integrase family protein PFAM: integrase family protein~KEGG: bcb:BCB4264_A2589 DNA integration/recombination/invertion protein gene gene947 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0924 Amir_0925 Amir_0925 Amir_0925 1027480 1028904 - glutamine synthetase%2C type I TIGRFAM: glutamine synthetase%2C type I~PFAM: glutamine synthetase catalytic region%3B glutamine synthetase beta-Grasp~KEGG: gur:Gura_2228 glutamine synthetase%2C type I gene gene948 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0925 Amir_0926 Amir_0926 Amir_0926 1029103 1029576 + RDD domain containing protein PFAM: RDD domain containing protein~KEGG: shl:Shal_2580 RDD domain-containing protein gene gene949 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0926 Amir_0927 Amir_0927 Amir_0927 1029691 1030419 - hypothetical protein gene gene950 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0927 Amir_0928 Amir_0928 Amir_0928 1030491 1033121 + UvrD/REP helicase PFAM: UvrD/REP helicase%3B HRDC domain protein~SMART: HRDC domain protein~KEGG: bam:Bamb_1322 UvrD/REP helicase gene gene951 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0928 Amir_0929 Amir_0929 Amir_0929 1033675 1034094 + transcription factor WhiB PFAM: transcription factor WhiB%3B HMG-I and HMG-Y DNA-binding domain protein gene gene952 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0929 Amir_0930 Amir_0930 Amir_0930 1034091 1034327 + hypothetical protein gene gene953 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0930 Amir_0931 Amir_0931 Amir_0931 1034760 1035653 + Methyltransferase type 12 PFAM: Methyltransferase type 12%3B Methyltransferase type 11~KEGG: smt:Smal_2740 ubiquinone biosynthesis O- methyltransferase gene gene954 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0931 Amir_0932 Amir_0932 Amir_0932 1035650 1035829 + pseudogene gene955 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0932 Amir_0933 Amir_0933 Amir_0933 1036103 1036660 - hypothetical protein gene gene956 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0933 Amir_0934 Amir_0934 Amir_0934 1036772 1038082 - ABC-1 domain protein PFAM: ABC-1 domain protein~KEGG: mxa:MXAN_0725 ABC1 domain protein gene gene957 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0934 Amir_0935 Amir_0935 Amir_0935 1038592 1039698 - UBA/THIF-type NAD/FAD binding protein PFAM: UBA/THIF-type NAD/FAD binding protein~KEGG: ank:AnaeK_3014 UBA/ThiF-type NAD/FAD binding protein gene gene958 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0935 Amir_0936 Amir_0936 Amir_0936 1039978 1040133 - hypothetical protein gene gene959 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0936 Amir_0937 Amir_0937 Amir_0937 1040335 1040862 + protein of unknown function DUF45 PFAM: protein of unknown function DUF45~KEGG: gox:GOX1405 hypothetical protein gene gene960 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0937 Amir_0938 Amir_0938 Amir_0938 1040866 1042308 - conserved hypothetical protein KEGG: met:M446_4394 NADH-quinone oxidoreductase%2C E subunit gene gene961 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0938 Amir_0939 Amir_0939 Amir_0939 1042388 1043548 + PDZ/DHR/GLGF domain protein PFAM: PDZ/DHR/GLGF domain protein~SMART: PDZ/DHR/GLGF domain protein~KEGG: bha:BH2586 hypothetical protein gene gene962 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0939 Amir_0940 Amir_0940 Amir_0940 1043630 1044172 - hypothetical protein gene gene963 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0940 Amir_0941 Amir_0941 Amir_0941 1044282 1047287 + protein of unknown function UPF0182 PFAM: protein of unknown function UPF0182~KEGG: reh:H16_A1615 hypothetical membrane spanning protein gene gene964 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0941 Amir_0942 Amir_0942 Amir_0942 1048143 1048343 - hypothetical protein gene gene968 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0942 Amir_0943 Amir_0943 Amir_0943 1048791 1049291 + transcriptional regulator%2C PadR-like family PFAM: transcriptional regulator PadR family protein~KEGG: scl:sce6005 transcriptional regulator gene gene969 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0943 Amir_0944 Amir_0944 Amir_0944 1049362 1050465 + peptide chain release factor 2 TIGRFAM: peptide chain release factor 2~PFAM: Class I peptide chain release factor%3B PCRF domain protein~KEGG: gsu:GSU2278 peptide chain release factor 2 gene gene970 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0944 Amir_0945 Amir_0945 Amir_0945 1050653 1051342 + cell division ATP-binding protein FtsE KEGG: bsu:BSU35260 cell-division ATP-binding protein~TIGRFAM: cell division ATP-binding protein FtsE~PFAM: ABC transporter related~SMART: AAA ATPase gene gene971 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0945 Amir_0946 Amir_0946 Amir_0946 1051381 1052283 + cell division protein FtsX PFAM: protein of unknown function DUF214~KEGG: ppd:Ppro_2411 hypothetical protein gene gene972 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0946 Amir_0947 Amir_0947 Amir_0947 1052314 1052799 + SsrA-binding protein TIGRFAM: SsrA-binding protein~PFAM: SmpB protein~KEGG: ppd:Ppro_1314 SsrA-binding protein gene gene973 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0947 Amir_0948 Amir_0948 Amir_0948 1052864 1053508 - two component transcriptional regulator%2C LuxR family PFAM: response regulator receiver%3B regulatory protein LuxR~SMART: regulatory protein LuxR%3B response regulator receiver~KEGG: tgr:Tgr7_2171 two component transcriptional regulator%2C LuxR family gene gene974 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0948 Amir_0949 Amir_0949 Amir_0949 1053496 1054746 - histidine kinase PFAM: histidine kinase dimerization and phosphoacceptor region%3B ATP-binding region ATPase domain protein~KEGG: sus:Acid_2792 PAS/PAC sensor signal transduction histidine kinase gene gene975 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0949 Amir_0950 Amir_0950 Amir_0950 1055339 1056070 - hypothetical protein gene gene977 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0950 Amir_0951 Amir_0951 Amir_0951 1056385 1058703 - ATP-dependent helicase HrpB KEGG: rce:RC1_1438 ATP-dependent helicase protein%2C putative~TIGRFAM: ATP-dependent helicase HrpB~PFAM: Helicase ATP-dependent domain protein%3B helicase domain protein%3B helicase-associated domain protein%3B DEAD/DEAH box helicase domain protein~SMART: DEAD-like helicase%3B helicase domain protein gene gene978 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0951 Amir_0952 Amir_0952 Amir_0952 1058720 1059853 + glycosyl transferase family 2 PFAM: glycosyl transferase family 2~KEGG: gbe:GbCGDNIH1_1979 HpnB protein gene gene979 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0952 Amir_0953 Amir_0953 Amir_0953 1059858 1060682 + GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: mlo:mlr0192 hypothetical protein gene gene980 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0953 Amir_0954 Amir_0954 Amir_0954 1060794 1062101 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1%3B General substrate transporter~KEGG: afw:Anae109_0137 major facilitator transporter gene gene981 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0954 Amir_0955 Amir_0955 Amir_0955 1062170 1062934 + protein-disulfide isomerase-like protein KEGG: maq:Maqu_3013 DsbA oxidoreductase gene gene982 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0955 Amir_0956 Amir_0956 Amir_0956 1062951 1064255 - Phenylacetate--CoA ligase KEGG: dps:DP1266 coenzyme F390 synthetase II gene gene983 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0956 Amir_0957 Amir_0957 Amir_0957 1064749 1066320 - serine/threonine protein kinase PFAM: Serine/threonine protein kinase-related%3B tyrosine protein kinase~SMART: serine/threonine protein kinase%3B tyrosine protein kinase~KEGG: bsu:BSU15770 protein kinase gene gene985 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0957 Amir_0958 Amir_0958 Amir_0958 1066453 1069656 - protein of unknown function DUF450 PFAM: protein of unknown function DUF450~SMART: DEAD-like helicase~KEGG: tbd:Tbd_2685 DEAD/DEAH box helicase gene gene986 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0958 Amir_0959 Amir_0959 Amir_0959 1069664 1070992 - restriction modification system DNA specificity domain protein PFAM: restriction modification system DNA specificity domain~KEGG: rsh:Rsph17029_1858 restriction modification system DNA specificity subunit gene gene987 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0959 Amir_0960 Amir_0960 Amir_0960 1070989 1073001 - N-6 DNA methylase PFAM: N-6 DNA methylase~KEGG: hha:Hhal_1155 N-6 DNA methylase gene gene988 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0960 Amir_0961 Amir_0961 Amir_0961 1073083 1075116 - N-6 DNA methylase PFAM: N-6 DNA methylase%3B putative RNA methylase~KEGG: bvi:Bcep1808_0009 N-6 DNA methylase gene gene989 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0961 Amir_0962 Amir_0962 Amir_0962 1075217 1077066 + pseudogene gene990 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0962 Amir_0963 Amir_0963 Amir_0963 1077307 1078287 + hypothetical protein KEGG: hypothetical protein gene gene991 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0963 Amir_0964 Amir_0964 Amir_0964 1078411 1078551 + hypothetical protein gene gene992 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0964 Amir_0965 Amir_0965 Amir_0965 1078583 1079779 - hypothetical protein KEGG: rde:RD1_2154 hypothetical protein gene gene993 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0965 Amir_0966 Amir_0966 Amir_0966 1079924 1081480 + protein serine/threonine phosphatase PFAM: Stage II sporulation E family protein~SMART: protein phosphatase 2C domain protein~KEGG: sus:Acid_4295 response regulator receiver modulated serine phosphatase gene gene994 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0966 Amir_0967 Amir_0967 Amir_0967 1081477 1082454 + cobalamin B12-binding domain protein PFAM: cobalamin B12-binding domain protein~KEGG: rpc:RPC_1467 cobalamin B12-binding gene gene995 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0967 Amir_0968 Amir_0968 Amir_0968 1082545 1082907 + anti-sigma-factor antagonist TIGRFAM: anti-anti-sigma factor~PFAM: Sulfate transporter/antisigma-factor antagonist STAS~KEGG: swi:Swit_1492 anti-sigma-factor antagonist gene gene996 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0968 Amir_0969 Amir_0969 Amir_0969 1082983 1083417 + hypothetical protein gene gene997 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0969 Amir_0970 Amir_0970 Amir_0970 1083604 1084890 + extracellular solute-binding protein family 1 PFAM: extracellular solute-binding protein family 1~KEGG: smd:Smed_3329 extracellular solute-binding protein family 1 gene gene998 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0970 Amir_0971 Amir_0971 Amir_0971 1084896 1085852 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: sugar ABC transporter%3B K02025 multiple sugar transport system permease protein gene gene999 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0971 Amir_0972 Amir_0972 Amir_0972 1085849 1086679 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: sme:SMc04137 putative transport system permease ABC transporter protein gene gene1000 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0972 Amir_0973 Amir_0973 Amir_0973 1086676 1087242 + hypothetical protein KEGG: acp:A2cp1_3283 hypothetical protein gene gene1001 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0973 Amir_0974 Amir_0974 Amir_0974 1087260 1087580 + protein of unknown function DUF718 PFAM: protein of unknown function DUF718~KEGG: bcm:Bcenmc03_6232 L-rhamnose 1-epimerase gene gene1002 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0974 Amir_0975 Amir_0975 Amir_0975 1087652 1088668 + transcriptional regulator%2C LacI family PFAM: periplasmic binding protein/LacI transcriptional regulator%3B regulatory protein LacI~SMART: regulatory protein LacI~KEGG: aav:Aave_4199 transcriptional regulator%2C LacI family gene gene1003 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0975 Amir_0976 Amir_0976 Amir_0976 1088702 1091029 - transcriptional regulator%2C XRE family PFAM: Tetratricopeptide TPR_2 repeat protein%3B Tetratricopeptide TPR_4%3B TPR repeat-containing protein~SMART: helix-turn-helix domain protein%3B Tetratricopeptide domain protein~KEGG: scl:sce6858 hypothetical protein gene gene1004 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0976 Amir_0977 Amir_0977 Amir_0977 1091435 1093690 + Terpene synthase metal-binding domain protein PFAM: Terpene synthase metal-binding domain protein~KEGG: mxa:MXAN_6247 terpene synthase%2C metal binding domain protein gene gene1005 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0977 Amir_0978 Amir_0978 Amir_0978 1093751 1094320 - NUDIX hydrolase PFAM: NUDIX hydrolase~KEGG: oan:Oant_4146 NUDIX hydrolase gene gene1006 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0978 Amir_0979 Amir_0979 Amir_0979 1094454 1094558 - hypothetical protein gene gene1007 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0979 Amir_0980 Amir_0980 Amir_0980 1094654 1095991 - transcriptional regulator%2C XRE family PFAM: helix-turn-helix domain protein~SMART: helix-turn-helix domain protein~KEGG: afw:Anae109_0769 heat shock protein DnaJ domain-containing protein gene gene1008 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0980 Amir_0981 Amir_0981 Amir_0981 1096167 1096535 + pseudogene gene1009 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0981 Amir_0982 Amir_0982 Amir_0982 1096592 1097392 - conserved hypothetical protein KEGG: scl:sce6462 hypothetical protein gene gene1010 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0982 Amir_0983 Amir_0983 Amir_0983 1097714 1098841 + Acyl-CoA dehydrogenase type 2 domain protein PFAM: Acyl-CoA dehydrogenase type 2 domain~KEGG: azc:AZC_3175 putative FMNH2-dependent monooxygenase gene gene1011 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0983 Amir_0984 Amir_0984 Amir_0984 1098842 1099873 + eIF-2B alpha/beta/delta-related uncharacterized protein KEGG: aba:Acid345_1175 translation initiation factor 2B subunit I family (IF-2BI)~TIGRFAM: eIF-2B alpha/beta/delta-related uncharacterized protein~PFAM: initiation factor 2B related gene gene1012 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0984 Amir_0985 Amir_0985 Amir_0985 1099866 1100540 + 2%2C3-diketo-5-methylthio-1-phosphopentanephosphat ase TIGRFAM: 2%2C3-diketo-5-methylthio-1-phosphopentane phosphatase~PFAM: Haloacid dehalogenase domain protein hydrolase~KEGG: tgr:Tgr7_2625 2%2C3-diketo-5-methylthio-1- phosphopentane phosphatase gene gene1013 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0985 Amir_0986 Amir_0986 Amir_0986 1100537 1101157 + methylthioribulose-1-phosphate dehydratase TIGRFAM: methylthioribulose-1-phosphate dehydratase~PFAM: class II aldolase/adducin family protein~KEGG: tgr:Tgr7_2623 methylthioribulose-1-phosphate dehydratase gene gene1014 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0986 Amir_0987 Amir_0987 Amir_0987 1101154 1101723 + Acireductone dioxygenase ARD PFAM: Acireductone dioxygenase ARD~KEGG: tgr:Tgr7_2624 acireductone dioxygenase ARD gene gene1015 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0987 Amir_0988 Amir_0988 Amir_0988 1101756 1102631 - aminoglycoside phosphotransferase PFAM: aminoglycoside phosphotransferase~KEGG: cvi:CV_1007 serine/threonine protein kinase gene gene1016 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0988 Amir_0989 Amir_0989 Amir_0989 1103164 1104954 + cytochrome c oxidase%2C subunit I KEGG: bha:BH2614 cytochrome caa3 oxidase (subunit I)~TIGRFAM: cytochrome c oxidase%2C subunit I~PFAM: cytochrome c oxidase subunit I gene gene1017 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0989 Amir_0990 Amir_0990 Amir_0990 1105046 1106266 + phosphoserine phosphatase SerB KEGG: scl:sce0663 hypothetical protein~TIGRFAM: phosphoserine phosphatase SerB%3B HAD- superfamily hydrolase%2C subfamily IB (PSPase-like)~PFAM: Haloacid dehalogenase domain protein hydrolase%3B amino acid-binding ACT domain protein gene gene1018 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0990 Amir_0991 Amir_0991 Amir_0991 1106263 1107048 + protein of unknown function UPF0099 PFAM: protein of unknown function UPF0099~KEGG: predicted protein%3B K04794 peptidyl-tRNA hydrolase%2C PTH2 family gene gene1019 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0991 Amir_0992 Amir_0992 Amir_0992 1108027 1108824 + hypothetical protein gene gene1020 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0992 Amir_0993 Amir_0993 Amir_0993 1108821 1109024 + pseudogene gene1021 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0993 Amir_0994 Amir_0994 Amir_0994 1109105 1110517 + Phospholipase D KEGG: phospholipase/phosphatidylserine synthase~PFAM: phospholipase D/Transphosphatidylase~SMART: phospholipase D/Transphosphatidylase gene gene1022 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0994 Amir_0995 Amir_0995 Amir_0995 1110535 1112580 - helicase c2 SMART: helicase c2%3B DEAD-like helicase~KEGG: mxa:MXAN_6717 putative ATP-dependent helicase gene gene1023 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0995 Amir_0996 Amir_0996 Amir_0996 1112737 1113312 - BioY protein PFAM: BioY protein~KEGG: mxa:MXAN_2207 BioY family protein gene gene1024 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0996 Amir_0997 Amir_0997 Amir_0997 1113448 1114800 - glycosyltransferase probably involved in cell wall biogenesis KEGG: cak:Caul_0228 polysaccharide deacetylase gene gene1025 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0997 Amir_0998 Amir_0998 Amir_0998 1114797 1115312 - hypothetical protein gene gene1026 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0998 Amir_0999 Amir_0999 Amir_0999 1115593 1116381 + hypothetical protein KEGG: ect:ECIAI39_4258 putative invasin/intimin protein gene gene1027 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_0999 Amir_1000 Amir_1000 Amir_1000 1116378 1116551 + LPXTG-motif cell wall anchor domain protein TIGRFAM: LPXTG-motif cell wall anchor domain protein gene gene1028 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1000 Amir_1001 Amir_1001 Amir_1001 1116623 1117795 + UDP-N-acetylglucosamine 2-epimerase KEGG: rso:RSp0510 UDP-N-acetylglucosamine 2- epimerase protein~TIGRFAM: UDP-N-acetylglucosamine 2-epimerase~PFAM: UDP-N-acetylglucosamine 2-epimerase gene gene1029 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1001 Amir_1002 Amir_1002 Amir_1002 1117922 1118578 + hypothetical protein gene gene1030 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1002 Amir_1003 Amir_1003 Amir_1003 1118721 1119290 - isochorismatase hydrolase PFAM: isochorismatase hydrolase~KEGG: sme:SMc02275 pyrazinamidase/nicotinamidase (includes: pyrazinamidase%2C nicotinamidase) protein gene gene1031 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1003 Amir_1004 Amir_1004 Amir_1004 1119301 1120614 - nicotinate phosphoribosyltransferase TIGRFAM: nicotinate phosphoribosyltransferase~PFAM: Nicotinate phosphoribosyltransferase-like~KEGG: rpi:Rpic_4654 nicotinate phosphoribosyltransferase gene gene1032 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1004 Amir_1005 Amir_1005 Amir_1005 1120667 1120966 + ATP-dependent Clp protease adaptor protein ClpS PFAM: ATP-dependent Clp protease adaptor protein ClpS~KEGG: bbr:BB2017 ATP-dependent Clp protease adaptor protein ClpS gene gene1033 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1005 Amir_1006 Amir_1006 Amir_1006 1120963 1121520 + hypothetical protein gene gene1034 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1006 Amir_1007 Amir_1007 Amir_1007 1121517 1122131 + peptidase S58%2C DmpA KEGG: aav:Aave_1804 peptidase S58%2C DmpA gene gene1035 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1007 Amir_1008 Amir_1008 Amir_1008 1122293 1122862 + conserved hypothetical protein KEGG: scl:sce7049 hypothetical protein gene gene1036 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1008 Amir_1009 Amir_1009 Amir_1009 1122872 1123327 + Mov34/MPN/PAD-1 family protein PFAM: Mov34/MPN/PAD-1 family protein~SMART: Mov34/MPN/PAD-1 family protein~KEGG: nmu:Nmul_A0971 Mov34/MPN/PAD-1 gene gene1037 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1009 Amir_1010 Amir_1010 Amir_1010 1123390 1123662 + thiamineS protein PFAM: thiamineS protein~KEGG: hch:HCH_02849 molybdopterin converting factor%2C small subunit gene gene1038 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1010 Amir_1011 Amir_1011 Amir_1011 1123670 1124620 + cysteine synthase TIGRFAM: cysteine synthase~PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit~KEGG: reh:H16_A0807 cysteine synthase gene gene1039 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1011 Amir_1012 Amir_1012 Amir_1012 1125224 1125994 + beta-lactamase domain protein PFAM: beta-lactamase domain protein~KEGG: bcr:BCAH187_A1247 metallo-beta-lactamase family protein gene gene1040 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1012 Amir_1013 Amir_1013 Amir_1013 1126035 1126871 - SMP-30/Gluconolaconase/LRE domain protein PFAM: SMP-30/Gluconolaconase/LRE domain protein~KEGG: sal:Sala_3160 senescence marker protein-30 (SMP-30) gene gene1041 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1013 Amir_1014 Amir_1014 Amir_1014 1127087 1127722 + Rhomboid family protein PFAM: Rhomboid family protein~KEGG: amc:MADE_01334 rhomboid-like protein gene gene1042 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1014 Amir_1015 Amir_1015 Amir_1015 1127719 1128513 + glutamate racemase KEGG: bcy:Bcer98_3204 glutamate racemase~TIGRFAM: glutamate racemase~PFAM: Asp/Glu/hydantoin racemase gene gene1043 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1015 Amir_1016 Amir_1016 Amir_1016 1128531 1129343 + beta-lactamase domain protein PFAM: beta-lactamase domain protein~KEGG: dal:Dalk_3435 beta-lactamase domain protein gene gene1044 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1016 Amir_1017 Amir_1017 Amir_1017 1129333 1129836 + Hemerythrin HHE cation binding domain protein PFAM: Hemerythrin HHE cation binding domain protein~KEGG: scl:sce7477 hypothetical protein gene gene1045 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1017 Amir_1018 Amir_1018 Amir_1018 1129893 1130321 + OsmC family protein PFAM: OsmC family protein~KEGG: mxa:MXAN_2740 OsmC/Ohr family protein gene gene1046 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1018 Amir_1019 Amir_1019 Amir_1019 1130397 1130933 - conserved hypothetical protein KEGG: afw:Anae109_3915 hypothetical protein gene gene1047 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1019 Amir_1020 Amir_1020 Amir_1020 1130987 1131751 + ribonuclease PH KEGG: gsu:GSU1795 ribonuclease PH~TIGRFAM: ribonuclease PH~PFAM: 3' exoribonuclease%3B Exoribonuclease%2C phosphorolytic domain 2 gene gene1048 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1020 Amir_1021 Amir_1021 Amir_1021 1131748 1132344 + non-canonical purine NTP pyrophosphatase%2C rdgB/HAM1 family TIGRFAM: non-canonical purine NTP pyrophosphatase%2C rdgB/HAM1 family~PFAM: Ham1 family protein~KEGG: dds:Ddes_1892 non-canonical purine NTP pyrophosphatase%2C RdgB/HAM1 family gene gene1049 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1021 Amir_1022 Amir_1022 Amir_1022 1132329 1133312 - hypothetical protein KEGG: bph:Bphy_3741 hypothetical protein gene gene1050 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1022 Amir_1023 Amir_1023 Amir_1023 1133344 1133817 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen%3B Redoxin domain protein~KEGG: yen:YE1135 thioredoxin-dependent thiol peroxidase gene gene1051 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1023 Amir_1024 Amir_1024 Amir_1024 1133839 1134366 - hypothetical protein KEGG: aba:Acid345_1279 hypothetical protein gene gene1052 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1024 Amir_1025 Amir_1025 Amir_1025 1134651 1135673 - Luciferase-like monooxygenase PFAM: Luciferase-like monooxygenase~KEGG: bvi:Bcep1808_1087 luciferase family protein gene gene1053 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1025 Amir_1026 Amir_1026 Amir_1026 1135785 1136843 + FAD-dependent pyridine nucleotide-disulphide oxidoreductase PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase~KEGG: oan:Oant_2127 FAD-dependent pyridine nucleotide-disulphide oxidoreductase gene gene1054 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1026 Amir_1027 Amir_1027 Amir_1027 1137043 1138020 - SNARE associated Golgi protein PFAM: SNARE associated Golgi protein~KEGG: pde:Pden_3867 DedA family protein gene gene1055 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1027 Amir_1028 Amir_1028 Amir_1028 1138127 1139095 + cobalamin synthesis protein P47K PFAM: cobalamin synthesis protein P47K%3B cobalamin synthesis CobW domain protein~KEGG: vvu:VV1_0002 putative GTPase gene gene1056 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1028 Amir_1029 Amir_1029 Amir_1029 1139490 1139711 + hypothetical protein gene gene1058 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1029 Amir_1030 Amir_1030 Amir_1030 1139765 1140379 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: bat:BAS3063 TetR family transcriptional regulator gene gene1059 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1030 Amir_1031 Amir_1031 Amir_1031 1140617 1141555 + putative esterase PFAM: putative esterase~KEGG: mxa:MXAN_4935 putative esterase gene gene1060 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1031 Amir_1032 Amir_1032 Amir_1032 1141662 1142696 + Alcohol dehydrogenase GroES domain protein PFAM: Alcohol dehydrogenase GroES domain protein%3B Alcohol dehydrogenase zinc-binding domain protein~KEGG: rso:RSc0624 zinc-dependent alcohol dehydrogenase oxidoreductase protein gene gene1061 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1032 Amir_1033 Amir_1033 Amir_1033 1142764 1143471 - CobB/CobQ domain protein glutamine amidotransferase PFAM: CobB/CobQ domain protein glutamine amidotransferase~KEGG: rsh:Rsph17029_3564 cobyric acid synthase gene gene1062 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1033 Amir_1034 Amir_1034 Amir_1034 1143461 1144645 - domain of unknown function DUF1727 PFAM: domain of unknown function DUF1727%3B Mur ligase middle domain protein~KEGG: ilo:IL0432 UDP-N-acetylmuramyl pentapeptide synthase gene gene1063 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1034 Amir_1035 Amir_1035 Amir_1035 1144758 1145237 - transcriptional regulator%2C XRE family PFAM: helix-turn-helix domain protein~SMART: helix-turn-helix domain protein~KEGG: reu:Reut_A1326 anaerobic benzoate catabolism transcriptional regulator gene gene1064 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1035 Amir_1036 Amir_1036 Amir_1036 1145358 1146104 - protein of unknown function DUF218 PFAM: protein of unknown function DUF218~KEGG: mxa:MXAN_6927 putative SanA protein gene gene1065 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1036 Amir_1037 Amir_1037 Amir_1037 1146600 1148798 - cell envelope-related transcriptional attenuator TIGRFAM: cell envelope-related function transcriptional attenuator%2C LytR/CpsA family~PFAM: cell envelope-related transcriptional attenuator~KEGG: bce:BC5265 membrane-bound transcriptional regulator LytR gene gene1066 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1037 Amir_1038 Amir_1038 Amir_1038 1148989 1151952 + glycyl-tRNA synthetase%2C beta subunit KEGG: hypothetical protein%3B K01878 glycyl-tRNA synthetase alpha chain~TIGRFAM: glycyl-tRNA synthetase%2C beta subunit%3B glycyl-tRNA synthetase%2C alpha subunit~PFAM: glycyl-tRNA synthetase alpha subunit%3B glycyl- tRNA synthetase beta subunit gene gene1067 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1038 Amir_1039 Amir_1039 Amir_1039 1152123 1153850 - peptidase S8 and S53 subtilisin kexin sedolisin PFAM: peptidase S8 and S53 subtilisin kexin sedolisin~KEGG: hypothetical protein gene gene1068 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1039 Amir_1040 Amir_1040 Amir_1040 1154158 1155252 + Monosaccharide-transporting ATPase KEGG: rpi:Rpic_4074 D-xylose ABC transporter%2C periplasmic substrate-binding protein gene gene1069 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1040 Amir_1041 Amir_1041 Amir_1041 1155319 1156041 - hypothetical protein KEGG: aba:Acid345_1276 hypothetical protein gene gene1070 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1041 Amir_1042 Amir_1042 Amir_1042 1156638 1156844 + cold-shock DNA-binding domain protein PFAM: Cold-shock protein DNA-binding~SMART: Cold shock protein~KEGG: mpt:Mpe_A2202 cold-shock DNA-binding protein family protein gene gene1071 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1042 Amir_1043 Amir_1043 Amir_1043 1156980 1157357 - conserved hypothetical protein KEGG: cak:Caul_1308 hypothetical protein gene gene1072 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1043 Amir_1044 Amir_1044 Amir_1044 1157476 1159557 - Alpha-galactosidase KEGG: aba:Acid345_1677 alpha-galactosidase~PFAM: Glycosyl hydrolase family 98 putative carbohydrate binding module%3B glycoside hydrolase clan GH- D~SMART: Glycosyl hydrolase family 98 putative carbohydrate binding module gene gene1073 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1044 Amir_1045 Amir_1045 Amir_1045 1159759 1161522 - acyl-CoA dehydrogenase domain protein PFAM: acyl-CoA dehydrogenase domain protein%3B Acyl- CoA dehydrogenase type 2 domain~KEGG: sse:Ssed_3347 acyl-CoA dehydrogenase-like protein gene gene1074 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1045 Amir_1046 Amir_1046 Amir_1046 1161519 1162505 - zinc finger SWIM domain protein PFAM: zinc finger SWIM domain protein~KEGG: mxa:MXAN_7273 SWIM zinc finger domain protein gene gene1075 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1046 Amir_1047 Amir_1047 Amir_1047 1162498 1165584 - Non-specific serine/threonine protein kinase KEGG: scl:sce3369 SWF/SNF family helicase~PFAM: SNF2-related protein%3B helicase domain protein~SMART: DEAD-like helicase%3B helicase domain protein gene gene1076 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1047 Amir_1048 Amir_1048 Amir_1048 1166313 1166585 - hypothetical protein KEGG: gbm:Gbem_1481 transglycosylase-associated protein gene gene1077 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1048 Amir_1049 Amir_1049 Amir_1049 1166674 1167405 - hypothetical protein KEGG: Hypothetical protein CBG18987 gene gene1078 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1049 Amir_1050 Amir_1050 Amir_1050 1167448 1168533 - DNA-cytosine methyltransferase TIGRFAM: DNA-cytosine methyltransferase~PFAM: C-5 cytosine-specific DNA methylase~KEGG: sfu:Sfum_2797 DNA-cytosine methyltransferase gene gene1079 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1050 Amir_1051 Amir_1051 Amir_1051 1168548 1168973 - DNA mismatch endonuclease Vsr TIGRFAM: DNA mismatch endonuclease Vsr~PFAM: DNA mismatch endonuclease vsr~KEGG: ajs:Ajs_2197 putative very short patch repair protein gene gene1080 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1051 Amir_1052 Amir_1052 Amir_1052 1169035 1170150 - hypothetical protein KEGG: scl:sce2746 protein kinase gene gene1081 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1052 Amir_1053 Amir_1053 Amir_1053 1170229 1170900 + hypothetical protein gene gene1082 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1053 Amir_1054 Amir_1054 Amir_1054 1171277 1172479 + ErfK/YbiS/YcfS/YnhG family protein PFAM: ErfK/YbiS/YcfS/YnhG family protein~KEGG: mca:MCA1018 ErfK/YbiS/YcfS/YnhG family protein gene gene1084 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1054 Amir_1055 Amir_1055 Amir_1055 1172496 1174124 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ank:AnaeK_1721 ABC transporter-related protein gene gene1085 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1055 Amir_1056 Amir_1056 Amir_1056 1174327 1174953 - Exonuclease RNase T and DNA polymerase III PFAM: Exonuclease RNase T and DNA polymerase III~SMART: Exonuclease~KEGG: similar to CGI-114 protein%3B K01175 gene gene1087 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1056 Amir_1057 Amir_1057 Amir_1057 1175057 1176331 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: mrd:Mrad2831_0079 major facilitator transporter gene gene1088 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1057 Amir_1058 Amir_1058 Amir_1058 1176403 1177371 + transcriptional regulator%2C AraC family PFAM: ThiJ/PfpI domain protein%3B helix-turn-helix- domain containing protein AraC type~SMART: helix-turn-helix- domain containing protein AraC type~KEGG: bac:BamMC406_2532 AraC family transcriptional regulator gene gene1089 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1058 Amir_1059 Amir_1059 Amir_1059 1177470 1178231 + transcriptional regulator%2C DeoR family PFAM: regulatory protein DeoR~SMART: regulatory protein DeoR~KEGG: cak:Caul_0312 DeoR family transcriptional regulator gene gene1090 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1059 Amir_1060 Amir_1060 Amir_1060 1178228 1179154 + 1-phosphofructokinase TIGRFAM: 1-phosphofructokinase~PFAM: PfkB domain protein~KEGG: gbm:Gbem_3234 1-phosphofructokinase gene gene1091 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1060 Amir_1061 Amir_1061 Amir_1061 1179151 1179600 + putative PTS IIA-like nitrogen-regulatory protein PtsN TIGRFAM: PTS system%2C fructose subfamily%2C IIA subunit~PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2~KEGG: vco:VC0395_A1421 PTS system%2C fructose- specific IIABC component gene gene1092 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1061 Amir_1062 Amir_1062 Amir_1062 1179597 1181030 + PTS system%2C fructose subfamily%2C IIC subunit TIGRFAM: PTS system%2C fructose subfamily%2C IIC subunit%3B PTS system%2C fructose-specific%2C IIB subunnit~PFAM: phosphotransferase system PTS fructose- specific IIB subunit%3B phosphotransferase system EIIC~KEGG: rsh:Rsph17029_0435 PTS system%2C fructose subfamily%2C IIC subunit gene gene1093 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1062 Amir_1063 Amir_1063 Amir_1063 1181005 1182555 - membrane-flanked domain protein PFAM: membrane-flanked domain~KEGG: bha:BH1721 hypothetical protein gene gene1094 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1063 Amir_1064 Amir_1064 Amir_1064 1182648 1183133 - membrane-flanked domain protein PFAM: membrane-flanked domain~KEGG: bsu:BSU04590 hypothetical protein gene gene1095 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1064 Amir_1065 Amir_1065 Amir_1065 1183207 1183359 - hypothetical protein gene gene1096 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1065 Amir_1066 Amir_1066 Amir_1066 1183493 1185175 - AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: bur:Bcep18194_C6898 AMP-dependent synthetase and ligase gene gene1097 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1066 Amir_1067 Amir_1067 Amir_1067 1185217 1185420 - hypothetical protein gene gene1098 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1067 Amir_1068 Amir_1068 Amir_1068 1185734 1186228 - transcriptional regulator%2C MarR family PFAM: regulatory protein MarR~SMART: regulatory protein MarR~KEGG: atc:AGR_C_466 hypothetical protein gene gene1099 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1068 Amir_1069 Amir_1069 Amir_1069 1186316 1186921 + NAD(P)H dehydrogenase (quinone) PFAM: NAD(P)H dehydrogenase (quinone)%3B NADPH- dependent FMN reductase~KEGG: pmy:Pmen_1298 NAD(P)H dehydrogenase (quinone) gene gene1100 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1069 Amir_1070 Amir_1070 Amir_1070 1187090 1188232 + hypothetical protein KEGG: CG13731 gene gene1101 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1070 Amir_1071 Amir_1071 Amir_1071 1188362 1189357 + Tetratricopeptide TPR_2 repeat protein PFAM: Tetratricopeptide TPR_2 repeat protein%3B TPR repeat-containing protein~SMART: Tetratricopeptide domain protein~KEGG: bcm:Bcenmc03_0217 TPR repeat-containing protein gene gene1102 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1071 Amir_1072 Amir_1072 Amir_1072 1189746 1190081 + hypothetical protein gene gene1103 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1072 Amir_1073 Amir_1073 Amir_1073 1190138 1192399 + protein-export membrane protein SecD TIGRFAM: protein-export membrane protein SecD%3B protein-export membrane protein SecF%3B protein-export membrane protein%2C SecD/SecF family~PFAM: SecD/SecF/SecDF export membrane protein~KEGG: secD%3B protein-export membrane protein SecD%3B K03072 preprotein translocase SecD subunit%3B K03074 preprotein translocase SecF subunit gene gene1104 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1073 Amir_1074 Amir_1074 Amir_1074 1192627 1193808 + Lactate 2-monooxygenase PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase~KEGG: hypothetical protein%3B K00101 L-lactate dehydrogenase (cytochrome) gene gene1105 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1074 Amir_1075 Amir_1075 Amir_1075 1193875 1194735 + hypothetical protein KEGG: bha:BH1891 hypothetical protein gene gene1106 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1075 Amir_1076 Amir_1076 Amir_1076 1194739 1195434 - transcriptional regulator%2C AraC family SMART: helix-turn-helix- domain containing protein AraC type~KEGG: xca:xccb100_0257 transcriptional regulator%2C AraC family gene gene1107 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1076 Amir_1077 Amir_1077 Amir_1077 1195471 1196865 - Carbohydrate binding family 6 PFAM: Carbohydrate binding family 6%3B glycoside hydrolase family 16~SMART: cellulose binding type IV~KEGG: hypothetical protein gene gene1108 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1077 Amir_1078 Amir_1078 Amir_1078 1197132 1198799 - DNA-directed DNA polymerase PFAM: DNA-directed DNA polymerase~SMART: DNA-directed DNA polymerase~KEGG: hha:Hhal_2421 DNA polymerase I gene gene1109 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1078 Amir_1079 Amir_1079 Amir_1079 1198874 1201366 + Tetratricopeptide TPR_4 PFAM: Tetratricopeptide TPR_4~KEGG: bid:Bind_1912 TPR repeat-containing protein gene gene1110 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1079 Amir_1080 Amir_1080 Amir_1080 1201368 1202015 - Methyltransferase type 11 PFAM: Methyltransferase type 11%3B Methyltransferase type 12~KEGG: smd:Smed_6054 methyltransferase type 11 gene gene1111 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1080 Amir_1081 Amir_1081 Amir_1081 1202225 1203148 - Proline dehydrogenase PFAM: Proline dehydrogenase~KEGG: mxa:MXAN_7405 proline dehydrogenase gene gene1112 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1081 Amir_1082 Amir_1082 Amir_1082 1203152 1204780 - delta-1-pyrroline-5-carboxylate dehydrogenase TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase~PFAM: Aldehyde Dehydrogenase~KEGG: scl:sce4459 1-pyrroline-5-carboxylate dehydrogenase gene gene1113 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1082 Amir_1083 Amir_1083 Amir_1083 1204900 1206438 + putative transcriptional regulator%2C PucR family KEGG: bha:BH1072 hypothetical protein gene gene1114 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1083 Amir_1084 Amir_1084 Amir_1084 1206473 1207273 - 60 kDa inner membrane insertion protein PFAM: 60 kDa inner membrane insertion protein~KEGG: gox:GOX1827 putative inner membrane protein translocase component YidC gene gene1115 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1084 Amir_1085 Amir_1085 Amir_1085 1207310 1207588 - hypothetical protein gene gene1116 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1085 Amir_1086 Amir_1086 Amir_1086 1207604 1208224 - hypothetical protein KEGG: bbt:BBta_0026 uridine kinase gene gene1117 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1086 Amir_1087 Amir_1087 Amir_1087 1208249 1208848 - protein of unknown function DUF402 PFAM: protein of unknown function DUF402 gene gene1118 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1087 Amir_1088 Amir_1088 Amir_1088 1208870 1210285 - putative phytochrome sensor protein PFAM: GAF domain protein%3B transcriptional regulator domain protein~KEGG: rme:Rmet_4104 sigma54 specific transcriptional regulator with GAF sensor%2C fis family gene gene1119 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1088 Amir_1089 Amir_1089 Amir_1089 1210449 1211972 + aldehyde dehydrogenase PFAM: Aldehyde Dehydrogenase~KEGG: mxa:MXAN_5040 aldehyde dehydrogenase family protein gene gene1120 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1089 Amir_1090 Amir_1090 Amir_1090 1211972 1212346 + protein of unknown function DUF779 PFAM: protein of unknown function DUF779~KEGG: mxa:MXAN_5039 hypothetical protein gene gene1121 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1090 Amir_1091 Amir_1091 Amir_1091 1212320 1213867 - Beta-N-acetylhexosaminidase PFAM: Glycoside hydrolase%2C family 20%2C catalytic core~KEGG: cak:Caul_0293 beta-N-acetylhexosaminidase gene gene1122 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1091 Amir_1092 Amir_1092 Amir_1092 1213908 1215395 - CHAD domain containing protein PFAM: CHAD domain containing protein%3B adenylate cyclase~KEGG: reh:H16_B1017 protein of the adenylate cyclase family gene gene1123 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1092 Amir_1093 Amir_1093 Amir_1093 1215543 1216364 + hypothetical protein KEGG: mxa:MXAN_2991 adventurous gliding motility protein AglZ gene gene1124 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1093 Amir_1094 Amir_1094 Amir_1094 1216612 1217259 - conserved hypothetical protein KEGG: hypothetical protein gene gene1125 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1094 Amir_1095 Amir_1095 Amir_1095 1217352 1218302 - formyl transferase domain protein PFAM: formyl transferase domain protein~KEGG: kpe:KPK_0268 UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase gene gene1126 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1095 Amir_1096 Amir_1096 Amir_1096 1218379 1219956 + Amidohydrolase 3 PFAM: Amidohydrolase 3%3B amidohydrolase~KEGG: smd:Smed_5168 amidohydrolase 3 gene gene1127 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1096 Amir_1097 Amir_1097 Amir_1097 1220228 1220836 - hypothetical protein KEGG: scl:sce4531 hypothetical protein gene gene1128 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1097 Amir_1098 Amir_1098 Amir_1098 1221425 1222042 + Endopeptidase Clp PFAM: peptidase S14 ClpP~KEGG: dal:Dalk_1458 ATP-dependent Clp protease%2C proteolytic subunit ClpP gene gene1129 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1098 Amir_1099 Amir_1099 Amir_1099 1222098 1222727 + Endopeptidase Clp PFAM: peptidase S14 ClpP~KEGG: pmu:PM1976 ATP-dependent Clp protease proteolytic subunit gene gene1130 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1099 Amir_1100 Amir_1100 Amir_1100 1223191 1223283 + hypothetical protein gene gene1131 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1100 Amir_1101 Amir_1101 Amir_1101 1223787 1225103 + filamentation induced by cAMP protein Fic PFAM: filamentation induced by cAMP protein Fic~KEGG: pol:Bpro_0315 filamentation induced by cAMP protein Fic gene gene1132 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1101 Amir_1102 Amir_1102 Amir_1102 1225890 1227101 - transcriptional regulator%2C XRE family PFAM: helix-turn-helix domain protein~SMART: helix-turn-helix domain protein~KEGG: gur:Gura_1136 helix-turn-helix domain- containing protein gene gene1133 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1102 Amir_1103 Amir_1103 Amir_1103 1227118 1227627 - NUDIX hydrolase PFAM: NUDIX hydrolase~KEGG: bba:Bd2755 putative ATP/GTP-binding protein gene gene1134 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1103 Amir_1104 Amir_1104 Amir_1104 1227842 1228081 + hypothetical protein gene gene1135 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1104 Amir_1105 Amir_1105 Amir_1105 1228087 1228410 + hypothetical protein gene gene1136 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1105 Amir_1106 Amir_1106 Amir_1106 1228442 1229353 + aminoglycoside phosphotransferase PFAM: aminoglycoside phosphotransferase~KEGG: sal:Sala_1765 aminoglycoside phosphotransferase gene gene1137 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1106 Amir_1107 Amir_1107 Amir_1107 1229350 1230756 - hypothetical protein KEGG: ade:Adeh_3797 hypothetical protein gene gene1138 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1107 Amir_1108 Amir_1108 Amir_1108 1230943 1231323 - transcriptional regulator%2C GntR family PFAM: regulatory protein GntR HTH~SMART: regulatory protein GntR HTH~KEGG: dac:Daci_0148 histidine utilization repressor gene gene1139 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1108 Amir_1109 Amir_1109 Amir_1109 1231458 1231850 + hypothetical protein gene gene1140 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1109 Amir_1110 Amir_1110 Amir_1110 1232060 1232389 + hypothetical protein gene gene1141 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1110 Amir_1111 Amir_1111 Amir_1111 1232386 1232634 + hypothetical protein gene gene1142 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1111 Amir_1112 Amir_1112 Amir_1112 1232640 1232849 + hypothetical protein gene gene1143 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1112 Amir_1113 Amir_1113 Amir_1113 1232929 1234311 + cell divisionFtsK/SpoIIIE PFAM: cell divisionFtsK/SpoIIIE~KEGG: abu:Abu_1159 cell division protein FtsK gene gene1144 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1113 Amir_1114 Amir_1114 Amir_1114 1234308 1234730 + transcription factor WhiB PFAM: transcription factor WhiB gene gene1145 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1114 Amir_1115 Amir_1115 Amir_1115 1234746 1235456 + hypothetical protein gene gene1146 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1115 Amir_1116 Amir_1116 Amir_1116 1235465 1236775 + hypothetical protein gene gene1147 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1116 Amir_1117 Amir_1117 Amir_1117 1236772 1236951 + pseudogene gene1148 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1117 Amir_1118 Amir_1118 Amir_1118 1236951 1238105 + integrase family protein PFAM: integrase family protein~KEGG: xau:Xaut_0620 integrase family protein gene gene1149 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1118 Amir_1119 Amir_1119 Amir_1119 1238363 1239415 - transcriptional regulator%2C LacI family PFAM: periplasmic binding protein/LacI transcriptional regulator~SMART: regulatory protein LacI~KEGG: gox:GOX0577 transcriptional regulator gene gene1151 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1119 Amir_1120 Amir_1120 Amir_1120 1239473 1240663 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: rce:RC1_3733 major facilitator superfamily (MSF) transporter%2C putative gene gene1152 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1120 Amir_1121 Amir_1121 Amir_1121 1240629 1241213 - hypothetical protein gene gene1153 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1121 Amir_1122 Amir_1122 Amir_1122 1241312 1243375 + copper resistance D domain protein PFAM: copper resistance D domain protein~KEGG: csa:Csal_0081 hypothetical protein gene gene1154 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1122 Amir_1123 Amir_1123 Amir_1123 1243394 1244221 - ABC-2 type transporter PFAM: ABC-2 type transporter~KEGG: ank:AnaeK_4023 ABC-2 type transporter gene gene1155 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1123 Amir_1124 Amir_1124 Amir_1124 1244251 1245186 - daunorubicin resistance ABC transporter ATPase subunit KEGG: aeh:Mlg_2715 daunorubicin resistance ABC transporter ATPase subunit~TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit~PFAM: ABC transporter related~SMART: AAA ATPase gene gene1156 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1124 Amir_1125 Amir_1125 Amir_1125 1245171 1245803 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: scl:sce5643 TetR family transcriptional regulator gene gene1157 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1125 Amir_1126 Amir_1126 Amir_1126 1246020 1246544 + single-strand binding protein TIGRFAM: single-strand binding protein~PFAM: single-strand binding protein/Primosomal replication protein n~KEGG: ajs:Ajs_4211 single-strand binding protein gene gene1158 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1126 Amir_1127 Amir_1127 Amir_1127 1246872 1248548 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: bcs:BCAN_A1491 putative ABC transporter ATP- binding protein gene gene1159 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1127 Amir_1128 Amir_1128 Amir_1128 1248616 1253604 + hypothetical protein KEGG: apomucin gene gene1160 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1128 Amir_1129 Amir_1129 Amir_1129 1253866 1258821 + NAD-glutamate dehydrogenase PFAM: NAD-glutamate dehydrogenase~KEGG: pol:Bpro_3020 glutamate dehydrogenase (NAD) gene gene1161 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1129 Amir_1130 Amir_1130 Amir_1130 1258959 1260659 - alpha amylase catalytic region PFAM: alpha amylase catalytic region%3B glycoside hydrolase starch-binding%3B alpha amylase all-beta~SMART: alpha amylase catalytic sub domain%3B alpha amylase all-beta~KEGG: sde:Sde_2938 ATPase gene gene1162 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1130 Amir_1131 Amir_1131 Amir_1131 1260838 1261836 + transcriptional regulator%2C LacI family KEGG: aav:Aave_4199 transcriptional regulator%2C LacI family~PFAM: regulatory protein LacI%3B periplasmic binding protein/LacI transcriptional regulator~SMART: regulatory protein LacI gene gene1163 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1131 Amir_1132 Amir_1132 Amir_1132 1261967 1262407 + thioesterase superfamily protein PFAM: thioesterase superfamily protein~KEGG: xau:Xaut_1411 thioesterase superfamily protein gene gene1164 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1132 Amir_1133 Amir_1133 Amir_1133 1262400 1263026 + hypothetical protein gene gene1165 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1133 Amir_1134 Amir_1134 Amir_1134 1263090 1264685 - alpha amylase catalytic region PFAM: alpha amylase catalytic region~SMART: alpha amylase catalytic sub domain~KEGG: alpha-glucosidase%3B K01187 alpha-glucosidase gene gene1166 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1134 Amir_1135 Amir_1135 Amir_1135 1264763 1265146 - globin PFAM: globin~KEGG: bha:BH2854 hypothetical protein gene gene1167 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1135 Amir_1136 Amir_1136 Amir_1136 1265196 1266173 - MscS Mechanosensitive ion channel PFAM: MscS Mechanosensitive ion channel~KEGG: tbd:Tbd_0499 mechanosensitive ion channel gene gene1168 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1136 Amir_1137 Amir_1137 Amir_1137 1266224 1268341 - Prolyl oligopeptidase PFAM: peptidase S9A prolyl oligopeptidase domain protein beta-propeller%3B peptidase S9 prolyl oligopeptidase active site domain protein~KEGG: scl:sce8590 prolyl oligopeptidase gene gene1169 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1137 Amir_1138 Amir_1138 Amir_1138 1268495 1269157 + HNH endonuclease PFAM: HNH endonuclease~SMART: HNH nuclease~KEGG: aba:Acid345_4201 HNH endonuclease gene gene1170 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1138 Amir_1139 Amir_1139 Amir_1139 1269177 1269764 - hypothetical protein KEGG: RGD1561483%2C RGD1561483_predicted%3B similar to ankyrin repeat domain 26 gene gene1171 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1139 Amir_1140 Amir_1140 Amir_1140 1270087 1270323 + hypothetical protein gene gene1172 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1140 Amir_1141 Amir_1141 Amir_1141 1270310 1270792 + hypothetical protein gene gene1173 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1141 Amir_1142 Amir_1142 Amir_1142 1270865 1273423 - aminopeptidase N TIGRFAM: aminopeptidase N~PFAM: Peptidase M1 membrane alanine aminopeptidase~KEGG: scl:sce2331 membrane alanyl aminopeptidase gene gene1174 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1142 Amir_1143 Amir_1143 Amir_1143 1273645 1274259 + hypothetical protein gene gene1175 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1143 Amir_1144 Amir_1144 Amir_1144 1274328 1275104 - putative lipoprotein KEGG: rpi:Rpic_1101 putative lipoprotein gene gene1176 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1144 Amir_1145 Amir_1145 Amir_1145 1275115 1275600 + ribose 5-phosphate isomerase TIGRFAM: ribose 5-phosphate isomerase%3B sugar- phosphate isomerase%2C RpiB/LacA/LacB family~PFAM: Ribose/galactose isomerase~KEGG: mca:MCA0043 ribose 5-phosphate isomerase B gene gene1177 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1145 Amir_1146 Amir_1146 Amir_1146 1275600 1276274 + hypothetical protein gene gene1178 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1146 Amir_1147 Amir_1147 Amir_1147 1276267 1277070 + DNA glycosylase/AP lyase%2C H2TH DNA-binding PFAM: DNA glycosylase/AP lyase%2C H2TH DNA-binding%3B Formamidopyrimidine-DNA glycosylase catalytic domain protein~KEGG: hypothetical protein gene gene1179 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1147 Amir_1148 Amir_1148 Amir_1148 1277139 1277909 - hypothetical protein KEGG: mno:Mnod_0189 putative periplasmic ligand- binding sensor protein gene gene1180 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1148 Amir_1149 Amir_1149 Amir_1149 1278030 1279232 - acetyltransferase KEGG: scl:sce0310 acetyltransferase gene gene1181 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1149 Amir_1150 Amir_1150 Amir_1150 1279447 1280745 - hypothetical protein gene gene1182 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1150 Amir_1151 Amir_1151 Amir_1151 1281568 1282476 - transcriptional regulator%2C LysR family PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: bsu:BSU36160 hypothetical protein gene gene1185 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1151 Amir_1152 Amir_1152 Amir_1152 1283560 1284912 + trigger factor TIGRFAM: trigger factor~PFAM: trigger factor domain%3B trigger factor domain protein%3B peptidylprolyl isomerase FKBP-type~KEGG: bcr:BCAH187_A4609 trigger factor gene gene1186 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1152 Amir_1153 Amir_1153 Amir_1153 1285072 1285701 + Endopeptidase Clp PFAM: peptidase S14 ClpP~KEGG: aba:Acid345_1560 ATP-dependent Clp protease proteolytic subunit ClpP gene gene1187 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1153 Amir_1154 Amir_1154 Amir_1154 1285906 1287186 + ATP-dependent Clp protease%2C ATP-binding subunit ClpX KEGG: bcr:BCAH187_A4608 ATP-dependent Clp protease%2C ATP-binding subunit ClpX~TIGRFAM: ATP-dependent Clp protease%2C ATP-binding subunit ClpX~PFAM: ATPase AAA-2 domain protein%3B zinc finger C4 domain protein%3B AAA ATPase central domain protein~SMART: AAA ATPase gene gene1188 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1154 Amir_1155 Amir_1155 Amir_1155 1287190 1287780 + protein of unknown function DUF1234 PFAM: protein of unknown function DUF1234~KEGG: nis:NIS_1664 hypothetical protein gene gene1189 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1155 Amir_1156 Amir_1156 Amir_1156 1287802 1288710 - putative esterase PFAM: putative esterase~KEGG: endo-1%2C4-beta-xylanase gene gene1190 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1156 Amir_1157 Amir_1157 Amir_1157 1288906 1289730 - formate dehydrogenase family accessory protein FdhD TIGRFAM: formate dehydrogenase family accessory protein FdhD~PFAM: formate dehydrogenase subunit FdhD~KEGG: ade:Adeh_0826 formate dehydrogenase family accessory protein FdhD gene gene1191 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1157 Amir_1158 Amir_1158 Amir_1158 1289798 1291144 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: nma:NMA1574 putative integral membrane transporter gene gene1192 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1158 Amir_1159 Amir_1159 Amir_1159 1291141 1291293 + hypothetical protein gene gene1193 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1159 Amir_1160 Amir_1160 Amir_1160 1291305 1292855 + FAD dependent oxidoreductase PFAM: FAD dependent oxidoreductase~KEGG: acp:A2cp1_3444 amine oxidase gene gene1194 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1160 Amir_1161 Amir_1161 Amir_1161 1292852 1293358 - hypothetical protein gene gene1195 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1161 Amir_1162 Amir_1162 Amir_1162 1293355 1295646 - oxidoreductase alpha (molybdopterin) subunit KEGG: mxa:MXAN_4341 oxidoreductase alpha (molybdopterin) subunit~TIGRFAM: oxidoreductase alpha (molybdopterin) subunit~PFAM: molybdopterin oxidoreductase%3B molydopterin dinucleotide-binding region gene gene1196 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1162 Amir_1163 Amir_1163 Amir_1163 1295657 1296070 - hypothetical protein gene gene1197 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1163 Amir_1164 Amir_1164 Amir_1164 1296419 1297438 - hypothetical protein KEGG: ade:Adeh_3310 zinc finger/thioredoxin putative gene gene1198 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1164 Amir_1165 Amir_1165 Amir_1165 1297729 1300362 + valyl-tRNA synthetase TIGRFAM: valyl-tRNA synthetase~KEGG: gsu:GSU2045 valyl-tRNA synthetase gene gene1199 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1165 Amir_1166 Amir_1166 Amir_1166 1300362 1301720 + FolC bifunctional protein TIGRFAM: FolC bifunctional protein~PFAM: cytoplasmic peptidoglycan synthetase domain protein%3B Mur ligase middle domain protein~KEGG: gme:Gmet_2475 folylpolyglutamate synthetase gene gene1200 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1166 Amir_1167 Amir_1167 Amir_1167 1301717 1302172 + hypothetical protein gene gene1201 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1167 Amir_1168 Amir_1168 Amir_1168 1302376 1302510 + hypothetical protein gene gene1202 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1168 Amir_1169 Amir_1169 Amir_1169 1302675 1303768 + pseudogene gene1203 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1169 Amir_1170 Amir_1170 Amir_1170 1303945 1309512 + alpha-1%2C6-glucosidase%2C pullulanase-type KEGG: aba:Acid345_2329 alpha-1%2C6-glucosidases%2C pullulanase-type~TIGRFAM: alpha-1%2C6-glucosidase%2C pullulanase-type~PFAM: alpha amylase catalytic region%3B pullanase- associated protein%3B glycoside hydrolase family 13 domain protein~SMART: alpha amylase catalytic sub domain gene gene1204 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1170 Amir_1171 Amir_1171 Amir_1171 1309544 1310188 - hypothetical protein gene gene1205 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1171 Amir_1172 Amir_1172 Amir_1172 1310265 1310675 + Nucleoside-diphosphate kinase KEGG: bsu:BSU22730 nucleoside diphosphate kinase~PFAM: nucleoside diphosphate kinase~SMART: nucleoside diphosphate kinase gene gene1206 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1172 Amir_1173 Amir_1173 Amir_1173 1310810 1311730 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: mgm:Mmc1_3306 ABC transporter related gene gene1207 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1173 Amir_1174 Amir_1174 Amir_1174 1311730 1312566 + ABC-2 type transporter PFAM: ABC-2 type transporter~KEGG: hha:Hhal_0239 ABC-2 type transporter%2C NodJ family gene gene1208 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1174 Amir_1175 Amir_1175 Amir_1175 1312563 1313369 + ABC-2 type transporter PFAM: ABC-2 type transporter~KEGG: afr:AFE_3235 ABC-2 type transporter%2C permease protein%2C NodJ family gene gene1209 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1175 Amir_1176 Amir_1176 Amir_1176 1313403 1315370 + Radical SAM domain protein PFAM: Radical SAM domain protein~SMART: Elongator protein 3/MiaB/NifB~KEGG: pca:Pcar_2585 Fe-S oxidoreductase gene gene1210 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1176 Amir_1177 Amir_1177 Amir_1177 1315762 1316313 + RNA polymerase%2C sigma-24 subunit%2C ECF subfamily TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family~PFAM: sigma-70 region 2 domain protein%3B Sigma-70 region 4 type 2%3B sigma-70 region 4 domain protein~KEGG: aba:Acid345_1825 sigma-24%2C ECF subfamily gene gene1211 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1177 Amir_1178 Amir_1178 Amir_1178 1316811 1320125 + transcriptional regulator%2C LuxR family PFAM: regulatory protein LuxR%3B Tetratricopeptide TPR_4%3B Tetratricopeptide TPR_2 repeat protein~SMART: regulatory protein LuxR%3B Tetratricopeptide domain protein~KEGG: ade:Adeh_3797 hypothetical protein gene gene1212 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1178 Amir_1179 Amir_1179 Amir_1179 1320198 1320562 - pseudogene gene1213 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1179 Amir_1180 Amir_1180 Amir_1180 1320622 1321083 - pseudogene gene1214 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1180 Amir_1181 Amir_1181 Amir_1181 1321093 1321632 - Ferric reductase domain protein transmembrane component domain PFAM: Ferric reductase domain protein transmembrane component domain~KEGG: prw:PsycPRwf_0697 ferric reductase-like protein gene gene1215 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1181 Amir_1182 Amir_1182 Amir_1182 1321629 1322525 - ApbE family lipoprotein PFAM: ApbE family lipoprotein~KEGG: mca:MCA2411 thiamine biosynthesis lipoprotein ApbE%2C putative gene gene1216 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1182 Amir_1183 Amir_1183 Amir_1183 1322534 1322944 - hypothetical protein KEGG: HYR10%3B hyphally-regulated cell wall protein gene gene1217 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1183 Amir_1184 Amir_1184 Amir_1184 1323018 1324721 - peptidase S8 and S53 subtilisin kexin sedolisin PFAM: peptidase S8 and S53 subtilisin kexin sedolisin~KEGG: acp:A2cp1_0256 peptidase S8 and S53 subtilisin kexin sedolisin gene gene1218 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1184 Amir_1185 Amir_1185 Amir_1185 1324981 1325721 + conserved hypothetical protein KEGG: glo:Glov_0470 radical SAM domain protein gene gene1219 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1185 Amir_1186 Amir_1186 Amir_1186 1325914 1328838 + ribonuclease%2C Rne/Rng family KEGG: sde:Sde_3188 RNAse G~TIGRFAM: ribonuclease%2C Rne/Rng family~PFAM: translation initiation factor IF-2 domain protein~SMART: RNA binding S1 domain protein gene gene1220 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1186 Amir_1187 Amir_1187 Amir_1187 1329415 1329726 + ribosomal protein L21 TIGRFAM: ribosomal protein L21~PFAM: ribosomal protein L21~KEGG: tbd:Tbd_0864 50S ribosomal protein L21P gene gene1221 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1187 Amir_1188 Amir_1188 Amir_1188 1329741 1330004 + ribosomal protein L27 TIGRFAM: ribosomal protein L27~PFAM: ribosomal protein L27~KEGG: smt:Smal_1120 ribosomal protein L27 gene gene1222 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1188 Amir_1189 Amir_1189 Amir_1189 1330117 1331583 + GTP-binding protein Obg/CgtA TIGRFAM: GTP-binding protein Obg/CgtA%3B small GTP- binding protein~PFAM: GTP1/OBG sub domain protein%3B GTP-binding protein HSR1-related%3B GTP1/OBG domain protein~KEGG: bsu:BSU27920 GTPase ObgE gene gene1223 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1189 Amir_1190 Amir_1190 Amir_1190 1331586 1332716 + glutamate 5-kinase KEGG: mxa:MXAN_1357 glutamate 5-kinase~TIGRFAM: glutamate 5-kinase~PFAM: aspartate/glutamate/uridylate kinase%3B PUA domain containing protein~SMART: PUA domain containing protein gene gene1224 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1190 Amir_1191 Amir_1191 Amir_1191 1332889 1334169 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1%3B General substrate transporter~KEGG: bav:BAV1823 alpha-ketoglutarate permease gene gene1225 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1191 Amir_1192 Amir_1192 Amir_1192 1334248 1334793 - GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: bpl:BURPS1106A_2024 acetyltransferase gene gene1226 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1192 Amir_1193 Amir_1193 Amir_1193 1335135 1337210 - ATP-dependent DNA helicase%2C RecQ family KEGG: maq:Maqu_0559 ATP-dependent DNA helicase RecQ~TIGRFAM: ATP-dependent DNA helicase%2C RecQ family~PFAM: DEAD/DEAH box helicase domain protein%3B helicase domain protein~SMART: DEAD-like helicase%3B helicase domain protein gene gene1227 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1193 Amir_1194 Amir_1194 Amir_1194 1337301 1338563 + gamma-glutamyl phosphate reductase KEGG: rce:RC1_1913 gamma-glutamyl phosphate reductase~TIGRFAM: gamma-glutamyl phosphate reductase~PFAM: Aldehyde Dehydrogenase gene gene1228 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1194 Amir_1195 Amir_1195 Amir_1195 1338679 1339863 + cytochrome P450 PFAM: cytochrome P450~KEGG: scl:sce8913 cytochrome P450 CYP109C2 gene gene1229 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1195 Amir_1196 Amir_1196 Amir_1196 1339866 1340087 + hypothetical protein KEGG: bha:BH1605 ferredoxin gene gene1230 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1196 Amir_1197 Amir_1197 Amir_1197 1340162 1340755 + nicotinate (nicotinamide) nucleotide adenylyltransferase KEGG: bsu:BSU25640 nicotinic acid mononucleotide adenylyltransferase~TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase%3B cytidyltransferase-related domain protein~PFAM: cytidylyltransferase gene gene1231 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1197 Amir_1198 Amir_1198 Amir_1198 1340880 1341326 + iojap-like protein TIGRFAM: iojap-like protein~PFAM: Iojap-related protein~KEGG: ank:AnaeK_0226 iojap-like protein gene gene1232 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1198 Amir_1199 Amir_1199 Amir_1199 1341323 1341937 + Phosphoglycerate mutase PFAM: Phosphoglycerate mutase~KEGG: reh:H16_A0493 phosphoglycerate mutase 2 protein gene gene1233 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1199 Amir_1200 Amir_1200 Amir_1200 1341934 1342665 + hypothetical protein gene gene1234 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1200 Amir_1201 Amir_1201 Amir_1201 1342677 1343519 + degV family protein TIGRFAM: degV family protein~PFAM: DegV family protein~KEGG: bsu:BSU35480 hypothetical protein gene gene1235 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1201 Amir_1202 Amir_1202 Amir_1202 1343627 1344355 + competence protein ComEA helix-hairpin-helix repeat protein TIGRFAM: competence protein ComEA helix-hairpin- helix repeat protein~PFAM: helix-hairpin-helix motif~KEGG: bsu:BSU25590 unspecific high-affinity DNA- binding protein gene gene1236 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1202 Amir_1203 Amir_1203 Amir_1203 1344723 1347035 + DNA internalization-related competence protein ComEC/Rec2 TIGRFAM: DNA internalization-related competence protein ComEC/Rec2%3B ComEC/Rec2-related protein~PFAM: ComEC/Rec2-related protein%3B beta-lactamase domain protein~KEGG: ank:AnaeK_2593 DNA internalization-related competence protein ComEC/Rec2 gene gene1237 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1203 Amir_1204 Amir_1204 Amir_1204 1347105 1347572 + hypothetical protein gene gene1238 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1204 Amir_1205 Amir_1205 Amir_1205 1348001 1349266 - threonine synthase TIGRFAM: threonine synthase~PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit~KEGG: afw:Anae109_3605 threonine synthase gene gene1239 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1205 Amir_1206 Amir_1206 Amir_1206 1349509 1350477 + DNA polymerase III%2C delta subunit TIGRFAM: DNA polymerase III%2C delta subunit~PFAM: DNA polymerase III delta~KEGG: gbm:Gbem_0755 DNA polymerase III%2C delta subunit gene gene1240 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1206 Amir_1207 Amir_1207 Amir_1207 1351197 1351457 - ribosomal protein S20 TIGRFAM: ribosomal protein S20~PFAM: ribosomal protein S20~KEGG: bha:BH1339 30S ribosomal protein S20 gene gene1241 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1207 Amir_1208 Amir_1208 Amir_1208 1351726 1352529 + protein of unknown function DUF81 PFAM: protein of unknown function DUF81~KEGG: ppg:PputGB1_3567 hypothetical protein gene gene1242 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1208 Amir_1209 Amir_1209 Amir_1209 1352498 1353268 - Glyoxalase/bleomycin resistance protein/dioxygenase PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase~KEGG: sfr:Sfri_0263 glyoxalase/bleomycin resistance protein/dioxygenase gene gene1243 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1209 Amir_1210 Amir_1210 Amir_1210 1353558 1353821 - hypothetical protein KEGG: sal:Sala_0218 hypothetical protein gene gene1244 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1210 Amir_1211 Amir_1211 Amir_1211 1353823 1354740 - band 7 protein PFAM: band 7 protein~SMART: band 7 protein~KEGG: sml:Smlt1263 putative transmembrane protein gene gene1245 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1211 Amir_1212 Amir_1212 Amir_1212 1354882 1355235 + hypothetical protein gene gene1246 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1212 Amir_1213 Amir_1213 Amir_1213 1355645 1357306 + protein of unknown function DUF404 PFAM: protein of unknown function DUF404%3B protein of unknown function DUF407~KEGG: aba:Acid345_3320 protein of unknown function DUF404 gene gene1247 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1213 Amir_1214 Amir_1214 Amir_1214 1357306 1358250 + protein of unknown function DUF403 PFAM: protein of unknown function DUF403~KEGG: aba:Acid345_3319 protein of unknown function DUF403 gene gene1248 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1214 Amir_1215 Amir_1215 Amir_1215 1358251 1359093 + transglutaminase domain protein PFAM: transglutaminase domain protein%3B transglutaminase domain protein~SMART: transglutaminase domain protein~KEGG: ccs:CCNA_01672 transglutaminase-like enzyme%2C putative cysteine gene gene1249 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1215 Amir_1216 Amir_1216 Amir_1216 1359587 1361428 - GTP-binding protein LepA TIGRFAM: GTP-binding protein LepA%3B small GTP- binding protein~PFAM: GTP-binding protein LepA domain protein%3B elongation factor G domain protein%3B elongation factor Tu domain 2 protein%3B protein synthesis factor GTP-binding~KEGG: bcy:Bcer98_3046 GTP-binding protein LepA gene gene1250 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1216 Amir_1217 Amir_1217 Amir_1217 1361535 1361978 + hypothetical protein gene gene1251 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1217 Amir_1218 Amir_1218 Amir_1218 1362127 1362345 - hypothetical protein gene gene1252 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1218 Amir_1219 Amir_1219 Amir_1219 1362457 1362888 - conserved hypothetical protein KEGG: pen:PSEEN1948 hypothetical protein gene gene1253 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1219 Amir_1220 Amir_1220 Amir_1220 1363011 1364543 + Carbohydrate-binding CenC domain protein PFAM: Carbohydrate-binding CenC domain protein%3B glycoside hydrolase family 18~SMART: chitinase II~KEGG: cja:CJA_2993 endo-chitinase%2C putative%2C chi18C gene gene1254 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1220 Amir_1221 Amir_1221 Amir_1221 1364625 1365668 + 2-nitropropane dioxygenase NPD PFAM: 2-nitropropane dioxygenase NPD~KEGG: bpt:Bpet3829 putative 2-nitropropane dioxygenase gene gene1255 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1221 Amir_1222 Amir_1222 Amir_1222 1365699 1367339 + protein of unknown function DUF885 PFAM: protein of unknown function DUF885~KEGG: sal:Sala_0679 hypothetical protein gene gene1256 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1222 Amir_1223 Amir_1223 Amir_1223 1367331 1368803 - amino acid permease-associated region PFAM: amino acid permease-associated region~KEGG: bsu:BSU07340 hypothetical protein gene gene1257 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1223 Amir_1224 Amir_1224 Amir_1224 1369041 1369808 + Enoyl-CoA hydratase/isomerase PFAM: Enoyl-CoA hydratase/isomerase~KEGG: reu:Reut_A1464 enoyl-CoA hydratase gene gene1258 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1224 Amir_1225 Amir_1225 Amir_1225 1369842 1370810 - Alcohol dehydrogenase zinc-binding domain protein PFAM: Alcohol dehydrogenase zinc-binding domain protein%3B Alcohol dehydrogenase GroES domain protein~KEGG: xcv:XCV2170 putative oxidoreductase gene gene1259 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1225 Amir_1226 Amir_1226 Amir_1226 1370877 1371125 + hypothetical protein gene gene1260 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1226 Amir_1227 Amir_1227 Amir_1227 1371135 1371575 + guanine-specific ribonuclease N1 and T1 PFAM: guanine-specific ribonuclease N1 and T1~KEGG: tmz:Tmz1t_1168 guanine-specific ribonuclease N1 and T1 gene gene1261 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1227 Amir_1228 Amir_1228 Amir_1228 1371572 1371910 + Barstar (barnase inhibitor) PFAM: Barstar (barnase inhibitor)~KEGG: tmz:Tmz1t_1167 barstar (barnase inhibitor) gene gene1262 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1228 Amir_1229 Amir_1229 Amir_1229 1372023 1372244 + protein of unknown function UPF0150 PFAM: protein of unknown function UPF0150~KEGG: dar:Daro_3012 hypothetical protein gene gene1263 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1229 Amir_1230 Amir_1230 Amir_1230 1372241 1372462 + YcfA family protein PFAM: YcfA family protein~KEGG: abu:Abu_0898 hypothetical protein gene gene1264 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1230 Amir_1231 Amir_1231 Amir_1231 1372542 1373258 - cobalamin (vitamin B12) biosynthesis CbiX protein PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein~KEGG: cvi:CV_1567 precorrin-8X methylmutase gene gene1265 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1231 Amir_1232 Amir_1232 Amir_1232 1373267 1374226 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: aba:Acid345_0827 ABC aliphatic sulfonate transporter%2C inner membrane subunit gene gene1266 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1232 Amir_1233 Amir_1233 Amir_1233 1374207 1374995 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: aba:Acid345_0826 ABC transporter%2C ATPase subunit gene gene1267 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1233 Amir_1234 Amir_1234 Amir_1234 1375026 1376084 - aliphatic sulfonates family ABC transporter%2C periplsmic ligand-binding protein TIGRFAM: aliphatic sulfonates family ABC transporter%2C periplsmic ligand-binding protein~KEGG: afw:Anae109_0427 aliphatic sulfonate ABC transporter periplasmic ligand-binding protein gene gene1268 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1234 Amir_1235 Amir_1235 Amir_1235 1376144 1377478 - sulfate adenylyltransferase%2C large subunit KEGG: afw:Anae109_1643 sulfate adenylyltransferase%2C large subunit~TIGRFAM: sulfate adenylyltransferase%2C large subunit~PFAM: protein synthesis factor GTP-binding%3B elongation factor Tu domain 2 protein gene gene1269 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1235 Amir_1236 Amir_1236 Amir_1236 1377479 1378378 - sulfate adenylyltransferase%2C small subunit TIGRFAM: sulfate adenylyltransferase%2C small subunit~PFAM: phosphoadenosine phosphosulfate reductase~KEGG: noc:Noc_2289 sulfate adenylyltransferase subunit 2 gene gene1270 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1236 Amir_1237 Amir_1237 Amir_1237 1378375 1379070 - adenylylsulfate reductase%2C thioredoxin dependent TIGRFAM: adenylylsulfate reductase%2C thioredoxin dependent%3B phosphoadenosine phosphosulfate reductase~PFAM: phosphoadenosine phosphosulfate reductase~KEGG: bsu:BSU15570 phosphoadenosine phosphosulfate gene gene1271 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1237 Amir_1238 Amir_1238 Amir_1238 1379067 1379225 - hypothetical protein gene gene1272 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1238 Amir_1239 Amir_1239 Amir_1239 1379222 1380934 - Sulfite reductase (ferredoxin) PFAM: nitrite and sulphite reductase 4Fe-4S region%3B nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein~KEGG: aba:Acid345_2373 nitrite/sulfite reductase%2C hemoprotein beta-component%2C ferrodoxin-like gene gene1273 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1239 Amir_1240 Amir_1240 Amir_1240 1381347 1382561 + oxygen-independent coproporphyrinogen III oxidase KEGG: mag:amb4500 coproporphyrinogen III oxidase~TIGRFAM: oxygen-independent coproporphyrinogen III oxidase~PFAM: Radical SAM domain protein%3B HemN domain protein~SMART: Elongator protein 3/MiaB/NifB gene gene1274 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1240 Amir_1241 Amir_1241 Amir_1241 1383074 1384096 + heat-inducible transcription repressor HrcA TIGRFAM: heat-inducible transcription repressor HrcA~PFAM: Negative regulator of class I heat shock protein%3B regulatory protein DeoR~KEGG: gme:Gmet_3534 heat-inducible transcription repressor HrcA gene gene1275 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1241 Amir_1242 Amir_1242 Amir_1242 1384183 1385337 + chaperone DnaJ domain protein PFAM: chaperone DnaJ domain protein%3B DnaJ central domain protein%3B heat shock protein DnaJ domain protein~SMART: heat shock protein DnaJ domain protein~KEGG: afr:AFE_2664 chaperone protein DnaJ gene gene1276 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1242 Amir_1243 Amir_1243 Amir_1243 1385334 1386068 + protein of unknown function DUF558 PFAM: protein of unknown function DUF558~KEGG: xca:xccb100_1268 hypothetical protein gene gene1277 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1243 Amir_1244 Amir_1244 Amir_1244 1386261 1387475 - lipolytic protein G-D-S-L family PFAM: lipolytic protein G-D-S-L family~KEGG: scl:sce5221 hypothetical protein gene gene1278 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1244 Amir_1245 Amir_1245 Amir_1245 1387590 1388834 - lipolytic protein G-D-S-L family PFAM: lipolytic protein G-D-S-L family~KEGG: scl:sce5221 hypothetical protein gene gene1279 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1245 Amir_1246 Amir_1246 Amir_1246 1389005 1389670 + conserved hypothetical protein KEGG: mxa:MXAN_0913 hypothetical protein gene gene1280 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1246 Amir_1247 Amir_1247 Amir_1247 1389680 1390021 + histidine triad (HIT) protein PFAM: histidine triad (HIT) protein~KEGG: afw:Anae109_0197 histidine triad (HIT) protein gene gene1281 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1247 Amir_1248 Amir_1248 Amir_1248 1390034 1390825 - GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: atc:AGR_L_2832 hypothetical protein gene gene1282 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1248 Amir_1249 Amir_1249 Amir_1249 1390958 1392922 + PhoH family protein PFAM: PhoH family protein~SMART: Hedgehog/intein hint domain protein~KEGG: mxa:MXAN_4738 PhoH family protein gene gene1283 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1249 Amir_1250 Amir_1250 Amir_1250 1392928 1393491 + protein of unknown function UPF0054 PFAM: protein of unknown function UPF0054~KEGG: bsu:BSU25320 putative metalloprotease gene gene1284 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1250 Amir_1251 Amir_1251 Amir_1251 1393502 1394809 + CBS domain-containing protein PFAM: CBS domain containing protein%3B protein of unknown function DUF21%3B transporter-associated region~SMART: CBS domain containing protein~KEGG: scl:sce4286 hypothetical protein gene gene1285 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1251 Amir_1252 Amir_1252 Amir_1252 1394802 1395134 + cytidine deaminase KEGG: acp:A2cp1_0654 cytidine deaminase gene gene1286 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1252 Amir_1253 Amir_1253 Amir_1253 1395135 1395479 + hypothetical protein KEGG: net:Neut_1332 putative ferredoxin 2fe-2s protein gene gene1287 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1253 Amir_1254 Amir_1254 Amir_1254 1396007 1396903 + GTP-binding protein Era TIGRFAM: GTP-binding protein Era%3B small GTP-binding protein~PFAM: GTP-binding protein HSR1-related%3B KH type 2 domain protein~KEGG: bcr:BCAH187_A4433 GTP-binding protein Era gene gene1288 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1254 Amir_1255 Amir_1255 Amir_1255 1396904 1397656 + DNA repair protein RecO TIGRFAM: DNA repair protein RecO~PFAM: Recombination protein O RecO~KEGG: ank:AnaeK_2557 DNA repair protein RecO gene gene1289 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1255 Amir_1256 Amir_1256 Amir_1256 1397691 1398557 + undecaprenyl diphosphate synthase KEGG: acr:Acry_2555 undecaprenyl diphosphate synthase~TIGRFAM: undecaprenyl diphosphate synthase~PFAM: Di-trans-poly-cis-decaprenylcistransferase gene gene1290 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1256 Amir_1257 Amir_1257 Amir_1257 1398554 1398982 + hypothetical protein gene gene1291 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1257 Amir_1258 Amir_1258 Amir_1258 1398985 1399269 + hypothetical protein gene gene1292 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1258 Amir_1259 Amir_1259 Amir_1259 1399357 1400361 + permease PFAM: permease~KEGG: bcy:Bcer98_1540 permease gene gene1293 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1259 Amir_1260 Amir_1260 Amir_1260 1400358 1401101 + hypothetical protein KEGG: bcy:Bcer98_1541 hypothetical protein gene gene1294 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1260 Amir_1261 Amir_1261 Amir_1261 1401185 1401610 - ferric uptake regulator%2C Fur family PFAM: ferric-uptake regulator~KEGG: gur:Gura_3002 ferric uptake regulator family protein gene gene1295 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1261 Amir_1262 Amir_1262 Amir_1262 1401607 1402008 - transcriptional regulator%2C ArsR family PFAM: regulatory protein ArsR~SMART: regulatory protein ArsR~KEGG: pla:Plav_2471 regulatory protein ArsR gene gene1296 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1262 Amir_1263 Amir_1263 Amir_1263 1402192 1402575 + Antibiotic biosynthesis monooxygenase PFAM: Antibiotic biosynthesis monooxygenase gene gene1297 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1263 Amir_1264 Amir_1264 Amir_1264 1403437 1403655 + hypothetical protein gene gene1298 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1264 Amir_1265 Amir_1265 Amir_1265 1403717 1404079 + hypothetical protein gene gene1299 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1265 Amir_1266 Amir_1266 Amir_1266 1404226 1405611 + glycyl-tRNA synthetase TIGRFAM: glycyl-tRNA synthetase~PFAM: tRNA synthetase class II (G H P and S)%3B Anticodon-binding domain protein~KEGG: bba:Bd1147 glycyl-tRNA synthetase gene gene1300 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1266 Amir_1267 Amir_1267 Amir_1267 1405985 1406311 + hypothetical protein gene gene1301 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1267 Amir_1268 Amir_1268 Amir_1268 1406406 1407041 + Carbonate dehydratase PFAM: carbonic anhydrase~KEGG: bac:BamMC406_5701 carbonate dehydratase gene gene1302 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1268 Amir_1269 Amir_1269 Amir_1269 1407128 1408585 + sulphate transporter PFAM: sulphate transporter%3B Xanthine/uracil/vitamin C permease~KEGG: psa:PST_4161 probable sulfate transporter gene gene1303 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1269 Amir_1270 Amir_1270 Amir_1270 1408642 1409697 - proteinase inhibitor I4 serpin PFAM: proteinase inhibitor I4 serpin~SMART: proteinase inhibitor I4 serpin~KEGG: scl:sce5377 hypothetical protein gene gene1304 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1270 Amir_1271 Amir_1271 Amir_1271 1409766 1411016 - deoxyguanosinetriphosphate triphosphohydrolase KEGG: aba:Acid345_0225 deoxyguanosinetriphosphate triphosphohydrolase~TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase~PFAM: metal-dependent phosphohydrolase HD sub domain~SMART: metal-dependent phosphohydrolase HD region gene gene1305 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1271 Amir_1272 Amir_1272 Amir_1272 1411087 1411725 - protein of unknown function DUF218 PFAM: protein of unknown function DUF218~KEGG: aba:Acid345_2611 protein of unknown function DUF218 gene gene1306 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1272 Amir_1273 Amir_1273 Amir_1273 1411882 1412607 + peptidase S51 dipeptidase E PFAM: peptidase S51 dipeptidase E~KEGG: bsu:BSU08780 hypothetical protein gene gene1307 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1273 Amir_1274 Amir_1274 Amir_1274 1412633 1413622 - RNA polymerase%2C sigma-24 subunit%2C ECF subfamily TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family~PFAM: sigma-70 region 2 domain protein%3B Sigma-70 region 4 type 2~KEGG: mno:Mnod_3704 RNA polymerase%2C sigma-24 subunit%2C ECF subfamily gene gene1308 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1274 Amir_1275 Amir_1275 Amir_1275 1413651 1415540 + DNA primase KEGG: DNA primase%3B K02316 DNA primase~TIGRFAM: DNA primase~PFAM: DNA primase catalytic core domain%3B zinc finger CHC2-family protein%3B TOPRIM domain protein%3B DNA primase DnaG DnaB-binding~SMART: zinc finger CHC2-family protein%3B DNA primase DnaG DnaB-binding%3B Toprim sub domain protein gene gene1309 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1275 Amir_1276 Amir_1276 Amir_1276 1415610 1416149 + hypothetical protein KEGG: reu:Reut_A2115 DNA helicase/exodeoxyribonuclease V%2C subunit B gene gene1310 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1276 Amir_1277 Amir_1277 Amir_1277 1416723 1416953 - hypothetical protein gene gene1311 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1277 Amir_1278 Amir_1278 Amir_1278 1417386 1417943 + NUDIX hydrolase PFAM: NUDIX hydrolase~KEGG: kpn:KPN_04028 hypothetical protein gene gene1312 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1278 Amir_1279 Amir_1279 Amir_1279 1417952 1418599 - protein of unknown function DUF218 PFAM: protein of unknown function DUF218~KEGG: ppr:PBPRB0680 hypothetical protein gene gene1313 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1279 Amir_1280 Amir_1280 Amir_1280 1418628 1419329 - transcriptional regulator%2C GntR family PFAM: UbiC transcription regulator-associated domain protein%3B regulatory protein GntR HTH~SMART: regulatory protein GntR HTH~KEGG: rme:Rmet_2856 transcriptional regulator%2C histidine utilization repressor%2C GntR family gene gene1314 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1280 Amir_1281 Amir_1281 Amir_1281 1419402 1420661 - transcriptional regulator%2C XRE family PFAM: helix-turn-helix domain protein~SMART: helix-turn-helix domain protein~KEGG: afw:Anae109_2699 response regulator receiver gene gene1315 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1281 Amir_1282 Amir_1282 Amir_1282 1420673 1421083 - NUDIX hydrolase PFAM: NUDIX hydrolase~KEGG: rpi:Rpic_3754 NUDIX hydrolase gene gene1316 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1282 Amir_1283 Amir_1283 Amir_1283 1421239 1421991 + Taurine catabolism dioxygenase TauD/TfdA PFAM: Taurine catabolism dioxygenase TauD/TfdA~KEGG: hypothetical protein gene gene1317 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1283 Amir_1284 Amir_1284 Amir_1284 1422483 1423250 + transcriptional regulator%2C GntR family PFAM: UbiC transcription regulator-associated domain protein%3B regulatory protein GntR HTH~SMART: regulatory protein GntR HTH~KEGG: dar:Daro_2866 GntR family transcriptional regulator gene gene1318 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1284 Amir_1285 Amir_1285 Amir_1285 1423390 1423722 + hypothetical protein gene gene1319 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1285 Amir_1286 Amir_1286 Amir_1286 1423975 1424244 + hypothetical protein gene gene1320 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1286 Amir_1287 Amir_1287 Amir_1287 1424246 1424437 + hypothetical protein gene gene1321 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1287 Amir_1288 Amir_1288 Amir_1288 1424529 1425899 + cell divisionFtsK/SpoIIIE PFAM: cell divisionFtsK/SpoIIIE~KEGG: bac:BamMC406_0006 cell divisionFtsK/SpoIIIE gene gene1322 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1288 Amir_1289 Amir_1289 Amir_1289 1425970 1426185 + hypothetical protein gene gene1323 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1289 Amir_1290 Amir_1290 Amir_1290 1426182 1427096 + hypothetical protein KEGG: hypothetical protein%3B K11233 osomolarity two- component system%2C response regulator SSK1 gene gene1324 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1290 Amir_1291 Amir_1291 Amir_1291 1427123 1427620 + hypothetical protein gene gene1325 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1291 Amir_1292 Amir_1292 Amir_1292 1427716 1429059 + hypothetical protein gene gene1326 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1292 Amir_1293 Amir_1293 Amir_1293 1429056 1429235 + regulatory protein MerR PFAM: regulatory protein MerR~KEGG: nwi:Nwi_0824 hypothetical protein gene gene1327 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1293 Amir_1294 Amir_1294 Amir_1294 1429235 1430416 + integrase family protein PFAM: integrase family protein~KEGG: bat:BAS0415 prophage LambdaBa04%2C site- specific recombinase phage integrase family protein protein gene gene1328 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1294 Amir_1295 Amir_1295 Amir_1295 1430635 1431480 - conserved hypothetical protein KEGG: scl:sce5771 hypothetical protein gene gene1330 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1295 Amir_1296 Amir_1296 Amir_1296 1431847 1432089 + hypothetical protein gene gene1332 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1296 Amir_1297 Amir_1297 Amir_1297 1432109 1432858 - Trans-aconitate 2-methyltransferase PFAM: Methyltransferase type 11%3B Methyltransferase type 12~KEGG: mxa:MXAN_6659 trans-aconitate methyltransferase gene gene1333 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1297 Amir_1298 Amir_1298 Amir_1298 1432995 1433408 + hypothetical protein gene gene1334 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1298 Amir_1299 Amir_1299 Amir_1299 1433548 1434570 - cell envelope-related transcriptional attenuator TIGRFAM: cell envelope-related function transcriptional attenuator%2C LytR/CpsA family~PFAM: cell envelope-related transcriptional attenuator~KEGG: bce:BC5265 membrane-bound transcriptional regulator LytR gene gene1335 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1299 Amir_1300 Amir_1300 Amir_1300 1434624 1435049 + conserved hypothetical protein KEGG: afw:Anae109_0856 hypothetical protein gene gene1336 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1300 Amir_1301 Amir_1301 Amir_1301 1435129 1437042 + glycosyl transferase family 2 PFAM: glycosyl transferase family 2%3B polysaccharide deacetylase~KEGG: mno:Mnod_3023 polysaccharide deacetylase gene gene1337 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1301 Amir_1302 Amir_1302 Amir_1302 1437100 1438302 - cytochrome P450 PFAM: cytochrome P450~KEGG: bxe:Bxe_C0945 putative cytochrome P450 gene gene1338 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1302 Amir_1303 Amir_1303 Amir_1303 1438928 1440088 + Nitric-oxide synthase PFAM: Nitric oxide synthase NOS~KEGG: scl:sce1582 nitric-oxide synthase%2C oxygenase subunit gene gene1339 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1303 Amir_1304 Amir_1304 Amir_1304 1440187 1441296 + alanine dehydrogenase/PNT domain protein PFAM: alanine dehydrogenase/PNT domain protein~KEGG: eba:ebA4497 pyridine nucleotide transhydrogenase alpha subunit gene gene1340 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1304 Amir_1305 Amir_1305 Amir_1305 1441325 1441693 - hypothetical protein gene gene1341 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1305 Amir_1306 Amir_1306 Amir_1306 1441947 1444025 - diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) KEGG: dvm:DvMF_0211 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)~TIGRFAM: diguanylate cyclase%3B PAS sensor protein~PFAM: GGDEF domain containing protein%3B EAL domain protein%3B PAS fold-3 domain protein%3B PAS fold domain protein%3B PAS fold-4 domain protein~SMART: GGDEF domain containing protein%3B EAL domain protein%3B PAS domain containing protein gene gene1342 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1306 Amir_1307 Amir_1307 Amir_1307 1444032 1444856 - protein of unknown function DUF574 PFAM: protein of unknown function DUF574%3B Methyltransferase type 12~KEGG: scl:sce6070 hypothetical protein gene gene1343 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1307 Amir_1308 Amir_1308 Amir_1308 1445048 1445617 + transcriptional regulator%2C MarR family PFAM: regulatory protein MarR~SMART: regulatory protein MarR~KEGG: bmj:BMULJ_04432 MarR family transcriptional regulator gene gene1344 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1308 Amir_1309 Amir_1309 Amir_1309 1445668 1446042 + Camphor resistance CrcB protein PFAM: Camphor resistance CrcB protein~KEGG: eli:ELI_01350 hypothetical protein gene gene1345 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1309 Amir_1310 Amir_1310 Amir_1310 1446039 1446383 + CrcB protein TIGRFAM: CrcB protein~PFAM: Camphor resistance CrcB protein~KEGG: smd:Smed_1020 CrcB protein gene gene1346 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1310 Amir_1311 Amir_1311 Amir_1311 1446409 1448655 - superfamily I DNA and RNA helicase-like protein KEGG: bcr:BCAH187_A2861 UvrD/Rep helicase family protein gene gene1347 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1311 Amir_1312 Amir_1312 Amir_1312 1449434 1450459 + 2-hydroxy-3-oxopropionate reductase PFAM: 6-phosphogluconate dehydrogenase NAD-binding~KEGG: dvm:DvMF_2927 2-hydroxy-3-oxopropionate reductase gene gene1348 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1312 Amir_1313 Amir_1313 Amir_1313 1450591 1451400 + hypothetical protein KEGG: hypothetical protein gene gene1349 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1313 Amir_1314 Amir_1314 Amir_1314 1451556 1452161 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: mlo:mll3939 TetR family transcriptional regulator gene gene1350 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1314 Amir_1315 Amir_1315 Amir_1315 1452198 1453577 + pyridine nucleotide-disulphide oxidoreductase dimerization region PFAM: pyridine nucleotide-disulphide oxidoreductase dimerization region%3B FAD-dependent pyridine nucleotide- disulphide oxidoreductase%3B glucose-inhibited division protein A%3B FAD dependent oxidoreductase~KEGG: mxa:MXAN_0278 mercuric reductase%2C truncated gene gene1351 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1315 Amir_1316 Amir_1316 Amir_1316 1453946 1454317 + hypothetical protein gene gene1352 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1316 Amir_1317 Amir_1317 Amir_1317 1454359 1455615 - hypothetical protein KEGG: hypothetical protein gene gene1353 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1317 Amir_1318 Amir_1318 Amir_1318 1455998 1456501 + hypothetical protein gene gene1354 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1318 Amir_1319 Amir_1319 Amir_1319 1456796 1458490 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: pzu:PHZ_c3203 ABC transporter%2C HlyB/MsbA family gene gene1355 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1319 Amir_1320 Amir_1320 Amir_1320 1458690 1460552 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: pzu:PHZ_c3203 ABC transporter%2C HlyB/MsbA family gene gene1356 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1320 Amir_1321 Amir_1321 Amir_1321 1460697 1460852 - hypothetical protein gene gene1357 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1321 Amir_1322 Amir_1322 Amir_1322 1460863 1463427 - serine/threonine protein kinase PFAM: Lanthionine synthetase C family protein~SMART: serine/threonine protein kinase~KEGG: smt:Smal_2130 serine/threonine protein kinase gene gene1358 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1322 Amir_1323 Amir_1323 Amir_1323 1463858 1464514 + hypothetical protein gene gene1359 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1323 Amir_1324 Amir_1324 Amir_1324 1464834 1466069 - Beta-ketoacyl synthase PFAM: Beta-ketoacyl synthase~KEGG: ade:Adeh_2746 3-oxoacyl-[acyl-carrier- protein] synthase II gene gene1360 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1324 Amir_1325 Amir_1325 Amir_1325 1466066 1466305 - acyl carrier protein TIGRFAM: acyl carrier protein~PFAM: phosphopantetheine-binding~KEGG: ppd:Ppro_1745 acyl carrier protein gene gene1361 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1325 Amir_1326 Amir_1326 Amir_1326 1466460 1467437 - 3-oxoacyl-(acyl-carrier-protein) synthase III KEGG: bha:BH2883 3-oxoacyl-(acyl carrier protein) synthase III~TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III~PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein%3B 3-Oxoacyl-[acyl-carrier- protein (ACP)] synthase III gene gene1362 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1326 Amir_1327 Amir_1327 Amir_1327 1467434 1468369 - Acyl transferase PFAM: Acyl transferase~KEGG: bvi:Bcep1808_1041 [acyl-carrier-protein] S- malonyltransferase gene gene1363 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1327 Amir_1328 Amir_1328 Amir_1328 1468569 1469750 - putative transcriptional regulator%2C PucR family KEGG: reu:Reut_B5661 CdaR family transcriptional regulator gene gene1364 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1328 Amir_1329 Amir_1329 Amir_1329 1470123 1471016 + Conserved TM helix repeat-containing protein PFAM: Conserved TM helix repeat-containing protein~KEGG: pfo:Pfl01_1775 TM helix protein gene gene1365 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1329 Amir_1330 Amir_1330 Amir_1330 1471751 1472449 + nicotinamide mononucleotide transporter PnuC TIGRFAM: nicotinamide mononucleotide transporter PnuC~PFAM: Nicotinamide mononucleotide transporter PnuC~KEGG: mpt:Mpe_A2849 putative transporter gene gene1366 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1330 Amir_1331 Amir_1331 Amir_1331 1472436 1473782 - extracellular solute-binding protein family 1 PFAM: extracellular solute-binding protein family 1~KEGG: mxa:MXAN_7295 putative sugar ABC transporter%2C periplasmic sugar-binding protein gene gene1367 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1331 Amir_1332 Amir_1332 Amir_1332 1473772 1476027 - hypothetical protein KEGG: hypothetical protein gene gene1368 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1332 Amir_1333 Amir_1333 Amir_1333 1476231 1478990 - 2-oxo-acid dehydrogenase E1 subunit%2C homodimeric type TIGRFAM: 2-oxo-acid dehydrogenase E1 subunit%2C homodimeric type~KEGG: tgr:Tgr7_2456 pyruvate dehydrogenase (acetyl- transferring) gene gene1369 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1333 Amir_1334 Amir_1334 Amir_1334 1479123 1479224 + hypothetical protein gene gene1370 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1334 Amir_1335 Amir_1335 Amir_1335 1479301 1479735 + conserved hypothetical protein KEGG: ccs:CCNA_02657 hypothetical protein gene gene1371 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1335 Amir_1336 Amir_1336 Amir_1336 1479850 1480308 + alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen%3B Redoxin domain protein~KEGG: pzu:PHZ_p0072 peroxiredoxin gene gene1372 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1336 Amir_1337 Amir_1337 Amir_1337 1480601 1480843 - hypothetical protein gene gene1374 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1337 Amir_1338 Amir_1338 Amir_1338 1481435 1481719 + hypothetical protein gene gene1375 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1338 Amir_1339 Amir_1339 Amir_1339 1481994 1483025 + Saccharopine dehydrogenase PFAM: Saccharopine dehydrogenase~KEGG: pfl:PFL_3454 hypothetical protein gene gene1376 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1339 Amir_1340 Amir_1340 Amir_1340 1483000 1484004 - lipoic acid synthetase KEGG: sus:Acid_4705 lipoyl synthase~TIGRFAM: lipoic acid synthetase~PFAM: Radical SAM domain protein~SMART: Elongator protein 3/MiaB/NifB gene gene1377 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1340 Amir_1341 Amir_1341 Amir_1341 1484020 1484943 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B KR domain protein~KEGG: bid:Bind_0032 short-chain dehydrogenase/reductase SDR gene gene1378 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1341 Amir_1342 Amir_1342 Amir_1342 1485131 1486066 + Luciferase-like monooxygenase PFAM: Luciferase-like monooxygenase~KEGG: rpi:Rpic_0157 luciferase-like monooxygenase gene gene1379 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1342 Amir_1343 Amir_1343 Amir_1343 1486216 1487214 - hypothetical protein KEGG: afw:Anae109_3917 TPR repeat-containing protein gene gene1380 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1343 Amir_1344 Amir_1344 Amir_1344 1487308 1488051 - lipoate-protein ligase B TIGRFAM: lipoate-protein ligase B~PFAM: biotin/lipoate A/B protein ligase~KEGG: aba:Acid345_4305 lipoate-protein ligase B gene gene1381 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1344 Amir_1345 Amir_1345 Amir_1345 1488048 1488896 - helix-turn-helix domain protein SMART: helix-turn-helix domain protein~KEGG: bxe:Bxe_B0902 XRE family transcriptional regulator gene gene1382 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1345 Amir_1346 Amir_1346 Amir_1346 1488999 1489442 + conserved hypothetical protein KEGG: bsu:BSU06870 hypothetical protein gene gene1383 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1346 Amir_1347 Amir_1347 Amir_1347 1489439 1490266 + NmrA family protein PFAM: NmrA family protein~KEGG: scl:sce0707 hypothetical protein gene gene1384 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1347 Amir_1348 Amir_1348 Amir_1348 1490263 1490886 - phosphoesterase PA-phosphatase related PFAM: phosphoesterase PA-phosphatase related~KEGG: ade:Adeh_2905 phosphoesterase%2C PA-phosphatase related gene gene1385 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1348 Amir_1349 Amir_1349 Amir_1349 1490886 1491779 - domain of unknown function DUF1731 PFAM: domain of unknown function DUF1731%3B NAD- dependent epimerase/dehydratase~KEGG: dal:Dalk_2335 domain of unknown function DUF1731 gene gene1386 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1349 Amir_1350 Amir_1350 Amir_1350 1491949 1493670 - 2-oxoglutarate dehydrogenase%2C E2 component%2C dihydrolipoamide succinyltransferase KEGG: aba:Acid345_4350 2-oxoglutarate dehydrogenase E2 component~TIGRFAM: 2-oxoglutarate dehydrogenase%2C E2 component%2C dihydrolipoamide succinyltransferase~PFAM: catalytic domain of components of various dehydrogenase complexes%3B biotin/lipoyl attachment domain- containing protein%3B E3 binding domain protein gene gene1387 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1350 Amir_1351 Amir_1351 Amir_1351 1493723 1495093 - dihydrolipoamide dehydrogenase TIGRFAM: dihydrolipoamide dehydrogenase~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase%3B pyridine nucleotide-disulphide oxidoreductase dimerization region%3B glucose-inhibited division protein A%3B FAD dependent oxidoreductase~KEGG: bcy:Bcer98_2857 dihydrolipoamide dehydrogenase gene gene1388 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1351 Amir_1352 Amir_1352 Amir_1352 1495271 1495594 + hypothetical protein gene gene1389 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1352 Amir_1353 Amir_1353 Amir_1353 1495756 1496364 + putative secreted protein KEGG: scl:sce9254 putative secreted protein gene gene1390 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1353 Amir_1354 Amir_1354 Amir_1354 1496488 1497987 - Leucyl aminopeptidase PFAM: peptidase M17 leucyl aminopeptidase domain protein~KEGG: pst:PSPTO_1271 leucyl aminopeptidase gene gene1391 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1354 Amir_1355 Amir_1355 Amir_1355 1498190 1499425 + hypothetical protein KEGG: bph:Bphy_0096 amino acid permease-associated region gene gene1392 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1355 Amir_1356 Amir_1356 Amir_1356 1499443 1500546 + branched-chain amino acid aminotransferase KEGG: swi:Swit_0778 branched-chain amino acid aminotransferase~TIGRFAM: branched-chain amino acid aminotransferase~PFAM: aminotransferase class IV gene gene1393 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1356 Amir_1357 Amir_1357 Amir_1357 1500607 1501320 - cobalamin 5'-phosphate synthase TIGRFAM: cobalamin 5'-phosphate synthase~PFAM: cobalamin-5-phosphate synthase CobS~KEGG: pde:Pden_1566 cobalamin 5'-phosphate synthase gene gene1394 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1357 Amir_1358 Amir_1358 Amir_1358 1501352 1502389 - nicotinate-nucleotide/dimethylbenzimidazolephosp horibosyltransferase KEGG: cvi:CV_0493 nicotinate-nucleotide- dimethylbenzimidazole phosphoribosyltransferase~TIGRFAM:nicotinate-nucleotide/dimethylbenzimidazolep hosphoribosyltransferase~PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase gene gene1395 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1358 Amir_1359 Amir_1359 Amir_1359 1502386 1502928 - cobalbumin biosynthesis protein PFAM: cobalbumin biosynthesis protein~KEGG: bbt:BBta_3140 adenosylcobinamide kinase gene gene1396 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1359 Amir_1360 Amir_1360 Amir_1360 1503061 1504047 - aldo/keto reductase PFAM: aldo/keto reductase~KEGG: mxa:MXAN_6482 oxidoreductase%2C aldo/keto reductase family gene gene1397 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1360 Amir_1361 Amir_1361 Amir_1361 1504077 1504490 - hypothetical protein gene gene1398 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1361 Amir_1362 Amir_1362 Amir_1362 1504478 1505191 - hypothetical protein gene gene1399 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1362 Amir_1363 Amir_1363 Amir_1363 1505333 1505971 - hypothetical protein gene gene1400 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1363 Amir_1364 Amir_1364 Amir_1364 1506376 1506750 + iron-sulfur cluster assembly accessory protein TIGRFAM: iron-sulfur cluster assembly accessory protein~PFAM: HesB/YadR/YfhF-family protein~KEGG: bvi:Bcep1808_0647 iron-sulfur cluster insertion protein ErpA gene gene1401 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1364 Amir_1365 Amir_1365 Amir_1365 1506885 1507109 - hypothetical protein gene gene1402 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1365 Amir_1366 Amir_1366 Amir_1366 1507373 1509301 - asparagine synthase (glutamine-hydrolyzing) KEGG: bsu:BSU30540 asparagine synthetase~TIGRFAM: asparagine synthase (glutamine- hydrolyzing)~PFAM: asparagine synthase%3B glutamine amidotransferase class-II gene gene1403 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1366 Amir_1367 Amir_1367 Amir_1367 1509507 1510442 + cytochrome c oxidase%2C subunit II TIGRFAM: cytochrome c oxidase%2C subunit II~PFAM: cytochrome c oxidase subunit II~KEGG: aeh:Mlg_0293 cytochrome c oxidase%2C subunit II gene gene1404 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1367 Amir_1368 Amir_1368 Amir_1368 1510453 1510869 + Cytochrome-c oxidase gene gene1405 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1368 Amir_1369 Amir_1369 Amir_1369 1511336 1512055 - phospholipid/glycerol acyltransferase PFAM: phospholipid/glycerol acyltransferase~SMART: phospholipid/glycerol acyltransferase~KEGG: gsu:GSU3116 1-acyl-sn-glycerol-3-phosphate acyltransferase%2C putative gene gene1406 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1369 Amir_1370 Amir_1370 Amir_1370 1512542 1513591 - anthranilate phosphoribosyltransferase KEGG: mno:Mnod_5575 anthranilate phosphoribosyltransferase~TIGRFAM: anthranilate phosphoribosyltransferase~PFAM: glycosyl transferase family 3%3B Glycosyl transferase%2C family 3-like gene gene1407 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1370 Amir_1371 Amir_1371 Amir_1371 1513597 1514007 - response regulator receiver protein KEGG: rpc:RPC_3025 two component transcriptional regulator gene gene1408 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1371 Amir_1372 Amir_1372 Amir_1372 1514050 1514460 - hypothetical protein gene gene1409 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1372 Amir_1373 Amir_1373 Amir_1373 1514534 1515148 + cytochrome c oxidase subunit III PFAM: cytochrome c oxidase subunit III~KEGG: nar:Saro_0918 cytochrome c oxidase%2C subunit III gene gene1410 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1373 Amir_1374 Amir_1374 Amir_1374 1515190 1516002 + cytochrome c class I PFAM: cytochrome c class I~KEGG: pne:Pnec_1360 cytochrome c oxidase%2C cbb3- type%2C subunit III gene gene1411 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1374 Amir_1375 Amir_1375 Amir_1375 1515999 1517123 + Rieske (2Fe-2S) domain protein PFAM: Rieske [2Fe-2S] domain protein~KEGG: mpt:Mpe_A0364 Rieske iron-sulfur protein gene gene1412 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1375 Amir_1376 Amir_1376 Amir_1376 1517120 1518814 + cytochrome b/b6 domain protein PFAM: Cytochrome b/b6 domain~KEGG: hha:Hhal_2108 cytochrome b/b6%2C N-terminal domain gene gene1413 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1376 Amir_1377 Amir_1377 Amir_1377 1518884 1519165 - transcriptional regulator%2C AsnC family PFAM: regulatory protein AsnC/Lrp family~KEGG: dps:DP0751 transcription regulator gene gene1414 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1377 Amir_1378 Amir_1378 Amir_1378 1519203 1520939 - DNA polymerase III%2C epsilon subunit KEGG: tbd:Tbd_0827 DNA polymerase III%2C epsilon subunit~TIGRFAM: DNA polymerase III%2C epsilon subunit~PFAM: Exonuclease RNase T and DNA polymerase III%3B Excinuclease ABC C subunit domain protein~SMART: Exonuclease%3B Excinuclease ABC C subunit domain protein gene gene1415 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1378 Amir_1379 Amir_1379 Amir_1379 1520999 1522552 + protein of unknown function DUF901 PFAM: protein of unknown function DUF901~KEGG: ank:AnaeK_0136 methyltransferase type 11 gene gene1416 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1379 Amir_1380 Amir_1380 Amir_1380 1522952 1523983 + NLP/P60 protein PFAM: NLP/P60 protein~KEGG: dvu:DVU1392 NLP/P60 family protein gene gene1417 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1380 Amir_1381 Amir_1381 Amir_1381 1524106 1525338 + hypothetical protein KEGG: ppd:Ppro_1566 TPR repeat-containing protein gene gene1418 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1381 Amir_1382 Amir_1382 Amir_1382 1525550 1526680 + glycosyl transferase group 1 PFAM: glycosyl transferase group 1~KEGG: acr:Acry_1803 glycosyl transferase%2C group 1 gene gene1419 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1382 Amir_1383 Amir_1383 Amir_1383 1526877 1528685 - AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: acp:A2cp1_1619 AMP-dependent synthetase and ligase gene gene1420 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1383 Amir_1384 Amir_1384 Amir_1384 1528815 1529195 + hypothetical protein gene gene1421 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1384 Amir_1385 Amir_1385 Amir_1385 1529207 1529995 + metallophosphoesterase PFAM: metallophosphoesterase~KEGG: sit:TM1040_3062 metallophosphoesterase gene gene1422 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1385 Amir_1386 Amir_1386 Amir_1386 1530023 1530457 + cyclase/dehydrase PFAM: cyclase/dehydrase~KEGG: acp:A2cp1_2307 cyclase/dehydrase gene gene1423 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1386 Amir_1387 Amir_1387 Amir_1387 1530454 1531674 + Arsenite-transporting ATPase PFAM: Anion-transporting ATPase~KEGG: bcz:BCZK0288 arsenite-transporting ATPase gene gene1424 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1387 Amir_1388 Amir_1388 Amir_1388 1531671 1532081 + hypothetical protein KEGG: scl:sce1096 cell wall surface anchor family protein gene gene1425 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1388 Amir_1389 Amir_1389 Amir_1389 1532075 1533052 + ROK family protein PFAM: ROK family protein~KEGG: mlo:mlr7234 glucose kinase gene gene1426 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1389 Amir_1390 Amir_1390 Amir_1390 1533348 1534754 + putative anti-sigma regulatory factor%2C serine/threonine protein kinase PFAM: ATP-binding region ATPase domain protein~KEGG: predicted gene%2C 100042292 gene gene1427 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1390 Amir_1391 Amir_1391 Amir_1391 1534787 1535266 - hypothetical protein KEGG: EP2 procyclin gene gene1428 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1391 Amir_1392 Amir_1392 Amir_1392 1535477 1536214 + phospholipid/glycerol acyltransferase PFAM: phospholipid/glycerol acyltransferase~SMART: phospholipid/glycerol acyltransferase~KEGG: phospholipid/glycerol acyltransferase gene gene1429 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1392 Amir_1393 Amir_1393 Amir_1393 1536429 1536941 + hypothetical protein KEGG: reu:Reut_C6145 hypothetical protein gene gene1430 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1393 Amir_1394 Amir_1394 Amir_1394 1537014 1538054 + phosphofructokinase KEGG: mxa:MXAN_6373 6-phosphofructokinase I~TIGRFAM: phosphofructokinase~PFAM: phosphofructokinase gene gene1431 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1394 Amir_1395 Amir_1395 Amir_1395 1538323 1539711 + phospho-2-dehydro-3-deoxyheptonate aldolase KEGG: rce:RC1_0952 3-deoxy-7-phosphoheptulonate synthase~TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase~PFAM: DAHP synthetase class II gene gene1432 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1395 Amir_1396 Amir_1396 Amir_1396 1539870 1542401 - serine/threonine protein kinase with PASTA sensor(s) PFAM: Serine/threonine protein kinase-related%3B tyrosine protein kinase%3B protein of unknown function RIO1%3B PASTA domain containing protein~SMART: serine/threonine protein kinase%3B tyrosine protein kinase%3B PASTA domain containing protein~KEGG: bha:BH2504 serine/threonine protein kinase gene gene1433 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1396 Amir_1397 Amir_1397 Amir_1397 1542650 1542988 + hypothetical protein gene gene1434 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1397 Amir_1398 Amir_1398 Amir_1398 1543167 1544627 - hypothetical protein KEGG: met:M446_4899 hypothetical protein gene gene1435 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1398 Amir_1399 Amir_1399 Amir_1399 1545067 1546575 - phytoene desaturase TIGRFAM: phytoene desaturase~PFAM: amine oxidase%3B FAD dependent oxidoreductase~KEGG: mxa:MXAN_0895 phytoene desaturase gene gene1436 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1399 Amir_1400 Amir_1400 Amir_1400 1546577 1547647 - Polyprenyl synthetase PFAM: Polyprenyl synthetase~KEGG: scl:sce4204 geranyltranstransferase gene gene1437 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1400 Amir_1401 Amir_1401 Amir_1401 1547753 1548643 + 5%2C10-methylenetetrahydrofolate reductase KEGG: acr:Acry_0219 5%2C10-methylenetetrahydrofolate reductase~TIGRFAM: 5%2C10-methylenetetrahydrofolate reductase~PFAM: methylenetetrahydrofolate reductase gene gene1438 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1401 Amir_1402 Amir_1402 Amir_1402 1548687 1549127 - alkylhydroperoxidase like protein%2C AhpD family TIGRFAM: alkylhydroperoxidase like protein%2C AhpD family~PFAM: Carboxymuconolactone decarboxylase~KEGG: ade:Adeh_3128 alkylhydroperoxidase AhpD core gene gene1439 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1402 Amir_1403 Amir_1403 Amir_1403 1549188 1549841 - hypothetical protein gene gene1440 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1403 Amir_1404 Amir_1404 Amir_1404 1550030 1551709 + protein of unknown function DUF885 PFAM: protein of unknown function DUF885~KEGG: scl:sce1630 hypothetical protein gene gene1441 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1404 Amir_1405 Amir_1405 Amir_1405 1551911 1552534 + hypothetical protein gene gene1442 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1405 Amir_1406 Amir_1406 Amir_1406 1552583 1553146 - GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: bce:BC2347 acetyltransferase gene gene1443 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1406 Amir_1407 Amir_1407 Amir_1407 1553143 1553646 - YbaK/prolyl-tRNA synthetase associated region PFAM: YbaK/prolyl-tRNA synthetase associated region~KEGG: bur:Bcep18194_A6310 YbaK/prolyl-tRNA synthetase like protein gene gene1444 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1407 Amir_1408 Amir_1408 Amir_1408 1553938 1554774 + protein of unknown function DUF1503 PFAM: protein of unknown function DUF1503 gene gene1445 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1408 Amir_1409 Amir_1409 Amir_1409 1554930 1556525 - hypothetical protein KEGG: vsp:VS_1778 hypothetical protein gene gene1446 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1409 Amir_1410 Amir_1410 Amir_1410 1556601 1557017 + hypothetical protein KEGG: rle:RL3033 hypothetical protein gene gene1447 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1410 Amir_1411 Amir_1411 Amir_1411 1557326 1557964 + transcriptional regulator%2C GntR family PFAM: regulatory protein GntR HTH%3B GntR domain protein~SMART: regulatory protein GntR HTH~KEGG: gme:Gmet_0062 GntR family transcriptional regulator gene gene1448 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1411 Amir_1412 Amir_1412 Amir_1412 1557966 1558961 + 1-aminocyclopropane-1-carboxylate deaminase KEGG: bmn:BMA10247_A1385 1-aminocyclopropane-1- carboxylate deaminase~TIGRFAM: 1-aminocyclopropane-1-carboxylate deaminase~PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit gene gene1449 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1412 Amir_1413 Amir_1413 Amir_1413 1559384 1564204 - DEAD/H associated domain protein PFAM: DEAD/H associated domain protein%3B DEAD/DEAH box helicase domain protein%3B helicase domain protein~SMART: DEAD-like helicase%3B helicase domain protein%3B AAA ATPase~KEGG: scl:sce3970 putative ATP-dependent helicase gene gene1450 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1413 Amir_1414 Amir_1414 Amir_1414 1564201 1564338 - hypothetical protein gene gene1451 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1414 Amir_1415 Amir_1415 Amir_1415 1564506 1566479 + Heat shock protein 70 PFAM: Heat shock protein 70~KEGG: hha:Hhal_0145 heat shock protein 70 gene gene1452 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1415 Amir_1416 Amir_1416 Amir_1416 1566531 1567739 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: bca:BCE_1913 major facilitator superfamily protein gene gene1453 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1416 Amir_1417 Amir_1417 Amir_1417 1567764 1567910 - hypothetical protein gene gene1454 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1417 Amir_1418 Amir_1418 Amir_1418 1568054 1568248 + hypothetical protein gene gene1455 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1418 Amir_1419 Amir_1419 Amir_1419 1568424 1569467 + recA protein KEGG: bha:BH2383 recombinase A~TIGRFAM: recA protein~PFAM: RecA domain protein~SMART: AAA ATPase gene gene1456 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1419 Amir_1420 Amir_1420 Amir_1420 1569572 1570075 + regulatory protein RecX PFAM: regulatory protein RecX~KEGG: scl:sce0207 hypothetical protein gene gene1457 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1420 Amir_1421 Amir_1421 Amir_1421 1570515 1571207 - conserved hypothetical protein KEGG: bsu:BSU25740 hypothetical protein gene gene1458 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1421 Amir_1422 Amir_1422 Amir_1422 1571513 1572151 - 2-dehydro-3-deoxyphosphogluconate aldolase/4- hydroxy-2-oxoglutarate aldolase KEGG: sil:SPO3031 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase~TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase~PFAM: KDPG and KHG aldolase gene gene1459 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1422 Amir_1423 Amir_1423 Amir_1423 1572148 1574019 - 6-phosphogluconate dehydratase KEGG: pap:PSPA7_1934 phosphogluconate dehydratase~TIGRFAM: 6-phosphogluconate dehydratase~PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase gene gene1460 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1423 Amir_1424 Amir_1424 Amir_1424 1574245 1574538 + hypothetical protein gene gene1461 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1424 Amir_1425 Amir_1425 Amir_1425 1575022 1575783 + putative integral membrane protein KEGG: aba:Acid345_1383 putative integral membrane protein gene gene1462 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1425 Amir_1426 Amir_1426 Amir_1426 1575828 1577699 + Succinate dehydrogenase PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein%3B FAD dependent oxidoreductase~KEGG: aba:Acid345_1384 succinate dehydrogenase flavoprotein subunit gene gene1463 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1426 Amir_1427 Amir_1427 Amir_1427 1577701 1578450 + succinate dehydrogenase and fumarate reductase iron-sulfur protein TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein~PFAM: ferredoxin~KEGG: aba:Acid345_1385 fumarate reductase iron- sulfur subunit gene gene1464 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1427 Amir_1428 Amir_1428 Amir_1428 1578402 1579256 - ADP-ribosylation/Crystallin J1 PFAM: ADP-ribosylation/Crystallin J1~KEGG: predicted protein%3B K05521 ADP- ribosylglycohydrolase gene gene1465 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1428 Amir_1429 Amir_1429 Amir_1429 1579290 1579418 - hypothetical protein gene gene1466 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1429 Amir_1430 Amir_1430 Amir_1430 1579612 1580081 + pseudogene gene1467 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1430 Amir_1431 Amir_1431 Amir_1431 1580183 1583029 - ribonucleoside-diphosphate reductase%2C adenosylcobalamin-dependent KEGG: mxa:MXAN_2925 vitamin B12-dependent ribonucleotide reductase~TIGRFAM: ribonucleoside-diphosphate reductase%2C adenosylcobalamin-dependent~PFAM: Ribonucleotide reductase class II vitamin B12- dependent%3B ribonucleotide reductase large subunit gene gene1468 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1431 Amir_1432 Amir_1432 Amir_1432 1583151 1583606 - ATP-cone domain protein PFAM: ATP-cone domain protein~KEGG: mxa:MXAN_4765 hypothetical protein gene gene1469 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1432 Amir_1433 Amir_1433 Amir_1433 1584009 1584506 - Peptidoglycan-binding LysM PFAM: Peptidoglycan-binding LysM~KEGG: bpa:BPP0017 hypothetical protein gene gene1470 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1433 Amir_1434 Amir_1434 Amir_1434 1584725 1585432 + SOS-response transcriptional repressor%2C LexA KEGG: bha:BH2356 LexA repressor~TIGRFAM: LexA repressor~PFAM: LexA DNA-binding domain protein%3B peptidase S24 and S26 domain protein gene gene1471 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1434 Amir_1435 Amir_1435 Amir_1435 1585456 1586544 - hypothetical protein KEGG: scl:sce0154 hypothetical protein gene gene1472 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1435 Amir_1436 Amir_1436 Amir_1436 1586571 1588013 - GTP-binding proten HflX TIGRFAM: GTP-binding proten HflX~PFAM: GTP-binding protein HSR1-related~KEGG: GTP-binding family protein%3B K03665 GTP- binding protein HflX gene gene1473 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1436 Amir_1437 Amir_1437 Amir_1437 1588056 1588544 - transcriptional regulator%2C ArsR family PFAM: regulatory protein ArsR gene gene1474 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1437 Amir_1438 Amir_1438 Amir_1438 1588653 1589903 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: sus:Acid_2815 major facilitator transporter gene gene1475 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1438 Amir_1439 Amir_1439 Amir_1439 1589935 1590753 - diaminopimelate epimerase KEGG: ade:Adeh_0570 diaminopimelate epimerase~TIGRFAM: diaminopimelate epimerase~PFAM: diaminopimelate epimerase gene gene1476 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1439 Amir_1440 Amir_1440 Amir_1440 1590764 1591666 - tRNA delta(2)-isopentenylpyrophosphate transferase KEGG: bha:BH2366 tRNA delta(2)- isopentenylpyrophosphate transferase~TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase~PFAM: tRNA isopentenyltransferase gene gene1477 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1440 Amir_1441 Amir_1441 Amir_1441 1591663 1592394 - hypothetical protein KEGG: ade:Adeh_1392 flagellar biosynthesis/type III secretory pathway protein-like gene gene1478 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1441 Amir_1442 Amir_1442 Amir_1442 1592558 1593904 + protein of unknown function DUF349 PFAM: protein of unknown function DUF349~KEGG: pha:PSHAa1895 hypothetical protein gene gene1479 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1442 Amir_1443 Amir_1443 Amir_1443 1593983 1594534 - hypothetical protein KEGG: hypothetical protein gene gene1480 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1443 Amir_1444 Amir_1444 Amir_1444 1594531 1596006 - RNA modification enzyme%2C MiaB family KEGG: bsu:BSU17010 hypothetical protein~TIGRFAM: RNA modification enzyme%2C MiaB family%3B tRNA- i(6)A37 thiotransferase enzyme MiaB~PFAM: Protein of unknown function UPF0004%3B Radical SAM domain protein~SMART: Elongator protein 3/MiaB/NifB gene gene1481 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1444 Amir_1445 Amir_1445 Amir_1445 1596358 1597281 + TRAP transporter solute receptor%2C TAXI family TIGRFAM: TRAP transporter solute receptor%2C TAXI family~KEGG: tmz:Tmz1t_0431 TRAP transporter solute receptor%2C TAXI family gene gene1482 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1445 Amir_1446 Amir_1446 Amir_1446 1597325 1598710 - histidine kinase PFAM: ATP-binding region ATPase domain protein%3B histidine kinase HAMP region domain protein%3B histidine kinase A domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein~KEGG: pfl:PFL_3853 sensor histidine kinase gene gene1483 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1446 Amir_1447 Amir_1447 Amir_1447 1598711 1599379 - two component transcriptional regulator%2C winged helix family PFAM: response regulator receiver%3B transcriptional regulator domain protein~SMART: response regulator receiver~KEGG: tbd:Tbd_2791 two component transcriptional regulator gene gene1484 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1447 Amir_1448 Amir_1448 Amir_1448 1599516 1600271 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: pde:Pden_5082 ABC transporter related gene gene1485 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1448 Amir_1449 Amir_1449 Amir_1449 1600339 1601226 + extracellular solute-binding protein family 3 PFAM: extracellular solute-binding protein family 3~SMART: extracellular solute-binding protein family 3~KEGG: bce:BC0640 glutamine-binding protein gene gene1486 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1449 Amir_1450 Amir_1450 Amir_1450 1601309 1601956 + polar amino acid ABC transporter%2C inner membrane subunit TIGRFAM: polar amino acid ABC transporter%2C inner membrane subunit~PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: bca:BCE_0709 amino acid ABC transporter%2C permease protein gene gene1487 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1450 Amir_1451 Amir_1451 Amir_1451 1601953 1602825 + polar amino acid ABC transporter%2C inner membrane subunit TIGRFAM: polar amino acid ABC transporter%2C inner membrane subunit~PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: aav:Aave_3754 polar amino acid ABC transporter%2C inner membrane subunit gene gene1488 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1451 Amir_1452 Amir_1452 Amir_1452 1602925 1603734 + hypothetical protein KEGG: psb:Psyr_0113 hypothetical protein gene gene1489 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1452 Amir_1453 Amir_1453 Amir_1453 1603952 1604146 + hypothetical protein gene gene1490 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1453 Amir_1454 Amir_1454 Amir_1454 1604497 1605021 - protein of unknown function DUF1470 PFAM: protein of unknown function DUF1470~KEGG: xau:Xaut_0954 hypothetical protein gene gene1491 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1454 Amir_1455 Amir_1455 Amir_1455 1605108 1605767 + conserved hypothetical protein KEGG: pde:Pden_0168 hypothetical protein gene gene1492 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1455 Amir_1456 Amir_1456 Amir_1456 1605798 1606733 + conserved hypothetical protein KEGG: sus:Acid_4767 hypothetical protein gene gene1493 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1456 Amir_1457 Amir_1457 Amir_1457 1606759 1607457 + Deoxyribonuclease V PFAM: Endonuclease V~KEGG: sde:Sde_3689 endonuclease V gene gene1494 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1457 Amir_1458 Amir_1458 Amir_1458 1607462 1608694 - glycoside hydrolase family 4 PFAM: glycoside hydrolase family 4%3B NAD-dependent glycerol-3-phosphate dehydrogenase domain protein~KEGG: sus:Acid_1925 glycoside hydrolase family protein gene gene1495 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1458 Amir_1459 Amir_1459 Amir_1459 1608714 1609712 - adenosine deaminase KEGG: aba:Acid345_0045 adenosine deaminase~TIGRFAM: adenosine deaminase~PFAM: adenosine/AMP deaminase gene gene1496 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1459 Amir_1460 Amir_1460 Amir_1460 1609839 1611662 + Xaa-Pro dipeptidyl-peptidase PFAM: peptidase S15%3B X-Pro dipeptidyl-peptidase domain protein~KEGG: bca:BCE_2891 x-prolyl-dipeptidyl aminopeptidase gene gene1497 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1460 Amir_1461 Amir_1461 Amir_1461 1611816 1612826 + hypothetical protein KEGG: afw:Anae109_2566 H+transporting two-sector ATPase C (AC39) subunit gene gene1498 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1461 Amir_1462 Amir_1462 Amir_1462 1613008 1615050 - peptidase S9 prolyl oligopeptidase active site domain protein PFAM: peptidase S9 prolyl oligopeptidase active site domain protein~KEGG: ade:Adeh_0114 peptidase S9%2C prolyl oligopeptidase gene gene1499 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1462 Amir_1463 Amir_1463 Amir_1463 1615056 1616018 - UDP-glucose 4-epimerase TIGRFAM: UDP-glucose 4-epimerase~PFAM: NAD-dependent epimerase/dehydratase%3B dTDP-4- dehydrorhamnose reductase%3B Male sterility domain%3B 3-beta hydroxysteroid dehydrogenase/isomerase%3B polysaccharide biosynthesis protein CapD%3B short-chain dehydrogenase/reductase SDR~KEGG: bha:BH1108 UDP-glucose 4-epimerase gene gene1500 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1463 Amir_1464 Amir_1464 Amir_1464 1617156 1618340 - galactokinase TIGRFAM: galactokinase~PFAM: GHMP kinase domain protein%3B GHMP kinase~KEGG: scl:sce2225 hypothetical protein gene gene1501 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1464 Amir_1465 Amir_1465 Amir_1465 1618346 1619038 - iron (metal) dependent repressor%2C DtxR family PFAM: iron dependent repressor%3B FeoA family protein~SMART: iron dependent repressor~KEGG: sus:Acid_2178 DtxR family iron dependent repressor gene gene1502 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1465 Amir_1466 Amir_1466 Amir_1466 1619136 1619984 + Rhodanese domain protein PFAM: Rhodanese domain protein~SMART: Rhodanese domain protein~KEGG: tbd:Tbd_2489 3-mercaptopyruvate sulfurtransferase gene gene1503 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1466 Amir_1467 Amir_1467 Amir_1467 1620356 1620988 - hypothetical protein KEGG: scl:sce4324 hypothetical protein gene gene1504 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1467 Amir_1468 Amir_1468 Amir_1468 1621190 1622383 + histone deacetylase superfamily PFAM: histone deacetylase superfamily~KEGG: bha:BH3237 acetoin dehydrogenase gene gene1505 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1468 Amir_1469 Amir_1469 Amir_1469 1622383 1625091 + CoA-binding domain protein PFAM: CoA-binding domain protein%3B GCN5-related N- acetyltransferase~KEGG: mgm:Mmc1_1098 CoA-binding domain protein gene gene1506 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1469 Amir_1470 Amir_1470 Amir_1470 1625368 1626192 + extracellular solute-binding protein family 3 PFAM: extracellular solute-binding protein family 3~SMART: extracellular solute-binding protein family 3%3B ionotropic glutamate receptor~KEGG: bsu:BSU27440 glutamine ABC transporter (glutamine-binding protein) gene gene1507 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1470 Amir_1471 Amir_1471 Amir_1471 1626252 1627025 + transcriptional regulator%2C GntR family PFAM: UbiC transcription regulator-associated domain protein%3B regulatory protein GntR HTH~SMART: regulatory protein GntR HTH~KEGG: bha:BH3323 GntR family transcriptional regulator gene gene1508 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1471 Amir_1472 Amir_1472 Amir_1472 1627273 1627623 + hypothetical protein gene gene1509 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1472 Amir_1473 Amir_1473 Amir_1473 1627903 1628613 - hypothetical protein KEGG: aba:Acid345_3970 hypothetical protein gene gene1510 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1473 Amir_1474 Amir_1474 Amir_1474 1628610 1629170 - putative secreted protein KEGG: gbm:Gbem_2014 putative secreted protein gene gene1511 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1474 Amir_1475 Amir_1475 Amir_1475 1629277 1630431 - protein of unknown function UPF0027 PFAM: protein of unknown function UPF0027~KEGG: scl:sce1307 hypothetical protein gene gene1512 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1475 Amir_1476 Amir_1476 Amir_1476 1630517 1631320 - ABC-2 type transporter PFAM: ABC-2 type transporter~KEGG: aeh:Mlg_2716 ABC-2 type transporter gene gene1513 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1476 Amir_1477 Amir_1477 Amir_1477 1631317 1632282 - daunorubicin resistance ABC transporter ATPase subunit KEGG: aeh:Mlg_2715 daunorubicin resistance ABC transporter ATPase subunit~TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit~PFAM: ABC transporter related~SMART: AAA ATPase gene gene1514 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1477 Amir_1478 Amir_1478 Amir_1478 1632374 1632802 + GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: smt:Smal_2582 GCN5-related N- acetyltransferase gene gene1515 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1478 Amir_1479 Amir_1479 Amir_1479 1632947 1633801 + hypothetical protein gene gene1516 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1479 Amir_1480 Amir_1480 Amir_1480 1633798 1633977 + protein of unknown function DUF397 PFAM: protein of unknown function DUF397 gene gene1517 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1480 Amir_1481 Amir_1481 Amir_1481 1634388 1635326 - hypothetical protein KEGG: ade:Adeh_2732 heat repeat-containing PBS lyase gene gene1518 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1481 Amir_1482 Amir_1482 Amir_1482 1635407 1636330 - hypothetical protein gene gene1519 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1482 Amir_1483 Amir_1483 Amir_1483 1637021 1638931 - putative signal transduction protein with Nacht domain KEGG: ade:Adeh_1681 PE-PGRS family protein gene gene1520 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1483 Amir_1484 Amir_1484 Amir_1484 1639091 1640584 - aldehyde dehydrogenase PFAM: Aldehyde Dehydrogenase~KEGG: ppw:PputW619_1998 aldehyde dehydrogenase gene gene1521 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1484 Amir_1485 Amir_1485 Amir_1485 1640581 1641405 - NAD-dependent epimerase/dehydratase PFAM: NAD-dependent epimerase/dehydratase%3B 3-beta hydroxysteroid dehydrogenase/isomerase%3B Male sterility domain%3B polysaccharide biosynthesis protein CapD%3B short- chain dehydrogenase/reductase SDR~KEGG: pst:PSPTO_1053 hypothetical protein gene gene1522 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1485 Amir_1486 Amir_1486 Amir_1486 1641430 1642212 - transcriptional regulator%2C IclR family PFAM: regulatory protein IclR%3B Transcriptional regulator IclR~SMART: regulatory protein IclR~KEGG: bpt:Bpet4676 IclR family transcriptional regulator gene gene1523 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1486 Amir_1487 Amir_1487 Amir_1487 1642464 1643456 + 5-dehydro-4-deoxyglucarate dehydratase PFAM: dihydrodipicolinate synthetase~KEGG: csa:Csal_2487 5-dehydro-4-deoxyglucarate dehydratase gene gene1524 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1487 Amir_1488 Amir_1488 Amir_1488 1643453 1644709 + Mandelate racemase/muconate lactonizing protein PFAM: Mandelate racemase/muconate lactonizing protein~KEGG: hypothetical protein%3B K01706 glucarate dehydratase gene gene1525 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1488 Amir_1489 Amir_1489 Amir_1489 1644703 1645836 + conserved hypothetical protein KEGG: rle:pRL100423 hypothetical protein gene gene1526 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1489 Amir_1490 Amir_1490 Amir_1490 1645887 1646390 + hypothetical protein gene gene1527 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1490 Amir_1491 Amir_1491 Amir_1491 1646491 1647039 + hypothetical protein KEGG: hypothetical protein gene gene1528 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1491 Amir_1492 Amir_1492 Amir_1492 1647116 1648780 - hydro-lyase%2C Fe-S type%2C tartrate/fumarate subfamily%2C beta subunit TIGRFAM: hydro-lyase%2C Fe-S type%2C tartrate/fumarate subfamily%2C beta subunit%3B hydro-lyase%2C Fe-S type%2C tartrate/fumarate subfamily%2C alpha subunit~PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region%3B Fe-S type hydro-lyase tartrate/fumarate beta region~KEGG: mxa:MXAN_3162 fumarate hydratase%2C class I gene gene1529 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1492 Amir_1493 Amir_1493 Amir_1493 1649131 1650123 - RNA polymerase%2C sigma 70 subunit%2C RpoD subfamily TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family~PFAM: sigma-70 region 3 domain protein%3B sigma-70 region 2 domain protein%3B sigma-70 region 1.2%3B sigma-70 region 4 domain protein~KEGG: bha:BH1376 RNA polymerase sigma factor RpoD gene gene1530 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1493 Amir_1494 Amir_1494 Amir_1494 1650344 1650769 - D-tyrosyl-tRNA(Tyr) deacylase TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase~PFAM: D-tyrosyl-tRNA(Tyr) deacylase~KEGG: psa:PST_0330 D-tyrosyl-tRNA deacylase gene gene1531 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1494 Amir_1495 Amir_1495 Amir_1495 1650766 1652262 - methyltransferase small PFAM: methyltransferase small~KEGG: sus:Acid_0229 methyltransferase small gene gene1532 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1495 Amir_1496 Amir_1496 Amir_1496 1652363 1653871 - putative transcriptional regulator%2C PucR family KEGG: bha:BH1072 hypothetical protein gene gene1533 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1496 Amir_1497 Amir_1497 Amir_1497 1653949 1654269 + hypothetical protein gene gene1534 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1497 Amir_1498 Amir_1498 Amir_1498 1654251 1655153 - PfkB domain protein PFAM: PfkB domain protein~KEGG: oan:Oant_2477 PfkB domain protein gene gene1535 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1498 Amir_1499 Amir_1499 Amir_1499 1655150 1656058 - Indigoidine synthase A family protein PFAM: Indigoidine synthase A family protein~KEGG: swd:Swoo_1446 indigoidine synthase A family protein gene gene1536 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1499 Amir_1500 Amir_1500 Amir_1500 1656090 1656335 + hypothetical protein gene gene1537 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1500 Amir_1501 Amir_1501 Amir_1501 1656429 1657724 - ribonuclease BN PFAM: ribonuclease BN~KEGG: ppu:PP_4560 ribonuclease BN%2C putative gene gene1538 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1501 Amir_1502 Amir_1502 Amir_1502 1657917 1659635 + type III restriction protein res subunit PFAM: type III restriction protein res subunit~SMART: DEAD-like helicase~KEGG: sde:Sde_1925 GGDEF family protein gene gene1539 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1502 Amir_1503 Amir_1503 Amir_1503 1660627 1661763 + Monosaccharide-transporting ATPase KEGG: scl:sce6008 xylose binding protein transport system gene gene1540 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1503 Amir_1504 Amir_1504 Amir_1504 1661861 1662634 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: acr:Acry_1972 ABC transporter related gene gene1541 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1504 Amir_1505 Amir_1505 Amir_1505 1662634 1664124 + inner-membrane translocator PFAM: inner-membrane translocator~KEGG: xylH%3B ABC transporter membrane spanning protein (xylose) gene gene1542 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1505 Amir_1506 Amir_1506 Amir_1506 1664126 1665298 + ROK family protein PFAM: ROK family protein~KEGG: bha:BH2758 transcriptional repressor of the xylose operon gene gene1543 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1506 Amir_1507 Amir_1507 Amir_1507 1665838 1666017 - hypothetical protein gene gene1544 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1507 Amir_1508 Amir_1508 Amir_1508 1666546 1667103 + hypothetical protein KEGG: NACA%2C TEBP%3B nascent polypeptide-associated complex alpha subunit gene gene1545 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1508 Amir_1509 Amir_1509 Amir_1509 1667194 1668501 - RNA polymerase%2C sigma 70 subunit%2C RpoD subfamily TIGRFAM: RNA polymerase sigma factor RpoD%3B RNA polymerase sigma factor%2C sigma-70 family~PFAM: sigma-70 region 3 domain protein%3B sigma-70 region 2 domain protein%3B sigma-70 region 1.2%3B sigma-70 region 4 domain protein~KEGG: bha:BH1376 RNA polymerase sigma factor RpoD gene gene1546 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1509 Amir_1510 Amir_1510 Amir_1510 1668710 1669471 - Polyphosphate--glucose phosphotransferase PFAM: ROK family protein~KEGG: asa:ASA_3376 ROK family protein gene gene1547 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1510 Amir_1511 Amir_1511 Amir_1511 1669566 1670366 + Inositol-phosphate phosphatase PFAM: inositol monophosphatase~KEGG: noc:Noc_0719 inositol-1(or 4)-monophosphatase gene gene1548 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1511 Amir_1512 Amir_1512 Amir_1512 1670839 1671546 - hypothetical protein gene gene1549 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1512 Amir_1513 Amir_1513 Amir_1513 1671965 1672264 + hypothetical protein gene gene1550 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1513 Amir_1514 Amir_1514 Amir_1514 1672857 1673381 - hypothetical protein gene gene1551 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1514 Amir_1515 Amir_1515 Amir_1515 1673421 1673888 + deoxyuridine 5'-triphosphate nucleotidohydrolase Dut KEGG: eli:ELI_10525 deoxyuridine 5'-triphosphate nucleotidohydrolase~TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut~PFAM: deoxyUTP pyrophosphatase gene gene1552 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1515 Amir_1516 Amir_1516 Amir_1516 1673893 1674516 + hypothetical protein gene gene1553 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1516 Amir_1517 Amir_1517 Amir_1517 1674570 1675340 - hypothetical protein KEGG: mlo:mlr7232 hypothetical protein gene gene1554 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1517 Amir_1518 Amir_1518 Amir_1518 1675453 1675830 + nucleic acid binding OB-fold tRNA/helicase-type PFAM: nucleic acid binding OB-fold tRNA/helicase- type gene gene1555 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1518 Amir_1519 Amir_1519 Amir_1519 1675827 1676645 + hypothetical protein gene gene1556 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1519 Amir_1520 Amir_1520 Amir_1520 1676742 1677398 - TrkA-N domain protein PFAM: TrkA-N domain protein%3B TrkA-C domain protein~KEGG: rru:Rru_A1681 potassium transporter peripheral membrane component gene gene1557 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1520 Amir_1521 Amir_1521 Amir_1521 1677398 1678060 - TrkA-N domain protein PFAM: TrkA-N domain protein%3B TrkA-C domain protein~KEGG: asa:ASA_4143 potassium transporter peripheral membrane component gene gene1558 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1521 Amir_1522 Amir_1522 Amir_1522 1678144 1680168 + conserved hypothetical protein KEGG: bcb:BCB4264_A1880 hypothetical protein gene gene1559 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1522 Amir_1523 Amir_1523 Amir_1523 1680165 1681400 + deoxyribonuclease/rho motif-related TRAM PFAM: deoxyribonuclease/rho motif-related TRAM%3B (Uracil-5)-methyltransferase~KEGG: sus:Acid_5841 23S rRNA (uracil-5-)- methyltransferase RumA gene gene1560 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1523 Amir_1524 Amir_1524 Amir_1524 1681489 1683390 + deoxyxylulose-5-phosphate synthase TIGRFAM: deoxyxylulose-5-phosphate synthase~PFAM: Transketolase central region%3B Transketolase domain protein~KEGG: gsu:GSU0686 1-deoxy-D-xylulose-5-phosphate synthase gene gene1561 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1524 Amir_1525 Amir_1525 Amir_1525 1683607 1684311 + band 7 protein PFAM: band 7 protein~KEGG: bja:bll5629 hypothetical protein gene gene1562 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1525 Amir_1526 Amir_1526 Amir_1526 1684347 1685024 + two component transcriptional regulator%2C winged helix family PFAM: response regulator receiver%3B transcriptional regulator domain protein~SMART: response regulator receiver~KEGG: mca:MCA2330 DNA-binding response regulator gene gene1563 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1526 Amir_1527 Amir_1527 Amir_1527 1685125 1686156 + histidine kinase PFAM: ATP-binding region ATPase domain protein%3B histidine kinase HAMP region domain protein%3B histidine kinase A domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B histidine kinase HAMP region domain protein~KEGG: sfu:Sfum_2006 integral membrane sensor signal transduction histidine kinase gene gene1564 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1527 Amir_1528 Amir_1528 Amir_1528 1691800 1691940 - hypothetical protein gene gene1569 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1528 Amir_1529 Amir_1529 Amir_1529 1692143 1692736 - hypothetical protein KEGG: scl:sce7642 hypothetical protein gene gene1570 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1529 Amir_1530 Amir_1530 Amir_1530 1692780 1693151 - MazG nucleotide pyrophosphohydrolase PFAM: MazG nucleotide pyrophosphohydrolase~KEGG: azo:azo2136 hypothetical protein gene gene1571 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1530 Amir_1531 Amir_1531 Amir_1531 1693176 1693940 - hypothetical protein gene gene1572 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1531 Amir_1532 Amir_1532 Amir_1532 1693937 1695190 - hypothetical protein KEGG: nha:Nham_3622 OmpA/MotB gene gene1573 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1532 Amir_1533 Amir_1533 Amir_1533 1695187 1695621 - hypothetical protein gene gene1574 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1533 Amir_1534 Amir_1534 Amir_1534 1695875 1696231 - hypothetical protein gene gene1575 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1534 Amir_1535 Amir_1535 Amir_1535 1696432 1696773 - hypothetical protein gene gene1576 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1535 Amir_1536 Amir_1536 Amir_1536 1696829 1697221 - pseudogene gene1577 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1536 Amir_1537 Amir_1537 Amir_1537 1697273 1697959 + hypothetical protein KEGG: vvy:VV1763 hypothetical protein gene gene1578 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1537 Amir_1538 Amir_1538 Amir_1538 1698000 1698764 - protein of unknown function DUF72 PFAM: protein of unknown function DUF72~KEGG: xac:XAC2920 hypothetical protein gene gene1579 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1538 Amir_1539 Amir_1539 Amir_1539 1698813 1699097 + prevent-host-death family protein TIGRFAM: prevent-host-death family protein~KEGG: rlt:Rleg2_2735 prevent-host-death family protein gene gene1580 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1539 Amir_1540 Amir_1540 Amir_1540 1699085 1699498 + PilT protein domain protein PFAM: PilT protein domain protein~KEGG: bcm:Bcenmc03_4257 PilT domain-containing protein gene gene1581 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1540 Amir_1541 Amir_1541 Amir_1541 1699569 1699970 - hypothetical protein gene gene1582 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1541 Amir_1542 Amir_1542 Amir_1542 1700115 1701017 - NAD-dependent epimerase/dehydratase PFAM: NAD-dependent epimerase/dehydratase~KEGG: ank:AnaeK_0030 NAD-dependent epimerase/dehydratase gene gene1583 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1542 Amir_1543 Amir_1543 Amir_1543 1701157 1703268 - 3-hydroxyacyl-CoA dehydrogenase NAD-binding PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding%3B Enoyl-CoA hydratase/isomerase%3B 3-hydroxyacyl-CoA dehydrogenase domain protein~KEGG: sfu:Sfum_1404 3-hydroxyacyl-CoA dehydrogenase%2C NAD-binding gene gene1584 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1543 Amir_1544 Amir_1544 Amir_1544 1703265 1704485 - acetyl-CoA acetyltransferase KEGG: sfu:Sfum_1403 acetyl-CoA acetyltransferases~TIGRFAM: acetyl-CoA acetyltransferase~PFAM: Thiolase gene gene1585 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1544 Amir_1545 Amir_1545 Amir_1545 1704572 1705021 - conserved hypothetical protein KEGG: scl:sce6782 hypothetical protein gene gene1586 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1545 Amir_1546 Amir_1546 Amir_1546 1705018 1705938 - conserved hypothetical protein KEGG: scl:sce6783 hypothetical protein gene gene1587 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1546 Amir_1547 Amir_1547 Amir_1547 1706023 1706742 + transcriptional regulator%2C MerR family PFAM: regulatory protein MerR~SMART: regulatory protein MerR~KEGG: smt:Smal_2399 transcriptional regulator%2C MerR family gene gene1588 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1547 Amir_1548 Amir_1548 Amir_1548 1707050 1708294 - 3'-5' exonuclease PFAM: 3'-5' exonuclease%3B HRDC domain protein~SMART: 3'-5' exonuclease%3B HRDC domain protein~KEGG: ade:Adeh_1602 3'-5' exonuclease gene gene1589 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1548 Amir_1549 Amir_1549 Amir_1549 1708365 1709081 - two component transcriptional regulator%2C LuxR family PFAM: response regulator receiver%3B regulatory protein LuxR~SMART: response regulator receiver%3B regulatory protein LuxR~KEGG: mfa:Mfla_0447 two component LuxR family transcriptional regulator gene gene1590 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1549 Amir_1550 Amir_1550 Amir_1550 1709337 1710503 + Membrane dipeptidase PFAM: peptidase M19 renal dipeptidase~KEGG: eli:ELI_09665 putative dipeptidase gene gene1591 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1550 Amir_1551 Amir_1551 Amir_1551 1710712 1711260 - hypothetical protein gene gene1592 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1551 Amir_1552 Amir_1552 Amir_1552 1711422 1712474 + uroporphyrinogen decarboxylase KEGG: scl:sce8628 putative uroporphyrinogen decarboxylase~TIGRFAM: uroporphyrinogen decarboxylase~PFAM: Uroporphyrinogen decarboxylase (URO-D) gene gene1593 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1552 Amir_1553 Amir_1553 Amir_1553 1712471 1713892 + protoporphyrinogen oxidase KEGG: aba:Acid345_0695 protoporphyrinogen oxidase~TIGRFAM: protoporphyrinogen oxidase~PFAM: amine oxidase%3B FAD dependent oxidoreductase gene gene1594 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1553 Amir_1554 Amir_1554 Amir_1554 1713919 1714617 + Chlorite dismutase PFAM: Chlorite dismutase~KEGG: bha:BH3825 putative heme peroxidase gene gene1595 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1554 Amir_1555 Amir_1555 Amir_1555 1714673 1717909 - peptidase S8 and S53 subtilisin kexin sedolisin PFAM: peptidase S8 and S53 subtilisin kexin sedolisin~KEGG: shn:Shewana3_1740 peptidase S8 and S53%2C subtilisin%2C kexin%2C sedolisin gene gene1596 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1555 Amir_1556 Amir_1556 Amir_1556 1717933 1721006 - pseudogene gene1597 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1556 Amir_1557 Amir_1557 Amir_1557 1721459 1721944 - hypothetical protein gene gene1598 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1557 Amir_1558 Amir_1558 Amir_1558 1722016 1722375 - hypothetical protein gene gene1599 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1558 Amir_1559 Amir_1559 Amir_1559 1722372 1723172 - protein of unknown function DUF692 PFAM: protein of unknown function DUF692%3B Xylose isomerase domain protein TIM barrel~KEGG: scl:sce1885 hypothetical protein gene gene1600 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1559 Amir_1560 Amir_1560 Amir_1560 1723198 1723977 - hypothetical protein KEGG: hypothetical protein gene gene1601 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1560 Amir_1561 Amir_1561 Amir_1561 1724008 1724307 - hypothetical protein KEGG: scl:sce6895 hypothetical protein gene gene1602 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1561 Amir_1562 Amir_1562 Amir_1562 1724383 1725249 - hypothetical protein KEGG: erythrocyte membrane protein 1 (PfEMP1) gene gene1603 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1562 Amir_1563 Amir_1563 Amir_1563 1725221 1726132 - hypothetical protein KEGG: hypothetical protein gene gene1604 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1563 Amir_1564 Amir_1564 Amir_1564 1726173 1727093 - conserved hypothetical protein KEGG: met:M446_2019 hypothetical protein gene gene1605 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1564 Amir_1565 Amir_1565 Amir_1565 1727353 1727781 - methionine-R-sulfoxide reductase TIGRFAM: methionine-R-sulfoxide reductase~PFAM: Methionine sulfoxide reductase B~KEGG: methionine-R-sulfoxide reductase SelR%2C putative gene gene1606 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1565 Amir_1566 Amir_1566 Amir_1566 1727881 1728195 - hypothetical protein gene gene1607 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1566 Amir_1567 Amir_1567 Amir_1567 1728491 1729441 - L-asparaginase II PFAM: L-asparaginase II~KEGG: sil:SPO3349 L-asparaginase gene gene1608 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1567 Amir_1568 Amir_1568 Amir_1568 1729531 1730190 + transcriptional regulator%2C GntR family PFAM: GntR domain protein%3B regulatory protein GntR HTH~SMART: regulatory protein GntR HTH~KEGG: pde:Pden_4617 transcriptional regulator%2C GntR family gene gene1609 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1568 Amir_1569 Amir_1569 Amir_1569 1730266 1731435 - acyl-CoA dehydrogenase domain protein PFAM: acyl-CoA dehydrogenase domain protein%3B Acyl- CoA dehydrogenase type 2 domain~KEGG: bja:blr3304 acyl-CoA dehydrogenase gene gene1610 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1569 Amir_1570 Amir_1570 Amir_1570 1731465 1732616 - acyl-CoA dehydrogenase domain protein PFAM: acyl-CoA dehydrogenase domain protein%3B Acyl- CoA dehydrogenase type 2 domain~KEGG: gur:Gura_3313 acyl-CoA dehydrogenase domain- containing protein gene gene1611 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1570 Amir_1571 Amir_1571 Amir_1571 1732806 1733798 + DNA polymerase LigD%2C polymerase domain protein TIGRFAM: DNA polymerase LigD%2C polymerase domain protein~PFAM: DNA primase small subunit~KEGG: afw:Anae109_2830 DNA primase small subunit gene gene1612 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1571 Amir_1572 Amir_1572 Amir_1572 1733839 1734201 + hypothetical protein gene gene1613 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1572 Amir_1573 Amir_1573 Amir_1573 1734198 1735178 - hypothetical protein gene gene1614 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1573 Amir_1574 Amir_1574 Amir_1574 1735571 1736074 + hemaglutinin domain protein KEGG: bpy:Bphyt_2395 haemagluttinin domain protein gene gene1615 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1574 Amir_1575 Amir_1575 Amir_1575 1736307 1736579 + hypothetical protein gene gene1616 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1575 Amir_1576 Amir_1576 Amir_1576 1736832 1737497 + hypothetical protein KEGG: mpt:Mpe_A1758 hypothetical protein gene gene1617 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1576 Amir_1577 Amir_1577 Amir_1577 1738018 1739562 - TAP domain protein PFAM: TAP domain protein%3B alpha/beta hydrolase fold~KEGG: hypothetical protein gene gene1618 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1577 Amir_1578 Amir_1578 Amir_1578 1739653 1740558 + protein of unknown function DUF6 transmembrane PFAM: protein of unknown function DUF6 transmembrane~KEGG: mrd:Mrad2831_3085 hypothetical protein gene gene1619 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1578 Amir_1579 Amir_1579 Amir_1579 1740560 1741636 - ATP dependent DNA ligase PFAM: ATP dependent DNA ligase%3B ATP dependent DNA ligase domain protein~KEGG: afw:Anae109_4038 ATP-dependent DNA ligase gene gene1620 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1579 Amir_1580 Amir_1580 Amir_1580 1741688 1742476 - bifunctional deaminase-reductase domain protein PFAM: bifunctional deaminase-reductase domain protein~KEGG: jan:Jann_3421 5-amino-6-(5- phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase gene gene1621 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1580 Amir_1581 Amir_1581 Amir_1581 1742475 1743482 + AFG1-family ATPase PFAM: AFG1-family ATPase~KEGG: shn:Shewana3_0691 AFG1 family ATPase gene gene1622 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1581 Amir_1582 Amir_1582 Amir_1582 1743552 1743797 + hypothetical protein gene gene1623 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1582 Amir_1583 Amir_1583 Amir_1583 1743996 1745624 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ade:Adeh_0830 ABC transporter%2C duplicated ATPase subunits gene gene1624 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1583 Amir_1584 Amir_1584 Amir_1584 1745714 1746532 - conserved hypothetical protein KEGG: nar:Saro_1805 hypothetical protein gene gene1625 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1584 Amir_1585 Amir_1585 Amir_1585 1746582 1747619 - conserved hypothetical protein KEGG: sus:Acid_6335 hypothetical protein gene gene1626 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1585 Amir_1586 Amir_1586 Amir_1586 1747848 1749077 + ornithine aminotransferase TIGRFAM: ornithine aminotransferase~PFAM: aminotransferase class-III~KEGG: gbe:GbCGDNIH1_1948 ornithine--oxo-acid transaminase gene gene1627 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1586 Amir_1587 Amir_1587 Amir_1587 1749176 1750561 + conserved hypothetical protein KEGG: mrd:Mrad2831_2396 hypothetical protein gene gene1628 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1587 Amir_1588 Amir_1588 Amir_1588 1750591 1751295 + Phosphoglycerate mutase PFAM: Phosphoglycerate mutase~KEGG: xca:xccb100_3271 hypothetical protein gene gene1629 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1588 Amir_1589 Amir_1589 Amir_1589 1751353 1752153 + conserved hypothetical protein KEGG: mxa:MXAN_0652 hypothetical protein gene gene1630 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1589 Amir_1590 Amir_1590 Amir_1590 1752137 1752538 + conserved hypothetical protein KEGG: ank:AnaeK_1723 hypothetical protein gene gene1631 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1590 Amir_1591 Amir_1591 Amir_1591 1752618 1753628 + cell envelope-related transcriptional attenuator TIGRFAM: cell envelope-related function transcriptional attenuator%2C LytR/CpsA family~PFAM: cell envelope-related transcriptional attenuator~KEGG: bcz:BCZK4892 LytR family transcriptional regulator gene gene1632 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1591 Amir_1592 Amir_1592 Amir_1592 1753797 1754012 - hypothetical protein gene gene1633 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1592 Amir_1593 Amir_1593 Amir_1593 1754516 1756726 + phosphoesterase PA-phosphatase related PFAM: phosphoesterase PA-phosphatase related~SMART: phosphoesterase PA-phosphatase related~KEGG: hypothetical protein gene gene1634 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1593 Amir_1594 Amir_1594 Amir_1594 1757344 1757625 + hypothetical protein gene gene1635 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1594 Amir_1595 Amir_1595 Amir_1595 1757786 1760104 - SecA DEAD domain protein PFAM: SecA DEAD domain protein%3B SecA preprotein cross-linking region%3B SecA Wing and Scaffold~KEGG: sat:SYN_01036 preprotein translocase subunit SecA gene gene1636 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1595 Amir_1596 Amir_1596 Amir_1596 1760580 1760969 - conserved hypothetical protein KEGG: cak:Caul_3403 hypothetical protein gene gene1637 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1596 Amir_1597 Amir_1597 Amir_1597 1761088 1761873 + SpoOM family protein PFAM: SpoOM family protein%3B Arrestin-like-like~KEGG: shm:Shewmr7_2729 SpoOM family protein gene gene1638 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1597 Amir_1598 Amir_1598 Amir_1598 1762055 1763200 + acyl-CoA dehydrogenase domain protein PFAM: acyl-CoA dehydrogenase domain protein%3B Acyl- CoA dehydrogenase type 2 domain~KEGG: pfo:Pfl01_4696 acyl-CoA dehydrogenase-like gene gene1639 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1598 Amir_1599 Amir_1599 Amir_1599 1763290 1764486 + hypothetical protein KEGG: dac:Daci_0764 hypothetical protein gene gene1640 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1599 Amir_1600 Amir_1600 Amir_1600 1764483 1765928 + von Willebrand factor type A PFAM: von Willebrand factor type A~SMART: von Willebrand factor type A~KEGG: dac:Daci_0766 von Willebrand factor type A gene gene1641 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1600 Amir_1601 Amir_1601 Amir_1601 1765915 1766673 + hypothetical protein gene gene1642 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1601 Amir_1602 Amir_1602 Amir_1602 1766670 1767212 + Exonuclease RNase T and DNA polymerase III PFAM: Exonuclease RNase T and DNA polymerase III~SMART: Exonuclease~KEGG: scl:sce4229 putative exonuclease gene gene1643 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1602 Amir_1603 Amir_1603 Amir_1603 1767241 1767810 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: bph:Bphy_4824 TetR family transcriptional regulator gene gene1644 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1603 Amir_1604 Amir_1604 Amir_1604 1767873 1768445 - hypothetical protein gene gene1645 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1604 Amir_1605 Amir_1605 Amir_1605 1768442 1768816 - hypothetical protein gene gene1646 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1605 Amir_1606 Amir_1606 Amir_1606 1768937 1769398 - MaoC domain protein dehydratase PFAM: MaoC domain protein dehydratase~KEGG: pol:Bpro_1240 MaoC-like dehydratase gene gene1647 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1606 Amir_1607 Amir_1607 Amir_1607 1769398 1770153 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B KR domain protein~KEGG: bbr:BB0613 putative short chain dehydrogenase gene gene1648 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1607 Amir_1608 Amir_1608 Amir_1608 1770497 1771309 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B KR domain protein~KEGG: pau:PA14_43180 short chain dehydrogenase gene gene1649 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1608 Amir_1609 Amir_1609 Amir_1609 1771309 1772265 + Alcohol dehydrogenase zinc-binding domain protein PFAM: Alcohol dehydrogenase zinc-binding domain protein%3B Alcohol dehydrogenase GroES domain protein~KEGG: qor%3B quinone oxidoreductase protein gene gene1650 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1609 Amir_1610 Amir_1610 Amir_1610 1772428 1772907 - mucin-associated surface protein (MASP) KEGG: mucin-associated surface protein (MASP) gene gene1651 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1610 Amir_1611 Amir_1611 Amir_1611 1773139 1774347 - peptidase S8 and S53 subtilisin kexin sedolisin PFAM: peptidase S8 and S53 subtilisin kexin sedolisin~KEGG: mno:Mnod_8803 peptidase S8 and S53 subtilisin kexin sedolisin gene gene1652 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1611 Amir_1612 Amir_1612 Amir_1612 1774464 1775645 - sodium/hydrogen exchanger PFAM: sodium/hydrogen exchanger~KEGG: bcb:BCB4264_A4853 sodium/hydrogen exchanger family protein gene gene1653 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1612 Amir_1613 Amir_1613 Amir_1613 1775651 1776133 - TrkA-C domain protein PFAM: TrkA-C domain protein~KEGG: bcz:BCZK4776 potassium channel%2C C-terminus gene gene1654 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1613 Amir_1614 Amir_1614 Amir_1614 1776789 1777508 + cytidylate kinase KEGG: gur:Gura_1465 cytidylate kinase~TIGRFAM: cytidylate kinase~PFAM: cytidylate kinase region gene gene1655 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1614 Amir_1615 Amir_1615 Amir_1615 1777505 1778272 + phospholipid/glycerol acyltransferase PFAM: phospholipid/glycerol acyltransferase~SMART: phospholipid/glycerol acyltransferase~KEGG: bha:BH1635 hypothetical protein gene gene1656 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1615 Amir_1616 Amir_1616 Amir_1616 1778269 1779684 + small GTP-binding protein KEGG: bha:BH1638 GTP-binding protein EngA~TIGRFAM: small GTP-binding protein~PFAM: GTP-binding protein HSR1-related%3B Miro domain protein~SMART: AAA ATPase gene gene1657 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1616 Amir_1617 Amir_1617 Amir_1617 1779726 1780370 + two component transcriptional regulator%2C LuxR family PFAM: response regulator receiver%3B regulatory protein LuxR%3B Sigma-70 region 4 type 2~SMART: response regulator receiver%3B regulatory protein LuxR~KEGG: scl:sce5431 two-component system response regulator gene gene1658 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1617 Amir_1618 Amir_1618 Amir_1618 1780367 1781476 + histidine kinase PFAM: histidine kinase dimerization and phosphoacceptor region%3B ATP-binding region ATPase domain protein~KEGG: scl:sce5432 putative two-component system sensor kinase gene gene1659 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1618 Amir_1619 Amir_1619 Amir_1619 1781757 1782734 + integrase family protein PFAM: integrase family protein~KEGG: scl:sce4427 site-specific recombinase gene gene1661 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1619 Amir_1620 Amir_1620 Amir_1620 1782731 1783006 + hypothetical protein gene gene1662 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1620 Amir_1621 Amir_1621 Amir_1621 1783003 1783188 + hypothetical protein gene gene1663 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1621 Amir_1622 Amir_1622 Amir_1622 1783232 1783483 + hypothetical protein gene gene1664 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1622 Amir_1623 Amir_1623 Amir_1623 1783476 1783676 - hypothetical protein gene gene1665 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1623 Amir_1624 Amir_1624 Amir_1624 1783747 1783950 - hypothetical protein gene gene1666 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1624 Amir_1625 Amir_1625 Amir_1625 1783947 1784186 - hypothetical protein gene gene1667 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1625 Amir_1626 Amir_1626 Amir_1626 1784770 1785558 + hypothetical protein gene gene1668 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1626 Amir_1627 Amir_1627 Amir_1627 1785587 1785766 + protein of unknown function DUF397 PFAM: protein of unknown function DUF397 gene gene1669 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1627 Amir_1628 Amir_1628 Amir_1628 1785822 1786766 - hypothetical protein gene gene1670 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1628 Amir_1629 Amir_1629 Amir_1629 1786791 1787978 - hypothetical protein KEGG: bcr:BCAH187_A3991 phage minor structural protein%2C N-region gene gene1671 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1629 Amir_1630 Amir_1630 Amir_1630 1787948 1788832 - hypothetical protein gene gene1672 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1630 Amir_1631 Amir_1631 Amir_1631 1788825 1792739 - hypothetical protein KEGG: mgm:Mmc1_2162 TPR repeat-containing protein gene gene1673 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1631 Amir_1632 Amir_1632 Amir_1632 1792764 1792922 - hypothetical protein gene gene1674 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1632 Amir_1633 Amir_1633 Amir_1633 1793009 1793488 - hypothetical protein gene gene1675 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1633 Amir_1634 Amir_1634 Amir_1634 1793501 1793971 - hypothetical protein gene gene1676 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1634 Amir_1635 Amir_1635 Amir_1635 1793968 1794432 - hypothetical protein gene gene1677 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1635 Amir_1636 Amir_1636 Amir_1636 1794429 1794779 - hypothetical protein gene gene1678 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1636 Amir_1637 Amir_1637 Amir_1637 1794779 1795099 - hypothetical protein gene gene1679 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1637 Amir_1638 Amir_1638 Amir_1638 1795093 1795536 - hypothetical protein KEGG: bpy:Bphyt_0835 hypothetical protein gene gene1680 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1638 Amir_1639 Amir_1639 Amir_1639 1795533 1797497 - lipolytic protein G-D-S-L family PFAM: lipolytic protein G-D-S-L family~KEGG: similar to hCG2041257 gene gene1681 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1639 Amir_1640 Amir_1640 Amir_1640 1797501 1797680 - hypothetical protein gene gene1682 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1640 Amir_1641 Amir_1641 Amir_1641 1797677 1798336 - hypothetical protein KEGG: mno:Mnod_2529 hypothetical protein gene gene1683 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1641 Amir_1642 Amir_1642 Amir_1642 1798360 1798722 - hypothetical protein gene gene1684 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1642 Amir_1643 Amir_1643 Amir_1643 1798715 1798969 - hypothetical protein gene gene1685 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1643 Amir_1644 Amir_1644 Amir_1644 1799059 1799370 - hypothetical protein gene gene1686 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1644 Amir_1645 Amir_1645 Amir_1645 1799372 1800592 - hypothetical protein KEGG: bcr:BCAH187_A3735 hypothetical protein gene gene1687 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1645 Amir_1646 Amir_1646 Amir_1646 1800706 1801410 - hypothetical protein KEGG: azc:AZC_1123 hypothetical protein gene gene1688 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1646 Amir_1647 Amir_1647 Amir_1647 1801435 1801707 - conserved hypothetical protein KEGG: nwi:Nwi_1556 hypothetical protein gene gene1689 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1647 Amir_1648 Amir_1648 Amir_1648 1801731 1801940 - hypothetical protein gene gene1690 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1648 Amir_1649 Amir_1649 Amir_1649 1802067 1802546 + hypothetical protein gene gene1691 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1649 Amir_1650 Amir_1650 Amir_1650 1802599 1803663 - hypothetical protein KEGG: ade:Adeh_2705 response regulator receiver gene gene1692 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1650 Amir_1651 Amir_1651 Amir_1651 1803663 1805273 - hypothetical protein gene gene1693 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1651 Amir_1652 Amir_1652 Amir_1652 1805405 1805812 + hypothetical protein gene gene1694 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1652 Amir_1653 Amir_1653 Amir_1653 1805793 1807106 - phage terminase%2C large subunit%2C PBSX family TIGRFAM: phage terminase%2C large subunit%2C PBSX family~PFAM: protein of unknown function DUF264 gene gene1695 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1653 Amir_1654 Amir_1654 Amir_1654 1807103 1807738 - hypothetical protein gene gene1696 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1654 Amir_1655 Amir_1655 Amir_1655 1807990 1808364 - hypothetical protein gene gene1697 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1655 Amir_1656 Amir_1656 Amir_1656 1808361 1808660 - hypothetical protein KEGG: seg:SG1189 predicted phage regulatory protein gene gene1698 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1656 Amir_1657 Amir_1657 Amir_1657 1808657 1809127 - hypothetical protein gene gene1699 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1657 Amir_1658 Amir_1658 Amir_1658 1809139 1810431 - PE-PGRS family protein KEGG: ade:Adeh_1681 PE-PGRS family protein gene gene1700 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1658 Amir_1659 Amir_1659 Amir_1659 1810785 1811369 + NUDIX hydrolase PFAM: NUDIX hydrolase~KEGG: dar:Daro_0963 NUDIX hydrolase gene gene1701 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1659 Amir_1660 Amir_1660 Amir_1660 1811836 1812789 - hypothetical protein gene gene1702 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1660 Amir_1661 Amir_1661 Amir_1661 1813199 1813957 + putative integral membrane sensor protein PFAM: MHYT domain protein~KEGG: sde:Sde_0524 putative integral membrane sensor protein gene gene1703 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1661 Amir_1662 Amir_1662 Amir_1662 1814020 1814577 + Ribonuclease H PFAM: ribonuclease H~KEGG: bte:BTH_I2790 RNase H gene gene1704 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1662 Amir_1663 Amir_1663 Amir_1663 1814767 1815402 + hypothetical protein KEGG: hypothetical protein gene gene1705 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1663 Amir_1664 Amir_1664 Amir_1664 1815524 1817614 - hypothetical protein KEGG: bcj:BCAM2418 putative haemagglutinin-related autotransporter protein gene gene1706 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1664 Amir_1665 Amir_1665 Amir_1665 1817991 1819694 - Alpha-galactosidase KEGG: alpha-galactosidase%2C putative / melibiase%2C putative / alpha-D-galactoside galactohydrolase%2C putative%3B K07407 alpha-galactosidase~PFAM: Ricin B lectin%3B glycoside hydrolase clan GH- D~SMART: Ricin B lectin gene gene1707 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1665 Amir_1666 Amir_1666 Amir_1666 1820073 1821461 + transcriptional regulator%2C XRE family SMART: helix-turn-helix domain protein~KEGG: scl:sce8759 hypothetical protein gene gene1708 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1666 Amir_1667 Amir_1667 Amir_1667 1821436 1821897 - hypothetical protein gene gene1709 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1667 Amir_1668 Amir_1668 Amir_1668 1822290 1823048 + hypothetical protein KEGG: msl:Msil_3349 hypothetical protein gene gene1710 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1668 Amir_1669 Amir_1669 Amir_1669 1823045 1824178 + hypothetical protein KEGG: mag:amb3212 periplasmic protein TonB%2C links inner and outer membranes gene gene1711 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1669 Amir_1670 Amir_1670 Amir_1670 1824222 1824917 - urea ABC transporter%2C ATP-binding protein UrtE KEGG: rso:RSc2037 ABC transporter ATP-binding protein~TIGRFAM: urea ABC transporter%2C ATP-binding protein UrtE~PFAM: ABC transporter related~SMART: AAA ATPase gene gene1712 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1670 Amir_1671 Amir_1671 Amir_1671 1824917 1825663 - urea ABC transporter%2C ATP-binding protein UrtD KEGG: scl:sce5582 putative ABC transporter ATP- binding protein~TIGRFAM: urea ABC transporter%2C ATP-binding protein UrtD~PFAM: ABC transporter related~SMART: AAA ATPase gene gene1713 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1671 Amir_1672 Amir_1672 Amir_1672 1825660 1826838 - urea ABC transporter%2C permease protein UrtC TIGRFAM: urea ABC transporter%2C permease protein UrtC~PFAM: inner-membrane translocator~KEGG: scl:sce5581 putative branched-chain amino acid ABC transporter%2C permease protein gene gene1714 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1672 Amir_1673 Amir_1673 Amir_1673 1826835 1827713 - urea ABC transporter%2C permease protein UrtB TIGRFAM: urea ABC transporter%2C permease protein UrtB~PFAM: inner-membrane translocator~KEGG: scl:sce5580 putative branched-chain amino acid ABC transporter%2C permease protein gene gene1715 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1673 Amir_1674 Amir_1674 Amir_1674 1827715 1828938 - urea ABC transporter%2C urea binding protein TIGRFAM: urea ABC transporter%2C urea binding protein~PFAM: Extracellular ligand-binding receptor~KEGG: scl:sce5579 putative branched-chain amino acid transport system substrate-binding protein gene gene1716 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1674 Amir_1675 Amir_1675 Amir_1675 1829213 1830340 + protein of unknown function DUF405 PFAM: protein of unknown function DUF405%3B protein of unknown function DUF418~KEGG: bha:BH0583 hypothetical protein gene gene1717 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1675 Amir_1676 Amir_1676 Amir_1676 1830337 1832283 - adenylyl cyclase class-3/4/guanylyl cyclase KEGG: sde:Sde_0054 adenylyl cyclase class- 3/4/guanylyl cyclase gene gene1718 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1676 Amir_1677 Amir_1677 Amir_1677 1832382 1833689 - ROK family protein PFAM: ROK family protein~KEGG: rlt:Rleg2_2328 ROK family protein gene gene1719 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1677 Amir_1678 Amir_1678 Amir_1678 1833856 1835517 + extracellular solute-binding protein family 5 PFAM: extracellular solute-binding protein family 5~KEGG: scl:sce8424 ABC-type dipeptide transport system%2C periplasmic component gene gene1720 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1678 Amir_1679 Amir_1679 Amir_1679 1835514 1836557 + oligopeptide/dipeptide ABC transporter%2C ATPase subunit KEGG: scl:sce4298 ABC-type oligopeptide transport system%2C ATPase component~TIGRFAM: oligopeptide/dipeptide ABC transporter%2C ATPase subunit~PFAM: ABC transporter related%3B Oligopeptide/dipeptide ABC transporter domain protein~SMART: AAA ATPase gene gene1721 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1679 Amir_1680 Amir_1680 Amir_1680 1836554 1837534 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: scl:sce4301 peptide ABC transporter%2C permease protein gene gene1722 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1680 Amir_1681 Amir_1681 Amir_1681 1837538 1838614 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: sit:TM1040_2743 binding-protein-dependent transport systems inner membrane component gene gene1723 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1681 Amir_1682 Amir_1682 Amir_1682 1838611 1839615 + oligopeptide/dipeptide ABC transporter%2C ATPase subunit KEGG: scl:sce4299 peptide ABC transporter%2C ATP- binding protein~TIGRFAM: oligopeptide/dipeptide ABC transporter%2C ATPase subunit~PFAM: ABC transporter related%3B Oligopeptide/dipeptide ABC transporter domain protein~SMART: AAA ATPase gene gene1724 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1682 Amir_1683 Amir_1683 Amir_1683 1839636 1841039 + beta-galactosidase KEGG: rfr:Rfer_1102 beta-glucosidase~TIGRFAM: beta-galactosidase~PFAM: glycoside hydrolase family 1 gene gene1725 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1683 Amir_1684 Amir_1684 Amir_1684 1841213 1842778 + hypothetical protein KEGG: hypothetical protein LOC758923 gene gene1726 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1684 Amir_1685 Amir_1685 Amir_1685 1842769 1843434 + protein serine/threonine phosphatase PFAM: Protein phosphatase 2C-like~SMART: protein phosphatase 2C domain protein~KEGG: cti:RALTA_A2171 putative serine/threonine protein phosphatase%2C P2C family gene gene1727 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1685 Amir_1686 Amir_1686 Amir_1686 1843431 1843991 + hypothetical protein gene gene1728 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1686 Amir_1687 Amir_1687 Amir_1687 1844064 1844288 + hypothetical protein gene gene1729 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1687 Amir_1688 Amir_1688 Amir_1688 1844502 1844981 + TspO and MBR like protein PFAM: TspO/MBR family protein~KEGG: xca:xccb100_2086 peripheral-type benzodiazepine receptor gene gene1730 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1688 Amir_1689 Amir_1689 Amir_1689 1845119 1845670 + protein of unknown function DUF664 PFAM: protein of unknown function DUF664 gene gene1731 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1689 Amir_1690 Amir_1690 Amir_1690 1845791 1846897 - Holliday junction DNA helicase RuvB KEGG: azo:azo0601 Holliday junction DNA helicase B~TIGRFAM: Holliday junction DNA helicase RuvB~PFAM: AAA ATPase central domain protein%3B Holliday junction DNA helicase RuvB domain%3B magnesium chelatase ChlI subunit%3B ATPase associated with various cellular activities AAA_5~SMART: AAA ATPase gene gene1732 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1690 Amir_1691 Amir_1691 Amir_1691 1846894 1847490 - Holliday junction DNA helicase RuvA KEGG: ade:Adeh_0952 Holliday junction DNA helicase RuvA~TIGRFAM: Holliday junction DNA helicase RuvA~PFAM: DNA recombination protein RuvA domain I%3B RuvA domain protein~SMART: Helix-hairpin-helix DNA-binding class 1 gene gene1733 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1691 Amir_1692 Amir_1692 Amir_1692 1847487 1848479 - crossover junction endodeoxyribonuclease RuvC KEGG: tgr:Tgr7_2236 crossover junction endodeoxyribonuclease~TIGRFAM: crossover junction endodeoxyribonuclease RuvC~PFAM: Crossover junction endodeoxyribonuclease RuvC gene gene1734 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1692 Amir_1693 Amir_1693 Amir_1693 1848685 1850268 + diguanylate cyclase KEGG: dvm:DvMF_0211 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)~TIGRFAM: diguanylate cyclase~PFAM: GGDEF domain containing protein~SMART: GGDEF domain containing protein gene gene1735 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1693 Amir_1694 Amir_1694 Amir_1694 1850628 1851029 + preprotein translocase%2C YajC subunit TIGRFAM: preprotein translocase%2C YajC subunit~PFAM: YajC family protein~KEGG: mag:amb2515 preprotein translocase subunit YajC gene gene1736 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1694 Amir_1695 Amir_1695 Amir_1695 1851179 1853077 + protein-export membrane protein SecD TIGRFAM: protein-export membrane protein SecD%3B protein-export membrane protein%2C SecD/SecF family~PFAM: SecD/SecF/SecDF export membrane protein~KEGG: oca:OCAR_6254 protein-export membrane protein SecD gene gene1737 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1695 Amir_1696 Amir_1696 Amir_1696 1853079 1854269 + protein-export membrane protein SecF TIGRFAM: protein-export membrane protein SecF%3B protein-export membrane protein%2C SecD/SecF family~PFAM: SecD/SecF/SecDF export membrane protein~KEGG: cbc:CbuK_1009 protein translocase subunit gene gene1738 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1696 Amir_1697 Amir_1697 Amir_1697 1854293 1854784 + Adenine phosphoribosyltransferase PFAM: phosphoribosyltransferase~KEGG: scl:sce2983 putative adenine phosphoribosyltransferase gene gene1739 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1697 Amir_1698 Amir_1698 Amir_1698 1854932 1857232 + (p)ppGpp synthetase I%2C SpoT/RelA KEGG: bha:BH1242 GTP pyrophosphokinase (stringent response)~TIGRFAM: RelA/SpoT family protein~PFAM: RelA/SpoT domain protein%3B TGS domain protein%3B amino acid-binding ACT domain protein%3B metal-dependent phosphohydrolase HD sub domain~SMART: metal-dependent phosphohydrolase HD region gene gene1740 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1698 Amir_1699 Amir_1699 Amir_1699 1857403 1858248 - peptidyl-prolyl cis-trans isomerase cyclophilin type PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type~KEGG: hypothetical protein%3B K01802 peptidylprolyl isomerase gene gene1741 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1699 Amir_1700 Amir_1700 Amir_1700 1858464 1859168 + beta-lactamase domain protein PFAM: beta-lactamase domain protein~KEGG: glo:Glov_3342 beta-lactamase domain protein gene gene1742 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1700 Amir_1701 Amir_1701 Amir_1701 1859178 1860443 + histidyl-tRNA synthetase KEGG: cvi:CV_3537 histidyl-tRNA synthetase~TIGRFAM: histidyl-tRNA synthetase~PFAM: tRNA synthetase class II (G H P and S)%3B Anticodon-binding domain protein gene gene1743 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1701 Amir_1702 Amir_1702 Amir_1702 1860458 1861144 + hypothetical protein gene gene1744 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1702 Amir_1703 Amir_1703 Amir_1703 1861201 1861602 - hypothetical protein gene gene1745 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1703 Amir_1704 Amir_1704 Amir_1704 1862025 1862888 - spermidine synthase-like protein KEGG: mxa:MXAN_2295 hypothetical protein gene gene1746 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1704 Amir_1705 Amir_1705 Amir_1705 1862983 1863336 + protein of unknown function DUF1304 PFAM: protein of unknown function DUF1304~KEGG: atc:AGR_L_3168 hypothetical protein gene gene1747 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1705 Amir_1706 Amir_1706 Amir_1706 1863263 1864804 - YibE/F family protein PFAM: YibE/F family protein~KEGG: mgm:Mmc1_2300 YibE/F family protein gene gene1748 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1706 Amir_1707 Amir_1707 Amir_1707 1864829 1865713 + hypothetical protein gene gene1749 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1707 Amir_1708 Amir_1708 Amir_1708 1865827 1866204 + conserved hypothetical protein KEGG: acp:A2cp1_3441 hypothetical protein gene gene1750 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1708 Amir_1709 Amir_1709 Amir_1709 1866345 1866932 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: mxa:MXAN_0079 transcriptional regulator%2C TetR family gene gene1751 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1709 Amir_1710 Amir_1710 Amir_1710 1867353 1868351 + hypothetical protein KEGG: dal:Dalk_2661 wyosine base formation gene gene1752 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1710 Amir_1711 Amir_1711 Amir_1711 1868348 1869966 + pseudogene gene1753 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1711 Amir_1712 Amir_1712 Amir_1712 1869963 1871558 + Propionyl-CoA carboxylase PFAM: carboxyl transferase~KEGG: ppu:PP_4065 propionyl-CoA carboxylase gene gene1754 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1712 Amir_1713 Amir_1713 Amir_1713 1871566 1873596 + Carbamoyl-phosphate synthase L chain ATP- binding PFAM: Carbamoyl-phosphate synthase L chain ATP- binding%3B biotin carboxylase domain protein%3B protein of unknown function DUF201%3B biotin/lipoyl attachment domain- containing protein%3B Carbamoyl-phosphate synthetase large chain domain protein~KEGG: bra:BRADO6875 putative biotin carboxylase gene gene1755 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1713 Amir_1714 Amir_1714 Amir_1714 1873593 1874753 + acyl-CoA dehydrogenase domain protein PFAM: acyl-CoA dehydrogenase domain protein%3B Acyl- CoA dehydrogenase type 2 domain~KEGG: bxe:Bxe_C0513 putative acyl-CoA dehydrogenase gene gene1756 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1714 Amir_1715 Amir_1715 Amir_1715 1874794 1875762 - hypothetical protein KEGG: ccs:CCNA_00655 hypothetical protein gene gene1757 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1715 Amir_1716 Amir_1716 Amir_1716 1876296 1876469 - hypothetical protein gene gene1758 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1716 Amir_1717 Amir_1717 Amir_1717 1876598 1877743 + peptidase S8 and S53 subtilisin kexin sedolisin PFAM: peptidase S8 and S53 subtilisin kexin sedolisin%3B proteinase inhibitor I9 subtilisin propeptide~KEGG: mca:MCA0875 serine protease gene gene1759 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1717 Amir_1718 Amir_1718 Amir_1718 1878010 1879203 + peptidase S8 and S53 subtilisin kexin sedolisin PFAM: peptidase S8 and S53 subtilisin kexin sedolisin%3B proteinase inhibitor I9 subtilisin propeptide~KEGG: swd:Swoo_2373 peptidase S8 and S53 subtilisin kexin sedolisin gene gene1760 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1718 Amir_1719 Amir_1719 Amir_1719 1879378 1881156 + aspartyl-tRNA synthetase TIGRFAM: aspartyl-tRNA synthetase~PFAM: tRNA synthetase class II (D K and N)%3B GAD domain protein%3B nucleic acid binding OB-fold tRNA/helicase- type~KEGG: tgr:Tgr7_2240 aspartyl-tRNA synthetase gene gene1761 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1719 Amir_1720 Amir_1720 Amir_1720 1881662 1882846 + hypothetical protein KEGG: lpp:plpp0130 hypothetical protein gene gene1762 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1720 Amir_1721 Amir_1721 Amir_1721 1883100 1884374 - glycosyl transferase family 2 PFAM: glycosyl transferase family 2%3B GtrA family protein~KEGG: ppd:Ppro_2693 glycosyl transferase family protein gene gene1763 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1721 Amir_1722 Amir_1722 Amir_1722 1884413 1886338 - glycosyl transferase family 39 PFAM: glycosyl transferase family 39~KEGG: bsu:BSU12880 hypothetical protein gene gene1764 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1722 Amir_1723 Amir_1723 Amir_1723 1886424 1887908 - histidine kinase PFAM: ATP-binding region ATPase domain protein%3B histidine kinase HAMP region domain protein%3B histidine kinase A domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B histidine kinase HAMP region domain protein~KEGG: sus:Acid_6896 heavy metal sensor signal transduction histidine kinase gene gene1765 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1723 Amir_1724 Amir_1724 Amir_1724 1887886 1888617 - two component transcriptional regulator%2C winged helix family PFAM: response regulator receiver%3B transcriptional regulator domain protein~SMART: response regulator receiver~KEGG: bat:BAS2056 DNA-binding response regulator gene gene1766 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1724 Amir_1725 Amir_1725 Amir_1725 1888831 1889538 + hypothetical protein KEGG: bce:BC0440 surface protein gene gene1767 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1725 Amir_1726 Amir_1726 Amir_1726 1889771 1890394 + copper resistance protein CopC PFAM: copper resistance protein CopC~KEGG: rpc:RPC_2426 copper resistance D gene gene1768 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1726 Amir_1727 Amir_1727 Amir_1727 1890678 1891280 + Uracil-DNA glycosylase superfamily PFAM: Uracil-DNA glycosylase superfamily~KEGG: scl:sce5098 G/U mismatch-specific DNA glycosylase gene gene1769 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1727 Amir_1728 Amir_1728 Amir_1728 1891218 1891976 - protein of unknown function DUF742 PFAM: protein of unknown function DUF742~KEGG: hypothetical protein gene gene1770 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1728 Amir_1729 Amir_1729 Amir_1729 1892166 1892441 + RNA-binding S4 domain protein PFAM: RNA-binding S4 domain protein~SMART: RNA-binding S4 domain protein~KEGG: dps:DP2177 hypothetical protein gene gene1771 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1729 Amir_1730 Amir_1730 Amir_1730 1893873 1895276 + exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase KEGG: ank:AnaeK_2858 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase~TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase~PFAM: sugar transferase gene gene1772 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1730 Amir_1731 Amir_1731 Amir_1731 1895276 1896370 + oxidoreductase domain protein PFAM: oxidoreductase domain protein%3B Oxidoreductase domain~KEGG: ret:RHE_CH01364 oxidoreductase protein gene gene1773 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1731 Amir_1732 Amir_1732 Amir_1732 1896367 1896969 + dTDP-4-dehydrorhamnose 3%2C5-epimerase KEGG: cvi:CV_4013 dTDP-6-deoxy-D-glucose-3%2C5 epimerase~TIGRFAM: dTDP-4-dehydrorhamnose 3%2C5-epimerase~PFAM: dTDP-4-dehydrorhamnose 35-epimerase related gene gene1774 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1732 Amir_1733 Amir_1733 Amir_1733 1896966 1897940 + NAD-dependent epimerase/dehydratase PFAM: NAD-dependent epimerase/dehydratase%3B 3-beta hydroxysteroid dehydrogenase/isomerase%3B Male sterility domain%3B polysaccharide biosynthesis protein CapD%3B dTDP-4- dehydrorhamnose reductase%3B short-chain dehydrogenase/reductase SDR~KEGG: rlt:Rleg2_6416 NAD-dependent epimerase/dehydratase gene gene1775 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1733 Amir_1734 Amir_1734 Amir_1734 1897937 1899052 + DegT/DnrJ/EryC1/StrS aminotransferase PFAM: DegT/DnrJ/EryC1/StrS aminotransferase%3B aromatic amino acid beta-eliminating lyase/threonine aldolase%3B Cys/Met metabolism pyridoxal-phosphate-dependent protein~KEGG: mrd:Mrad2831_4616 DegT/DnrJ/EryC1/StrS aminotransferase gene gene1776 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1734 Amir_1735 Amir_1735 Amir_1735 1899295 1904178 + conserved hypothetical protein KEGG: rle:pRL90161 hypothetical protein gene gene1777 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1735 Amir_1736 Amir_1736 Amir_1736 1904193 1904849 + transferase hexapeptide repeat containing protein PFAM: transferase hexapeptide repeat containing protein~KEGG: acetyltransferase gene gene1778 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1736 Amir_1737 Amir_1737 Amir_1737 1904846 1905943 + DegT/DnrJ/EryC1/StrS aminotransferase PFAM: DegT/DnrJ/EryC1/StrS aminotransferase%3B aromatic amino acid beta-eliminating lyase/threonine aldolase~KEGG: aba:Acid345_1081 DegT/DnrJ/EryC1/StrS aminotransferase gene gene1779 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1737 Amir_1738 Amir_1738 Amir_1738 1905940 1906545 + N-acetylglucosamine-1-phosphateuridyltransferase-like protein KEGG: xcv:XCV3714 bifunctional isomerase / acetyl transferase gene gene1780 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1738 Amir_1739 Amir_1739 Amir_1739 1906676 1908073 - O-antigen polymerase PFAM: O-antigen polymerase~KEGG: mxa:MXAN_3026 O-antigen polymerase family protein gene gene1781 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1739 Amir_1740 Amir_1740 Amir_1740 1908073 1909209 - hypothetical protein KEGG: dvu:DVU0508 translation initiation factor IF- 2 gene gene1782 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1740 Amir_1741 Amir_1741 Amir_1741 1909305 1910264 + hypothetical protein KEGG: sus:Acid_4999 peptidase S9B dipeptidylpeptidase IV subunit gene gene1783 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1741 Amir_1742 Amir_1742 Amir_1742 1910281 1910412 - hypothetical protein gene gene1784 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1742 Amir_1743 Amir_1743 Amir_1743 1910513 1911733 - transposase IS4 family protein PFAM: transposase IS4 family protein~KEGG: rme:Rmet_4154 transposase%2C IS4 family gene gene1785 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1743 Amir_1744 Amir_1744 Amir_1744 1911891 1912421 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: nar:Saro_3542 short-chain dehydrogenase/reductase SDR gene gene1786 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1744 Amir_1745 Amir_1745 Amir_1745 1912915 1914135 - glycosyl transferase group 1 KEGG: smd:Smed_4803 glycosyl transferase group 1 gene gene1787 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1745 Amir_1746 Amir_1746 Amir_1746 1914132 1915661 - polysaccharide biosynthesis protein PFAM: polysaccharide biosynthesis protein%3B virulence factor MVIN family protein%3B multi antimicrobial extrusion protein MatE~KEGG: pol:Bpro_1890 polysaccharide biosynthesis protein gene gene1788 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1746 Amir_1747 Amir_1747 Amir_1747 1915658 1916716 - glycosyl transferase family 2 PFAM: glycosyl transferase family 2~KEGG: smd:Smed_4802 glycosyl transferase family 2 gene gene1789 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1747 Amir_1748 Amir_1748 Amir_1748 1916800 1917648 + hypothetical protein KEGG: pat:Patl_2044 hypothetical protein gene gene1790 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1748 Amir_1749 Amir_1749 Amir_1749 1917690 1918949 + hypothetical protein KEGG: smd:Smed_4798 hypothetical protein gene gene1791 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1749 Amir_1750 Amir_1750 Amir_1750 1919236 1920591 + 40-residue YVTN family beta-propeller repeat protein TIGRFAM: 40-residue YVTN family beta-propeller repeat protein~PFAM: NHL repeat containing protein~KEGG: bca:BCE_2353 triple helix repeat-containing COllagen gene gene1792 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1750 Amir_1751 Amir_1751 Amir_1751 1921062 1922324 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: rce:RC1_3626 major facilitator superfamily transport protein gene gene1793 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1751 Amir_1752 Amir_1752 Amir_1752 1922419 1923273 + glycosyl transferase%2C WecB/TagA/CpsF family TIGRFAM: glycosyl transferase%2C WecB/TagA/CpsF family~PFAM: glycosyl transferase WecB/TagA/CpsF~KEGG: lch:Lcho_2341 WecB/TagA/CpsF family glycosyl transferase gene gene1794 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1752 Amir_1753 Amir_1753 Amir_1753 1923276 1925393 + glycosyl transferase family 2 PFAM: glycosyl transferase family 2~KEGG: ank:AnaeK_2727 hypothetical protein gene gene1795 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1753 Amir_1754 Amir_1754 Amir_1754 1925587 1927194 + serine/threonine protein kinase PFAM: Serine/threonine protein kinase-related%3B tyrosine protein kinase%3B protein of unknown function RIO1~SMART: serine/threonine protein kinase%3B tyrosine protein kinase~KEGG: tbd:Tbd_1700 serine/threonine protein kinase gene gene1796 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1754 Amir_1755 Amir_1755 Amir_1755 1927409 1929025 + methyl-accepting chemotaxis sensory transducer PFAM: chemotaxis sensory transducer%3B histidine kinase HAMP region domain protein~SMART: chemotaxis sensory transducer%3B histidine kinase HAMP region domain protein~KEGG: aba:Acid345_1672 methyl-accepting chemotaxis sensory transducer gene gene1797 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1755 Amir_1756 Amir_1756 Amir_1756 1929433 1930218 - Enoyl-CoA hydratase/isomerase PFAM: Enoyl-CoA hydratase/isomerase~KEGG: bbt:BBta_2630 putative enoyl-CoA hydratase gene gene1798 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1756 Amir_1757 Amir_1757 Amir_1757 1930294 1930761 + GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: met:M446_1745 MarR family transcriptional regulator gene gene1799 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1757 Amir_1758 Amir_1758 Amir_1758 1930861 1931406 + transcriptional regulator%2C LuxR family PFAM: YCII-related%3B regulatory protein LuxR%3B Sigma- 70 region 4 type 2~SMART: regulatory protein LuxR~KEGG: reu:Reut_B5221 YCII-related gene gene1800 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1758 Amir_1759 Amir_1759 Amir_1759 1931594 1932055 + thioesterase superfamily protein PFAM: thioesterase superfamily protein~KEGG: acp:A2cp1_3885 thioesterase superfamily protein gene gene1801 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1759 Amir_1760 Amir_1760 Amir_1760 1932137 1932700 + hypothetical protein gene gene1802 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1760 Amir_1761 Amir_1761 Amir_1761 1932807 1934399 - amine oxidase PFAM: amine oxidase%3B FAD dependent oxidoreductase~KEGG: scl:sce3770 putative phytoene dehydrogenase- related protein gene gene1803 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1761 Amir_1762 Amir_1762 Amir_1762 1934811 1937168 + RNA binding S1 domain protein PFAM: RNA binding S1 domain protein~SMART: Resolvase RNase H domain protein fold%3B RNA binding S1 domain protein~KEGG: bja:bll7280 hypothetical protein gene gene1804 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1762 Amir_1763 Amir_1763 Amir_1763 1937262 1938287 - aldo/keto reductase PFAM: aldo/keto reductase~KEGG: rle:RL2983 putative aldo/keto reductase gene gene1805 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1763 Amir_1764 Amir_1764 Amir_1764 1938464 1939318 + conserved hypothetical protein KEGG: rfr:Rfer_1474 hypothetical protein gene gene1806 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1764 Amir_1765 Amir_1765 Amir_1765 1939422 1940177 + Enoyl-CoA hydratase/isomerase PFAM: Enoyl-CoA hydratase/isomerase~KEGG: nar:Saro_3457 enoyl-CoA hydratase/isomerase gene gene1807 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1765 Amir_1766 Amir_1766 Amir_1766 1940174 1940764 - Glyoxalase/bleomycin resistance protein/dioxygenase PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase~KEGG: vei:Veis_4651 glyoxalase/bleomycin resistance protein/dioxygenase gene gene1808 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1766 Amir_1767 Amir_1767 Amir_1767 1940928 1941077 - hypothetical protein gene gene1809 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1767 Amir_1768 Amir_1768 Amir_1768 1941360 1941641 - conserved hypothetical protein KEGG: bmn:BMA10247_A2255 hypothetical protein gene gene1810 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1768 Amir_1769 Amir_1769 Amir_1769 1941641 1943437 - SNF2 superfamily protein KEGG: SNF2 superfamily protein gene gene1811 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1769 Amir_1770 Amir_1770 Amir_1770 1943564 1944487 + ribonuclease BN PFAM: ribonuclease BN~KEGG: ppu:PP_4560 ribonuclease BN%2C putative gene gene1812 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1770 Amir_1771 Amir_1771 Amir_1771 1944575 1945168 + hypothetical protein KEGG: noc:Noc_1876 hypothetical protein gene gene1813 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1771 Amir_1772 Amir_1772 Amir_1772 1945174 1946916 - YheO domain protein PFAM: YheO domain protein%3B aminotransferase class V~KEGG: mxa:MXAN_1570 aminotransferase%2C class V gene gene1814 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1772 Amir_1773 Amir_1773 Amir_1773 1946919 1947677 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: bac:BamMC406_6166 ABC transporter related gene gene1815 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1773 Amir_1774 Amir_1774 Amir_1774 1947674 1948525 - polar amino acid ABC transporter%2C inner membrane subunit TIGRFAM: polar amino acid ABC transporter%2C inner membrane subunit~PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: bbt:BBta_2097 ABC transporter permease gene gene1816 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1774 Amir_1775 Amir_1775 Amir_1775 1948515 1949453 - extracellular solute-binding protein family 3 PFAM: extracellular solute-binding protein family 3~SMART: extracellular solute-binding protein family 3~KEGG: rle:RL0985 putative solute-binding component of ABC transporter gene gene1817 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1775 Amir_1776 Amir_1776 Amir_1776 1949620 1950015 + thioredoxin TIGRFAM: thioredoxin~PFAM: Thioredoxin domain~KEGG: ank:AnaeK_2254 thioredoxin gene gene1818 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1776 Amir_1777 Amir_1777 Amir_1777 1950286 1950678 + pyridoxamine 5'-phosphate oxidase-related FMN- binding PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding gene gene1819 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1777 Amir_1778 Amir_1778 Amir_1778 1950675 1951853 + precorrin-6y C5%2C15-methyltransferase (decarboxylating)%2C CbiE subunit KEGG: bch:Bcen2424_1675 precorrin-6y C5%2C15- methyltransferase (decarboxylating)%2C CbiE subunit~TIGRFAM: precorrin-6y C5%2C15-methyltransferase (decarboxylating)%2C CbiE subunit%3B precorrin-6Y C5%2C15- methyltransferase (decarboxylating)%2C CbiT subunit~PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase gene gene1820 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1778 Amir_1779 Amir_1779 Amir_1779 1951850 1952602 + precorrin-4 C11-methyltransferase KEGG: bov:BOV_1262 precorrin-4 C11- methyltransferase~TIGRFAM: precorrin-4 C11-methyltransferase~PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase gene gene1821 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1779 Amir_1780 Amir_1780 Amir_1780 1952602 1953327 + precorrin-6x reductase KEGG: rru:Rru_A2988 precorrin-6A reductase~TIGRFAM: precorrin-6x reductase~PFAM: Precorrin-6x reductase CbiJ/CobK gene gene1822 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1780 Amir_1781 Amir_1781 Amir_1781 1953332 1954882 - precorrin-3B C17-methyltransferase TIGRFAM: precorrin-3B C17-methyltransferase%3B precorrin-2 C20-methyltransferase~PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase~KEGG: met:M446_2442 precorrin-3B C17- methyltransferase gene gene1823 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1781 Amir_1782 Amir_1782 Amir_1782 1954879 1955505 - Precorrin-8X methylmutase PFAM: Precorrin-8X methylmutase CbiC/CobH~KEGG: pmy:Pmen_4572 precorrin-8X methylmutase gene gene1824 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1782 Amir_1783 Amir_1783 Amir_1783 1955502 1956539 - conserved hypothetical protein KEGG: bja:blr3264 hypothetical protein gene gene1825 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1783 Amir_1784 Amir_1784 Amir_1784 1956717 1960298 + cobaltochelatase%2C CobN subunit KEGG: pag:PLES_21191 cobalamin biosynthetic protein CobN~TIGRFAM: cobaltochelatase%2C CobN subunit~PFAM: CobN/magnesium chelatase gene gene1826 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1784 Amir_1785 Amir_1785 Amir_1785 1961227 1962501 + extracellular solute-binding protein family 1 PFAM: extracellular solute-binding protein family 1~KEGG: bha:BH1924 sugar transport system (sugar- binding protein) gene gene1827 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1785 Amir_1786 Amir_1786 Amir_1786 1962498 1963505 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: bha:BH1925 sugar transport system (permease) gene gene1828 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1786 Amir_1787 Amir_1787 Amir_1787 1963509 1964327 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: bha:BH1926 sugar transport system (permease) gene gene1829 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1787 Amir_1788 Amir_1788 Amir_1788 1964330 1965748 + beta-galactosidase KEGG: hch:HCH_06907 beta-glucosidase/6-phospho-beta- glucosidase/beta-galactosidase~TIGRFAM: beta-galactosidase~PFAM: glycoside hydrolase family 1 gene gene1830 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1788 Amir_1789 Amir_1789 Amir_1789 1965745 1966776 + transcriptional regulator%2C LacI family KEGG: aav:Aave_4199 transcriptional regulator%2C LacI family~PFAM: regulatory protein LacI%3B periplasmic binding protein/LacI transcriptional regulator~SMART: regulatory protein LacI gene gene1831 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1789 Amir_1790 Amir_1790 Amir_1790 1966842 1967081 - prevent-host-death family protein TIGRFAM: prevent-host-death family protein~PFAM: protein of unknown function DUF172~KEGG: psp:PSPPH_B0015 prevent-host-death family protein gene gene1832 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1790 Amir_1791 Amir_1791 Amir_1791 1967594 1970335 + cellulose-binding family II PFAM: cellulose-binding family II~SMART: cellulose-binding family II~KEGG: cja:CJA_2477 endo-1%2C4-beta- glucanase/xyloglucanase%2C putative%2C gly74A gene gene1833 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1791 Amir_1792 Amir_1792 Amir_1792 1970531 1970758 - hypothetical protein gene gene1834 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1792 Amir_1793 Amir_1793 Amir_1793 1971079 1973784 - transcriptional regulator%2C XRE family PFAM: WD-40 repeat protein~SMART: helix-turn-helix domain protein%3B WD-40 repeat protein~KEGG: scl:sce5991 protein kinase gene gene1835 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1793 Amir_1794 Amir_1794 Amir_1794 1974385 1975533 - ROK family protein PFAM: ROK family protein~KEGG: acr:Acry_0116 ROK family protein gene gene1836 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1794 Amir_1795 Amir_1795 Amir_1795 1976134 1977273 + xylose isomerase KEGG: aba:Acid345_0903 xylose isomerase~TIGRFAM: xylose isomerase~PFAM: Xylose isomerase domain protein TIM barrel gene gene1837 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1795 Amir_1796 Amir_1796 Amir_1796 1977273 1978655 + xylulokinase TIGRFAM: xylulokinase~PFAM: carbohydrate kinase FGGY~KEGG: pen:PSEEN1988 xylulokinase gene gene1838 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1796 Amir_1797 Amir_1797 Amir_1797 1979137 1979373 - hypothetical protein gene gene1839 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1797 Amir_1798 Amir_1798 Amir_1798 1979436 1980020 + hypothetical protein KEGG: afw:Anae109_0147 hypothetical protein gene gene1840 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1798 Amir_1799 Amir_1799 Amir_1799 1980017 1980271 + hypothetical protein gene gene1841 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1799 Amir_1800 Amir_1800 Amir_1800 1980268 1981011 + metallophosphoesterase PFAM: metallophosphoesterase~KEGG: mes:Meso_2768 metallophosphoesterase gene gene1842 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1800 Amir_1801 Amir_1801 Amir_1801 1981090 1981707 - cyclase/dehydrase PFAM: cyclase/dehydrase~KEGG: mfa:Mfla_0007 cyclase/dehydrase gene gene1843 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1801 Amir_1802 Amir_1802 Amir_1802 1981969 1982829 + transcriptional regulator%2C AraC family PFAM: transcription activator effector binding~SMART: helix-turn-helix- domain containing protein AraC type~KEGG: bsu:BSU05170 hypothetical protein gene gene1844 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1802 Amir_1803 Amir_1803 Amir_1803 1982881 1984059 - Alcohol dehydrogenase GroES domain protein PFAM: Alcohol dehydrogenase GroES domain protein%3B Alcohol dehydrogenase zinc-binding domain protein~KEGG: mrd:Mrad2831_6253 alcohol dehydrogenase gene gene1845 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1803 Amir_1804 Amir_1804 Amir_1804 1984174 1984575 - conserved hypothetical protein KEGG: azo:azo1781 hypothetical protein gene gene1846 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1804 Amir_1805 Amir_1805 Amir_1805 1984628 1985140 - putative two component transcriptional regulator%2C winged helix family PFAM: transcriptional regulator domain protein~KEGG: glo:Glov_0588 two component transcriptional regulator%2C winged helix family gene gene1847 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1805 Amir_1806 Amir_1806 Amir_1806 1985515 1986342 + hypothetical protein gene gene1848 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1806 Amir_1807 Amir_1807 Amir_1807 1986522 1987730 - extracellular solute-binding protein family 1 PFAM: extracellular solute-binding protein family 1~KEGG: atc:AGR_L_1009 putative sugar transport sugar binding protein gene gene1849 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1807 Amir_1808 Amir_1808 Amir_1808 1988153 1990270 + putative amino acid transporter KEGG: sus:Acid_1791 putative amino acid transporter gene gene1850 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1808 Amir_1809 Amir_1809 Amir_1809 1990627 1992981 - Kojibiose phosphorylase PFAM: glycoside hydrolase family 65 central catalytic%3B glycoside hydrolase family 65 domain protein~KEGG: mex:Mext_0562 kojibiose phosphorylase gene gene1851 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1809 Amir_1810 Amir_1810 Amir_1810 1992978 1993694 - beta-phosphoglucomutase family hydrolase TIGRFAM: beta-phosphoglucomutase family hydrolase%3B HAD-superfamily hydrolase%2C subfamily IA%2C variant 3~PFAM: Haloacid dehalogenase domain protein hydrolase~KEGG: ajs:Ajs_2161 beta-phosphoglucomutase family hydrolase gene gene1852 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1810 Amir_1811 Amir_1811 Amir_1811 1993794 1995122 + FAD-dependent pyridine nucleotide-disulphide oxidoreductase PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase~KEGG: rsh:Rsph17029_3442 cyclic nucleotide- regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase gene gene1853 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1811 Amir_1812 Amir_1812 Amir_1812 1995162 1995482 - transcriptional regulator%2C ArsR family PFAM: regulatory protein ArsR~SMART: regulatory protein ArsR~KEGG: mxa:MXAN_5617 transcriptional regulator%2C ArsR family gene gene1854 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1812 Amir_1813 Amir_1813 Amir_1813 1995611 1996258 + hypothetical protein gene gene1855 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1813 Amir_1814 Amir_1814 Amir_1814 1996298 1996621 + PODXL2%3B podocalyxin-like 2 KEGG: PODXL2%3B podocalyxin-like 2 gene gene1856 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1814 Amir_1815 Amir_1815 Amir_1815 1996849 1997349 + hypothetical protein KEGG: rpi:Rpic_3996 putative alanine-rich signal peptide protein gene gene1857 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1815 Amir_1816 Amir_1816 Amir_1816 1997398 1997685 - transcription factor WhiB PFAM: transcription factor WhiB gene gene1858 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1816 Amir_1817 Amir_1817 Amir_1817 1997743 1998606 - transcriptional regulator%2C MerR family PFAM: regulatory protein MerR~SMART: regulatory protein MerR~KEGG: scl:sce0579 MerR family transcriptional regulator gene gene1859 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1817 Amir_1818 Amir_1818 Amir_1818 1999168 1999902 + putative signal transduction histidine kinase gene gene1860 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1818 Amir_1819 Amir_1819 Amir_1819 1999939 2000274 - anti-sigma-factor antagonist TIGRFAM: anti-anti-sigma factor~PFAM: Sulfate transporter/antisigma-factor antagonist STAS~KEGG: pde:Pden_0820 anti-sigma-factor antagonist gene gene1861 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1819 Amir_1820 Amir_1820 Amir_1820 2000400 2001392 - NLP/P60 protein PFAM: NLP/P60 protein~KEGG: dvu:DVU1392 NLP/P60 family protein gene gene1862 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1820 Amir_1821 Amir_1821 Amir_1821 2001648 2002934 + hypothetical protein KEGG: sit:TM1040_2323 hypothetical protein gene gene1863 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1821 Amir_1822 Amir_1822 Amir_1822 2003094 2004383 + chitin-binding domain 3 protein PFAM: chitin-binding domain 3 protein%3B Fibronectin type III domain protein%3B cellulose-binding family II~SMART: cellulose-binding family II%3B Fibronectin type III domain protein~KEGG: pag:PLES_44661 chitin-binding protein CbpD precursor gene gene1864 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1822 Amir_1823 Amir_1823 Amir_1823 2004380 2004925 + hypothetical protein gene gene1865 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1823 Amir_1824 Amir_1824 Amir_1824 2004936 2005979 - transcriptional regulator%2C LacI family KEGG: yen:YE0107 DNA-binding transcriptional regulator CytR~PFAM: periplasmic binding protein/LacI transcriptional regulator%3B regulatory protein LacI~SMART: regulatory protein LacI gene gene1866 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1824 Amir_1825 Amir_1825 Amir_1825 2006247 2007287 + transcriptional regulator%2C LacI family KEGG: aav:Aave_4199 transcriptional regulator%2C LacI family~PFAM: periplasmic binding protein/LacI transcriptional regulator%3B regulatory protein LacI~SMART: regulatory protein LacI gene gene1867 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1825 Amir_1826 Amir_1826 Amir_1826 2007329 2009644 + glycoside hydrolase family 3 domain protein PFAM: glycoside hydrolase family 3 domain protein~KEGG: esa:ESA_02100 hypothetical protein gene gene1868 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1826 Amir_1827 Amir_1827 Amir_1827 2009767 2010693 + hypothetical protein gene gene1869 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1827 Amir_1828 Amir_1828 Amir_1828 2011077 2012039 - Acetyl xylan esterase PFAM: Acetyl xylan esterase%3B peptidase S15~KEGG: mlo:mlr6993 acetyl xylan esterase gene gene1870 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1828 Amir_1829 Amir_1829 Amir_1829 2012723 2012995 + hypothetical protein gene gene1871 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1829 Amir_1830 Amir_1830 Amir_1830 2013242 2014873 + glycoside hydrolase family 5 PFAM: glycoside hydrolase family 5%3B Fibronectin type III domain protein%3B cellulose-binding family II~SMART: cellulose-binding family II%3B Fibronectin type III domain protein~KEGG: sde:Sde_0064 putative secreted beta- mannosidase gene gene1872 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1830 Amir_1831 Amir_1831 Amir_1831 2014885 2016009 + cellulose-binding family II PFAM: cellulose-binding family II%3B lipolytic protein G-D-S-L family~SMART: cellulose-binding family II~KEGG: hypothetical protein gene gene1873 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1831 Amir_1832 Amir_1832 Amir_1832 2016181 2016582 + YCII-related protein PFAM: YCII-related~KEGG: scl:sce5148 hypothetical protein gene gene1874 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1832 Amir_1833 Amir_1833 Amir_1833 2016750 2017862 + putative RNA polymerase%2C sigma 70 family subunit TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family~PFAM: Sigma-70 region 4 type 2~KEGG: scl:sce5149 ECF subfamily RNA polymerase sigma-70 factor gene gene1875 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1833 Amir_1834 Amir_1834 Amir_1834 2018046 2018225 - protein of unknown function DUF397 PFAM: protein of unknown function DUF397 gene gene1876 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1834 Amir_1835 Amir_1835 Amir_1835 2018250 2019104 - helix-turn-helix domain protein SMART: helix-turn-helix domain protein gene gene1877 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1835 Amir_1836 Amir_1836 Amir_1836 2019292 2019525 + hypothetical protein gene gene1878 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1836 Amir_1837 Amir_1837 Amir_1837 2019522 2020394 + helix-turn-helix domain protein SMART: helix-turn-helix domain protein~KEGG: hypothetical protein gene gene1879 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1837 Amir_1838 Amir_1838 Amir_1838 2020504 2021010 - hypothetical protein gene gene1880 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1838 Amir_1839 Amir_1839 Amir_1839 2021442 2023028 + FAD-dependent pyridine nucleotide-disulphide oxidoreductase PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase%3B monooxygenase FAD-binding%3B FAD dependent oxidoreductase~KEGG: Foxred2%3B FAD-dependent oxidoreductase domain containing 2 gene gene1881 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1839 Amir_1840 Amir_1840 Amir_1840 2023192 2025039 + Alkaline phosphatase KEGG: pca:Pcar_0512 alkaline phosphatase~PFAM: Alkaline phosphatase~SMART: Alkaline phosphatase gene gene1882 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1840 Amir_1841 Amir_1841 Amir_1841 2025240 2026118 + hypothetical protein KEGG: rsh:Rsph17029_3026 hypothetical protein gene gene1883 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1841 Amir_1842 Amir_1842 Amir_1842 2026214 2027185 - transcriptional regulator%2C LacI family PFAM: regulatory protein LacI%3B periplasmic binding protein/LacI transcriptional regulator~SMART: regulatory protein LacI~KEGG: bvi:Bcep1808_3829 LacI family transcription regulator gene gene1884 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1842 Amir_1843 Amir_1843 Amir_1843 2027491 2029683 + Pectate lyase/Amb allergen PFAM: Pectate lyase/Amb allergen%3B Pectinesterase~SMART: Pectate lyase/Amb allergen~KEGG: bsu:BSU07560 pectate lyase gene gene1885 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1843 Amir_1844 Amir_1844 Amir_1844 2029680 2030555 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: smd:Smed_0187 binding-protein-dependent transport systems inner membrane component gene gene1886 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1844 Amir_1845 Amir_1845 Amir_1845 2030552 2031439 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: smd:Smed_2422 binding-protein-dependent transport systems inner membrane component gene gene1887 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1845 Amir_1846 Amir_1846 Amir_1846 2031447 2032724 + extracellular solute-binding protein family 1 PFAM: extracellular solute-binding protein family 1~KEGG: rle:pRL110364 putative substrate-binding component of ABC transporter gene gene1888 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1846 Amir_1847 Amir_1847 Amir_1847 2032721 2033869 + Mandelate racemase/muconate lactonizing protein PFAM: Mandelate racemase/muconate lactonizing protein~KEGG: ent:Ent638_2707 mandelate racemase/muconate lactonizing protein gene gene1889 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1847 Amir_1848 Amir_1848 Amir_1848 2033980 2034933 + Pectate lyase/Amb allergen PFAM: Pectate lyase/Amb allergen~SMART: Pectate lyase/Amb allergen%3B Parallel beta- helix repeat~KEGG: pectate lyase gene gene1890 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1848 Amir_1849 Amir_1849 Amir_1849 2035048 2036091 + Ketopantoate reductase ApbA/PanE domain protein PFAM: Ketopantoate reductase ApbA/PanE domain protein~KEGG: gdi:GDI0989 putative 2-dehydropantoate 2- reductase gene gene1891 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1849 Amir_1850 Amir_1850 Amir_1850 2036186 2037676 - Ricin B lectin PFAM: Ricin B lectin%3B peptidase alpha-lytic pro domain%3B peptidase S1 and S6 chymotrypsin/Hap~SMART: Ricin B lectin~KEGG: mxa:MXAN_5466 peptidase%2C S1E (streptogrisin A) subfamily gene gene1892 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1850 Amir_1851 Amir_1851 Amir_1851 2037830 2038228 - Glyoxalase/bleomycin resistance protein/dioxygenase PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase~KEGG: dde:Dde_3083 glyoxalase family protein gene gene1893 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1851 Amir_1852 Amir_1852 Amir_1852 2038339 2039337 - Monosaccharide-transporting ATPase PFAM: inner-membrane translocator~KEGG: aav:Aave_2249 inner membrane ABC transporter permease protein YjfF gene gene1894 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1852 Amir_1853 Amir_1853 Amir_1853 2039334 2040305 - Monosaccharide-transporting ATPase PFAM: inner-membrane translocator~KEGG: scl:sce3306 ribose/xylose/arabinose/galactoside ABC-type transporter permease gene gene1895 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1853 Amir_1854 Amir_1854 Amir_1854 2040302 2041819 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: bvi:Bcep1808_6551 ABC transporter related gene gene1896 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1854 Amir_1855 Amir_1855 Amir_1855 2042023 2043003 - periplasmic binding protein/LacI transcriptional regulator PFAM: periplasmic binding protein/LacI transcriptional regulator~KEGG: rpi:Rpic_4095 periplasmic binding protein/LacI transcriptional regulator gene gene1897 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1855 Amir_1856 Amir_1856 Amir_1856 2043266 2045485 + hypothetical protein KEGG: hypothetical protein gene gene1898 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1856 Amir_1857 Amir_1857 Amir_1857 2045592 2048072 + Alpha-N-arabinofuranosidase PFAM: alpha-L-arabinofuranosidase domain protein%3B Carbohydrate-binding CenC domain protein~KEGG: ASD1%3B ASD1 (ALPHA-L-ARABINOFURANOSIDASE)%3B hydrolase%2C acting on glycosyl bonds gene gene1899 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1857 Amir_1858 Amir_1858 Amir_1858 2048069 2049586 + Alpha-N-arabinofuranosidase PFAM: glycoside hydrolase family 43~KEGG: hypothetical protein gene gene1900 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1858 Amir_1859 Amir_1859 Amir_1859 2049583 2051793 + protein of unknown function DUF1680 PFAM: protein of unknown function DUF1680~SMART: LamG domain protein jellyroll fold domain protein~KEGG: hypothetical protein gene gene1901 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1859 Amir_1860 Amir_1860 Amir_1860 2051820 2052836 + transcriptional regulator%2C LacI family KEGG: scl:sce3317 HTH-type transcriptional repressor PurR~PFAM: regulatory protein LacI%3B periplasmic binding protein/LacI transcriptional regulator~SMART: regulatory protein LacI gene gene1902 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1860 Amir_1861 Amir_1861 Amir_1861 2053322 2054986 + L-ribulokinase TIGRFAM: L-ribulokinase~PFAM: carbohydrate kinase FGGY~KEGG: bha:BH1872 ribulokinase gene gene1903 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1861 Amir_1862 Amir_1862 Amir_1862 2054989 2055642 + class II aldolase/adducin family protein PFAM: class II aldolase/adducin family protein~KEGG: cko:CKO_03636 L-ribulose-5-phosphate 4- epimerase gene gene1904 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1862 Amir_1863 Amir_1863 Amir_1863 2055663 2057171 + L-arabinose isomerase PFAM: L-arabinose isomerase~KEGG: scl:sce3310 L-arabinose isomerase gene gene1905 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1863 Amir_1864 Amir_1864 Amir_1864 2057334 2058455 + putative solute-binding component of ABC transporter KEGG: rle:RL3617 putative solute-binding component of ABC transporter gene gene1906 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1864 Amir_1865 Amir_1865 Amir_1865 2058458 2059984 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: bha:BH3441 L-arabinose ABC transporter ATP- binding protein gene gene1907 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1865 Amir_1866 Amir_1866 Amir_1866 2059981 2061198 + inner-membrane translocator PFAM: inner-membrane translocator~KEGG: bha:BH3440 L-arabinose ABC transporter (permease) gene gene1908 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1866 Amir_1867 Amir_1867 Amir_1867 2061252 2062469 + hypothetical protein gene gene1909 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1867 Amir_1868 Amir_1868 Amir_1868 2062832 2065066 + cellulose-binding family II PFAM: cellulose-binding family II~SMART: cellulose-binding family II~KEGG: cja:CJA_3559 rhamnogalacturonan lyase%2C rgl11A gene gene1910 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1868 Amir_1869 Amir_1869 Amir_1869 2065200 2066354 + parallel beta-helix repeat protein SMART: Parallel beta-helix repeat~KEGG: scl:sce5350 putative secreted protein gene gene1911 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1869 Amir_1870 Amir_1870 Amir_1870 2066451 2066780 - Antibiotic biosynthesis monooxygenase PFAM: Antibiotic biosynthesis monooxygenase~KEGG: rme:Rmet_5441 antibiotic biosynthesis monooxygenase gene gene1912 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1870 Amir_1871 Amir_1871 Amir_1871 2066879 2067880 - transcriptional regulator%2C LacI family KEGG: aav:Aave_4199 transcriptional regulator%2C LacI family~PFAM: periplasmic binding protein/LacI transcriptional regulator%3B regulatory protein LacI~SMART: regulatory protein LacI gene gene1913 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1871 Amir_1872 Amir_1872 Amir_1872 2068096 2071038 + alpha-L-arabinofuranosidase B PFAM: alpha-L-arabinofuranosidase B%3B glycoside hydrolase family 2 sugar binding%3B glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich~KEGG: sus:Acid_6668 glycoside hydrolase family protein gene gene1914 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1872 Amir_1873 Amir_1873 Amir_1873 2071212 2074439 + alpha-1%2C2-mannosidase TIGRFAM: alpha-1%2C2-mannosidase~PFAM: glycosyl hydrolase 92~KEGG: sml:Smlt2180 hypothetical protein gene gene1915 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1873 Amir_1874 Amir_1874 Amir_1874 2074586 2075710 + hypothetical protein KEGG: scl:sce2753 protein kinase gene gene1916 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1874 Amir_1875 Amir_1875 Amir_1875 2075861 2076955 - hypothetical protein KEGG: dol:Dole_0415 filamentation induced by cAMP protein Fic gene gene1917 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1875 Amir_1876 Amir_1876 Amir_1876 2076974 2077072 + hypothetical protein gene gene1918 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1876 Amir_1877 Amir_1877 Amir_1877 2077405 2078571 + Endonuclease I PFAM: Endonuclease I~KEGG: bsu:BSU32540 hypothetical protein gene gene1919 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1877 Amir_1878 Amir_1878 Amir_1878 2078591 2078842 + hypothetical protein KEGG: hypothetical protein LOC100078772 gene gene1920 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1878 Amir_1879 Amir_1879 Amir_1879 2078839 2079945 + putative signal transduction histidine kinase PFAM: ATP-binding region ATPase domain protein~KEGG: vei:Veis_0031 multi-sensor signal transduction histidine kinase gene gene1921 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1879 Amir_1880 Amir_1880 Amir_1880 2079938 2081032 + hypothetical protein gene gene1922 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1880 Amir_1881 Amir_1881 Amir_1881 2081017 2081799 + two component transcriptional regulator%2C LuxR family PFAM: response regulator receiver%3B regulatory protein LuxR~SMART: response regulator receiver%3B regulatory protein LuxR~KEGG: azo:azo0569 DNA-binding response regulator gene gene1923 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1881 Amir_1882 Amir_1882 Amir_1882 2081952 2082611 + hypothetical protein KEGG: YALI0F00990p gene gene1924 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1882 Amir_1883 Amir_1883 Amir_1883 2082682 2083647 + ribose-phosphate pyrophosphokinase KEGG: hch:HCH_00912 phosphoribosylpyrophosphate synthetase~TIGRFAM: ribose-phosphate pyrophosphokinase~PFAM: phosphoribosyltransferase gene gene1925 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1883 Amir_1884 Amir_1884 Amir_1884 2083735 2085648 - zinc finger SWIM domain protein PFAM: zinc finger SWIM domain protein~KEGG: mrd:Mrad2831_1392 zinc finger SWIM domain- containing protein gene gene1926 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1884 Amir_1885 Amir_1885 Amir_1885 2085648 2086754 - VWA containing CoxE family protein PFAM: VWA containing CoxE family protein~SMART: von Willebrand factor type A~KEGG: bur:Bcep18194_B1557 VWA containing CoxE-like protein gene gene1927 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1885 Amir_1886 Amir_1886 Amir_1886 2086751 2089204 - conserved hypothetical protein KEGG: bur:Bcep18194_B1556 hypothetical protein gene gene1928 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1886 Amir_1887 Amir_1887 Amir_1887 2089204 2090295 - ATPase associated with various cellular activities AAA_5 PFAM: ATPase associated with various cellular activities AAA_5~SMART: AAA ATPase~KEGG: MoxR-like ATPase gene gene1929 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1887 Amir_1888 Amir_1888 Amir_1888 2090462 2093761 - WGR domain-containing protein KEGG: mrd:Mrad2831_1394 WGR domain-containing protein gene gene1930 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1888 Amir_1889 Amir_1889 Amir_1889 2093898 2097158 - WGR domain-containing protein KEGG: mrd:Mrad2831_1394 WGR domain-containing protein gene gene1931 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1889 Amir_1890 Amir_1890 Amir_1890 2097267 2100581 - hypothetical protein KEGG: mrd:Mrad2831_1394 WGR domain-containing protein gene gene1932 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1890 Amir_1891 Amir_1891 Amir_1891 2100738 2101886 - glycosyl transferase group 1 PFAM: glycosyl transferase group 1~KEGG: bpt:Bpet2351 glycosyltransferase gene gene1933 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1891 Amir_1892 Amir_1892 Amir_1892 2102119 2102532 + OsmC family protein PFAM: OsmC family protein~KEGG: bch:Bcen2424_5605 OsmC family protein gene gene1934 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1892 Amir_1893 Amir_1893 Amir_1893 2102730 2103701 - hypothetical protein KEGG: hypothetical protein gene gene1935 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1893 Amir_1894 Amir_1894 Amir_1894 2103775 2105016 - hypothetical protein KEGG: nar:Saro_1805 hypothetical protein gene gene1936 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1894 Amir_1895 Amir_1895 Amir_1895 2105269 2106297 + FAD-dependent pyridine nucleotide-disulphide oxidoreductase PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase%3B HI0933 family protein~KEGG: sme:SMc01159 putative oxidoreductase protein gene gene1937 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1895 Amir_1896 Amir_1896 Amir_1896 2106355 2107893 - transcriptional regulator%2C XRE family PFAM: EPSP synthase (3-phosphoshikimate 1- carboxyvinyltransferase)%3B helix-turn-helix domain protein~SMART: helix-turn-helix domain protein~KEGG: bbt:BBta_0011 UDP-N-acetylglucosamine 1- carboxyvinyltransferase gene gene1938 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1896 Amir_1897 Amir_1897 Amir_1897 2108080 2108808 + hypothetical protein gene gene1939 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1897 Amir_1898 Amir_1898 Amir_1898 2108796 2109224 + hypothetical protein gene gene1940 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1898 Amir_1899 Amir_1899 Amir_1899 2109279 2110241 - RNA polymerase%2C sigma 70 subunit%2C RpoD subfamily TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family~PFAM: sigma-70 region 3 domain protein%3B sigma-70 region 2 domain protein%3B sigma-70 region 1.2%3B sigma-70 region 4 domain protein~KEGG: bha:BH1376 RNA polymerase sigma factor RpoD gene gene1941 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1899 Amir_1900 Amir_1900 Amir_1900 2110370 2111356 - protein of unknown function DUF344 PFAM: protein of unknown function DUF344~KEGG: tgr:Tgr7_0141 hypothetical protein gene gene1942 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1900 Amir_1901 Amir_1901 Amir_1901 2111525 2111797 + Transglycosylase-associated protein PFAM: Transglycosylase-associated protein~KEGG: csa:Csal_2587 transglycosylase-associated protein gene gene1943 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1901 Amir_1902 Amir_1902 Amir_1902 2111981 2112085 + hypothetical protein gene gene1944 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1902 Amir_1903 Amir_1903 Amir_1903 2112206 2112868 - hypothetical protein KEGG: hch:HCH_06998 hypothetical protein gene gene1945 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1903 Amir_1904 Amir_1904 Amir_1904 2112879 2113637 - hypothetical protein KEGG: acp:A2cp1_0343 hypothetical protein gene gene1946 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1904 Amir_1905 Amir_1905 Amir_1905 2113793 2114803 + Alcohol dehydrogenase GroES domain protein PFAM: Alcohol dehydrogenase GroES domain protein%3B Alcohol dehydrogenase zinc-binding domain protein~KEGG: sal:Sala_2455 alcohol dehydrogenase GroES- like protein gene gene1947 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1905 Amir_1906 Amir_1906 Amir_1906 2114951 2116000 - nitroreductase PFAM: nitroreductase~KEGG: afw:Anae109_0827 hypothetical protein gene gene1948 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1906 Amir_1907 Amir_1907 Amir_1907 2116138 2117838 + GAF sensor signal transduction histidine kinase PFAM: GAF domain protein%3B histidine kinase dimerization and phosphoacceptor region%3B ATP-binding region ATPase domain protein~SMART: GAF domain protein%3B ATP-binding region ATPase domain protein~KEGG: scl:sce2236 putative two-component system sensor kinase gene gene1949 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1907 Amir_1908 Amir_1908 Amir_1908 2117835 2118002 + hypothetical protein gene gene1950 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1908 Amir_1909 Amir_1909 Amir_1909 2117999 2118235 + hypothetical protein gene gene1951 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1909 Amir_1910 Amir_1910 Amir_1910 2118365 2119021 - two component transcriptional regulator%2C LuxR family PFAM: response regulator receiver%3B regulatory protein LuxR%3B Sigma-70 region 4 type 2~SMART: response regulator receiver%3B regulatory protein LuxR~KEGG: bcy:Bcer98_0214 two component LuxR family transcriptional regulator gene gene1952 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1910 Amir_1911 Amir_1911 Amir_1911 2119273 2119698 + putative signal transduction protein with CBS domains PFAM: CBS domain containing protein~SMART: CBS domain containing protein~KEGG: pau:PA14_40540 CBS domain-containing protein gene gene1953 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1911 Amir_1912 Amir_1912 Amir_1912 2119914 2120381 + UspA domain protein PFAM: UspA domain protein~KEGG: hha:Hhal_2190 UspA domain protein gene gene1954 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1912 Amir_1913 Amir_1913 Amir_1913 2120378 2122936 + CoA-binding domain protein PFAM: CoA-binding domain protein%3B GCN5-related N- acetyltransferase~KEGG: mgm:Mmc1_1098 CoA-binding domain protein gene gene1955 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1913 Amir_1914 Amir_1914 Amir_1914 2122933 2123304 + UspA domain-containing protein KEGG: aeh:Mlg_0315 UspA domain-containing protein gene gene1956 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1914 Amir_1915 Amir_1915 Amir_1915 2123369 2123767 + hypothetical protein KEGG: bbt:BBta_6725 hypothetical protein gene gene1957 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1915 Amir_1916 Amir_1916 Amir_1916 2123894 2124190 - hypothetical protein gene gene1958 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1916 Amir_1917 Amir_1917 Amir_1917 2124401 2125387 - nitroreductase PFAM: nitroreductase~KEGG: rce:RC1_3281 hypothetical protein gene gene1959 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1917 Amir_1918 Amir_1918 Amir_1918 2125566 2127935 + Phosphoketolase PFAM: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase~KEGG: bja:bll2518 putative phosphoketolase gene gene1960 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1918 Amir_1919 Amir_1919 Amir_1919 2127935 2129020 + acetate kinase TIGRFAM: acetate kinase~PFAM: acetate and butyrate kinase~KEGG: nwi:Nwi_1948 acetate kinase gene gene1961 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1919 Amir_1920 Amir_1920 Amir_1920 2129898 2130914 + serine/threonine protein kinase PFAM: Serine/threonine protein kinase-related%3B tyrosine protein kinase~SMART: serine/threonine protein kinase%3B tyrosine protein kinase~KEGG: scl:sce5315 protein kinase gene gene1962 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1920 Amir_1921 Amir_1921 Amir_1921 2131354 2131851 + hypothetical protein gene gene1963 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1921 Amir_1922 Amir_1922 Amir_1922 2132284 2134341 + acyltransferase 3 PFAM: acyltransferase 3~KEGG: mes:Meso_0485 acyltransferase 3 gene gene1964 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1922 Amir_1923 Amir_1923 Amir_1923 2134527 2135327 + glycosyl transferase family 2 PFAM: glycosyl transferase family 2~KEGG: ppd:Ppro_2693 glycosyl transferase family protein gene gene1965 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1923 Amir_1924 Amir_1924 Amir_1924 2135399 2137411 + glycosyl transferase family 39 PFAM: glycosyl transferase family 39~KEGG: bsu:BSU40490 hypothetical protein gene gene1966 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1924 Amir_1925 Amir_1925 Amir_1925 2137527 2138777 + hypothetical protein gene gene1967 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1925 Amir_1926 Amir_1926 Amir_1926 2138797 2139831 - transcriptional regulator%2C LacI family KEGG: pen:PSEEN1955 ribose operon repressor RbsR~PFAM: periplasmic binding protein/LacI transcriptional regulator%3B regulatory protein LacI~SMART: regulatory protein LacI gene gene1968 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1926 Amir_1927 Amir_1927 Amir_1927 2140041 2141360 + extracellular solute-binding protein family 1 PFAM: extracellular solute-binding protein family 1~KEGG: sugar ABC transporter%3B K10188 lactose/L- arabinose transport system substrate-binding protein gene gene1969 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1927 Amir_1928 Amir_1928 Amir_1928 2141357 2142253 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: sugar ABC transporter%3B K10189 lactose/L- arabinose transport system permease protein gene gene1970 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1928 Amir_1929 Amir_1929 Amir_1929 2142250 2143092 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: sml:Smlt3250 putative sugar transporter%2C permease protein gene gene1971 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1929 Amir_1930 Amir_1930 Amir_1930 2143103 2144605 + Alpha-N-arabinofuranosidase PFAM: alpha-L-arabinofuranosidase domain protein~KEGG: vei:Veis_3457 alpha-N-arabinofuranosidase gene gene1972 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1930 Amir_1931 Amir_1931 Amir_1931 2145028 2145930 - NAD-dependent epimerase/dehydratase PFAM: NAD-dependent epimerase/dehydratase%3B NmrA family protein%3B dTDP-4-dehydrorhamnose reductase%3B 3-beta hydroxysteroid dehydrogenase/isomerase%3B Male sterility domain~KEGG: glo:Glov_0487 NAD-dependent epimerase/dehydratase gene gene1973 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1931 Amir_1932 Amir_1932 Amir_1932 2146023 2146454 - cyclase/dehydrase PFAM: cyclase/dehydrase gene gene1974 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1932 Amir_1933 Amir_1933 Amir_1933 2146634 2147359 - two component transcriptional regulator%2C winged helix family PFAM: response regulator receiver%3B transcriptional regulator domain protein~SMART: response regulator receiver~KEGG: bcb:BCB4264_A5589 DNA-binding response regulator YycF gene gene1975 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1933 Amir_1934 Amir_1934 Amir_1934 2147431 2148255 + UspA domain protein PFAM: UspA domain protein~KEGG: afw:Anae109_3830 universal stress family protein gene gene1976 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1934 Amir_1935 Amir_1935 Amir_1935 2148302 2148736 + UspA domain protein PFAM: UspA domain protein~KEGG: hha:Hhal_2190 UspA domain protein gene gene1977 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1935 Amir_1936 Amir_1936 Amir_1936 2148805 2149110 - hypothetical protein gene gene1978 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1936 Amir_1937 Amir_1937 Amir_1937 2149252 2149857 - two component transcriptional regulator%2C LuxR family PFAM: response regulator receiver%3B regulatory protein LuxR%3B Bacterio-opsin activator HTH domain protein~SMART: response regulator receiver%3B regulatory protein LuxR~KEGG: xcv:XCV4086 LuxR family two-component response regulator gene gene1979 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1937 Amir_1938 Amir_1938 Amir_1938 2149854 2150945 - histidine kinase PFAM: histidine kinase dimerization and phosphoacceptor region%3B ATP-binding region ATPase domain protein~KEGG: ccs:CCNA_01207 two-component sensor histidine kinase gene gene1980 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1938 Amir_1939 Amir_1939 Amir_1939 2150955 2151683 - ABC-2 type transporter PFAM: ABC-2 type transporter~KEGG: bca:BCE_5484 ABC transporter%2C permease protein%2C putative gene gene1981 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1939 Amir_1940 Amir_1940 Amir_1940 2151683 2152603 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ccs:CCNA_01205 ABC transporter ATP-binding protein gene gene1982 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1940 Amir_1941 Amir_1941 Amir_1941 2152700 2153098 + conserved hypothetical protein KEGG: scl:sce6219 hypothetical protein gene gene1983 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1941 Amir_1942 Amir_1942 Amir_1942 2153098 2153559 + hypothetical protein gene gene1984 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1942 Amir_1943 Amir_1943 Amir_1943 2153564 2153731 - protein of unknown function DUF397 PFAM: protein of unknown function DUF397 gene gene1985 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1943 Amir_1944 Amir_1944 Amir_1944 2153728 2154567 - transcriptional regulator%2C XRE family PFAM: helix-turn-helix domain protein~SMART: helix-turn-helix domain protein~KEGG: cko:CKO_01491 hypothetical protein gene gene1986 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1944 Amir_1945 Amir_1945 Amir_1945 2154739 2155200 + chromosome segregation protein SMC%3B K03529 chromosome segregation protein KEGG: chromosome segregation protein SMC%3B K03529 chromosome segregation protein gene gene1987 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1945 Amir_1946 Amir_1946 Amir_1946 2155252 2156100 + spermidine synthase-like protein KEGG: bpt:Bpet3209 spermidine synthase (putrescine aminopropyltransferase) gene gene1988 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1946 Amir_1947 Amir_1947 Amir_1947 2156270 2156977 - hypothetical protein KEGG: hypothetical protein gene gene1989 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1947 Amir_1948 Amir_1948 Amir_1948 2157127 2158161 - ABC transporter related PFAM: ABC transporter related%3B TOBE domain protein~SMART: AAA ATPase~KEGG: bac:BamMC406_1610 ABC transporter related gene gene1990 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1948 Amir_1949 Amir_1949 Amir_1949 2158158 2158937 - molybdate ABC transporter%2C inner membrane subunit TIGRFAM: molybdate ABC transporter%2C inner membrane subunit%3B NifC-like ABC-type porter~PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: scl:sce1134 ABC-type molybdate transporter%2C permease protein gene gene1991 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1949 Amir_1950 Amir_1950 Amir_1950 2158934 2159728 - molybdenum ABC transporter%2C periplasmic molybdate-binding protein TIGRFAM: molybdenum ABC transporter%2C periplasmic molybdate-binding protein~PFAM: extracellular solute-binding protein family 1~KEGG: scl:sce1135 ABC-type molybdate transporter%2C substrate-binding protein gene gene1992 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1950 Amir_1951 Amir_1951 Amir_1951 2159734 2160132 - DNA binding domain protein%2C excisionase family TIGRFAM: DNA binding domain protein%2C excisionase family~PFAM: TOBE domain protein%3B regulatory protein MerR~KEGG: aba:Acid345_1548 molybdenum-pterin binding protein gene gene1993 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1951 Amir_1952 Amir_1952 Amir_1952 2160337 2161062 - regulatory protein TetR PFAM: regulatory protein TetR%3B Tetracyclin repressor domain protein~KEGG: pst:PSPTO_2646 TetR family transcriptional regulator gene gene1994 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1952 Amir_1953 Amir_1953 Amir_1953 2161152 2162630 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: smt:Smal_2153 major facilitator superfamily MFS_1 gene gene1995 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1953 Amir_1954 Amir_1954 Amir_1954 2162777 2164489 - LPXTG-motif cell wall anchor domain protein TIGRFAM: LPXTG-motif cell wall anchor domain protein~KEGG: hypothetical protein gene gene1996 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1954 Amir_1955 Amir_1955 Amir_1955 2164726 2167434 + Osmosensitive K channel His kinase sensor PFAM: Osmosensitive K channel His kinase sensor%3B ATP-binding region ATPase domain protein%3B UspA domain protein%3B histidine kinase A domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein~KEGG: mrd:Mrad2831_0205 osmosensitive K+ channel signal transduction histidine kinase gene gene1997 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1955 Amir_1956 Amir_1956 Amir_1956 2167526 2167864 + hypothetical protein KEGG: hypothetical protein gene gene1998 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1956 Amir_1957 Amir_1957 Amir_1957 2168094 2169128 - methyl-accepting chemotaxis sensory transducer PFAM: PAS fold-3 domain protein%3B chemotaxis sensory transducer~SMART: chemotaxis sensory transducer%3B PAC repeat- containing protein~KEGG: psp:PSPPH_4230 methyl-accepting chemotaxis protein gene gene1999 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1957 Amir_1958 Amir_1958 Amir_1958 2169431 2169775 + hypothetical protein KEGG: rso:RS05496 putative oxidoreductase protein gene gene2000 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1958 Amir_1959 Amir_1959 Amir_1959 2169772 2170413 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: acr:Acry_0512 TetR family transcriptional regulator gene gene2001 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1959 Amir_1960 Amir_1960 Amir_1960 2170502 2170702 - protein of unknown function DUF1271 PFAM: protein of unknown function DUF1271~KEGG: bpy:Bphyt_4246 hypothetical protein gene gene2002 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1960 Amir_1961 Amir_1961 Amir_1961 2170914 2172113 - cytochrome P450 PFAM: cytochrome P450~KEGG: bxe:Bxe_C0945 putative cytochrome P450 gene gene2003 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1961 Amir_1962 Amir_1962 Amir_1962 2172443 2173321 + Silent information regulator protein Sir2 PFAM: Silent information regulator protein Sir2~KEGG: scl:sce3874 hypothetical protein gene gene2004 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1962 Amir_1963 Amir_1963 Amir_1963 2173465 2173767 + hypothetical protein gene gene2005 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1963 Amir_1964 Amir_1964 Amir_1964 2173760 2175085 + hypothetical protein KEGG: mxa:MXAN_5876 hypothetical protein gene gene2006 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1964 Amir_1965 Amir_1965 Amir_1965 2175082 2175981 + hypothetical protein gene gene2007 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1965 Amir_1966 Amir_1966 Amir_1966 2176506 2176961 + transcriptional regulator%2C MarR family PFAM: regulatory protein MarR~SMART: regulatory protein MarR~KEGG: bra:BRADO0101 organic hydroperoxide resistance transcriptional regulator gene gene2008 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1966 Amir_1967 Amir_1967 Amir_1967 2176958 2177356 + hypothetical protein gene gene2009 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1967 Amir_1968 Amir_1968 Amir_1968 2177364 2178581 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: jan:Jann_0419 major facilitator transporter gene gene2010 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1968 Amir_1969 Amir_1969 Amir_1969 2178843 2179700 - Triacylglycerol lipase KEGG: pmy:Pmen_4204 hypothetical protein gene gene2011 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1969 Amir_1970 Amir_1970 Amir_1970 2180087 2182594 + transcriptional regulator%2C LuxR family PFAM: regulatory protein LuxR~SMART: regulatory protein LuxR~KEGG: acp:A2cp1_3940 TPR repeat-containing protein gene gene2012 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1970 Amir_1971 Amir_1971 Amir_1971 2183048 2184484 + alpha-L-arabinofuranosidase B PFAM: alpha-L-arabinofuranosidase B%3B Glycosyl hydrolase family 32 domain protein~KEGG: scl:sce1247 hypothetical protein gene gene2013 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1971 Amir_1972 Amir_1972 Amir_1972 2184597 2185208 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: aha:AHA_0553 TetR family transcriptional regulator gene gene2014 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1972 Amir_1973 Amir_1973 Amir_1973 2185208 2186122 - Saccharopine dehydrogenase PFAM: Saccharopine dehydrogenase~KEGG: bha:BH3388 hypothetical protein gene gene2015 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1973 Amir_1974 Amir_1974 Amir_1974 2186122 2186904 - Methyltransferase type 11 PFAM: Methyltransferase type 11%3B Methyltransferase type 12~KEGG: bja:bll4939 methyltransferase gene gene2016 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1974 Amir_1975 Amir_1975 Amir_1975 2187099 2189051 + Alpha-glucuronidase PFAM: Glycosyl hydrolase 67 middle domain protein%3B glycosyl hydrolase 67 C-teriminal domain protein~KEGG: bha:BH1061 alpha-glucuronidase gene gene2017 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1975 Amir_1976 Amir_1976 Amir_1976 2189301 2191340 - Beta-galactosidase PFAM: Glycoside hydrolase family 42 domain protein%3B Beta-galactosidase trimerisation domain protein%3B Beta-galactosidase domain protein~KEGG: bha:BH3701 beta-galactosidase gene gene2018 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1976 Amir_1977 Amir_1977 Amir_1977 2191337 2192023 - glycosyltransferase 36 KEGG: afw:Anae109_4026 glycosyltransferase 36 gene gene2019 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1977 Amir_1978 Amir_1978 Amir_1978 2192020 2193558 - Xylan 1%2C4-beta-xylosidase PFAM: glycoside hydrolase family 39~KEGG: bha:BH1068 beta-xylosidase gene gene2020 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1978 Amir_1979 Amir_1979 Amir_1979 2193564 2195192 - extracellular solute-binding protein family 1 PFAM: extracellular solute-binding protein family 1~KEGG: atc:AGR_L_3560 AlgQ1%2C putative multiple sugar transport system substrate-binding protein gene gene2021 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1979 Amir_1980 Amir_1980 Amir_1980 2195239 2196180 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: bsu:BSU07120 transmembrane lipoprotein gene gene2022 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1980 Amir_1981 Amir_1981 Amir_1981 2196177 2197175 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: atc:AGR_L_3564 AlgM1%2C putative multiple sugar transport system permease protein gene gene2023 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1981 Amir_1982 Amir_1982 Amir_1982 2197172 2199595 - glycoside hydrolase family 3 domain protein PFAM: glycoside hydrolase family 3 domain protein~KEGG: vei:Veis_0942 glycoside hydrolase%2C family 3 domain protein gene gene2024 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1982 Amir_1983 Amir_1983 Amir_1983 2199848 2200885 + transcriptional regulator%2C LacI family KEGG: rpi:Rpic_0879 transcriptional regulator%2C LacI family~PFAM: periplasmic binding protein/LacI transcriptional regulator%3B regulatory protein LacI~SMART: regulatory protein LacI gene gene2025 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1983 Amir_1984 Amir_1984 Amir_1984 2201044 2202027 + Acetyl xylan esterase PFAM: Acetyl xylan esterase~KEGG: mlo:mlr6993 acetyl xylan esterase gene gene2026 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1984 Amir_1985 Amir_1985 Amir_1985 2202055 2202744 - Clp domain protein PFAM: Clp domain protein~KEGG: ATP-dependent clp protease ATP-binding subunit gene gene2027 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1985 Amir_1986 Amir_1986 Amir_1986 2202807 2203169 - conserved hypothetical protein KEGG: ank:AnaeK_3385 hypothetical protein gene gene2028 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1986 Amir_1987 Amir_1987 Amir_1987 2203266 2204171 + hypothetical protein KEGG: scl:sce0848 protein kinase gene gene2029 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1987 Amir_1988 Amir_1988 Amir_1988 2204210 2204755 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: transcriptional regulator protein gene gene2030 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1988 Amir_1989 Amir_1989 Amir_1989 2205035 2205478 + hypothetical protein gene gene2031 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1989 Amir_1990 Amir_1990 Amir_1990 2205495 2206226 + aminoglycoside phosphotransferase PFAM: aminoglycoside phosphotransferase~KEGG: sme:SMc02722 putative aminoglycoside 3'- phosphotransferase protein gene gene2032 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1990 Amir_1991 Amir_1991 Amir_1991 2206319 2206978 + Haloacid dehalogenase domain protein hydrolase PFAM: Haloacid dehalogenase domain protein hydrolase~KEGG: hypothetical protein gene gene2033 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1991 Amir_1992 Amir_1992 Amir_1992 2207022 2207612 - hypothetical protein KEGG: hypothetical protein gene gene2034 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1992 Amir_1993 Amir_1993 Amir_1993 2207609 2208022 - protein of unknown function DUF1469 PFAM: protein of unknown function DUF1469~KEGG: gbm:Gbem_1384 protein of unknown function DUF1469 gene gene2035 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1993 Amir_1994 Amir_1994 Amir_1994 2208120 2209040 + ribonuclease BN TIGRFAM: ribonuclease BN~PFAM: ribonuclease BN~KEGG: pfo:Pfl01_4350 ribonuclease BN gene gene2036 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1994 Amir_1995 Amir_1995 Amir_1995 2209081 2210115 - Alcohol dehydrogenase GroES domain protein PFAM: Alcohol dehydrogenase GroES domain protein~KEGG: scl:sce5062 hypothetical protein gene gene2037 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1995 Amir_1996 Amir_1996 Amir_1996 2210124 2211428 - aminotransferase class-III PFAM: aminotransferase class-III~KEGG: sat:SYN_01215 4-aminobutyrate aminotransferase gene gene2038 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1996 Amir_1997 Amir_1997 Amir_1997 2211428 2212984 - glycosyl transferase family 20 PFAM: glycosyl transferase family 20~KEGG: ank:AnaeK_0483 HAD-superfamily hydrolase%2C subfamily IIB gene gene2039 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1997 Amir_1998 Amir_1998 Amir_1998 2213059 2213967 - dTDP-4-dehydrorhamnose reductase PFAM: dTDP-4-dehydrorhamnose reductase%3B NAD- dependent epimerase/dehydratase~KEGG: acp:A2cp1_4446 dTDP-4-dehydrorhamnose reductase gene gene2040 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1998 Amir_1999 Amir_1999 Amir_1999 2214258 2215532 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: major facilitator superfamily MFS_1 precursor gene gene2041 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_1999 Amir_2000 Amir_2000 Amir_2000 2215644 2216792 + 3-dehydroquinate synthase PFAM: 3-dehydroquinate synthase~KEGG: reh:H16_A3434 3-dehydroquinate synthase gene gene2042 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2000 Amir_2001 Amir_2001 Amir_2001 2216789 2218768 + Xylose isomerase domain protein TIM barrel PFAM: Xylose isomerase domain protein TIM barrel%3B ATPase BadF/BadG/BcrA/BcrD type~KEGG: vei:Veis_3268 xylose isomerase domain protein TIM barrel gene gene2043 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2001 Amir_2002 Amir_2002 Amir_2002 2218765 2219871 + Nucleotidyl transferase PFAM: Nucleotidyl transferase~KEGG: cja:CJA_3254 glucose-1-phosphate adenylyltransferase gene gene2044 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2002 Amir_2003 Amir_2003 Amir_2003 2219970 2220392 + Glyoxalase/bleomycin resistance protein/dioxygenase PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase%3B 3-demethylubiquinone-9 3- methyltransferase~KEGG: lch:Lcho_1958 glyoxalase/bleomycin resistance protein/dioxygenase gene gene2045 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2003 Amir_2004 Amir_2004 Amir_2004 2220429 2221010 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: rle:RL2982 TetR family transcriptional regulator gene gene2046 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2004 Amir_2005 Amir_2005 Amir_2005 2221163 2222728 - malate synthase A KEGG: rce:RC1_2688 malate synthase A~TIGRFAM: malate synthase A~PFAM: malate synthase gene gene2047 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2005 Amir_2006 Amir_2006 Amir_2006 2222764 2224032 - isocitrate lyase TIGRFAM: isocitrate lyase~PFAM: isocitrate lyase and phosphorylmutase~KEGG: sml:Smlt0232 putative isocitrate lyase gene gene2048 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2006 Amir_2007 Amir_2007 Amir_2007 2224237 2225652 + transcriptional regulator%2C XRE family PFAM: protein of unknown function DUF955%3B helix- turn-helix domain protein~SMART: helix-turn-helix domain protein~KEGG: rpt:Rpal_2644 transcriptional regulator%2C XRE family gene gene2049 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2007 Amir_2008 Amir_2008 Amir_2008 2225671 2226882 - conserved hypothetical protein KEGG: rec:RHECIAT_PC0000040 hypothetical protein gene gene2050 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2008 Amir_2009 Amir_2009 Amir_2009 2227176 2228363 + histidine kinase PFAM: histidine kinase dimerization and phosphoacceptor region%3B ATP-binding region ATPase domain protein~KEGG: scl:sce5432 putative two-component system sensor kinase gene gene2051 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2009 Amir_2010 Amir_2010 Amir_2010 2228376 2229020 + two component transcriptional regulator%2C LuxR family PFAM: response regulator receiver%3B regulatory protein LuxR%3B Sigma-70 region 4 type 2~SMART: response regulator receiver%3B regulatory protein LuxR~KEGG: scl:sce5431 two-component system response regulator gene gene2052 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2010 Amir_2011 Amir_2011 Amir_2011 2229169 2230050 + hypothetical protein KEGG: sfu:Sfum_3154 hypothetical protein gene gene2053 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2011 Amir_2012 Amir_2012 Amir_2012 2230171 2231715 + peptidase S8 and S53 subtilisin kexin sedolisin PFAM: peptidase S8 and S53 subtilisin kexin sedolisin%3B proteinase inhibitor I9 subtilisin propeptide~KEGG: mca:MCA0875 serine protease gene gene2054 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2012 Amir_2013 Amir_2013 Amir_2013 2232011 2233438 + monooxygenase FAD-binding PFAM: monooxygenase FAD-binding~KEGG: scl:sce4973 putative monooxygenase gene gene2055 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2013 Amir_2014 Amir_2014 Amir_2014 2233468 2233887 - hypothetical protein gene gene2056 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2014 Amir_2015 Amir_2015 Amir_2015 2234529 2234954 - sporulation and cell division protein SsgA PFAM: sporulation and cell division protein SsgA gene gene2060 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2015 Amir_2016 Amir_2016 Amir_2016 2235175 2235852 + RNA polymerase%2C sigma-24 subunit%2C ECF subfamily TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family~PFAM: sigma-70 region 2 domain protein%3B Sigma-70 region 4 type 2%3B sigma-70 region 4 domain protein~KEGG: rpi:Rpic_2575 RNA polymerase%2C sigma-24 subunit%2C ECF subfamily gene gene2061 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2016 Amir_2017 Amir_2017 Amir_2017 2235849 2236652 + hypothetical protein KEGG: GH10507 gene product from transcript GH10507- RA gene gene2062 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2017 Amir_2018 Amir_2018 Amir_2018 2236667 2237086 + hypothetical protein KEGG: swp:swp_2864 hypothetical protein swp_2864 gene gene2063 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2018 Amir_2019 Amir_2019 Amir_2019 2237286 2237989 - pseudogene gene2065 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2019 Amir_2020 Amir_2020 Amir_2020 2237988 2239670 - hypothetical protein KEGG: bvi:Bcep1808_7197 integrase catalytic subunit gene gene2066 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2020 Amir_2021 Amir_2021 Amir_2021 2240627 2241712 + Scyllo-inosamine-4-phosphate amidinotransferase KEGG: bid:Bind_1964 non-specific serine/threonine protein kinase gene gene2067 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2021 Amir_2022 Amir_2022 Amir_2022 2241790 2243067 + diaminobutyrate/2-oxoglutarate aminotransferase TIGRFAM: diaminobutyrate/2-oxoglutarate aminotransferase%3B 2%2C4-diaminobutyrate 4-transaminase~PFAM: aminotransferase class-III~KEGG: sal:Sala_2950 diaminobutyrate--2-oxoglutarate aminotransferase gene gene2068 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2022 Amir_2023 Amir_2023 Amir_2023 2243138 2243785 + hypothetical protein KEGG: rec:RHECIAT_PB0000363 hypothetical protein gene gene2069 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2023 Amir_2024 Amir_2024 Amir_2024 2243782 2244681 + tryptophan 23-dioxygenase PFAM: tryptophan 23-dioxygenase~KEGG: cak:Caul_5244 tryptophan 23-dioxygenase gene gene2070 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2024 Amir_2025 Amir_2025 Amir_2025 2244678 2245934 + aminotransferase class V PFAM: aminotransferase class V~KEGG: swi:Swit_0679 kynureninase gene gene2071 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2025 Amir_2026 Amir_2026 Amir_2026 2245939 2247210 + ATP-dependent carboxylate-amine ligase domain protein ATP-grasp PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp~KEGG: bpd:BURPS668_0791 biotin carboxylase gene gene2072 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2026 Amir_2027 Amir_2027 Amir_2027 2247241 2248551 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1%3B protein of unknown function DUF894 DitE~KEGG: rpc:RPC_4715 major facilitator transporter gene gene2073 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2027 Amir_2028 Amir_2028 Amir_2028 2248548 2249507 + extracellular solute-binding protein family 3 PFAM: extracellular solute-binding protein family 3~SMART: extracellular solute-binding protein family 3~KEGG: bmb:BruAb2_0285 amino acid ABC transporter%2C periplasmic amino acid-binding protein gene gene2074 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2028 Amir_2029 Amir_2029 Amir_2029 2249565 2250950 + amino acid permease-associated region PFAM: amino acid permease-associated region~KEGG: bur:Bcep18194_C7638 amino acid transporter gene gene2075 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2029 Amir_2030 Amir_2030 Amir_2030 2251035 2251259 + hypothetical protein gene gene2076 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2030 Amir_2031 Amir_2031 Amir_2031 2251483 2252985 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: scl:sce7656 carbohydrate ABC transporter gene gene2077 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2031 Amir_2032 Amir_2032 Amir_2032 2252985 2253323 + peptidase S24 and S26 domain protein PFAM: peptidase S24 and S26 domain protein~KEGG: dal:Dalk_4340 signal peptidase I gene gene2078 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2032 Amir_2033 Amir_2033 Amir_2033 2253269 2253634 - putative addiction module antidote protein SMART: helix-turn-helix domain protein gene gene2079 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2033 Amir_2034 Amir_2034 Amir_2034 2253976 2254980 - Integral membrane protein TerC PFAM: Integral membrane protein TerC~KEGG: ade:Adeh_2303 integral membrane protein TerC gene gene2080 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2034 Amir_2035 Amir_2035 Amir_2035 2255208 2255552 + pseudogene gene2081 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2035 Amir_2036 Amir_2036 Amir_2036 2255481 2256647 - monooxygenase FAD-binding PFAM: monooxygenase FAD-binding%3B FAD dependent oxidoreductase~KEGG: mex:Mext_0724 monooxygenase FAD-binding gene gene2082 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2036 Amir_2037 Amir_2037 Amir_2037 2256789 2257490 - respiratory nitrate reductase%2C gamma subunit KEGG: bcb:BCB4264_A2138 respiratory nitrate reductase%2C gamma subunit~TIGRFAM: respiratory nitrate reductase%2C gamma subunit~PFAM: Nitrate reductase gamma subunit gene gene2083 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2037 Amir_2038 Amir_2038 Amir_2038 2257487 2258110 - nitrate reductase molybdenum cofactor assembly chaperone TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone~PFAM: Nitrate reductase delta subunit~KEGG: bsu:BSU37260 nitrate reductase (protein J) gene gene2084 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2038 Amir_2039 Amir_2039 Amir_2039 2258107 2259642 - nitrate reductase%2C beta subunit TIGRFAM: nitrate reductase%2C beta subunit~KEGG: bsu:BSU37270 nitrate reductase (beta subunit) gene gene2085 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2039 Amir_2040 Amir_2040 Amir_2040 2259642 2263310 - nitrate reductase%2C alpha subunit KEGG: bcb:BCB4264_A2135 respiratory nitrate reductase%2C alpha subunit~TIGRFAM: nitrate reductase%2C alpha subunit~PFAM: molybdopterin oxidoreductase%3B molybdopterin oxidoreductase Fe4S4 region%3B molydopterin dinucleotide- binding region gene gene2086 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2040 Amir_2041 Amir_2041 Amir_2041 2263420 2264613 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: sus:Acid_2929 major facilitator transporter gene gene2087 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2041 Amir_2042 Amir_2042 Amir_2042 2264785 2265213 - hypothetical protein KEGG: bcm:Bcenmc03_1697 hypothetical protein gene gene2088 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2042 Amir_2043 Amir_2043 Amir_2043 2265267 2265959 - hypothetical protein gene gene2089 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2043 Amir_2044 Amir_2044 Amir_2044 2266002 2266223 - hypothetical protein gene gene2090 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2044 Amir_2045 Amir_2045 Amir_2045 2266370 2266543 + hypothetical protein gene gene2091 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2045 Amir_2046 Amir_2046 Amir_2046 2266727 2268172 + argininosuccinate synthase KEGG: lch:Lcho_0912 argininosuccinate synthase~TIGRFAM: argininosuccinate synthase~PFAM: argininosuccinate synthase gene gene2092 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2046 Amir_2047 Amir_2047 Amir_2047 2268249 2270828 - alpha-L-rhamnosidase PFAM: alpha-L-rhamnosidase%3B alpha-L-rhamnosidase domain protein~KEGG: hypothetical protein gene gene2093 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2047 Amir_2048 Amir_2048 Amir_2048 2271015 2273054 - cellulose-binding family II PFAM: cellulose-binding family II%3B Fibronectin type III domain protein~SMART: cellulose-binding family II%3B Fibronectin type III domain protein~KEGG: cak:Caul_2415 alpha-N-arabinofuranosidase gene gene2094 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2048 Amir_2049 Amir_2049 Amir_2049 2273320 2274330 - Substrate-binding region of ABC-type glycine betaine transport system PFAM: Substrate-binding region of ABC-type glycine betaine transport system~KEGG: pst:PSPTO_4577 glycine betaine/choline OpuC ABC transporter%2C periplasmic substrate-binding protein gene gene2095 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2049 Amir_2050 Amir_2050 Amir_2050 2274327 2275103 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: bsu:BSU33720 choline ABC transporter membrane protein gene gene2096 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2050 Amir_2051 Amir_2051 Amir_2051 2275100 2276212 - glycine betaine/L-proline ABC transporter%2C ATPase subunit KEGG: pol:Bpro_1154 glycine betaine/L-proline transport ATP binding subunit~TIGRFAM: glycine betaine/L-proline ABC transporter%2C ATPase subunit~PFAM: ABC transporter related~SMART: AAA ATPase gene gene2097 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2051 Amir_2052 Amir_2052 Amir_2052 2276202 2276852 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: sme:SMa1467 inner-membrane permease gene gene2098 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2052 Amir_2053 Amir_2053 Amir_2053 2277242 2277880 - hypothetical protein KEGG: gsu:GSU0139 hypothetical protein gene gene2099 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2053 Amir_2054 Amir_2054 Amir_2054 2278287 2279423 + extracellular solute-binding protein KEGG: acr:Acry_0984 extracellular solute-binding protein gene gene2100 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2054 Amir_2055 Amir_2055 Amir_2055 2279427 2280338 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: acr:Acry_0983 binding-protein-dependent transport systems inner membrane component gene gene2101 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2055 Amir_2056 Amir_2056 Amir_2056 2280329 2281144 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: cvi:CV_1679 ABC transporter permease gene gene2102 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2056 Amir_2057 Amir_2057 Amir_2057 2281146 2282231 + ABC transporter related PFAM: ABC transporter related%3B Transport-associated OB domain protein~SMART: AAA ATPase~KEGG: acr:Acry_0981 ABC transporter related gene gene2103 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2057 Amir_2058 Amir_2058 Amir_2058 2282315 2283757 - putative secreted protein KEGG: sus:Acid_3131 putative secreted protein gene gene2104 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2058 Amir_2059 Amir_2059 Amir_2059 2283961 2284587 + protein of unknown function DUF305 PFAM: protein of unknown function DUF305~KEGG: eli:ELI_14360 putative secreted protein gene gene2105 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2059 Amir_2060 Amir_2060 Amir_2060 2284777 2285037 - hypothetical protein gene gene2106 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2060 Amir_2061 Amir_2061 Amir_2061 2285251 2285727 - CMP/dCMP deaminase zinc-binding PFAM: CMP/dCMP deaminase zinc-binding~KEGG: sus:Acid_2535 guanine deaminase gene gene2107 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2061 Amir_2062 Amir_2062 Amir_2062 2285820 2286116 - hydroxyisourate hydrolase TIGRFAM: hydroxyisourate hydrolase~PFAM: Transthyretin~KEGG: hypothetical protein gene gene2108 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2062 Amir_2063 Amir_2063 Amir_2063 2286271 2287956 + transcriptional regulator%2C PucR family PFAM: purine catabolism PurC domain protein~KEGG: GK24882 gene product from transcript GK24882- RA gene gene2109 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2063 Amir_2064 Amir_2064 Amir_2064 2288071 2289039 + superoxide dismutase KEGG: aav:Aave_4523 superoxide dismutase gene gene2110 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2064 Amir_2065 Amir_2065 Amir_2065 2289064 2289165 + hypothetical protein gene gene2111 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2065 Amir_2066 Amir_2066 Amir_2066 2289272 2291728 + ATP-binding region ATPase domain protein PFAM: ATP-binding region ATPase domain protein~SMART: ATP-binding region ATPase domain protein~KEGG: lch:Lcho_0275 histidine kinase gene gene2112 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2066 Amir_2067 Amir_2067 Amir_2067 2291773 2292201 + Roadblock/LC7 family protein PFAM: Roadblock/LC7 family protein~KEGG: pna:Pnap_2813 roadblock/LC7 family protein gene gene2113 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2067 Amir_2068 Amir_2068 Amir_2068 2292198 2292566 + protein of unknown function DUF742 PFAM: protein of unknown function DUF742 gene gene2114 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2068 Amir_2069 Amir_2069 Amir_2069 2292547 2293140 + protein of unknown function ATP binding PFAM: protein of unknown function ATP binding~KEGG: dac:Daci_0776 protein of unknown function ATP binding gene gene2115 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2069 Amir_2070 Amir_2070 Amir_2070 2293141 2294439 - Flavin-containing monooxygenase PFAM: flavin-containing monooxygenase FMO%3B FAD- dependent pyridine nucleotide-disulphide oxidoreductase~KEGG: pla:Plav_0443 flavin-containing monooxygenase gene gene2116 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2070 Amir_2071 Amir_2071 Amir_2071 2294631 2295752 + conserved hypothetical protein KEGG: met:M446_0097 hypothetical protein gene gene2117 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2071 Amir_2072 Amir_2072 Amir_2072 2295899 2296483 + protein of unknown function UPF0157 PFAM: protein of unknown function UPF0157~KEGG: mxa:MXAN_5238 hypothetical protein gene gene2118 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2072 Amir_2073 Amir_2073 Amir_2073 2296533 2297393 - 3-hydroxybutyryl-CoA dehydrogenase PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding%3B 3-hydroxyacyl-CoA dehydrogenase domain protein~KEGG: gbm:Gbem_1461 3-hydroxyacyl-CoA dehydrogenase NAD-binding gene gene2119 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2073 Amir_2074 Amir_2074 Amir_2074 2297519 2298187 - SCP-like extracellular PFAM: SCP-like extracellular~KEGG: noc:Noc_1373 hypothetical protein gene gene2120 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2074 Amir_2075 Amir_2075 Amir_2075 2298286 2299701 - ethanolamine transproter TIGRFAM: ethanolamine transproter~PFAM: amino acid permease-associated region~KEGG: ppg:PputGB1_0589 ethanolamine transproter gene gene2121 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2075 Amir_2076 Amir_2076 Amir_2076 2299823 2301187 + Glutamate--ammonia ligase PFAM: glutamine synthetase catalytic region~KEGG: acr:Acry_2393 glutamine synthetase%2C catalytic region gene gene2122 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2076 Amir_2077 Amir_2077 Amir_2077 2301168 2301869 + peptidase C26 PFAM: peptidase C26%3B glutamine amidotransferase class-I~KEGG: rru:Rru_A0651 glutamine amidotransferase class-I gene gene2123 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2077 Amir_2078 Amir_2078 Amir_2078 2301866 2303224 + aldehyde dehydrogenase PFAM: Aldehyde Dehydrogenase~KEGG: swi:Swit_1745 aldehyde dehydrogenase (acceptor) gene gene2124 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2078 Amir_2079 Amir_2079 Amir_2079 2303283 2304050 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B KR domain protein%3B NAD-dependent epimerase/dehydratase~KEGG: hypothetical protein gene gene2125 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2079 Amir_2080 Amir_2080 Amir_2080 2304064 2304765 + GntR domain protein PFAM: GntR domain protein%3B regulatory protein GntR HTH%3B Helix-turn-helix type 11 domain protein~SMART: regulatory protein GntR HTH~KEGG: swi:Swit_1674 GntR family transcriptional regulator gene gene2126 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2080 Amir_2081 Amir_2081 Amir_2081 2304836 2305597 + hypothetical protein KEGG: bav:BAV1541 competence protein gene gene2127 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2081 Amir_2082 Amir_2082 Amir_2082 2305594 2306076 + hypothetical protein gene gene2128 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2082 Amir_2083 Amir_2083 Amir_2083 2306154 2306657 + response regulator receiver KEGG: ank:AnaeK_2798 response regulator receiver gene gene2129 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2083 Amir_2084 Amir_2084 Amir_2084 2306785 2307630 + hypothetical protein KEGG: saz:Sama_0820 putative lipoprotein gene gene2130 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2084 Amir_2085 Amir_2085 Amir_2085 2307658 2308614 + daunorubicin resistance ABC transporter ATPase subunit KEGG: acp:A2cp1_4055 daunorubicin resistance ABC transporter ATPase subunit~TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit~PFAM: ABC transporter related~SMART: AAA ATPase gene gene2131 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2085 Amir_2086 Amir_2086 Amir_2086 2308611 2309414 + ABC-2 type transporter PFAM: ABC-2 type transporter~KEGG: bcz:BCZK3149 ABC transporter efflux permease%3B daunorubicin resistance transmembrane protein gene gene2132 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2086 Amir_2087 Amir_2087 Amir_2087 2309460 2309666 - hypothetical protein gene gene2133 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2087 Amir_2088 Amir_2088 Amir_2088 2309884 2310174 + pseudogene gene2134 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2088 Amir_2089 Amir_2089 Amir_2089 2310424 2312472 + threonyl-tRNA synthetase TIGRFAM: threonyl-tRNA synthetase~PFAM: tRNA synthetase class II (G H P and S)%3B Anticodon-binding domain protein%3B Threonyl/alanyl tRNA synthetase SAD~KEGG: afr:AFE_2614 threonyl-tRNA synthetase gene gene2135 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2089 Amir_2090 Amir_2090 Amir_2090 2312469 2313017 + histidine triad (HIT) protein PFAM: histidine triad (HIT) protein~KEGG: pca:Pcar_1504 HIT (HINT%2C histidine triad) family protein gene gene2136 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2090 Amir_2091 Amir_2091 Amir_2091 2313814 2314575 + hypothetical protein gene gene2137 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2091 Amir_2092 Amir_2092 Amir_2092 2314637 2315284 + CDP-alcohol phosphatidyltransferase PFAM: CDP-alcohol phosphatidyltransferase~KEGG: noc:Noc_2982 CDP-alcohol phosphatidyltransferase gene gene2138 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2092 Amir_2093 Amir_2093 Amir_2093 2315281 2316213 + lipid A biosynthesis acyltransferase PFAM: lipid A biosynthesis acyltransferase~KEGG: gsu:GSU0243 hypothetical protein gene gene2139 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2093 Amir_2094 Amir_2094 Amir_2094 2316210 2317337 + Phosphatidylinositol alpha-mannosyltransferase PFAM: glycosyl transferase group 1~KEGG: acp:A2cp1_4300 phosphatidylinositol alpha- mannosyltransferase gene gene2140 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2094 Amir_2095 Amir_2095 Amir_2095 2317334 2318317 + NUDIX hydrolase PFAM: NUDIX hydrolase~KEGG: pzu:PHZ_c0948 mutator MutT protein gene gene2141 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2095 Amir_2096 Amir_2096 Amir_2096 2318395 2318772 - protein of unknown function DUF1696 PFAM: protein of unknown function DUF1696~KEGG: vpa:VPA1559 hypothetical protein gene gene2142 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2096 Amir_2097 Amir_2097 Amir_2097 2318920 2319465 - hypothetical protein gene gene2143 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2097 Amir_2098 Amir_2098 Amir_2098 2319462 2320454 - Luciferase-like monooxygenase PFAM: Luciferase-like monooxygenase~KEGG: pde:Pden_1120 luciferase family protein gene gene2144 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2098 Amir_2099 Amir_2099 Amir_2099 2320465 2321856 - dihydropyrimidinase KEGG: sus:Acid_7659 dihydropyrimidinase~TIGRFAM: dihydropyrimidinase~PFAM: amidohydrolase%3B Amidohydrolase 3 gene gene2145 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2099 Amir_2100 Amir_2100 Amir_2100 2321853 2322695 - Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase~KEGG: sus:Acid_7663 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase gene gene2146 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2100 Amir_2101 Amir_2101 Amir_2101 2322692 2324194 - NCS1 nucleoside transporter family TIGRFAM: NCS1 nucleoside transporter family~PFAM: permease for cytosine/purines uracil thiamine allantoin~KEGG: sus:Acid_7658 NCS1 nucleoside transporter gene gene2147 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2101 Amir_2102 Amir_2102 Amir_2102 2324545 2324808 + hypothetical protein gene gene2148 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2102 Amir_2103 Amir_2103 Amir_2103 2324805 2326415 - transcriptional regulator%2C PucR family PFAM: purine catabolism PurC domain protein~KEGG: pag:PLES_34081 putative regulatory protein gene gene2149 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2103 Amir_2104 Amir_2104 Amir_2104 2326533 2327825 + aminotransferase class-III PFAM: aminotransferase class-III~KEGG: sus:Acid_7662 aminotransferase gene gene2150 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2104 Amir_2105 Amir_2105 Amir_2105 2327822 2329363 + methylmalonate-semialdehyde dehydrogenase TIGRFAM: methylmalonate-semialdehyde dehydrogenase~PFAM: Aldehyde Dehydrogenase~KEGG: sus:Acid_0680 methylmalonate-semialdehyde dehydrogenase [acylating] gene gene2151 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2105 Amir_2106 Amir_2106 Amir_2106 2329561 2329875 + hypothetical protein gene gene2152 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2106 Amir_2107 Amir_2107 Amir_2107 2330391 2332616 - small GTP-binding protein TIGRFAM: small GTP-binding protein~PFAM: elongation factor G domain IV%3B protein synthesis factor GTP-binding%3B elongation factor G domain protein%3B elongation factor Tu domain 2 protein~KEGG: mpt:Mpe_A3402 elongation factor G gene gene2153 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2107 Amir_2108 Amir_2108 Amir_2108 2332890 2333858 + pyridoxine biosynthesis protein TIGRFAM: pyridoxine biosynthesis protein~PFAM: Vitamin B6 biosynthesis protein~KEGG: snz1%3B pyridoxine biosynthesis protein%3B K06215 pyridoxine biosynthesis protein gene gene2154 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2108 Amir_2109 Amir_2109 Amir_2109 2334894 2335508 + SNO glutamine amidotransferase PFAM: SNO glutamine amidotransferase%3B CobB/CobQ domain protein glutamine amidotransferase~KEGG: dds:Ddes_1897 SNO glutamine amidotransferase gene gene2155 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2109 Amir_2110 Amir_2110 Amir_2110 2335528 2336283 + protein of unknown function DUF28 PFAM: protein of unknown function DUF28~KEGG: gme:Gmet_0743 hypothetical protein gene gene2156 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2110 Amir_2111 Amir_2111 Amir_2111 2336341 2336868 + hypothetical protein KEGG: pna:Pnap_0373 hypothetical protein gene gene2157 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2111 Amir_2112 Amir_2112 Amir_2112 2337013 2337546 - hypothetical protein gene gene2158 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2112 Amir_2113 Amir_2113 Amir_2113 2337641 2338189 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: smt:Smal_2152 transcriptional regulator%2C TetR family gene gene2159 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2113 Amir_2114 Amir_2114 Amir_2114 2338211 2339716 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: smt:Smal_2153 major facilitator superfamily MFS_1 gene gene2160 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2114 Amir_2115 Amir_2115 Amir_2115 2339992 2341284 - cytochrome P450 PFAM: cytochrome P450~KEGG: mrd:Mrad2831_3880 cytochrome P450 gene gene2161 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2115 Amir_2116 Amir_2116 Amir_2116 2341316 2342485 - cytochrome P450 PFAM: cytochrome P450~KEGG: pag:PLES_17331 cytochrome P450 gene gene2162 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2116 Amir_2117 Amir_2117 Amir_2117 2342700 2343788 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: sus:Acid_6248 TetR family transcriptional regulator gene gene2163 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2117 Amir_2118 Amir_2118 Amir_2118 2344146 2344607 - thioesterase superfamily protein PFAM: thioesterase superfamily protein~KEGG: mxa:MXAN_4456 thioesterase family protein gene gene2164 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2118 Amir_2119 Amir_2119 Amir_2119 2344618 2345778 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: nmu:Nmul_A1807 hypothetical protein gene gene2165 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2119 Amir_2120 Amir_2120 Amir_2120 2345948 2346544 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: azo:azo0243 TetR family transcriptional regulator gene gene2166 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2120 Amir_2121 Amir_2121 Amir_2121 2346699 2347658 + hypothetical protein KEGG: hypothetical protein LOC761802 gene gene2167 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2121 Amir_2122 Amir_2122 Amir_2122 2347740 2348966 + glutamate--cysteine ligase GCS2 PFAM: glutamate--cysteine ligase GCS2~KEGG: acp:A2cp1_3936 glutamate--cysteine ligase gene gene2168 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2122 Amir_2123 Amir_2123 Amir_2123 2349328 2350656 + protein of unknown function DUF323 PFAM: protein of unknown function DUF323~KEGG: mxa:MXAN_7471 hypothetical protein gene gene2169 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2123 Amir_2124 Amir_2124 Amir_2124 2350657 2351415 + glutamine amidotransferase-like protein KEGG: mch:Mchl_5354 glutamine amidotransferase class-II gene gene2170 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2124 Amir_2125 Amir_2125 Amir_2125 2351412 2352374 + methyltransferase TIGRFAM: methyltransferase~KEGG: mxa:MXAN_7473 hypothetical protein gene gene2171 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2125 Amir_2126 Amir_2126 Amir_2126 2352448 2352675 - hypothetical protein gene gene2172 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2126 Amir_2127 Amir_2127 Amir_2127 2352944 2353807 + helix-turn-helix domain protein SMART: helix-turn-helix domain protein gene gene2173 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2127 Amir_2128 Amir_2128 Amir_2128 2353820 2354014 + protein of unknown function DUF397 PFAM: protein of unknown function DUF397 gene gene2174 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2128 Amir_2129 Amir_2129 Amir_2129 2354410 2354622 - hypothetical protein gene gene2175 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2129 Amir_2130 Amir_2130 Amir_2130 2354869 2355252 + Peptidoglycan-binding domain 1 protein PFAM: Peptidoglycan-binding domain 1 protein gene gene2176 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2130 Amir_2131 Amir_2131 Amir_2131 2355321 2355695 + Peptidoglycan-binding domain 1 protein PFAM: Peptidoglycan-binding domain 1 protein~KEGG: mes:Meso_0085 peptidoglycan-binding domain 1 gene gene2177 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2131 Amir_2132 Amir_2132 Amir_2132 2355760 2358585 - aconitate hydratase 1 TIGRFAM: aconitate hydratase 1~PFAM: aconitate hydratase domain protein~KEGG: eba:ebA6773 aconitate hydratase gene gene2178 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2132 Amir_2133 Amir_2133 Amir_2133 2358831 2359667 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: bat:BAS4648 ABC transporter%2C ATP-binding protein%2C putative gene gene2179 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2133 Amir_2134 Amir_2134 Amir_2134 2359664 2360314 + hypothetical protein KEGG: bce:BC4749 ABC transporter permease protein gene gene2180 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2134 Amir_2135 Amir_2135 Amir_2135 2360379 2360837 + AraC family transcriptional regulator KEGG: ade:Adeh_3822 AraC family transcriptional regulator gene gene2181 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2135 Amir_2136 Amir_2136 Amir_2136 2360848 2362002 - hypothetical protein KEGG: bch:Bcen2424_6766 PE-PGRS family protein gene gene2182 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2136 Amir_2137 Amir_2137 Amir_2137 2362104 2362868 + Silent information regulator protein Sir2 PFAM: Silent information regulator protein Sir2~KEGG: sat:SYN_00042 sir2 family protein gene gene2183 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2137 Amir_2138 Amir_2138 Amir_2138 2362949 2363524 + carbonic anhydrase PFAM: carbonic anhydrase~KEGG: xau:Xaut_2228 carbonate dehydratase gene gene2184 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2138 Amir_2139 Amir_2139 Amir_2139 2363636 2365168 + AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: sus:Acid_7357 AMP-dependent synthetase and ligase gene gene2185 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2139 Amir_2140 Amir_2140 Amir_2140 2365302 2366585 + NLP/P60 protein PFAM: NLP/P60 protein~KEGG: NlpC/P60-like cell-wall peptidase gene gene2186 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2140 Amir_2141 Amir_2141 Amir_2141 2366708 2367310 + RNA polymerase%2C sigma-24 subunit%2C ECF subfamily TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family~PFAM: sigma-70 region 2 domain protein%3B Sigma-70 region 4 type 2%3B sigma-70 region 4 domain protein~KEGG: mmr:Mmar10_0581 ECF subfamily RNA polymerase sigma-24 factor gene gene2187 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2141 Amir_2142 Amir_2142 Amir_2142 2367373 2367750 + putative transmembrane transport protein KEGG: rle:RL0353 putative transmembrane transport protein gene gene2188 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2142 Amir_2143 Amir_2143 Amir_2143 2368599 2369147 - molybdopterin-guanine dinucleotide biosynthesis protein A KEGG: pfl:PFL_3722 molybdopterin-guanine dinucleotide biosynthesis protein A gene gene2189 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2143 Amir_2144 Amir_2144 Amir_2144 2369297 2369941 - Thiopurine S-methyltransferase PFAM: thiopurine S-methyltransferase~KEGG: psa:PST_2541 thiopurine S-methyltransferase gene gene2190 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2144 Amir_2145 Amir_2145 Amir_2145 2370097 2371137 + ATPase associated with various cellular activities AAA_3 PFAM: ATPase associated with various cellular activities AAA_3%3B ATPase associated with various cellular activities AAA_5~KEGG: reh:H16_B1613 MoxR-like ATPase gene gene2191 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2145 Amir_2146 Amir_2146 Amir_2146 2371185 2372189 + protein of unknown function DUF58 PFAM: protein of unknown function DUF58~KEGG: pna:Pnap_3246 protein of unknown function DUF58 gene gene2192 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2146 Amir_2147 Amir_2147 Amir_2147 2372189 2373154 + von Willebrand factor type A PFAM: von Willebrand factor type A~SMART: von Willebrand factor type A~KEGG: azo:azo2864 hypothetical protein gene gene2193 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2147 Amir_2148 Amir_2148 Amir_2148 2373151 2373723 + hypothetical protein KEGG: swp:swp_0140 hypothetical protein gene gene2194 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2148 Amir_2149 Amir_2149 Amir_2149 2373734 2374621 - TRAP transporter solute receptor%2C TAXI family TIGRFAM: TRAP transporter solute receptor%2C TAXI family~KEGG: psa:PST_4124 periplasmic binding protein%2C putative gene gene2195 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2149 Amir_2150 Amir_2150 Amir_2150 2374618 2375988 - histidine kinase PFAM: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B histidine kinase HAMP region domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase HAMP region domain protein%3B histidine kinase A domain protein~KEGG: scl:sce7107 sensor histidine kinase gene gene2196 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2150 Amir_2151 Amir_2151 Amir_2151 2375993 2376646 - two component transcriptional regulator%2C winged helix family PFAM: response regulator receiver%3B transcriptional regulator domain protein~SMART: response regulator receiver~KEGG: afw:Anae109_0880 two component transcriptional regulator gene gene2197 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2151 Amir_2152 Amir_2152 Amir_2152 2376701 2377435 + ANTAR domain protein with unknown sensor PFAM: ANTAR domain protein%3B GAF domain protein~SMART: GAF domain protein~KEGG: sus:Acid_4463 putative GAF sensor protein gene gene2198 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2152 Amir_2153 Amir_2153 Amir_2153 2377876 2378334 + hypothetical protein KEGG: dvm:DvMF_1072 hypothetical protein gene gene2199 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2153 Amir_2154 Amir_2154 Amir_2154 2378381 2379298 - LPXTG-motif cell wall anchor domain protein TIGRFAM: LPXTG-motif cell wall anchor domain protein~KEGG: maq:Maqu_2160 hypothetical protein gene gene2200 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2154 Amir_2155 Amir_2155 Amir_2155 2379375 2380637 - hypothetical protein KEGG: maq:Maqu_2160 hypothetical protein gene gene2201 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2155 Amir_2156 Amir_2156 Amir_2156 2380880 2381521 + hypothetical protein KEGG: maq:Maqu_2160 hypothetical protein gene gene2202 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2156 Amir_2157 Amir_2157 Amir_2157 2381678 2382757 + virulence factor Mce family protein TIGRFAM: virulence factor Mce family protein~PFAM: Mammalian cell entry related domain protein~KEGG: bph:Bphy_2768 hypothetical protein gene gene2203 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2157 Amir_2158 Amir_2158 Amir_2158 2382757 2383785 + virulence factor Mce family protein TIGRFAM: virulence factor Mce family protein~PFAM: Mammalian cell entry related domain protein~KEGG: sfu:Sfum_0474 mammalian cell entry related domain protein gene gene2204 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2158 Amir_2159 Amir_2159 Amir_2159 2383782 2384747 + virulence factor Mce family protein TIGRFAM: virulence factor Mce family protein~PFAM: Mammalian cell entry related domain protein~KEGG: gme:Gmet_1272 virulence factor MCE-like protein-related protein gene gene2205 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2159 Amir_2160 Amir_2160 Amir_2160 2384747 2385751 + virulence factor Mce family protein TIGRFAM: virulence factor Mce family protein~PFAM: Mammalian cell entry related domain protein~KEGG: sat:SYN_00409 ABC-type transport system involved in resistance to organic solvents%2C periplasmic component gene gene2206 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2160 Amir_2161 Amir_2161 Amir_2161 2385748 2386737 + virulence factor Mce family protein TIGRFAM: virulence factor Mce family protein~PFAM: Mammalian cell entry related domain protein~KEGG: sat:SYN_00409 ABC-type transport system involved in resistance to organic solvents%2C periplasmic component gene gene2207 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2161 Amir_2162 Amir_2162 Amir_2162 2386743 2387789 + virulence factor Mce family protein TIGRFAM: virulence factor Mce family protein~PFAM: Mammalian cell entry related domain protein~KEGG: sat:SYN_00409 ABC-type transport system involved in resistance to organic solvents%2C periplasmic component gene gene2208 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2162 Amir_2163 Amir_2163 Amir_2163 2387893 2388432 + hypothetical protein gene gene2209 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2163 Amir_2164 Amir_2164 Amir_2164 2388640 2389527 + aminoglycoside phosphotransferase PFAM: aminoglycoside phosphotransferase~KEGG: bra:BRADO6829 putative phosphotransferase gene gene2210 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2164 Amir_2165 Amir_2165 Amir_2165 2389532 2389900 - sec-C motif domain protein KEGG: tgr:Tgr7_1062 sec-C motif domain protein gene gene2211 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2165 Amir_2166 Amir_2166 Amir_2166 2389972 2391369 - Cellulase KEGG: mxa:MXAN_4837 endoglucanase~PFAM: glycoside hydrolase family 6%3B cellulose- binding family II~SMART: cellulose-binding family II gene gene2212 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2166 Amir_2167 Amir_2167 Amir_2167 2392660 2395584 + glycoside hydrolase family 48 PFAM: glycoside hydrolase family 48%3B cellulose- binding family II~SMART: cellulose-binding family II~KEGG: hch:HCH_02465 RTX toxins and related Ca2+- binding protein gene gene2213 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2167 Amir_2168 Amir_2168 Amir_2168 2395750 2398377 + Beta-glucosidase PFAM: glycoside hydrolase family 3 domain protein~KEGG: bha:BH1908 glucan 1%2C4-beta-glucosidase gene gene2214 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2168 Amir_2169 Amir_2169 Amir_2169 2398377 2399390 + transcriptional regulator%2C LacI family PFAM: regulatory protein LacI%3B periplasmic binding protein/LacI transcriptional regulator~SMART: regulatory protein LacI~KEGG: bam:Bamb_4929 LacI family transcription regulator gene gene2215 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2169 Amir_2170 Amir_2170 Amir_2170 2399697 2401295 + extracellular solute-binding protein family 1 PFAM: extracellular solute-binding protein family 1~KEGG: bha:BH0482 lipoprotein gene gene2216 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2170 Amir_2171 Amir_2171 Amir_2171 2401282 2402256 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: bha:BH0484 transmembrane lipoprotein gene gene2217 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2171 Amir_2172 Amir_2172 Amir_2172 2402253 2403218 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: bsu:BSU30170 hypothetical protein gene gene2218 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2172 Amir_2173 Amir_2173 Amir_2173 2403256 2405238 + Beta-galactosidase PFAM: Glycoside hydrolase family 42 domain protein%3B Beta-galactosidase trimerisation domain protein%3B Beta-galactosidase domain protein~KEGG: bha:BH3701 beta-galactosidase gene gene2219 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2173 Amir_2174 Amir_2174 Amir_2174 2405213 2407153 + conserved hypothetical protein KEGG: xcv:XCV1806 hypothetical protein gene gene2220 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2174 Amir_2175 Amir_2175 Amir_2175 2407165 2407473 + CutA1 divalent ion tolerance protein PFAM: CutA1 divalent ion tolerance protein~KEGG: bbr:BB0060 putative periplasmic divalent cation tolerance protein gene gene2221 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2175 Amir_2176 Amir_2176 Amir_2176 2407562 2407939 + transcriptional regulator%2C MerR family PFAM: regulatory protein MerR~SMART: regulatory protein MerR~KEGG: gur:Gura_3524 MerR family transcriptional regulator gene gene2222 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2176 Amir_2177 Amir_2177 Amir_2177 2408010 2408375 - hypothetical protein gene gene2223 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2177 Amir_2178 Amir_2178 Amir_2178 2408563 2409540 - Beta-lactamase PFAM: beta-lactamase~KEGG: bcj:BCAM2165 putative beta-lactamase%2C class A gene gene2224 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2178 Amir_2179 Amir_2179 Amir_2179 2409598 2412282 - FAD linked oxidase domain protein PFAM: FAD linked oxidase domain protein%3B protein of unknown function DUF224 cysteine-rich region domain protein~KEGG: ade:Adeh_0810 hypothetical protein gene gene2225 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2179 Amir_2180 Amir_2180 Amir_2180 2412409 2413113 + 3-oxoacyl-(acyl-carrier-protein) reductase TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase~PFAM: short-chain dehydrogenase/reductase SDR%3B KR domain protein~KEGG: prw:PsycPRwf_0457 3-oxoacyl-(acyl-carrier- protein) reductase gene gene2226 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2180 Amir_2181 Amir_2181 Amir_2181 2413178 2413945 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: mxa:MXAN_6034 enoyl-(acyl carrier protein) reductase gene gene2227 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2181 Amir_2182 Amir_2182 Amir_2182 2414041 2415075 + ferrochelatase KEGG: sus:Acid_1029 ferrochelatase~TIGRFAM: ferrochelatase~PFAM: ferrochelatase gene gene2228 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2182 Amir_2183 Amir_2183 Amir_2183 2415072 2415737 + hypothetical protein KEGG: hypothetical protein gene gene2229 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2183 Amir_2184 Amir_2184 Amir_2184 2415795 2416568 + hypothetical protein KEGG: bph:Bphy_2507 hypothetical protein gene gene2230 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2184 Amir_2185 Amir_2185 Amir_2185 2416673 2417386 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B KR domain protein%3B NAD-dependent epimerase/dehydratase~KEGG: hne:HNE_0018 short chain dehydrogenase/reductase family oxidoreductase gene gene2231 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2185 Amir_2186 Amir_2186 Amir_2186 2417793 2418407 + hypothetical protein KEGG: BSM%3B submaxillary mucin 2 gene gene2232 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2186 Amir_2187 Amir_2187 Amir_2187 2418667 2419101 + hypothetical protein gene gene2233 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2187 Amir_2188 Amir_2188 Amir_2188 2419098 2419709 + hypothetical protein gene gene2234 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2188 Amir_2189 Amir_2189 Amir_2189 2419713 2421077 + hypothetical protein KEGG: GH21940 gene product from transcript GH21940- RA gene gene2235 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2189 Amir_2190 Amir_2190 Amir_2190 2421169 2421963 + hypothetical protein gene gene2236 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2190 Amir_2191 Amir_2191 Amir_2191 2422379 2424196 + glycoside hydrolase family 6 PFAM: glycoside hydrolase family 6%3B cellulose- binding family II~SMART: cellulose-binding family II~KEGG: sde:Sde_2272 cellobiohydrolase A (1 4-beta- cellobiosidase A)-like gene gene2237 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2191 Amir_2192 Amir_2192 Amir_2192 2424621 2426006 + magnesium protoporphyrin chelatase%2C putative KEGG: sus:Acid_2208 magnesium protoporphyrin chelatase%2C putative gene gene2238 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2192 Amir_2193 Amir_2193 Amir_2193 2426003 2427949 + von Willebrand factor type A SMART: von Willebrand factor type A~KEGG: aba:Acid345_3257 von Willebrand factor%2C type A gene gene2239 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2193 Amir_2194 Amir_2194 Amir_2194 2427952 2429133 - RNA polymerase%2C sigma-24 subunit%2C ECF subfamily TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family~PFAM: sigma-70 region 2 domain protein~KEGG: GA27442 gene product from transcript GA27442- RA gene gene2240 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2194 Amir_2195 Amir_2195 Amir_2195 2429225 2429695 - NUDIX hydrolase PFAM: NUDIX hydrolase~KEGG: eca:ECA2974 MutT-like protein gene gene2241 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2195 Amir_2196 Amir_2196 Amir_2196 2429779 2430698 + pseudogene gene2242 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2196 Amir_2197 Amir_2197 Amir_2197 2430700 2432268 - methyl-accepting chemotaxis sensory transducer PFAM: chemotaxis sensory transducer%3B histidine kinase HAMP region domain protein~SMART: chemotaxis sensory transducer%3B histidine kinase HAMP region domain protein~KEGG: aba:Acid345_1672 methyl-accepting chemotaxis sensory transducer gene gene2243 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2197 Amir_2198 Amir_2198 Amir_2198 2432446 2434215 - cytochrome c oxidase%2C subunit I KEGG: bha:BH2614 cytochrome caa3 oxidase (subunit I)~TIGRFAM: cytochrome c oxidase%2C subunit I~PFAM: cytochrome c oxidase subunit I gene gene2244 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2198 Amir_2199 Amir_2199 Amir_2199 2434248 2435674 - pseudogene gene2245 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2199 Amir_2200 Amir_2200 Amir_2200 2435844 2436125 + pseudogene gene2246 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2200 Amir_2201 Amir_2201 Amir_2201 2436340 2437578 + cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside ligase KEGG: afw:Anae109_2496 cysteinyl-tRNA synthetase~TIGRFAM: cysteine/1-D-myo-inosityl 2-amino-2-deoxy- alpha-D-glucopyranoside ligase~PFAM: Cysteinyl-tRNA synthetase class Ia gene gene2247 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2201 Amir_2202 Amir_2202 Amir_2202 2437727 2439520 - peptidase S8 and S53 subtilisin kexin sedolisin PFAM: peptidase S8 and S53 subtilisin kexin sedolisin%3B Proprotein convertase P%3B Ig family protein%3B proteinase inhibitor I9 subtilisin propeptide~KEGG: mca:MCA0875 serine protease gene gene2248 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2202 Amir_2203 Amir_2203 Amir_2203 2439721 2440173 - conserved hypothetical protein KEGG: scl:sce6114 hypothetical protein gene gene2249 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2203 Amir_2204 Amir_2204 Amir_2204 2440558 2441238 + hypothetical protein KEGG: sus:Acid_6164 Ig family protein gene gene2250 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2204 Amir_2205 Amir_2205 Amir_2205 2441280 2441819 + hypothetical protein KEGG: similar to glycoprotein (predicted) gene gene2251 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2205 Amir_2206 Amir_2206 Amir_2206 2441816 2442745 + peptidase S26B%2C signal peptidase TIGRFAM: peptidase S26B%2C signal peptidase~PFAM: peptidase S24 and S26 domain protein~KEGG: similar to trefoil factor gene gene2252 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2206 Amir_2207 Amir_2207 Amir_2207 2442742 2443476 + two component transcriptional regulator%2C winged helix family PFAM: response regulator receiver%3B transcriptional regulator domain protein~SMART: response regulator receiver~KEGG: dvm:DvMF_0882 two component transcriptional regulator%2C winged helix family gene gene2253 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2207 Amir_2208 Amir_2208 Amir_2208 2443473 2443877 + response regulator receiver protein PFAM: response regulator receiver~SMART: response regulator receiver~KEGG: aba:Acid345_3504 response regulator receiver protein gene gene2254 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2208 Amir_2209 Amir_2209 Amir_2209 2443831 2445030 - GAF sensor signal transduction histidine kinase PFAM: ATP-binding region ATPase domain protein%3B GAF domain protein%3B histidine kinase A domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B GAF domain protein~KEGG: amc:MADE_03205 histidine kinase response regulator hybrid protein gene gene2255 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2209 Amir_2210 Amir_2210 Amir_2210 2445326 2446222 - protein of unknown function DUF75 PFAM: protein of unknown function DUF75~KEGG: sfu:Sfum_3209 hypothetical protein gene gene2256 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2210 Amir_2211 Amir_2211 Amir_2211 2446273 2449809 + methionine synthase TIGRFAM: methionine synthase~PFAM: homocysteine S-methyltransferase%3B Methionine synthase B12-binding module cap domain protein%3B cobalamin B12-binding domain protein%3B dihydropteroate synthase DHPS%3B Vitamin B12 dependent methionine synthase activation region~KEGG: gdi:GDI3502 putative methionine synthase gene gene2257 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2211 Amir_2212 Amir_2212 Amir_2212 2449922 2450584 + HAD-superfamily hydrolase%2C subfamily IA%2C variant 3 TIGRFAM: HAD-superfamily hydrolase%2C subfamily IA%2C variant 3~PFAM: Haloacid dehalogenase domain protein hydrolase~KEGG: smt:Smal_0452 HAD-superfamily hydrolase%2C subfamily IA%2C variant 3 gene gene2258 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2212 Amir_2213 Amir_2213 Amir_2213 2450603 2451280 - ferric iron reductase PFAM: ferric iron reductase~KEGG: aav:Aave_3725 ferric iron reductase protein FhuF gene gene2259 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2213 Amir_2214 Amir_2214 Amir_2214 2451273 2451860 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: acr:Acry_3038 TetR family transcriptional regulator gene gene2260 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2214 Amir_2215 Amir_2215 Amir_2215 2451964 2453187 + NADH:flavin oxidoreductase/NADH oxidase PFAM: NADH:flavin oxidoreductase/NADH oxidase~KEGG: pag:PLES_23881 putative FMN oxidoreductase gene gene2261 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2215 Amir_2216 Amir_2216 Amir_2216 2453184 2453984 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B KR domain protein%3B NAD-dependent epimerase/dehydratase~KEGG: pau:PA14_08440 putative short chain alcohol dehydrogenase gene gene2262 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2216 Amir_2217 Amir_2217 Amir_2217 2454077 2454523 + conserved hypothetical protein KEGG: sdn:Sden_0673 hypothetical protein gene gene2263 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2217 Amir_2218 Amir_2218 Amir_2218 2454564 2454845 + phosphoribosyl-ATP diphosphatase TIGRFAM: phosphoribosyl-ATP diphosphatase~PFAM: phosphoribosyl-ATP pyrophosphohydrolase~KEGG: xfn:XfasM23_1346 phosphoribosyl-ATP diphosphatase gene gene2264 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2218 Amir_2219 Amir_2219 Amir_2219 2454877 2455815 + Auxin Efflux Carrier PFAM: Auxin Efflux Carrier~KEGG: dvm:DvMF_1323 auxin efflux carrier gene gene2265 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2219 Amir_2220 Amir_2220 Amir_2220 2455982 2456831 + pseudogene gene2266 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2220 Amir_2221 Amir_2221 Amir_2221 2456832 2457602 - conserved hypothetical protein KEGG: smt:Smal_1417 hypothetical protein gene gene2267 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2221 Amir_2222 Amir_2222 Amir_2222 2457731 2458624 - RecB family exonuclease-like protein KEGG: hypothetical protein gene gene2268 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2222 Amir_2223 Amir_2223 Amir_2223 2458685 2459815 + peptidase M50 PFAM: peptidase M50~KEGG: aeh:Mlg_1368 peptidase M50 gene gene2269 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2223 Amir_2224 Amir_2224 Amir_2224 2459869 2460524 + pseudogene gene2270 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2224 Amir_2225 Amir_2225 Amir_2225 2460547 2461176 - two component transcriptional regulator%2C LuxR family PFAM: response regulator receiver%3B regulatory protein LuxR~SMART: response regulator receiver%3B regulatory protein LuxR~KEGG: scl:sce5431 two-component system response regulator gene gene2271 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2225 Amir_2226 Amir_2226 Amir_2226 2461212 2462324 - histidine kinase PFAM: histidine kinase dimerization and phosphoacceptor region%3B ATP-binding region ATPase domain protein~KEGG: scl:sce5432 putative two-component system sensor kinase gene gene2272 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2226 Amir_2227 Amir_2227 Amir_2227 2462436 2462978 + conserved hypothetical protein KEGG: bat:BAS2996 hypothetical protein gene gene2273 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2227 Amir_2228 Amir_2228 Amir_2228 2463053 2463880 + tRNA methyltransferase complex GCD14 subunit PFAM: tRNA methyltransferase complex GCD14 subunit~KEGG: sfu:Sfum_2514 SAM-dependent methyltransferase gene gene2274 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2228 Amir_2229 Amir_2229 Amir_2229 2463949 2464839 - hypothetical protein KEGG: scl:sce5792 hypothetical protein gene gene2275 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2229 Amir_2230 Amir_2230 Amir_2230 2465044 2466003 - hypothetical protein KEGG: scl:sce5792 hypothetical protein gene gene2276 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2230 Amir_2231 Amir_2231 Amir_2231 2466722 2468521 + AAA ATPase central domain protein PFAM: AAA ATPase central domain protein~SMART: AAA ATPase~KEGG: gur:Gura_2842 AAA family ATPase%2C CDC48 subfamily protein gene gene2277 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2231 Amir_2232 Amir_2232 Amir_2232 2468559 2469467 - two component transcriptional regulator%2C LuxR family PFAM: response regulator receiver%3B regulatory protein LuxR%3B Sigma-70 region 4 type 2%3B sigma-70 region 4 domain protein~SMART: response regulator receiver%3B regulatory protein LuxR~KEGG: scl:sce5431 two-component system response regulator gene gene2278 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2232 Amir_2233 Amir_2233 Amir_2233 2469464 2470537 - histidine kinase PFAM: histidine kinase dimerization and phosphoacceptor region%3B ATP-binding region ATPase domain protein~KEGG: scl:sce5432 putative two-component system sensor kinase gene gene2279 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2233 Amir_2234 Amir_2234 Amir_2234 2470663 2471577 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: cak:Caul_1642 ABC transporter related gene gene2280 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2234 Amir_2235 Amir_2235 Amir_2235 2471574 2472341 + hypothetical protein KEGG: rpb:RPB_1462 binding-protein-dependent transport systems inner membrane component gene gene2281 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2235 Amir_2236 Amir_2236 Amir_2236 2472380 2473294 + aldo/keto reductase PFAM: aldo/keto reductase~KEGG: ank:AnaeK_3196 aldo/keto reductase gene gene2282 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2236 Amir_2237 Amir_2237 Amir_2237 2473356 2473865 - NUDIX hydrolase PFAM: NUDIX hydrolase~KEGG: pmr:PMI1779 NUDIX hydrolase gene gene2283 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2237 Amir_2238 Amir_2238 Amir_2238 2474013 2476481 + protein of unknown function DUF214 PFAM: protein of unknown function DUF214~KEGG: ade:Adeh_2042 hypothetical protein gene gene2284 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2238 Amir_2239 Amir_2239 Amir_2239 2476536 2478035 + protein of unknown function DUF245 domain protein PFAM: protein of unknown function DUF245 domain protein%3B protein of unknown function DUF275 domain protein gene gene2285 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2239 Amir_2240 Amir_2240 Amir_2240 2478214 2478408 + protein of unknown function DUF797 PFAM: protein of unknown function DUF797 gene gene2286 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2240 Amir_2241 Amir_2241 Amir_2241 2478472 2479320 + 20S proteasome A and B subunits PFAM: 20S proteasome A and B subunits~KEGG: GI10892 gene product from transcript GI10892- RA gene gene2287 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2241 Amir_2242 Amir_2242 Amir_2242 2479365 2480156 + 20S proteasome A and B subunits PFAM: 20S proteasome A and B subunits~KEGG: proteasome subunit alpha type 2%3B K02726 20S proteasome subunit alpha 2 gene gene2288 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2242 Amir_2243 Amir_2243 Amir_2243 2480214 2480768 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: bja:blr4790 putative oxidoreductase gene gene2289 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2243 Amir_2244 Amir_2244 Amir_2244 2481067 2481660 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: azc:AZC_1061 transcriptional regulator gene gene2290 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2244 Amir_2245 Amir_2245 Amir_2245 2482116 2484986 - transcriptional regulator%2C LuxR family PFAM: regulatory protein LuxR%3B Sigma-70 region 4 type 2~SMART: regulatory protein LuxR%3B AAA ATPase~KEGG: afw:Anae109_3347 transcriptional activator domain-containing protein gene gene2291 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2245 Amir_2246 Amir_2246 Amir_2246 2485172 2486620 - phosphoesterase PA-phosphatase related PFAM: phosphoesterase PA-phosphatase related%3B diacylglycerol kinase catalytic region~SMART: phosphoesterase PA-phosphatase related%3B diacylglycerol kinase catalytic region~KEGG: scl:sce9292 hypothetical protein gene gene2292 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2246 Amir_2247 Amir_2247 Amir_2247 2486678 2488036 + protein of unknown function DUF245 domain protein PFAM: protein of unknown function DUF245 domain protein%3B protein of unknown function DUF275 domain protein gene gene2293 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2247 Amir_2248 Amir_2248 Amir_2248 2488163 2489047 + Activator of Hsp90 ATPase 1 family protein PFAM: Activator of Hsp90 ATPase 1 family protein~KEGG: afw:Anae109_0483 activator of HSP90 ATPase 1 family protein gene gene2294 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2248 Amir_2249 Amir_2249 Amir_2249 2489337 2490320 + putative transcriptional regulator protein KEGG: mxa:MXAN_1359 hypothetical protein gene gene2295 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2249 Amir_2250 Amir_2250 Amir_2250 2490317 2491282 + putative transcriptional regulator protein KEGG: mxa:MXAN_1360 hypothetical protein gene gene2296 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2250 Amir_2251 Amir_2251 Amir_2251 2491567 2491911 + twin-arginine translocation protein%2C TatA/E family subunit TIGRFAM: twin-arginine translocation protein%2C TatA/E family subunit~PFAM: sec-independent translocation protein mttA/Hcf106~KEGG: GG15783 gene product from transcript GG15783- RA gene gene2297 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2251 Amir_2252 Amir_2252 Amir_2252 2492065 2493153 + Sec-independent protein translocase%2C TatC subunit TIGRFAM: Sec-independent protein translocase%2C TatC subunit~PFAM: Sec-independent periplasmic protein translocase~KEGG: nar:Saro_1096 sec-independent protein translocase TatC gene gene2298 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2252 Amir_2253 Amir_2253 Amir_2253 2493325 2494263 + diacylglycerol kinase catalytic region PFAM: diacylglycerol kinase catalytic region~SMART: diacylglycerol kinase catalytic region~KEGG: mxa:MXAN_6724 putative lipid kinase gene gene2299 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2253 Amir_2254 Amir_2254 Amir_2254 2494410 2497400 + DEAD/DEAH box helicase domain protein PFAM: DEAD/DEAH box helicase domain protein%3B DSH domain protein%3B helicase domain protein%3B type III restriction protein res subunit~SMART: DEAD-like helicase%3B helicase domain protein~KEGG: predicted protein gene gene2300 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2254 Amir_2255 Amir_2255 Amir_2255 2497519 2498205 + hypothetical protein KEGG: scl:sce8934 hypothetical protein gene gene2301 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2255 Amir_2256 Amir_2256 Amir_2256 2498480 2499784 + conserved hypothetical protein KEGG: hypothetical protein gene gene2302 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2256 Amir_2257 Amir_2257 Amir_2257 2500259 2501308 - 5'-3' exonuclease PFAM: 5'-3' exonuclease~SMART: 5'-3' exonuclease%3B Helix-hairpin-helix domain protein class 2~KEGG: rce:RC1_2483 DNA polymerase I%2C putative gene gene2303 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2257 Amir_2258 Amir_2258 Amir_2258 2501311 2502441 + peptidase M24 PFAM: peptidase M24%3B creatinase~KEGG: xca:xccb100_1756 putative proline dipeptidase gene gene2304 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2258 Amir_2259 Amir_2259 Amir_2259 2502438 2502887 + transcriptional regulator%2C AsnC family PFAM: regulatory protein AsnC/Lrp family~SMART: regulatory protein AsnC/Lrp family~KEGG: scl:sce5626 leucine responsive regulatory protein gene gene2305 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2259 Amir_2260 Amir_2260 Amir_2260 2502933 2503679 - aminotransferase class IV PFAM: aminotransferase class IV~KEGG: xac:XAC1291 hypothetical protein gene gene2306 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2260 Amir_2261 Amir_2261 Amir_2261 2503900 2505099 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: azc:AZC_3713 putative transmembrane protein gene gene2307 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2261 Amir_2262 Amir_2262 Amir_2262 2505398 2506690 + diguanylate cyclase KEGG: cvi:CV_1143 hypothetical protein~TIGRFAM: diguanylate cyclase~PFAM: GGDEF domain containing protein~SMART: GGDEF domain containing protein gene gene2308 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2262 Amir_2263 Amir_2263 Amir_2263 2506855 2510202 + hypothetical protein KEGG: similar to CG6915-PA gene gene2309 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2263 Amir_2264 Amir_2264 Amir_2264 2510299 2511234 - peptidase S58 DmpA PFAM: peptidase S58 DmpA~KEGG: xau:Xaut_4121 peptidase S58 DmpA gene gene2310 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2264 Amir_2265 Amir_2265 Amir_2265 2511342 2513468 + hypothetical protein KEGG: apl:APL_1681 hypothetical protein gene gene2311 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2265 Amir_2266 Amir_2266 Amir_2266 2513485 2515038 - Pyridoxal-dependent decarboxylase PFAM: Pyridoxal-dependent decarboxylase~KEGG: spe:Spro_3049 pyridoxal-dependent decarboxylase gene gene2312 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2266 Amir_2267 Amir_2267 Amir_2267 2515213 2516898 - DEAD/DEAH box helicase domain protein PFAM: DEAD/DEAH box helicase domain protein%3B helicase domain protein%3B DbpA RNA-binding domain protein~SMART: DEAD-like helicase%3B helicase domain protein~KEGG: scl:sce0700 ATP-independent RNA helicase gene gene2313 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2267 Amir_2268 Amir_2268 Amir_2268 2517111 2517725 - RelA/SpoT domain protein PFAM: RelA/SpoT domain protein~KEGG: bha:BH1885 hypothetical protein gene gene2314 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2268 Amir_2269 Amir_2269 Amir_2269 2517944 2518825 + protein of unknown function DUF6 transmembrane PFAM: protein of unknown function DUF6 transmembrane~KEGG: gbm:Gbem_3934 protein of unknown function DUF6 transmembrane gene gene2315 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2269 Amir_2270 Amir_2270 Amir_2270 2519123 2519617 - hypothetical protein gene gene2316 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2270 Amir_2271 Amir_2271 Amir_2271 2520093 2520635 - YceI family protein PFAM: YceI family protein~KEGG: afw:Anae109_3638 YceI family protein gene gene2317 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2271 Amir_2272 Amir_2272 Amir_2272 2520729 2521229 + transcriptional regulator%2C MarR family PFAM: regulatory protein MarR~SMART: regulatory protein MarR~KEGG: rpa:RPA0821 MarR family transcriptional regulator gene gene2318 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2272 Amir_2273 Amir_2273 Amir_2273 2521578 2522549 + ATPase associated with various cellular activities AAA_3 PFAM: ATPase associated with various cellular activities AAA_3%3B magnesium chelatase ChlI subunit%3B ATPase associated with various cellular activities AAA_5~KEGG: gur:Gura_0187 ATPase gene gene2319 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2273 Amir_2274 Amir_2274 Amir_2274 2522546 2523670 + protein of unknown function DUF58 PFAM: protein of unknown function DUF58~KEGG: scl:sce4442 hypothetical protein gene gene2320 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2274 Amir_2275 Amir_2275 Amir_2275 2523842 2525509 + AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: eba:ebA1206 putative acetyl-coenzyme A synthetase gene gene2321 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2275 Amir_2276 Amir_2276 Amir_2276 2525812 2526033 - hypothetical protein gene gene2322 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2276 Amir_2277 Amir_2277 Amir_2277 2526257 2529535 + methylmalonyl-CoA mutase%2C large subunit KEGG: reu:Reut_A0253 methylmalonyl-CoA mutase%2C N- terminal:methylmalonyl-CoA mutase%2C C-terminal~TIGRFAM: methylmalonyl-CoA mutase%2C large subunit~PFAM: methylmalonyl-CoA mutase%3B cobalamin B12- binding domain protein%3B ArgK protein gene gene2323 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2277 Amir_2278 Amir_2278 Amir_2278 2529782 2530525 + Tetratricopeptide TPR_2 repeat protein PFAM: Tetratricopeptide TPR_2 repeat protein%3B TPR repeat-containing protein%3B Tetratricopeptide TPR_4~SMART: Tetratricopeptide domain protein~KEGG: bid:Bind_3201 TPR repeat-containing protein gene gene2324 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2278 Amir_2279 Amir_2279 Amir_2279 2530761 2533019 - hypothetical protein KEGG: GH15499 gene product from transcript GH15499- RA gene gene2325 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2279 Amir_2280 Amir_2280 Amir_2280 2533375 2535417 + DNA gyrase subunit B domain protein PFAM: DNA gyrase subunit B domain protein%3B TOPRIM domain protein%3B ATP-binding region ATPase domain protein%3B DNA topoisomerase type IIA subunit B region 2 domain protein~SMART: DNA topoisomerase II%3B ATP-binding region ATPase domain protein~KEGG: bsu:BSU00060 DNA gyrase subunit B gene gene2326 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2280 Amir_2281 Amir_2281 Amir_2281 2535438 2538869 + DNA topoisomerase (ATP-hydrolyzing) KEGG: bcz:BCZK0006 DNA gyrase subunit A~PFAM: DNA gyrase/topoisomerase IV subunit A%3B DNA gyrase repeat beta-propeller~SMART: DNA gyrase/topoisomerase IV subunit A%3B Hedgehog/intein hint domain protein gene gene2327 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2281 Amir_2282 Amir_2282 Amir_2282 2539016 2539726 + Xylose isomerase domain protein TIM barrel PFAM: Xylose isomerase domain protein TIM barrel~KEGG: atc:AGR_L_3397 hypothetical protein gene gene2328 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2282 Amir_2283 Amir_2283 Amir_2283 2539803 2540360 + conserved hypothetical protein KEGG: scl:sce8945 hypothetical protein gene gene2329 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2283 Amir_2284 Amir_2284 Amir_2284 2540484 2541632 + Luciferase-like monooxygenase PFAM: Luciferase-like monooxygenase~KEGG: pfo:Pfl01_0703 luciferase-like gene gene2330 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2284 Amir_2285 Amir_2285 Amir_2285 2541629 2542222 + NADPH-dependent FMN reductase PFAM: NADPH-dependent FMN reductase~KEGG: rsq:Rsph17025_0771 NADPH-dependent FMN reductase gene gene2331 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2285 Amir_2286 Amir_2286 Amir_2286 2542609 2543472 + ATP phosphoribosyltransferase KEGG: hypothetical protein%3B K00765 ATP phosphoribosyltransferase~TIGRFAM: ATP phosphoribosyltransferase~PFAM: ATP phosphoribosyltransferase catalytic region%3B Histidine biosynthesis protein HisG domain gene gene2332 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2286 Amir_2287 Amir_2287 Amir_2287 2543824 2546346 - diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) KEGG: msl:Msil_2593 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)~TIGRFAM: diguanylate cyclase%3B PAS sensor protein~PFAM: GGDEF domain containing protein%3B EAL domain protein%3B PAS fold-3 domain protein%3B PAS fold-4 domain protein%3B PAS fold domain protein~SMART: GGDEF domain containing protein%3B EAL domain protein gene gene2333 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2287 Amir_2288 Amir_2288 Amir_2288 2546957 2547448 + Activator of Hsp90 ATPase 1 family protein PFAM: Activator of Hsp90 ATPase 1 family protein~KEGG: pol:Bpro_1654 hypothetical protein gene gene2334 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2288 Amir_2289 Amir_2289 Amir_2289 2547608 2548195 - hypothetical protein gene gene2335 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2289 Amir_2290 Amir_2290 Amir_2290 2548308 2549093 - hypothetical protein KEGG: bcy:Bcer98_2113 hypothetical protein gene gene2336 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2290 Amir_2291 Amir_2291 Amir_2291 2549090 2550697 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: bcy:Bcer98_2114 ABC transporter-related protein gene gene2337 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2291 Amir_2292 Amir_2292 Amir_2292 2550694 2551767 - cobalt transport protein PFAM: cobalt transport protein~KEGG: hha:Hhal_0811 NADH/ubiquinone/plastoquinone (complex I) gene gene2338 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2292 Amir_2293 Amir_2293 Amir_2293 2551764 2551892 - hypothetical protein gene gene2339 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2293 Amir_2294 Amir_2294 Amir_2294 2551889 2552758 - hypothetical protein KEGG: MTA2%3B hydroxyproline-rich glycoprotein gene gene2340 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2294 Amir_2295 Amir_2295 Amir_2295 2552755 2554044 - LPXTG-motif cell wall anchor domain protein TIGRFAM: LPXTG-motif cell wall anchor domain protein~KEGG: hypothetical protein gene gene2341 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2295 Amir_2296 Amir_2296 Amir_2296 2554364 2554993 - Methyltransferase type 11 PFAM: Methyltransferase type 11%3B Methyltransferase type 12~KEGG: bur:Bcep18194_A5869 hypothetical protein gene gene2342 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2296 Amir_2297 Amir_2297 Amir_2297 2555032 2555436 - hypothetical protein gene gene2343 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2297 Amir_2298 Amir_2298 Amir_2298 2555558 2556727 + ROK family protein PFAM: ROK family protein~KEGG: vei:Veis_3275 ROK family protein gene gene2344 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2298 Amir_2299 Amir_2299 Amir_2299 2557317 2558453 + oxidoreductase domain protein PFAM: oxidoreductase domain protein%3B Oxidoreductase domain~KEGG: bha:BH0710 hypothetical protein gene gene2345 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2299 Amir_2300 Amir_2300 Amir_2300 2558507 2559511 + Xylose isomerase domain protein TIM barrel PFAM: Xylose isomerase domain protein TIM barrel%3B AP endonuclease 2 domain protein~KEGG: vei:Veis_3268 xylose isomerase domain protein TIM barrel gene gene2346 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2300 Amir_2301 Amir_2301 Amir_2301 2559650 2560891 + FAD linked oxidase domain protein PFAM: FAD linked oxidase domain protein%3B D- arabinono-14-lactone oxidase~KEGG: hypothetical protein gene gene2347 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2301 Amir_2302 Amir_2302 Amir_2302 2561488 2562660 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: swi:Swit_4414 protein of unknown function DUF894%2C DitE gene gene2348 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2302 Amir_2303 Amir_2303 Amir_2303 2562725 2562820 + hypothetical protein gene gene2349 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2303 Amir_2304 Amir_2304 Amir_2304 2562817 2563404 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: rlt:Rleg2_0103 transcriptional regulator%2C TetR family gene gene2350 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2304 Amir_2305 Amir_2305 Amir_2305 2563426 2563617 - hypothetical protein gene gene2351 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2305 Amir_2306 Amir_2306 Amir_2306 2563846 2564202 + anti-sigma-factor antagonist TIGRFAM: anti-anti-sigma factor~PFAM: Sulfate transporter/antisigma-factor antagonist STAS~KEGG: rpe:RPE_3910 anti-sigma-factor antagonist gene gene2352 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2306 Amir_2307 Amir_2307 Amir_2307 2564267 2564923 + methylase TIGRFAM: methylase~PFAM: methyltransferase small~KEGG: acp:A2cp1_0395 modification methylase%2C HemK family gene gene2353 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2307 Amir_2308 Amir_2308 Amir_2308 2564958 2565125 + zinc finger CDGSH-type domain protein SMART: zinc finger CDGSH-type domain protein gene gene2354 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2308 Amir_2309 Amir_2309 Amir_2309 2565264 2566280 - hypothetical protein KEGG: pzu:PHZ_c0782 hypothetical protein gene gene2355 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2309 Amir_2310 Amir_2310 Amir_2310 2566506 2567657 - glutamate--cysteine ligase GCS2 PFAM: glutamate--cysteine ligase GCS2~KEGG: dsh:Dshi_1749 carboxylate-amine ligase gene gene2356 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2310 Amir_2311 Amir_2311 Amir_2311 2567744 2568781 - Luciferase-like monooxygenase PFAM: Luciferase-like monooxygenase~KEGG: bbt:BBta_7516 putative alkanal monooxygenase gene gene2357 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2311 Amir_2312 Amir_2312 Amir_2312 2568801 2570450 - PAS/PAC sensor signal transduction histidine kinase KEGG: mxa:MXAN_2785 sensory box histidine kinase/response regulator~TIGRFAM: PAS sensor protein~PFAM: ATP-binding region ATPase domain protein%3B PAS fold-3 domain protein%3B histidine kinase A domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein gene gene2358 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2312 Amir_2313 Amir_2313 Amir_2313 2570477 2570764 - hypothetical protein gene gene2359 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2313 Amir_2314 Amir_2314 Amir_2314 2570769 2573942 - hypothetical protein KEGG: SNF2 superfamily protein gene gene2360 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2314 Amir_2315 Amir_2315 Amir_2315 2573920 2575962 - flagellar biosynthesis protein FlhA TIGRFAM: flagellar biosynthesis protein FlhA~PFAM: type III secretion FHIPEP protein~KEGG: bha:BH2438 flagellar biosynthesis protein FlhA gene gene2361 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2315 Amir_2316 Amir_2316 Amir_2316 2576069 2576545 - hypothetical protein gene gene2362 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2316 Amir_2317 Amir_2317 Amir_2317 2576551 2576913 - response regulator receiver protein PFAM: response regulator receiver~SMART: response regulator receiver~KEGG: dds:Ddes_0324 response regulator receiver protein gene gene2363 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2317 Amir_2318 Amir_2318 Amir_2318 2576910 2577395 - conserved hypothetical protein KEGG: aba:Acid345_1530 hypothetical protein gene gene2364 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2318 Amir_2319 Amir_2319 Amir_2319 2577392 2577781 - response regulator receiver protein PFAM: response regulator receiver~SMART: response regulator receiver~KEGG: aba:Acid345_1527 response regulator receiver protein%2C CheY gene gene2365 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2319 Amir_2320 Amir_2320 Amir_2320 2577766 2578641 - MCP methyltransferase%2C CheR-type KEGG: aba:Acid345_1529 MCP methyltransferase%2C CheR- type~PFAM: MCP methyltransferase CheR-type%3B Methyltransferase type 12~SMART: MCP methyltransferase CheR-type gene gene2366 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2320 Amir_2321 Amir_2321 Amir_2321 2578641 2579825 - response regulator receiver modulated CheB methylesterase KEGG: mmr:Mmar10_0661 chemotaxis-specific methylesterase~PFAM: CheB methylesterase%3B response regulator receiver~SMART: response regulator receiver gene gene2367 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2321 Amir_2322 Amir_2322 Amir_2322 2580177 2581037 - hypothetical protein gene gene2368 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2322 Amir_2323 Amir_2323 Amir_2323 2581156 2582793 - methyl-accepting chemotaxis sensory transducer PFAM: chemotaxis sensory transducer%3B histidine kinase HAMP region domain protein~SMART: chemotaxis sensory transducer%3B histidine kinase HAMP region domain protein~KEGG: aba:Acid345_1526 methyl-accepting chemotaxis sensory transducer gene gene2369 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2323 Amir_2324 Amir_2324 Amir_2324 2582970 2583404 - CheW protein PFAM: CheW domain protein~SMART: CheW domain protein~KEGG: aba:Acid345_1525 CheW protein gene gene2370 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2324 Amir_2325 Amir_2325 Amir_2325 2583407 2585689 - CheA signal transduction histidine kinase PFAM: CheW domain protein%3B Signal transducing histidine kinase homodimeric%3B Hpt domain protein%3B ATP- binding region ATPase domain protein~SMART: CheW domain protein%3B ATP-binding region ATPase domain protein%3B Hpt domain protein~KEGG: aba:Acid345_1524 CheA signal transduction histidine kinases gene gene2371 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2325 Amir_2326 Amir_2326 Amir_2326 2586401 2586616 - hypothetical protein gene gene2372 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2326 Amir_2327 Amir_2327 Amir_2327 2586841 2587329 + hypothetical protein KEGG: bxe:Bxe_B0776 putative membrane glycoprotein gene gene2373 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2327 Amir_2328 Amir_2328 Amir_2328 2587723 2588814 - type III secretion exporter PFAM: type III secretion exporter~KEGG: cti:RALTA_B0268 FlhB: flagellar biosynthetic protein. FlhB/HrpN/YscU/SpaS family. gene gene2374 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2328 Amir_2329 Amir_2329 Amir_2329 2588822 2589592 - type III secretion system inner membrane R protein PFAM: type III secretion system inner membrane R protein~KEGG: tbd:Tbd_1612 flagellar biosynthesis protein FliR gene gene2375 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2329 Amir_2330 Amir_2330 Amir_2330 2589601 2589873 - export protein FliQ family 3 PFAM: export protein FliQ family 3~KEGG: tgr:Tgr7_1332 flagellar biosynthetic protein FliQ gene gene2376 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2330 Amir_2331 Amir_2331 Amir_2331 2589885 2590766 - flagellar biosynthetic protein FliP KEGG: gme:Gmet_3097 flagellar biosynthesis protein FliP~TIGRFAM: flagellar biosynthetic protein FliP~PFAM: type III secretion system inner membrane P protein gene gene2377 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2331 Amir_2332 Amir_2332 Amir_2332 2590763 2591719 - hypothetical protein KEGG: hypothetical protein gene gene2378 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2332 Amir_2333 Amir_2333 Amir_2333 2591719 2592471 - flagellar motor switch protein FliN TIGRFAM: flagellar motor switch protein FliN~PFAM: surface presentation of antigens (SPOA) protein~KEGG: bvi:Bcep1808_0049 flagellar motor switch protein FliN gene gene2379 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2333 Amir_2334 Amir_2334 Amir_2334 2592468 2593430 - flagellar motor switch protein FliM PFAM: flagellar motor switch protein FliM%3B surface presentation of antigens (SPOA) protein~KEGG: hhe:HH1147 flagellar motor switch protein FliM gene gene2380 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2334 Amir_2335 Amir_2335 Amir_2335 2593641 2594090 - flagellar basal body-associated protein FliL PFAM: flagellar basal body-associated protein FliL~KEGG: rso:RSp0379 flagellar basal body-associated protein FliL gene gene2381 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2335 Amir_2336 Amir_2336 Amir_2336 2594116 2595003 - OmpA/MotB domain protein PFAM: OmpA/MotB domain protein~KEGG: ppd:Ppro_3470 OmpA/MotB domain-containing protein gene gene2382 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2336 Amir_2337 Amir_2337 Amir_2337 2595003 2595776 - MotA/TolQ/ExbB proton channel PFAM: MotA/TolQ/ExbB proton channel~KEGG: glo:Glov_0031 MotA/TolQ/ExbB proton channel gene gene2383 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2337 Amir_2338 Amir_2338 Amir_2338 2595777 2596082 - flagellar FlbD family protein PFAM: flagellar FlbD family protein~KEGG: bha:BH2448 hypothetical protein gene gene2384 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2338 Amir_2339 Amir_2339 Amir_2339 2596215 2597045 - protein of unknown function DUF1078 domain protein PFAM: protein of unknown function DUF1078 domain protein%3B flagellar basal body rod protein~KEGG: bha:BH2449 flagellar basal body rod protein FlgG gene gene2385 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2339 Amir_2340 Amir_2340 Amir_2340 2597106 2597525 - flagellar hook capping protein PFAM: flagellar hook capping protein~KEGG: rpe:RPE_1177 flagellar basal body rod modification protein gene gene2386 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2340 Amir_2341 Amir_2341 Amir_2341 2597554 2599590 - flagellar hook-length control protein PFAM: flagellar hook-length control protein~KEGG: SNF2 superfamily protein gene gene2387 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2341 Amir_2342 Amir_2342 Amir_2342 2599591 2600574 - Lytic transglycosylase catalytic PFAM: Lytic transglycosylase catalytic%3B NLP/P60 protein~KEGG: bsu:BSU11570 hypothetical protein gene gene2388 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2342 Amir_2343 Amir_2343 Amir_2343 2600571 2600999 - TolA family protein KEGG: bra:BRADO2721 TolA family protein gene gene2389 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2343 Amir_2344 Amir_2344 Amir_2344 2600996 2602315 - ATPase%2C FliI/YscN family KEGG: afw:Anae109_2216 FliI/YscN family ATPase~TIGRFAM: ATPase%2C FliI/YscN family~PFAM: H+transporting two-sector ATPase alpha/beta subunit central region%3B H+transporting two-sector ATPase alpha/beta subunit domain protein~SMART: AAA ATPase gene gene2390 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2344 Amir_2345 Amir_2345 Amir_2345 2602312 2602992 - flagellar assembly protein FliH PFAM: flagellar assembly protein FliH~KEGG: azo:azo2718 flagellar assembly protein FliH gene gene2391 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2345 Amir_2346 Amir_2346 Amir_2346 2602973 2603989 - flagellar motor switch protein FliG TIGRFAM: flagellar motor switch protein FliG~PFAM: flagellar motor switch protein FliG~KEGG: bha:BH2457 flagellar motor switch protein G gene gene2392 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2346 Amir_2347 Amir_2347 Amir_2347 2603991 2605670 - flagellar M-ring protein FliF TIGRFAM: flagellar M-ring protein FliF~PFAM: secretory protein YscJ/FliF family protein%3B Flagellar M-ring domain protein~KEGG: gbm:Gbem_3838 flagellar M-ring protein FliF gene gene2393 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2347 Amir_2348 Amir_2348 Amir_2348 2605667 2605984 - flagellar hook-basal body complex protein FliE PFAM: flagellar hook-basal body complex protein FliE~KEGG: pca:Pcar_1193 flagellar hook-basal body complex protein FliE gene gene2394 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2348 Amir_2349 Amir_2349 Amir_2349 2605981 2606379 - protein of unknown function DUF1078 domain protein PFAM: protein of unknown function DUF1078 domain protein~KEGG: efe:EFER_1855 flagellar component of cell- proximal portion of basal-body rod gene gene2395 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2349 Amir_2350 Amir_2350 Amir_2350 2606381 2606737 - flagellar basal-body rod protein FlgB TIGRFAM: flagellar basal-body rod protein FlgB~KEGG: eta:ETA_20410 flagellar basal-body rod protein gene gene2396 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2350 Amir_2351 Amir_2351 Amir_2351 2607284 2607619 - hypothetical protein gene gene2397 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2351 Amir_2352 Amir_2352 Amir_2352 2607616 2608014 - flagellar protein FliS TIGRFAM: flagellar protein FliS~PFAM: flagellar protein FliS~KEGG: pca:Pcar_1111 flagellar protein FliS gene gene2398 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2352 Amir_2353 Amir_2353 Amir_2353 2608022 2609314 - flagellar hook-associated 2 domain protein PFAM: flagellar hook-associated 2 domain protein%3B flagellin hook IN repeat protein%3B flagellar hook- associated protein 2 domain protein~KEGG: xcb:XC_2246 flagellar protein gene gene2399 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2353 Amir_2354 Amir_2354 Amir_2354 2609457 2610617 - flagellin domain protein PFAM: flagellin domain protein~KEGG: nmu:Nmul_A1337 flagellin-like gene gene2400 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2354 Amir_2355 Amir_2355 Amir_2355 2611185 2612069 - RNA polymerase%2C sigma 28 subunit%2C FliA/WhiG subfamily TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family~PFAM: sigma-70 region 4 domain protein%3B sigma-70 region 2 domain protein%3B Sigma-70 region 4 type 2%3B sigma- 70 region 3 domain protein~KEGG: gbm:Gbem_3764 RNA polymerase%2C sigma 28 subunit%2C FliA/WhiG gene gene2401 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2355 Amir_2356 Amir_2356 Amir_2356 2612305 2612787 + FlgN family protein PFAM: FlgN family protein~KEGG: gur:Gura_4100 hypothetical protein gene gene2402 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2356 Amir_2357 Amir_2357 Amir_2357 2612790 2614169 + flagellar hook-associated protein FlgK TIGRFAM: flagellar hook-associated protein FlgK~PFAM: protein of unknown function DUF1078 domain protein%3B flagellar basal body rod protein~KEGG: ppd:Ppro_3455 flagellar hook-associated protein FlgK gene gene2403 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2357 Amir_2358 Amir_2358 Amir_2358 2614176 2615054 + flagellar hook-associated protein 3 TIGRFAM: flagellar hook-associated protein 3~PFAM: flagellin domain protein~KEGG: gur:Gura_4098 flagellar hook-associated protein 3 gene gene2404 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2358 Amir_2359 Amir_2359 Amir_2359 2615051 2615563 + protein of unknown function DUF180 PFAM: protein of unknown function DUF180~KEGG: dps:DP2692 flagellar assembly protein FliW gene gene2405 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2359 Amir_2360 Amir_2360 Amir_2360 2615517 2615777 + carbon storage regulator%2C CsrA TIGRFAM: carbon storage regulator~PFAM: carbon storage regulator~KEGG: mca:MCA0391 carbon storage regulator gene gene2406 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2360 Amir_2361 Amir_2361 Amir_2361 2616167 2617858 + peptidase S8 and S53 subtilisin kexin sedolisin PFAM: peptidase S8 and S53 subtilisin kexin sedolisin%3B Proprotein convertase P~KEGG: mca:MCA0875 serine protease gene gene2407 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2361 Amir_2362 Amir_2362 Amir_2362 2617931 2619571 + PAS/PAC sensor hybrid histidine kinase KEGG: sus:Acid_3859 PAS/PAC sensor hybrid histidine kinase~TIGRFAM: PAS sensor protein~PFAM: ATP-binding region ATPase domain protein%3B response regulator receiver%3B PAS fold domain protein~SMART: ATP-binding region ATPase domain protein%3B response regulator receiver%3B PAS domain containing protein gene gene2408 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2362 Amir_2363 Amir_2363 Amir_2363 2619568 2619948 + response regulator receiver protein PFAM: response regulator receiver~SMART: response regulator receiver~KEGG: rce:RC1_0432 KDP operon transcriptional regulatory protein KdpE gene gene2409 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2363 Amir_2364 Amir_2364 Amir_2364 2620431 2621354 - NmrA family protein PFAM: NmrA family protein~KEGG: sus:Acid_6298 NmrA family protein gene gene2410 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2364 Amir_2365 Amir_2365 Amir_2365 2621432 2621875 - transcriptional regulator%2C MarR family PFAM: regulatory protein MarR~SMART: regulatory protein MarR~KEGG: mxa:MXAN_6486 transcriptional regulator%2C MarR family gene gene2411 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2365 Amir_2366 Amir_2366 Amir_2366 2622036 2624204 - PAS/PAC sensor signal transduction histidine kinase KEGG: bmj:BMULJ_06047 signal transduction histidine kinase~TIGRFAM: PAS sensor protein~PFAM: histidine kinase A domain protein%3B ATP- binding region ATPase domain protein%3B PAS fold domain protein%3B PAS fold-4 domain protein~SMART: histidine kinase A domain protein%3B PAS domain containing protein gene gene2412 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2366 Amir_2367 Amir_2367 Amir_2367 2624616 2626895 + PAS/PAC sensor signal transduction histidine kinase KEGG: mag:amb2954 signal transduction histidine kinase~TIGRFAM: PAS sensor protein~PFAM: ATP-binding region ATPase domain protein%3B PAS fold-4 domain protein%3B PAS fold domain protein~SMART: ATP-binding region ATPase domain protein%3B PAS domain containing protein gene gene2413 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2367 Amir_2368 Amir_2368 Amir_2368 2626892 2628103 + putative signal transduction protein PFAM: Metal-dependent hydrolase HDOD%3B response regulator receiver~SMART: response regulator receiver~KEGG: dvu:DVU0330 response regulator gene gene2414 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2368 Amir_2369 Amir_2369 Amir_2369 2628258 2628422 - hypothetical protein KEGG: hypothetical protein gene gene2415 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2369 Amir_2370 Amir_2370 Amir_2370 2628647 2632948 + multi-sensor hybrid histidine kinase KEGG: dal:Dalk_3918 multi-sensor hybrid histidine kinase~TIGRFAM: PAS sensor protein~PFAM: ATP-binding region ATPase domain protein%3B response regulator receiver%3B Hpt domain protein%3B PAS fold- 4 domain protein%3B PAS fold domain protein%3B histidine kinase A domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B response regulator receiver%3B PAS domain containing protein gene gene2416 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2370 Amir_2371 Amir_2371 Amir_2371 2633170 2634318 + response regulator receiver protein PFAM: response regulator receiver~SMART: response regulator receiver~KEGG: sat:SYN_01373 hydrogenase transcriptional regulatory protein gene gene2417 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2371 Amir_2372 Amir_2372 Amir_2372 2634367 2635044 - transcriptional regulator%2C GntR family PFAM: GntR domain protein%3B regulatory protein GntR HTH~SMART: regulatory protein GntR HTH~KEGG: pol:Bpro_0417 transcriptional regulator%2C GntR family gene gene2418 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2372 Amir_2373 Amir_2373 Amir_2373 2635467 2636114 + hypothetical protein gene gene2419 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2373 Amir_2374 Amir_2374 Amir_2374 2636206 2636730 + CHRD domain containing protein PFAM: CHRD domain containing protein~SMART: CHRD domain containing protein~KEGG: pzu:PHZ_c0812 hypothetical protein gene gene2420 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2374 Amir_2375 Amir_2375 Amir_2375 2636829 2637188 - conserved hypothetical protein KEGG: bja:blr0122 hypothetical protein gene gene2421 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2375 Amir_2376 Amir_2376 Amir_2376 2637274 2637786 + transcriptional regulator%2C MarR family PFAM: regulatory protein MarR~SMART: regulatory protein MarR~KEGG: efe:EFER_2801 putative MarR-family regulatory protein gene gene2422 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2376 Amir_2377 Amir_2377 Amir_2377 2637971 2638822 - transcriptional regulator%2C XRE family PFAM: helix-turn-helix domain protein~SMART: helix-turn-helix domain protein~KEGG: acr:Acry_0313 XRE family transcriptional regulator gene gene2423 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2377 Amir_2378 Amir_2378 Amir_2378 2638942 2639841 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: hypothetical protein gene gene2424 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2378 Amir_2379 Amir_2379 Amir_2379 2639910 2640227 + conserved hypothetical protein KEGG: hypothetical protein gene gene2425 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2379 Amir_2380 Amir_2380 Amir_2380 2640465 2642477 + PAS/PAC sensor signal transduction histidine kinase KEGG: pen:PSEEN0086 alginate biosynthesis sensor protein KinB~TIGRFAM: PAS sensor protein~PFAM: ATP-binding region ATPase domain protein%3B PAS fold-4 domain protein%3B MASE1 domain protein%3B histidine kinase A domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein gene gene2426 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2380 Amir_2381 Amir_2381 Amir_2381 2642971 2643297 - branched-chain amino acid transport PFAM: branched-chain amino acid transport~KEGG: pin:Ping_3723 branched-chain amino acid transport gene gene2427 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2381 Amir_2382 Amir_2382 Amir_2382 2643290 2643949 - AzlC family protein PFAM: AzlC family protein~KEGG: sbl:Sbal_4248 AzlC family protein gene gene2428 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2382 Amir_2383 Amir_2383 Amir_2383 2644102 2644560 + transcriptional regulator%2C AsnC family PFAM: regulatory protein AsnC/Lrp family~SMART: regulatory protein AsnC/Lrp family~KEGG: spe:Spro_3514 AsnC family transcriptional regulator gene gene2429 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2383 Amir_2384 Amir_2384 Amir_2384 2644572 2645897 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: bja:blr5567 hypothetical protein gene gene2430 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2384 Amir_2385 Amir_2385 Amir_2385 2646047 2646577 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: mlo:mlr3465 TetR family transcriptional regulator gene gene2431 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2385 Amir_2386 Amir_2386 Amir_2386 2646701 2647252 - hypothetical protein gene gene2432 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2386 Amir_2387 Amir_2387 Amir_2387 2647423 2647839 - RbsD or FucU transport PFAM: RbsD or FucU transport~KEGG: csa:Csal_0367 RbsD or FucU transport gene gene2433 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2387 Amir_2388 Amir_2388 Amir_2388 2648184 2648804 + hypothetical protein KEGG: predicted gene%2C 672682 gene gene2434 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2388 Amir_2389 Amir_2389 Amir_2389 2648876 2649811 - helix-turn-helix domain protein SMART: helix-turn-helix domain protein~KEGG: bac:BamMC406_3547 XRE family transcriptional regulator gene gene2435 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2389 Amir_2390 Amir_2390 Amir_2390 2649898 2650608 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B KR domain protein%3B NAD-dependent epimerase/dehydratase~KEGG: bpy:Bphyt_6333 short-chain dehydrogenase/reductase SDR gene gene2436 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2390 Amir_2391 Amir_2391 Amir_2391 2650679 2651008 - hypothetical protein gene gene2437 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2391 Amir_2392 Amir_2392 Amir_2392 2651158 2653098 - heat shock protein Hsp90 PFAM: heat shock protein Hsp90%3B ATP-binding region ATPase domain protein~SMART: ATP-binding region ATPase domain protein~KEGG: gsu:GSU2390 heat shock protein 90 gene gene2438 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2392 Amir_2393 Amir_2393 Amir_2393 2653747 2654220 + hypothetical protein KEGG: rpi:Rpic_3955 transcriptional regulator%2C MarR family gene gene2439 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2393 Amir_2394 Amir_2394 Amir_2394 2654409 2655014 - hypothetical protein gene gene2440 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2394 Amir_2395 Amir_2395 Amir_2395 2655266 2656051 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B NAD- dependent epimerase/dehydratase~KEGG: pde:Pden_1769 3-oxoacyl-(acyl-carrier- protein) reductase gene gene2441 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2395 Amir_2396 Amir_2396 Amir_2396 2656107 2656499 - hypothetical protein gene gene2442 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2396 Amir_2397 Amir_2397 Amir_2397 2657193 2658218 - Luciferase-like monooxygenase PFAM: Luciferase-like monooxygenase~KEGG: oxidoreductase protein gene gene2443 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2397 Amir_2398 Amir_2398 Amir_2398 2658282 2658647 - RNA-binding S4 domain protein PFAM: RNA-binding S4 domain protein~SMART: RNA-binding S4 domain protein~KEGG: tcx:Tcr_0016 RNA-binding S4 gene gene2444 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2398 Amir_2399 Amir_2399 Amir_2399 2658806 2659078 + hypothetical protein KEGG: gbm:Gbem_1481 transglycosylase-associated protein gene gene2445 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2399 Amir_2400 Amir_2400 Amir_2400 2659363 2660220 + Luciferase-like monooxygenase PFAM: Luciferase-like monooxygenase~KEGG: swi:Swit_2098 luciferase family protein gene gene2446 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2400 Amir_2401 Amir_2401 Amir_2401 2660361 2661191 + Siderophore-interacting protein PFAM: Siderophore-interacting protein%3B FAD-binding 9 siderophore-interacting domain protein~KEGG: smt:Smal_2998 FAD-binding 9 siderophore- interacting domain protein gene gene2447 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2401 Amir_2402 Amir_2402 Amir_2402 2661365 2661991 + hypothetical protein KEGG: pde:Pden_0727 MotA/TolQ/ExbB proton channel gene gene2448 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2402 Amir_2403 Amir_2403 Amir_2403 2661981 2663120 - transcriptional regulator%2C LacI family KEGG: aha:AHA_2314 LacI family transcription regulator~PFAM: periplasmic binding protein/LacI transcriptional regulator%3B regulatory protein LacI~SMART: regulatory protein LacI gene gene2449 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2403 Amir_2404 Amir_2404 Amir_2404 2663250 2664524 + extracellular solute-binding protein family 1 PFAM: extracellular solute-binding protein family 1~KEGG: mmw:Mmwyl1_2762 extracellular solute-binding protein gene gene2450 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2404 Amir_2405 Amir_2405 Amir_2405 2664524 2665408 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: sugar ABC transporter%3B K02025 multiple sugar transport system permease protein gene gene2451 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2405 Amir_2406 Amir_2406 Amir_2406 2665408 2666238 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: rle:RL2327 putative transmembrane component of ABC transporter gene gene2452 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2406 Amir_2407 Amir_2407 Amir_2407 2666269 2666958 - hypothetical protein KEGG: GK24108 gene product from transcript GK24108- RA gene gene2453 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2407 Amir_2408 Amir_2408 Amir_2408 2666955 2667653 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ccs:CCNA_03389 lantibiotic transport ATP- binding protein gene gene2454 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2408 Amir_2409 Amir_2409 Amir_2409 2667688 2668353 - two component transcriptional regulator%2C LuxR family PFAM: response regulator receiver%3B regulatory protein LuxR~SMART: response regulator receiver%3B regulatory protein LuxR~KEGG: scl:sce5431 two-component system response regulator gene gene2455 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2409 Amir_2410 Amir_2410 Amir_2410 2668343 2669374 - histidine kinase PFAM: histidine kinase dimerization and phosphoacceptor region%3B ATP-binding region ATPase domain protein~KEGG: scl:sce5432 putative two-component system sensor kinase gene gene2456 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2410 Amir_2411 Amir_2411 Amir_2411 2669404 2669805 - hypothetical protein gene gene2457 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2411 Amir_2412 Amir_2412 Amir_2412 2669919 2670635 - hypothetical protein KEGG: bpy:Bphyt_5600 nitroreductase gene gene2458 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2412 Amir_2413 Amir_2413 Amir_2413 2670845 2671405 + hypothetical protein KEGG: hypothetical protein gene gene2459 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2413 Amir_2414 Amir_2414 Amir_2414 2671787 2672764 - nitroreductase PFAM: nitroreductase~KEGG: rce:RC1_3281 hypothetical protein gene gene2460 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2414 Amir_2415 Amir_2415 Amir_2415 2672942 2673529 + hypothetical protein gene gene2461 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2415 Amir_2416 Amir_2416 Amir_2416 2673623 2674456 + UspA domain protein PFAM: UspA domain protein~KEGG: hha:Hhal_2190 UspA domain protein gene gene2462 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2416 Amir_2417 Amir_2417 Amir_2417 2674578 2675423 - pyruvate formate-lyase activating enzyme KEGG: zmo:ZMO1569 pyruvate-formate lyase activating enzyme~TIGRFAM: pyruvate formate-lyase activating enzyme~PFAM: Radical SAM domain protein gene gene2463 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2417 Amir_2418 Amir_2418 Amir_2418 2675503 2677761 - formate acetyltransferase KEGG: rru:Rru_A3000 formate acetyltransferase~TIGRFAM: formate acetyltransferase~PFAM: pyruvate formate-lyase PFL%3B formate C- acetyltransferase glycine radical gene gene2464 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2418 Amir_2419 Amir_2419 Amir_2419 2678072 2680069 - hypothetical protein KEGG: ade:Adeh_0129 methyltransferase type 11 gene gene2465 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2419 Amir_2420 Amir_2420 Amir_2420 2680236 2680628 - hypothetical protein gene gene2466 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2420 Amir_2421 Amir_2421 Amir_2421 2680859 2690980 + conserved repeat domain protein TIGRFAM: conserved repeat domain protein~PFAM: Cna B domain protein%3B protein of unknown function DUF11~KEGG: colA%3B Cna B-type domain-containing protein gene gene2467 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2421 Amir_2422 Amir_2422 Amir_2422 2691116 2691808 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: rso:RS05498 putative transcription regulator protein gene gene2468 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2422 Amir_2423 Amir_2423 Amir_2423 2691969 2692757 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: scl:sce6363 short chain dehydrogenase gene gene2469 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2423 Amir_2424 Amir_2424 Amir_2424 2692908 2693117 + hypothetical protein gene gene2470 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2424 Amir_2425 Amir_2425 Amir_2425 2693123 2694754 - Cholesterol oxidase KEGG: prw:PsycPRwf_0069 cholesterol oxidase gene gene2471 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2425 Amir_2426 Amir_2426 Amir_2426 2694882 2695691 - Ion transport protein PFAM: Ion transport protein~KEGG: tmz:Tmz1t_1575 ion transport protein gene gene2472 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2426 Amir_2427 Amir_2427 Amir_2427 2696045 2696848 + alpha/beta hydrolase fold protein PFAM: alpha/beta hydrolase fold~KEGG: rlt:Rleg2_6302 alpha/beta hydrolase fold gene gene2473 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2427 Amir_2428 Amir_2428 Amir_2428 2696845 2698212 + FAD linked oxidase domain protein PFAM: FAD linked oxidase domain protein~KEGG: scl:sce0752 putative glycolate oxidase gene gene2474 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2428 Amir_2429 Amir_2429 Amir_2429 2698252 2698437 - protein of unknown function DUF397 PFAM: protein of unknown function DUF397 gene gene2475 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2429 Amir_2430 Amir_2430 Amir_2430 2698440 2699270 - transcriptional regulator%2C XRE family PFAM: helix-turn-helix domain protein~SMART: helix-turn-helix domain protein~KEGG: rlt:Rleg2_3945 transcriptional regulator%2C XRE family gene gene2476 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2430 Amir_2431 Amir_2431 Amir_2431 2699524 2699967 + hypothetical protein KEGG: hypothetical protein gene gene2477 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2431 Amir_2432 Amir_2432 Amir_2432 2699992 2700807 - hypothetical protein gene gene2478 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2432 Amir_2433 Amir_2433 Amir_2433 2701011 2701178 + hypothetical protein gene gene2479 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2433 Amir_2434 Amir_2434 Amir_2434 2701231 2702121 - TM1410 hypothetical-related protein PFAM: TM1410 hypothetical-related protein~KEGG: nmu:Nmul_A2438 hypothetical protein gene gene2480 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2434 Amir_2435 Amir_2435 Amir_2435 2702403 2703164 - transcriptional regulator%2C DeoR family PFAM: regulatory protein DeoR~SMART: regulatory protein DeoR~KEGG: aba:Acid345_0656 transcriptional regulator%2C DeoR family gene gene2481 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2435 Amir_2436 Amir_2436 Amir_2436 2703327 2704814 + sodium/hydrogen exchanger PFAM: sodium/hydrogen exchanger~KEGG: mrd:Mrad2831_1143 Na+/H+ antiporter gene gene2482 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2436 Amir_2437 Amir_2437 Amir_2437 2704818 2708651 - conserved hypothetical protein KEGG: rru:Rru_A1270 hypothetical protein gene gene2483 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2437 Amir_2438 Amir_2438 Amir_2438 2708651 2709868 - metallophosphoesterase PFAM: metallophosphoesterase~KEGG: scl:sce7166 DNA repair exonuclease family protein gene gene2484 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2438 Amir_2439 Amir_2439 Amir_2439 2710155 2711507 + chromosome segregation ATPase KEGG: ade:Adeh_1847 chromosome segregation ATPase gene gene2485 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2439 Amir_2440 Amir_2440 Amir_2440 2711510 2712070 + hypothetical protein gene gene2486 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2440 Amir_2441 Amir_2441 Amir_2441 2712111 2712938 - transcriptional regulator%2C XRE family SMART: helix-turn-helix domain protein~KEGG: bja:bll4873 hypothetical protein gene gene2487 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2441 Amir_2442 Amir_2442 Amir_2442 2713056 2713859 + Siderophore-interacting protein PFAM: Siderophore-interacting protein%3B FAD-binding 9 siderophore-interacting domain protein~KEGG: jan:Jann_2126 FAD-binding 9%2C siderophore- interacting gene gene2488 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2442 Amir_2443 Amir_2443 Amir_2443 2713910 2714599 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: rpb:RPB_4514 TetR family transcriptional regulator gene gene2489 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2443 Amir_2444 Amir_2444 Amir_2444 2714725 2715663 + Alcohol dehydrogenase GroES domain protein PFAM: Alcohol dehydrogenase GroES domain protein%3B Alcohol dehydrogenase zinc-binding domain protein~KEGG: ccs:CCNA_02438 quinone oxidoreductase gene gene2490 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2444 Amir_2445 Amir_2445 Amir_2445 2716193 2717641 + cytochrome P450-like protein KEGG: scl:sce8913 cytochrome P450 CYP109C2 gene gene2491 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2445 Amir_2446 Amir_2446 Amir_2446 2717664 2718590 - transcriptional regulator%2C LysR family PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: pmy:Pmen_4546 LysR family transcriptional regulator gene gene2492 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2446 Amir_2447 Amir_2447 Amir_2447 2718664 2719629 + protein of unknown function DUF6 transmembrane PFAM: protein of unknown function DUF6 transmembrane~KEGG: dvm:DvMF_1193 protein of unknown function DUF6 transmembrane gene gene2493 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2447 Amir_2448 Amir_2448 Amir_2448 2719922 2720512 + protein of unknown function UPF0016 PFAM: protein of unknown function UPF0016~KEGG: sat:SYN_01349 hypothetical protein gene gene2494 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2448 Amir_2449 Amir_2449 Amir_2449 2720610 2720960 - hypothetical protein gene gene2495 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2449 Amir_2450 Amir_2450 Amir_2450 2720974 2721219 - hypothetical protein KEGG: mag:amb4032 hypothetical protein gene gene2496 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2450 Amir_2451 Amir_2451 Amir_2451 2721804 2722385 + hypothetical protein gene gene2497 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2451 Amir_2452 Amir_2452 Amir_2452 2722414 2722833 + hypothetical protein gene gene2498 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2452 Amir_2453 Amir_2453 Amir_2453 2722916 2723215 - conserved hypothetical protein KEGG: gbm:Gbem_1185 hypothetical protein gene gene2499 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2453 Amir_2454 Amir_2454 Amir_2454 2723427 2723933 - transcriptional regulator%2C MarR family PFAM: regulatory protein MarR%3B transcriptional regulator PadR family protein~SMART: regulatory protein MarR~KEGG: atc:AGR_C_466 hypothetical protein gene gene2500 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2454 Amir_2455 Amir_2455 Amir_2455 2723976 2725064 + protein of unknown function DUF6 transmembrane PFAM: protein of unknown function DUF6 transmembrane~KEGG: reh:H16_A0077 predicted PecM protein gene gene2501 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2455 Amir_2456 Amir_2456 Amir_2456 2724904 2726604 - ABC transporter related PFAM: ABC transporter related%3B Oligopeptide/dipeptide ABC transporter domain protein~SMART: AAA ATPase~KEGG: rsq:Rsph17025_3273 acetamidase/formamidase gene gene2502 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2456 Amir_2457 Amir_2457 Amir_2457 2726601 2728289 - extracellular solute-binding protein family 5 PFAM: extracellular solute-binding protein family 5~KEGG: gbe:GbCGDNIH1_0125 amide-UreA binding protein gene gene2503 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2457 Amir_2458 Amir_2458 Amir_2458 2728410 2729405 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: rsh:Rsph17029_4148 binding-protein-dependent transport systems inner membrane component gene gene2504 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2458 Amir_2459 Amir_2459 Amir_2459 2729405 2730331 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: pca:Pcar_1867 ABC-type transport system protein gene gene2505 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2459 Amir_2460 Amir_2460 Amir_2460 2730551 2730916 + transcriptional regulator%2C HxlR family PFAM: helix-turn-helix HxlR type~KEGG: transcriptional regulator%2C HxlR family gene gene2506 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2460 Amir_2461 Amir_2461 Amir_2461 2731034 2731993 + Alcohol dehydrogenase GroES domain protein PFAM: Alcohol dehydrogenase GroES domain protein%3B Alcohol dehydrogenase zinc-binding domain protein~KEGG: ank:AnaeK_3358 alcohol dehydrogenase zinc- binding domain protein gene gene2507 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2461 Amir_2462 Amir_2462 Amir_2462 2732004 2732276 + hypothetical protein gene gene2508 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2462 Amir_2463 Amir_2463 Amir_2463 2732315 2733151 + hypothetical protein gene gene2509 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2463 Amir_2464 Amir_2464 Amir_2464 2733130 2733819 - two component transcriptional regulator%2C winged helix family PFAM: response regulator receiver%3B transcriptional regulator domain protein~SMART: response regulator receiver~KEGG: rce:RC1_3267 phosphate regulon transcriptional regulatory protein PhoB gene gene2510 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2464 Amir_2465 Amir_2465 Amir_2465 2734048 2735841 + histidine kinase PFAM: histidine kinase A domain protein%3B ATP- binding region ATPase domain protein~SMART: histidine kinase A domain protein%3B ATP- binding region ATPase domain protein~KEGG: scl:sce2655 two-component hybrid sensor and regulator gene gene2511 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2465 Amir_2466 Amir_2466 Amir_2466 2735872 2736234 + anti-sigma-factor antagonist TIGRFAM: anti-anti-sigma factor~PFAM: Sulfate transporter/antisigma-factor antagonist STAS~KEGG: sat:SYN_02356 anti-sigma F factor antagonist gene gene2512 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2466 Amir_2467 Amir_2467 Amir_2467 2737302 2740496 - glycoside hydrolase family 2 sugar binding PFAM: glycoside hydrolase family 2 sugar binding%3B PA14 domain protein%3B glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich~SMART: PA14 domain protein%3B LamG domain protein jellyroll fold domain protein~KEGG: sus:Acid_6668 glycoside hydrolase family protein gene gene2513 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2467 Amir_2468 Amir_2468 Amir_2468 2740664 2741857 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: maq:Maqu_2048 major facilitator superfamily transporter gene gene2514 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2468 Amir_2469 Amir_2469 Amir_2469 2741857 2742531 - transcriptional regulator%2C GntR family PFAM: GntR domain protein%3B regulatory protein GntR HTH~SMART: regulatory protein GntR HTH~KEGG: met:M446_5037 GntR family transcriptional regulator gene gene2515 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2469 Amir_2470 Amir_2470 Amir_2470 2742765 2743412 + hypothetical protein KEGG: GF15944 gene product from transcript GF15944- RA gene gene2516 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2470 Amir_2471 Amir_2471 Amir_2471 2743541 2744023 + hypothetical protein gene gene2517 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2471 Amir_2472 Amir_2472 Amir_2472 2744408 2744785 + anti-sigma-factor antagonist TIGRFAM: anti-anti-sigma factor~PFAM: Sulfate transporter/antisigma-factor antagonist STAS~KEGG: dvl:Dvul_2983 anti-sigma-factor antagonist gene gene2518 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2472 Amir_2473 Amir_2473 Amir_2473 2744793 2745863 + peptidase M20 PFAM: peptidase M20%3B peptidase dimerization domain protein~KEGG: dvl:Dvul_0672 peptidase M20 gene gene2519 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2473 Amir_2474 Amir_2474 Amir_2474 2745993 2746391 + hypothetical protein KEGG: afw:Anae109_0106 integral membrane sensor signal transduction histidine kinase gene gene2520 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2474 Amir_2475 Amir_2475 Amir_2475 2746697 2747368 + chitin-binding domain 3 protein PFAM: chitin-binding domain 3 protein~KEGG: sml:Smlt4515 putative cellulose/chitin- binding protein gene gene2521 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2475 Amir_2476 Amir_2476 Amir_2476 2747665 2748669 + Integral membrane protein TerC PFAM: Integral membrane protein TerC~KEGG: csa:Csal_1104 integral membrane protein TerC gene gene2522 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2476 Amir_2477 Amir_2477 Amir_2477 2748907 2749524 + isochorismatase hydrolase PFAM: isochorismatase hydrolase~KEGG: bid:Bind_1386 isochorismatase hydrolase gene gene2523 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2477 Amir_2478 Amir_2478 Amir_2478 2749604 2750794 + Peptidoglycan-binding domain 1 protein PFAM: Peptidoglycan-binding domain 1 protein~KEGG: mes:Meso_0085 peptidoglycan-binding domain 1 gene gene2524 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2478 Amir_2479 Amir_2479 Amir_2479 2751287 2751550 + hypothetical protein gene gene2525 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2479 Amir_2480 Amir_2480 Amir_2480 2751597 2752313 - putative integral membrane protein KEGG: rso:RS02209 putative transmembrane protein gene gene2526 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2480 Amir_2481 Amir_2481 Amir_2481 2752855 2764620 + conserved repeat domain protein TIGRFAM: conserved repeat domain protein~PFAM: protein of unknown function DUF11~KEGG: bce:BC1592 cell surface protein gene gene2527 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2481 Amir_2482 Amir_2482 Amir_2482 2764713 2765351 + hypothetical protein gene gene2528 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2482 Amir_2483 Amir_2483 Amir_2483 2766687 2768600 + hypothetical protein KEGG: similar to mucin 2%3B K10955 intestinal mucin- 2 gene gene2529 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2483 Amir_2484 Amir_2484 Amir_2484 2768704 2770383 - von Willebrand factor type A SMART: von Willebrand factor type A~KEGG: dac:Daci_0766 von Willebrand factor type A gene gene2530 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2484 Amir_2485 Amir_2485 Amir_2485 2770371 2771597 - conserved hypothetical protein KEGG: dac:Daci_0764 hypothetical protein gene gene2531 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2485 Amir_2486 Amir_2486 Amir_2486 2771601 2772374 - hypothetical protein gene gene2532 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2486 Amir_2487 Amir_2487 Amir_2487 2772405 2773538 - serine/threonine protein kinase PFAM: Serine/threonine protein kinase-related%3B tyrosine protein kinase~SMART: serine/threonine protein kinase%3B tyrosine protein kinase~KEGG: ank:AnaeK_0122 serine/threonine protein kinase gene gene2533 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2487 Amir_2488 Amir_2488 Amir_2488 2774401 2775528 + pseudogene gene2534 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2488 Amir_2489 Amir_2489 Amir_2489 2775533 2775955 - pseudogene gene2535 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2489 Amir_2490 Amir_2490 Amir_2490 2776059 2776721 + hypothetical protein KEGG: rce:RC1_0257 puromycin N-acetyltransferase%2C putative gene gene2536 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2490 Amir_2491 Amir_2491 Amir_2491 2776775 2777878 - putative cytochrome P450 KEGG: bxe:Bxe_C0945 putative cytochrome P450 gene gene2537 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2491 Amir_2492 Amir_2492 Amir_2492 2778236 2780008 + amino acid adenylation domain protein TIGRFAM: amino acid adenylation domain protein~PFAM: AMP-dependent synthetase and ligase%3B phosphopantetheine-binding~KEGG: eca:ECA1488 non-ribosomal peptide synthetase gene gene2538 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2492 Amir_2493 Amir_2493 Amir_2493 2780680 2787840 + Erythronolide synthase PFAM: Beta-ketoacyl synthase%3B Acyl transferase%3B KR domain protein%3B short-chain dehydrogenase/reductase SDR%3B 2- nitropropane dioxygenase NPD%3B phosphopantetheine-binding~KEGG: sus:Acid_1972 beta-ketoacyl synthase gene gene2539 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2493 Amir_2494 Amir_2494 Amir_2494 2787837 2792198 + Beta-ketoacyl synthase PFAM: Beta-ketoacyl synthase%3B Acyl transferase%3B 4'- phosphopantetheinyl transferase~KEGG: sus:Acid_1973 beta-ketoacyl synthase gene gene2540 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2494 Amir_2495 Amir_2495 Amir_2495 2792195 2792509 + hypothetical protein KEGG: pub:SAR11_0708 acyl carrier protein (ACP) gene gene2541 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2495 Amir_2496 Amir_2496 Amir_2496 2792506 2793339 + alpha/beta hydrolase fold protein PFAM: alpha/beta hydrolase fold~KEGG: azc:AZC_1444 beta-ketoadipate enol-lactone hydrolase protein gene gene2542 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2496 Amir_2497 Amir_2497 Amir_2497 2793336 2794478 + glycosyltransferase%2C MGT family TIGRFAM: glycosyltransferase%2C MGT family~PFAM: UDP-glucuronosyl/UDP-glucosyltransferase~KEGG: bcm:Bcenmc03_1778 glycosyl transferase family protein gene gene2543 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2497 Amir_2498 Amir_2498 Amir_2498 2794856 2796643 + ABC transporter related PFAM: ABC transporter related%3B ABC transporter transmembrane region~SMART: AAA ATPase~KEGG: rce:RC1_1837 ABC transporter%2C ATP-binding gene gene2544 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2498 Amir_2499 Amir_2499 Amir_2499 2796627 2797445 - lipolytic protein G-D-S-L family PFAM: lipolytic protein G-D-S-L family~KEGG: nar:Saro_1805 hypothetical protein gene gene2545 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2499 Amir_2500 Amir_2500 Amir_2500 2797651 2799537 + N-acetylmuramyl-L-alanine amidase%2C negative regulator of AmpC%2C AmpD PFAM: N-acetylmuramoyl-L-alanine amidase family 2~SMART: N-acetylmuramoyl-L-alanine amidase family 2~KEGG: mxa:MXAN_0345 putative N-acetylmuramoyl-L- alanine amidase gene gene2546 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2500 Amir_2501 Amir_2501 Amir_2501 2799627 2800091 + CHRD domain containing protein SMART: CHRD domain containing protein~KEGG: scl:sce5878 hypothetical protein gene gene2547 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2501 Amir_2502 Amir_2502 Amir_2502 2800252 2800797 + hypothetical protein gene gene2548 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2502 Amir_2503 Amir_2503 Amir_2503 2800895 2801263 + YCII-related protein PFAM: YCII-related~KEGG: scl:sce5148 hypothetical protein gene gene2549 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2503 Amir_2504 Amir_2504 Amir_2504 2801278 2802510 + putative RNA polymerase%2C sigma-24 subunit%2C ECF subfamily TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family~PFAM: Sigma-70 region 4 type 2%3B sigma-70 region 2 domain protein~KEGG: sus:Acid_3701 RNA polymerase ECF-subfamily sigma factor gene gene2550 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2504 Amir_2505 Amir_2505 Amir_2505 2802500 2803240 - peptidase M10A KEGG: scl:sce4774 peptidase M10A gene gene2551 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2505 Amir_2506 Amir_2506 Amir_2506 2803691 2805142 - aldehyde dehydrogenase PFAM: Aldehyde Dehydrogenase~KEGG: bcm:Bcenmc03_6120 aldehyde dehydrogenase gene gene2552 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2506 Amir_2507 Amir_2507 Amir_2507 2805587 2806441 + hypothetical protein gene gene2553 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2507 Amir_2508 Amir_2508 Amir_2508 2806438 2811342 + hypothetical protein KEGG: acp:A2cp1_3940 TPR repeat-containing protein gene gene2554 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2508 Amir_2509 Amir_2509 Amir_2509 2811339 2816237 + hypothetical protein KEGG: hypothetical protein gene gene2555 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2509 Amir_2510 Amir_2510 Amir_2510 2816234 2821168 + hypothetical protein KEGG: MUC17%3B mucin 17%2C cell surface associated gene gene2556 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2510 Amir_2511 Amir_2511 Amir_2511 2821165 2822322 + ATPase associated with various cellular activities AAA_5 PFAM: ATPase associated with various cellular activities AAA_5%3B ATPase associated with various cellular activities AAA_3~SMART: AAA ATPase~KEGG: mrd:Mrad2831_1397 ATPase gene gene2557 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2511 Amir_2512 Amir_2512 Amir_2512 2822336 2826223 + VWA containing CoxE family protein PFAM: VWA containing CoxE family protein~KEGG: ecs:ECs2930 hypothetical protein gene gene2558 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2512 Amir_2513 Amir_2513 Amir_2513 2826220 2827986 + hypothetical protein KEGG: mrd:Mrad2831_1392 zinc finger SWIM domain- containing protein gene gene2559 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2513 Amir_2514 Amir_2514 Amir_2514 2828329 2829081 + hypothetical protein gene gene2560 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2514 Amir_2515 Amir_2515 Amir_2515 2829103 2829990 - transcriptional regulator%2C AraC family PFAM: helix-turn-helix- domain containing protein AraC type~SMART: helix-turn-helix- domain containing protein AraC type~KEGG: scl:sce1222 putative AraC-like transcription regulator gene gene2561 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2515 Amir_2516 Amir_2516 Amir_2516 2830263 2830820 - DoxX family protein PFAM: DoxX family protein~KEGG: mes:Meso_2920 DoxX gene gene2562 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2516 Amir_2517 Amir_2517 Amir_2517 2831131 2833398 + Catalase PFAM: Catalase domain protein~KEGG: psa:PST_0039 hydroperoxidase II gene gene2563 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2517 Amir_2518 Amir_2518 Amir_2518 2833648 2834103 + Endoribonuclease L-PSP PFAM: Endoribonuclease L-PSP~KEGG: hypothetical protein gene gene2564 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2518 Amir_2519 Amir_2519 Amir_2519 2834125 2834976 - phenazine biosynthesis protein PhzF family TIGRFAM: phenazine biosynthesis protein PhzF family~PFAM: Phenazine biosynthesis PhzC/PhzF protein~KEGG: psb:Psyr_3359 phenazine biosynthesis PhzC/PhzF protein gene gene2565 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2519 Amir_2520 Amir_2520 Amir_2520 2835009 2835860 - Prolyl 4-hydroxylase alpha subunit SMART: Prolyl 4-hydroxylase alpha subunit~KEGG: bha:BH2933 hypothetical protein gene gene2566 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2520 Amir_2521 Amir_2521 Amir_2521 2835963 2836151 - hypothetical protein gene gene2567 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2521 Amir_2522 Amir_2522 Amir_2522 2836290 2839166 - Tetratricopeptide TPR_4 PFAM: Tetratricopeptide TPR_4~KEGG: hypothetical protein gene gene2568 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2522 Amir_2523 Amir_2523 Amir_2523 2839358 2841013 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: bph:Bphy_3357 EmrB/QacA family drug resistance transporter gene gene2569 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2523 Amir_2524 Amir_2524 Amir_2524 2841010 2841495 - transcriptional regulator%2C MarR family PFAM: regulatory protein MarR~SMART: regulatory protein MarR~KEGG: ppw:PputW619_3117 MarR family transcriptional regulator gene gene2570 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2524 Amir_2525 Amir_2525 Amir_2525 2841606 2842208 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: transcriptional regulator protein gene gene2571 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2525 Amir_2526 Amir_2526 Amir_2526 2842333 2843328 + intradiol ring-cleavage dioxygenase PFAM: intradiol ring-cleavage dioxygenase~KEGG: dac:Daci_3143 intradiol ring-cleavage dioxygenase gene gene2572 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2526 Amir_2527 Amir_2527 Amir_2527 2843960 2844370 + pseudogene gene2573 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2527 Amir_2528 Amir_2528 Amir_2528 2844590 2845471 + transcriptional regulator%2C MerR family PFAM: transcription activator effector binding%3B regulatory protein MerR~SMART: regulatory protein MerR~KEGG: bcb:BCB4264_A2545 transcriptional regulator%2C MerR family gene gene2574 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2528 Amir_2529 Amir_2529 Amir_2529 2845611 2848967 - metallophosphoesterase PFAM: metallophosphoesterase~KEGG: xcb:XC_4140 hypothetical protein gene gene2575 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2529 Amir_2530 Amir_2530 Amir_2530 2849112 2850677 + hypothetical protein KEGG: mxa:MXAN_5493 WD domain G-beta repeat protein gene gene2576 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2530 Amir_2531 Amir_2531 Amir_2531 2850763 2853039 + serine/threonine protein kinase PFAM: tyrosine protein kinase~SMART: serine/threonine protein kinase~KEGG: scl:sce5109 protein kinase gene gene2577 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2531 Amir_2532 Amir_2532 Amir_2532 2853120 2854514 + von Willebrand factor type A PFAM: von Willebrand factor type A~SMART: von Willebrand factor type A~KEGG: mpo:Mpop_1395 LPXTG-motif cell wall anchor domain protein gene gene2578 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2532 Amir_2533 Amir_2533 Amir_2533 2854511 2855647 + hypothetical protein KEGG: GK23348 gene product from transcript GK23348- RA gene gene2579 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2533 Amir_2534 Amir_2534 Amir_2534 2855727 2856941 + extracellular solute-binding protein family 1 PFAM: extracellular solute-binding protein family 1~KEGG: ret:RHE_CH00696 alpha-glucoside ABC transporter%2C substrate-binding protein gene gene2580 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2534 Amir_2535 Amir_2535 Amir_2535 2857177 2858448 + cytochrome P450 PFAM: cytochrome P450~KEGG: hypothetical protein gene gene2581 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2535 Amir_2536 Amir_2536 Amir_2536 2858482 2859270 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: bja:blr7343 short-chain dehydrogenase gene gene2582 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2536 Amir_2537 Amir_2537 Amir_2537 2859347 2860582 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: efe:EFER_2257 lactose/glucose efflux system gene gene2583 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2537 Amir_2538 Amir_2538 Amir_2538 2860636 2861100 + transcriptional regulator%2C MarR family PFAM: regulatory protein MarR~SMART: regulatory protein MarR~KEGG: mag:amb1485 transcriptional regulator gene gene2584 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2538 Amir_2539 Amir_2539 Amir_2539 2861017 2861829 - hypothetical protein KEGG: hypothetical protein LOC743833 gene gene2585 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2539 Amir_2540 Amir_2540 Amir_2540 2861875 2865831 - DEAD/DEAH box helicase domain protein PFAM: DEAD/DEAH box helicase domain protein%3B helicase domain protein%3B type III restriction protein res subunit~SMART: DEAD-like helicase%3B helicase domain protein~KEGG: ABR142Wp%3B K01529 gene gene2586 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2540 Amir_2541 Amir_2541 Amir_2541 2865926 2866402 - conserved hypothetical protein KEGG: hch:HCH_03911 hypothetical protein gene gene2587 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2541 Amir_2542 Amir_2542 Amir_2542 2866515 2866982 + transcriptional regulator%2C AsnC family PFAM: regulatory protein AsnC/Lrp family~SMART: regulatory protein AsnC/Lrp family~KEGG: aha:AHA_0491 AsnC family transcriptional regulator gene gene2588 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2542 Amir_2543 Amir_2543 Amir_2543 2866979 2867818 + conserved hypothetical protein KEGG: scl:sce1853 hypothetical protein gene gene2589 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2543 Amir_2544 Amir_2544 Amir_2544 2867902 2868957 + hypothetical protein gene gene2590 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2544 Amir_2545 Amir_2545 Amir_2545 2868954 2869808 - hypothetical protein gene gene2591 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2545 Amir_2546 Amir_2546 Amir_2546 2869873 2870685 - hypothetical protein gene gene2592 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2546 Amir_2547 Amir_2547 Amir_2547 2870880 2871998 + hypothetical protein KEGG: hypothetical protein gene gene2593 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2547 Amir_2548 Amir_2548 Amir_2548 2872074 2875160 - acriflavin resistance protein PFAM: acriflavin resistance protein~KEGG: bcb:BCB4264_A5560 transporter%2C AcrB/AcrD/AcrF family gene gene2594 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2548 Amir_2549 Amir_2549 Amir_2549 2875524 2876480 - conserved hypothetical protein KEGG: afw:Anae109_0827 hypothetical protein gene gene2595 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2549 Amir_2550 Amir_2550 Amir_2550 2876782 2877396 + hypothetical protein KEGG: AGAP007349-PA gene gene2596 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2550 Amir_2551 Amir_2551 Amir_2551 2877509 2878942 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: spe:Spro_1465 major facilitator transporter gene gene2597 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2551 Amir_2552 Amir_2552 Amir_2552 2879043 2879540 + Activator of Hsp90 ATPase 1 family protein PFAM: Activator of Hsp90 ATPase 1 family protein~KEGG: scl:sce6060 hypothetical protein gene gene2598 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2552 Amir_2553 Amir_2553 Amir_2553 2879792 2880706 + cytochrome oxidase assembly PFAM: cytochrome oxidase assembly~KEGG: tgr:Tgr7_3001 cytochrome oxidase assembly gene gene2599 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2553 Amir_2554 Amir_2554 Amir_2554 2880725 2881183 + hypothetical protein KEGG: sf3a2%3B splicing factor 3a%2C subunit 2%2C 66kDa gene gene2600 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2554 Amir_2555 Amir_2555 Amir_2555 2881596 2883752 + diguanylate cyclase/phosphodiesterase KEGG: met:M446_2712 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)~TIGRFAM: diguanylate cyclase~PFAM: EAL domain protein%3B GGDEF domain containing protein~SMART: EAL domain protein%3B GGDEF domain containing protein gene gene2601 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2555 Amir_2556 Amir_2556 Amir_2556 2884677 2885825 - Ricin B lectin PFAM: Ricin B lectin~SMART: Ricin B lectin~KEGG: dsh:Dshi_3592 Cna B domain-containing protein gene gene2602 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2556 Amir_2557 Amir_2557 Amir_2557 2886075 2886635 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: ank:AnaeK_2446 transcriptional regulator%2C TetR family gene gene2603 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2557 Amir_2558 Amir_2558 Amir_2558 2886739 2887677 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: ank:AnaeK_2445 short-chain dehydrogenase/reductase SDR gene gene2604 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2558 Amir_2559 Amir_2559 Amir_2559 2887995 2888852 + hypothetical protein KEGG: bpt:Bpet3133 translation initiation factor IF- 2 gene gene2605 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2559 Amir_2560 Amir_2560 Amir_2560 2888928 2890898 - Ricin B lectin PFAM: Ricin B lectin~KEGG: scl:sce0966 hypothetical protein gene gene2606 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2560 Amir_2561 Amir_2561 Amir_2561 2891609 2894212 + hypothetical protein KEGG: pap:PSPA7_4431 hypothetical protein gene gene2607 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2561 Amir_2562 Amir_2562 Amir_2562 2894209 2895429 + conserved hypothetical protein KEGG: rde:RD1_A0036 hypothetical protein gene gene2608 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2562 Amir_2563 Amir_2563 Amir_2563 2895511 2896290 - Pectate lyase PFAM: Pectate lyase~KEGG: hypothetical protein gene gene2609 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2563 Amir_2564 Amir_2564 Amir_2564 2896500 2897438 - Ornithine cyclodeaminase PFAM: ornithine cyclodeaminase/mu-crystallin~KEGG: atc:AGR_L_1807 hypothetical protein gene gene2610 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2564 Amir_2565 Amir_2565 Amir_2565 2897414 2898508 - alanine racemase domain protein PFAM: alanine racemase domain protein~KEGG: atc:AGR_L_1808 hypothetical protein gene gene2611 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2565 Amir_2566 Amir_2566 Amir_2566 2898505 2899167 - YheO domain protein PFAM: YheO domain protein~KEGG: pfl:PFL_2666 hypothetical protein gene gene2612 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2566 Amir_2567 Amir_2567 Amir_2567 2899280 2900359 + putative acyl-CoA dehydrogenase-related protein KEGG: bxe:Bxe_A2027 putative acyl-CoA dehydrogenase- related protein gene gene2613 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2567 Amir_2568 Amir_2568 Amir_2568 2900344 2901627 + LmbE family protein PFAM: LmbE family protein%3B Methyltransferase type 11%3B NodS family protein%3B Methyltransferase type 12~KEGG: psb:Psyr_3000 methyltransferase%2C putative gene gene2614 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2568 Amir_2569 Amir_2569 Amir_2569 2901624 2902307 + glycosyl transferase family 2 PFAM: glycosyl transferase family 2~KEGG: xcb:XC_2588 glycosyl transferase-related protein gene gene2615 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2569 Amir_2570 Amir_2570 Amir_2570 2902364 2902942 - GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: hypothetical protein gene gene2616 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2570 Amir_2571 Amir_2571 Amir_2571 2903217 2904017 - Pectate lyase PFAM: Pectate lyase~KEGG: hypothetical protein gene gene2617 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2571 Amir_2572 Amir_2572 Amir_2572 2904504 2905340 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: mca:MCA1942 sugar ABC transporter%2C permease protein gene gene2618 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2572 Amir_2573 Amir_2573 Amir_2573 2905348 2906199 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: smt:Smal_2681 monosaccharide-transporting ATPase gene gene2619 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2573 Amir_2574 Amir_2574 Amir_2574 2906250 2907599 + extracellular solute-binding protein family 1 PFAM: extracellular solute-binding protein family 1~KEGG: bha:BH1924 sugar transport system (sugar- binding protein) gene gene2620 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2574 Amir_2575 Amir_2575 Amir_2575 2907684 2909222 + Alpha-N-arabinofuranosidase PFAM: alpha-L-arabinofuranosidase domain protein~KEGG: vei:Veis_3457 alpha-N-arabinofuranosidase gene gene2621 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2575 Amir_2576 Amir_2576 Amir_2576 2909215 2910954 + Beta-galactosidase PFAM: glycoside hydrolase family 35%3B Glycoside hydrolase family 42 domain protein~KEGG: glb1l%3B galactosidase%2C beta 1-like gene gene2622 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2576 Amir_2577 Amir_2577 Amir_2577 2911112 2912152 + transcriptional regulator%2C LacI family PFAM: regulatory protein LacI%3B periplasmic binding protein/LacI transcriptional regulator~SMART: regulatory protein LacI~KEGG: scl:sce3081 lactose operon repressor gene gene2623 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2577 Amir_2578 Amir_2578 Amir_2578 2912272 2913534 - hypothetical protein gene gene2624 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2578 Amir_2579 Amir_2579 Amir_2579 2913527 2914147 - RNA polymerase%2C sigma-24 subunit%2C ECF subfamily TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family~PFAM: sigma-70 region 2 domain protein%3B Sigma-70 region 4 type 2~KEGG: dal:Dalk_4824 RNA polymerase%2C sigma-24 subunit%2C ECF subfamily gene gene2625 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2579 Amir_2580 Amir_2580 Amir_2580 2914411 2918286 + hypothetical protein KEGG: SL44-1%3B basic proline-rich protein gene gene2626 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2580 Amir_2581 Amir_2581 Amir_2581 2918303 2919166 + hypothetical protein gene gene2627 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2581 Amir_2582 Amir_2582 Amir_2582 2919258 2919707 + hypothetical protein gene gene2628 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2582 Amir_2583 Amir_2583 Amir_2583 2919747 2920181 + hypothetical protein gene gene2629 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2583 Amir_2584 Amir_2584 Amir_2584 2920691 2920951 + hypothetical protein gene gene2630 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2584 Amir_2585 Amir_2585 Amir_2585 2921297 2921926 + hypothetical protein KEGG: ank:AnaeK_0087 hypothetical protein gene gene2631 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2585 Amir_2586 Amir_2586 Amir_2586 2922003 2923367 - Endo-1%2C4-beta-xylanase KEGG: XylD%3B endoxylanase D~PFAM: glycoside hydrolase family 10%3B cellulose- binding family II~SMART: glycoside hydrolase family 10%3B cellulose- binding family II gene gene2632 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2586 Amir_2587 Amir_2587 Amir_2587 2923630 2925090 + Propeptide PepSY amd peptidase M4 PFAM: Propeptide PepSY amd peptidase M4%3B PepSY- associated TM helix domain protein~KEGG: psb:Psyr_2687 PepSY-associated TM helix gene gene2633 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2587 Amir_2588 Amir_2588 Amir_2588 2925087 2925698 + tetratricopeptide TPR_2 repeat protein KEGG: acp:A2cp1_3455 tetratricopeptide TPR_2 repeat protein gene gene2634 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2588 Amir_2589 Amir_2589 Amir_2589 2925905 2926495 + regulatory protein TetR PFAM: regulatory protein TetR%3B Tetracyclin repressor domain protein~KEGG: kpe:KPK_3281 tetracycline repressor protein class A from transposon 1721 gene gene2635 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2589 Amir_2590 Amir_2590 Amir_2590 2926751 2927077 + hypothetical protein gene gene2636 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2590 Amir_2591 Amir_2591 Amir_2591 2927082 2927324 + ATP-dependent Clp protease adaptor protein ClpS PFAM: ATP-dependent Clp protease adaptor protein ClpS gene gene2637 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2591 Amir_2592 Amir_2592 Amir_2592 2927321 2927806 + hypothetical protein gene gene2638 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2592 Amir_2593 Amir_2593 Amir_2593 2927890 2928405 + Appr-1-p processing domain protein PFAM: Appr-1-p processing domain protein~SMART: Appr-1-p processing domain protein~KEGG: reu:Reut_A1417 Appr-1-p processing gene gene2639 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2593 Amir_2594 Amir_2594 Amir_2594 2928470 2929108 - DSBA oxidoreductase PFAM: DSBA oxidoreductase~KEGG: scl:sce1376 DSBA oxidoreductase gene gene2640 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2594 Amir_2595 Amir_2595 Amir_2595 2929099 2929221 - hypothetical protein gene gene2641 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2595 Amir_2596 Amir_2596 Amir_2596 2929460 2931043 + drug resistance transporter%2C EmrB/QacA subfamily TIGRFAM: drug resistance transporter%2C EmrB/QacA subfamily~PFAM: major facilitator superfamily MFS_1~KEGG: bpe:BP2620 membrane efflux protein gene gene2642 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2596 Amir_2597 Amir_2597 Amir_2597 2931234 2931890 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: pla:Plav_0388 TetR family transcriptional regulator gene gene2643 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2597 Amir_2598 Amir_2598 Amir_2598 2932477 2932887 + hypothetical protein gene gene2644 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2598 Amir_2599 Amir_2599 Amir_2599 2932884 2933285 + transcriptional regulator%2C GntR family PFAM: regulatory protein GntR HTH~SMART: regulatory protein GntR HTH~KEGG: sus:Acid_1594 GntR family transcriptional regulator gene gene2645 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2599 Amir_2600 Amir_2600 Amir_2600 2933340 2934743 - hypothetical protein KEGG: hypothetical protein LOC100018482 gene gene2646 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2600 Amir_2601 Amir_2601 Amir_2601 2934763 2934903 - hypothetical protein gene gene2647 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2601 Amir_2602 Amir_2602 Amir_2602 2934896 2935165 - RNA polymerase%2C sigma-24 subunit%2C ECF subfamily PFAM: Sigma-70 region 4 type 2~KEGG: ajs:Ajs_2554 ECF subfamily RNA polymerase sigma-24 factor gene gene2648 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2602 Amir_2603 Amir_2603 Amir_2603 2935187 2935453 - RNA polymerase%2C sigma-24 subunit%2C ECF subfamily PFAM: sigma-70 region 2 domain protein~KEGG: scl:sce6054 ECF family RNA polymerase sigma factor gene gene2649 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2603 Amir_2604 Amir_2604 Amir_2604 2935497 2936015 - pseudogene gene2650 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2604 Amir_2605 Amir_2605 Amir_2605 2936321 2937337 - NAD-dependent epimerase/dehydratase PFAM: NAD-dependent epimerase/dehydratase%3B Male sterility domain%3B 3-beta hydroxysteroid dehydrogenase/isomerase%3B dTDP-4-dehydrorhamnose reductase~KEGG: tgr:Tgr7_0733 NAD-dependent epimerase/dehydratase gene gene2651 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2605 Amir_2606 Amir_2606 Amir_2606 2937510 2937896 - anti-sigma-factor antagonist TIGRFAM: anti-anti-sigma factor~PFAM: Sulfate transporter/antisigma-factor antagonist STAS gene gene2652 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2606 Amir_2607 Amir_2607 Amir_2607 2938060 2938791 - ANTAR domain protein with unknown sensor PFAM: ANTAR domain protein~KEGG: mpo:Mpop_5014 response regulator receiver and ANTAR domain protein gene gene2653 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2607 Amir_2608 Amir_2608 Amir_2608 2939083 2939847 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B KR domain protein~KEGG: cak:Caul_1958 short-chain dehydrogenase/reductase SDR gene gene2654 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2608 Amir_2609 Amir_2609 Amir_2609 2939926 2940540 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: gdi:GDI0313 TetR family transcriptional regulator gene gene2655 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2609 Amir_2610 Amir_2610 Amir_2610 2940611 2941480 - Extradiol ring-cleavage dioxygenase class III protein subunit B PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B~KEGG: scl:sce0163 hypothetical protein gene gene2656 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2610 Amir_2611 Amir_2611 Amir_2611 2941480 2942319 - NmrA family protein PFAM: NmrA family protein%3B dTDP-4-dehydrorhamnose reductase~KEGG: mxa:MXAN_5100 NmrA family protein gene gene2657 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2611 Amir_2612 Amir_2612 Amir_2612 2942367 2942849 - transcriptional regulator%2C MarR family PFAM: regulatory protein MarR~SMART: regulatory protein MarR~KEGG: bpt:Bpet2994 MarR family transcriptional regulator gene gene2658 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2612 Amir_2613 Amir_2613 Amir_2613 2942947 2944971 + hypothetical protein gene gene2659 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2613 Amir_2614 Amir_2614 Amir_2614 2945111 2946313 - cytochrome P450 PFAM: cytochrome P450~KEGG: bxe:Bxe_C0945 putative cytochrome P450 gene gene2660 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2614 Amir_2615 Amir_2615 Amir_2615 2946424 2947074 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: cak:Caul_4437 TetR family transcriptional regulator gene gene2661 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2615 Amir_2616 Amir_2616 Amir_2616 2947636 2949258 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: mrd:Mrad2831_2095 ABC transporter related gene gene2662 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2616 Amir_2617 Amir_2617 Amir_2617 2949322 2949688 - pseudogene gene2663 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2617 Amir_2618 Amir_2618 Amir_2618 2949727 2950524 - conserved hypothetical protein KEGG: mxa:MXAN_6120 hypothetical protein gene gene2664 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2618 Amir_2619 Amir_2619 Amir_2619 2950632 2950937 + transcriptional regulator%2C ArsR family PFAM: regulatory protein ArsR~SMART: regulatory protein ArsR~KEGG: rpd:RPD_3981 helix-turn-helix%2C type 11 gene gene2665 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2619 Amir_2620 Amir_2620 Amir_2620 2950934 2951320 + Glyoxalase/bleomycin resistance protein/dioxygenase PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase~KEGG: ppw:PputW619_2963 glyoxalase/bleomycin resistance protein/dioxygenase gene gene2666 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2620 Amir_2621 Amir_2621 Amir_2621 2951358 2952320 - Inosine/uridine-preferring nucleoside hydrolase PFAM: Inosine/uridine-preferring nucleoside hydrolase~KEGG: pat:Patl_3506 inosine/uridine-preferring nucleoside hydrolase gene gene2667 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2621 Amir_2622 Amir_2622 Amir_2622 2952595 2954967 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1%3B Riboflavin kinase%3B flavin reductase domain protein FMN- binding~KEGG: xfa:XF1765 drug:proton antiporter gene gene2668 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2622 Amir_2623 Amir_2623 Amir_2623 2954964 2956298 - xenobiotic compound monooxygenase A subunit KEGG: mms:mma_3466 xenobiotic compound monooxygenase A subunit gene gene2669 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2623 Amir_2624 Amir_2624 Amir_2624 2956295 2956975 - isochorismatase hydrolase PFAM: isochorismatase hydrolase~KEGG: pla:Plav_0992 isochorismatase hydrolase gene gene2670 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2624 Amir_2625 Amir_2625 Amir_2625 2956975 2958036 - Luciferase-like monooxygenase PFAM: Luciferase-like monooxygenase~KEGG: ccs:CCNA_01227 nitrilotriacetate monooxygenase gene gene2671 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2625 Amir_2626 Amir_2626 Amir_2626 2958083 2959228 - NMT1/THI5 like domain protein PFAM: NMT1/THI5 like domain protein~KEGG: oan:Oant_0280 NMT1/THI5 like domain protein gene gene2672 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2626 Amir_2627 Amir_2627 Amir_2627 2959399 2960265 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: bbr:BB0643 putative transport system permease protein gene gene2673 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2627 Amir_2628 Amir_2628 Amir_2628 2960280 2961107 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: pla:Plav_0892 ABC transporter related gene gene2674 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2628 Amir_2629 Amir_2629 Amir_2629 2961293 2961730 - hypothetical protein gene gene2675 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2629 Amir_2630 Amir_2630 Amir_2630 2962075 2962677 - hypothetical protein KEGG: bch:Bcen2424_2530 hypothetical protein gene gene2676 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2630 Amir_2631 Amir_2631 Amir_2631 2962674 2964263 - histidine kinase PFAM: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B histidine kinase HAMP region domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase HAMP region domain protein%3B histidine kinase A domain protein~KEGG: rso:RS02380 two-component sensor histidine kinase transcription regulator protein gene gene2677 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2631 Amir_2632 Amir_2632 Amir_2632 2964260 2964949 - two component transcriptional regulator%2C winged helix family PFAM: response regulator receiver%3B transcriptional regulator domain protein~SMART: response regulator receiver~KEGG: sfu:Sfum_2007 two component transcriptional regulator%2C winged helix family gene gene2678 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2632 Amir_2633 Amir_2633 Amir_2633 2965420 2966697 + protein of unknown function DUF21 PFAM: protein of unknown function DUF21%3B CBS domain containing protein%3B transporter-associated region~KEGG: sal:Sala_3102 hypothetical protein gene gene2679 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2633 Amir_2634 Amir_2634 Amir_2634 2966794 2967015 + conserved hypothetical protein KEGG: hypothetical protein gene gene2680 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2634 Amir_2635 Amir_2635 Amir_2635 2967074 2968042 - Alcohol dehydrogenase zinc-binding domain protein PFAM: Alcohol dehydrogenase zinc-binding domain protein%3B Alcohol dehydrogenase GroES domain protein~KEGG: pla:Plav_2411 alcohol dehydrogenase gene gene2681 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2635 Amir_2636 Amir_2636 Amir_2636 2968561 2969349 + molybdopterin dehydrogenase FAD-binding PFAM: molybdopterin dehydrogenase FAD-binding~KEGG: mno:Mnod_4658 molybdopterin dehydrogenase FAD- binding gene gene2682 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2636 Amir_2637 Amir_2637 Amir_2637 2969349 2972042 + aldehyde oxidase and xanthine dehydrogenase molybdopterin binding PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding%3B [2Fe-2S]-binding domain protein%3B aldehyde oxidase and xanthine dehydrogenase a/b hammerhead~KEGG: azc:AZC_4623 putative dehydrogenase gene gene2683 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2637 Amir_2638 Amir_2638 Amir_2638 2972032 2973465 - FAD dependent oxidoreductase PFAM: FAD dependent oxidoreductase~KEGG: scl:sce3282 monooxygenase flavin-binding family protein gene gene2684 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2638 Amir_2639 Amir_2639 Amir_2639 2973644 2974234 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: lch:Lcho_1914 TetR family transcriptional regulator gene gene2685 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2639 Amir_2640 Amir_2640 Amir_2640 2974574 2975272 - hypothetical protein gene gene2686 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2640 Amir_2641 Amir_2641 Amir_2641 2975269 2975823 - conserved hypothetical protein PFAM: conserved hypothetical protein~KEGG: lch:Lcho_0031 hypothetical protein gene gene2687 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2641 Amir_2642 Amir_2642 Amir_2642 2975820 2976317 - hypothetical protein gene gene2688 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2642 Amir_2643 Amir_2643 Amir_2643 2976381 2977709 - hypothetical protein KEGG: hypothetical protein gene gene2689 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2643 Amir_2644 Amir_2644 Amir_2644 2977706 2978206 - hypothetical protein KEGG: hypothetical protein gene gene2690 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2644 Amir_2645 Amir_2645 Amir_2645 2978443 2979207 - GntR domain protein PFAM: GntR domain protein%3B regulatory protein GntR HTH~SMART: regulatory protein GntR HTH~KEGG: pol:Bpro_0095 transcriptional regulator NanR gene gene2691 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2645 Amir_2646 Amir_2646 Amir_2646 2979418 2980779 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: eca:ECA0865 transport protein gene gene2692 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2646 Amir_2647 Amir_2647 Amir_2647 2980776 2982479 + Glycerone kinase PFAM: Dak kinase%3B Dak phosphatase~KEGG: eca:ECA0866 putative dihydroxyacetone kinase gene gene2693 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2647 Amir_2648 Amir_2648 Amir_2648 2982534 2983016 + ribose 5-phosphate isomerase TIGRFAM: ribose 5-phosphate isomerase%3B sugar- phosphate isomerase%2C RpiB/LacA/LacB family~PFAM: Ribose/galactose isomerase~KEGG: similar to ribose 5-phosphate isomerase%3B K01808 ribose 5-phosphate isomerase B gene gene2694 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2648 Amir_2649 Amir_2649 Amir_2649 2983016 2983789 + Triose-phosphate isomerase PFAM: triosephosphate isomerase~KEGG: eca:ECA0867 putative triosephosphate isomerase gene gene2695 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2649 Amir_2650 Amir_2650 Amir_2650 2983786 2984586 + Xylose isomerase domain protein TIM barrel PFAM: Xylose isomerase domain protein TIM barrel~KEGG: eca:ECA0868 hypothetical protein gene gene2696 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2650 Amir_2651 Amir_2651 Amir_2651 2984583 2985437 + NADP oxidoreductase coenzyme F420-dependent PFAM: NADP oxidoreductase coenzyme F420-dependent%3B NAD-dependent glycerol-3-phosphate dehydrogenase domain protein%3B Acetohydroxy acid isomeroreductase catalytic domain protein~KEGG: eca:ECA0869 hypothetical protein gene gene2697 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2651 Amir_2652 Amir_2652 Amir_2652 2986179 2986871 + CRISPR-associated protein%2C Cse3 family TIGRFAM: CRISPR-associated protein%2C Cse3 family~PFAM: CRISPR-associated protein CT1974~KEGG: scl:sce0560 hypothetical protein gene gene2698 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2652 Amir_2653 Amir_2653 Amir_2653 2988003 2988200 - hypothetical protein gene gene2699 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2653 Amir_2654 Amir_2654 Amir_2654 2988393 2988938 + hypothetical protein KEGG: gbe:GbCGDNIH1_0912 phosphate transport system permease protein PstA gene gene2700 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2654 Amir_2655 Amir_2655 Amir_2655 2988961 2989506 + phosphate ABC transporter%2C ATP-binding protein PstB KEGG: scl:sce2943 phosphate ABC transporter%2C ATP- binding protein PstB gene gene2701 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2655 Amir_2656 Amir_2656 Amir_2656 2989650 2990159 - hypothetical protein KEGG: yen:YE4124 isochorismatase family hydrolase gene gene2702 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2656 Amir_2657 Amir_2657 Amir_2657 2990251 2990916 + hypothetical protein gene gene2703 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2657 Amir_2658 Amir_2658 Amir_2658 2991381 2992367 + FAD dependent oxidoreductase PFAM: FAD dependent oxidoreductase~KEGG: azo:azo0209 sarcosine oxidase%2C beta subunit gene gene2704 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2658 Amir_2659 Amir_2659 Amir_2659 2992840 2993079 + acyl-carrier protein KEGG: bha:BH1846 acyl-carrier protein gene gene2705 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2659 Amir_2660 Amir_2660 Amir_2660 2993188 2994534 + L-lysine 6-monooxygenase (NADPH) KEGG: bmv:BMASAVP1_A1623 L-ornithine 5- monooxygenase gene gene2706 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2660 Amir_2661 Amir_2661 Amir_2661 2994572 2994940 + Cupin 2 conserved barrel domain protein PFAM: Cupin 2 conserved barrel domain protein~KEGG: psp:PSPPH_2411 hypothetical protein gene gene2707 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2661 Amir_2662 Amir_2662 Amir_2662 2994937 2996565 + Methionine--tRNA ligase PFAM: tRNA synthetase class I (M)~KEGG: pen:PSEEN0982 methionine--tRNA ligase gene gene2708 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2662 Amir_2663 Amir_2663 Amir_2663 2996575 2997816 + ATP-dependent carboxylate-amine ligase domain protein ATP-grasp PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp%3B phosphoribosylglycinamide synthetase~KEGG: plu:plu0116 hypothetical protein gene gene2709 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2663 Amir_2664 Amir_2664 Amir_2664 2997919 2998740 + amidinotransferase PFAM: amidinotransferase~KEGG: aeh:Mlg_0130 amidinotransferase gene gene2710 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2664 Amir_2665 Amir_2665 Amir_2665 2998737 2999099 + conserved hypothetical protein KEGG: gbm:Gbem_0509 hypothetical protein gene gene2711 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2665 Amir_2666 Amir_2666 Amir_2666 2999243 3001096 + extracellular solute-binding protein family 5 PFAM: extracellular solute-binding protein family 5~KEGG: acr:Acry_1185 extracellular solute-binding protein gene gene2712 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2666 Amir_2667 Amir_2667 Amir_2667 3001093 3002400 + sodium/hydrogen exchanger PFAM: sodium/hydrogen exchanger~KEGG: mno:Mnod_3112 sodium/hydrogen exchanger gene gene2713 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2667 Amir_2668 Amir_2668 Amir_2668 3002520 3003767 + phosphoribosylglycinamide synthetase PFAM: phosphoribosylglycinamide synthetase%3B protein of unknown function DUF201%3B RimK domain protein ATP-grasp~KEGG: plu:plu0116 hypothetical protein gene gene2714 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2668 Amir_2669 Amir_2669 Amir_2669 3003888 3005195 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: ank:AnaeK_4388 major facilitator superfamily MFS_1 gene gene2715 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2669 Amir_2670 Amir_2670 Amir_2670 3005322 3005822 + hypothetical protein gene gene2716 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2670 Amir_2671 Amir_2671 Amir_2671 3006523 3008538 + O-methyltransferase family 2 PFAM: O-methyltransferase family 2~KEGG: mxa:MXAN_2296 O-methyltransferase family protein gene gene2717 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2671 Amir_2672 Amir_2672 Amir_2672 3008596 3009199 - LigA KEGG: ade:Adeh_0244 LigA gene gene2718 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2672 Amir_2673 Amir_2673 Amir_2673 3009401 3012139 + hypothetical protein KEGG: hypothetical protein gene gene2719 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2673 Amir_2674 Amir_2674 Amir_2674 3012438 3013211 + hypothetical protein KEGG: hch:HCH_01940 phytoene dehydrogenase and related protein gene gene2720 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2674 Amir_2675 Amir_2675 Amir_2675 3013345 3015956 + Tetratricopeptide TPR_4 PFAM: Tetratricopeptide TPR_4~KEGG: afw:Anae109_3347 transcriptional activator domain-containing protein gene gene2721 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2675 Amir_2676 Amir_2676 Amir_2676 3016403 3017134 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: bca:BCE_2589 ATP-binding transport protein NatA gene gene2722 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2676 Amir_2677 Amir_2677 Amir_2677 3017170 3017430 + hypothetical protein gene gene2723 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2677 Amir_2678 Amir_2678 Amir_2678 3017571 3018395 - Oleoyl-(acyl-carrier-protein) hydrolase PFAM: Thioesterase~KEGG: bpd:BURPS668_A0873 pyochelin biosynthetic protein PchC gene gene2724 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2678 Amir_2679 Amir_2679 Amir_2679 3018623 3019255 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: tmz:Tmz1t_0804 transcriptional regulator%2C TetR family gene gene2725 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2679 Amir_2680 Amir_2680 Amir_2680 3019338 3021143 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: pol:Bpro_1369 major facilitator superfamily MFS_1 gene gene2726 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2680 Amir_2681 Amir_2681 Amir_2681 3021545 3026995 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B Beta- ketoacyl synthase%3B KR domain protein%3B Acyl transferase%3B Erythronolide synthase docking%3B phosphopantetheine- binding%3B NAD-dependent epimerase/dehydratase~KEGG: eca:ECA0602 type I polyketide synthase gene gene2727 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2681 Amir_2682 Amir_2682 Amir_2682 3027042 3036320 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B Beta- ketoacyl synthase%3B Acyl transferase%3B KR domain protein%3B Erythronolide synthase docking%3B NAD-dependent epimerase/dehydratase%3B phosphopantetheine-binding~KEGG: mxa:MXAN_4527 polyketide synthase gene gene2728 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2682 Amir_2683 Amir_2683 Amir_2683 3036332 3041137 + Acyl transferase PFAM: Acyl transferase%3B Beta-ketoacyl synthase%3B short-chain dehydrogenase/reductase SDR%3B Male sterility domain%3B KR domain protein%3B Erythronolide synthase docking%3B NAD-dependent epimerase/dehydratase%3B phosphopantetheine- binding~KEGG: mxa:MXAN_4527 polyketide synthase gene gene2729 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2683 Amir_2684 Amir_2684 Amir_2684 3041176 3057378 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B Beta- ketoacyl synthase%3B Acyl transferase%3B KR domain protein%3B Erythronolide synthase docking%3B Thioesterase%3B NAD- dependent epimerase/dehydratase%3B phosphopantetheine- binding~KEGG: met:M446_0170 beta-ketoacyl synthase gene gene2730 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2684 Amir_2685 Amir_2685 Amir_2685 3057462 3058352 + proline-specific peptidase TIGRFAM: proline-specific peptidase~PFAM: alpha/beta hydrolase fold~KEGG: rru:Rru_A2180 peptidase S33%2C tricorn interacting factor 1 gene gene2731 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2685 Amir_2686 Amir_2686 Amir_2686 3058366 3058851 - hypothetical protein gene gene2732 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2686 Amir_2687 Amir_2687 Amir_2687 3059008 3059256 - phosphopantetheine-binding KEGG: mrd:Mrad2831_0184 phosphopantetheine-binding gene gene2733 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2687 Amir_2688 Amir_2688 Amir_2688 3059475 3061064 + AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: gbm:Gbem_0542 amino acid adenylation domain protein gene gene2734 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2688 Amir_2689 Amir_2689 Amir_2689 3061179 3062702 - AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: aeh:Mlg_0131 amino acid adenylation domain- containing protein gene gene2735 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2689 Amir_2690 Amir_2690 Amir_2690 3062743 3063669 - (acyl-carrier-protein)S-malonyltransferase-like protein KEGG: plu:plu2834 acyl carrier protein S- malonyltransferase gene gene2736 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2690 Amir_2691 Amir_2691 Amir_2691 3063696 3064955 - aminotransferase class I and II PFAM: aminotransferase class I and II~KEGG: aeh:Mlg_2554 aminotransferase gene gene2737 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2691 Amir_2692 Amir_2692 Amir_2692 3065051 3066403 - L-lysine 2%2C3-aminomutase KEGG: mxa:MXAN_6263 hypothetical protein gene gene2738 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2692 Amir_2693 Amir_2693 Amir_2693 3066961 3068148 + cytochrome P450 PFAM: cytochrome P450~KEGG: bca:BCE_2696 cytochrome P450 gene gene2739 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2693 Amir_2694 Amir_2694 Amir_2694 3068145 3068387 + conserved hypothetical protein KEGG: cak:Caul_1918 hypothetical protein gene gene2740 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2694 Amir_2695 Amir_2695 Amir_2695 3068486 3089818 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B Beta- ketoacyl synthase%3B Male sterility domain%3B Acyl transferase%3B KR domain protein%3B phosphopantetheine- binding%3B NAD-dependent epimerase/dehydratase~KEGG: met:M446_0170 beta-ketoacyl synthase gene gene2741 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2695 Amir_2696 Amir_2696 Amir_2696 3090196 3092991 + transcriptional regulator%2C LuxR family PFAM: regulatory protein LuxR~SMART: regulatory protein LuxR~KEGG: reh:H16_A1278 ATP-dependent transcriptional regulator containing adenylate cyclase related domains gene gene2742 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2696 Amir_2697 Amir_2697 Amir_2697 3093198 3094037 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: glo:Glov_3629 ABC transporter related gene gene2743 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2697 Amir_2698 Amir_2698 Amir_2698 3094037 3096604 + protein of unknown function DUF214 PFAM: protein of unknown function DUF214~KEGG: gme:Gmet_1517 hypothetical protein gene gene2744 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2698 Amir_2699 Amir_2699 Amir_2699 3097146 3097826 - two component transcriptional regulator%2C LuxR family PFAM: response regulator receiver%3B regulatory protein LuxR~SMART: response regulator receiver%3B regulatory protein LuxR~KEGG: psb:Psyr_1940 LuxR response regulator receiver gene gene2745 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2699 Amir_2700 Amir_2700 Amir_2700 3097790 3099079 - histidine kinase PFAM: histidine kinase dimerization and phosphoacceptor region%3B ATP-binding region ATPase domain protein~SMART: ATP-binding region ATPase domain protein~KEGG: cps:CPS_1261 sensor histidine kinase gene gene2746 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2700 Amir_2701 Amir_2701 Amir_2701 3099293 3100354 + hypothetical protein gene gene2747 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2701 Amir_2702 Amir_2702 Amir_2702 3100521 3101567 + conserved hypothetical protein KEGG: hypothetical protein gene gene2748 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2702 Amir_2703 Amir_2703 Amir_2703 3101661 3103421 + Cna B domain protein PFAM: Cna B domain protein~KEGG: gme:Gmet_2043 hypothetical protein gene gene2749 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2703 Amir_2704 Amir_2704 Amir_2704 3103431 3103922 - O-methyltransferase family 3 PFAM: O-methyltransferase family 3~KEGG: mlo:mlr0279 O-methyltransferase gene gene2750 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2704 Amir_2705 Amir_2705 Amir_2705 3103926 3105230 - hypothetical protein KEGG: afw:Anae109_2424 DNA mismatch repair protein MutS domain-containing protein gene gene2751 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2705 Amir_2706 Amir_2706 Amir_2706 3105498 3106568 + periplasmic binding protein PFAM: periplasmic binding protein~KEGG: rle:RL3052 putative cationic solute-binding component of ABC transporter gene gene2752 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2706 Amir_2707 Amir_2707 Amir_2707 3106565 3107587 + transport system permease protein PFAM: transport system permease protein%3B ABC-3 protein~KEGG: rec:RHECIAT_PC0000463 putative iron ABC transporter%2C permease protein gene gene2753 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2707 Amir_2708 Amir_2708 Amir_2708 3107584 3108357 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: mpo:Mpop_4222 ABC transporter related gene gene2754 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2708 Amir_2709 Amir_2709 Amir_2709 3108506 3109084 - regulatory protein TetR PFAM: regulatory protein TetR~KEGG: bcr:BCAH187_A5151 transcriptional regulator%2C TetR family gene gene2755 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2709 Amir_2710 Amir_2710 Amir_2710 3109179 3109892 + beta-lactamase domain protein PFAM: beta-lactamase domain protein~KEGG: Zn-dependent hydrolases%2C including glyoxylases gene gene2756 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2710 Amir_2711 Amir_2711 Amir_2711 3110003 3110284 + hypothetical protein KEGG: sal:Sala_0018 hypothetical protein gene gene2757 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2711 Amir_2712 Amir_2712 Amir_2712 3110281 3110814 - mucin-associated surface protein KEGG: jan:Jann_1769 mucin-associated surface protein gene gene2758 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2712 Amir_2713 Amir_2713 Amir_2713 3110811 3113327 - NB-ARC domain protein PFAM: NB-ARC domain protein%3B Tetratricopeptide TPR_4~SMART: Tetratricopeptide domain protein~KEGG: scl:sce5225 protein kinase gene gene2759 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2713 Amir_2714 Amir_2714 Amir_2714 3113324 3113875 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: mxa:MXAN_2145 transcriptional regulator%2C TetR family gene gene2760 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2714 Amir_2715 Amir_2715 Amir_2715 3113968 3114873 + Luciferase-like monooxygenase PFAM: Luciferase-like monooxygenase~KEGG: rpb:RPB_4431 coenzyme F420-dependent N(5)%2CN(10)-methenyltetrahydromethanopterin gene gene2761 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2715 Amir_2716 Amir_2716 Amir_2716 3114940 3117765 - transcriptional regulator%2C LuxR family PFAM: regulatory protein LuxR%3B Tetratricopeptide TPR_4~SMART: regulatory protein LuxR~KEGG: afw:Anae109_3347 transcriptional activator domain-containing protein gene gene2762 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2716 Amir_2717 Amir_2717 Amir_2717 3118394 3119455 - phospho-2-dehydro-3-deoxyheptonate aldolase KEGG: pol:Bpro_2057 phospho-2-dehydro-3- deoxyheptonate aldolase~TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase~PFAM: DAHP synthetase I/KDSA gene gene2763 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2717 Amir_2718 Amir_2718 Amir_2718 3119448 3120851 - drug resistance transporter%2C EmrB/QacA subfamily TIGRFAM: drug resistance transporter%2C EmrB/QacA subfamily~PFAM: major facilitator superfamily MFS_1~KEGG: gdj:Gdia_2404 drug resistance transporter%2C EmrB/QacA subfamily gene gene2764 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2718 Amir_2719 Amir_2719 Amir_2719 3120848 3131080 - amino acid adenylation domain protein TIGRFAM: amino acid adenylation domain protein%3B non- ribosomal peptide synthase~PFAM: AMP-dependent synthetase and ligase%3B phosphopantetheine-binding%3B condensation domain protein~KEGG: pap:PSPA7_2858 peptide synthase gene gene2765 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2719 Amir_2720 Amir_2720 Amir_2720 3131153 3131938 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: dac:Daci_3149 ABC transporter related gene gene2766 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2720 Amir_2721 Amir_2721 Amir_2721 3131935 3132951 - transport system permease protein PFAM: transport system permease protein~KEGG: yen:YE3620 iron-enterobactin transporter permease gene gene2767 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2721 Amir_2722 Amir_2722 Amir_2722 3132948 3133946 - transport system permease protein PFAM: transport system permease protein~KEGG: cvi:CV_2236 iron-enterobactin transporter membrane protein gene gene2768 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2722 Amir_2723 Amir_2723 Amir_2723 3133943 3134965 - periplasmic binding protein PFAM: periplasmic binding protein~KEGG: bsu:BSU39610 hypothetical protein gene gene2769 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2723 Amir_2724 Amir_2724 Amir_2724 3135012 3135947 - Siderophore-interacting protein PFAM: Siderophore-interacting protein%3B FAD-binding 9 siderophore-interacting domain protein~KEGG: cti:RALTA_B1102 siderophore-interacting protein gene gene2770 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2724 Amir_2725 Amir_2725 Amir_2725 3135944 3136842 - pseudogene gene2771 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2725 Amir_2726 Amir_2726 Amir_2726 3136848 3138524 - AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: scl:sce3880 (2%2C3-dihydroxybenzoyl)adenylate synthase gene gene2772 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2726 Amir_2727 Amir_2727 Amir_2727 3138521 3140032 - isochorismate synthase TIGRFAM: isochorismate synthase~PFAM: Chorismate binding-like~KEGG: mxa:MXAN_3646 isochorismate synthase DhbC gene gene2773 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2727 Amir_2728 Amir_2728 Amir_2728 3140270 3141040 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B KR domain protein%3B NAD-dependent epimerase/dehydratase~KEGG: bcy:Bcer98_1754 2%2C3-dihydroxybenzoate-2%2C3- dehydrogenase gene gene2774 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2728 Amir_2729 Amir_2729 Amir_2729 3141299 3142846 - TAP domain protein PFAM: TAP domain protein%3B alpha/beta hydrolase fold~KEGG: hypothetical protein gene gene2775 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2729 Amir_2730 Amir_2730 Amir_2730 3143249 3144301 + transport system permease protein PFAM: transport system permease protein~KEGG: dac:Daci_3791 transport system permease protein gene gene2776 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2730 Amir_2731 Amir_2731 Amir_2731 3144301 3145068 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: bte:BTH_I1413 iron compound ABC transporter%2C ATP-binding protein gene gene2777 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2731 Amir_2732 Amir_2732 Amir_2732 3145138 3146154 + periplasmic binding protein PFAM: periplasmic binding protein~KEGG: bpd:BURPS668_3152 putative iron chelate uptake ABC transporter%2C periplasmic solute-binding protein gene gene2778 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2732 Amir_2733 Amir_2733 Amir_2733 3146360 3146572 - transcriptional regulator%2C XRE family SMART: helix-turn-helix domain protein~KEGG: bcr:BCAH187_A3038 DNA-binding protein gene gene2779 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2733 Amir_2734 Amir_2734 Amir_2734 3146574 3147053 - hypothetical protein gene gene2780 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2734 Amir_2735 Amir_2735 Amir_2735 3147165 3147662 - hypothetical protein KEGG: bpl:BURPS1106A_1193 DNA translocase FtsK gene gene2781 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2735 Amir_2736 Amir_2736 Amir_2736 3147876 3149168 + histidine kinase PFAM: histidine kinase dimerization and phosphoacceptor region%3B ATP-binding region ATPase domain protein~SMART: ATP-binding region ATPase domain protein~KEGG: scl:sce5432 putative two-component system sensor kinase gene gene2782 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2736 Amir_2737 Amir_2737 Amir_2737 3149165 3149848 + two component transcriptional regulator%2C LuxR family PFAM: response regulator receiver%3B regulatory protein LuxR~SMART: response regulator receiver%3B regulatory protein LuxR~KEGG: scl:sce5431 two-component system response regulator gene gene2783 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2737 Amir_2738 Amir_2738 Amir_2738 3149812 3151838 - pseudogene gene2784 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2738 Amir_2739 Amir_2739 Amir_2739 3153038 3154318 + enolase KEGG: azc:AZC_3061 enolase~TIGRFAM: enolase~PFAM: enolase gene gene2785 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2739 Amir_2740 Amir_2740 Amir_2740 3154305 3154508 - hypothetical protein gene gene2786 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2740 Amir_2741 Amir_2741 Amir_2741 3154505 3155335 - hypothetical protein gene gene2787 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2741 Amir_2742 Amir_2742 Amir_2742 3155761 3156639 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: bsu:BSU09890 hypothetical protein gene gene2788 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2742 Amir_2743 Amir_2743 Amir_2743 3156639 3157721 + ABC-type Na+ efflux pump permease component KEGG: bha:BH1167 hypothetical protein gene gene2789 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2743 Amir_2744 Amir_2744 Amir_2744 3157897 3159756 + hypothetical protein KEGG: hypothetical protein gene gene2790 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2744 Amir_2745 Amir_2745 Amir_2745 3159898 3161466 - methyl-accepting chemotaxis sensory transducer with GAF sensor PFAM: chemotaxis sensory transducer%3B GAF domain protein~SMART: chemotaxis sensory transducer%3B GAF domain protein~KEGG: aba:Acid345_1672 methyl-accepting chemotaxis sensory transducer gene gene2791 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2745 Amir_2746 Amir_2746 Amir_2746 3161696 3162205 + putative GAF sensor protein PFAM: GAF domain protein~KEGG: tmz:Tmz1t_1845 multi-sensor hybrid histidine kinase gene gene2792 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2746 Amir_2747 Amir_2747 Amir_2747 3162460 3163110 + ErfK/YbiS/YcfS/YnhG family protein PFAM: ErfK/YbiS/YcfS/YnhG family protein~KEGG: gbm:Gbem_1372 hypothetical protein gene gene2793 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2747 Amir_2748 Amir_2748 Amir_2748 3163267 3163428 + hypothetical protein gene gene2794 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2748 Amir_2749 Amir_2749 Amir_2749 3163684 3163986 + hypothetical protein gene gene2795 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2749 Amir_2750 Amir_2750 Amir_2750 3164541 3171884 + YD repeat protein KEGG: bcb:BCB4264_A3445 wall-associated protein~TIGRFAM: YD repeat protein~PFAM: PA14 domain protein%3B YD repeat-containing protein~SMART: PA14 domain protein%3B LamG domain protein jellyroll fold domain protein gene gene2796 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2750 Amir_2751 Amir_2751 Amir_2751 3171962 3172429 + hypothetical protein gene gene2797 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2751 Amir_2752 Amir_2752 Amir_2752 3172442 3172726 - hypothetical protein gene gene2798 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2752 Amir_2753 Amir_2753 Amir_2753 3172827 3173732 - transcriptional regulator%2C RpiR family PFAM: sugar isomerase (SIS)~KEGG: rso:RSc1377 hypothetical protein gene gene2799 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2753 Amir_2754 Amir_2754 Amir_2754 3173871 3175268 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1%3B General substrate transporter~KEGG: bpy:Bphyt_2088 major facilitator superfamily MFS_1 gene gene2800 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2754 Amir_2755 Amir_2755 Amir_2755 3175265 3175699 + putative GAF sensor protein KEGG: vei:Veis_0546 putative GAF sensor protein gene gene2801 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2755 Amir_2756 Amir_2756 Amir_2756 3175696 3176907 + amidohydrolase PFAM: amidohydrolase%3B Amidohydrolase 3~KEGG: rru:Rru_A3412 amidohydrolase gene gene2802 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2756 Amir_2757 Amir_2757 Amir_2757 3176968 3177612 - two component transcriptional regulator%2C LuxR family PFAM: response regulator receiver%3B regulatory protein LuxR%3B Sigma-70 region 4 type 2~SMART: regulatory protein LuxR%3B response regulator receiver~KEGG: bxe:Bxe_A1815 two component LuxR family transcriptional regulator gene gene2803 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2757 Amir_2758 Amir_2758 Amir_2758 3177600 3178769 - histidine kinase PFAM: histidine kinase dimerization and phosphoacceptor region%3B ATP-binding region ATPase domain protein~SMART: ATP-binding region ATPase domain protein~KEGG: mch:Mchl_4713 histidine kinase gene gene2804 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2758 Amir_2759 Amir_2759 Amir_2759 3178855 3179625 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: pla:Plav_1100 ABC transporter related gene gene2805 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2759 Amir_2760 Amir_2760 Amir_2760 3179625 3182093 + protein of unknown function DUF214 PFAM: protein of unknown function DUF214~KEGG: mxa:MXAN_6766 ABC transporter%2C permease protein gene gene2806 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2760 Amir_2761 Amir_2761 Amir_2761 3182217 3182645 + pyridoxamine 5'-phosphate oxidase-related FMN- binding PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding gene gene2807 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2761 Amir_2762 Amir_2762 Amir_2762 3183189 3183293 + hypothetical protein gene gene2808 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2762 Amir_2763 Amir_2763 Amir_2763 3183375 3184583 + hypothetical protein KEGG: sdn:Sden_2265 hypothetical protein gene gene2809 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2763 Amir_2764 Amir_2764 Amir_2764 3184580 3186631 + TPR repeat-containing protein PFAM: TPR repeat-containing protein%3B Tetratricopeptide TPR_4%3B Tetratricopeptide TPR_2 repeat protein~SMART: Tetratricopeptide domain protein~KEGG: sdn:Sden_2266 TPR repeat-containing protein gene gene2810 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2764 Amir_2765 Amir_2765 Amir_2765 3187367 3188599 + ROK family protein PFAM: ROK family protein~KEGG: mxa:MXAN_6549 transcriptional regulator%2C ROK family gene gene2811 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2765 Amir_2766 Amir_2766 Amir_2766 3188784 3190451 + hypothetical protein gene gene2812 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2766 Amir_2767 Amir_2767 Amir_2767 3190466 3192613 - hypothetical protein KEGG: scl:sce5225 protein kinase gene gene2813 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2767 Amir_2768 Amir_2768 Amir_2768 3192907 3193557 - hypothetical protein KEGG: hypothetical protein gene gene2814 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2768 Amir_2769 Amir_2769 Amir_2769 3193712 3195931 - heavy metal translocating P-type ATPase TIGRFAM: heavy metal translocating P-type ATPase%3B copper-translocating P-type ATPase%3B ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC~PFAM: E1-E2 ATPase-associated domain protein%3B Heavy metal transport/detoxification protein%3B Haloacid dehalogenase domain protein hydrolase~KEGG: mxa:MXAN_3422 copper-translocating P-type ATPase gene gene2815 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2769 Amir_2770 Amir_2770 Amir_2770 3195993 3197891 - copper resistance D domain protein PFAM: copper resistance D domain protein~KEGG: csa:Csal_0081 hypothetical protein gene gene2816 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2770 Amir_2771 Amir_2771 Amir_2771 3198006 3198737 + DSBA oxidoreductase PFAM: DSBA oxidoreductase~KEGG: mxa:MXAN_3206 DsbA-like thioredoxin domain protein gene gene2817 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2771 Amir_2772 Amir_2772 Amir_2772 3198734 3199279 + Vitamin K epoxide reductase PFAM: Vitamin K epoxide reductase~SMART: Vitamin K epoxide reductase~KEGG: scl:sce9005 hypothetical protein gene gene2818 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2772 Amir_2773 Amir_2773 Amir_2773 3199384 3199962 - RNA polymerase%2C sigma-24 subunit%2C ECF subfamily TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family~PFAM: Sigma-70 region 4 type 2%3B sigma-70 region 2 domain protein%3B sigma-70 region 4 domain protein~KEGG: bid:Bind_3241 ECF subfamily RNA polymerase sigma-24 factor gene gene2819 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2773 Amir_2774 Amir_2774 Amir_2774 3200007 3200735 + putative integral membrane protein KEGG: rso:RS02209 putative transmembrane protein gene gene2820 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2774 Amir_2775 Amir_2775 Amir_2775 3200780 3201331 + GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: bcm:Bcenmc03_1936 GCN5-related N- acetyltransferase gene gene2821 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2775 Amir_2776 Amir_2776 Amir_2776 3201351 3201971 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: bha:BH2103 hypothetical protein gene gene2822 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2776 Amir_2777 Amir_2777 Amir_2777 3202011 3203837 + ABC transporter related PFAM: ABC transporter related%3B ABC transporter transmembrane region~SMART: AAA ATPase~KEGG: bcb:BCB4264_A1961 ABC transporter%2C permease/ATP-binding protein gene gene2823 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2777 Amir_2778 Amir_2778 Amir_2778 3203971 3204924 + Luciferase-like monooxygenase PFAM: Luciferase-like monooxygenase~KEGG: rpb:RPB_4431 coenzyme F420-dependent N(5)%2CN(10)-methenyltetrahydromethanopterin gene gene2824 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2778 Amir_2779 Amir_2779 Amir_2779 3204921 3205478 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: mrd:Mrad2831_1768 TetR family transcriptional regulator gene gene2825 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2779 Amir_2780 Amir_2780 Amir_2780 3205511 3206698 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: kpn:KPN_00876 putative DeoR-type transcriptional regulator gene gene2826 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2780 Amir_2781 Amir_2781 Amir_2781 3207073 3209118 + glycoside hydrolase family 5 PFAM: glycoside hydrolase family 5%3B protein of unknown function DUF291%3B cellulose-binding family II~SMART: cellulose-binding family II~KEGG: bha:BH0603 endo-beta-1%2C4-glucanase (celulase B) gene gene2827 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2781 Amir_2782 Amir_2782 Amir_2782 3209260 3210144 - transcriptional regulator%2C LysR family PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: mxa:MXAN_1575 transcriptional regulator%2C LysR family gene gene2828 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2782 Amir_2783 Amir_2783 Amir_2783 3210249 3211157 + Pyridoxal-5'-phosphate-dependent protein beta subunit PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit~KEGG: aav:Aave_3768 threonine dehydratase gene gene2829 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2783 Amir_2784 Amir_2784 Amir_2784 3211195 3212049 - transcriptional regulator%2C XRE family SMART: helix-turn-helix domain protein~KEGG: rle:RL4049 hypothetical protein gene gene2830 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2784 Amir_2785 Amir_2785 Amir_2785 3212175 3213638 + aldehyde dehydrogenase PFAM: Aldehyde Dehydrogenase~KEGG: swi:Swit_1745 aldehyde dehydrogenase (acceptor) gene gene2831 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2785 Amir_2786 Amir_2786 Amir_2786 3213693 3213923 - hypothetical protein gene gene2832 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2786 Amir_2787 Amir_2787 Amir_2787 3214052 3214627 + hypothetical protein gene gene2833 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2787 Amir_2788 Amir_2788 Amir_2788 3214818 3215327 + RNA polymerase%2C sigma-24 subunit%2C ECF subfamily TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family~PFAM: sigma-70 region 4 domain protein%3B Sigma-70 region 4 type 2~KEGG: rpc:RPC_1740 RNA polymerase sigma factor gene gene2834 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2788 Amir_2789 Amir_2789 Amir_2789 3215438 3215674 + pseudogene gene2835 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2789 Amir_2790 Amir_2790 Amir_2790 3215811 3218000 - conserved hypothetical protein KEGG: bsu:BSU05430 hypothetical protein gene gene2836 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2790 Amir_2791 Amir_2791 Amir_2791 3218032 3218571 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: bav:BAV3196 TetR-family trasncriptional regulator gene gene2837 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2791 Amir_2792 Amir_2792 Amir_2792 3219015 3219581 + hypothetical protein gene gene2838 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2792 Amir_2793 Amir_2793 Amir_2793 3219693 3220460 - GAF domain protein PFAM: GAF domain protein%3B ANTAR domain protein~SMART: GAF domain protein~KEGG: sus:Acid_4463 putative GAF sensor protein gene gene2839 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2793 Amir_2794 Amir_2794 Amir_2794 3220753 3221253 + protein of unknown function DUF322 PFAM: protein of unknown function DUF322~KEGG: bha:BH2786 hypothetical protein gene gene2840 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2794 Amir_2795 Amir_2795 Amir_2795 3221250 3221855 + hypothetical protein KEGG: GH15499 gene product from transcript GH15499- RA gene gene2841 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2795 Amir_2796 Amir_2796 Amir_2796 3221852 3222028 + hypothetical protein gene gene2842 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2796 Amir_2797 Amir_2797 Amir_2797 3222034 3222447 + protein of unknown function DUF322 PFAM: protein of unknown function DUF322~KEGG: mes:Meso_4196 protein of unknown function DUF1403 gene gene2843 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2797 Amir_2798 Amir_2798 Amir_2798 3222444 3222989 + hypothetical protein gene gene2844 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2798 Amir_2799 Amir_2799 Amir_2799 3222986 3223588 + hypothetical protein gene gene2845 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2799 Amir_2800 Amir_2800 Amir_2800 3223578 3223868 + hypothetical protein gene gene2846 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2800 Amir_2801 Amir_2801 Amir_2801 3223865 3224527 + hypothetical protein gene gene2847 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2801 Amir_2802 Amir_2802 Amir_2802 3224955 3225573 - pseudogene gene2848 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2802 Amir_2803 Amir_2803 Amir_2803 3226027 3227190 - glycosyl transferase group 1 PFAM: glycosyl transferase group 1~KEGG: bmn:BMA10247_A2262 glycosyl transferase%2C group 1 family protein gene gene2849 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2803 Amir_2804 Amir_2804 Amir_2804 3227795 3228592 - GAF domain protein PFAM: GAF domain protein%3B ANTAR domain protein~SMART: GAF domain protein~KEGG: sus:Acid_4463 putative GAF sensor protein gene gene2850 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2804 Amir_2805 Amir_2805 Amir_2805 3228634 3229410 - ANTAR domain protein with unknown sensor PFAM: ANTAR domain protein%3B GAF domain protein~SMART: GAF domain protein~KEGG: azo:azo1490 putative signaling protein gene gene2851 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2805 Amir_2806 Amir_2806 Amir_2806 3229410 3230129 - hypothetical protein KEGG: afw:Anae109_0792 GAF sensor signal transduction histidine kinase gene gene2852 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2806 Amir_2807 Amir_2807 Amir_2807 3230224 3230691 - anti-sigma-factor antagonist TIGRFAM: anti-anti-sigma factor~PFAM: Sulfate transporter/antisigma-factor antagonist STAS~KEGG: mag:amb0333 anti-anti-sigma regulatory factor gene gene2853 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2807 Amir_2808 Amir_2808 Amir_2808 3231881 3232513 + hypothetical protein KEGG: hypothetical protein gene gene2854 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2808 Amir_2809 Amir_2809 Amir_2809 3232570 3232914 - hypothetical protein gene gene2855 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2809 Amir_2810 Amir_2810 Amir_2810 3233060 3236017 + hypothetical protein KEGG: GA27442 gene product from transcript GA27442- RA gene gene2856 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2810 Amir_2811 Amir_2811 Amir_2811 3236050 3236703 - two component transcriptional regulator%2C LuxR family PFAM: response regulator receiver%3B regulatory protein LuxR%3B Sigma-70 region 4 type 2~SMART: regulatory protein LuxR%3B response regulator receiver~KEGG: scl:sce5431 two-component system response regulator gene gene2857 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2811 Amir_2812 Amir_2812 Amir_2812 3236718 3237666 - pseudogene gene2858 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2812 Amir_2813 Amir_2813 Amir_2813 3237954 3239747 + hypothetical protein KEGG: hypothetical protein gene gene2859 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2813 Amir_2814 Amir_2814 Amir_2814 3239824 3242874 + hypothetical protein KEGG: hypothetical protein gene gene2860 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2814 Amir_2815 Amir_2815 Amir_2815 3243288 3243986 + Methyltransferase type 12 PFAM: Methyltransferase type 12%3B Methyltransferase type 11~KEGG: sus:Acid_5291 methyltransferase type 11 gene gene2861 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2815 Amir_2816 Amir_2816 Amir_2816 3244342 3245310 + NAD-dependent epimerase/dehydratase PFAM: NAD-dependent epimerase/dehydratase%3B Male sterility domain%3B 3-beta hydroxysteroid dehydrogenase/isomerase%3B short-chain dehydrogenase/reductase SDR%3B dTDP-4-dehydrorhamnose reductase~KEGG: nwi:Nwi_2406 NAD-dependent epimerase/dehydratase gene gene2862 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2816 Amir_2817 Amir_2817 Amir_2817 3245310 3246332 + Radical SAM domain protein PFAM: Radical SAM domain protein~KEGG: bma:BMAA1862 radical SAM domain-containing protein gene gene2863 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2817 Amir_2818 Amir_2818 Amir_2818 3246335 3247291 + hypothetical protein KEGG: smd:Smed_3106 hypothetical protein gene gene2864 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2818 Amir_2819 Amir_2819 Amir_2819 3247288 3248643 + glycosyl transferase group 1 PFAM: glycosyl transferase group 1~KEGG: scl:sce0549 glycogen synthase gene gene2865 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2819 Amir_2820 Amir_2820 Amir_2820 3248640 3249332 + LmbE family protein PFAM: LmbE family protein~KEGG: dar:Daro_1249 LmbE-like protein gene gene2866 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2820 Amir_2821 Amir_2821 Amir_2821 3249317 3250315 + UDP-glucose 4-epimerase TIGRFAM: UDP-glucose 4-epimerase~PFAM: NAD-dependent epimerase/dehydratase%3B 3-beta hydroxysteroid dehydrogenase/isomerase%3B Male sterility domain%3B KR domain protein%3B polysaccharide biosynthesis protein CapD%3B dTDP-4-dehydrorhamnose reductase%3B short- chain dehydrogenase/reductase SDR~KEGG: bcj:BCAM2033 putative UDP-glucose 4-epimerase gene gene2867 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2821 Amir_2822 Amir_2822 Amir_2822 3250306 3250977 + Phosphoglycerate mutase PFAM: Phosphoglycerate mutase~KEGG: afr:AFE_0621 phosphoglycerate mutase family protein gene gene2868 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2822 Amir_2823 Amir_2823 Amir_2823 3250974 3252506 + type I phosphodiesterase/nucleotide pyrophosphatase PFAM: type I phosphodiesterase/nucleotide pyrophosphatase~KEGG: predicted protein gene gene2869 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2823 Amir_2824 Amir_2824 Amir_2824 3252503 3253411 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: mch:Mchl_0500 ABC transporter related gene gene2870 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2824 Amir_2825 Amir_2825 Amir_2825 3253401 3254162 + ABC-2 type transporter PFAM: ABC-2 type transporter~KEGG: bte:BTH_I2328 transporter%2C putative gene gene2871 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2825 Amir_2826 Amir_2826 Amir_2826 3254217 3254456 + phosphopantetheine-binding PFAM: phosphopantetheine-binding~KEGG: pol:Bpro_3393 AMP-dependent synthetase and ligase gene gene2872 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2826 Amir_2827 Amir_2827 Amir_2827 3255158 3255334 + pseudogene gene2873 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2827 Amir_2828 Amir_2828 Amir_2828 3255291 3256208 - NmrA family protein PFAM: NmrA family protein%3B NAD-dependent epimerase/dehydratase~KEGG: mxa:MXAN_2144 NmrA-like family protein gene gene2874 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2828 Amir_2829 Amir_2829 Amir_2829 3256365 3256976 + regulatory protein TetR PFAM: regulatory protein TetR~KEGG: mxa:MXAN_2145 transcriptional regulator%2C TetR family gene gene2875 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2829 Amir_2830 Amir_2830 Amir_2830 3256957 3257991 - transcriptional regulator%2C LacI family KEGG: smd:Smed_4158 alanine racemase~PFAM: periplasmic binding protein/LacI transcriptional regulator%3B regulatory protein LacI~SMART: regulatory protein LacI gene gene2876 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2830 Amir_2831 Amir_2831 Amir_2831 3258637 3260526 + protein of unknown function DUF1680 PFAM: protein of unknown function DUF1680~KEGG: ret:RHE_CH03841 hypothetical protein gene gene2877 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2831 Amir_2832 Amir_2832 Amir_2832 3260564 3261817 + extracellular solute-binding protein family 1 PFAM: extracellular solute-binding protein family 1~KEGG: mlo:mlr2244 sugar binding protein of sugar ABC transporter gene gene2878 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2832 Amir_2833 Amir_2833 Amir_2833 3261825 3262772 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: sugar ABC transporter%3B K02025 multiple sugar transport system permease protein gene gene2879 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2833 Amir_2834 Amir_2834 Amir_2834 3262787 3263614 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: rle:RL4375 putative transmembrane component of ABC transporter gene gene2880 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2834 Amir_2835 Amir_2835 Amir_2835 3263676 3264551 + conserved hypothetical protein KEGG: hypothetical protein gene gene2881 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2835 Amir_2836 Amir_2836 Amir_2836 3264702 3266546 + protein of unknown function DUF1680 PFAM: protein of unknown function DUF1680~KEGG: hypothetical protein gene gene2882 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2836 Amir_2837 Amir_2837 Amir_2837 3266602 3267648 + glycoside hydrolase family 43 PFAM: glycoside hydrolase family 43~KEGG: scl:sce4598 endo-1%2C4-beta-xylanase gene gene2883 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2837 Amir_2838 Amir_2838 Amir_2838 3267645 3270485 + coagulation factor 5/8 type domain protein PFAM: coagulation factor 5/8 type domain protein~KEGG: xcv:XCV2729 putative secreted protein gene gene2884 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2838 Amir_2839 Amir_2839 Amir_2839 3270537 3272090 - TAP domain protein PFAM: TAP domain protein%3B alpha/beta hydrolase fold~KEGG: bph:Bphy_7397 TAP domain-containing protein gene gene2885 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2839 Amir_2840 Amir_2840 Amir_2840 3272204 3272539 - Ethyl tert-butyl ether degradation EthD PFAM: Ethyl tert-butyl ether degradation EthD~KEGG: cak:Caul_5271 ethyl tert-butyl ether degradation EthD gene gene2886 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2840 Amir_2841 Amir_2841 Amir_2841 3272689 3273066 + transcriptional regulator%2C MerR family PFAM: regulatory protein MerR~SMART: regulatory protein MerR~KEGG: bcr:BCAH187_A5339 transcriptional regulator%2C MerR family gene gene2887 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2841 Amir_2842 Amir_2842 Amir_2842 3273281 3274759 + transcriptional regulator%2C LuxR family PFAM: regulatory protein LuxR~SMART: regulatory protein LuxR~KEGG: acp:A2cp1_0906 transcriptional regulator%2C LuxR family gene gene2888 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2842 Amir_2843 Amir_2843 Amir_2843 3274711 3275091 - Endoribonuclease L-PSP PFAM: Endoribonuclease L-PSP~KEGG: bja:bll4888 hypothetical protein gene gene2889 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2843 Amir_2844 Amir_2844 Amir_2844 3275193 3275588 - hypothetical protein gene gene2890 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2844 Amir_2845 Amir_2845 Amir_2845 3275804 3276457 - transcriptional regulator%2C GntR family PFAM: GntR domain protein%3B regulatory protein GntR HTH~SMART: regulatory protein GntR HTH~KEGG: dvm:DvMF_1479 transcriptional regulator%2C GntR family gene gene2891 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2845 Amir_2846 Amir_2846 Amir_2846 3276471 3278195 - thiamine pyrophosphate protein TPP binding domain protein PFAM: thiamine pyrophosphate protein TPP binding domain protein%3B thiamine pyrophosphate protein central region%3B thiamine pyrophosphate protein domain protein TPP- binding~KEGG: rme:Rmet_5039 acetolactate synthase%2C large subunit gene gene2892 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2846 Amir_2847 Amir_2847 Amir_2847 3278192 3279709 - amidohydrolase KEGG: sal:Sala_2314 peptidase M20D%2C amidohydrolase~TIGRFAM: amidohydrolase~PFAM: peptidase M20%3B peptidase dimerization domain protein gene gene2893 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2847 Amir_2848 Amir_2848 Amir_2848 3279706 3280626 - Luciferase-like monooxygenase PFAM: Luciferase-like monooxygenase~KEGG: rpb:RPB_4411 luciferase-like gene gene2894 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2848 Amir_2849 Amir_2849 Amir_2849 3280623 3282509 - 5-oxoprolinase (ATP-hydrolyzing) PFAM: Hydantoinase B/oxoprolinase~KEGG: mes:Meso_3732 hydantoinase B/oxoprolinase gene gene2895 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2849 Amir_2850 Amir_2850 Amir_2850 3282502 3284574 - 5-oxoprolinase (ATP-hydrolyzing) PFAM: Hydantoinase/oxoprolinase%3B Hydantoinaseoxoprolinase domain protein~KEGG: mno:Mnod_8488 hydantoinase/oxoprolinase gene gene2896 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2850 Amir_2851 Amir_2851 Amir_2851 3284571 3285392 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: rle:pRL100063 putative ABC transporter permease component gene gene2897 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2851 Amir_2852 Amir_2852 Amir_2852 3285389 3286228 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: oca:OCAR_6772 ABC transporter gene gene2898 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2852 Amir_2853 Amir_2853 Amir_2853 3286225 3287322 - ABC transporter related PFAM: ABC transporter related%3B Transport-associated OB domain protein~SMART: AAA ATPase~KEGG: azc:AZC_2725 ABC transporter ATP-binding protein gene gene2899 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2853 Amir_2854 Amir_2854 Amir_2854 3287324 3288427 - putative spermidine/putrescine-binding periplasmic protein KEGG: bph:Bphy_6624 extracellular solute-binding protein gene gene2900 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2854 Amir_2855 Amir_2855 Amir_2855 3288721 3289413 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: mmw:Mmwyl1_4073 short-chain dehydrogenase/reductase SDR gene gene2901 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2855 Amir_2856 Amir_2856 Amir_2856 3289517 3290218 - hypothetical protein KEGG: hch:HCH_03068 lysophospholipase gene gene2902 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2856 Amir_2857 Amir_2857 Amir_2857 3290328 3291308 + Helix-turn-helix type 11 domain protein PFAM: Helix-turn-helix type 11 domain protein%3B protein of unknown function UPF0074~KEGG: pol:Bpro_0147 helix-turn-helix%2C type 11 gene gene2903 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2857 Amir_2858 Amir_2858 Amir_2858 3291609 3293006 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: eum:ECUMN_4826 conserved hypothetical protein mrx gene gene2904 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2858 Amir_2859 Amir_2859 Amir_2859 3293115 3293675 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: ccs:CCNA_02884 transcriptional regulator%2C TetR family gene gene2905 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2859 Amir_2860 Amir_2860 Amir_2860 3293698 3294435 - conserved hypothetical protein KEGG: mxa:MXAN_2224 hypothetical protein gene gene2906 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2860 Amir_2861 Amir_2861 Amir_2861 3294839 3295240 + hypothetical protein KEGG: similar to bromodomain adjacent to zinc finger domain%2C 1B%3B K11658 bromodomain adjacent to zinc finger domain protein 1B gene gene2907 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2861 Amir_2862 Amir_2862 Amir_2862 3295237 3296715 - Extracellular ligand-binding receptor PFAM: Extracellular ligand-binding receptor~KEGG: cvi:CV_0405 amino acid ABC transporter gene gene2908 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2862 Amir_2863 Amir_2863 Amir_2863 3296759 3298456 - hypothetical protein KEGG: hypothetical protein gene gene2909 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2863 Amir_2864 Amir_2864 Amir_2864 3298533 3299159 - pseudogene gene2910 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2864 Amir_2865 Amir_2865 Amir_2865 3299537 3302266 - conserved hypothetical protein KEGG: eca:ECA4303 hypothetical protein gene gene2911 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2865 Amir_2866 Amir_2866 Amir_2866 3302549 3302875 + hypothetical protein gene gene2912 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2866 Amir_2867 Amir_2867 Amir_2867 3302872 3303567 + hypothetical protein KEGG: mpo:Mpop_2368 GLUG domain protein gene gene2913 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2867 Amir_2868 Amir_2868 Amir_2868 3304515 3304679 - hypothetical protein gene gene2914 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2868 Amir_2869 Amir_2869 Amir_2869 3304757 3305023 - hypothetical protein gene gene2915 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2869 Amir_2870 Amir_2870 Amir_2870 3306210 3312644 + YD repeat protein TIGRFAM: YD repeat protein~KEGG: ypp:YPDSF_0222 membrane protein gene gene2916 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2870 Amir_2871 Amir_2871 Amir_2871 3313133 3314707 - Domain of unknown function DUF1814 PFAM: Domain of unknown function DUF1814~KEGG: scl:sce3078 hydrolase gene gene2917 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2871 Amir_2872 Amir_2872 Amir_2872 3314890 3315294 + Rare lipoprotein A PFAM: Rare lipoprotein A~KEGG: lipoprotein A domain-containing protein gene gene2918 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2872 Amir_2873 Amir_2873 Amir_2873 3315415 3316509 + periplasmic binding protein PFAM: periplasmic binding protein~KEGG: dsh:Dshi_0573 periplasmic binding protein gene gene2919 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2873 Amir_2874 Amir_2874 Amir_2874 3316506 3317588 + transport system permease protein PFAM: transport system permease protein~KEGG: rce:RC1_3860 hemin transport system permease protein HmuU%2C putative gene gene2920 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2874 Amir_2875 Amir_2875 Amir_2875 3317585 3318403 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: smt:Smal_1943 ABC transporter related gene gene2921 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2875 Amir_2876 Amir_2876 Amir_2876 3318403 3319500 + hypothetical protein KEGG: cti:RALTA_B2062 conserved hypothetical protein%3B putative exported protein gene gene2922 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2876 Amir_2877 Amir_2877 Amir_2877 3319497 3320540 + LPXTG-motif cell wall anchor domain protein TIGRFAM: LPXTG-motif cell wall anchor domain protein~PFAM: Htaa domain protein~KEGG: GJ12556 gene product from transcript GJ12556- RA gene gene2923 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2877 Amir_2878 Amir_2878 Amir_2878 3320578 3321714 - monooxygenase FAD-binding PFAM: monooxygenase FAD-binding~KEGG: gdj:Gdia_2837 monooxygenase FAD-binding gene gene2924 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2878 Amir_2879 Amir_2879 Amir_2879 3321789 3322469 + regulatory protein TetR PFAM: regulatory protein TetR%3B Tetracyclin repressor domain protein~KEGG: bur:Bcep18194_B0744 TetR family transcriptional regulator gene gene2925 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2879 Amir_2880 Amir_2880 Amir_2880 3322501 3323601 - protein of unknown function DUF916 cell surface putative PFAM: protein of unknown function DUF916 cell surface putative~KEGG: mex:Mext_2409 hypothetical protein gene gene2926 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2880 Amir_2881 Amir_2881 Amir_2881 3323661 3324998 - hypothetical protein KEGG: hypothetical protein gene gene2927 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2881 Amir_2882 Amir_2882 Amir_2882 3325147 3325743 - Phosphoribosylanthranilate isomerase PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI)~KEGG: mpt:Mpe_A2158 phosphoribosylanthranilate isomerase gene gene2928 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2882 Amir_2883 Amir_2883 Amir_2883 3325794 3326375 + HhH-GPD family protein TIGRFAM: HhH-GPD family protein~PFAM: HhH-GPD family protein gene gene2929 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2883 Amir_2884 Amir_2884 Amir_2884 3326437 3326726 - pseudogene gene2930 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2884 Amir_2885 Amir_2885 Amir_2885 3326757 3329027 + hypothetical protein KEGG: YALI0B09867p gene gene2931 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2885 Amir_2886 Amir_2886 Amir_2886 3329188 3330075 + conserved hypothetical protein KEGG: nar:Saro_1805 hypothetical protein gene gene2932 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2886 Amir_2887 Amir_2887 Amir_2887 3330390 3330704 - small multidrug resistance protein PFAM: small multidrug resistance protein~KEGG: pzu:PHZ_c0240 small multidrug resistance protein gene gene2933 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2887 Amir_2888 Amir_2888 Amir_2888 3331030 3332478 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: sal:Sala_0898 major facilitator transporter gene gene2934 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2888 Amir_2889 Amir_2889 Amir_2889 3332639 3333322 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: pla:Plav_0388 TetR family transcriptional regulator gene gene2935 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2889 Amir_2890 Amir_2890 Amir_2890 3333994 3334248 + hypothetical protein KEGG: cell wall protein gene gene2936 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2890 Amir_2891 Amir_2891 Amir_2891 3334245 3334955 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: swi:Swit_1768 regulatory protein%2C TetR gene gene2937 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2891 Amir_2892 Amir_2892 Amir_2892 3334952 3335152 + protein of unknown function DUF1271 PFAM: protein of unknown function DUF1271~KEGG: bxe:Bxe_C0944 putative ferredoxin gene gene2938 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2892 Amir_2893 Amir_2893 Amir_2893 3335149 3336585 + FAD-dependent pyridine nucleotide-disulphide oxidoreductase PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase~KEGG: met:M446_4600 cyclic nucleotide-binding protein gene gene2939 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2893 Amir_2894 Amir_2894 Amir_2894 3336582 3337805 + cytochrome P450 PFAM: cytochrome P450~KEGG: bxe:Bxe_C0945 putative cytochrome P450 gene gene2940 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2894 Amir_2895 Amir_2895 Amir_2895 3337898 3339103 + cytochrome P450 PFAM: cytochrome P450~KEGG: CYP55B1%3B cytochrome P450%2C nitric oxide reductase gene gene2941 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2895 Amir_2896 Amir_2896 Amir_2896 3339117 3340109 + glycosyltransferase%2C MGT family TIGRFAM: glycosyltransferase%2C MGT family~PFAM: protein of unknown function DUF1205%3B glycosyl transferase family 28%3B Glycosyltransferase 28 domain~KEGG: ses:SARI_00205 hypothetical protein gene gene2942 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2896 Amir_2897 Amir_2897 Amir_2897 3340812 3342527 + histidine kinase PFAM: histidine kinase A domain protein%3B histidine kinase HAMP region domain protein%3B ATP-binding region ATPase domain protein~SMART: histidine kinase A domain protein%3B histidine kinase HAMP region domain protein~KEGG: bxe:Bxe_A0786 putative lipoprotein gene gene2943 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2897 Amir_2898 Amir_2898 Amir_2898 3342548 3343396 - transcriptional regulator%2C MerR family PFAM: regulatory protein MerR~SMART: regulatory protein MerR~KEGG: bcz:pE33L466_0331 MerR family transcriptional regulator gene gene2944 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2898 Amir_2899 Amir_2899 Amir_2899 3343645 3345093 - amidohydrolase PFAM: amidohydrolase%3B Amidohydrolase 3~KEGG: reu:Reut_C6231 hypothetical protein gene gene2945 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2899 Amir_2900 Amir_2900 Amir_2900 3345176 3345781 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: xau:Xaut_3070 TetR family transcriptional regulator gene gene2946 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2900 Amir_2901 Amir_2901 Amir_2901 3345848 3347203 - AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: pen:PSEEN2716 non-ribosomal peptide synthetase gene gene2947 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2901 Amir_2902 Amir_2902 Amir_2902 3347249 3348001 + pseudogene gene2948 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2902 Amir_2903 Amir_2903 Amir_2903 3348134 3348498 + pseudogene gene2949 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2903 Amir_2904 Amir_2904 Amir_2904 3348503 3349229 + pseudogene gene2950 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2904 Amir_2905 Amir_2905 Amir_2905 3349276 3350643 + pseudogene gene2951 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2905 Amir_2906 Amir_2906 Amir_2906 3350643 3350981 + pseudogene gene2952 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2906 Amir_2907 Amir_2907 Amir_2907 3351047 3352924 + hypothetical protein KEGG: GD20599 gene product from transcript GD20599- RA gene gene2953 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2907 Amir_2908 Amir_2908 Amir_2908 3352971 3354476 - extracellular solute-binding protein family 5 PFAM: extracellular solute-binding protein family 5~KEGG: extracellular solute-binding protein%3B K02035 peptide/nickel transport system substrate-binding protein gene gene2954 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2908 Amir_2909 Amir_2909 Amir_2909 3355008 3358358 + hypothetical protein KEGG: efe:EFER_2201 putative molybdate metabolism regulator (MolR) gene gene2955 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2909 Amir_2910 Amir_2910 Amir_2910 3358541 3360892 - multi-sensor signal transduction histidine kinase PFAM: ATP-binding region ATPase domain protein%3B GAF domain protein%3B PAS fold-2 domain protein%3B histidine kinase A domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B GAF domain protein~KEGG: sml:Smlt2382 putative two-component sensor histidine kinase protein gene gene2956 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2910 Amir_2911 Amir_2911 Amir_2911 3361009 3362985 + protein serine/threonine phosphatase PFAM: Stage II sporulation E family protein~SMART: protein phosphatase 2C domain protein~KEGG: sus:Acid_5974 serine phosphatase gene gene2957 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2911 Amir_2912 Amir_2912 Amir_2912 3362964 3363389 + response regulator receiver protein PFAM: response regulator receiver~SMART: response regulator receiver~KEGG: mag:amb3470 FOG: CheY-like receiver gene gene2958 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2912 Amir_2913 Amir_2913 Amir_2913 3363559 3363855 + hypothetical protein gene gene2959 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2913 Amir_2914 Amir_2914 Amir_2914 3363903 3365779 + pseudogene gene2960 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2914 Amir_2915 Amir_2915 Amir_2915 3366125 3366565 + transcriptional regulator%2C HxlR family PFAM: helix-turn-helix HxlR type~KEGG: mxa:MXAN_5099 putative transcriptional regulator gene gene2961 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2915 Amir_2916 Amir_2916 Amir_2916 3366690 3367475 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B KR domain protein~KEGG: cak:Caul_1370 short-chain dehydrogenase/reductase SDR gene gene2962 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2916 Amir_2917 Amir_2917 Amir_2917 3367435 3368103 - conserved hypothetical protein KEGG: hypothetical protein LOC686639 gene gene2963 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2917 Amir_2918 Amir_2918 Amir_2918 3368109 3368981 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: rle:pRL120663 putative permease component of ABC transporter gene gene2964 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2918 Amir_2919 Amir_2919 Amir_2919 3368978 3369910 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ABC transporter membrane spanning protein (sugar)%3B K02025 multiple sugar transport system permease protein gene gene2965 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2919 Amir_2920 Amir_2920 Amir_2920 3369915 3371189 - extracellular solute-binding protein family 1 PFAM: extracellular solute-binding protein family 1~KEGG: rle:pRL120659 putative substrate-binding component of ABC transporter gene gene2966 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2920 Amir_2921 Amir_2921 Amir_2921 3371235 3373190 - conserved hypothetical protein KEGG: ret:RHE_CH00075 hypothetical protein gene gene2967 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2921 Amir_2922 Amir_2922 Amir_2922 3373187 3374167 - D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding~KEGG: rlt:Rleg2_4009 D-isomer specific 2- hydroxyacid dehydrogenase NAD-binding gene gene2968 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2922 Amir_2923 Amir_2923 Amir_2923 3374356 3375444 + regulatory protein DeoR PFAM: regulatory protein DeoR%3B periplasmic binding protein/LacI transcriptional regulator~SMART: regulatory protein DeoR~KEGG: ppw:PputW619_1959 LacI family transcription regulator gene gene2969 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2923 Amir_2924 Amir_2924 Amir_2924 3375820 3376701 + conserved hypothetical protein PFAM: conserved hypothetical protein~KEGG: ade:Adeh_2416 hypothetical protein gene gene2970 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2924 Amir_2925 Amir_2925 Amir_2925 3376705 3378711 - transcriptional regulator%2C SARP family PFAM: transcriptional activator domain%3B transcriptional regulator domain protein~KEGG: afw:Anae109_3347 transcriptional activator domain-containing protein gene gene2971 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2925 Amir_2926 Amir_2926 Amir_2926 3378911 3379252 + hypothetical protein gene gene2972 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2926 Amir_2927 Amir_2927 Amir_2927 3379249 3379506 + hypothetical protein gene gene2973 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2927 Amir_2928 Amir_2928 Amir_2928 3380126 3380290 + hypothetical protein gene gene2974 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2928 Amir_2929 Amir_2929 Amir_2929 3380342 3381685 - hypothetical protein KEGG: GM17356 gene product from transcript GM17356- RA gene gene2975 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2929 Amir_2930 Amir_2930 Amir_2930 3381835 3382461 + transcriptional regulator%2C LuxR family PFAM: regulatory protein LuxR~SMART: regulatory protein LuxR~KEGG: bcy:Bcer98_1160 two component LuxR family transcriptional regulator gene gene2976 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2930 Amir_2931 Amir_2931 Amir_2931 3382591 3385680 + WD40 domain protein beta Propeller PFAM: WD40 domain protein beta Propeller~KEGG: ade:Adeh_2230 hypothetical protein gene gene2977 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2931 Amir_2932 Amir_2932 Amir_2932 3385733 3386458 + hypothetical protein KEGG: plu:plu1715 hypothetical protein gene gene2978 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2932 Amir_2933 Amir_2933 Amir_2933 3386532 3388601 + AAA ATPase central domain protein PFAM: AAA ATPase central domain protein~SMART: AAA ATPase~KEGG: noc:Noc_1879 AAA ATPase gene gene2979 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2933 Amir_2934 Amir_2934 Amir_2934 3388642 3389502 - hypothetical protein KEGG: aci:ACIAD3520 hypothetical protein gene gene2980 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2934 Amir_2935 Amir_2935 Amir_2935 3389649 3390107 + hypothetical protein gene gene2981 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2935 Amir_2936 Amir_2936 Amir_2936 3390127 3393291 - transcriptional regulator%2C SARP family PFAM: transcriptional activator domain%3B TPR repeat- containing protein%3B Tetratricopeptide TPR_4%3B transcriptional regulator domain protein%3B Tetratricopeptide TPR_2 repeat protein~SMART: Tetratricopeptide domain protein~KEGG: scl:sce6858 hypothetical protein gene gene2982 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2936 Amir_2937 Amir_2937 Amir_2937 3393516 3393725 + pseudouridine synthase KEGG: bpy:Bphyt_1629 pseudouridine synthase gene gene2983 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2937 Amir_2938 Amir_2938 Amir_2938 3394111 3395640 + tail sheath protein PFAM: tail sheath protein~KEGG: mlo:mlr6548 hypothetical protein gene gene2984 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2938 Amir_2939 Amir_2939 Amir_2939 3395687 3396127 + conserved hypothetical protein TIGRFAM: conserved hypothetical protein~KEGG: gsu:GSU0979 hypothetical protein gene gene2985 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2939 Amir_2940 Amir_2940 Amir_2940 3396124 3396624 + hypothetical protein KEGG: gsu:GSU0977 hypothetical protein gene gene2986 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2940 Amir_2941 Amir_2941 Amir_2941 3396621 3396779 + conserved hypothetical protein KEGG: mlo:msr6553 hypothetical protein gene gene2987 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2941 Amir_2942 Amir_2942 Amir_2942 3396884 3399646 + hypothetical protein KEGG: proteophosphoglycan 5 gene gene2988 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2942 Amir_2943 Amir_2943 Amir_2943 3399697 3400122 + conserved hypothetical protein TIGRFAM: conserved hypothetical protein~KEGG: noc:Noc_1873 phage tail region protein gene gene2989 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2943 Amir_2944 Amir_2944 Amir_2944 3400147 3400857 + Peptidoglycan-binding LysM PFAM: Peptidoglycan-binding LysM~KEGG: gsu:GSU0981 hypothetical protein gene gene2990 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2944 Amir_2945 Amir_2945 Amir_2945 3400854 3402623 + Rhs element Vgr protein TIGRFAM: Rhs element Vgr protein~PFAM: Rhs element Vgr protein~KEGG: gbm:Gbem_2550 rhs element Vgr protein gene gene2991 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2945 Amir_2946 Amir_2946 Amir_2946 3402657 3402968 + PAAR repeat-containing protein PFAM: PAAR repeat-containing protein~KEGG: sde:Sde_1043 hypothetical protein gene gene2992 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2946 Amir_2947 Amir_2947 Amir_2947 3402965 3403372 + GPW/gp25 family protein PFAM: GPW/gp25 family protein~KEGG: gsu:GSU0986 tail lysozyme%2C putative gene gene2993 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2947 Amir_2948 Amir_2948 Amir_2948 3403372 3405324 + conserved hypothetical protein KEGG: gsu:GSU0988 hypothetical protein gene gene2994 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2948 Amir_2949 Amir_2949 Amir_2949 3405321 3405896 + phage tail protein TIGRFAM: phage tail protein~KEGG: rsq:Rsph17025_4353 hypothetical protein gene gene2995 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2949 Amir_2950 Amir_2950 Amir_2950 3406304 3407299 + hypothetical protein KEGG: similar to Enabled protein homolog%3B K05746 enabled gene gene2996 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2950 Amir_2951 Amir_2951 Amir_2951 3407328 3408353 + NAD-dependent epimerase/dehydratase PFAM: NAD-dependent epimerase/dehydratase~KEGG: mgm:Mmc1_2871 NAD-dependent epimerase/dehydratase gene gene2997 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2951 Amir_2952 Amir_2952 Amir_2952 3408427 3409050 + transcriptional regulator%2C LuxR family PFAM: regulatory protein LuxR~SMART: regulatory protein LuxR~KEGG: bcy:Bcer98_0214 two component LuxR family transcriptional regulator gene gene2998 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2952 Amir_2953 Amir_2953 Amir_2953 3409052 3409291 + hypothetical protein gene gene2999 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2953 Amir_2954 Amir_2954 Amir_2954 3409582 3413022 - transcriptional regulator%2C putative ATPase%2C winged helix family PFAM: transcriptional activator domain%3B Tetratricopeptide TPR_4%3B transcriptional regulator domain protein~KEGG: afw:Anae109_3347 transcriptional activator domain-containing protein gene gene3000 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2954 Amir_2955 Amir_2955 Amir_2955 3413019 3413336 - conserved hypothetical protein KEGG: bbr:BB2134 hypothetical protein gene gene3001 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2955 Amir_2956 Amir_2956 Amir_2956 3413350 3417369 - transcriptional regulator%2C putative ATPase%2C winged helix family PFAM: transcriptional activator domain%3B transcriptional regulator domain protein~KEGG: bpm:BURPS1710b_1102 putative lipoprotein gene gene3002 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2956 Amir_2957 Amir_2957 Amir_2957 3418122 3418556 + UspA domain protein PFAM: UspA domain protein~KEGG: hha:Hhal_2190 UspA domain protein gene gene3003 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2957 Amir_2958 Amir_2958 Amir_2958 3418810 3419277 + hypothetical protein gene gene3004 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2958 Amir_2959 Amir_2959 Amir_2959 3419337 3420461 + NADH:flavin oxidoreductase/NADH oxidase PFAM: NADH:flavin oxidoreductase/NADH oxidase~KEGG: pat:Patl_1928 NADH:flavin oxidoreductase/NADH oxidase gene gene3005 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2959 Amir_2960 Amir_2960 Amir_2960 3420792 3421010 + hypothetical protein gene gene3006 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2960 Amir_2961 Amir_2961 Amir_2961 3421087 3421671 - hypothetical protein KEGG: cvi:CV_3666 acetyltransferase gene gene3007 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2961 Amir_2962 Amir_2962 Amir_2962 3421661 3422005 - hypothetical protein KEGG: GM10273 gene product from transcript GM10273- RA gene gene3008 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2962 Amir_2963 Amir_2963 Amir_2963 3422077 3422538 - hypothetical protein gene gene3009 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2963 Amir_2964 Amir_2964 Amir_2964 3423093 3425117 + DNA ligase%2C NAD-dependent KEGG: cti:RALTA_A1696 DNA ligase~TIGRFAM: DNA ligase%2C NAD-dependent~PFAM: NAD-dependent DNA ligase adenylation%3B NAD- dependent DNA ligase OB-fold~SMART: NAD-dependent DNA ligase%3B BRCT domain protein%3B Helix-hairpin-helix DNA-binding class 1 gene gene3010 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2964 Amir_2965 Amir_2965 Amir_2965 3425357 3427974 - pseudogene gene3011 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2965 Amir_2966 Amir_2966 Amir_2966 3428249 3431500 + hypothetical protein KEGG: mrd:Mrad2831_1394 WGR domain-containing protein gene gene3012 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2966 Amir_2967 Amir_2967 Amir_2967 3431766 3432920 - aminotransferase class I and II PFAM: aminotransferase class I and II~KEGG: dvl:Dvul_2797 aminotransferase%2C class I and II gene gene3013 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2967 Amir_2968 Amir_2968 Amir_2968 3432871 3434229 + hypothetical protein KEGG: xca:xccb100_4160 putative secreted hydrolase gene gene3014 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2968 Amir_2969 Amir_2969 Amir_2969 3434570 3435088 + putative signal transduction histidine kinase PFAM: ATP-binding region ATPase domain protein~KEGG: mpt:Mpe_A0358 two-component sensor histidine kinase-like protein gene gene3015 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2969 Amir_2970 Amir_2970 Amir_2970 3435371 3436999 + TAP domain protein PFAM: TAP domain protein%3B alpha/beta hydrolase fold~KEGG: sde:Sde_0644 hypothetical protein gene gene3016 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2970 Amir_2971 Amir_2971 Amir_2971 3437157 3438014 + hypothetical protein KEGG: hypothetical protein%3B K10592 E3 ubiquitin- protein ligase HUWE1 gene gene3017 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2971 Amir_2972 Amir_2972 Amir_2972 3438326 3439063 + Xylose isomerase domain protein TIM barrel PFAM: Xylose isomerase domain protein TIM barrel~KEGG: lch:Lcho_4327 xylose isomerase domain- containing protein gene gene3018 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2972 Amir_2973 Amir_2973 Amir_2973 3439060 3440160 + oxidoreductase domain protein PFAM: oxidoreductase domain protein%3B Oxidoreductase domain~KEGG: rec:RHECIAT_CH0002098 putative dehydrogenase protein gene gene3019 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2973 Amir_2974 Amir_2974 Amir_2974 3440231 3440830 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: pst:PSPTO_3319 TetR family transcriptional regulator gene gene3020 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2974 Amir_2975 Amir_2975 Amir_2975 3440915 3441352 - hypothetical protein gene gene3021 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2975 Amir_2976 Amir_2976 Amir_2976 3441467 3441955 - NUDIX hydrolase PFAM: NUDIX hydrolase~KEGG: bce:BC3339 phosphohydrolase (MutT/NUDIX family protein) gene gene3022 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2976 Amir_2977 Amir_2977 Amir_2977 3442342 3442932 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: psb:Psyr_3154 regulatory protein%2C TetR gene gene3023 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2977 Amir_2978 Amir_2978 Amir_2978 3442929 3444758 - Xylan 1%2C4-beta-xylosidase PFAM: glycoside hydrolase family 3 domain protein~KEGG: beta-glucosidase-related glycosidases gene gene3024 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2978 Amir_2979 Amir_2979 Amir_2979 3444924 3446189 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1%3B General substrate transporter~KEGG: floR%3B florfenicol/chloramphenicol resistance transporter protein gene gene3025 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2979 Amir_2980 Amir_2980 Amir_2980 3446316 3447131 + transcriptional regulator%2C XRE family SMART: helix-turn-helix domain protein~KEGG: rle:RL4049 hypothetical protein gene gene3026 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2980 Amir_2981 Amir_2981 Amir_2981 3447220 3448005 + protein of unknown function DUF1684 PFAM: protein of unknown function DUF1684~KEGG: acp:A2cp1_0109 protein of unknown function DUF1684 gene gene3027 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2981 Amir_2982 Amir_2982 Amir_2982 3448316 3448660 - hypothetical protein KEGG: eli:ELI_10905 hypothetical protein gene gene3028 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2982 Amir_2983 Amir_2983 Amir_2983 3448844 3450121 + extracellular solute-binding protein family 1 PFAM: extracellular solute-binding protein family 1~KEGG: sugar ABC transporter gene gene3029 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2983 Amir_2984 Amir_2984 Amir_2984 3450118 3451035 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: sugar ABC transporter%3B K02025 multiple sugar transport system permease protein gene gene3030 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2984 Amir_2985 Amir_2985 Amir_2985 3451035 3451847 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: rec:RHECIAT_PC0000203 putative sugar ABC transporter%2C permease protein gene gene3031 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2985 Amir_2986 Amir_2986 Amir_2986 3451844 3454093 + glycoside hydrolase family 31 PFAM: glycoside hydrolase family 31~KEGG: bha:BH1905 alpha-xylosidase YicI gene gene3032 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2986 Amir_2987 Amir_2987 Amir_2987 3454204 3455175 - transcriptional regulator%2C ArsR family PFAM: regulatory protein ArsR~SMART: regulatory protein ArsR~KEGG: mmr:Mmar10_0065 ArsR family transcriptional regulator gene gene3033 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2987 Amir_2988 Amir_2988 Amir_2988 3455322 3456308 - transcriptional regulator%2C LacI family PFAM: regulatory protein LacI~SMART: regulatory protein LacI~KEGG: bam:Bamb_4929 LacI family transcription regulator gene gene3034 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2988 Amir_2989 Amir_2989 Amir_2989 3456484 3456630 + hypothetical protein gene gene3035 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2989 Amir_2990 Amir_2990 Amir_2990 3457371 3459527 + hypothetical protein KEGG: bcb:BCB4264_A3230 hypothetical cytosolic protein gene gene3037 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2990 Amir_2991 Amir_2991 Amir_2991 3459797 3460516 + conserved hypothetical protein KEGG: dol:Dole_2720 hypothetical protein gene gene3038 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2991 Amir_2992 Amir_2992 Amir_2992 3460625 3461191 + transcriptional regulator%2C XRE family PFAM: helix-turn-helix domain protein%3B Cupin 2 conserved barrel domain protein~SMART: helix-turn-helix domain protein~KEGG: transcriptional regulator protein gene gene3039 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2992 Amir_2993 Amir_2993 Amir_2993 3461305 3462192 + Methyltransferase type 12 PFAM: Methyltransferase type 12%3B Methyltransferase type 11~KEGG: acp:A2cp1_1436 methyltransferase type 11 gene gene3040 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2993 Amir_2994 Amir_2994 Amir_2994 3462234 3462947 + hypothetical protein KEGG: hch:HCH_03879 hypothetical protein gene gene3041 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2994 Amir_2995 Amir_2995 Amir_2995 3462954 3463607 + hypothetical protein gene gene3042 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2995 Amir_2996 Amir_2996 Amir_2996 3463655 3464662 - alpha/beta hydrolase fold protein PFAM: alpha/beta hydrolase fold~KEGG: bcj:BCAM1529 putative hydrolase gene gene3043 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2996 Amir_2997 Amir_2997 Amir_2997 3464694 3465161 - protein of unknown function DUF664 PFAM: protein of unknown function DUF664 gene gene3044 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2997 Amir_2998 Amir_2998 Amir_2998 3465183 3465794 - Methyltransferase type 11 PFAM: Methyltransferase type 11%3B Tellurite resistance methyltransferase%2C TehB%2C core%3B thiopurine S- methyltransferase%3B Methyltransferase type 12~KEGG: methyltransferase type 12 gene gene3045 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2998 Amir_2999 Amir_2999 Amir_2999 3465882 3466484 + transcriptional regulator%2C XRE family PFAM: helix-turn-helix domain protein%3B Cupin 2 conserved barrel domain protein~SMART: helix-turn-helix domain protein~KEGG: reh:H16_B1998 transcriptional regulator%2C XRE- family gene gene3046 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_2999 Amir_3000 Amir_3000 Amir_3000 3466536 3467354 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: rso:RSc0215 short chain dehydrogenase gene gene3047 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3000 Amir_3001 Amir_3001 Amir_3001 3467421 3468044 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: afw:Anae109_0884 TetR family transcriptional regulator gene gene3048 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3001 Amir_3002 Amir_3002 Amir_3002 3468612 3469730 + Exonuclease RNase T and DNA polymerase III PFAM: Exonuclease RNase T and DNA polymerase III~SMART: Exonuclease~KEGG: tmz:Tmz1t_2342 exonuclease RNase T and DNA polymerase III gene gene3049 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3002 Amir_3003 Amir_3003 Amir_3003 3469770 3470789 + transcriptional regulator%2C MerR family PFAM: regulatory protein MerR%3B Transcription regulator MerR DNA binding~SMART: regulatory protein MerR~KEGG: cja:CJA_2025 MerR-family transcriptional regulator gene gene3050 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3003 Amir_3004 Amir_3004 Amir_3004 3470839 3471510 - two component transcriptional regulator%2C LuxR family PFAM: response regulator receiver%3B regulatory protein LuxR%3B Sigma-70 region 4 type 2~SMART: response regulator receiver%3B regulatory protein LuxR~KEGG: scl:sce5431 two-component system response regulator gene gene3051 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3004 Amir_3005 Amir_3005 Amir_3005 3471507 3472670 - histidine kinase PFAM: histidine kinase dimerization and phosphoacceptor region%3B ATP-binding region ATPase domain protein~KEGG: scl:sce5432 putative two-component system sensor kinase gene gene3052 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3005 Amir_3006 Amir_3006 Amir_3006 3472791 3473564 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: aba:Acid345_0970 ABC transporter%2C ATPase subunit gene gene3053 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3006 Amir_3007 Amir_3007 Amir_3007 3473564 3475969 + protein of unknown function DUF214 PFAM: protein of unknown function DUF214~KEGG: aeh:Mlg_1312 hypothetical protein gene gene3054 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3007 Amir_3008 Amir_3008 Amir_3008 3476013 3477188 - type I phosphodiesterase/nucleotide pyrophosphatase PFAM: type I phosphodiesterase/nucleotide pyrophosphatase%3B PglZ domain protein~KEGG: tbd:Tbd_1468 hypothetical protein gene gene3055 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3008 Amir_3009 Amir_3009 Amir_3009 3477602 3479269 + alpha amylase catalytic region PFAM: alpha amylase catalytic region~SMART: alpha amylase catalytic sub domain~KEGG: lch:Lcho_3323 alpha amylase catalytic region gene gene3056 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3009 Amir_3010 Amir_3010 Amir_3010 3479435 3479821 + conserved hypothetical protein KEGG: pag:PLES_32071 hypothetical protein gene gene3057 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3010 Amir_3011 Amir_3011 Amir_3011 3480056 3480805 - NADP oxidoreductase coenzyme F420-dependent PFAM: NADP oxidoreductase coenzyme F420-dependent%3B 6-phosphogluconate dehydrogenase NAD-binding~KEGG: afw:Anae109_2808 NADP oxidoreductase coenzyme F420-dependent gene gene3058 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3011 Amir_3012 Amir_3012 Amir_3012 3480917 3481576 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: bbt:BBta_0873 TetR family transcriptional regulator gene gene3059 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3012 Amir_3013 Amir_3013 Amir_3013 3482195 3482704 + hypothetical protein gene gene3060 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3013 Amir_3014 Amir_3014 Amir_3014 3483618 3484118 + hypothetical protein gene gene3061 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3014 Amir_3015 Amir_3015 Amir_3015 3484096 3485427 - sodium/calcium exchanger membrane region PFAM: sodium/calcium exchanger membrane region~KEGG: dvl:Dvul_0633 sodium/calcium exchanger membrane region gene gene3062 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3015 Amir_3016 Amir_3016 Amir_3016 3485551 3486378 + FAD-binding 9 siderophore-interacting domain protein PFAM: FAD-binding 9 siderophore-interacting domain protein%3B Siderophore-interacting protein~KEGG: pag:PLES_28941 SIP gene gene3063 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3016 Amir_3017 Amir_3017 Amir_3017 3486528 3487287 + pseudogene gene3064 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3017 Amir_3018 Amir_3018 Amir_3018 3487470 3488300 - phenazine biosynthesis protein PhzF family TIGRFAM: phenazine biosynthesis protein PhzF family~PFAM: Phenazine biosynthesis PhzC/PhzF protein~KEGG: acr:Acry_0325 PhzF family phenazine biosynthesis protein gene gene3065 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3018 Amir_3019 Amir_3019 Amir_3019 3488359 3488982 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: bmu:Bmul_5991 TetR family transcriptional regulator gene gene3066 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3019 Amir_3020 Amir_3020 Amir_3020 3489110 3489667 + NADPH-dependent FMN reductase PFAM: NADPH-dependent FMN reductase%3B NAD(P)H dehydrogenase (quinone)~KEGG: rsp:RSP_3069 NADPH-dependent FMN reductase gene gene3067 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3020 Amir_3021 Amir_3021 Amir_3021 3489781 3493725 + WGR domain protein PFAM: WGR domain protein~SMART: WGR domain protein~KEGG: mrd:Mrad2831_1394 WGR domain-containing protein gene gene3068 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3021 Amir_3022 Amir_3022 Amir_3022 3493870 3494058 - hypothetical protein gene gene3069 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3022 Amir_3023 Amir_3023 Amir_3023 3494051 3494509 - hypothetical protein KEGG: gme:Gmet_1196 PASTA gene gene3070 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3023 Amir_3024 Amir_3024 Amir_3024 3494948 3495733 + Inositol-phosphate phosphatase PFAM: inositol monophosphatase~KEGG: mgm:Mmc1_0078 inositol-phosphate phosphatase gene gene3071 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3024 Amir_3025 Amir_3025 Amir_3025 3495991 3497850 + ABC transporter transmembrane region PFAM: ABC transporter transmembrane region%3B ABC transporter related~KEGG: mpo:Mpop_2313 lipid A ABC exporter family%2C fused ATPase and inner membrane subunits gene gene3072 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3025 Amir_3026 Amir_3026 Amir_3026 3497847 3499679 + ABC transporter related PFAM: ABC transporter related%3B ABC transporter transmembrane region~SMART: AAA ATPase~KEGG: maq:Maqu_2187 ABC transporter related gene gene3073 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3026 Amir_3027 Amir_3027 Amir_3027 3500217 3500906 - glycoside hydrolase family 12 PFAM: glycoside hydrolase family 12~KEGG: bja:blr1964 hypothetical protein gene gene3074 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3027 Amir_3028 Amir_3028 Amir_3028 3501226 3502983 - avirulence protein KEGG: xcb:XC_4318 avirulence protein gene gene3075 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3028 Amir_3029 Amir_3029 Amir_3029 3503343 3503639 + hypothetical protein KEGG: similar to DNA Helicase gene gene3076 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3029 Amir_3030 Amir_3030 Amir_3030 3503718 3504125 - hypothetical protein gene gene3077 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3030 Amir_3031 Amir_3031 Amir_3031 3504246 3504638 + GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: swi:Swit_1410 GCN5-related N- acetyltransferase gene gene3078 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3031 Amir_3032 Amir_3032 Amir_3032 3504730 3506376 + kinase-like protein KEGG: rsh:Rsph17029_3222 hypothetical protein gene gene3079 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3032 Amir_3033 Amir_3033 Amir_3033 3506376 3509063 + Endonuclease/exonuclease/phosphatase PFAM: Endonuclease/exonuclease/phosphatase%3B Phosphoesterase HXTX%3B DNA polymerase beta domain protein region~KEGG: scl:sce0152 polynucleotide adenyltransferase gene gene3080 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3033 Amir_3034 Amir_3034 Amir_3034 3509072 3509533 - hypothetical protein KEGG: rle:RL3033 hypothetical protein gene gene3081 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3034 Amir_3035 Amir_3035 Amir_3035 3509530 3510099 - hypothetical protein gene gene3082 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3035 Amir_3036 Amir_3036 Amir_3036 3510373 3510984 - protein of unknown function DUF162 PFAM: protein of unknown function DUF162~KEGG: eba:ebA3914 hypothetical protein gene gene3083 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3036 Amir_3037 Amir_3037 Amir_3037 3511476 3512879 - protein of unknown function DUF162 PFAM: protein of unknown function DUF162~KEGG: rru:Rru_A1412 4Fe-4S ferredoxin%2C iron-sulfur binding gene gene3084 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3037 Amir_3038 Amir_3038 Amir_3038 3512891 3513631 - protein of unknown function DUF224 cysteine-rich region domain protein PFAM: protein of unknown function DUF224 cysteine- rich region domain protein~KEGG: sus:Acid_5763 hypothetical protein gene gene3085 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3038 Amir_3039 Amir_3039 Amir_3039 3513640 3514395 + GntR domain protein PFAM: GntR domain protein%3B regulatory protein GntR HTH~SMART: regulatory protein GntR HTH~KEGG: scl:sce0751 GntR family transcriptional regulator gene gene3086 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3039 Amir_3040 Amir_3040 Amir_3040 3514866 3515885 - transcriptional regulator%2C LacI family PFAM: periplasmic binding protein/LacI transcriptional regulator%3B regulatory protein LacI~SMART: regulatory protein LacI~KEGG: ppw:PputW619_1959 LacI family transcription regulator gene gene3087 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3040 Amir_3041 Amir_3041 Amir_3041 3516064 3517566 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: bph:Bphy_3463 ABC transporter related gene gene3088 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3041 Amir_3042 Amir_3042 Amir_3042 3517563 3518585 + Monosaccharide-transporting ATPase PFAM: inner-membrane translocator~KEGG: bac:BamMC406_1213 monosaccharide-transporting ATPase gene gene3089 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3042 Amir_3043 Amir_3043 Amir_3043 3518575 3519564 + Monosaccharide-transporting ATPase PFAM: inner-membrane translocator~KEGG: bxe:Bxe_B1037 ABC sugar transporter%2C inner membrane subunit gene gene3090 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3043 Amir_3044 Amir_3044 Amir_3044 3519594 3520670 + rhamnose ABC transporter%2C periplasmic rhamnose- binding protein TIGRFAM: rhamnose ABC transporter%2C periplasmic rhamnose-binding protein~KEGG: bph:Bphy_3460 rhamnose ABC transporter%2C periplasmic rhamnose-binding protein gene gene3091 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3044 Amir_3045 Amir_3045 Amir_3045 3520733 3521923 + L-rhamnose isomerase TIGRFAM: L-rhamnose isomerase~PFAM: Xylose isomerase domain protein TIM barrel~KEGG: acr:Acry_2987 L-rhamnose isomerase gene gene3092 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3045 Amir_3046 Amir_3046 Amir_3046 3521926 3523956 + rhamnulose-1-phosphate aldolase/alcohol dehydrogenase TIGRFAM: rhamnulose-1-phosphate aldolase/alcohol dehydrogenase~PFAM: class II aldolase/adducin family protein%3B KR domain protein%3B short-chain dehydrogenase/reductase SDR%3B NAD-dependent epimerase/dehydratase~KEGG: rde:RD1_3083 short chain dehydrogenase gene gene3093 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3046 Amir_3047 Amir_3047 Amir_3047 3523969 3525375 + carbohydrate kinase FGGY PFAM: carbohydrate kinase FGGY~KEGG: sus:Acid_3424 carbohydrate kinase%2C FGGY gene gene3094 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3047 Amir_3048 Amir_3048 Amir_3048 3525392 3525721 + glyoxalase/bleomycin resistance protein/dioxygenase KEGG: smt:Smal_1180 glyoxalase/bleomycin resistance protein/dioxygenase gene gene3095 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3048 Amir_3049 Amir_3049 Amir_3049 3525753 3526997 - amidohydrolase PFAM: amidohydrolase%3B Amidohydrolase 3~KEGG: azc:AZC_1412 hypothetical protein gene gene3096 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3049 Amir_3050 Amir_3050 Amir_3050 3527106 3527465 - conserved hypothetical protein KEGG: mpo:Mpop_1143 hypothetical protein gene gene3097 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3050 Amir_3051 Amir_3051 Amir_3051 3527537 3528394 + transcriptional regulator%2C LysR family PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: smt:Smal_0276 transcriptional regulator%2C LysR family gene gene3098 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3051 Amir_3052 Amir_3052 Amir_3052 3528391 3528696 - pseudogene gene3099 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3052 Amir_3053 Amir_3053 Amir_3053 3528748 3529029 + pseudogene gene3100 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3053 Amir_3054 Amir_3054 Amir_3054 3529055 3530221 - histidine kinase PFAM: histidine kinase dimerization and phosphoacceptor region%3B ATP-binding region ATPase domain protein~KEGG: scl:sce5432 putative two-component system sensor kinase gene gene3101 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3054 Amir_3055 Amir_3055 Amir_3055 3530167 3530736 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: mlo:mlr3851 TetR family transcriptional regulator gene gene3102 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3055 Amir_3056 Amir_3056 Amir_3056 3530770 3532854 - RNA polymerase%2C sigma-24 subunit%2C ECF subfamily KEGG: hypothetical protein~TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family~PFAM: sigma-70 region 2 domain protein gene gene3103 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3056 Amir_3057 Amir_3057 Amir_3057 3533317 3533655 - hypothetical protein KEGG: ses:SARI_03963 hypothetical protein gene gene3104 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3057 Amir_3058 Amir_3058 Amir_3058 3533662 3534024 - protein of unknown function DUF202 PFAM: protein of unknown function DUF202~KEGG: pmy:Pmen_1718 hypothetical protein gene gene3105 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3058 Amir_3059 Amir_3059 Amir_3059 3534131 3535384 - cytochrome P450 PFAM: cytochrome P450~KEGG: mlo:mll6125 cytochrome P450-family protein gene gene3106 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3059 Amir_3060 Amir_3060 Amir_3060 3535635 3536576 - regulatory protein ArsR SMART: regulatory protein ArsR~KEGG: ade:Adeh_4096 serine/threonine protein kinase gene gene3107 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3060 Amir_3061 Amir_3061 Amir_3061 3536831 3537214 + hypothetical protein gene gene3108 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3061 Amir_3062 Amir_3062 Amir_3062 3537339 3537992 - Heme oxygenase PFAM: Haem oxygenase-like~KEGG: rpa:RPA1539 heme oxygenase (decyclizing) gene gene3109 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3062 Amir_3063 Amir_3063 Amir_3063 3538184 3539098 + Alpha/beta hydrolase fold-3 domain protein PFAM: Alpha/beta hydrolase fold-3 domain protein~KEGG: bha:BH2806 carboxylesterase gene gene3110 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3063 Amir_3064 Amir_3064 Amir_3064 3539268 3539922 + pseudogene gene3111 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3064 Amir_3065 Amir_3065 Amir_3065 3540076 3540864 + lipolytic protein G-D-S-L family PFAM: lipolytic protein G-D-S-L family~KEGG: bcb:BCB4264_A2458 hypothetical protein gene gene3112 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3065 Amir_3066 Amir_3066 Amir_3066 3540979 3542622 + extracellular solute-binding protein family 5 PFAM: extracellular solute-binding protein family 5~KEGG: dde:Dde_1329 dipeptide ABC transporter%2C solute-binding protein gene gene3113 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3066 Amir_3067 Amir_3067 Amir_3067 3542616 3543728 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: dde:Dde_1328 dipeptide ABC transporter%2C permease protein gene gene3114 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3067 Amir_3068 Amir_3068 Amir_3068 3543725 3544555 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: dde:Dde_1327 dipeptide ABC transporter%2C permease protein gene gene3115 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3068 Amir_3069 Amir_3069 Amir_3069 3544552 3545361 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: dde:Dde_1326 ATPase gene gene3116 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3069 Amir_3070 Amir_3070 Amir_3070 3545358 3545996 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: dde:Dde_1325 ATPase gene gene3117 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3070 Amir_3071 Amir_3071 Amir_3071 3546155 3547993 + asparagine synthase (glutamine-hydrolyzing) KEGG: scl:sce4939 hypothetical protein~TIGRFAM: asparagine synthase (glutamine- hydrolyzing)~PFAM: asparagine synthase%3B glutamine amidotransferase class-II gene gene3118 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3071 Amir_3072 Amir_3072 Amir_3072 3548265 3548585 + hypothetical protein gene gene3119 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3072 Amir_3073 Amir_3073 Amir_3073 3548582 3550843 + hypothetical protein KEGG: mgm:Mmc1_2162 TPR repeat-containing protein gene gene3120 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3073 Amir_3074 Amir_3074 Amir_3074 3550985 3551314 - small multidrug resistance protein PFAM: small multidrug resistance protein~KEGG: acr:Acry_0986 small multidrug resistance protein gene gene3121 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3074 Amir_3075 Amir_3075 Amir_3075 3551551 3552864 - aminotransferase class-III PFAM: aminotransferase class-III~KEGG: rsq:Rsph17025_3685 hypothetical protein gene gene3122 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3075 Amir_3076 Amir_3076 Amir_3076 3552861 3554159 - Acetylornithine transaminase PFAM: aminotransferase class-III~KEGG: aba:Acid345_3989 4-aminobutyrate aminotransferase gene gene3123 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3076 Amir_3077 Amir_3077 Amir_3077 3554156 3555721 - aldehyde dehydrogenase PFAM: Aldehyde Dehydrogenase~KEGG: sfu:Sfum_2203 aldehyde dehydrogenase gene gene3124 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3077 Amir_3078 Amir_3078 Amir_3078 3556274 3558508 + 5-methyltetrahydropteroyltriglutamate/homocystei neS-methyltransferase KEGG: swi:Swit_4786 5- methyltetrahydropteroyltriglutamate--homocysteine methyltransferase~TIGRFAM:5-methyltetrahydropteroyltriglutamate/homocy steineS-methyltransferase~PFAM: Methionine synthase vitamin-B12 independent%3B Cobalamin-independent synthase MetE domain protein gene gene3125 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3078 Amir_3079 Amir_3079 Amir_3079 3558964 3560028 + O-methyltransferase family 2 PFAM: O-methyltransferase family 2~KEGG: mxa:MXAN_2296 O-methyltransferase family protein gene gene3126 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3079 Amir_3080 Amir_3080 Amir_3080 3560165 3561487 + beta-lactamase PFAM: beta-lactamase~KEGG: aba:Acid345_4043 beta-lactamase gene gene3127 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3080 Amir_3081 Amir_3081 Amir_3081 3561549 3562364 - hypothetical protein gene gene3128 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3081 Amir_3082 Amir_3082 Amir_3082 3562364 3563494 - hypothetical protein KEGG: mex:Mext_2409 hypothetical protein gene gene3129 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3082 Amir_3083 Amir_3083 Amir_3083 3563494 3563829 - hypothetical protein gene gene3130 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3083 Amir_3084 Amir_3084 Amir_3084 3563867 3564520 - conserved hypothetical protein PFAM: conserved hypothetical protein~KEGG: ade:Adeh_0726 hypothetical protein gene gene3131 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3084 Amir_3085 Amir_3085 Amir_3085 3565485 3565913 - pseudogene gene3132 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3085 Amir_3086 Amir_3086 Amir_3086 3565933 3566313 - putative transposase KEGG: mrd:Mrad2831_6137 putative transposase gene gene3133 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3086 Amir_3087 Amir_3087 Amir_3087 3566472 3566894 - Endoribonuclease L-PSP PFAM: Endoribonuclease L-PSP~KEGG: mms:mma_1646 hypothetical protein gene gene3134 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3087 Amir_3088 Amir_3088 Amir_3088 3567005 3567547 + transcriptional regulator%2C MarR family PFAM: regulatory protein MarR~SMART: regulatory protein MarR~KEGG: rso:RSc2325 transcription regulator protein gene gene3135 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3088 Amir_3089 Amir_3089 Amir_3089 3567656 3569236 + methyl-accepting chemotaxis sensory transducer PFAM: chemotaxis sensory transducer%3B histidine kinase HAMP region domain protein~SMART: chemotaxis sensory transducer%3B histidine kinase HAMP region domain protein~KEGG: aba:Acid345_1672 methyl-accepting chemotaxis sensory transducer gene gene3136 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3089 Amir_3090 Amir_3090 Amir_3090 3569331 3570182 - transcriptional regulator%2C LysR family PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: kpe:KPK_2589 transcriptional regulator%2C LysR family gene gene3137 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3090 Amir_3091 Amir_3091 Amir_3091 3570227 3571156 + protein of unknown function DUF6 transmembrane PFAM: protein of unknown function DUF6 transmembrane~KEGG: hypothetical protein gene gene3138 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3091 Amir_3092 Amir_3092 Amir_3092 3571222 3572085 + helix-turn-helix domain protein SMART: helix-turn-helix domain protein~KEGG: acr:Acry_0313 XRE family transcriptional regulator gene gene3139 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3092 Amir_3093 Amir_3093 Amir_3093 3572224 3573423 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: bmv:BMASAVP1_A0386 putative transporter gene gene3140 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3093 Amir_3094 Amir_3094 Amir_3094 3573425 3573631 - pseudogene gene3141 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3094 Amir_3095 Amir_3095 Amir_3095 3573679 3573954 - hypothetical protein gene gene3142 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3095 Amir_3096 Amir_3096 Amir_3096 3574068 3574433 + transcriptional regulator%2C ArsR family PFAM: regulatory protein ArsR~SMART: regulatory protein ArsR~KEGG: dal:Dalk_3679 transcriptional regulator%2C ArsR family gene gene3143 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3096 Amir_3097 Amir_3097 Amir_3097 3574437 3576449 + heavy metal translocating P-type ATPase TIGRFAM: heavy metal translocating P-type ATPase%3B ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC%3B cadmium-translocating P-type ATPase~PFAM: E1-E2 ATPase-associated domain protein%3B Haloacid dehalogenase domain protein hydrolase~KEGG: afe:Lferr_0209 heavy metal translocating P- type ATPase gene gene3144 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3097 Amir_3098 Amir_3098 Amir_3098 3576475 3577119 - HAD-superfamily hydrolase%2C subfamily IA%2C variant 3 TIGRFAM: HAD-superfamily hydrolase%2C subfamily IA%2C variant 3%3B HAD-superfamily hydrolase%2C subfamily IA%2C variant 1~PFAM: Haloacid dehalogenase domain protein hydrolase~KEGG: aba:Acid345_3929 HAD-superfamily hydrolase subfamily IA%2C variant 3 gene gene3145 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3098 Amir_3099 Amir_3099 Amir_3099 3577184 3578341 + ROK family protein PFAM: ROK family protein~KEGG: sme:SMa2303 ROK family transcriptional regulator gene gene3146 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3099 Amir_3100 Amir_3100 Amir_3100 3578325 3579053 - hypothetical protein gene gene3147 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3100 Amir_3101 Amir_3101 Amir_3101 3579050 3580798 - hypothetical protein KEGG: ade:Adeh_0992 putative Vgr-related protein gene gene3148 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3101 Amir_3102 Amir_3102 Amir_3102 3580955 3582430 - adenosylhomocysteinase KEGG: afw:Anae109_0161 S-adenosyl-L-homocysteine hydrolase~TIGRFAM: adenosylhomocysteinase~PFAM: S-adenosyl-L-homocysteine hydrolase%3B S- adenosyl-L-homocysteine hydrolase%2C NAD binding gene gene3149 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3102 Amir_3103 Amir_3103 Amir_3103 3582456 3583661 - S-adenosylmethionine synthetase KEGG: bha:BH3300 S-adenosylmethionine synthetase~TIGRFAM: S-adenosylmethionine synthetase~PFAM: S-adenosylmethionine synthetase gene gene3150 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3103 Amir_3104 Amir_3104 Amir_3104 3583893 3585032 + hypothetical protein KEGG: dal:Dalk_4624 hypothetical protein gene gene3151 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3104 Amir_3105 Amir_3105 Amir_3105 3585039 3585503 - hypothetical protein gene gene3152 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3105 Amir_3106 Amir_3106 Amir_3106 3585645 3587291 - Ricin B lectin PFAM: Ricin B lectin%3B glycoside hydrolase clan GH- D~SMART: Ricin B lectin~KEGG: cak:Caul_2129 alpha-galactosidase gene gene3153 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3106 Amir_3107 Amir_3107 Amir_3107 3587729 3590044 + protein of unknown function DUF1680 PFAM: protein of unknown function DUF1680%3B Ricin B lectin~KEGG: hypothetical protein gene gene3154 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3107 Amir_3108 Amir_3108 Amir_3108 3590424 3591530 + Ricin B lectin PFAM: Ricin B lectin%3B lipolytic protein G-D-S-L family~SMART: Ricin B lectin~KEGG: hypothetical protein gene gene3155 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3108 Amir_3109 Amir_3109 Amir_3109 3591766 3593100 + monooxygenase FAD-binding PFAM: monooxygenase FAD-binding%3B FAD dependent oxidoreductase~KEGG: eta:ETA_13590 flavoprotein monooxygenase gene gene3156 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3109 Amir_3110 Amir_3110 Amir_3110 3593097 3594698 + aminotransferase class I and II PFAM: aminotransferase class I and II%3B Cys/Met metabolism pyridoxal-phosphate-dependent protein~KEGG: mxa:MXAN_2571 aminotransferase%2C class II gene gene3157 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3110 Amir_3111 Amir_3111 Amir_3111 3594753 3595643 - transcriptional regulator%2C AsnC family PFAM: regulatory protein AsnC/Lrp family~SMART: regulatory protein AsnC/Lrp family~KEGG: bav:BAV1824 transcriptional regulator gene gene3158 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3111 Amir_3112 Amir_3112 Amir_3112 3595640 3596596 - hypothetical protein KEGG: similar to ODAG protein gene gene3159 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3112 Amir_3113 Amir_3113 Amir_3113 3596668 3598617 - plasmid-related protein KEGG: xcb:XC_2636 plasmid-related protein gene gene3160 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3113 Amir_3114 Amir_3114 Amir_3114 3598614 3599102 - conserved hypothetical protein KEGG: bps:BPSL0769 hypothetical protein gene gene3161 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3114 Amir_3115 Amir_3115 Amir_3115 3599099 3600310 - conserved hypothetical protein KEGG: xcb:XC_2635 hypothetical protein gene gene3162 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3115 Amir_3116 Amir_3116 Amir_3116 3600866 3602050 + hypothetical protein gene gene3163 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3116 Amir_3117 Amir_3117 Amir_3117 3602172 3602786 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: dol:Dole_0928 TetR family transcriptional regulator gene gene3164 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3117 Amir_3118 Amir_3118 Amir_3118 3602876 3603745 + NmrA family protein PFAM: NmrA family protein%3B dTDP-4-dehydrorhamnose reductase~KEGG: mlo:mlr0239 hypothetical protein gene gene3165 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3118 Amir_3119 Amir_3119 Amir_3119 3603742 3604641 + Luciferase-like monooxygenase PFAM: Luciferase-like monooxygenase~KEGG: swi:Swit_2098 luciferase family protein gene gene3166 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3119 Amir_3120 Amir_3120 Amir_3120 3604645 3605176 - pseudogene gene3167 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3120 Amir_3121 Amir_3121 Amir_3121 3605268 3606515 + protein serine/threonine phosphatase PFAM: Stage II sporulation E family protein~SMART: protein phosphatase 2C domain protein~KEGG: xau:Xaut_2796 cyclic nucleotide-binding protein gene gene3168 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3121 Amir_3122 Amir_3122 Amir_3122 3607014 3607250 + hypothetical protein gene gene3169 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3122 Amir_3123 Amir_3123 Amir_3123 3607447 3611625 + hypothetical protein KEGG: mxa:MXAN_5493 WD domain G-beta repeat protein gene gene3170 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3123 Amir_3124 Amir_3124 Amir_3124 3611656 3612777 - hypothetical protein KEGG: hne:HNE_0890 TRAP dicarboxylate transporter%2C DctM subunit gene gene3171 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3124 Amir_3125 Amir_3125 Amir_3125 3613022 3613303 - hypothetical protein KEGG: mxa:MXAN_6144 putative oxygen-dependent FAD- linked oxidoreductase gene gene3172 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3125 Amir_3126 Amir_3126 Amir_3126 3613444 3613887 - FAD linked oxidase domain protein PFAM: FAD linked oxidase domain protein~KEGG: mxa:MXAN_6144 putative oxygen-dependent FAD- linked oxidoreductase gene gene3173 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3126 Amir_3127 Amir_3127 Amir_3127 3614441 3614857 + pseudogene gene3174 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3127 Amir_3128 Amir_3128 Amir_3128 3614844 3615773 - transcriptional regulator%2C LysR family PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: scl:sce1114 LysR family transcriptional regulator gene gene3175 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3128 Amir_3129 Amir_3129 Amir_3129 3615819 3616556 + FAD-binding 9 siderophore-interacting domain protein PFAM: FAD-binding 9 siderophore-interacting domain protein~KEGG: scl:sce8821 hypothetical protein gene gene3176 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3129 Amir_3130 Amir_3130 Amir_3130 3616830 3617096 + hypothetical protein KEGG: dal:Dalk_3308 acyl carrier protein gene gene3177 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3130 Amir_3131 Amir_3131 Amir_3131 3617096 3618061 + Beta-ketoacyl-acyl-carrier-protein synthase I PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein%3B 3-Oxoacyl-[acyl-carrier- protein (ACP)] synthase III~KEGG: gdi:GDI3075 putative 3-oxoacyl-[acyl-carrier- protein] synthase 3 (3-oxoacyl [acyl-carrier-protein] synthase III) (beta-ketoacyl-ACP synthase III (KAS III) gene gene3178 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3131 Amir_3132 Amir_3132 Amir_3132 3618088 3619422 + cytochrome P450 PFAM: cytochrome P450~KEGG: mxa:MXAN_3943 cytochrome P450 family protein gene gene3179 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3132 Amir_3133 Amir_3133 Amir_3133 3619419 3620462 + 3-Oxoacyl-(acyl-carrier-protein (ACP)) synthase III domain protein PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein~KEGG: bpy:Bphyt_6246 3-oxoacyl-(acyl-carrier- protein (ACP)) synthase III domain protein gene gene3180 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3133 Amir_3134 Amir_3134 Amir_3134 3620477 3623104 + aminotransferase class-III PFAM: aminotransferase class-III%3B protein of unknown function RIO1%3B aminoglycoside phosphotransferase%3B ABC-1 domain protein~KEGG: sus:Acid_1674 aminotransferase gene gene3181 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3134 Amir_3135 Amir_3135 Amir_3135 3623108 3623974 + 6-phosphogluconate dehydrogenase NAD-binding PFAM: 6-phosphogluconate dehydrogenase NAD-binding~KEGG: bur:Bcep18194_C6793 beta-hydroxyacid dehydrogenase gene gene3182 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3135 Amir_3136 Amir_3136 Amir_3136 3623982 3624347 - hypothetical protein KEGG: mpo:Mpop_0225 hypothetical protein gene gene3183 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3136 Amir_3137 Amir_3137 Amir_3137 3624401 3625156 - Methyltransferase type 11 PFAM: Methyltransferase type 11%3B Methyltransferase type 12~KEGG: ret:RHE_PE00158 methyltransferase protein gene gene3184 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3137 Amir_3138 Amir_3138 Amir_3138 3625259 3625699 + hypothetical protein gene gene3185 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3138 Amir_3139 Amir_3139 Amir_3139 3625742 3626476 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B KR domain protein%3B Male sterility domain%3B NAD-dependent epimerase/dehydratase~KEGG: 3-oxoacyl-(acyl-carrier-protein) reductase protein%3B K00059 3-oxoacyl- gene gene3186 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3139 Amir_3140 Amir_3140 Amir_3140 3626621 3627313 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: bid:Bind_1892 TetR family transcriptional regulator gene gene3187 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3140 Amir_3141 Amir_3141 Amir_3141 3627477 3628262 + deoxyribose-phosphate aldolase/phospho-2-dehydro- 3-deoxyheptonate aldolase PFAM: deoxyribose-phosphate aldolase/phospho-2- dehydro-3-deoxyheptonate aldolase~KEGG: bur:Bcep18194_C6861 fructose-bisphosphate aldolase gene gene3188 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3141 Amir_3142 Amir_3142 Amir_3142 3628412 3629452 - Alcohol dehydrogenase GroES domain protein PFAM: Alcohol dehydrogenase GroES domain protein%3B Alcohol dehydrogenase zinc-binding domain protein~KEGG: reu:Reut_C6082 zinc-containing alcohol dehydrogenase superfamily protein gene gene3189 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3142 Amir_3143 Amir_3143 Amir_3143 3629449 3630141 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: scl:sce6308 TetR family transcriptional regulator gene gene3190 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3143 Amir_3144 Amir_3144 Amir_3144 3630422 3631927 + sulphate transporter PFAM: sulphate transporter%3B Sulfate transporter/antisigma-factor antagonist STAS%3B Xanthine/uracil/vitamin C permease~KEGG: esa:ESA_00979 hypothetical protein gene gene3191 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3144 Amir_3145 Amir_3145 Amir_3145 3632037 3632759 + B3/4 domain protein PFAM: B3/4 domain protein~KEGG: hypothetical protein gene gene3192 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3145 Amir_3146 Amir_3146 Amir_3146 3632947 3634179 + cytochrome P450 PFAM: cytochrome P450~KEGG: bxe:Bxe_C0945 putative cytochrome P450 gene gene3193 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3146 Amir_3147 Amir_3147 Amir_3147 3634208 3634759 - regulatory protein TetR PFAM: regulatory protein TetR~KEGG: bat:BAS4873 transcriptional regulator%2C putative gene gene3194 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3147 Amir_3148 Amir_3148 Amir_3148 3634832 3635521 - ThiJ/PfpI domain protein PFAM: ThiJ/PfpI domain protein~KEGG: pfo:Pfl01_1835 ThiJ/PfpI gene gene3195 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3148 Amir_3149 Amir_3149 Amir_3149 3635559 3636392 - Abortive infection protein PFAM: Abortive infection protein~KEGG: sdn:Sden_1909 abortive infection protein gene gene3196 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3149 Amir_3150 Amir_3150 Amir_3150 3636501 3637107 + pseudogene gene3197 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3150 Amir_3151 Amir_3151 Amir_3151 3637126 3638271 - Arsenical pump membrane protein PFAM: Arsenical pump membrane protein%3B Citrate transporter~KEGG: bvi:Bcep1808_6442 arsenical pump membrane protein gene gene3198 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3151 Amir_3152 Amir_3152 Amir_3152 3638268 3639443 - metallophosphoesterase PFAM: metallophosphoesterase~KEGG: rpi:Rpic_2954 metallophosphoesterase gene gene3199 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3152 Amir_3153 Amir_3153 Amir_3153 3639554 3640222 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: bid:Bind_0033 TetR family transcriptional regulator gene gene3200 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3153 Amir_3154 Amir_3154 Amir_3154 3640512 3641660 + Ricin B lectin PFAM: Ricin B lectin~SMART: Ricin B lectin~KEGG: sde:Sde_3022 hypothetical protein gene gene3201 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3154 Amir_3155 Amir_3155 Amir_3155 3641698 3642741 - hypothetical protein gene gene3202 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3155 Amir_3156 Amir_3156 Amir_3156 3642738 3643904 - hypothetical protein gene gene3203 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3156 Amir_3157 Amir_3157 Amir_3157 3644502 3647354 + ribonucleoside-diphosphate reductase%2C alpha subunit KEGG: mes:Meso_2703 ribonucleotide-diphosphate reductase subunit alpha~TIGRFAM: ribonucleoside-diphosphate reductase%2C alpha subunit~PFAM: ribonucleotide reductase large subunit%3B ATP- cone domain protein%3B Ribonucleotide reductase large subunit domain protein gene gene3204 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3157 Amir_3158 Amir_3158 Amir_3158 3647351 3648427 + Ribonucleoside-diphosphate reductase PFAM: ribonucleotide reductase~KEGG: oca:OCAR_6755 ribonucleoside-diphosphate reductase%2C beta subunit gene gene3205 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3158 Amir_3159 Amir_3159 Amir_3159 3648629 3649867 + Mn2+/Fe2+ transporter%2C NRAMP family TIGRFAM: Mn2+/Fe2+ transporter%2C NRAMP family~PFAM: natural resistance-associated macrophage protein~KEGG: bcb:BCB4264_A1874 transport protein%2C NRAMP family gene gene3206 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3159 Amir_3160 Amir_3160 Amir_3160 3649919 3651133 - protein of unknown function DUF955 PFAM: protein of unknown function DUF955%3B helix- turn-helix domain protein~SMART: helix-turn-helix domain protein~KEGG: ppd:Ppro_0104 helix-turn-helix domain- containing protein gene gene3207 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3160 Amir_3161 Amir_3161 Amir_3161 3651130 3651933 - hypothetical protein gene gene3208 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3161 Amir_3162 Amir_3162 Amir_3162 3652133 3654349 + MMPL domain protein PFAM: MMPL domain protein~KEGG: bsu:BSU05430 hypothetical protein gene gene3209 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3162 Amir_3163 Amir_3163 Amir_3163 3654551 3655276 + lipolytic protein G-D-S-L family PFAM: lipolytic protein G-D-S-L family~KEGG: scl:sce8862 BKRF1 encodes EBNA-1 protein%2C latent cycle gene gene gene3210 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3163 Amir_3164 Amir_3164 Amir_3164 3655388 3655732 + anti-sigma-factor antagonist TIGRFAM: anti-anti-sigma factor~PFAM: Sulfate transporter/antisigma-factor antagonist STAS~KEGG: mca:MCA1686 anti-sigma B factor antagonist gene gene3211 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3164 Amir_3165 Amir_3165 Amir_3165 3655954 3656958 + Enoyl-CoA hydratase/isomerase PFAM: Enoyl-CoA hydratase/isomerase~KEGG: acr:Acry_0624 enoyl-CoA hydratase/isomerase gene gene3212 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3165 Amir_3166 Amir_3166 Amir_3166 3657082 3657708 + hypothetical protein KEGG: pzu:PHZ_p0176 hypothetical protein gene gene3213 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3166 Amir_3167 Amir_3167 Amir_3167 3657795 3658148 + hypothetical protein gene gene3214 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3167 Amir_3168 Amir_3168 Amir_3168 3658171 3658398 - hypothetical protein gene gene3215 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3168 Amir_3169 Amir_3169 Amir_3169 3658614 3659090 + hypothetical protein KEGG: kpn:KPN_01215 ABC transporter membrane protein gene gene3216 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3169 Amir_3170 Amir_3170 Amir_3170 3659220 3659933 + hypothetical protein KEGG: hypothetical protein gene gene3217 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3170 Amir_3171 Amir_3171 Amir_3171 3660347 3661228 - Alcohol dehydrogenase zinc-binding domain protein PFAM: Alcohol dehydrogenase zinc-binding domain protein%3B Alcohol dehydrogenase GroES domain protein~KEGG: msl:Msil_0872 alcohol dehydrogenase GroES domain protein gene gene3218 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3171 Amir_3172 Amir_3172 Amir_3172 3661299 3661895 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: mrd:Mrad2831_4515 TetR family transcriptional regulator gene gene3219 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3172 Amir_3173 Amir_3173 Amir_3173 3662147 3662413 + conserved hypothetical protein KEGG: mca:MCA1086 hypothetical protein gene gene3220 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3173 Amir_3174 Amir_3174 Amir_3174 3662457 3664709 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: neu:NE0720 ABC transporter permease/ATP- binding protein gene gene3221 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3174 Amir_3175 Amir_3175 Amir_3175 3664718 3665968 + sodium/hydrogen exchanger PFAM: sodium/hydrogen exchanger~KEGG: mxa:MXAN_0260 putative cation transporter/universal stress family protein gene gene3222 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3175 Amir_3176 Amir_3176 Amir_3176 3666067 3666642 - hypothetical protein KEGG: cak:Caul_0156 ricin B lectin gene gene3223 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3176 Amir_3177 Amir_3177 Amir_3177 3666886 3667932 - O-methyltransferase family 2 PFAM: O-methyltransferase family 2~KEGG: mno:Mnod_7639 O-methyltransferase family 2 gene gene3224 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3177 Amir_3178 Amir_3178 Amir_3178 3668122 3671346 + transcriptional regulator%2C LuxR family PFAM: regulatory protein LuxR%3B Tetratricopeptide TPR_4%3B Bacterio-opsin activator HTH domain protein~SMART: regulatory protein LuxR~KEGG: GK24882 gene product from transcript GK24882- RA gene gene3225 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3178 Amir_3179 Amir_3179 Amir_3179 3671497 3676278 + Acyl transferase PFAM: Acyl transferase%3B short-chain dehydrogenase/reductase SDR%3B Beta-ketoacyl synthase%3B KR domain protein%3B Erythronolide synthase docking%3B phosphopantetheine-binding%3B NAD-dependent epimerase/dehydratase~KEGG: mxa:MXAN_4527 polyketide synthase gene gene3226 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3179 Amir_3180 Amir_3180 Amir_3180 3676288 3686355 + Acyl transferase PFAM: Acyl transferase%3B short-chain dehydrogenase/reductase SDR%3B Beta-ketoacyl synthase%3B KR domain protein%3B Erythronolide synthase docking%3B NAD- dependent epimerase/dehydratase%3B phosphopantetheine- binding~KEGG: met:M446_0170 beta-ketoacyl synthase gene gene3227 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3180 Amir_3181 Amir_3181 Amir_3181 3686357 3687136 + N-acetyltransferase PFAM: N-acetyltransferase~KEGG: mxa:MXAN_1194 N-acetyltransferase family protein gene gene3228 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3181 Amir_3182 Amir_3182 Amir_3182 3687233 3688174 - methyltransferase TIGRFAM: methyltransferase~PFAM: O-methyltransferase domain protein~KEGG: bur:Bcep18194_B1573 protein of unknown function Mtu_121 gene gene3229 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3182 Amir_3183 Amir_3183 Amir_3183 3688171 3689706 - monooxygenase FAD-binding PFAM: monooxygenase FAD-binding~KEGG: gbe:GbCGDNIH1_1787 hypothetical protein gene gene3230 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3183 Amir_3184 Amir_3184 Amir_3184 3689718 3691043 - tryptophan halogenase PFAM: tryptophan halogenase%3B monooxygenase FAD- binding%3B FAD dependent oxidoreductase~KEGG: scl:sce7303 putative dehyrogenase gene gene3231 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3184 Amir_3185 Amir_3185 Amir_3185 3691300 3692295 + 3-hydroxyacyl-CoA dehydrogenase NAD-binding PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding%3B 3-hydroxyacyl-CoA dehydrogenase domain protein~KEGG: bid:Bind_3102 3-hydroxybutyryl-CoA dehydrogenase gene gene3232 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3185 Amir_3186 Amir_3186 Amir_3186 3692292 3692564 + hypothetical protein KEGG: gbm:Gbem_0719 hypothetical protein gene gene3233 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3186 Amir_3187 Amir_3187 Amir_3187 3692557 3693672 + acyl-CoA dehydrogenase domain protein PFAM: acyl-CoA dehydrogenase domain protein%3B Acyl- CoA dehydrogenase type 2 domain~KEGG: hch:HCH_03452 acyl-CoA dehydrogenase gene gene3234 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3187 Amir_3188 Amir_3188 Amir_3188 3693786 3695078 + FkbH like protein TIGRFAM: FkbH like protein%3B HAD-superfamily phosphatase%2C subfamily IIIC~KEGG: nmu:Nmul_A2515 FkbH domain-containing protein gene gene3235 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3188 Amir_3189 Amir_3189 Amir_3189 3695071 3695733 + Caffeoyl-CoA O-methyltransferase PFAM: O-methyltransferase family 3~KEGG: rce:RC1_1081 O-methyltransferase%2C putative gene gene3236 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3189 Amir_3190 Amir_3190 Amir_3190 3695911 3698670 + transcriptional regulator%2C putative ATPase%2C winged helix family PFAM: transcriptional activator domain%3B transcriptional regulator domain protein~KEGG: sme:SMa0464 adenylate/guanylate cyclase gene gene3237 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3190 Amir_3191 Amir_3191 Amir_3191 3698696 3699832 + acyltransferase 3 PFAM: acyltransferase 3~KEGG: acp:A2cp1_3016 acyltransferase 3 gene gene3238 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3191 Amir_3192 Amir_3192 Amir_3192 3699847 3700194 - YCII-related protein PFAM: YCII-related~KEGG: bja:bll6613 hypothetical protein gene gene3239 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3192 Amir_3193 Amir_3193 Amir_3193 3700424 3702436 + Carbamoyltransferase PFAM: Carbamoyltransferase~KEGG: mlo:mlr6171 nodulation protein NolO gene gene3240 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3193 Amir_3194 Amir_3194 Amir_3194 3702839 3703204 + hypothetical protein gene gene3241 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3194 Amir_3195 Amir_3195 Amir_3195 3703523 3703957 - 3-dehydroquinate dehydratase PFAM: dehydroquinase class II~KEGG: bha:BH2801 3-dehydroquinate dehydratase gene gene3242 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3195 Amir_3196 Amir_3196 Amir_3196 3704178 3705344 + Glutamine--scyllo-inositol transaminase PFAM: DegT/DnrJ/EryC1/StrS aminotransferase%3B aromatic amino acid beta-eliminating lyase/threonine aldolase%3B Cys/Met metabolism pyridoxal-phosphate-dependent protein~KEGG: rpb:RPB_2068 DegT/DnrJ/EryC1/StrS aminotransferase gene gene3243 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3196 Amir_3197 Amir_3197 Amir_3197 3705533 3719260 + Acyl transferase PFAM: Acyl transferase%3B AMP-dependent synthetase and ligase%3B Beta-ketoacyl synthase%3B Alcohol dehydrogenase GroES domain protein%3B short-chain dehydrogenase/reductase SDR%3B KR domain protein%3B Alcohol dehydrogenase zinc-binding domain protein%3B phosphopantetheine-binding~KEGG: met:M446_0172 beta-ketoacyl synthase gene gene3244 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3197 Amir_3198 Amir_3198 Amir_3198 3719257 3728703 + Acyl transferase PFAM: Acyl transferase%3B short-chain dehydrogenase/reductase SDR%3B Beta-ketoacyl synthase%3B KR domain protein%3B phosphopantetheine-binding~KEGG: mxa:MXAN_4527 polyketide synthase gene gene3245 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3198 Amir_3199 Amir_3199 Amir_3199 3728780 3729988 + UDP-glucuronosyl/UDP-glucosyltransferase PFAM: UDP-glucuronosyl/UDP-glucosyltransferase~KEGG: cak:Caul_2842 glycosyl transferase family protein gene gene3246 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3199 Amir_3200 Amir_3200 Amir_3200 3730371 3731396 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B KR domain protein~KEGG: ank:AnaeK_2751 short-chain dehydrogenase/reductase SDR gene gene3247 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3200 Amir_3201 Amir_3201 Amir_3201 3731475 3731939 - TonB-dependent siderophore receptor KEGG: sde:Sde_2765 TonB-dependent siderophore receptor gene gene3248 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3201 Amir_3202 Amir_3202 Amir_3202 3732121 3732702 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: bur:Bcep18194_C6787 TetR family transcriptional regulator gene gene3249 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3202 Amir_3203 Amir_3203 Amir_3203 3732767 3734795 + pseudogene gene3250 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3203 Amir_3204 Amir_3204 Amir_3204 3734701 3735750 - RNA polymerase%2C sigma 70 subunit%2C RpoD subfamily TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family~PFAM: sigma-70 region 3 domain protein%3B sigma-70 region 2 domain protein%3B sigma-70 region 1.2%3B sigma-70 region 4 domain protein~KEGG: bha:BH1376 RNA polymerase sigma factor RpoD gene gene3251 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3204 Amir_3205 Amir_3205 Amir_3205 3735915 3736547 - Methyltransferase type 11 PFAM: Methyltransferase type 11%3B Methyltransferase type 12~KEGG: sil:SPO3211 hypothetical protein gene gene3252 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3205 Amir_3206 Amir_3206 Amir_3206 3736662 3737431 + pseudogene gene3253 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3206 Amir_3207 Amir_3207 Amir_3207 3737416 3737991 - bifunctional deaminase-reductase domain protein PFAM: bifunctional deaminase-reductase domain protein~KEGG: mxa:MXAN_1250 RibD domain protein gene gene3254 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3207 Amir_3208 Amir_3208 Amir_3208 3738078 3738692 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: psa:PST_0620 hypothetical protein gene gene3255 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3208 Amir_3209 Amir_3209 Amir_3209 3738944 3740629 - hypothetical protein KEGG: scl:sce8854 putative secreted protein gene gene3256 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3209 Amir_3210 Amir_3210 Amir_3210 3741293 3741385 + pseudogene gene3257 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3210 Amir_3211 Amir_3211 Amir_3211 3741439 3742545 - conserved hypothetical protein KEGG: rce:RC1_3059 hypothetical protein gene gene3258 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3211 Amir_3212 Amir_3212 Amir_3212 3742622 3743374 - intradiol ring-cleavage dioxygenase PFAM: intradiol ring-cleavage dioxygenase~KEGG: noc:Noc_1128 protocatechuate 3 4-dioxygenase beta subunit like protein gene gene3259 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3212 Amir_3213 Amir_3213 Amir_3213 3743552 3744946 - glycoside hydrolase family 43 PFAM: glycoside hydrolase family 43%3B Carbohydrate binding family 6~SMART: cellulose binding type IV~KEGG: hypothetical protein gene gene3260 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3213 Amir_3214 Amir_3214 Amir_3214 3744954 3746327 - Endo-1%2C4-beta-xylanase KEGG: XylD%3B endoxylanase D~PFAM: glycoside hydrolase family 10%3B cellulose- binding family II~SMART: glycoside hydrolase family 10%3B cellulose- binding family II gene gene3261 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3214 Amir_3215 Amir_3215 Amir_3215 3746657 3747973 + glycoside hydrolase family 6 PFAM: glycoside hydrolase family 6%3B cellulose- binding family II~SMART: cellulose-binding family II~KEGG: mxa:MXAN_4837 endoglucanase gene gene3262 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3215 Amir_3216 Amir_3216 Amir_3216 3748226 3750175 + glycoside hydrolase family 5 PFAM: glycoside hydrolase family 5%3B Fibronectin type III domain protein%3B cellulose-binding family II~SMART: cellulose-binding family II%3B Fibronectin type III domain protein~KEGG: azc:AZC_1301 endoglucanase gene gene3263 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3216 Amir_3217 Amir_3217 Amir_3217 3750230 3750451 - proteinase inhibitor I13 potato inhibitor I PFAM: proteinase inhibitor I13 potato inhibitor I~KEGG: similar to chymotrypsin inhibitor 2 gene gene3264 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3217 Amir_3218 Amir_3218 Amir_3218 3750581 3751756 + histidine kinase PFAM: histidine kinase dimerization and phosphoacceptor region%3B ATP-binding region ATPase domain protein~KEGG: scl:sce5432 putative two-component system sensor kinase gene gene3265 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3218 Amir_3219 Amir_3219 Amir_3219 3751753 3752379 + two component transcriptional regulator%2C LuxR family PFAM: response regulator receiver%3B regulatory protein LuxR%3B Bacterio-opsin activator HTH domain protein~SMART: response regulator receiver%3B regulatory protein LuxR~KEGG: scl:sce5431 two-component system response regulator gene gene3266 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3219 Amir_3220 Amir_3220 Amir_3220 3752670 3753290 + hypothetical protein KEGG: pap:PSPA7_2550 hypothetical protein gene gene3267 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3220 Amir_3221 Amir_3221 Amir_3221 3753287 3754132 + hypothetical protein KEGG: rde:RD1_3606 hypothetical protein gene gene3268 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3221 Amir_3222 Amir_3222 Amir_3222 3754123 3756144 + cellulose-binding family II PFAM: cellulose-binding family II%3B Spore coat protein CotH~SMART: cellulose-binding family II~KEGG: scl:sce0771 hypothetical protein gene gene3269 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3222 Amir_3223 Amir_3223 Amir_3223 3756492 3757043 + VanZ family protein PFAM: VanZ family protein gene gene3270 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3223 Amir_3224 Amir_3224 Amir_3224 3757040 3758176 + hypothetical protein KEGG: hne:HNE_2077 hypothetical protein gene gene3271 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3224 Amir_3225 Amir_3225 Amir_3225 3758191 3758913 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B KR domain protein~KEGG: bpy:Bphyt_6660 short-chain dehydrogenase/reductase SDR gene gene3272 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3225 Amir_3226 Amir_3226 Amir_3226 3758910 3759947 - aldo/keto reductase PFAM: aldo/keto reductase~KEGG: spe:Spro_1178 aldo/keto reductase gene gene3273 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3226 Amir_3227 Amir_3227 Amir_3227 3760068 3760901 + helix-turn-helix domain protein SMART: helix-turn-helix domain protein~KEGG: sml:Smlt2229 hypothetical protein gene gene3274 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3227 Amir_3228 Amir_3228 Amir_3228 3760957 3763521 - Osmosensitive K channel His kinase sensor PFAM: Osmosensitive K channel His kinase sensor%3B ATP-binding region ATPase domain protein%3B UspA domain protein%3B histidine kinase A domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein~KEGG: mno:Mnod_0197 osmosensitive K+ channel signal transduction histidine kinase gene gene3275 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3228 Amir_3229 Amir_3229 Amir_3229 3763595 3764146 - Potassium-transporting ATPase PFAM: K transporting ATPase KdpC subunit~KEGG: xop:PXO_04385 K+-transporting ATPase%2C C subunit gene gene3276 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3229 Amir_3230 Amir_3230 Amir_3230 3764143 3766185 - K+-transporting ATPase%2C B subunit TIGRFAM: K+-transporting ATPase%2C B subunit%3B ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC~PFAM: E1-E2 ATPase-associated domain protein%3B Haloacid dehalogenase domain protein hydrolase~KEGG: sus:Acid_0074 K+-transporting ATPase%2C B subunit gene gene3277 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3230 Amir_3231 Amir_3231 Amir_3231 3766182 3767804 - potassium-transporting ATPase%2C A subunit KEGG: smd:Smed_5358 potassium-transporting ATPase subunit A~TIGRFAM: potassium-transporting ATPase%2C A subunit~PFAM: K transporting ATPase A subunit gene gene3278 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3231 Amir_3232 Amir_3232 Amir_3232 3767804 3767905 - K+-transporting ATPase%2C F subunit TIGRFAM: K+-transporting ATPase%2C F subunit gene gene3279 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3232 Amir_3233 Amir_3233 Amir_3233 3768790 3770775 - putative amino acid transporter KEGG: sus:Acid_1791 putative amino acid transporter gene gene3280 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3233 Amir_3234 Amir_3234 Amir_3234 3771068 3772381 + diaminopimelate decarboxylase TIGRFAM: diaminopimelate decarboxylase~PFAM: Orn/DAP/Arg decarboxylase 2~KEGG: bcy:Bcer98_1141 diaminopimelate decarboxylase gene gene3281 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3234 Amir_3235 Amir_3235 Amir_3235 3772476 3772973 + pseudogene gene3282 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3235 Amir_3236 Amir_3236 Amir_3236 3772998 3773411 - putative anti-sigma regulatory factor%2C serine/threonine protein kinase PFAM: ATP-binding region ATPase domain protein~KEGG: ade:Adeh_0021 periplasmic sensor signal transduction histidine kinase gene gene3283 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3236 Amir_3237 Amir_3237 Amir_3237 3773780 3774166 - anti-sigma-factor antagonist TIGRFAM: anti-anti-sigma factor~PFAM: Sulfate transporter/antisigma-factor antagonist STAS~KEGG: sfu:Sfum_4033 anti-sigma-factor antagonist gene gene3284 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3237 Amir_3238 Amir_3238 Amir_3238 3774353 3774949 + hypothetical protein KEGG: jan:Jann_4076 putative secreted protein gene gene3285 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3238 Amir_3239 Amir_3239 Amir_3239 3774980 3775990 - protein of unknown function DUF218 PFAM: protein of unknown function DUF218~KEGG: bat:BAS4694 hypothetical protein gene gene3286 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3239 Amir_3240 Amir_3240 Amir_3240 3776444 3778192 + Recombinase PFAM: Recombinase~KEGG: bca:BCE_4599 DNA recombinase%2C putative gene gene3287 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3240 Amir_3241 Amir_3241 Amir_3241 3778260 3778451 - hypothetical protein gene gene3288 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3241 Amir_3242 Amir_3242 Amir_3242 3778481 3779083 - hypothetical protein gene gene3289 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3242 Amir_3243 Amir_3243 Amir_3243 3779245 3779502 - hypothetical protein gene gene3290 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3243 Amir_3244 Amir_3244 Amir_3244 3779653 3780615 - glycoside hydrolase family 25 PFAM: glycoside hydrolase family 25%3B Peptidoglycan- binding LysM~SMART: Peptidoglycan-binding LysM%3B glycoside hydrolase family 25~KEGG: mxa:MXAN_7387 chitinase%2C class I gene gene3291 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3244 Amir_3245 Amir_3245 Amir_3245 3780695 3781039 - hypothetical protein KEGG: ade:Adeh_2705 response regulator receiver gene gene3292 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3245 Amir_3246 Amir_3246 Amir_3246 3781466 3783685 - hypothetical protein KEGG: rso:RS05070 putative hemagglutinin/hemolysin- related protein gene gene3293 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3246 Amir_3247 Amir_3247 Amir_3247 3783672 3784466 - hypothetical protein gene gene3294 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3247 Amir_3248 Amir_3248 Amir_3248 3784471 3785427 - hypothetical protein KEGG: bce:BC1906 phage protein gene gene3295 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3248 Amir_3249 Amir_3249 Amir_3249 3785424 3787232 - hypothetical protein KEGG: rsp:RSP_3854 ICE nucleation protein gene gene3296 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3249 Amir_3250 Amir_3250 Amir_3250 3787377 3787706 - hypothetical protein gene gene3297 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3250 Amir_3251 Amir_3251 Amir_3251 3787760 3787987 - hypothetical protein gene gene3298 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3251 Amir_3252 Amir_3252 Amir_3252 3788053 3788676 - hypothetical protein gene gene3299 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3252 Amir_3253 Amir_3253 Amir_3253 3788667 3789116 - hypothetical protein gene gene3300 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3253 Amir_3254 Amir_3254 Amir_3254 3789113 3789433 - hypothetical protein gene gene3301 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3254 Amir_3255 Amir_3255 Amir_3255 3789438 3789743 - hypothetical protein gene gene3302 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3255 Amir_3256 Amir_3256 Amir_3256 3789899 3790264 - hypothetical protein gene gene3303 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3256 Amir_3257 Amir_3257 Amir_3257 3790261 3790446 - hypothetical protein gene gene3304 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3257 Amir_3258 Amir_3258 Amir_3258 3790603 3790800 + hypothetical protein gene gene3305 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3258 Amir_3259 Amir_3259 Amir_3259 3790809 3791798 - hypothetical protein KEGG: bbt:BBta_5785 putative phage major head protein gene gene3306 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3259 Amir_3260 Amir_3260 Amir_3260 3791912 3792271 - hypothetical protein gene gene3307 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3260 Amir_3261 Amir_3261 Amir_3261 3792880 3793845 - hypothetical protein KEGG: hypothetical protein gene gene3308 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3261 Amir_3262 Amir_3262 Amir_3262 3793851 3795320 - protein of unknown function DUF1483 PFAM: protein of unknown function DUF1483 gene gene3309 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3262 Amir_3263 Amir_3263 Amir_3263 3795474 3796301 + hypothetical protein gene gene3310 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3263 Amir_3264 Amir_3264 Amir_3264 3796303 3797943 - Terminase PFAM: Terminase~KEGG: bca:BCE_0397 phage terminase%2C large subunit%2C putative gene gene3311 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3264 Amir_3265 Amir_3265 Amir_3265 3798032 3798493 - phage terminase%2C small subunit%2C P27 family TIGRFAM: phage terminase%2C small subunit%2C P27 family~PFAM: terminase small subunit putative P27~KEGG: rsh:Rsph17029_0646 P27 family phage terminase small subunit gene gene3312 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3265 Amir_3266 Amir_3266 Amir_3266 3798620 3799033 - hypothetical protein gene gene3313 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3266 Amir_3267 Amir_3267 Amir_3267 3799017 3799598 - hypothetical protein gene gene3314 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3267 Amir_3268 Amir_3268 Amir_3268 3799790 3800062 - hypothetical protein gene gene3315 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3268 Amir_3269 Amir_3269 Amir_3269 3800131 3800538 - pseudogene gene3316 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3269 Amir_3270 Amir_3270 Amir_3270 3800611 3801681 - hypothetical protein gene gene3317 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3270 Amir_3271 Amir_3271 Amir_3271 3801877 3802719 - transposase IS4 family protein PFAM: transposase IS4 family protein~KEGG: similar to F57G4.9 gene gene3318 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3271 Amir_3272 Amir_3272 Amir_3272 3802797 3803426 + hypothetical protein gene gene3319 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3272 Amir_3273 Amir_3273 Amir_3273 3803436 3804275 + aminoglycoside phosphotransferase PFAM: aminoglycoside phosphotransferase gene gene3320 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3273 Amir_3274 Amir_3274 Amir_3274 3804502 3805287 - Methyltransferase type 11 PFAM: Methyltransferase type 11%3B Cyclopropane-fatty- acyl-phospholipid synthase%3B UbiE/COQ5 methyltransferase%3B Methyltransferase type 12~KEGG: hypothetical protein gene gene3321 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3274 Amir_3275 Amir_3275 Amir_3275 3805284 3806099 - Methyltransferase type 11 PFAM: Methyltransferase type 11%3B UbiE/COQ5 methyltransferase%3B Cyclopropane-fatty-acyl-phospholipid synthase%3B Methyltransferase type 12~KEGG: hypothetical protein gene gene3322 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3275 Amir_3276 Amir_3276 Amir_3276 3806164 3807387 - cytochrome P450 PFAM: cytochrome P450~KEGG: bxe:Bxe_C0945 putative cytochrome P450 gene gene3323 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3276 Amir_3277 Amir_3277 Amir_3277 3807416 3808633 - cytochrome P450 PFAM: cytochrome P450~KEGG: bxe:Bxe_C0945 putative cytochrome P450 gene gene3324 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3277 Amir_3278 Amir_3278 Amir_3278 3808681 3809337 - Caffeoyl-CoA O-methyltransferase PFAM: O-methyltransferase family 3~KEGG: rce:RC1_1081 O-methyltransferase%2C putative gene gene3325 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3278 Amir_3279 Amir_3279 Amir_3279 3809590 3810456 + 3-hydroxyacyl-CoA dehydrogenase NAD-binding PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding%3B 3-hydroxyacyl-CoA dehydrogenase domain protein~KEGG: aba:Acid345_4328 3-hydroxyacyl-CoA dehydrogenase gene gene3326 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3279 Amir_3280 Amir_3280 Amir_3280 3810453 3810728 + hypothetical protein KEGG: gbm:Gbem_0719 hypothetical protein gene gene3327 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3280 Amir_3281 Amir_3281 Amir_3281 3810725 3811912 + acyl-CoA dehydrogenase domain protein PFAM: acyl-CoA dehydrogenase domain protein%3B Acyl- CoA dehydrogenase type 2 domain~KEGG: hch:HCH_03452 acyl-CoA dehydrogenase gene gene3328 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3281 Amir_3282 Amir_3282 Amir_3282 3811909 3813000 + FkbH like protein TIGRFAM: FkbH like protein%3B HAD-superfamily phosphatase%2C subfamily IIIC~KEGG: nmu:Nmul_A2515 FkbH domain-containing protein gene gene3329 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3282 Amir_3283 Amir_3283 Amir_3283 3813054 3815063 + Carbamoyltransferase PFAM: Carbamoyltransferase~KEGG: mlo:mlr6171 nodulation protein NolO gene gene3330 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3283 Amir_3284 Amir_3284 Amir_3284 3815095 3815421 + O-linked N-acetylglucosamine transferase KEGG: mag:amb2610 O-linked N-acetylglucosamine transferase gene gene3331 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3284 Amir_3285 Amir_3285 Amir_3285 3815614 3816543 + ROK family protein PFAM: ROK family protein~KEGG: met:M446_2296 ROK family protein gene gene3332 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3285 Amir_3286 Amir_3286 Amir_3286 3816501 3816998 - 3-dehydroquinate dehydratase PFAM: dehydroquinase class II~KEGG: aeh:Mlg_0024 3-dehydroquinate dehydratase gene gene3333 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3286 Amir_3287 Amir_3287 Amir_3287 3817176 3818342 + Glutamine--scyllo-inositol transaminase PFAM: DegT/DnrJ/EryC1/StrS aminotransferase~KEGG: rpb:RPB_2068 DegT/DnrJ/EryC1/StrS aminotransferase gene gene3334 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3287 Amir_3288 Amir_3288 Amir_3288 3818416 3819540 + oxidoreductase domain protein PFAM: oxidoreductase domain protein%3B Semialdehyde dehydrogenase NAD - binding~KEGG: rpb:RPB_2066 oxidoreductase-like gene gene3335 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3288 Amir_3289 Amir_3289 Amir_3289 3819540 3820334 + AHBA synthesis associated protein TIGRFAM: AHBA synthesis associated protein%3B HAD- superfamily hydrolase%2C subfamily IA%2C variant 3%3B HAD- superfamily hydrolase%2C subfamily IA%2C variant 1~PFAM: Haloacid dehalogenase domain protein hydrolase~KEGG: rpb:RPB_2065 HAD-superfamily hydrolase gene gene3336 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3289 Amir_3290 Amir_3290 Amir_3290 3820381 3821952 - monooxygenase FAD-binding PFAM: monooxygenase FAD-binding~KEGG: bcj:BCAL1339 aromatic hydrocarbon catabolic monooxygenase gene gene3337 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3290 Amir_3291 Amir_3291 Amir_3291 3821957 3822733 - N-acetyltransferase PFAM: N-acetyltransferase~KEGG: si:rp71-1f1.6 gene gene3338 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3291 Amir_3292 Amir_3292 Amir_3292 3822742 3834366 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B KR domain protein%3B Beta-ketoacyl synthase%3B Acyl transferase%3B Alcohol dehydrogenase GroES domain protein%3B Alcohol dehydrogenase zinc-binding domain protein%3B phosphopantetheine-binding~KEGG: met:M446_0172 beta-ketoacyl synthase gene gene3339 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3292 Amir_3293 Amir_3293 Amir_3293 3834374 3844600 - Acyl transferase PFAM: Acyl transferase%3B short-chain dehydrogenase/reductase SDR%3B Beta-ketoacyl synthase%3B KR domain protein%3B Erythronolide synthase docking%3B phosphopantetheine-binding%3B NAD-dependent epimerase/dehydratase~KEGG: mxa:MXAN_4527 polyketide synthase gene gene3340 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3293 Amir_3294 Amir_3294 Amir_3294 3844681 3864987 - Acyl transferase PFAM: Acyl transferase%3B AMP-dependent synthetase and ligase%3B Beta-ketoacyl synthase%3B Alcohol dehydrogenase GroES domain protein%3B short-chain dehydrogenase/reductase SDR%3B KR domain protein%3B Alcohol dehydrogenase zinc-binding domain protein%3B NAD-dependent epimerase/dehydratase%3B phosphopantetheine-binding~KEGG: pst:PSPTO_4686 coronafacic acid polyketide synthase I gene gene3341 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3294 Amir_3295 Amir_3295 Amir_3295 3865365 3866054 + hypothetical protein gene gene3342 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3295 Amir_3296 Amir_3296 Amir_3296 3866242 3867291 + 3-dehydroquinate synthase PFAM: 3-dehydroquinate synthase~KEGG: gsu:GSU2025 3-dehydroquinate synthase gene gene3343 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3296 Amir_3297 Amir_3297 Amir_3297 3867406 3870132 - transcriptional regulator%2C LuxR family PFAM: regulatory protein LuxR%3B Tetratricopeptide TPR_4~SMART: regulatory protein LuxR~KEGG: vei:Veis_2932 regulatory protein%2C LuxR gene gene3344 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3297 Amir_3298 Amir_3298 Amir_3298 3871496 3871909 + GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: GNAT family acetyltransferase%2C putative gene gene3345 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3298 Amir_3299 Amir_3299 Amir_3299 3871967 3872809 - helix-turn-helix domain protein SMART: helix-turn-helix domain protein~KEGG: acr:Acry_0313 XRE family transcriptional regulator gene gene3346 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3299 Amir_3300 Amir_3300 Amir_3300 3872966 3873964 + superoxide dismutase KEGG: aav:Aave_4523 superoxide dismutase gene gene3347 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3300 Amir_3301 Amir_3301 Amir_3301 3874243 3875700 + glycoside hydrolase family 62 PFAM: glycoside hydrolase family 62%3B cellulose- binding family II~SMART: cellulose-binding family II~KEGG: glycosyl hydrolase family 62 protein gene gene3348 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3301 Amir_3302 Amir_3302 Amir_3302 3875783 3877381 + glycoside hydrolase family 43 PFAM: glycoside hydrolase family 43~KEGG: xylosidase/glycosyl hydrolase%2C putative gene gene3349 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3302 Amir_3303 Amir_3303 Amir_3303 3877420 3878730 + glycoside hydrolase family 62 PFAM: glycoside hydrolase family 62%3B cellulose- binding family II~SMART: cellulose-binding family II~KEGG: hypothetical protein gene gene3350 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3303 Amir_3304 Amir_3304 Amir_3304 3878775 3879851 + transcriptional regulator%2C LacI family PFAM: periplasmic binding protein/LacI transcriptional regulator%3B regulatory protein LacI~SMART: regulatory protein LacI~KEGG: bur:Bcep18194_B2373 LacI family transcription regulator gene gene3351 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3304 Amir_3305 Amir_3305 Amir_3305 3879900 3881114 - hypothetical protein KEGG: mxa:MXAN_1686 acetyltransferase%2C GNAT family gene gene3352 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3305 Amir_3306 Amir_3306 Amir_3306 3881218 3881787 + regulatory protein TetR PFAM: regulatory protein TetR~KEGG: bcy:Bcer98_3256 TetR family transcriptional regulator gene gene3353 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3306 Amir_3307 Amir_3307 Amir_3307 3881859 3882383 + isochorismatase hydrolase PFAM: isochorismatase hydrolase~KEGG: bxe:Bxe_C0259 isochorismatase hydrolase family protein gene gene3354 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3307 Amir_3308 Amir_3308 Amir_3308 3882421 3885438 - transcriptional regulator%2C winged helix family PFAM: transcriptional activator domain%3B transcriptional regulator domain protein~KEGG: scl:sce5225 protein kinase gene gene3355 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3308 Amir_3309 Amir_3309 Amir_3309 3885560 3886279 + conserved hypothetical protein KEGG: scl:sce8587 hypothetical protein gene gene3356 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3309 Amir_3310 Amir_3310 Amir_3310 3886345 3887115 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: bid:Bind_1892 TetR family transcriptional regulator gene gene3357 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3310 Amir_3311 Amir_3311 Amir_3311 3887208 3888134 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B KR domain protein%3B NAD-dependent epimerase/dehydratase~KEGG: short-chain oxidoreductase protein gene gene3358 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3311 Amir_3312 Amir_3312 Amir_3312 3888175 3888381 + 4-oxalocrotonate tautomerase PFAM: 4-oxalocrotonate tautomerase~KEGG: bcm:Bcenmc03_4438 4-oxalocrotonate tautomerase gene gene3359 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3312 Amir_3313 Amir_3313 Amir_3313 3888426 3888971 - bifunctional deaminase-reductase domain protein PFAM: bifunctional deaminase-reductase domain protein~KEGG: mes:Meso_4307 bifunctional deaminase- reductase-like gene gene3360 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3313 Amir_3314 Amir_3314 Amir_3314 3889055 3889723 - two component transcriptional regulator%2C LuxR family PFAM: response regulator receiver%3B regulatory protein LuxR~SMART: response regulator receiver%3B regulatory protein LuxR~KEGG: scl:sce5431 two-component system response regulator gene gene3361 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3314 Amir_3315 Amir_3315 Amir_3315 3889724 3890905 - histidine kinase PFAM: histidine kinase dimerization and phosphoacceptor region%3B ATP-binding region ATPase domain protein~KEGG: scl:sce5432 putative two-component system sensor kinase gene gene3362 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3315 Amir_3316 Amir_3316 Amir_3316 3891062 3892516 + TAP domain protein PFAM: TAP domain protein%3B alpha/beta hydrolase fold~KEGG: atu:Atu2171 hydrolase gene gene3363 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3316 Amir_3317 Amir_3317 Amir_3317 3892588 3893877 - beta-lactamase class A-like protein KEGG: eli:ELI_05955 putative beta-lactamase gene gene3364 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3317 Amir_3318 Amir_3318 Amir_3318 3893896 3894546 - hypothetical protein gene gene3365 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3318 Amir_3319 Amir_3319 Amir_3319 3894882 3895539 - pseudogene gene3366 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3319 Amir_3320 Amir_3320 Amir_3320 3895604 3896818 - conserved hypothetical protein KEGG: dvm:DvMF_2570 hypothetical protein gene gene3367 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3320 Amir_3321 Amir_3321 Amir_3321 3896815 3898071 - ATPase associated with various cellular activities AAA_3 PFAM: ATPase associated with various cellular activities AAA_3%3B ATPase associated with various cellular activities AAA_5~KEGG: dde:Dde_0483 ATPase gene gene3368 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3321 Amir_3322 Amir_3322 Amir_3322 3898155 3899558 - hypothetical protein KEGG: rsq:Rsph17025_0280 sporulation domain- containing protein gene gene3369 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3322 Amir_3323 Amir_3323 Amir_3323 3899723 3900349 - hypothetical protein gene gene3370 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3323 Amir_3324 Amir_3324 Amir_3324 3900346 3901152 - transcriptional regulator%2C MarR family PFAM: regulatory protein MarR~KEGG: scl:sce6114 hypothetical protein gene gene3371 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3324 Amir_3325 Amir_3325 Amir_3325 3901214 3903346 + Dipeptidyl-peptidase IV PFAM: peptidase S9 prolyl oligopeptidase active site domain protein%3B peptidase S9B dipeptidylpeptidase IV domain protein~KEGG: sus:Acid_0469 peptidase S9B dipeptidylpeptidase IV subunit gene gene3372 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3325 Amir_3326 Amir_3326 Amir_3326 3903655 3904578 + transcriptional regulator%2C AraC family SMART: helix-turn-helix- domain containing protein AraC type~KEGG: aeh:Mlg_1632 AraC family transcriptional regulator gene gene3373 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3326 Amir_3327 Amir_3327 Amir_3327 3904689 3906488 + asparagine synthase PFAM: asparagine synthase~KEGG: swi:Swit_4548 asparagine synthase gene gene3374 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3327 Amir_3328 Amir_3328 Amir_3328 3906485 3906742 + hypothetical protein gene gene3375 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3328 Amir_3329 Amir_3329 Amir_3329 3906754 3907152 + conserved hypothetical protein KEGG: cak:Caul_5192 hypothetical protein gene gene3376 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3329 Amir_3330 Amir_3330 Amir_3330 3907424 3907735 - hypothetical protein gene gene3377 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3330 Amir_3331 Amir_3331 Amir_3331 3907835 3908881 - transcriptional regulator%2C AraC family PFAM: ThiJ/PfpI domain protein%3B helix-turn-helix- domain containing protein AraC type~SMART: helix-turn-helix- domain containing protein AraC type~KEGG: pfl:PFL_2250 transcriptional activator FtrA gene gene3378 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3331 Amir_3332 Amir_3332 Amir_3332 3908959 3909351 + cyclic nucleotide-binding protein PFAM: Cupin 2 conserved barrel domain protein~KEGG: bja:blr5564 hypothetical protein gene gene3379 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3332 Amir_3333 Amir_3333 Amir_3333 3909355 3910038 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: bid:Bind_0033 TetR family transcriptional regulator gene gene3380 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3333 Amir_3334 Amir_3334 Amir_3334 3910141 3911040 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: bid:Bind_0032 short-chain dehydrogenase/reductase SDR gene gene3381 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3334 Amir_3335 Amir_3335 Amir_3335 3911164 3912900 - Cellulase PFAM: glycoside hydrolase family 5%3B protein of unknown function DUF291~KEGG: bha:BH0603 endo-beta-1%2C4-glucanase (celulase B) gene gene3382 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3335 Amir_3336 Amir_3336 Amir_3336 3913209 3914822 + extracellular solute-binding protein family 1 PFAM: extracellular solute-binding protein family 1~KEGG: bha:BH0482 lipoprotein gene gene3383 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3336 Amir_3337 Amir_3337 Amir_3337 3915057 3915663 + pseudogene gene3384 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3337 Amir_3338 Amir_3338 Amir_3338 3915744 3916769 - transcriptional regulator%2C LacI family KEGG: aav:Aave_4199 transcriptional regulator%2C LacI family~PFAM: periplasmic binding protein/LacI transcriptional regulator%3B regulatory protein LacI~SMART: regulatory protein LacI gene gene3385 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3338 Amir_3339 Amir_3339 Amir_3339 3916885 3917724 - NmrA family protein PFAM: NmrA family protein%3B NAD-dependent epimerase/dehydratase%3B dTDP-4-dehydrorhamnose reductase~KEGG: scl:sce8968 nucleotide-diphosphate-sugar epimerase gene gene3386 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3339 Amir_3340 Amir_3340 Amir_3340 3917823 3918200 + transcriptional regulator%2C HxlR family PFAM: helix-turn-helix HxlR type~KEGG: aav:Aave_1296 transcriptional regulator%2C HxlR family gene gene3387 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3340 Amir_3341 Amir_3341 Amir_3341 3918249 3918776 + pseudogene gene3388 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3341 Amir_3342 Amir_3342 Amir_3342 3919105 3919569 + hypothetical protein gene gene3389 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3342 Amir_3343 Amir_3343 Amir_3343 3919639 3920507 + pseudogene gene3390 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3343 Amir_3344 Amir_3344 Amir_3344 3920479 3921129 - hypothetical protein gene gene3391 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3344 Amir_3345 Amir_3345 Amir_3345 3921150 3921938 + alpha/beta hydrolase fold protein PFAM: alpha/beta hydrolase fold~KEGG: pzu:PHZ_c1878 hypothetical protein gene gene3392 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3345 Amir_3346 Amir_3346 Amir_3346 3922119 3922382 + hypothetical protein gene gene3393 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3346 Amir_3347 Amir_3347 Amir_3347 3922438 3922704 - hypothetical protein gene gene3394 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3347 Amir_3348 Amir_3348 Amir_3348 3922879 3923676 - alpha/beta hydrolase fold protein PFAM: alpha/beta hydrolase fold~KEGG: bat:BAS3592 alpha/beta fold family hydrolase gene gene3395 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3348 Amir_3349 Amir_3349 Amir_3349 3923830 3924831 + hypothetical protein KEGG: sus:Acid_6922 natural resistance-associated macrophage protein gene gene3396 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3349 Amir_3350 Amir_3350 Amir_3350 3925037 3925981 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B NAD- dependent epimerase/dehydratase~KEGG: rso:RS05496 putative oxidoreductase protein gene gene3397 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3350 Amir_3351 Amir_3351 Amir_3351 3926044 3926307 - conserved hypothetical protein KEGG: afw:Anae109_3772 hypothetical protein gene gene3398 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3351 Amir_3352 Amir_3352 Amir_3352 3926429 3927757 - Carboxylesterase type B PFAM: Carboxylesterase type B~KEGG: swi:Swit_1148 carboxylesterase%2C type B gene gene3399 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3352 Amir_3353 Amir_3353 Amir_3353 3927789 3928787 - beta-lactamase domain protein PFAM: beta-lactamase domain protein~KEGG: nar:Saro_2457 beta-lactamase-like gene gene3400 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3353 Amir_3354 Amir_3354 Amir_3354 3928866 3929546 - hypothetical protein gene gene3401 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3354 Amir_3355 Amir_3355 Amir_3355 3929878 3930843 - TAP domain protein PFAM: TAP domain protein~KEGG: NACA%2C TEBP%3B nascent polypeptide-associated complex alpha subunit gene gene3402 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3355 Amir_3356 Amir_3356 Amir_3356 3930994 3932274 + histidine kinase PFAM: histidine kinase dimerization and phosphoacceptor region%3B ATP-binding region ATPase domain protein~SMART: ATP-binding region ATPase domain protein~KEGG: scl:sce5432 putative two-component system sensor kinase gene gene3403 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3356 Amir_3357 Amir_3357 Amir_3357 3932285 3932944 + GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: swi:Swit_3205 GCN5-related N- acetyltransferase gene gene3404 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3357 Amir_3358 Amir_3358 Amir_3358 3932954 3934537 - hypothetical protein gene gene3405 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3358 Amir_3359 Amir_3359 Amir_3359 3934640 3935632 - Alcohol dehydrogenase GroES domain protein PFAM: Alcohol dehydrogenase GroES domain protein%3B Alcohol dehydrogenase zinc-binding domain protein~KEGG: bid:Bind_1144 alcohol dehydrogenase gene gene3406 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3359 Amir_3360 Amir_3360 Amir_3360 3935634 3936218 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: scl:sce7471 TetR family transcriptional regulator gene gene3407 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3360 Amir_3361 Amir_3361 Amir_3361 3936259 3936765 - GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: bac:BamMC406_4517 GCN5-related N- acetyltransferase gene gene3408 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3361 Amir_3362 Amir_3362 Amir_3362 3937213 3937773 + bifunctional deaminase-reductase domain protein PFAM: bifunctional deaminase-reductase domain protein~KEGG: mlo:mlr0926 hypothetical protein gene gene3409 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3362 Amir_3363 Amir_3363 Amir_3363 3937820 3938097 - pseudogene gene3410 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3363 Amir_3364 Amir_3364 Amir_3364 3938247 3938614 + pseudogene gene3411 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3364 Amir_3365 Amir_3365 Amir_3365 3938634 3939644 - aldo/keto reductase PFAM: aldo/keto reductase~KEGG: bxe:Bxe_B0085 putative norsolorinic acid reductase gene gene3412 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3365 Amir_3366 Amir_3366 Amir_3366 3939750 3940679 + transcriptional regulator%2C AraC family PFAM: helix-turn-helix- domain containing protein AraC type~SMART: helix-turn-helix- domain containing protein AraC type~KEGG: bur:Bcep18194_C7080 AraC family transcriptional regulator gene gene3413 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3366 Amir_3367 Amir_3367 Amir_3367 3940659 3941189 - hypothetical protein gene gene3414 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3367 Amir_3368 Amir_3368 Amir_3368 3941285 3943633 + Phosphoketolase PFAM: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase~KEGG: mno:Mnod_8717 D-xylulose 5-phosphate/D- fructose 6-phosphate phosphoketolase gene gene3415 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3368 Amir_3369 Amir_3369 Amir_3369 3943630 3944721 + acetate kinase TIGRFAM: acetate kinase~PFAM: acetate and butyrate kinase~KEGG: bsu:BSU29470 acetate kinase gene gene3416 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3369 Amir_3370 Amir_3370 Amir_3370 3944728 3945393 - hypothetical protein gene gene3417 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3370 Amir_3371 Amir_3371 Amir_3371 3945485 3945910 + NUDIX hydrolase PFAM: NUDIX hydrolase~KEGG: oan:Oant_1677 NUDIX hydrolase gene gene3418 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3371 Amir_3372 Amir_3372 Amir_3372 3946003 3946254 + hypothetical protein gene gene3419 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3372 Amir_3373 Amir_3373 Amir_3373 3946558 3947166 + hypothetical protein gene gene3420 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3373 Amir_3374 Amir_3374 Amir_3374 3947232 3947450 + hypothetical protein KEGG: ccv:CCV52592_2062 hypothetical protein gene gene3421 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3374 Amir_3375 Amir_3375 Amir_3375 3947477 3947797 + hypothetical protein gene gene3422 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3375 Amir_3376 Amir_3376 Amir_3376 3947820 3949580 - thiamine pyrophosphate protein TPP binding domain protein PFAM: thiamine pyrophosphate protein TPP binding domain protein%3B thiamine pyrophosphate protein central region%3B thiamine pyrophosphate protein domain protein TPP- binding~KEGG: scl:sce2120 pyruvate decarboxylase gene gene3423 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3376 Amir_3377 Amir_3377 Amir_3377 3949577 3950224 - Alcohol dehydrogenase GroES domain protein PFAM: Alcohol dehydrogenase GroES domain protein~KEGG: noc:Noc_0592 zinc-containing alcohol dehydrogenase superfamily protein gene gene3424 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3377 Amir_3378 Amir_3378 Amir_3378 3950401 3951231 - Fibronectin type III domain protein PFAM: Fibronectin type III domain protein~SMART: Fibronectin type III domain protein~KEGG: spe:Spro_1223 glycoside hydrolase family protein gene gene3425 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3378 Amir_3379 Amir_3379 Amir_3379 3951338 3952585 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: csa:Csal_3232 major facilitator superfamily MFS_1 gene gene3426 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3379 Amir_3380 Amir_3380 Amir_3380 3952653 3953552 + transcriptional regulator%2C LysR family PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: smt:Smal_0276 transcriptional regulator%2C LysR family gene gene3427 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3380 Amir_3381 Amir_3381 Amir_3381 3953563 3954576 - conserved hypothetical protein KEGG: hypothetical protein gene gene3428 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3381 Amir_3382 Amir_3382 Amir_3382 3954765 3955766 + transcriptional regulator%2C LacI family PFAM: regulatory protein LacI~SMART: regulatory protein LacI~KEGG: atc:AGR_L_1215 hypothetical protein gene gene3429 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3382 Amir_3383 Amir_3383 Amir_3383 3955763 3957355 + conserved hypothetical protein KEGG: atu:Atu4253 hypothetical protein gene gene3430 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3383 Amir_3384 Amir_3384 Amir_3384 3957355 3959562 + Hydantoinase/oxoprolinase PFAM: Hydantoinase/oxoprolinase%3B Hydantoinaseoxoprolinase domain protein~KEGG: scl:sce2622 N-methylhydantoinase A%2C beta subunit gene gene3431 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3384 Amir_3385 Amir_3385 Amir_3385 3959559 3960107 + hypothetical protein gene gene3432 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3385 Amir_3386 Amir_3386 Amir_3386 3960111 3961382 + TRAP C4-dicarboxylate transport system permease DctM subunit PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit%3B Citrate transporter~KEGG: azc:AZC_1182 H+/citrate symporter gene gene3433 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3386 Amir_3387 Amir_3387 Amir_3387 3961438 3962070 - hypothetical protein KEGG: Muc19%3B mucin 19 gene gene3434 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3387 Amir_3388 Amir_3388 Amir_3388 3962558 3963139 - NAD(P)H dehydrogenase (quinone) PFAM: NAD(P)H dehydrogenase (quinone)%3B NADPH- dependent FMN reductase~KEGG: aav:Aave_3540 NAD(P)H dehydrogenase (quinone) gene gene3435 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3388 Amir_3389 Amir_3389 Amir_3389 3963237 3963800 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: bpt:Bpet2251 TetR family transcriptional regulator gene gene3436 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3389 Amir_3390 Amir_3390 Amir_3390 3963835 3964180 - pseudogene gene3437 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3390 Amir_3391 Amir_3391 Amir_3391 3964177 3964728 - GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: scl:sce1138 acetyltransferase gene gene3438 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3391 Amir_3392 Amir_3392 Amir_3392 3964803 3965003 - hypothetical protein gene gene3439 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3392 Amir_3393 Amir_3393 Amir_3393 3965110 3965807 + pseudogene gene3440 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3393 Amir_3394 Amir_3394 Amir_3394 3965998 3968550 + protein of unknown function DUF470 PFAM: protein of unknown function DUF470%3B protein of unknown function DUF471%3B protein of unknown function DUF472~KEGG: acp:A2cp1_1693 protein of unknown function DUF470 gene gene3441 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3394 Amir_3395 Amir_3395 Amir_3395 3968568 3969872 + putative esterase PFAM: putative esterase~KEGG: bcm:Bcenmc03_5695 putative esterase gene gene3442 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3395 Amir_3396 Amir_3396 Amir_3396 3969917 3970417 - hypothetical protein gene gene3443 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3396 Amir_3397 Amir_3397 Amir_3397 3970759 3972315 + Amidohydrolase 3 PFAM: Amidohydrolase 3~KEGG: rce:RC1_3136 amidohydrolase family protein gene gene3444 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3397 Amir_3398 Amir_3398 Amir_3398 3972425 3972817 - beta-alanyl-CoA:ammonia lyase KEGG: mxa:MXAN_4385 beta-alanyl-CoA:ammonia lyase gene gene3445 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3398 Amir_3399 Amir_3399 Amir_3399 3973078 3973431 + transcriptional regulator%2C GntR family PFAM: regulatory protein GntR HTH~SMART: regulatory protein GntR HTH~KEGG: bcy:Bcer98_1077 regulatory protein GntR HTH gene gene3446 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3399 Amir_3400 Amir_3400 Amir_3400 3973462 3974208 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR%3B Tetracyclin repressor domain protein~KEGG: mxa:MXAN_2794 transcriptional regulator%2C TetR family gene gene3447 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3400 Amir_3401 Amir_3401 Amir_3401 3974186 3974374 - phage shock protein C%2C PspC PFAM: PspC domain protein~KEGG: xom:XOO_2087 hypothetical protein gene gene3448 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3401 Amir_3402 Amir_3402 Amir_3402 3974730 3975521 + glycosyl transferase family 2 PFAM: glycosyl transferase family 2~KEGG: ank:AnaeK_2710 glycosyl transferase family 2 gene gene3449 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3402 Amir_3403 Amir_3403 Amir_3403 3975729 3976073 - hypothetical protein gene gene3450 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3403 Amir_3404 Amir_3404 Amir_3404 3976561 3977085 - NUDIX hydrolase PFAM: NUDIX hydrolase~KEGG: nha:Nham_1987 NUDIX hydrolase gene gene3451 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3404 Amir_3405 Amir_3405 Amir_3405 3977280 3977507 - hypothetical protein gene gene3452 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3405 Amir_3406 Amir_3406 Amir_3406 3977708 3978679 - putative transcriptional regulator%2C PucR family KEGG: hypothetical protein gene gene3453 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3406 Amir_3407 Amir_3407 Amir_3407 3978995 3979573 - transcriptional regulator%2C XRE family PFAM: helix-turn-helix domain protein%3B Cupin 2 conserved barrel domain protein~SMART: helix-turn-helix domain protein~KEGG: scl:sce6511 putative transcriptional regulator gene gene3454 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3407 Amir_3408 Amir_3408 Amir_3408 3979646 3980365 - Thymidine kinase PFAM: thymidine kinase~KEGG: aha:AHA_1822 thymidine kinase gene gene3455 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3408 Amir_3409 Amir_3409 Amir_3409 3980471 3980785 + transcriptional regulator%2C PadR-like family PFAM: transcriptional regulator PadR family protein~KEGG: sus:Acid_0652 PadR family transcriptional regulator gene gene3456 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3409 Amir_3410 Amir_3410 Amir_3410 3980782 3981567 + hypothetical protein KEGG: ret:RHE_CH02708 hypothetical protein gene gene3457 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3410 Amir_3411 Amir_3411 Amir_3411 3981574 3982983 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: pca:Pcar_1854 major facilitator superfamily permease/BtlA-like gene gene3458 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3411 Amir_3412 Amir_3412 Amir_3412 3983048 3983824 - glycerophosphoryl diester phosphodiesterase PFAM: glycerophosphoryl diester phosphodiesterase~KEGG: rce:RC1_2887 glycerophosphoryl diester phosphodiesterase%2C putative gene gene3459 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3412 Amir_3413 Amir_3413 Amir_3413 3983892 3984353 + hypothetical protein KEGG: scl:sce6697 putative transcriptional regulator gene gene3460 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3413 Amir_3414 Amir_3414 Amir_3414 3984443 3986464 + diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) KEGG: tbd:Tbd_2428 diguanylate cyclase/phosphodiesterase~TIGRFAM: diguanylate cyclase~PFAM: EAL domain protein%3B PAS fold-3 domain protein%3B GGDEF domain containing protein%3B PAS fold-4 domain protein~SMART: EAL domain protein%3B GGDEF domain containing protein%3B PAS domain containing protein gene gene3461 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3414 Amir_3415 Amir_3415 Amir_3415 3986488 3987147 + hypothetical protein KEGG: she:Shewmr4_3786 glyoxalase/bleomycin resistance protein/dioxygenase gene gene3462 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3415 Amir_3416 Amir_3416 Amir_3416 3987208 3987663 - pyridoxamine 5'-phosphate oxidase-related FMN- binding PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding gene gene3463 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3416 Amir_3417 Amir_3417 Amir_3417 3987700 3988560 - Ku domain containing protein KEGG: afw:Anae109_1008 Ku family containing protein~TIGRFAM: Ku protein~PFAM: Ku domain protein~SMART: Ku domain protein gene gene3464 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3417 Amir_3418 Amir_3418 Amir_3418 3988699 3989256 - GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: hne:HNE_3215 acetyltransferase gene gene3465 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3418 Amir_3419 Amir_3419 Amir_3419 3989388 3990209 + hypothetical protein gene gene3466 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3419 Amir_3420 Amir_3420 Amir_3420 3990255 3990686 + protein of unknown function DUF107 PFAM: protein of unknown function DUF107~KEGG: sfu:Sfum_2309 protein of unknown function DUF107 gene gene3467 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3420 Amir_3421 Amir_3421 Amir_3421 3990698 3991906 + band 7 protein PFAM: band 7 protein~SMART: band 7 protein~KEGG: bcy:Bcer98_1560 band 7 protein gene gene3468 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3421 Amir_3422 Amir_3422 Amir_3422 3991957 3992145 - hypothetical protein gene gene3469 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3422 Amir_3423 Amir_3423 Amir_3423 3992168 3992527 + transcriptional regulator%2C ArsR family PFAM: regulatory protein ArsR~SMART: regulatory protein ArsR~KEGG: hha:Hhal_1112 regulatory protein%2C ArsR gene gene3470 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3423 Amir_3424 Amir_3424 Amir_3424 3992524 3993570 + arsenical-resistance protein TIGRFAM: arsenical-resistance protein~PFAM: Bile acid:sodium symporter~KEGG: arsenical-resistance protein precursor%3B K03325 arsenite transporter%2C ACR3 family gene gene3471 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3424 Amir_3425 Amir_3425 Amir_3425 3993621 3994031 + Protein-tyrosine phosphatase%2C low molecular weight PFAM: Protein-tyrosine phosphatase%2C low molecular weight~SMART: Protein-tyrosine phosphatase%2C low molecular weight~KEGG: arsenate reductase ArsC%3B K03741 arsenate reductase gene gene3472 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3425 Amir_3426 Amir_3426 Amir_3426 3994103 3995170 + hypothetical protein KEGG: bph:Bphy_3936 zinc finger SWIM domain- containing protein gene gene3473 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3426 Amir_3427 Amir_3427 Amir_3427 3995238 3995741 + pseudogene gene3474 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3427 Amir_3428 Amir_3428 Amir_3428 3995887 3996168 + ANTAR domain protein PFAM: ANTAR domain protein gene gene3475 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3428 Amir_3429 Amir_3429 Amir_3429 3996197 3997570 - Amidase PFAM: Amidase~KEGG: met:M446_0555 amidase gene gene3476 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3429 Amir_3430 Amir_3430 Amir_3430 3997770 3998660 + hypothetical protein KEGG: mag:amb0998 hypothetical protein gene gene3477 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3430 Amir_3431 Amir_3431 Amir_3431 3998861 3999451 + hypothetical protein KEGG: ppg:PputGB1_1457 hypothetical protein gene gene3478 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3431 Amir_3432 Amir_3432 Amir_3432 3999559 4000083 - protein of unknown function DUF1470 PFAM: protein of unknown function DUF1470~KEGG: jan:Jann_2411 hypothetical protein gene gene3479 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3432 Amir_3433 Amir_3433 Amir_3433 4000098 4000286 + hypothetical protein gene gene3480 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3433 Amir_3434 Amir_3434 Amir_3434 4000299 4000964 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: ade:Adeh_2880 TetR family transcriptional regulator gene gene3481 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3434 Amir_3435 Amir_3435 Amir_3435 4001187 4001552 - hypothetical protein gene gene3482 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3435 Amir_3436 Amir_3436 Amir_3436 4001870 4002547 + hypothetical protein KEGG: hypothetical protein gene gene3483 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3436 Amir_3437 Amir_3437 Amir_3437 4002535 4003248 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B KR domain protein~KEGG: azc:AZC_4194 dehydrogenases gene gene3484 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3437 Amir_3438 Amir_3438 Amir_3438 4003208 4004002 - methionine aminopeptidase%2C type I TIGRFAM: methionine aminopeptidase%2C type I~PFAM: peptidase M24~KEGG: ank:AnaeK_1955 methionine aminopeptidase%2C type I gene gene3485 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3438 Amir_3439 Amir_3439 Amir_3439 4004049 4004309 + transcriptional regulator%2C XRE family PFAM: helix-turn-helix domain protein~SMART: helix-turn-helix domain protein~KEGG: mxa:MXAN_2709 putative transcriptional regulator gene gene3486 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3439 Amir_3440 Amir_3440 Amir_3440 4004327 4005337 - Helix-turn-helix type 11 domain protein PFAM: Helix-turn-helix type 11 domain protein%3B regulatory protein DeoR%3B protein of unknown function UPF0074~SMART: regulatory protein DeoR~KEGG: scl:sce5223 DeoR family transcriptional regulator gene gene3487 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3440 Amir_3441 Amir_3441 Amir_3441 4005370 4006656 + monooxygenase FAD-binding PFAM: monooxygenase FAD-binding%3B FAD dependent oxidoreductase~KEGG: bbt:BBta_2587 putative monoxygenase gene gene3488 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3441 Amir_3442 Amir_3442 Amir_3442 4006769 4007518 - transcriptional regulator%2C DeoR family PFAM: regulatory protein DeoR%3B Helix-turn-helix type 11 domain protein~SMART: regulatory protein DeoR~KEGG: kpe:KPK_3034 transcriptional regulator%2C DeoR family gene gene3489 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3442 Amir_3443 Amir_3443 Amir_3443 4007579 4009156 + NUDIX hydrolase PFAM: NUDIX hydrolase~KEGG: hypothetical protein LOC100149318 gene gene3490 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3443 Amir_3444 Amir_3444 Amir_3444 4009128 4009751 - hypothetical protein gene gene3491 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3444 Amir_3445 Amir_3445 Amir_3445 4009778 4010566 - Exonuclease RNase T and DNA polymerase III PFAM: Exonuclease RNase T and DNA polymerase III~SMART: Exonuclease~KEGG: scl:sce7572 DNA polymerase III%2C epsilon subunit gene gene3492 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3445 Amir_3446 Amir_3446 Amir_3446 4010670 4010912 - hypothetical protein gene gene3493 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3446 Amir_3447 Amir_3447 Amir_3447 4011959 4012933 + integrase family protein PFAM: integrase family protein~KEGG: mag:amb4250 site-specific tyrosine recombinase XerC gene gene3494 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3447 Amir_3448 Amir_3448 Amir_3448 4013029 4013874 + transcriptional regulator%2C AraC family SMART: helix-turn-helix- domain containing protein AraC type~KEGG: scl:sce1871 AraC family transcriptional regulator gene gene3495 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3448 Amir_3449 Amir_3449 Amir_3449 4013941 4014522 + hypothetical protein KEGG: cvi:CV_3295 hypothetical protein gene gene3496 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3449 Amir_3450 Amir_3450 Amir_3450 4014596 4015054 - hypothetical protein gene gene3497 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3450 Amir_3451 Amir_3451 Amir_3451 4015301 4016104 - hypothetical protein gene gene3498 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3451 Amir_3452 Amir_3452 Amir_3452 4016110 4016676 - hypothetical protein gene gene3499 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3452 Amir_3453 Amir_3453 Amir_3453 4016788 4018710 + peptidase S9 prolyl oligopeptidase active site domain protein PFAM: peptidase S9 prolyl oligopeptidase active site domain protein~KEGG: msl:Msil_1579 peptidase S9 prolyl oligopeptidase active site domain protein gene gene3500 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3453 Amir_3454 Amir_3454 Amir_3454 4018707 4019609 + peptidase U61 LD-carboxypeptidase A PFAM: peptidase U61 LD-carboxypeptidase A~KEGG: dal:Dalk_3806 peptidase U61 LD- carboxypeptidase A gene gene3501 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3454 Amir_3455 Amir_3455 Amir_3455 4019625 4019768 + hypothetical protein gene gene3502 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3455 Amir_3456 Amir_3456 Amir_3456 4019738 4020271 - hypothetical protein gene gene3503 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3456 Amir_3457 Amir_3457 Amir_3457 4020489 4021326 + pseudogene gene3504 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3457 Amir_3458 Amir_3458 Amir_3458 4021383 4022140 + pseudogene gene3505 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3458 Amir_3459 Amir_3459 Amir_3459 4022261 4022911 + HAD-superfamily hydrolase%2C subfamily IA%2C variant 3 TIGRFAM: HAD-superfamily hydrolase%2C subfamily IA%2C variant 3~PFAM: Haloacid dehalogenase domain protein hydrolase~KEGG: hypothetical protein gene gene3506 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3459 Amir_3460 Amir_3460 Amir_3460 4022908 4023942 + aminoglycoside phosphotransferase PFAM: aminoglycoside phosphotransferase~KEGG: mrd:Mrad2831_1820 aminoglycoside phosphotransferase gene gene3507 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3460 Amir_3461 Amir_3461 Amir_3461 4023942 4025150 + acyl-CoA dehydrogenase domain protein PFAM: acyl-CoA dehydrogenase domain protein%3B Acyl- CoA dehydrogenase type 2 domain~KEGG: pen:PSEEN3343 acyl-CoA dehydrogenase gene gene3508 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3461 Amir_3462 Amir_3462 Amir_3462 4025432 4025808 - pseudogene gene3509 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3462 Amir_3463 Amir_3463 Amir_3463 4025872 4027512 - ABC transporter related PFAM: ABC transporter related%3B Oligopeptide/dipeptide ABC transporter domain protein~SMART: AAA ATPase~KEGG: cti:RALTA_B1385 dipeptide ABC transporter atp_binding domain gene gene3510 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3463 Amir_3464 Amir_3464 Amir_3464 4027509 4028390 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: mlo:mlr6084 ABC transporter%2C permease gene gene3511 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3464 Amir_3465 Amir_3465 Amir_3465 4028387 4029346 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: mlo:mlr6083 ABC transporter%2C permease gene gene3512 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3465 Amir_3466 Amir_3466 Amir_3466 4029343 4031133 - extracellular solute-binding protein family 5 PFAM: extracellular solute-binding protein family 5~KEGG: mlo:mlr6082 ABC transporter%2C binding protein component gene gene3513 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3466 Amir_3467 Amir_3467 Amir_3467 4031227 4032054 + peptidase M55 D-aminopeptidase PFAM: peptidase M55 D-aminopeptidase~KEGG: mrd:Mrad2831_3239 peptidase M55 D- aminopeptidase gene gene3514 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3467 Amir_3468 Amir_3468 Amir_3468 4032060 4033346 + peptidase M20 PFAM: peptidase M20%3B peptidase dimerization domain protein~KEGG: dal:Dalk_4445 peptidase M20 gene gene3515 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3468 Amir_3469 Amir_3469 Amir_3469 4033460 4034665 + hypothetical protein gene gene3516 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3469 Amir_3470 Amir_3470 Amir_3470 4034802 4035797 + transcriptional regulator%2C LacI family KEGG: sml:Smlt2568 putative LacI-family transcriptional regulator~PFAM: periplasmic binding protein/LacI transcriptional regulator%3B regulatory protein LacI~SMART: regulatory protein LacI gene gene3517 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3470 Amir_3471 Amir_3471 Amir_3471 4035802 4036626 + conserved hypothetical protein KEGG: scl:sce1247 hypothetical protein gene gene3518 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3471 Amir_3472 Amir_3472 Amir_3472 4036682 4037923 + extracellular solute-binding protein family 1 PFAM: extracellular solute-binding protein family 1~KEGG: bur:Bcep18194_C6933 ABC sugar transporter%2C periplasmic ligand binding protein gene gene3519 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3472 Amir_3473 Amir_3473 Amir_3473 4037927 4038796 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: bur:Bcep18194_C6934 ABC sugar transporter%2C inner membrane subunit gene gene3520 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3473 Amir_3474 Amir_3474 Amir_3474 4038790 4039632 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: bur:Bcep18194_C6935 ABC sugar transporter%2C inner membrane subunit gene gene3521 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3474 Amir_3475 Amir_3475 Amir_3475 4039808 4041025 - integrase family protein PFAM: integrase family protein~KEGG: gme:Gmet_1427 tyrosine recombinase XerD subunit gene gene3522 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3475 Amir_3476 Amir_3476 Amir_3476 4041194 4042273 + conserved hypothetical protein KEGG: hypothetical protein gene gene3523 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3476 Amir_3477 Amir_3477 Amir_3477 4042404 4044617 - transcriptional regulator%2C XRE family PFAM: helix-turn-helix domain protein~SMART: helix-turn-helix domain protein~KEGG: scl:sce3873 WD repeat-containing protein gene gene3524 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3477 Amir_3478 Amir_3478 Amir_3478 4044754 4045824 + putative esterase PFAM: putative esterase~KEGG: mxa:MXAN_4935 putative esterase gene gene3525 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3478 Amir_3479 Amir_3479 Amir_3479 4045880 4047280 - hypothetical protein KEGG: bcj:BCAS0321a hypothetical protein gene gene3526 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3479 Amir_3480 Amir_3480 Amir_3480 4047277 4047582 - hypothetical protein gene gene3527 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3480 Amir_3481 Amir_3481 Amir_3481 4047579 4047977 - hypothetical protein gene gene3528 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3481 Amir_3482 Amir_3482 Amir_3482 4047974 4048744 - cytochrome c-type biogenesis protein CycH KEGG: pzu:PHZ_c2693 cytochrome c-type biogenesis protein CycH gene gene3529 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3482 Amir_3483 Amir_3483 Amir_3483 4048741 4049082 - hypothetical protein gene gene3530 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3483 Amir_3484 Amir_3484 Amir_3484 4049079 4050230 - hypothetical protein KEGG: scl:sce3028 protein kinase gene gene3531 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3484 Amir_3485 Amir_3485 Amir_3485 4050544 4051353 + conserved hypothetical protein KEGG: pau:PA14_07050 hypothetical protein gene gene3532 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3485 Amir_3486 Amir_3486 Amir_3486 4051350 4052294 - Helix-turn-helix type 11 domain protein PFAM: Helix-turn-helix type 11 domain protein~KEGG: scl:sce5223 DeoR family transcriptional regulator gene gene3533 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3486 Amir_3487 Amir_3487 Amir_3487 4052376 4053401 + aldo/keto reductase PFAM: aldo/keto reductase~KEGG: rle:RL2983 putative aldo/keto reductase gene gene3534 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3487 Amir_3488 Amir_3488 Amir_3488 4053409 4054476 + conserved hypothetical protein KEGG: afw:Anae109_3510 hypothetical protein gene gene3535 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3488 Amir_3489 Amir_3489 Amir_3489 4054712 4055314 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: gdi:GDI2777 putative transcription regulator gene gene3536 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3489 Amir_3490 Amir_3490 Amir_3490 4055365 4056312 + Alcohol dehydrogenase zinc-binding domain protein PFAM: Alcohol dehydrogenase zinc-binding domain protein%3B Alcohol dehydrogenase GroES domain protein~KEGG: bid:Bind_1477 alcohol dehydrogenase gene gene3537 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3490 Amir_3491 Amir_3491 Amir_3491 4056605 4056979 - hypothetical protein gene gene3538 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3491 Amir_3492 Amir_3492 Amir_3492 4057238 4057711 + NUDIX hydrolase PFAM: NUDIX hydrolase~KEGG: bba:Bd2755 putative ATP/GTP-binding protein gene gene3539 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3492 Amir_3493 Amir_3493 Amir_3493 4057749 4058150 - Endoribonuclease L-PSP PFAM: Endoribonuclease L-PSP~KEGG: mch:Mchl_5535 endoribonuclease L-PSP gene gene3540 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3493 Amir_3494 Amir_3494 Amir_3494 4058258 4059292 + Helix-turn-helix type 11 domain protein PFAM: Helix-turn-helix type 11 domain protein~KEGG: mxa:MXAN_2553 hypothetical protein gene gene3541 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3494 Amir_3495 Amir_3495 Amir_3495 4059367 4060854 + cellulose-binding family II PFAM: cellulose-binding family II%3B lipolytic protein G-D-S-L family~SMART: cellulose-binding family II~KEGG: ccs:CCNA_02538 endoglucanase E gene gene3542 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3495 Amir_3496 Amir_3496 Amir_3496 4061059 4061430 - transcriptional regulator%2C MerR family PFAM: regulatory protein MerR~SMART: regulatory protein MerR~KEGG: hha:Hhal_0914 putative transcriptional regulator%2C MerR family gene gene3543 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3496 Amir_3497 Amir_3497 Amir_3497 4062172 4062855 - transcriptional regulator%2C MerR family PFAM: regulatory protein MerR~SMART: regulatory protein MerR~KEGG: bcj:BCAM0093 MerR family regulatory protein gene gene3544 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3497 Amir_3498 Amir_3498 Amir_3498 4062978 4064102 + Erythromycin esterase PFAM: Erythromycin esterase~KEGG: swi:Swit_1817 erythromycin esterase gene gene3545 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3498 Amir_3499 Amir_3499 Amir_3499 4064164 4064673 - hypothetical protein gene gene3546 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3499 Amir_3500 Amir_3500 Amir_3500 4064808 4065212 - hypothetical protein KEGG: aeh:Mlg_0162 hypothetical protein gene gene3547 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3500 Amir_3501 Amir_3501 Amir_3501 4065312 4066679 + Methyltransferase type 12 PFAM: Methyltransferase type 12%3B Methyltransferase type 11~KEGG: scl:sce2734 ubiquinone/menaquinone biosynthesis methyltransferase UbiE gene gene3548 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3501 Amir_3502 Amir_3502 Amir_3502 4066679 4069183 + metallophosphoesterase PFAM: metallophosphoesterase~KEGG: scl:sce2733 bis(5'-nucleosyl)- tetraphosphatase (symmetrical) gene gene3549 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3502 Amir_3503 Amir_3503 Amir_3503 4069250 4069828 + pyridoxamine 5'-phosphate oxidase-related FMN- binding PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding~KEGG: scl:sce2276 hypothetical protein gene gene3550 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3503 Amir_3504 Amir_3504 Amir_3504 4069869 4071416 - monooxygenase FAD-binding PFAM: monooxygenase FAD-binding%3B FAD dependent oxidoreductase~KEGG: scl:sce4973 putative monooxygenase gene gene3551 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3504 Amir_3505 Amir_3505 Amir_3505 4071577 4072098 + conserved hypothetical protein PFAM: conserved hypothetical protein~KEGG: dac:Daci_5761 hypothetical protein gene gene3552 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3505 Amir_3506 Amir_3506 Amir_3506 4072095 4072832 - metallophosphoesterase PFAM: metallophosphoesterase~KEGG: azc:AZC_0786 putative ICC protein gene gene3553 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3506 Amir_3507 Amir_3507 Amir_3507 4072942 4074201 + hypothetical protein KEGG: hypothetical protein gene gene3554 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3507 Amir_3508 Amir_3508 Amir_3508 4074198 4075157 + extracellular solute-binding protein family 3 PFAM: extracellular solute-binding protein family 3~SMART: extracellular solute-binding protein family 3%3B ionotropic glutamate receptor~KEGG: bcy:Bcer98_0541 extracellular solute-binding protein gene gene3555 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3508 Amir_3509 Amir_3509 Amir_3509 4075249 4078284 + serine/threonine protein kinase PFAM: tyrosine protein kinase~SMART: serine/threonine protein kinase~KEGG: scl:sce1432 protein kinase gene gene3556 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3509 Amir_3510 Amir_3510 Amir_3510 4078281 4079252 + protein serine/threonine phosphatase PFAM: Protein phosphatase 2C-like~SMART: protein phosphatase 2C domain protein~KEGG: xau:Xaut_0996 protein phosphatase 2C-like protein gene gene3557 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3510 Amir_3511 Amir_3511 Amir_3511 4079400 4079885 + transcriptional regulator%2C MarR family PFAM: regulatory protein MarR~SMART: regulatory protein MarR~KEGG: cti:RALTA_A0035 putative transcriptional regulator%2C MarR family gene gene3558 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3511 Amir_3512 Amir_3512 Amir_3512 4080150 4081301 + cytochrome P450-like protein KEGG: rpt:Rpal_0425 cytochrome P450 gene gene3559 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3512 Amir_3513 Amir_3513 Amir_3513 4081396 4081675 - pseudogene gene3560 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3513 Amir_3514 Amir_3514 Amir_3514 4081800 4082084 + pseudogene gene3561 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3514 Amir_3515 Amir_3515 Amir_3515 4082150 4083100 - aminoglycoside phosphotransferase PFAM: aminoglycoside phosphotransferase gene gene3562 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3515 Amir_3516 Amir_3516 Amir_3516 4083149 4084171 - Alcohol dehydrogenase zinc-binding domain protein PFAM: Alcohol dehydrogenase zinc-binding domain protein~KEGG: pla:Plav_0381 alcohol dehydrogenase gene gene3563 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3516 Amir_3517 Amir_3517 Amir_3517 4084280 4085197 - transcriptional regulator%2C AraC family PFAM: helix-turn-helix- domain containing protein AraC type~SMART: helix-turn-helix- domain containing protein AraC type~KEGG: mpt:Mpe_A3662 AraC family transcriptional regulator gene gene3564 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3517 Amir_3518 Amir_3518 Amir_3518 4085194 4089114 - ATP-dependent helicase HrpA KEGG: ses:SARI_01345 ATP-dependent RNA helicase HrpA~TIGRFAM: ATP-dependent helicase HrpA~PFAM: helicase-associated domain protein%3B protein of unknown function DUF1605%3B helicase domain protein~SMART: DEAD-like helicase%3B helicase domain protein%3B AAA ATPase gene gene3565 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3518 Amir_3519 Amir_3519 Amir_3519 4089281 4090030 - conserved hypothetical protein KEGG: cvi:CV_0390 hypothetical protein gene gene3566 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3519 Amir_3520 Amir_3520 Amir_3520 4090116 4090481 + Glyoxalase/bleomycin resistance protein/dioxygenase PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase~KEGG: bja:blr4238 hypothetical protein gene gene3567 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3520 Amir_3521 Amir_3521 Amir_3521 4090920 4091606 - Phosphoglycerate mutase PFAM: Phosphoglycerate mutase~KEGG: met:M446_2115 phosphoglycerate mutase gene gene3568 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3521 Amir_3522 Amir_3522 Amir_3522 4091743 4092567 - undecaprenol kinase KEGG: atc:AGR_C_1833 undecaprenyl-diphosphatase~TIGRFAM: undecaprenol kinase~PFAM: Bacitracin resistance protein BacA gene gene3569 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3522 Amir_3523 Amir_3523 Amir_3523 4092564 4093613 - Luciferase-like monooxygenase PFAM: Luciferase-like monooxygenase~KEGG: pzu:PHZ_c2543 5%2C10- methylenetetrahydromethanopterin reductase gene gene3570 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3523 Amir_3524 Amir_3524 Amir_3524 4093675 4094640 + aldo/keto reductase PFAM: aldo/keto reductase~KEGG: scl:sce4235 oxidoreductase gene gene3571 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3524 Amir_3525 Amir_3525 Amir_3525 4094704 4095945 - hypothetical protein KEGG: FAP75%3B flagellar associated protein gene gene3572 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3525 Amir_3526 Amir_3526 Amir_3526 4096111 4097076 + hypothetical protein KEGG: scl:sce2139 hypothetical protein gene gene3573 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3526 Amir_3527 Amir_3527 Amir_3527 4097073 4097303 + hypothetical protein gene gene3574 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3527 Amir_3528 Amir_3528 Amir_3528 4097670 4098797 - protein of unknown function DUF450 PFAM: protein of unknown function DUF450~KEGG: pmy:Pmen_3692 hypothetical protein gene gene3575 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3528 Amir_3529 Amir_3529 Amir_3529 4099050 4099529 + GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: rpd:RPD_1351 GCN5-related N-acetyltransferase gene gene3576 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3529 Amir_3530 Amir_3530 Amir_3530 4099768 4100571 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR%3B Tetracyclin repressor domain protein~KEGG: scl:sce6697 putative transcriptional regulator gene gene3577 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3530 Amir_3531 Amir_3531 Amir_3531 4100650 4102914 + ABC transporter related PFAM: ABC transporter related~KEGG: scl:sce6315 excinuclease ABC subunit A gene gene3578 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3531 Amir_3532 Amir_3532 Amir_3532 4103007 4103780 + FAD-binding 9 siderophore-interacting domain protein PFAM: FAD-binding 9 siderophore-interacting domain protein%3B Siderophore-interacting protein~KEGG: mxa:MXAN_3639 iron-chelator utilization protein gene gene3579 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3532 Amir_3533 Amir_3533 Amir_3533 4103936 4107130 - transcriptional regulator%2C LuxR family PFAM: regulatory protein LuxR%3B Sigma-70 region 4 type 2%3B Tetratricopeptide TPR_4~SMART: regulatory protein LuxR~KEGG: SNF2 superfamily protein gene gene3580 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3533 Amir_3534 Amir_3534 Amir_3534 4107893 4108639 + transcriptional regulator%2C IclR family PFAM: Transcriptional regulator IclR%3B regulatory protein IclR~SMART: regulatory protein IclR~KEGG: lch:Lcho_2886 IclR family transcriptional regulator gene gene3581 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3534 Amir_3535 Amir_3535 Amir_3535 4108709 4109452 + hypothetical protein gene gene3582 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3535 Amir_3536 Amir_3536 Amir_3536 4109560 4110729 + cellulose-binding family II PFAM: cellulose-binding family II~SMART: cellulose-binding family II~KEGG: hypothetical protein gene gene3583 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3536 Amir_3537 Amir_3537 Amir_3537 4110841 4111917 + Ricin B lectin PFAM: Ricin B lectin%3B lipolytic protein G-D-S-L family~SMART: Ricin B lectin~KEGG: hypothetical protein gene gene3584 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3537 Amir_3538 Amir_3538 Amir_3538 4112009 4112995 + extracellular solute-binding protein family 3 PFAM: extracellular solute-binding protein family 3~SMART: extracellular solute-binding protein family 3~KEGG: bsu:BSU27440 glutamine ABC transporter (glutamine-binding protein) gene gene3585 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3538 Amir_3539 Amir_3539 Amir_3539 4113000 4114049 + hypothetical protein gene gene3586 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3539 Amir_3540 Amir_3540 Amir_3540 4114114 4114485 - hypothetical protein gene gene3587 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3540 Amir_3541 Amir_3541 Amir_3541 4114612 4115649 + alanine dehydrogenase/PNT domain protein PFAM: alanine dehydrogenase/PNT domain protein~KEGG: sil:SPO3307 saccharopine dehydrogenase%2C putative gene gene3588 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3541 Amir_3542 Amir_3542 Amir_3542 4115642 4116790 + Saccharopine dehydrogenase PFAM: Saccharopine dehydrogenase%3B 6- phosphogluconate dehydrogenase NAD-binding~KEGG: sit:TM1040_0106 saccharopine dehydrogenase (NADP+%2C L-glutamate forming) gene gene3589 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3542 Amir_3543 Amir_3543 Amir_3543 4116938 4117349 + pseudogene gene3590 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3543 Amir_3544 Amir_3544 Amir_3544 4117655 4119286 + hypothetical protein KEGG: scl:sce3550 hypothetical protein gene gene3591 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3544 Amir_3545 Amir_3545 Amir_3545 4119289 4119915 - Uracil-DNA glycosylase superfamily PFAM: Uracil-DNA glycosylase superfamily~KEGG: met:M446_1657 uracil-DNA glycosylase superfamily protein gene gene3592 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3545 Amir_3546 Amir_3546 Amir_3546 4120025 4120546 - hypothetical protein gene gene3593 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3546 Amir_3547 Amir_3547 Amir_3547 4120859 4122058 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: atc:AGR_C_1839 hypothetical protein gene gene3594 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3547 Amir_3548 Amir_3548 Amir_3548 4122135 4122650 + hypothetical protein gene gene3595 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3548 Amir_3549 Amir_3549 Amir_3549 4122661 4123149 - GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: mrd:Mrad2831_3652 GCN5-related N- acetyltransferase gene gene3596 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3549 Amir_3550 Amir_3550 Amir_3550 4123340 4124458 + glycoside hydrolase family 25 PFAM: glycoside hydrolase family 25~SMART: glycoside hydrolase family 25~KEGG: hypothetical protein gene gene3597 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3550 Amir_3551 Amir_3551 Amir_3551 4124841 4126031 - peptidase S8 and S53 subtilisin kexin sedolisin PFAM: peptidase S8 and S53 subtilisin kexin sedolisin%3B proteinase inhibitor I9 subtilisin propeptide~KEGG: mca:MCA0875 serine protease gene gene3598 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3551 Amir_3552 Amir_3552 Amir_3552 4126140 4127087 - alpha/beta hydrolase fold protein PFAM: alpha/beta hydrolase fold~KEGG: predicted protein gene gene3599 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3552 Amir_3553 Amir_3553 Amir_3553 4127299 4129158 + glycosyl transferase family 2 PFAM: glycosyl transferase family 2~KEGG: rru:Rru_A2348 glycosyl transferase gene gene3600 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3553 Amir_3554 Amir_3554 Amir_3554 4129182 4130693 + AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: eba:ebA2757 benzoate-CoA ligase gene gene3601 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3554 Amir_3555 Amir_3555 Amir_3555 4130785 4131129 + hypothetical protein gene gene3602 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3555 Amir_3556 Amir_3556 Amir_3556 4131145 4131780 - hypothetical protein gene gene3603 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3556 Amir_3557 Amir_3557 Amir_3557 4131830 4132297 - hypothetical protein gene gene3604 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3557 Amir_3558 Amir_3558 Amir_3558 4132426 4132929 + RNA polymerase%2C sigma-24 subunit%2C ECF subfamily TIGRFAM: RNA polymerase sigma-70 factor%2C sigma-E family%3B RNA polymerase sigma factor%2C sigma-70 family~PFAM: Sigma-70 region 4 type 2%3B sigma-70 region 2 domain protein%3B sigma-70 region 4 domain protein~KEGG: xau:Xaut_0976 ECF subfamily RNA polymerase sigma-24 factor gene gene3605 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3558 Amir_3559 Amir_3559 Amir_3559 4132926 4133984 + cell envelope-related transcriptional attenuator TIGRFAM: cell envelope-related function transcriptional attenuator%2C LytR/CpsA family~PFAM: cell envelope-related transcriptional attenuator~KEGG: bha:BH3670 attenuator for lytABC and LytR expression gene gene3606 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3559 Amir_3560 Amir_3560 Amir_3560 4133988 4134236 - pseudogene gene3607 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3560 Amir_3561 Amir_3561 Amir_3561 4134452 4135474 + Luciferase-like monooxygenase PFAM: Luciferase-like monooxygenase~KEGG: alkanal monooxygenase (bacterial liciferase alpha chain) like protein gene gene3608 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3561 Amir_3562 Amir_3562 Amir_3562 4135526 4136509 - Bile acid:sodium symporter PFAM: Bile acid:sodium symporter~KEGG: gox:GOX0688 putative efflux protein gene gene3609 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3562 Amir_3563 Amir_3563 Amir_3563 4136642 4137565 + aminoglycoside phosphotransferase PFAM: aminoglycoside phosphotransferase~KEGG: smt:Smal_1721 aminoglycoside phosphotransferase gene gene3610 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3563 Amir_3564 Amir_3564 Amir_3564 4137794 4140976 + peptidase S8 and S53 subtilisin kexin sedolisin PFAM: peptidase S8 and S53 subtilisin kexin sedolisin~KEGG: shn:Shewana3_1740 peptidase S8 and S53%2C subtilisin%2C kexin%2C sedolisin gene gene3611 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3564 Amir_3565 Amir_3565 Amir_3565 4141041 4141610 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: scl:sce9124 TetR family transcriptional regulator gene gene3612 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3565 Amir_3566 Amir_3566 Amir_3566 4141708 4142667 + aldo/keto reductase PFAM: aldo/keto reductase~KEGG: hne:HNE_2225 aldo/keto reductase family oxidoreductase gene gene3613 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3566 Amir_3567 Amir_3567 Amir_3567 4142749 4143657 + Alpha/beta hydrolase fold-3 domain protein PFAM: Alpha/beta hydrolase fold-3 domain protein~KEGG: bur:Bcep18194_B0145 esterase/lipase/thioesterase gene gene3614 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3567 Amir_3568 Amir_3568 Amir_3568 4143668 4144876 - GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: scl:sce0310 acetyltransferase gene gene3615 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3568 Amir_3569 Amir_3569 Amir_3569 4145071 4146525 + glycoside hydrolase family 43 PFAM: glycoside hydrolase family 43%3B Glycosyl hydrolase family 32 domain protein~KEGG: pzu:PHZ_c2480 xylosidase/arabinosidase gene gene3616 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3569 Amir_3570 Amir_3570 Amir_3570 4146737 4147120 - hypothetical protein gene gene3617 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3570 Amir_3571 Amir_3571 Amir_3571 4147372 4150236 + transcriptional regulator%2C SARP family PFAM: transcriptional activator domain%3B Tetratricopeptide TPR_4%3B NB-ARC domain protein%3B transcriptional regulator domain protein~SMART: Tetratricopeptide domain protein~KEGG: scl:sce6858 hypothetical protein gene gene3618 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3571 Amir_3572 Amir_3572 Amir_3572 4150285 4150695 - hypothetical protein KEGG: hypothetical protein gene gene3619 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3572 Amir_3573 Amir_3573 Amir_3573 4150843 4151412 - transcriptional regulator%2C LuxR family PFAM: regulatory protein LuxR~SMART: regulatory protein LuxR~KEGG: afw:Anae109_0915 two component LuxR family transcriptional regulator gene gene3620 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3573 Amir_3574 Amir_3574 Amir_3574 4151424 4152044 - transcriptional regulator%2C LuxR family PFAM: regulatory protein LuxR~SMART: regulatory protein LuxR~KEGG: ank:AnaeK_0902 two component transcriptional regulator%2C LuxR family gene gene3621 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3574 Amir_3575 Amir_3575 Amir_3575 4152347 4153597 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: gbm:Gbem_1224 major facilitator superfamily MFS_1 gene gene3622 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3575 Amir_3576 Amir_3576 Amir_3576 4153726 4155045 - cytochrome P450 PFAM: cytochrome P450~KEGG: scl:sce0675 cytochrome P450 CYP267A1 gene gene3623 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3576 Amir_3577 Amir_3577 Amir_3577 4155042 4162280 - amino acid adenylation domain protein TIGRFAM: amino acid adenylation domain protein~PFAM: AMP-dependent synthetase and ligase%3B Thioesterase%3B phosphopantetheine-binding%3B condensation domain protein~KEGG: mxa:MXAN_3618 non-ribosomal peptide synthetase gene gene3624 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3577 Amir_3578 Amir_3578 Amir_3578 4162304 4168600 - amino acid adenylation domain protein TIGRFAM: amino acid adenylation domain protein~PFAM: AMP-dependent synthetase and ligase%3B phosphopantetheine-binding%3B condensation domain protein~KEGG: mxa:MXAN_3636 non-ribosomal peptide synthetase gene gene3625 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3578 Amir_3579 Amir_3579 Amir_3579 4168784 4168987 + MbtH domain protein PFAM: MbtH domain protein~KEGG: scl:sce3255 hypothetical protein gene gene3626 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3579 Amir_3580 Amir_3580 Amir_3580 4169016 4171337 + Lantibiotic dehydratase domain protein PFAM: Lantibiotic dehydratase domain protein~KEGG: scl:sce2385 hypothetical protein gene gene3627 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3580 Amir_3581 Amir_3581 Amir_3581 4171337 4172803 + amino acid adenylation domain protein TIGRFAM: amino acid adenylation domain protein~PFAM: AMP-dependent synthetase and ligase~KEGG: bbt:BBta_1089 putative non-ribosomal peptide synthase gene gene3628 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3581 Amir_3582 Amir_3582 Amir_3582 4172800 4174209 + Pyridoxal-5'-phosphate-dependent protein beta subunit PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit~KEGG: aav:Aave_3217 pyridoxal-5'-phosphate- dependent enzyme%2C beta subunit gene gene3629 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3582 Amir_3583 Amir_3583 Amir_3583 4174206 4174457 + pseudogene gene3630 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3583 Amir_3584 Amir_3584 Amir_3584 4174459 4176744 + Lantibiotic dehydratase domain protein PFAM: Lantibiotic dehydratase domain protein~KEGG: scl:sce2385 hypothetical protein gene gene3631 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3584 Amir_3585 Amir_3585 Amir_3585 4176860 4177807 + ornithine cyclodeaminase/mu-crystallin PFAM: ornithine cyclodeaminase/mu-crystallin~KEGG: Ornithine cyclodeaminase gene gene3632 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3585 Amir_3586 Amir_3586 Amir_3586 4177869 4178378 + hypothetical protein gene gene3633 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3586 Amir_3587 Amir_3587 Amir_3587 4178482 4178610 + hypothetical protein gene gene3634 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3587 Amir_3588 Amir_3588 Amir_3588 4178673 4179194 + hypothetical protein KEGG: mxa:MXAN_2219 hypothetical protein gene gene3635 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3588 Amir_3589 Amir_3589 Amir_3589 4179449 4180147 + cobalamin biosynthesis protein CbiM TIGRFAM: cobalamin biosynthesis protein CbiM~PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein~KEGG: glo:Glov_3660 cobalamin biosynthesis protein CbiM gene gene3636 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3589 Amir_3590 Amir_3590 Amir_3590 4180140 4180496 + Cobalt transport protein CbiN PFAM: Cobalt transport protein CbiN~KEGG: kpn:KPN_03187 cobalt transport protein CbiN gene gene3637 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3590 Amir_3591 Amir_3591 Amir_3591 4180498 4181265 + cobalt ABC transporter%2C inner membrane subunit CbiQ TIGRFAM: cobalt ABC transporter%2C inner membrane subunit CbiQ~PFAM: cobalt transport protein~KEGG: mag:amb0277 ABC-type cobalt transport system gene gene3638 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3591 Amir_3592 Amir_3592 Amir_3592 4181262 4182077 + cobalt ABC transporter%2C ATPase subunit KEGG: mag:amb0278 ABC-type cobalt transport system~TIGRFAM: cobalt ABC transporter%2C ATPase subunit~PFAM: ABC transporter related~SMART: AAA ATPase gene gene3639 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3592 Amir_3593 Amir_3593 Amir_3593 4182111 4182653 - conserved hypothetical protein KEGG: bbt:BBta_2404 hypothetical protein gene gene3640 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3593 Amir_3594 Amir_3594 Amir_3594 4182747 4183583 - transcriptional regulator%2C MerR family PFAM: regulatory protein MerR~SMART: regulatory protein MerR~KEGG: azc:AZC_1457 transcriptional regulator gene gene3641 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3594 Amir_3595 Amir_3595 Amir_3595 4183752 4185341 + putative transcriptional regulator%2C PucR family KEGG: bha:BH1072 hypothetical protein gene gene3642 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3595 Amir_3596 Amir_3596 Amir_3596 4185503 4186777 + FAD dependent oxidoreductase PFAM: FAD dependent oxidoreductase~KEGG: xca:xccb100_1581 D-amino-acid dehydrogenase gene gene3643 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3596 Amir_3597 Amir_3597 Amir_3597 4186874 4187341 + GreA/GreB family elongation factor PFAM: transcription elongation factor GreA/GreB domain protein gene gene3644 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3597 Amir_3598 Amir_3598 Amir_3598 4187453 4187641 - hypothetical protein gene gene3645 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3598 Amir_3599 Amir_3599 Amir_3599 4187625 4188377 - Activator of Hsp90 ATPase 1 family protein PFAM: Activator of Hsp90 ATPase 1 family protein~KEGG: scl:sce2341 hypothetical protein gene gene3646 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3599 Amir_3600 Amir_3600 Amir_3600 4188414 4189622 - cytochrome P450 PFAM: cytochrome P450~KEGG: scl:sce0675 cytochrome P450 CYP267A1 gene gene3647 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3600 Amir_3601 Amir_3601 Amir_3601 4189619 4189840 - MbtH domain protein PFAM: MbtH domain protein~KEGG: bcy:Bcer98_1759 MbtH domain-containing protein gene gene3648 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3601 Amir_3602 Amir_3602 Amir_3602 4189882 4214517 - cyclic nucleotide-binding protein TIGRFAM: amino acid adenylation domain protein~PFAM: AMP-dependent synthetase and ligase%3B Methyltransferase type 11%3B Methyltransferase type 12%3B Thioesterase%3B phosphopantetheine-binding%3B condensation domain protein~KEGG: smd:Smed_6472 amino acid adenylation domain gene gene3649 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3602 Amir_3603 Amir_3603 Amir_3603 4214919 4217807 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: neu:NE0720 ABC transporter permease/ATP- binding protein gene gene3650 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3603 Amir_3604 Amir_3604 Amir_3604 4217877 4218215 - conserved hypothetical protein KEGG: nmu:Nmul_A0032 hypothetical protein gene gene3651 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3604 Amir_3605 Amir_3605 Amir_3605 4218854 4219345 + hypothetical protein KEGG: mex:Mext_0734 hypothetical protein gene gene3652 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3605 Amir_3606 Amir_3606 Amir_3606 4219418 4220605 - protein serine/threonine phosphatase PFAM: Stage II sporulation E family protein~SMART: protein phosphatase 2C domain protein~KEGG: sfu:Sfum_2453 serine phosphatase gene gene3653 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3606 Amir_3607 Amir_3607 Amir_3607 4220767 4221246 + hypothetical protein gene gene3654 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3607 Amir_3608 Amir_3608 Amir_3608 4221253 4222173 - NAD-dependent epimerase/dehydratase PFAM: NAD-dependent epimerase/dehydratase~KEGG: ade:Adeh_0027 NAD-dependent epimerase/dehydratase gene gene3655 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3608 Amir_3609 Amir_3609 Amir_3609 4222273 4222959 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: mes:Meso_0701 transcriptional regulator%2C TetR family gene gene3656 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3609 Amir_3610 Amir_3610 Amir_3610 4223112 4225286 + extracellular solute-binding protein family 1 PFAM: extracellular solute-binding protein family 1~KEGG: thuE%3B trehalosemaltose ABC transporter gene gene3657 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3610 Amir_3611 Amir_3611 Amir_3611 4225342 4227852 - protein of unknown function DUF214 PFAM: protein of unknown function DUF214~KEGG: hha:Hhal_1416 protein of unknown function DUF214 gene gene3658 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3611 Amir_3612 Amir_3612 Amir_3612 4227852 4228547 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: shl:Shal_1616 lipoprotein releasing system%2C ATP-binding protein gene gene3659 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3612 Amir_3613 Amir_3613 Amir_3613 4228544 4230241 - glucose-methanol-choline oxidoreductase PFAM: glucose-methanol-choline oxidoreductase%3B FAD dependent oxidoreductase~KEGG: mxa:MXAN_5165 GMC oxidoreductase family protein gene gene3660 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3613 Amir_3614 Amir_3614 Amir_3614 4230238 4230708 - cyclase/dehydrase PFAM: cyclase/dehydrase~KEGG: psp:PSPPH_4312 hypothetical protein gene gene3661 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3614 Amir_3615 Amir_3615 Amir_3615 4230722 4232002 - aminotransferase class-III PFAM: aminotransferase class-III~KEGG: esa:ESA_03492 putrescine--2-oxoglutarate aminotransferase gene gene3662 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3615 Amir_3616 Amir_3616 Amir_3616 4232161 4233291 - isobutylamine N-hydroxylase KEGG: bph:Bphy_6313 isobutylamine N-hydroxylase gene gene3663 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3616 Amir_3617 Amir_3617 Amir_3617 4233288 4234934 - aldehyde dehydrogenase PFAM: Aldehyde Dehydrogenase~KEGG: pca:Pcar_1701 aldehyde dehydrogenase%2C NAD- linked gene gene3664 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3617 Amir_3618 Amir_3618 Amir_3618 4234968 4235915 - conserved hypothetical protein KEGG: plu:plu4388 hypothetical protein gene gene3665 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3618 Amir_3619 Amir_3619 Amir_3619 4235952 4236938 - protein of unknown function DUF470 PFAM: protein of unknown function DUF470%3B protein of unknown function DUF472%3B protein of unknown function DUF471~KEGG: bph:Bphy_6311 hypothetical protein gene gene3666 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3619 Amir_3620 Amir_3620 Amir_3620 4236935 4237429 - integral membrane protein KEGG: bph:Bphy_6310 integral membrane protein gene gene3667 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3620 Amir_3621 Amir_3621 Amir_3621 4237596 4239299 - conserved hypothetical protein KEGG: kpe:KPK_3424 hypothetical protein gene gene3668 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3621 Amir_3622 Amir_3622 Amir_3622 4239296 4240201 - alpha/beta hydrolase fold protein PFAM: alpha/beta hydrolase fold~KEGG: hch:HCH_00758 alpha/beta hydrolase gene gene3669 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3622 Amir_3623 Amir_3623 Amir_3623 4240640 4242430 + AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: acp:A2cp1_1619 AMP-dependent synthetase and ligase gene gene3670 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3623 Amir_3624 Amir_3624 Amir_3624 4242477 4243025 - hexapaptide repeat-containing transferase KEGG: bac:BamMC406_2852 hexapaptide repeat- containing transferase gene gene3671 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3624 Amir_3625 Amir_3625 Amir_3625 4243108 4244037 + transcriptional regulator%2C LysR family PFAM: regulatory protein LysR~KEGG: mxa:MXAN_5480 transcriptional regulator%2C LysR family gene gene3672 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3625 Amir_3626 Amir_3626 Amir_3626 4244077 4244553 + conserved hypothetical protein KEGG: nar:Saro_3714 hypothetical protein gene gene3673 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3626 Amir_3627 Amir_3627 Amir_3627 4244590 4244919 + hypothetical protein gene gene3674 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3627 Amir_3628 Amir_3628 Amir_3628 4244938 4245333 - hypothetical protein gene gene3675 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3628 Amir_3629 Amir_3629 Amir_3629 4245567 4246841 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: dac:Daci_3577 major facilitator transporter gene gene3676 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3629 Amir_3630 Amir_3630 Amir_3630 4246895 4247770 + Methyltransferase type 11 PFAM: Methyltransferase type 11%3B UbiE/COQ5 methyltransferase%3B Methyltransferase type 12~KEGG: mmr:Mmar10_1955 methyltransferase type 11 gene gene3677 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3630 Amir_3631 Amir_3631 Amir_3631 4247811 4248650 + hypothetical protein gene gene3678 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3631 Amir_3632 Amir_3632 Amir_3632 4248762 4249604 - hypothetical protein gene gene3679 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3632 Amir_3633 Amir_3633 Amir_3633 4249838 4250398 - pseudogene gene3680 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3633 Amir_3634 Amir_3634 Amir_3634 4250559 4251267 - pseudogene gene3681 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3634 Amir_3635 Amir_3635 Amir_3635 4251529 4252179 + hypothetical protein gene gene3682 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3635 Amir_3636 Amir_3636 Amir_3636 4252350 4252796 + hypothetical protein gene gene3683 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3636 Amir_3637 Amir_3637 Amir_3637 4252777 4254678 + hypothetical protein KEGG: bbr:BB2304 putative competence protein gene gene3684 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3637 Amir_3638 Amir_3638 Amir_3638 4254939 4255286 - hypothetical protein KEGG: gbm:Gbem_2481 hypothetical protein gene gene3685 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3638 Amir_3639 Amir_3639 Amir_3639 4255283 4256830 - hypothetical protein gene gene3686 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3639 Amir_3640 Amir_3640 Amir_3640 4256978 4257315 - pseudogene gene3687 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3640 Amir_3641 Amir_3641 Amir_3641 4257471 4257653 + hypothetical protein gene gene3688 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3641 Amir_3642 Amir_3642 Amir_3642 4257650 4257967 + transcription factor WhiB PFAM: transcription factor WhiB gene gene3689 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3642 Amir_3643 Amir_3643 Amir_3643 4257997 4258284 + hypothetical protein gene gene3690 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3643 Amir_3644 Amir_3644 Amir_3644 4258293 4258907 + pseudogene gene3691 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3644 Amir_3645 Amir_3645 Amir_3645 4258904 4260931 + cell divisionFtsK/SpoIIIE PFAM: cell divisionFtsK/SpoIIIE~KEGG: pha:PSHAb0091 cell divisionFtsK/SpoIIIE domain-containing protein gene gene3692 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3645 Amir_3646 Amir_3646 Amir_3646 4260993 4261898 - helix-turn-helix domain protein PFAM: helix-turn-helix domain protein~SMART: helix-turn-helix domain protein gene gene3693 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3646 Amir_3647 Amir_3647 Amir_3647 4261895 4262167 - hypothetical protein gene gene3694 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3647 Amir_3648 Amir_3648 Amir_3648 4262325 4263176 + transcriptional regulator%2C XRE family SMART: helix-turn-helix domain protein gene gene3695 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3648 Amir_3649 Amir_3649 Amir_3649 4263218 4263445 + protein of unknown function DUF397 PFAM: protein of unknown function DUF397 gene gene3696 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3649 Amir_3650 Amir_3650 Amir_3650 4263636 4265021 + hypothetical protein KEGG: ade:Adeh_3797 hypothetical protein gene gene3697 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3650 Amir_3651 Amir_3651 Amir_3651 4265024 4265683 - HAD-superfamily hydrolase%2C subfamily IA%2C variant 1 TIGRFAM: HAD-superfamily hydrolase%2C subfamily IA%2C variant 1~PFAM: Haloacid dehalogenase domain protein hydrolase~KEGG: hypothetical protein gene gene3698 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3651 Amir_3652 Amir_3652 Amir_3652 4266080 4266694 + hypothetical protein gene gene3699 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3652 Amir_3653 Amir_3653 Amir_3653 4266640 4267470 - Endonuclease/exonuclease/phosphatase PFAM: Endonuclease/exonuclease/phosphatase~KEGG: rru:Rru_A2021 endonuclease/exonuclease/phosphatase gene gene3700 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3653 Amir_3654 Amir_3654 Amir_3654 4267467 4268519 - aldo/keto reductase PFAM: aldo/keto reductase~KEGG: ecp:ECP_1719 oxidoreductase YdjG gene gene3701 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3654 Amir_3655 Amir_3655 Amir_3655 4268681 4270816 + Radical SAM domain protein PFAM: Radical SAM domain protein~KEGG: rpb:RPB_2074 radical SAM binding protein gene gene3702 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3655 Amir_3656 Amir_3656 Amir_3656 4270966 4271193 + hypothetical protein gene gene3703 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3656 Amir_3657 Amir_3657 Amir_3657 4271244 4271564 + hypothetical protein gene gene3704 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3657 Amir_3658 Amir_3658 Amir_3658 4271933 4272751 + hypothetical protein gene gene3705 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3658 Amir_3659 Amir_3659 Amir_3659 4272803 4273645 + transposase IS4 family protein PFAM: transposase IS4 family protein~KEGG: similar to F57G4.9 gene gene3706 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3659 Amir_3660 Amir_3660 Amir_3660 4274960 4275148 + pseudogene gene3707 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3660 Amir_3661 Amir_3661 Amir_3661 4275175 4276341 - glycosyl transferase group 1 PFAM: glycosyl transferase group 1~KEGG: sal:Sala_1921 glycosyl transferase%2C group 1 gene gene3708 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3661 Amir_3662 Amir_3662 Amir_3662 4276470 4277714 - cytochrome P450 PFAM: cytochrome P450~KEGG: bxe:Bxe_C0945 putative cytochrome P450 gene gene3709 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3662 Amir_3663 Amir_3663 Amir_3663 4277795 4278673 - GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: cak:Caul_3937 GCN5-related N- acetyltransferase gene gene3710 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3663 Amir_3664 Amir_3664 Amir_3664 4278732 4280087 - crotonyl-CoA reductase TIGRFAM: crotonyl-CoA reductase~PFAM: Alcohol dehydrogenase zinc-binding domain protein%3B Alcohol dehydrogenase GroES domain protein~KEGG: dds:Ddes_1332 crotonyl-CoA reductase gene gene3711 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3664 Amir_3665 Amir_3665 Amir_3665 4280158 4281126 - Peptide-aspartate beta-dioxygenase PFAM: Aspartyl/Asparaginyl beta-hydroxylase~KEGG: similar to aspartyl/asparaginyl beta- hydroxylase gene gene3712 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3665 Amir_3666 Amir_3666 Amir_3666 4281123 4281722 - Ankyrin PFAM: Ankyrin~SMART: Ankyrin~KEGG: Os03g0655500%3B hypothetical protein gene gene3713 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3666 Amir_3667 Amir_3667 Amir_3667 4281712 4283565 - ABC transporter related PFAM: ABC transporter related%3B ABC transporter transmembrane region~SMART: AAA ATPase~KEGG: pca:Pcar_1259 ATP-binding transport protein%3B multicopy suppressor of HtrB gene gene3714 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3667 Amir_3668 Amir_3668 Amir_3668 4283562 4284515 - Peptide-aspartate beta-dioxygenase PFAM: Aspartyl/Asparaginyl beta-hydroxylase~KEGG: hypothetical protein gene gene3715 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3668 Amir_3669 Amir_3669 Amir_3669 4284512 4285978 - cytidyltransferase-related domain protein TIGRFAM: cytidyltransferase-related domain protein~PFAM: PfkB domain protein%3B cytidylyltransferase~KEGG: nmu:Nmul_A1792 bifunctional ADP-heptose synthase gene gene3716 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3669 Amir_3670 Amir_3670 Amir_3670 4286007 4287632 - Carbamoyltransferase PFAM: Carbamoyltransferase~KEGG: bra:BRADO2235 putative carbamoyltransferase family protein gene gene3717 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3670 Amir_3671 Amir_3671 Amir_3671 4287629 4288771 - glycosyl transferase family 9 PFAM: glycosyl transferase family 9~KEGG: rso:RSc0565 ADP-heptose--lipopolysaccharide heptosyltransferase II protein gene gene3718 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3671 Amir_3672 Amir_3672 Amir_3672 4288803 4289390 - MbtH domain protein PFAM: MbtH domain protein~KEGG: bbt:BBta_1084 hypothetical protein gene gene3719 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3672 Amir_3673 Amir_3673 Amir_3673 4289471 4290478 - Taurine catabolism dioxygenase TauD/TfdA PFAM: Taurine catabolism dioxygenase TauD/TfdA~KEGG: pen:PSEEN3233 SyrP protein gene gene3720 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3673 Amir_3674 Amir_3674 Amir_3674 4290517 4293099 - AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase%3B nitroreductase%3B phosphopantetheine-binding~KEGG: pen:PSEEN2716 non-ribosomal peptide synthetase gene gene3721 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3674 Amir_3675 Amir_3675 Amir_3675 4293096 4300955 - amino acid adenylation domain protein TIGRFAM: amino acid adenylation domain protein~PFAM: AMP-dependent synthetase and ligase%3B phosphopantetheine-binding%3B Non-ribosomal peptide synthetase%3B condensation domain protein~KEGG: psb:Psyr_1792 amino acid adenylation gene gene3722 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3675 Amir_3676 Amir_3676 Amir_3676 4300948 4302864 - asparagine synthase (glutamine-hydrolyzing) KEGG: bbt:BBta_3705 asparagine synthase%2C glutamine- hydrolyzing~TIGRFAM: asparagine synthase (glutamine- hydrolyzing)~PFAM: asparagine synthase%3B glutamine amidotransferase class-II gene gene3723 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3676 Amir_3677 Amir_3677 Amir_3677 4302870 4304597 - Aspartyl/Asparaginyl beta-hydroxylase PFAM: Aspartyl/Asparaginyl beta-hydroxylase~KEGG: hypothetical protein gene gene3724 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3677 Amir_3678 Amir_3678 Amir_3678 4304594 4305583 - NAD-dependent epimerase/dehydratase PFAM: NAD-dependent epimerase/dehydratase%3B 3-beta hydroxysteroid dehydrogenase/isomerase%3B Male sterility domain~KEGG: aba:Acid345_0895 NAD-dependent epimerase/dehydratase gene gene3725 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3678 Amir_3679 Amir_3679 Amir_3679 4305580 4307388 - condensation domain protein PFAM: condensation domain protein%3B phosphopantetheine-binding~KEGG: peptide synthetase gene gene3726 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3679 Amir_3680 Amir_3680 Amir_3680 4307375 4315540 - amino acid adenylation domain protein TIGRFAM: amino acid adenylation domain protein~PFAM: AMP-dependent synthetase and ligase%3B phosphopantetheine-binding%3B condensation domain protein~KEGG: mxa:MXAN_4414 non-ribosomal peptide synthase gene gene3727 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3680 Amir_3681 Amir_3681 Amir_3681 4315537 4318965 - amino acid adenylation domain protein TIGRFAM: amino acid adenylation domain protein~PFAM: AMP-dependent synthetase and ligase%3B phosphopantetheine-binding%3B condensation domain protein~KEGG: eca:ECA1487 non-ribosomal peptide synthetase gene gene3728 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3681 Amir_3682 Amir_3682 Amir_3682 4318962 4323455 - KR domain protein PFAM: KR domain protein%3B Beta-ketoacyl synthase%3B Acyl transferase%3B short-chain dehydrogenase/reductase SDR%3B phosphopantetheine-binding~KEGG: mxa:MXAN_3631 polyketide synthase type I gene gene3729 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3682 Amir_3683 Amir_3683 Amir_3683 4323452 4326631 - amino acid adenylation domain protein TIGRFAM: amino acid adenylation domain protein~PFAM: AMP-dependent synthetase and ligase%3B phosphopantetheine-binding%3B condensation domain protein~KEGG: mxa:MXAN_3636 non-ribosomal peptide synthetase gene gene3730 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3683 Amir_3684 Amir_3684 Amir_3684 4326640 4332969 - amino acid adenylation domain protein TIGRFAM: amino acid adenylation domain protein~PFAM: AMP-dependent synthetase and ligase%3B phosphopantetheine-binding%3B condensation domain protein~KEGG: mxa:MXAN_4414 non-ribosomal peptide synthase gene gene3731 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3684 Amir_3685 Amir_3685 Amir_3685 4333280 4335754 - peptidase S45 penicillin amidase PFAM: peptidase S45 penicillin amidase~KEGG: mxa:MXAN_2906 penicillin acylase family protein gene gene3732 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3685 Amir_3686 Amir_3686 Amir_3686 4335932 4337947 - condensation domain protein PFAM: condensation domain protein~KEGG: reh:H16_B1685 non-ribosomal peptide synthetase gene gene3733 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3686 Amir_3687 Amir_3687 Amir_3687 4338052 4338342 - transcriptional regulator%2C HxlR family PFAM: helix-turn-helix HxlR type~KEGG: mlo:mlr2600 hypothetical protein gene gene3734 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3687 Amir_3688 Amir_3688 Amir_3688 4339903 4340572 - pseudogene gene3735 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3688 Amir_3689 Amir_3689 Amir_3689 4340739 4341683 - RemN protein KEGG: bmv:BMASAVP1_0867 RemN protein gene gene3736 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3689 Amir_3690 Amir_3690 Amir_3690 4342081 4342254 + hypothetical protein gene gene3737 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3690 Amir_3691 Amir_3691 Amir_3691 4342380 4342895 + pyridoxamine 5'-phosphate oxidase-related FMN- binding PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding gene gene3738 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3691 Amir_3692 Amir_3692 Amir_3692 4343043 4344236 + cytochrome P450 PFAM: cytochrome P450~KEGG: hypothetical protein gene gene3739 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3692 Amir_3693 Amir_3693 Amir_3693 4344233 4344430 + protein of unknown function DUF1271 PFAM: protein of unknown function DUF1271~KEGG: bha:BH1605 ferredoxin gene gene3740 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3693 Amir_3694 Amir_3694 Amir_3694 4344444 4344896 - conserved hypothetical protein KEGG: dsh:Dshi_1841 hypothetical protein gene gene3741 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3694 Amir_3695 Amir_3695 Amir_3695 4345073 4346884 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: bpa:BPP2159 ABC transporter%2C ATP-binding protein gene gene3742 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3695 Amir_3696 Amir_3696 Amir_3696 4346913 4347566 - two component transcriptional regulator%2C LuxR family PFAM: response regulator receiver%3B regulatory protein LuxR%3B Sigma-70 region 4 type 2~SMART: response regulator receiver%3B regulatory protein LuxR~KEGG: scl:sce5431 two-component system response regulator gene gene3743 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3696 Amir_3697 Amir_3697 Amir_3697 4347563 4348504 - histidine kinase PFAM: ATP-binding region ATPase domain protein%3B histidine kinase dimerization and phosphoacceptor region~KEGG: scl:sce5432 putative two-component system sensor kinase gene gene3744 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3697 Amir_3698 Amir_3698 Amir_3698 4348510 4349940 - beta-lactamase PFAM: beta-lactamase~KEGG: bat:BAS2400 penicillin-binding protein%2C putative gene gene3745 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3698 Amir_3699 Amir_3699 Amir_3699 4350093 4351208 + monooxygenase FAD-binding PFAM: monooxygenase FAD-binding~KEGG: gdj:Gdia_2837 monooxygenase FAD-binding gene gene3746 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3699 Amir_3700 Amir_3700 Amir_3700 4351254 4351814 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: acp:A2cp1_1650 regulatory protein TetR gene gene3747 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3700 Amir_3701 Amir_3701 Amir_3701 4351972 4352391 + conserved hypothetical protein KEGG: nar:Saro_3538 hypothetical protein gene gene3748 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3701 Amir_3702 Amir_3702 Amir_3702 4352474 4353997 - protein of unknown function DUF112 transmembrane PFAM: protein of unknown function DUF112 transmembrane~KEGG: smd:Smed_0363 protein of unknown function DUF112 transmembrane gene gene3749 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3702 Amir_3703 Amir_3703 Amir_3703 4353990 4354484 - conserved hypothetical protein KEGG: hypothetical protein gene gene3750 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3703 Amir_3704 Amir_3704 Amir_3704 4354481 4355467 - conserved hypothetical protein PFAM: conserved hypothetical protein~KEGG: azc:AZC_4334 hypothetical protein gene gene3751 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3704 Amir_3705 Amir_3705 Amir_3705 4355612 4357195 + signal transduction histidine kinase regulating citrate/malate metabolism PFAM: ATP-binding region ATPase domain protein~SMART: ATP-binding region ATPase domain protein~KEGG: sfu:Sfum_3991 signal transduction histidine kinase regulating citrate/malate metabolism gene gene3752 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3705 Amir_3706 Amir_3706 Amir_3706 4357198 4357878 + response regulator receiver and unknown domain protein PFAM: response regulator receiver~SMART: response regulator receiver~KEGG: vco:VC0395_A1209 response regulator gene gene3753 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3706 Amir_3707 Amir_3707 Amir_3707 4357920 4358309 - YCII-related protein PFAM: YCII-related~KEGG: scl:sce5148 hypothetical protein gene gene3754 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3707 Amir_3708 Amir_3708 Amir_3708 4358375 4359940 - alpha amylase catalytic region PFAM: alpha amylase catalytic region~SMART: alpha amylase catalytic sub domain~KEGG: rsq:Rsph17025_2978 alpha amylase%2C catalytic region gene gene3755 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3708 Amir_3709 Amir_3709 Amir_3709 4359937 4360914 - Luciferase-like monooxygenase PFAM: Luciferase-like monooxygenase~KEGG: mex:Mext_1273 putative dehydrogenase protein gene gene3756 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3709 Amir_3710 Amir_3710 Amir_3710 4360965 4361741 - AAA ATPase SMART: AAA ATPase~KEGG: rme:Rmet_4896 SMC protein-like protein gene gene3757 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3710 Amir_3711 Amir_3711 Amir_3711 4361845 4362468 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: tmz:Tmz1t_0804 transcriptional regulator%2C TetR family gene gene3758 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3711 Amir_3712 Amir_3712 Amir_3712 4362533 4363393 + Ketopantoate reductase ApbA/PanE domain protein PFAM: Ketopantoate reductase ApbA/PanE domain protein~KEGG: scl:sce9123 putative oxidoreductase gene gene3759 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3712 Amir_3713 Amir_3713 Amir_3713 4363499 4363975 - hypothetical protein KEGG: mno:Mnod_4965 hypothetical protein gene gene3760 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3713 Amir_3714 Amir_3714 Amir_3714 4363995 4364531 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: baa:BA_3806 bacterial regulatory proteins%2C TetR family gene gene3761 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3714 Amir_3715 Amir_3715 Amir_3715 4364612 4365190 - FxsA cytoplasmic membrane protein PFAM: FxsA cytoplasmic membrane protein~KEGG: mxa:MXAN_5566 FxsA-like protein gene gene3762 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3715 Amir_3716 Amir_3716 Amir_3716 4365277 4366656 + Lysine 2%2C3-aminomutase PFAM: Radical SAM domain protein~KEGG: mxa:MXAN_4699 putative L-lysine 2%2C3- aminomutase gene gene3763 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3716 Amir_3717 Amir_3717 Amir_3717 4366905 4367285 - hypothetical protein gene gene3764 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3717 Amir_3718 Amir_3718 Amir_3718 4367305 4368297 - Mg2 transporter protein CorA family protein PFAM: Mg2 transporter protein CorA family protein~KEGG: rle:pRL120701 putative transmembrane magnesium and cobalt transport protein gene gene3765 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3718 Amir_3719 Amir_3719 Amir_3719 4368359 4369042 + transcriptional regulator%2C Crp/Fnr family PFAM: cyclic nucleotide-binding~SMART: cyclic nucleotide-binding%3B regulatory protein Crp~KEGG: lch:Lcho_0755 Crp/FNR family transcriptional regulator gene gene3766 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3719 Amir_3720 Amir_3720 Amir_3720 4369177 4370028 + hypothetical protein gene gene3767 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3720 Amir_3721 Amir_3721 Amir_3721 4370025 4371839 + hypothetical protein KEGG: ade:Adeh_3311 TPR repeat-containing protein gene gene3768 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3721 Amir_3722 Amir_3722 Amir_3722 4371836 4372927 + hypothetical protein gene gene3769 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3722 Amir_3723 Amir_3723 Amir_3723 4372993 4373319 - hypothetical protein gene gene3770 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3723 Amir_3724 Amir_3724 Amir_3724 4373506 4375314 + cytochrome c oxidase%2C subunit I KEGG: bha:BH2614 cytochrome caa3 oxidase (subunit I)~TIGRFAM: cytochrome c oxidase%2C subunit I~PFAM: cytochrome c oxidase subunit I gene gene3771 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3724 Amir_3725 Amir_3725 Amir_3725 4375763 4376827 + putative acyl protein synthase/acyl-CoA reductase-like protein KEGG: dac:Daci_4530 putative acyl protein synthase/acyl-CoA reductase-like protein gene gene3772 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3725 Amir_3726 Amir_3726 Amir_3726 4376831 4378306 + acyl-CoA reductase PFAM: acyl-CoA reductase~KEGG: aav:Aave_4516 putative acyl-CoA reductase gene gene3773 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3726 Amir_3727 Amir_3727 Amir_3727 4378383 4380815 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: scl:sce6315 excinuclease ABC subunit A gene gene3774 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3727 Amir_3728 Amir_3728 Amir_3728 4380886 4382163 - Dicarboxylate carrier MatC domain protein PFAM: Dicarboxylate carrier MatC domain protein%3B Citrate transporter~KEGG: matC%3B dicarboxylate-carrier protein gene gene3775 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3728 Amir_3729 Amir_3729 Amir_3729 4382160 4383482 - SAF domain protein PFAM: SAF domain protein%3B homoserine dehydrogenase NAD-binding~KEGG: rru:Rru_A3141 homoserine dehydrogenase%2C NAD- binding gene gene3776 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3729 Amir_3730 Amir_3730 Amir_3730 4383621 4384874 + type III effector Hrp-dependent outers PFAM: type III effector Hrp-dependent outers~KEGG: pde:Pden_3383 type III effector Hrp-dependent outers gene gene3777 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3730 Amir_3731 Amir_3731 Amir_3731 4384871 4385533 + class II aldolase/adducin family protein PFAM: class II aldolase/adducin family protein~KEGG: hiq:CGSHiGG_08670 putative aldolase gene gene3778 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3731 Amir_3732 Amir_3732 Amir_3732 4385538 4386389 + transcriptional regulator%2C DeoR family PFAM: regulatory protein DeoR%3B Helix-turn-helix type 11 domain protein~SMART: regulatory protein DeoR~KEGG: psp:PSPPH_4844 DeoR family transcriptional regulator gene gene3779 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3732 Amir_3733 Amir_3733 Amir_3733 4386386 4387201 - Bifunctional DNA primase/polymerase PFAM: Bifunctional DNA primase/polymerase~KEGG: bbt:BBta_1244 putative phage / plasmid primase P4 gene gene3780 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3733 Amir_3734 Amir_3734 Amir_3734 4387521 4388162 - aminoglycoside phosphotransferase PFAM: aminoglycoside phosphotransferase~KEGG: mch:Mchl_5542 aminoglycoside phosphotransferase gene gene3781 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3734 Amir_3735 Amir_3735 Amir_3735 4388413 4389528 - sodium/calcium exchanger membrane region PFAM: sodium/calcium exchanger membrane region~KEGG: bph:Bphy_3245 sodium/calcium exchanger membrane region gene gene3782 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3735 Amir_3736 Amir_3736 Amir_3736 4389753 4392806 + putative PAS/PAC sensor protein KEGG: met:M446_3626 signal transduction histidine kinase~TIGRFAM: PAS sensor protein~PFAM: Stage II sporulation E family protein%3B GAF domain protein%3B PAS fold-3 domain protein%3B Sulfate transporter/antisigma-factor antagonist STAS%3B PAS fold-4 domain protein%3B PAS fold domain protein~SMART: protein phosphatase 2C domain protein%3B PAC repeat-containing protein%3B GAF domain protein%3B PAS domain containing protein gene gene3783 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3736 Amir_3737 Amir_3737 Amir_3737 4392993 4395221 + Tetratricopeptide TPR_2 repeat protein PFAM: Tetratricopeptide TPR_2 repeat protein%3B TPR repeat-containing protein%3B Tetratricopeptide TPR_4~SMART: Tetratricopeptide domain protein~KEGG: scl:sce3550 hypothetical protein gene gene3784 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3737 Amir_3738 Amir_3738 Amir_3738 4395246 4395611 - anti-sigma-factor antagonist TIGRFAM: anti-anti-sigma factor~PFAM: Sulfate transporter/antisigma-factor antagonist STAS~KEGG: mca:MCA1431 anti-anti-sigma factor family protein gene gene3785 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3738 Amir_3739 Amir_3739 Amir_3739 4395709 4397280 - response regulator receiver modulated serine phosphatase PFAM: Stage II sporulation E family protein%3B response regulator receiver~SMART: response regulator receiver%3B protein phosphatase 2C domain protein~KEGG: pfo:Pfl01_3138 multi-sensor hybrid histidine kinase gene gene3786 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3739 Amir_3740 Amir_3740 Amir_3740 4397277 4399127 - histidine kinase PFAM: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein~KEGG: afw:Anae109_0803 histidine kinase gene gene3787 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3740 Amir_3741 Amir_3741 Amir_3741 4399124 4400143 - putative anti-sigma regulatory factor%2C serine/threonine protein kinase PFAM: Stage II sporulation E family protein%3B ATP- binding region ATPase domain protein~SMART: protein phosphatase 2C domain protein~KEGG: mch:Mchl_3342 putative anti-sigma regulatory factor%2C serine/threonine protein kinase gene gene3788 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3741 Amir_3742 Amir_3742 Amir_3742 4400145 4400558 - putative anti-sigma regulatory factor%2C serine/threonine protein kinase PFAM: ATP-binding region ATPase domain protein~SMART: ATP-binding region ATPase domain protein~KEGG: xca:xccb100_3165 putative sigma-B negative effector gene gene3789 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3742 Amir_3743 Amir_3743 Amir_3743 4400555 4400932 - anti-sigma-factor antagonist PFAM: Sulfate transporter/antisigma-factor antagonist STAS~KEGG: dac:Daci_4410 anti-sigma-factor antagonist gene gene3790 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3743 Amir_3744 Amir_3744 Amir_3744 4400932 4401798 - anti-sigma-factor antagonist PFAM: Sulfate transporter/antisigma-factor antagonist STAS~KEGG: xac:XAC1269 positive regulator of sigma-B gene gene3791 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3744 Amir_3745 Amir_3745 Amir_3745 4402034 4402657 - conserved hypothetical protein KEGG: met:M446_0126 hypothetical protein gene gene3792 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3745 Amir_3746 Amir_3746 Amir_3746 4402828 4404501 - glucose-methanol-choline oxidoreductase PFAM: glucose-methanol-choline oxidoreductase%3B FAD dependent oxidoreductase%3B GMC oxidoreductase~KEGG: scl:sce0787 hypothetical protein gene gene3793 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3746 Amir_3747 Amir_3747 Amir_3747 4404561 4406015 - FAD dependent oxidoreductase PFAM: FAD dependent oxidoreductase~KEGG: bur:Bcep18194_B2514 lipolytic protein gene gene3794 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3747 Amir_3748 Amir_3748 Amir_3748 4406087 4407139 + transcriptional regulator%2C AraC family PFAM: helix-turn-helix- domain containing protein AraC type~SMART: helix-turn-helix- domain containing protein AraC type~KEGG: pag:PLES_32251 putative transcriptional regulator gene gene3795 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3748 Amir_3749 Amir_3749 Amir_3749 4407109 4407735 - hypothetical protein KEGG: afw:Anae109_3301 hypothetical protein gene gene3796 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3749 Amir_3750 Amir_3750 Amir_3750 4407930 4408889 + Arabinan endo-1%2C5-alpha-L-arabinosidase PFAM: glycoside hydrolase family 43~KEGG: hypothetical protein gene gene3797 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3750 Amir_3751 Amir_3751 Amir_3751 4409326 4411908 + hypothetical protein KEGG: mxa:MXAN_5281 hypothetical protein gene gene3800 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3751 Amir_3752 Amir_3752 Amir_3752 4412999 4413424 + RNA polymerase%2C sigma-24 subunit%2C ECF subfamily gene gene3801 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3752 Amir_3753 Amir_3753 Amir_3753 4413522 4414262 + hypothetical protein gene gene3802 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3753 Amir_3754 Amir_3754 Amir_3754 4414475 4416316 - ABC transporter transmembrane region PFAM: ABC transporter transmembrane region%3B ABC transporter related~SMART: AAA ATPase~KEGG: scl:sce5645 carbohydrate ABC transporter gene gene3803 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3754 Amir_3755 Amir_3755 Amir_3755 4417098 4417229 + hypothetical protein gene gene3804 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3755 Amir_3756 Amir_3756 Amir_3756 4417761 4419506 - ABC transporter related PFAM: ABC transporter related%3B ABC transporter transmembrane region~SMART: AAA ATPase~KEGG: scl:sce5644 carbohydrate ABC transporter gene gene3805 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3756 Amir_3757 Amir_3757 Amir_3757 4419578 4420198 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: gdj:Gdia_1592 regulatory protein TetR gene gene3806 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3757 Amir_3758 Amir_3758 Amir_3758 4420205 4421047 - hypothetical protein KEGG: bcz:BCZK2871 hypothetical protein gene gene3807 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3758 Amir_3759 Amir_3759 Amir_3759 4421144 4421770 - hypothetical protein gene gene3808 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3759 Amir_3760 Amir_3760 Amir_3760 4422121 4424450 - pseudogene gene3809 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3760 Amir_3761 Amir_3761 Amir_3761 4425066 4425890 + Hemerythrin HHE cation binding domain protein PFAM: Hemerythrin HHE cation binding domain protein~KEGG: dar:Daro_0364 ABC transporter gene gene3810 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3761 Amir_3762 Amir_3762 Amir_3762 4425940 4427070 - SpoOM family protein PFAM: SpoOM family protein~KEGG: vha:VIBHAR_02077 hypothetical protein gene gene3811 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3762 Amir_3763 Amir_3763 Amir_3763 4427265 4427663 + transcriptional regulator%2C MerR family PFAM: regulatory protein MerR~SMART: regulatory protein MerR~KEGG: esa:ESA_01491 hypothetical protein gene gene3812 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3763 Amir_3764 Amir_3764 Amir_3764 4427736 4428965 - DGQHR domain protein TIGRFAM: DGQHR domain protein~KEGG: spl:Spea_2305 hypothetical protein gene gene3813 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3764 Amir_3765 Amir_3765 Amir_3765 4429110 4429751 - hypothetical protein gene gene3814 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3765 Amir_3766 Amir_3766 Amir_3766 4429822 4431537 - serine/threonine protein kinase PFAM: Serine/threonine protein kinase-related%3B tyrosine protein kinase~SMART: serine/threonine protein kinase%3B tyrosine protein kinase~KEGG: afw:Anae109_0119 protein kinase gene gene3815 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3766 Amir_3767 Amir_3767 Amir_3767 4431792 4432877 + mycothiol-dependent formaldehyde dehydrogenase TIGRFAM: mycothiol-dependent formaldehyde dehydrogenase~PFAM: Alcohol dehydrogenase zinc-binding domain protein%3B Alcohol dehydrogenase GroES domain protein~KEGG: dac:Daci_0183 alcohol dehydrogenase gene gene3816 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3767 Amir_3768 Amir_3768 Amir_3768 4432874 4433503 + beta-lactamase domain protein PFAM: beta-lactamase domain protein~KEGG: glo:Glov_3342 beta-lactamase domain protein gene gene3817 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3768 Amir_3769 Amir_3769 Amir_3769 4433530 4434732 - Ricin B lectin PFAM: Ricin B lectin~SMART: Ricin B lectin~KEGG: sus:Acid_3087 TonB-dependent receptor gene gene3818 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3769 Amir_3770 Amir_3770 Amir_3770 4434884 4436146 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: dol:Dole_0353 major facilitator transporter gene gene3819 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3770 Amir_3771 Amir_3771 Amir_3771 4436143 4437537 + Pyridoxal-dependent decarboxylase PFAM: Pyridoxal-dependent decarboxylase%3B aminotransferase class V~KEGG: dal:Dalk_0154 pyridoxal-dependent decarboxylase gene gene3820 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3771 Amir_3772 Amir_3772 Amir_3772 4437608 4438915 + hypothetical protein KEGG: psb:Psyr_1929 hypothetical protein gene gene3821 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3772 Amir_3773 Amir_3773 Amir_3773 4438969 4440231 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: bpd:BURPS668_A2325 major facilitator superfamily permease gene gene3822 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3773 Amir_3774 Amir_3774 Amir_3774 4440361 4441194 + hypothetical protein gene gene3823 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3774 Amir_3775 Amir_3775 Amir_3775 4441205 4441531 + hypothetical protein gene gene3824 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3775 Amir_3776 Amir_3776 Amir_3776 4441528 4442028 + hypothetical protein gene gene3825 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3776 Amir_3777 Amir_3777 Amir_3777 4442021 4442545 + pseudogene gene3826 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3777 Amir_3778 Amir_3778 Amir_3778 4442542 4442988 + hypothetical protein gene gene3827 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3778 Amir_3779 Amir_3779 Amir_3779 4443040 4443453 - Glyoxalase/bleomycin resistance protein/dioxygenase PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase%3B 3-demethylubiquinone-9 3- methyltransferase~KEGG: xca:xccb100_3974 hypothetical protein gene gene3828 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3779 Amir_3780 Amir_3780 Amir_3780 4443559 4443681 + hypothetical protein gene gene3829 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3780 Amir_3781 Amir_3781 Amir_3781 4443794 4444210 - hypothetical protein KEGG: mgm:Mmc1_3605 MJ0042 family finger-like protein gene gene3830 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3781 Amir_3782 Amir_3782 Amir_3782 4444548 4444967 - hypothetical protein gene gene3831 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3782 Amir_3783 Amir_3783 Amir_3783 4445068 4445277 + hypothetical protein gene gene3832 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3783 Amir_3784 Amir_3784 Amir_3784 4445335 4445667 - pseudogene gene3833 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3784 Amir_3785 Amir_3785 Amir_3785 4445777 4446466 + hypothetical protein gene gene3834 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3785 Amir_3786 Amir_3786 Amir_3786 4446474 4447148 - FR47 domain protein PFAM: FR47 domain protein%3B GCN5-related N- acetyltransferase~KEGG: swi:Swit_4396 GCN5-related N- acetyltransferase gene gene3835 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3786 Amir_3787 Amir_3787 Amir_3787 4447288 4447614 + hypothetical protein gene gene3836 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3787 Amir_3788 Amir_3788 Amir_3788 4447658 4447924 - hypothetical protein gene gene3837 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3788 Amir_3789 Amir_3789 Amir_3789 4448254 4449111 - putative hydrolase KEGG: bbr:BB0423 putative hydrolase gene gene3838 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3789 Amir_3790 Amir_3790 Amir_3790 4449111 4449611 - hypothetical protein gene gene3839 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3790 Amir_3791 Amir_3791 Amir_3791 4449621 4449737 - hypothetical protein gene gene3840 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3791 Amir_3792 Amir_3792 Amir_3792 4450200 4451207 + hypothetical protein KEGG: impN%3B serine/threonine protein kinase%3B K08884 serine/threonine protein kinase%2C bacterial gene gene3841 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3792 Amir_3793 Amir_3793 Amir_3793 4451209 4452192 + conserved hypothetical protein KEGG: hypothetical protein gene gene3842 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3793 Amir_3794 Amir_3794 Amir_3794 4452176 4453609 + Adenylosuccinate synthase KEGG: rec:RHECIAT_CH0004205 putative adenylosuccinate synthase protein~PFAM: adenylosuccinate synthetase~SMART: adenylosuccinate synthetase gene gene3843 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3794 Amir_3795 Amir_3795 Amir_3795 4453680 4454366 + NUDIX hydrolase PFAM: NUDIX hydrolase~KEGG: aeh:Mlg_0745 NUDIX hydrolase gene gene3844 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3795 Amir_3796 Amir_3796 Amir_3796 4454686 4456479 + Ricin B lectin PFAM: Ricin B lectin%3B glycoside hydrolase clan GH- D~SMART: Ricin B lectin~KEGG: cak:Caul_2129 alpha-galactosidase gene gene3845 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3796 Amir_3797 Amir_3797 Amir_3797 4456583 4456993 + hypothetical protein KEGG: sde:Sde_1986 hypothetical protein gene gene3846 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3797 Amir_3798 Amir_3798 Amir_3798 4457237 4458805 - peptidase S8 and S53 subtilisin kexin sedolisin PFAM: peptidase S8 and S53 subtilisin kexin sedolisin%3B proteinase inhibitor I9 subtilisin propeptide~KEGG: mca:MCA0875 serine protease gene gene3847 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3798 Amir_3799 Amir_3799 Amir_3799 4459388 4459819 + transcriptional regulator%2C HxlR family PFAM: helix-turn-helix HxlR type~KEGG: bur:Bcep18194_A4724 HxlR family transcriptional regulator gene gene3848 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3799 Amir_3800 Amir_3800 Amir_3800 4460082 4461833 + Transketolase central region PFAM: Transketolase central region%3B Transketolase domain protein~KEGG: tgr:Tgr7_0832 1-deoxy-D-xylulose-5-phosphate synthase gene gene3849 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3800 Amir_3801 Amir_3801 Amir_3801 4461830 4462822 + hypothetical protein KEGG: scl:sce8552 putative terpene cyclase gene gene3850 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3801 Amir_3802 Amir_3802 Amir_3802 4462943 4463590 + hypothetical protein KEGG: hypothetical protein gene gene3851 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3802 Amir_3803 Amir_3803 Amir_3803 4463717 4463932 - pseudogene gene3852 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3803 Amir_3804 Amir_3804 Amir_3804 4464116 4464541 + transcriptional regulator%2C BadM/Rrf2 family TIGRFAM: transcriptional regulator%2C Rrf2 family~PFAM: protein of unknown function UPF0074~KEGG: cvi:CV_3487 hypothetical protein gene gene3853 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3804 Amir_3805 Amir_3805 Amir_3805 4464555 4465778 + oxidoreductase FAD/NAD(P)-binding domain protein PFAM: oxidoreductase FAD/NAD(P)-binding domain protein%3B globin%3B Oxidoreductase FAD-binding domain protein~KEGG: rso:RSc3398 flavohemoprotein (hemoglobin- like) transmembrane gene gene3854 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3805 Amir_3806 Amir_3806 Amir_3806 4465978 4466982 - transcriptional regulator%2C ArsR family PFAM: regulatory protein ArsR~SMART: regulatory protein ArsR~KEGG: aav:Aave_2096 transcriptional regulator%2C ArsR family gene gene3855 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3806 Amir_3807 Amir_3807 Amir_3807 4467254 4467676 - Roadblock/LC7 family protein PFAM: Roadblock/LC7 family protein~KEGG: sml:Smlt4270 hypothetical protein gene gene3856 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3807 Amir_3808 Amir_3808 Amir_3808 4467673 4468041 - conserved hypothetical protein KEGG: sml:Smlt4269 hypothetical protein gene gene3857 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3808 Amir_3809 Amir_3809 Amir_3809 4468230 4469708 - phytoene desaturase TIGRFAM: phytoene desaturase~PFAM: amine oxidase%3B FAD dependent oxidoreductase~KEGG: mxa:MXAN_0895 phytoene desaturase gene gene3858 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3809 Amir_3810 Amir_3810 Amir_3810 4469828 4470913 - Polyprenyl synthetase PFAM: Polyprenyl synthetase~KEGG: scl:sce4204 geranyltranstransferase gene gene3859 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3810 Amir_3811 Amir_3811 Amir_3811 4471084 4472016 + Squalene/phytoene synthase PFAM: Squalene/phytoene synthase~KEGG: PSY%3B PSY (PHYTOENE SYNTHASE)%3B geranylgeranyl- diphosphate geranylgeranyltransferase%3B K02291 phytoene synthase gene gene3860 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3811 Amir_3812 Amir_3812 Amir_3812 4472135 4473112 + Rieske (2Fe-2S) domain protein PFAM: Rieske [2Fe-2S] domain protein~KEGG: bur:Bcep18194_B0420 Rieske (2Fe-2S) protein gene gene3861 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3812 Amir_3813 Amir_3813 Amir_3813 4473221 4474792 - amine oxidase PFAM: amine oxidase%3B FAD dependent oxidoreductase~KEGG: hypothetical protein gene gene3862 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3813 Amir_3814 Amir_3814 Amir_3814 4474789 4475481 - Methyltransferase type 11 PFAM: Methyltransferase type 11%3B UbiE/COQ5 methyltransferase%3B Methyltransferase type 12~KEGG: mno:Mnod_7055 ubiquinone/menaquinone biosynthesis methyltransferase gene gene3863 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3814 Amir_3815 Amir_3815 Amir_3815 4475471 4475797 - lycopene cyclase domain protein TIGRFAM: lycopene cyclase domain protein gene gene3864 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3815 Amir_3816 Amir_3816 Amir_3816 4475794 4476141 - lycopene cyclase domain protein TIGRFAM: lycopene cyclase domain protein~KEGG: mxa:MXAN_0901 hypothetical protein gene gene3865 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3816 Amir_3817 Amir_3817 Amir_3817 4476417 4477088 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR%3B Tetracyclin repressor domain protein~KEGG: sme:SMc01715 hypothetical protein gene gene3866 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3817 Amir_3818 Amir_3818 Amir_3818 4477085 4478221 + monooxygenase FAD-binding PFAM: monooxygenase FAD-binding~KEGG: gdj:Gdia_2837 monooxygenase FAD-binding gene gene3867 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3818 Amir_3819 Amir_3819 Amir_3819 4478268 4479248 - aldo/keto reductase PFAM: aldo/keto reductase~KEGG: bur:Bcep18194_B1321 aldo/keto reductase gene gene3868 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3819 Amir_3820 Amir_3820 Amir_3820 4479361 4480224 - hypothetical protein KEGG: hypothetical protein gene gene3869 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3820 Amir_3821 Amir_3821 Amir_3821 4480366 4481229 - hypothetical protein KEGG: Calcium-binding protein gene gene3870 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3821 Amir_3822 Amir_3822 Amir_3822 4481725 4485456 - Cna B domain protein PFAM: Cna B domain protein~KEGG: gme:Gmet_2043 hypothetical protein gene gene3871 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3822 Amir_3823 Amir_3823 Amir_3823 4485690 4486862 + protein of unknown function UPF0118 PFAM: protein of unknown function UPF0118~KEGG: mxa:MXAN_7270 hypothetical protein gene gene3872 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3823 Amir_3824 Amir_3824 Amir_3824 4486974 4488068 - hypothetical protein gene gene3873 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3824 Amir_3825 Amir_3825 Amir_3825 4488564 4488929 - 5-carboxymethyl-2-hydroxymuconate isomerase PFAM: 5-carboxymethyl-2-hydroxymuconate isomerase~KEGG: bur:Bcep18194_B0126 5-carboxymethyl-2- hydroxymuconate isomerase gene gene3874 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3825 Amir_3826 Amir_3826 Amir_3826 4489057 4489482 - alkylhydroperoxidase like protein%2C AhpD family TIGRFAM: alkylhydroperoxidase like protein%2C AhpD family~PFAM: Carboxymuconolactone decarboxylase~KEGG: ajs:Ajs_3259 alkylhydroperoxidase gene gene3875 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3826 Amir_3827 Amir_3827 Amir_3827 4489479 4490966 - AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: hch:HCH_02847 peptide arylation protein gene gene3876 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3827 Amir_3828 Amir_3828 Amir_3828 4490963 4492471 - L-carnitine dehydratase/bile acid-inducible protein F PFAM: L-carnitine dehydratase/bile acid-inducible protein F~KEGG: nmu:Nmul_A0969 L-carnitine dehydratase/bile acid-inducible protein F gene gene3877 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3828 Amir_3829 Amir_3829 Amir_3829 4492468 4493262 - Methyltransferase type 11 PFAM: Methyltransferase type 11%3B Methyltransferase type 12~KEGG: scl:sce8893 hypothetical protein gene gene3878 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3829 Amir_3830 Amir_3830 Amir_3830 4493303 4494838 - AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: pla:Plav_1766 cyclohexanecarboxylate-CoA ligase gene gene3879 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3830 Amir_3831 Amir_3831 Amir_3831 4494850 4496166 - amine oxidase PFAM: amine oxidase%3B FAD dependent oxidoreductase~KEGG: cvi:CV_1653 protoporphyrinogen oxidase gene gene3880 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3831 Amir_3832 Amir_3832 Amir_3832 4496166 4497353 - UbiA prenyltransferase PFAM: UbiA prenyltransferase~KEGG: hha:Hhal_1173 1%2C4-dihydroxy-2-naphthoate octaprenyltransferase gene gene3881 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3832 Amir_3833 Amir_3833 Amir_3833 4497350 4497991 - Methyltransferase type 11 PFAM: Methyltransferase type 11%3B Methyltransferase type 12~KEGG: gur:Gura_3006 methyltransferase type 11 gene gene3882 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3833 Amir_3834 Amir_3834 Amir_3834 4498001 4499137 - DegT/DnrJ/EryC1/StrS aminotransferase PFAM: DegT/DnrJ/EryC1/StrS aminotransferase%3B aromatic amino acid beta-eliminating lyase/threonine aldolase~KEGG: DegT/DnrJ/EryC1/StrS aminotransferase gene gene3883 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3834 Amir_3835 Amir_3835 Amir_3835 4499134 4500354 - Glutamine--scyllo-inositol transaminase PFAM: DegT/DnrJ/EryC1/StrS aminotransferase%3B aromatic amino acid beta-eliminating lyase/threonine aldolase~KEGG: scl:sce7344 NDP-sugar aminotransferase gene gene3884 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3835 Amir_3836 Amir_3836 Amir_3836 4500540 4501556 + oxidoreductase domain protein PFAM: oxidoreductase domain protein~KEGG: xac:XAC0681 oxidoreductase gene gene3885 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3836 Amir_3837 Amir_3837 Amir_3837 4501546 4502418 + Xylose isomerase domain protein TIM barrel PFAM: Xylose isomerase domain protein TIM barrel~KEGG: sus:Acid_2233 xylose isomerase domain- containing protein gene gene3886 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3837 Amir_3838 Amir_3838 Amir_3838 4502415 4503653 + peptidase M20 PFAM: peptidase M20~KEGG: sus:Acid_2224 acetylornithine deacetylase gene gene3887 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3838 Amir_3839 Amir_3839 Amir_3839 4503650 4504738 + Malate/L-lactate dehydrogenase PFAM: Malate/L-lactate dehydrogenase~KEGG: bpt:Bpet2680 malate dehydrogenase gene gene3888 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3839 Amir_3840 Amir_3840 Amir_3840 4504939 4505904 + oxidoreductase domain protein PFAM: oxidoreductase domain protein~KEGG: met:M446_2288 oxidoreductase domain- containing protein gene gene3889 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3840 Amir_3841 Amir_3841 Amir_3841 4505904 4506392 + hypothetical protein gene gene3890 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3841 Amir_3842 Amir_3842 Amir_3842 4506593 4507129 - putative signal transduction protein with EFhand domain PFAM: Calcium-binding EF-hand-containing protein~SMART: Calcium-binding EF-hand-containing protein~KEGG: bbt:BBta_5331 calcium-binding domain- containing protein gene gene3891 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3842 Amir_3843 Amir_3843 Amir_3843 4507191 4508438 - nucleotide sugar dehydrogenase TIGRFAM: nucleotide sugar dehydrogenase~PFAM: UDP-glucose/GDP-mannose dehydrogenase%3B UDP- glucose/GDP-mannose dehydrogenase dimerisation%3B UDP- glucose/GDP-mannose dehydrogenase%3B 6-phosphogluconate dehydrogenase NAD-binding~KEGG: sus:Acid_4597 UDP-glucose 6-dehydrogenase gene gene3892 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3843 Amir_3844 Amir_3844 Amir_3844 4508479 4508793 - hypothetical protein gene gene3893 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3844 Amir_3845 Amir_3845 Amir_3845 4509194 4510117 - Alcohol dehydrogenase zinc-binding domain protein PFAM: Alcohol dehydrogenase zinc-binding domain protein%3B Alcohol dehydrogenase GroES domain protein~KEGG: mlo:mlr3236 oxidoreductase gene gene3894 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3845 Amir_3846 Amir_3846 Amir_3846 4510239 4510859 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: scl:sce6308 TetR family transcriptional regulator gene gene3895 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3846 Amir_3847 Amir_3847 Amir_3847 4510911 4511951 + Pyridoxal-5'-phosphate-dependent protein beta subunit PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit~KEGG: dsh:Dshi_2951 pyridoxal-5'-phosphate- dependent protein beta subunit gene gene3896 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3847 Amir_3848 Amir_3848 Amir_3848 4511982 4512608 - hypothetical protein KEGG: mrd:Mrad2831_3526 PRC-barrel domain- containing protein gene gene3897 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3848 Amir_3849 Amir_3849 Amir_3849 4512815 4516069 + alpha-1%2C2-mannosidase TIGRFAM: alpha-1%2C2-mannosidase~PFAM: glycosyl hydrolase 92~KEGG: cps:CPS_2650 alpha-1%2C2-mannosidase family protein gene gene3898 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3849 Amir_3850 Amir_3850 Amir_3850 4516133 4516372 - hypothetical protein gene gene3899 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3850 Amir_3851 Amir_3851 Amir_3851 4516628 4517446 + alpha/beta hydrolase fold protein PFAM: alpha/beta hydrolase fold~KEGG: rle:RL1000 putative hydrolase gene gene3900 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3851 Amir_3852 Amir_3852 Amir_3852 4517443 4518618 + putative PAS/PAC sensor protein KEGG: rle:RL0999 putative two-component regulator sensor histidine kinase protein~TIGRFAM: PAS sensor protein~PFAM: Stage II sporulation E family protein~SMART: protein phosphatase 2C domain protein gene gene3901 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3852 Amir_3853 Amir_3853 Amir_3853 4518615 4518953 + anti-sigma-factor antagonist TIGRFAM: anti-anti-sigma factor~PFAM: Sulfate transporter/antisigma-factor antagonist STAS~KEGG: mca:MCA1686 anti-sigma B factor antagonist gene gene3902 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3853 Amir_3854 Amir_3854 Amir_3854 4519202 4519720 + hypothetical protein KEGG: psb:Psyr_0893 hypothetical protein gene gene3903 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3854 Amir_3855 Amir_3855 Amir_3855 4519852 4520397 + ChrB domain-containing protein KEGG: nha:Nham_0965 ChrB domain-containing protein gene gene3904 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3855 Amir_3856 Amir_3856 Amir_3856 4520406 4521563 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: afw:Anae109_0137 major facilitator transporter gene gene3905 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3856 Amir_3857 Amir_3857 Amir_3857 4521705 4522241 + lipoprotein signal peptidase TIGRFAM: lipoprotein signal peptidase~PFAM: peptidase A8 signal peptidase II~KEGG: hne:HNE_1728 signal peptidase II gene gene3906 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3857 Amir_3858 Amir_3858 Amir_3858 4522255 4522710 - conserved hypothetical protein KEGG: rle:RL3033 hypothetical protein gene gene3907 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3858 Amir_3859 Amir_3859 Amir_3859 4522751 4523536 - transcriptional regulator%2C SARP family PFAM: transcriptional activator domain%3B transcriptional regulator domain protein~KEGG: afw:Anae109_1735 SARP family transcriptional regulator gene gene3908 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3859 Amir_3860 Amir_3860 Amir_3860 4523773 4523946 + hypothetical protein gene gene3909 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3860 Amir_3861 Amir_3861 Amir_3861 4524018 4526471 + Lantibiotic dehydratase domain protein PFAM: Lantibiotic dehydratase domain protein~KEGG: scl:sce9070 hypothetical protein gene gene3910 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3861 Amir_3862 Amir_3862 Amir_3862 4526468 4527556 + hypothetical protein gene gene3911 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3862 Amir_3863 Amir_3863 Amir_3863 4527553 4529112 + hypothetical protein KEGG: afw:Anae109_2123 heat repeat-containing PBS lyase gene gene3912 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3863 Amir_3864 Amir_3864 Amir_3864 4529109 4530809 + protein of unknown function DUF181 PFAM: protein of unknown function DUF181~KEGG: bca:BCE_1377 hypothetical protein gene gene3913 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3864 Amir_3865 Amir_3865 Amir_3865 4530818 4531948 + hypothetical protein gene gene3914 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3865 Amir_3866 Amir_3866 Amir_3866 4531948 4533504 + hypothetical protein KEGG: rsh:Rsph17029_3715 nitroreductase gene gene3915 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3866 Amir_3867 Amir_3867 Amir_3867 4533480 4534139 - putative transcriptional regulator%2C TetR family KEGG: rme:Rmet_5057 transcriptional regulator%2C TetR family gene gene3916 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3867 Amir_3868 Amir_3868 Amir_3868 4534228 4535076 + putative esterase KEGG: swi:Swit_4207 putative esterase gene gene3917 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3868 Amir_3869 Amir_3869 Amir_3869 4535465 4536478 - hypothetical protein KEGG: nar:Saro_1805 hypothetical protein gene gene3918 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3869 Amir_3870 Amir_3870 Amir_3870 4536619 4536849 - hypothetical protein gene gene3919 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3870 Amir_3871 Amir_3871 Amir_3871 4536951 4537634 - two component transcriptional regulator%2C winged helix family PFAM: response regulator receiver%3B transcriptional regulator domain protein~SMART: response regulator receiver~KEGG: bcb:BCB4264_A5589 DNA-binding response regulator YycF gene gene3920 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3871 Amir_3872 Amir_3872 Amir_3872 4537773 4538225 + conserved hypothetical protein KEGG: met:M446_2237 hypothetical protein gene gene3921 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3872 Amir_3873 Amir_3873 Amir_3873 4538643 4539962 - integrase family protein PFAM: integrase family protein~KEGG: afw:Anae109_4219 phage integrase family protein gene gene3923 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3873 Amir_3874 Amir_3874 Amir_3874 4540253 4540429 + pseudogene gene3924 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3874 Amir_3875 Amir_3875 Amir_3875 4540637 4542124 - hypothetical protein KEGG: afw:Anae109_2123 heat repeat-containing PBS lyase gene gene3925 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3875 Amir_3876 Amir_3876 Amir_3876 4542333 4542443 + hypothetical protein gene gene3926 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3876 Amir_3877 Amir_3877 Amir_3877 4542797 4543282 + hypothetical protein gene gene3927 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3877 Amir_3878 Amir_3878 Amir_3878 4543461 4547096 + protein of unknown function DUF312 PFAM: protein of unknown function DUF312~KEGG: hso:HS_1058 large adhesin gene gene3928 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3878 Amir_3879 Amir_3879 Amir_3879 4547854 4548399 - hypothetical protein gene gene3929 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3879 Amir_3880 Amir_3880 Amir_3880 4548399 4552574 - methyl-accepting chemotaxis sensory transducer PFAM: protein of unknown function DUF312~KEGG: hso:HS_1058 large adhesin gene gene3930 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3880 Amir_3881 Amir_3881 Amir_3881 4553146 4553432 + pseudogene gene3931 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3881 Amir_3882 Amir_3882 Amir_3882 4553487 4555022 + peptidase S1 and S6 chymotrypsin/Hap PFAM: peptidase S1 and S6 chymotrypsin/Hap~SMART: peptidase S1 and S6 chymotrypsin/Hap~KEGG: hypothetical protein gene gene3932 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3882 Amir_3883 Amir_3883 Amir_3883 4556416 4557636 + condensation domain protein PFAM: condensation domain protein~KEGG: bam:Bamb_1537 amino acid adenylation domain- containing protein gene gene3933 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3883 Amir_3884 Amir_3884 Amir_3884 4557750 4558028 - pseudogene gene3934 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3884 Amir_3885 Amir_3885 Amir_3885 4558282 4558644 + hypothetical protein KEGG: cak:Caul_1058 hypothetical protein gene gene3935 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3885 Amir_3886 Amir_3886 Amir_3886 4558725 4559069 + pseudogene gene3936 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3886 Amir_3887 Amir_3887 Amir_3887 4559023 4560003 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: ank:AnaeK_2445 short-chain dehydrogenase/reductase SDR gene gene3937 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3887 Amir_3888 Amir_3888 Amir_3888 4560100 4560663 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: scl:sce9124 TetR family transcriptional regulator gene gene3938 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3888 Amir_3889 Amir_3889 Amir_3889 4560641 4561154 - pseudogene gene3939 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3889 Amir_3890 Amir_3890 Amir_3890 4561320 4561814 + Peptidoglycan-binding domain 1 protein PFAM: Peptidoglycan-binding domain 1 protein~KEGG: hypothetical protein gene gene3940 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3890 Amir_3891 Amir_3891 Amir_3891 4562626 4566396 + amino acid adenylation domain protein TIGRFAM: amino acid adenylation domain protein~PFAM: AMP-dependent synthetase and ligase%3B Thioesterase%3B phosphopantetheine-binding%3B condensation domain protein~KEGG: pen:PSEEN2717 non-ribosomal peptide synthetase gene gene3941 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3891 Amir_3892 Amir_3892 Amir_3892 4566393 4574876 + amino acid adenylation domain protein TIGRFAM: amino acid adenylation domain protein~PFAM: AMP-dependent synthetase and ligase%3B Beta- ketoacyl synthase%3B short-chain dehydrogenase/reductase SDR%3B condensation domain protein%3B KR domain protein%3B Thioesterase%3B phosphopantetheine-binding~KEGG: pen:PSEEN2718 polyketide synthase (terminal component) gene gene3942 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3892 Amir_3893 Amir_3893 Amir_3893 4574899 4575771 + Taurine dioxygenase PFAM: Taurine catabolism dioxygenase TauD/TfdA~KEGG: pen:PSEEN2720 dioxygenase%2C TauD gene gene3943 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3893 Amir_3894 Amir_3894 Amir_3894 4575773 4576984 + cytochrome P450 PFAM: cytochrome P450~KEGG: scl:sce7167 hypothetical protein gene gene3944 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3894 Amir_3895 Amir_3895 Amir_3895 4576981 4577658 + hypothetical protein KEGG: mes:Meso_2739 UDP-glucose pyrophosphorylase gene gene3945 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3895 Amir_3896 Amir_3896 Amir_3896 4577661 4579112 + beta-lactamase PFAM: beta-lactamase~KEGG: xac:XAC0134 beta-lactamase gene gene3946 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3896 Amir_3897 Amir_3897 Amir_3897 4579109 4580302 + glycosyl transferase family 28 PFAM: glycosyl transferase family 28~KEGG: scl:sce8970 glycosyl transferase gene gene3947 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3897 Amir_3898 Amir_3898 Amir_3898 4580448 4580888 + hypothetical protein gene gene3948 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3898 Amir_3899 Amir_3899 Amir_3899 4580932 4581795 - NmrA family protein PFAM: NmrA family protein~KEGG: scl:sce1557 hypothetical protein gene gene3949 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3899 Amir_3900 Amir_3900 Amir_3900 4581892 4582767 + transcriptional regulator%2C LysR family PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: bma:BMAA0201 transcriptional regulator CatR gene gene3950 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3900 Amir_3901 Amir_3901 Amir_3901 4582820 4583005 - hypothetical protein gene gene3951 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3901 Amir_3902 Amir_3902 Amir_3902 4583361 4583861 - Cupin 2 conserved barrel domain protein PFAM: Cupin 2 conserved barrel domain protein~KEGG: hypothetical protein gene gene3952 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3902 Amir_3903 Amir_3903 Amir_3903 4583907 4584851 - Alcohol dehydrogenase GroES domain protein PFAM: Alcohol dehydrogenase GroES domain protein%3B Alcohol dehydrogenase zinc-binding domain protein~KEGG: rme:Rmet_4293 alcohol dehydrogenase%2C zinc- binding gene gene3953 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3903 Amir_3904 Amir_3904 Amir_3904 4585012 4585866 - transcriptional regulator%2C XRE family PFAM: helix-turn-helix domain protein~SMART: helix-turn-helix domain protein~KEGG: bcj:BCAM0680 putative DNA-binding protein gene gene3954 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3904 Amir_3905 Amir_3905 Amir_3905 4585944 4586396 - hypothetical protein gene gene3955 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3905 Amir_3906 Amir_3906 Amir_3906 4586393 4586659 - conserved hypothetical protein KEGG: hypothetical protein gene gene3956 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3906 Amir_3907 Amir_3907 Amir_3907 4587082 4587972 + Mannosyl-glycoproteinendo-beta-N-acetylglucosami nidase PFAM: glycoside hydrolase family 18~KEGG: hypothetical protein gene gene3957 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3907 Amir_3908 Amir_3908 Amir_3908 4588481 4589161 - pseudogene gene3958 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3908 Amir_3909 Amir_3909 Amir_3909 4589236 4589325 - pseudogene gene3959 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3909 Amir_3910 Amir_3910 Amir_3910 4589773 4590312 - pseudogene gene3960 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3910 Amir_3911 Amir_3911 Amir_3911 4590595 4591464 + transport system permease protein PFAM: transport system permease protein~KEGG: pmy:Pmen_4564 transport system permease protein gene gene3961 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3911 Amir_3912 Amir_3912 Amir_3912 4591490 4592509 + periplasmic binding protein PFAM: periplasmic binding protein~KEGG: pen:PSEEN3067 Fe uptake ABC transporter%2C periplasmic binding protein gene gene3962 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3912 Amir_3913 Amir_3913 Amir_3913 4592616 4593392 - Methyltransferase type 12 PFAM: Methyltransferase type 12%3B Methyltransferase type 11~KEGG: pau:PA14_39660 hypothetical protein gene gene3963 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3913 Amir_3914 Amir_3914 Amir_3914 4593389 4594213 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: pmy:Pmen_4566 ABC transporter related gene gene3964 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3914 Amir_3915 Amir_3915 Amir_3915 4594210 4595292 - transport system permease protein PFAM: transport system permease protein~KEGG: dac:Daci_3791 transport system permease protein gene gene3965 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3915 Amir_3916 Amir_3916 Amir_3916 4595289 4596419 - periplasmic binding protein PFAM: periplasmic binding protein~KEGG: bpm:BURPS1710b_3208 periplasmic binding protein gene gene3966 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3916 Amir_3917 Amir_3917 Amir_3917 4596416 4597690 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: dsh:Dshi_2354 major facilitator transporter gene gene3967 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3917 Amir_3918 Amir_3918 Amir_3918 4597687 4598985 - conserved hypothetical protein KEGG: bha:BH2073 hypothetical protein gene gene3968 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3918 Amir_3919 Amir_3919 Amir_3919 4599030 4599821 - conserved hypothetical protein KEGG: bha:BH2072 hypothetical protein gene gene3969 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3919 Amir_3920 Amir_3920 Amir_3920 4599882 4600694 - conserved hypothetical protein KEGG: bha:BH2071 hypothetical protein gene gene3970 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3920 Amir_3921 Amir_3921 Amir_3921 4600924 4601322 - hypothetical protein gene gene3971 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3921 Amir_3922 Amir_3922 Amir_3922 4601669 4602676 + conserved hypothetical protein KEGG: rso:RS03054 hypothetical protein gene gene3972 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3922 Amir_3923 Amir_3923 Amir_3923 4602815 4604995 + conserved hypothetical protein KEGG: bpy:Bphyt_0257 hypothetical protein gene gene3973 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3923 Amir_3924 Amir_3924 Amir_3924 4605007 4606827 + Carbamoyltransferase PFAM: Carbamoyltransferase~KEGG: bpy:Bphyt_0258 carbamoyltransferase gene gene3974 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3924 Amir_3925 Amir_3925 Amir_3925 4606839 4607018 + pseudogene gene3975 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3925 Amir_3926 Amir_3926 Amir_3926 4606993 4608054 - Alpha-N-arabinofuranosidase PFAM: glycoside hydrolase family 43~KEGG: cja:CJA_0819 alpha-L-arabinfuranosidase%2C putative%2C abf43M gene gene3976 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3926 Amir_3927 Amir_3927 Amir_3927 4608144 4609454 - Ricin B lectin PFAM: Ricin B lectin~SMART: Ricin B lectin~KEGG: sde:Sde_3710 arabinogalactan endo-1%2C4-beta- galactosidase gene gene3977 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3927 Amir_3928 Amir_3928 Amir_3928 4610083 4610604 + pseudogene gene3978 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3928 Amir_3929 Amir_3929 Amir_3929 4610870 4612102 + glycine cleavage T protein (aminomethyl transferase) PFAM: glycine cleavage T protein (aminomethyl transferase)~KEGG: mfa:Mfla_0439 aminomethyltransferase gene gene3979 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3929 Amir_3930 Amir_3930 Amir_3930 4612099 4613166 + FAD dependent oxidoreductase PFAM: FAD dependent oxidoreductase~KEGG: sus:Acid_5898 N-methyltryptophan oxidase gene gene3980 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3930 Amir_3931 Amir_3931 Amir_3931 4613163 4614155 + aldo/keto reductase PFAM: aldo/keto reductase~KEGG: gur:Gura_3526 aldo/keto reductase gene gene3981 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3931 Amir_3932 Amir_3932 Amir_3932 4614163 4614450 + hypothetical protein gene gene3982 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3932 Amir_3933 Amir_3933 Amir_3933 4614478 4616217 + Carbamoyltransferase PFAM: Carbamoyltransferase~KEGG: nha:Nham_2127 carbamoyltransferase gene gene3983 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3933 Amir_3934 Amir_3934 Amir_3934 4616214 4616993 + Methyltransferase type 11 PFAM: Methyltransferase type 11%3B Methyltransferase type 12~KEGG: tbd:Tbd_2162 hypothetical protein gene gene3984 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3934 Amir_3935 Amir_3935 Amir_3935 4616995 4618212 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: ppu:PP_3961 major facilitator transporter gene gene3985 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3935 Amir_3936 Amir_3936 Amir_3936 4618215 4619093 - pseudogene gene3986 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3936 Amir_3937 Amir_3937 Amir_3937 4619118 4619471 + pseudogene gene3987 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3937 Amir_3938 Amir_3938 Amir_3938 4619639 4620379 + hypothetical protein gene gene3988 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3938 Amir_3939 Amir_3939 Amir_3939 4620663 4621283 - bifunctional deaminase-reductase domain protein PFAM: bifunctional deaminase-reductase domain protein~KEGG: cvi:CV_3295 hypothetical protein gene gene3989 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3939 Amir_3940 Amir_3940 Amir_3940 4621283 4621861 - Activator of Hsp90 ATPase 1 family protein PFAM: Activator of Hsp90 ATPase 1 family protein~KEGG: afw:Anae109_0511 activator of HSP90 ATPase 1 family protein gene gene3990 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3940 Amir_3941 Amir_3941 Amir_3941 4621865 4622206 - transcriptional regulator%2C ArsR family PFAM: regulatory protein ArsR~SMART: regulatory protein ArsR~KEGG: afw:Anae109_0512 regulatory protein ArsR gene gene3991 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3941 Amir_3942 Amir_3942 Amir_3942 4622296 4622889 - transcriptional regulator%2C XRE family PFAM: helix-turn-helix domain protein~SMART: helix-turn-helix domain protein~KEGG: ent:Ent638_3529 XRE family transcriptional regulator gene gene3992 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3942 Amir_3943 Amir_3943 Amir_3943 4622991 4624229 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: smd:Smed_5551 hypothetical protein gene gene3993 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3943 Amir_3944 Amir_3944 Amir_3944 4624226 4625626 - Alpha-N-arabinofuranosidase KEGG: sde:Sde_0791 alpha-L-arabinofuranosidase~PFAM: glycoside hydrolase family 43%3B Ricin B lectin~SMART: Ricin B lectin gene gene3994 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3944 Amir_3945 Amir_3945 Amir_3945 4625812 4626699 + aldo/keto reductase PFAM: aldo/keto reductase~KEGG: mes:Meso_3900 aldo/keto reductase gene gene3995 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3945 Amir_3946 Amir_3946 Amir_3946 4626914 4627252 + anti-sigma-factor antagonist TIGRFAM: anti-anti-sigma factor~PFAM: Sulfate transporter/antisigma-factor antagonist STAS~KEGG: sus:Acid_5261 anti-sigma-factor antagonist gene gene3996 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3946 Amir_3947 Amir_3947 Amir_3947 4627327 4628079 - transcriptional regulator%2C LuxR family PFAM: regulatory protein LuxR%3B Sigma-70 region 4 type 2~SMART: regulatory protein LuxR~KEGG: acp:A2cp1_0906 transcriptional regulator%2C LuxR family gene gene3997 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3947 Amir_3948 Amir_3948 Amir_3948 4628751 4630325 - drug resistance transporter%2C EmrB/QacA subfamily TIGRFAM: drug resistance transporter%2C EmrB/QacA subfamily~PFAM: major facilitator superfamily MFS_1~KEGG: bph:Bphy_3357 EmrB/QacA family drug resistance transporter gene gene3998 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3948 Amir_3949 Amir_3949 Amir_3949 4630322 4630954 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: transcriptional regulator protein gene gene3999 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3949 Amir_3950 Amir_3950 Amir_3950 4631056 4631766 - hypothetical protein KEGG: acp:A2cp1_0909 translation initiation factor SUI1 gene gene4000 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3950 Amir_3951 Amir_3951 Amir_3951 4631763 4632101 - hypothetical protein gene gene4001 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3951 Amir_3952 Amir_3952 Amir_3952 4632114 4633286 - hypothetical protein KEGG: YALI0E33891p gene gene4002 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3952 Amir_3953 Amir_3953 Amir_3953 4633430 4633744 - anti-sigma-factor antagonist PFAM: Sulfate transporter/antisigma-factor antagonist STAS~KEGG: azc:AZC_4213 anti-sigma factor antagonist gene gene4003 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3953 Amir_3954 Amir_3954 Amir_3954 4633741 4637853 - multi-sensor signal transduction histidine kinase KEGG: cti:RALTA_B0128 putative multi-site sensor histidine kinase~TIGRFAM: PAS sensor protein~PFAM: Stage II sporulation E family protein%3B response regulator receiver%3B PAS fold domain protein%3B PAS fold-4 domain protein%3B ATP-binding region ATPase domain protein%3B histidine kinase A domain protein~SMART: response regulator receiver%3B protein phosphatase 2C domain protein%3B histidine kinase A domain protein%3B GAF domain protein%3B PAS domain containing protein%3B ATP-binding region ATPase domain protein gene gene4004 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3954 Amir_3955 Amir_3955 Amir_3955 4637943 4638350 - ATP-binding region ATPase domain protein PFAM: ATP-binding region ATPase domain protein gene gene4005 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3955 Amir_3956 Amir_3956 Amir_3956 4638618 4639436 + hypothetical protein KEGG: hypothetical protein%3B K03497 chromosome partitioning protein%2C ParB family gene gene4006 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3956 Amir_3957 Amir_3957 Amir_3957 4639751 4640620 + transcriptional regulator%2C Crp/Fnr family PFAM: cyclic nucleotide-binding~SMART: regulatory protein Crp%3B cyclic nucleotide- binding~KEGG: swi:Swit_2706 Crp/FNR family transcriptional regulator gene gene4007 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3957 Amir_3958 Amir_3958 Amir_3958 4640945 4642042 - Pectate lyase/Amb allergen PFAM: Pectate lyase/Amb allergen~SMART: Pectate lyase/Amb allergen~KEGG: sde:Sde_0943 ribosomal protein S5 gene gene4008 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3958 Amir_3959 Amir_3959 Amir_3959 4642382 4643653 - esterase%2C PHB depolymerase family KEGG: acetyl xylan esterase%3B K01567~TIGRFAM: esterase%2C PHB depolymerase family~PFAM: cellulose-binding family II~SMART: cellulose-binding family II gene gene4009 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3959 Amir_3960 Amir_3960 Amir_3960 4643730 4644617 - hypothetical protein KEGG: vvu:VV2_0700 beta-lactamase class A gene gene4010 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3960 Amir_3961 Amir_3961 Amir_3961 4644629 4645495 - transcriptional regulator%2C LysR family PFAM: regulatory protein LysR~KEGG: bmj:BMULJ_04428 LysR family transcriptional regulator gene gene4011 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3961 Amir_3962 Amir_3962 Amir_3962 4645608 4646555 + Beta-lactamase PFAM: beta-lactamase%3B penicillin-binding protein transpeptidase~KEGG: bsu:BSU18800 beta-lactamase precursor gene gene4012 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3962 Amir_3963 Amir_3963 Amir_3963 4646925 4647869 - transcriptional regulator%2C XRE family PFAM: helix-turn-helix domain protein~SMART: helix-turn-helix domain protein~KEGG: sml:Smlt2229 hypothetical protein gene gene4013 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3963 Amir_3964 Amir_3964 Amir_3964 4648428 4649474 + Alcohol dehydrogenase GroES domain protein PFAM: Alcohol dehydrogenase GroES domain protein%3B Alcohol dehydrogenase zinc-binding domain protein~KEGG: sme:SMc00680 putative zinc-type alcohol dehydrogenase protein gene gene4014 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3964 Amir_3965 Amir_3965 Amir_3965 4649567 4649803 + pseudogene gene4015 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3965 Amir_3966 Amir_3966 Amir_3966 4649883 4650263 + hypothetical protein gene gene4016 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3966 Amir_3967 Amir_3967 Amir_3967 4650450 4650869 - hypothetical protein KEGG: dac:Daci_4779 SPW repeat-containing protein gene gene4017 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3967 Amir_3968 Amir_3968 Amir_3968 4651137 4652510 + hypothetical protein KEGG: scl:sce6003 protein kinase gene gene4018 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3968 Amir_3969 Amir_3969 Amir_3969 4652552 4652980 - hypothetical protein gene gene4019 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3969 Amir_3970 Amir_3970 Amir_3970 4653078 4653572 - pseudogene gene4020 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3970 Amir_3971 Amir_3971 Amir_3971 4653718 4655205 - Pyrrolo-quinoline quinone PFAM: Pyrrolo-quinoline quinone~SMART: Pyrrolo-quinoline quinone~KEGG: rso:RSc1218 lipoprotein transmembrane gene gene4021 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3971 Amir_3972 Amir_3972 Amir_3972 4655564 4656814 + monooxygenase FAD-binding PFAM: monooxygenase FAD-binding~KEGG: pde:Pden_1503 hypothetical protein gene gene4022 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3972 Amir_3973 Amir_3973 Amir_3973 4656811 4658328 - extracellular solute-binding protein family 5 PFAM: extracellular solute-binding protein family 5~KEGG: ABC-type dipeptide transport system%2C periplasmic component%3B K02035 peptide/nickel transport system substrate-binding protein gene gene4023 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3973 Amir_3974 Amir_3974 Amir_3974 4658604 4659263 - SOS-response transcriptional repressor%2C LexA KEGG: bha:BH2356 LexA repressor~TIGRFAM: LexA repressor~PFAM: peptidase S24 and S26 domain protein%3B LexA DNA-binding domain protein gene gene4024 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3974 Amir_3975 Amir_3975 Amir_3975 4659383 4659994 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: bja:bll7174 transcriptional regulatory protein gene gene4025 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3975 Amir_3976 Amir_3976 Amir_3976 4660107 4660841 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B KR domain protein~KEGG: bpy:Bphyt_1098 short-chain dehydrogenase/reductase SDR gene gene4026 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3976 Amir_3977 Amir_3977 Amir_3977 4660957 4661259 + hypothetical protein KEGG: hypothetical protein gene gene4027 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3977 Amir_3978 Amir_3978 Amir_3978 4661377 4662579 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: mxa:MXAN_2233 major facilitator family transporter gene gene4028 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3978 Amir_3979 Amir_3979 Amir_3979 4662650 4663261 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: mrd:Mrad2831_1768 TetR family transcriptional regulator gene gene4029 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3979 Amir_3980 Amir_3980 Amir_3980 4663413 4664120 + GTP cyclohydrolase II PFAM: GTP cyclohydrolase II~KEGG: pfl:PFL_1034 GTP cyclohydrolase II gene gene4030 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3980 Amir_3981 Amir_3981 Amir_3981 4664117 4664719 + transcriptional regulator%2C MarR family PFAM: regulatory protein MarR~SMART: regulatory protein MarR~KEGG: oan:Oant_4026 transcriptional regulator%2C MarR family gene gene4031 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3981 Amir_3982 Amir_3982 Amir_3982 4664740 4665765 + riboflavin biosynthesis protein RibD TIGRFAM: riboflavin biosynthesis protein RibD~PFAM: bifunctional deaminase-reductase domain protein%3B CMP/dCMP deaminase zinc-binding~KEGG: xca:xccb100_3664 riboflavin biosynthesis protein RibD (diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-[5-phosphoribosylamino]uracil reductase) gene gene4032 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3982 Amir_3983 Amir_3983 Amir_3983 4665992 4667137 + peptidase dimerization domain protein PFAM: peptidase dimerization domain protein%3B peptidase M20~KEGG: aba:Acid345_0237 peptidase M20 gene gene4033 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3983 Amir_3984 Amir_3984 Amir_3984 4667269 4669086 + PBS lyase HEAT domain protein repeat-containing protein PFAM: PBS lyase HEAT domain protein repeat- containing protein%3B HEAT domain containing protein~SMART: PBS lyase HEAT domain protein repeat- containing protein~KEGG: afw:Anae109_2123 heat repeat-containing PBS lyase gene gene4034 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3984 Amir_3985 Amir_3985 Amir_3985 4669083 4669709 + hypothetical protein KEGG: hypothetical protein LOC100014234 gene gene4035 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3985 Amir_3986 Amir_3986 Amir_3986 4669702 4670595 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B KR domain protein~KEGG: xcv:XCV1204 oxidoreductase gene gene4036 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3986 Amir_3987 Amir_3987 Amir_3987 4670740 4671501 - glycoside hydrolase family 12 PFAM: glycoside hydrolase family 12~KEGG: hypothetical protein gene gene4037 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3987 Amir_3988 Amir_3988 Amir_3988 4671675 4672532 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: psb:Psyr_0904 short-chain dehydrogenase/reductase SDR gene gene4038 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3988 Amir_3989 Amir_3989 Amir_3989 4672872 4673924 + putative glutathione S-transferase KEGG: tgr:Tgr7_0702 putative glutathione S- transferase gene gene4039 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3989 Amir_3990 Amir_3990 Amir_3990 4673944 4674690 + transcriptional regulator%2C MerR family PFAM: regulatory protein MerR~SMART: regulatory protein MerR~KEGG: atc:AGR_pAT_269 hypothetical protein gene gene4040 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3990 Amir_3991 Amir_3991 Amir_3991 4674679 4676126 - pseudogene gene4041 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3991 Amir_3992 Amir_3992 Amir_3992 4676336 4677082 + NmrA family protein PFAM: NmrA family protein%3B dTDP-4-dehydrorhamnose reductase~KEGG: bpa:BPP3249 hypothetical protein gene gene4042 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3992 Amir_3993 Amir_3993 Amir_3993 4677058 4677591 - RDD domain containing protein PFAM: RDD domain containing protein~KEGG: mlo:mll8365 hypothetical protein gene gene4043 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3993 Amir_3994 Amir_3994 Amir_3994 4677708 4679381 + TAP domain protein PFAM: TAP domain protein%3B alpha/beta hydrolase fold~KEGG: bph:Bphy_7397 TAP domain-containing protein gene gene4044 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3994 Amir_3995 Amir_3995 Amir_3995 4679427 4679972 - hypothetical protein KEGG: rpb:RPB_1369 hypothetical protein gene gene4045 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3995 Amir_3996 Amir_3996 Amir_3996 4679977 4680414 - hypothetical protein KEGG: ank:AnaeK_1205 protein of unknown function DUF1028 gene gene4046 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3996 Amir_3997 Amir_3997 Amir_3997 4680580 4681461 + SEFIR domain protein PFAM: SEFIR domain protein~KEGG: gme:Gmet_1793 hypothetical protein gene gene4047 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3997 Amir_3998 Amir_3998 Amir_3998 4681533 4681718 + hypothetical protein gene gene4048 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3998 Amir_3999 Amir_3999 Amir_3999 4681806 4682201 + hypothetical protein KEGG: nwi:Nwi_1916 hypothetical protein gene gene4049 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_3999 Amir_4000 Amir_4000 Amir_4000 4682227 4683372 + histidine kinase PFAM: ATP-binding region ATPase domain protein%3B histidine kinase dimerization and phosphoacceptor region~SMART: ATP-binding region ATPase domain protein~KEGG: scl:sce5432 putative two-component system sensor kinase gene gene4050 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4000 Amir_4001 Amir_4001 Amir_4001 4683398 4684051 + two component transcriptional regulator%2C LuxR family PFAM: response regulator receiver%3B regulatory protein LuxR~SMART: response regulator receiver%3B regulatory protein LuxR~KEGG: scl:sce5431 two-component system response regulator gene gene4051 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4001 Amir_4002 Amir_4002 Amir_4002 4684166 4684633 + hypothetical protein gene gene4052 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4002 Amir_4003 Amir_4003 Amir_4003 4684882 4685634 + Oleoyl-(acyl-carrier-protein) hydrolase PFAM: Thioesterase~KEGG: pau:PA14_09230 pyochelin biosynthetic protein PchC gene gene4053 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4003 Amir_4004 Amir_4004 Amir_4004 4685708 4686625 - conserved hypothetical protein KEGG: hypothetical protein gene gene4054 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4004 Amir_4005 Amir_4005 Amir_4005 4686747 4687937 + monooxygenase FAD-binding PFAM: monooxygenase FAD-binding~KEGG: msl:Msil_0387 monooxygenase FAD-binding gene gene4055 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4005 Amir_4006 Amir_4006 Amir_4006 4687988 4688569 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: acp:A2cp1_2482 transcriptional regulator%2C TetR family gene gene4056 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4006 Amir_4007 Amir_4007 Amir_4007 4688647 4689456 - Xylose isomerase domain protein TIM barrel PFAM: Xylose isomerase domain protein TIM barrel~KEGG: smd:Smed_3334 xylose isomerase domain protein TIM barrel gene gene4057 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4007 Amir_4008 Amir_4008 Amir_4008 4689453 4690595 - conserved hypothetical protein KEGG: sme:SMc04132 hypothetical protein gene gene4058 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4008 Amir_4009 Amir_4009 Amir_4009 4690592 4691737 - oxidoreductase domain protein PFAM: oxidoreductase domain protein%3B Oxidoreductase domain~KEGG: atc:AGR_L_3386 hypothetical protein gene gene4059 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4009 Amir_4010 Amir_4010 Amir_4010 4691762 4692837 - pseudogene gene4060 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4010 Amir_4011 Amir_4011 Amir_4011 4693102 4693743 - superoxide dismutase copper/zinc binding PFAM: superoxide dismutase copper/zinc binding gene gene4061 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4011 Amir_4012 Amir_4012 Amir_4012 4693917 4695188 + heat domain containing protein KEGG: rlt:Rleg2_2895 heat domain containing protein gene gene4062 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4012 Amir_4013 Amir_4013 Amir_4013 4695762 4696562 + alpha/beta hydrolase fold protein PFAM: alpha/beta hydrolase fold~KEGG: pde:Pden_1042 alpha/beta hydrolase fold gene gene4063 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4013 Amir_4014 Amir_4014 Amir_4014 4696610 4697110 - putative two component transcriptional regulator%2C winged helix family PFAM: transcriptional regulator domain protein~KEGG: bcb:BCB4264_A1351 DNA-binding response regulator gene gene4064 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4014 Amir_4015 Amir_4015 Amir_4015 4697316 4698173 + Methylenetetrahydrofolate dehydrogenase (NADP(+)) PFAM: tetrahydrofolate dehydrogenase/cyclohydrolase~KEGG: sde:Sde_1920 methenyltetrahydrofolate cyclohydrolase gene gene4065 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4015 Amir_4016 Amir_4016 Amir_4016 4698370 4699722 - O-acetylhomoserine/O-acetylserine sulfhydrylase KEGG: sus:Acid_5487 O-acetylhomoserine/O- acetylserine sulfhydrylase~TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase~PFAM: Cys/Met metabolism pyridoxal-phosphate- dependent protein%3B DegT/DnrJ/EryC1/StrS aminotransferase%3B aromatic amino acid beta-eliminating lyase/threonine aldolase gene gene4066 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4016 Amir_4017 Amir_4017 Amir_4017 4699865 4700668 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: bbt:BBta_7223 short-chain dehydrogenase/reductase SDR gene gene4067 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4017 Amir_4018 Amir_4018 Amir_4018 4701286 4701927 - NAD-dependent epimerase/dehydratase KEGG: jan:Jann_0393 NAD-dependent epimerase/dehydratase gene gene4068 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4018 Amir_4019 Amir_4019 Amir_4019 4702898 4719478 + Acyl transferase PFAM: Acyl transferase%3B Beta-ketoacyl synthase%3B Alcohol dehydrogenase GroES domain protein%3B short-chain dehydrogenase/reductase SDR%3B KR domain protein%3B Alcohol dehydrogenase zinc-binding domain protein%3B phosphopantetheine-binding~KEGG: pst:PSPTO_4686 coronafacic acid polyketide synthase I gene gene4069 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4019 Amir_4020 Amir_4020 Amir_4020 4719491 4720342 - Luciferase-like monooxygenase PFAM: Luciferase-like monooxygenase~KEGG: oca:OCAR_4999 hypothetical protein gene gene4070 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4020 Amir_4021 Amir_4021 Amir_4021 4720433 4721644 - glycoside hydrolase family 3 domain protein PFAM: glycoside hydrolase family 3 domain protein~KEGG: dde:Dde_2559 beta-N-acetylhexosaminidase gene gene4071 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4021 Amir_4022 Amir_4022 Amir_4022 4722188 4724440 + hypothetical protein KEGG: acp:A2cp1_0462 exonuclease SbcC gene gene4072 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4022 Amir_4023 Amir_4023 Amir_4023 4724509 4725687 + hypothetical protein gene gene4073 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4023 Amir_4024 Amir_4024 Amir_4024 4725938 4726183 + hypothetical protein gene gene4074 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4024 Amir_4025 Amir_4025 Amir_4025 4726180 4726443 + hypothetical protein gene gene4075 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4025 Amir_4026 Amir_4026 Amir_4026 4726467 4726778 - hypothetical protein gene gene4076 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4026 Amir_4027 Amir_4027 Amir_4027 4726953 4727339 + hypothetical protein gene gene4077 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4027 Amir_4028 Amir_4028 Amir_4028 4727392 4728873 - serine/threonine protein kinase PFAM: Serine/threonine protein kinase-related%3B tyrosine protein kinase~SMART: serine/threonine protein kinase%3B tyrosine protein kinase~KEGG: sus:Acid_7020 WD-40 repeat-containing serine/threonin protein kinase gene gene4078 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4028 Amir_4029 Amir_4029 Amir_4029 4729017 4731491 - conserved hypothetical protein KEGG: rle:pRL90161 hypothetical protein gene gene4079 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4029 Amir_4030 Amir_4030 Amir_4030 4731947 4732843 + conserved hypothetical protein KEGG: bba:Bd3647 hypothetical protein gene gene4080 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4030 Amir_4031 Amir_4031 Amir_4031 4733014 4734609 - Glucan endo-1%2C3-beta-D-glucosidase KEGG: hypothetical protein~PFAM: Ricin B lectin~SMART: Ricin B lectin gene gene4081 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4031 Amir_4032 Amir_4032 Amir_4032 4734902 4736407 - AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: vei:Veis_4674 acyl-CoA synthetase gene gene4082 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4032 Amir_4033 Amir_4033 Amir_4033 4736646 4738229 + FAD-dependent pyridine nucleotide-disulphide oxidoreductase PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase%3B FAD dependent oxidoreductase~KEGG: RCJMB04_10a6%2C FOXRED2%3B FAD-dependent oxidoreductase domain containing 2 gene gene4083 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4033 Amir_4034 Amir_4034 Amir_4034 4738226 4739347 + FMN-dependent alpha-hydroxy acid dehydrogenase PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase~KEGG: scl:sce7671 (S)-2-hydroxy-acid oxidase gene gene4084 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4034 Amir_4035 Amir_4035 Amir_4035 4739344 4740780 + cytochrome P450-like protein KEGG: predicted protein gene gene4085 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4035 Amir_4036 Amir_4036 Amir_4036 4741043 4742311 + sodium/hydrogen exchanger PFAM: sodium/hydrogen exchanger~KEGG: pzu:PHZ_c2901 Kef-type K+ transport system%2C membrane component gene gene4086 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4036 Amir_4037 Amir_4037 Amir_4037 4742495 4742653 - pseudogene gene4087 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4037 Amir_4038 Amir_4038 Amir_4038 4742888 4744243 + histidine kinase PFAM: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B histidine kinase HAMP region domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase HAMP region domain protein%3B histidine kinase A domain protein~KEGG: histidine kinase gene gene4088 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4038 Amir_4039 Amir_4039 Amir_4039 4744828 4745112 + hypothetical protein KEGG: similar to mucin 2%3B K10955 intestinal mucin- 2 gene gene4089 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4039 Amir_4040 Amir_4040 Amir_4040 4745429 4745929 - conserved hypothetical protein KEGG: asa:ASA_3456 hypothetical protein gene gene4090 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4040 Amir_4041 Amir_4041 Amir_4041 4746067 4751058 - hypothetical protein KEGG: ade:Adeh_3797 hypothetical protein gene gene4091 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4041 Amir_4042 Amir_4042 Amir_4042 4751173 4752312 - Mandelate racemase/muconate lactonizing protein PFAM: Mandelate racemase/muconate lactonizing protein~KEGG: reu:Reut_B4643 mandelate racemase/muconate lactonizing protein gene gene4092 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4042 Amir_4043 Amir_4043 Amir_4043 4752441 4752812 + pseudogene gene4093 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4043 Amir_4044 Amir_4044 Amir_4044 4753130 4755073 + Na-Ca exchanger/integrin-beta4 PFAM: Na-Ca exchanger/integrin-beta4~SMART: Na-Ca exchanger/integrin-beta4~KEGG: hch:HCH_05909 hypothetical protein gene gene4094 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4044 Amir_4045 Amir_4045 Amir_4045 4755135 4756883 - ABC transporter related PFAM: ABC transporter related%3B ABC transporter transmembrane region~SMART: AAA ATPase~KEGG: rru:Rru_A2339 ABC transporter component gene gene4095 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4045 Amir_4046 Amir_4046 Amir_4046 4756880 4758670 - ABC transporter related PFAM: ABC transporter related%3B ABC transporter transmembrane region~SMART: AAA ATPase~KEGG: rru:Rru_A2340 ABC transporter%2C transmembrane region gene gene4096 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4046 Amir_4047 Amir_4047 Amir_4047 4758797 4759492 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: mlo:mlr7883 transcription regulator gene gene4097 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4047 Amir_4048 Amir_4048 Amir_4048 4759524 4762004 - protein of unknown function DUF214 PFAM: protein of unknown function DUF214~KEGG: afw:Anae109_1773 hypothetical protein gene gene4098 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4048 Amir_4049 Amir_4049 Amir_4049 4762001 4762753 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: aba:Acid345_0970 ABC transporter%2C ATPase subunit gene gene4099 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4049 Amir_4050 Amir_4050 Amir_4050 4762762 4763181 - hypothetical protein gene gene4100 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4050 Amir_4051 Amir_4051 Amir_4051 4763398 4764075 - two component transcriptional regulator%2C LuxR family PFAM: response regulator receiver%3B regulatory protein LuxR%3B Sigma-70 region 4 type 2%3B Bacterio-opsin activator HTH domain protein~SMART: response regulator receiver%3B regulatory protein LuxR~KEGG: scl:sce5431 two-component system response regulator gene gene4101 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4051 Amir_4052 Amir_4052 Amir_4052 4764199 4765356 - histidine kinase PFAM: histidine kinase dimerization and phosphoacceptor region%3B ATP-binding region ATPase domain protein~KEGG: mmr:Mmar10_2544 putative signal transduction histidine kinase gene gene4102 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4052 Amir_4053 Amir_4053 Amir_4053 4765573 4765962 + hypothetical protein KEGG: afw:Anae109_4407 hypothetical protein gene gene4103 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4053 Amir_4054 Amir_4054 Amir_4054 4765999 4766973 + Helix-turn-helix type 11 domain protein PFAM: Helix-turn-helix type 11 domain protein%3B protein of unknown function UPF0074~KEGG: afw:Anae109_3752 helix-turn-helix type 11 domain-containing protein gene gene4104 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4054 Amir_4055 Amir_4055 Amir_4055 4767068 4767517 + hypothetical protein KEGG: CG32198 gene gene4105 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4055 Amir_4056 Amir_4056 Amir_4056 4767474 4768103 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR%3B Tetracyclin repressor domain protein~KEGG: bph:Bphy_6164 TetR family transcriptional regulator gene gene4106 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4056 Amir_4057 Amir_4057 Amir_4057 4768554 4769117 + protein of unknown function DUF1486 PFAM: protein of unknown function DUF1486~KEGG: cak:Caul_1308 hypothetical protein gene gene4107 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4057 Amir_4058 Amir_4058 Amir_4058 4769121 4769897 + beta-lactamase domain protein PFAM: beta-lactamase domain protein~KEGG: bja:blr3078 hypothetical protein gene gene4108 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4058 Amir_4059 Amir_4059 Amir_4059 4770547 4771761 + pseudogene gene4109 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4059 Amir_4060 Amir_4060 Amir_4060 4772182 4772295 - hypothetical protein gene gene4110 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4060 Amir_4061 Amir_4061 Amir_4061 4772447 4773184 - hypothetical protein gene gene4111 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4061 Amir_4062 Amir_4062 Amir_4062 4773387 4774058 - pseudogene gene4112 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4062 Amir_4063 Amir_4063 Amir_4063 4774149 4774740 - pseudogene gene4113 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4063 Amir_4064 Amir_4064 Amir_4064 4775007 4775516 - GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: bcn:Bcen_3699 GCN5-related N- acetyltransferase gene gene4114 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4064 Amir_4065 Amir_4065 Amir_4065 4775744 4776331 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: afw:Anae109_3254 TetR family transcriptional regulator gene gene4115 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4065 Amir_4066 Amir_4066 Amir_4066 4776466 4776887 + pseudogene gene4116 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4066 Amir_4067 Amir_4067 Amir_4067 4777134 4778316 + pseudogene gene4117 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4067 Amir_4068 Amir_4068 Amir_4068 4778416 4780200 - histidine kinase KEGG: lch:Lcho_2475 histidine kinase~PFAM: ATP-binding region ATPase domain protein%3B histidine kinase HAMP region domain protein%3B histidine kinase A domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B histidine kinase HAMP region domain protein gene gene4118 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4068 Amir_4069 Amir_4069 Amir_4069 4780190 4780888 - two component transcriptional regulator%2C winged helix family PFAM: response regulator receiver%3B transcriptional regulator domain protein~SMART: response regulator receiver~KEGG: sus:Acid_5032 two component transcriptional regulator gene gene4119 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4069 Amir_4070 Amir_4070 Amir_4070 4780947 4782023 + Peptidoglycan-binding domain 1 protein PFAM: Peptidoglycan-binding domain 1 protein~KEGG: gur:Gura_3473 peptidoglycan binding domain- containing protein gene gene4120 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4070 Amir_4071 Amir_4071 Amir_4071 4782020 4782778 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: vco:VC0395_A1173 ABC transporter%2C ATP-binding protein gene gene4121 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4071 Amir_4072 Amir_4072 Amir_4072 4782775 4784049 + protein of unknown function DUF214 PFAM: protein of unknown function DUF214~KEGG: gur:Gura_3474 ABC transporter related gene gene4122 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4072 Amir_4073 Amir_4073 Amir_4073 4784135 4784692 + hypothetical protein gene gene4123 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4073 Amir_4074 Amir_4074 Amir_4074 4784689 4785243 + hypothetical protein gene gene4124 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4074 Amir_4075 Amir_4075 Amir_4075 4785299 4786501 - cysteine desulfurase family protein TIGRFAM: cysteine desulfurase family protein~PFAM: aminotransferase class V%3B aromatic amino acid beta-eliminating lyase/threonine aldolase%3B Cys/Met metabolism pyridoxal-phosphate-dependent protein~KEGG: spe:Spro_3869 cysteine desulfurase family protein gene gene4125 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4075 Amir_4076 Amir_4076 Amir_4076 4786835 4788385 + glucose-methanol-choline oxidoreductase PFAM: glucose-methanol-choline oxidoreductase%3B GMC oxidoreductase~KEGG: scl:sce3486 choline dehydrogenase gene gene4126 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4076 Amir_4077 Amir_4077 Amir_4077 4788393 4789463 + O-methyltransferase family 2 PFAM: O-methyltransferase family 2%3B Methyltransferase type 12%3B Methyltransferase type 11~KEGG: sfu:Sfum_0920 O-methyltransferase%2C family 2 gene gene4127 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4077 Amir_4078 Amir_4078 Amir_4078 4789499 4790074 - alkylhydroperoxidase like protein%2C AhpD family TIGRFAM: alkylhydroperoxidase like protein%2C AhpD family~PFAM: Carboxymuconolactone decarboxylase~KEGG: mxa:MXAN_3277 putative peroxidase%2C selenocysteine-containing gene gene4128 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4078 Amir_4079 Amir_4079 Amir_4079 4790204 4790653 - conserved hypothetical membrane spanning protein KEGG: cbg:CbuG_0320 hypothetical membrane spanning protein gene gene4129 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4079 Amir_4080 Amir_4080 Amir_4080 4790664 4791674 - NAD-dependent epimerase/dehydratase PFAM: NAD-dependent epimerase/dehydratase%3B Male sterility domain%3B KR domain protein%3B 3-beta hydroxysteroid dehydrogenase/isomerase%3B short-chain dehydrogenase/reductase SDR~KEGG: ade:Adeh_0777 NAD-dependent epimerase/dehydratase gene gene4130 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4080 Amir_4081 Amir_4081 Amir_4081 4791735 4792226 - flavin reductase domain protein FMN-binding PFAM: flavin reductase domain protein FMN-binding~KEGG: pde:Pden_2689 flavin reductase domain protein%2C FMN-binding gene gene4131 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4081 Amir_4082 Amir_4082 Amir_4082 4792223 4792681 - conserved hypothetical protein KEGG: pau:PA14_51770 hypothetical protein gene gene4132 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4082 Amir_4083 Amir_4083 Amir_4083 4792683 4798487 - Erythronolide synthase PFAM: Beta-ketoacyl synthase%3B Acyl transferase%3B KR domain protein%3B short-chain dehydrogenase/reductase SDR~KEGG: mca:MCA1238 polyketide synthase gene gene4133 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4083 Amir_4084 Amir_4084 Amir_4084 4798845 4800029 - acyl-CoA dehydrogenase type 2 domain protein PFAM: Acyl-CoA dehydrogenase type 2 domain~KEGG: bur:Bcep18194_B1567 acyl-CoA dehydrogenase- like gene gene4134 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4084 Amir_4085 Amir_4085 Amir_4085 4800084 4801268 - acyl-CoA dehydrogenase type 2 domain protein PFAM: Acyl-CoA dehydrogenase type 2 domain~KEGG: bur:Bcep18194_B1567 acyl-CoA dehydrogenase- like gene gene4135 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4085 Amir_4086 Amir_4086 Amir_4086 4801539 4802792 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: aha:AHA_1643 major facilitator transporter gene gene4136 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4086 Amir_4087 Amir_4087 Amir_4087 4802988 4803509 + transcriptional regulator%2C HxlR family PFAM: helix-turn-helix HxlR type~KEGG: sme:SMc02225 hypothetical protein gene gene4137 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4087 Amir_4088 Amir_4088 Amir_4088 4803494 4804423 - alpha/beta hydrolase fold protein PFAM: alpha/beta hydrolase fold~KEGG: bja:blr8188 putative dehalogenase gene gene4138 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4088 Amir_4089 Amir_4089 Amir_4089 4804602 4805828 - hypothetical protein KEGG: mxa:MXAN_0277 hypothetical protein gene gene4139 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4089 Amir_4090 Amir_4090 Amir_4090 4805992 4807317 - glycosyl transferase family 2 PFAM: glycosyl transferase family 2~KEGG: gbm:Gbem_1049 glycosyl transferase family 2 gene gene4140 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4090 Amir_4091 Amir_4091 Amir_4091 4807459 4808637 - acyl-CoA dehydrogenase type 2 domain protein PFAM: Acyl-CoA dehydrogenase type 2 domain%3B acyl- CoA dehydrogenase domain protein~KEGG: bur:Bcep18194_B1567 acyl-CoA dehydrogenase- like gene gene4141 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4091 Amir_4092 Amir_4092 Amir_4092 4808848 4810080 - Epoxide hydrolase domain protein PFAM: Epoxide hydrolase domain protein%3B alpha/beta hydrolase fold~KEGG: bja:bll7368 putative hydrolase gene gene4142 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4092 Amir_4093 Amir_4093 Amir_4093 4810239 4811012 - protein of unknown function DUF899 thioredoxin family protein PFAM: protein of unknown function DUF899 thioredoxin family protein~KEGG: pmy:Pmen_1335 protein of unknown function DUF899%2C thioredoxin family protein gene gene4143 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4093 Amir_4094 Amir_4094 Amir_4094 4811063 4812199 - oxidoreductase domain protein PFAM: oxidoreductase domain protein%3B Oxidoreductase domain~KEGG: bha:BH0710 hypothetical protein gene gene4144 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4094 Amir_4095 Amir_4095 Amir_4095 4812666 4813643 + hypothetical protein KEGG: bpt:Bpet4347 hypothetical protein gene gene4145 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4095 Amir_4096 Amir_4096 Amir_4096 4813644 4814522 - hypothetical protein gene gene4146 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4096 Amir_4097 Amir_4097 Amir_4097 4814805 4816121 + ABC-1 domain protein PFAM: ABC-1 domain protein~KEGG: rsh:Rsph17029_0006 2-polyprenylphenol 6- hydroxylase gene gene4147 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4097 Amir_4098 Amir_4098 Amir_4098 4816129 4816764 + uncharacterized peroxidase-related enzyme TIGRFAM: uncharacterized peroxidase-related enzyme%3B alkylhydroperoxidase like protein%2C AhpD family~PFAM: Carboxymuconolactone decarboxylase~KEGG: gur:Gura_3352 uncharacterized peroxidase- related enzyme gene gene4148 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4098 Amir_4099 Amir_4099 Amir_4099 4816761 4817639 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B KR domain protein%3B NAD-dependent epimerase/dehydratase~KEGG: msl:Msil_2581 short-chain dehydrogenase/reductase SDR gene gene4149 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4099 Amir_4100 Amir_4100 Amir_4100 4817745 4819292 - glucose-methanol-choline oxidoreductase PFAM: glucose-methanol-choline oxidoreductase%3B GMC oxidoreductase~KEGG: scl:sce3486 choline dehydrogenase gene gene4150 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4100 Amir_4101 Amir_4101 Amir_4101 4819509 4820495 + protein of unknown function DUF1702 PFAM: protein of unknown function DUF1702 gene gene4151 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4101 Amir_4102 Amir_4102 Amir_4102 4820492 4821850 + cytochrome P450 PFAM: cytochrome P450~KEGG: mxa:MXAN_2304 cytochrome P450 family protein gene gene4152 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4102 Amir_4103 Amir_4103 Amir_4103 4821883 4822911 + hypothetical protein KEGG: acp:A2cp1_3940 TPR repeat-containing protein gene gene4153 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4103 Amir_4104 Amir_4104 Amir_4104 4823000 4823752 - transcriptional regulator%2C AraC family PFAM: helix-turn-helix- domain containing protein AraC type~SMART: helix-turn-helix- domain containing protein AraC type~KEGG: bha:BH0851 AraC/XylS family transcriptional regulator gene gene4154 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4104 Amir_4105 Amir_4105 Amir_4105 4824164 4824862 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: rfr:Rfer_0325 TetR family transcriptional regulator gene gene4155 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4105 Amir_4106 Amir_4106 Amir_4106 4824868 4825623 - pseudogene gene4156 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4106 Amir_4107 Amir_4107 Amir_4107 4825735 4826688 - Alcohol dehydrogenase zinc-binding domain protein PFAM: Alcohol dehydrogenase zinc-binding domain protein%3B Alcohol dehydrogenase GroES domain protein~KEGG: swi:Swit_1657 alcohol dehydrogenase gene gene4157 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4107 Amir_4108 Amir_4108 Amir_4108 4826774 4827343 + regulatory protein TetR PFAM: regulatory protein TetR~KEGG: cak:Caul_4437 TetR family transcriptional regulator gene gene4158 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4108 Amir_4109 Amir_4109 Amir_4109 4827390 4827914 - flavin reductase domain protein FMN-binding PFAM: flavin reductase domain protein FMN-binding~KEGG: pde:Pden_2689 flavin reductase domain protein%2C FMN-binding gene gene4159 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4109 Amir_4110 Amir_4110 Amir_4110 4827911 4829209 - Acyl transferase PFAM: Acyl transferase~KEGG: dsh:Dshi_1963 beta-ketoacyl synthase gene gene4160 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4110 Amir_4111 Amir_4111 Amir_4111 4829206 4830240 - hypothetical protein KEGG: mxa:MXAN_7127 FG-GAP repeat protein gene gene4161 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4111 Amir_4112 Amir_4112 Amir_4112 4830237 4832240 - ASPIC/UnbV domain protein PFAM: ASPIC/UnbV domain protein%3B FG-GAP repeat protein~KEGG: mxa:MXAN_7127 FG-GAP repeat protein gene gene4162 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4112 Amir_4113 Amir_4113 Amir_4113 4832516 4833262 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: rpi:Rpic_1138 short-chain dehydrogenase/reductase SDR gene gene4163 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4113 Amir_4114 Amir_4114 Amir_4114 4833383 4834081 - protein of unknown function DUF899 thioredoxin family protein PFAM: protein of unknown function DUF899 thioredoxin family protein~KEGG: pmy:Pmen_1335 protein of unknown function DUF899%2C thioredoxin family protein gene gene4164 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4114 Amir_4115 Amir_4115 Amir_4115 4834113 4835666 - AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: dsh:Dshi_0253 AMP-dependent synthetase and ligase gene gene4165 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4115 Amir_4116 Amir_4116 Amir_4116 4835663 4836493 - Enoyl-CoA hydratase/isomerase PFAM: Enoyl-CoA hydratase/isomerase~KEGG: rec:RHECIAT_PC0000921 enoyl-CoA hydratase protein gene gene4166 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4116 Amir_4117 Amir_4117 Amir_4117 4836901 4838868 + ASPIC/UnbV domain protein PFAM: ASPIC/UnbV domain protein%3B FG-GAP repeat protein~KEGG: mxa:MXAN_7127 FG-GAP repeat protein gene gene4167 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4117 Amir_4118 Amir_4118 Amir_4118 4838906 4839967 + hypothetical protein KEGG: mxa:MXAN_7127 FG-GAP repeat protein gene gene4168 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4118 Amir_4119 Amir_4119 Amir_4119 4840147 4840935 - transcriptional regulator%2C AraC family PFAM: helix-turn-helix- domain containing protein AraC type~SMART: helix-turn-helix- domain containing protein AraC type~KEGG: bha:BH0851 AraC/XylS family transcriptional regulator gene gene4169 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4119 Amir_4120 Amir_4120 Amir_4120 4841924 4842496 + hypothetical protein gene gene4170 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4120 Amir_4121 Amir_4121 Amir_4121 4842501 4844030 + hypothetical protein KEGG: GK18511 gene product from transcript GK18511- RA gene gene4171 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4121 Amir_4122 Amir_4122 Amir_4122 4844163 4845989 + FAD-dependent pyridine nucleotide-disulphide oxidoreductase PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase%3B FAD dependent oxidoreductase~KEGG: azc:AZC_2089 hypothetical protein gene gene4172 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4122 Amir_4123 Amir_4123 Amir_4123 4846114 4847415 + PEP-utilizing protein PFAM: PEP-utilizing protein~KEGG: ccs:CCNA_00571 phosphoenolpyruvate-protein phosphotransferase/phosphocarrier protein HPr/PTS system%2C glucose-specific IIA subunit gene gene4173 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4123 Amir_4124 Amir_4124 Amir_4124 4847422 4849437 - Isoquinoline 1-oxidoreductase KEGG: ade:Adeh_3102 molybdopterin-binding xanthine dehydrogenase gene gene4174 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4124 Amir_4125 Amir_4125 Amir_4125 4849434 4849898 - (2Fe-2S)-binding domain protein PFAM: [2Fe-2S]-binding domain protein%3B ferredoxin~KEGG: mxa:MXAN_1751 isoquinoline 1-oxidoreductase%2C alpha subunit gene gene4175 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4125 Amir_4126 Amir_4126 Amir_4126 4850121 4850249 + hypothetical protein gene gene4176 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4126 Amir_4127 Amir_4127 Amir_4127 4850429 4853086 - SNF2-related protein PFAM: SNF2-related protein%3B helicase domain protein~SMART: DEAD-like helicase%3B helicase domain protein~KEGG: scl:sce2990 hypothetical protein gene gene4177 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4127 Amir_4128 Amir_4128 Amir_4128 4853202 4856597 + helicase domain protein PFAM: helicase domain protein%3B SNF2-related protein%3B type III restriction protein res subunit~SMART: helicase domain protein%3B DEAD-like helicase~KEGG: xau:Xaut_2988 helicase domain-containing protein gene gene4178 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4128 Amir_4129 Amir_4129 Amir_4129 4856688 4857368 - hypothetical protein KEGG: hypothetical protein gene gene4179 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4129 Amir_4130 Amir_4130 Amir_4130 4857632 4858666 - transcriptional regulator%2C LacI family KEGG: scl:sce0662 LacI family transcription regulator~PFAM: periplasmic binding protein/LacI transcriptional regulator%3B regulatory protein LacI~SMART: regulatory protein LacI gene gene4180 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4130 Amir_4131 Amir_4131 Amir_4131 4858782 4860689 + Mannan endo-1%2C4-beta-mannosidase KEGG: scl:sce0661 Mannan endo-1%2C4-beta-mannosidase gene gene4181 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4131 Amir_4132 Amir_4132 Amir_4132 4860686 4861909 + Mandelate racemase/muconate lactonizing protein PFAM: Mandelate racemase/muconate lactonizing protein~KEGG: ccs:CCNA_02903 starvation sensing protein RspA gene gene4182 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4132 Amir_4133 Amir_4133 Amir_4133 4862064 4862561 + hypothetical protein gene gene4183 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4133 Amir_4134 Amir_4134 Amir_4134 4862679 4864289 + cellulose-binding family II PFAM: cellulose-binding family II~SMART: cellulose-binding family II~KEGG: scl:sce2212 putative topoisomerase gene gene4184 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4134 Amir_4135 Amir_4135 Amir_4135 4864350 4865732 - monooxygenase FAD-binding PFAM: monooxygenase FAD-binding%3B FAD dependent oxidoreductase~KEGG: met:M446_1000 hypothetical protein gene gene4185 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4135 Amir_4136 Amir_4136 Amir_4136 4866204 4866674 - Calcium/calmodulin dependent protein kinase II association-domain protein PFAM: Calcium/calmodulin dependent protein kinase II association-domain protein~KEGG: pfl:PFL_3821 hypothetical protein gene gene4186 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4136 Amir_4137 Amir_4137 Amir_4137 4866773 4868119 - histidine kinase PFAM: ATP-binding region ATPase domain protein%3B histidine kinase HAMP region domain protein%3B histidine kinase A domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B histidine kinase HAMP region domain protein~KEGG: ppu:PP_4505 integral membrane sensor signal transduction histidine kinase gene gene4187 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4137 Amir_4138 Amir_4138 Amir_4138 4868119 4868856 - two component transcriptional regulator%2C winged helix family PFAM: response regulator receiver%3B transcriptional regulator domain protein~SMART: response regulator receiver~KEGG: bte:BTH_II1765 DNA-binding response regulator gene gene4188 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4138 Amir_4139 Amir_4139 Amir_4139 4869007 4870872 - hypothetical protein KEGG: fibrocystin-L-like protein gene gene4189 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4139 Amir_4140 Amir_4140 Amir_4140 4870916 4871779 - hypothetical protein gene gene4190 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4140 Amir_4141 Amir_4141 Amir_4141 4872275 4874623 - aminoglycoside phosphotransferase PFAM: aminoglycoside phosphotransferase~KEGG: bps:BPSL0571 hypothetical protein gene gene4191 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4141 Amir_4142 Amir_4142 Amir_4142 4874586 4875404 - conserved hypothetical protein KEGG: dac:Daci_2301 hypothetical protein gene gene4192 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4142 Amir_4143 Amir_4143 Amir_4143 4875413 4876252 - von Willebrand factor type A SMART: von Willebrand factor type A~KEGG: dac:Daci_2300 hypothetical protein gene gene4193 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4143 Amir_4144 Amir_4144 Amir_4144 4876453 4877442 + Pirin domain protein PFAM: Pirin domain protein~KEGG: pap:PSPA7_4173 hypothetical protein gene gene4194 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4144 Amir_4145 Amir_4145 Amir_4145 4877596 4879023 - conserved hypothetical protein KEGG: mxa:MXAN_0224 hypothetical protein gene gene4195 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4145 Amir_4146 Amir_4146 Amir_4146 4879355 4879603 + hypothetical protein gene gene4196 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4146 Amir_4147 Amir_4147 Amir_4147 4879564 4879800 + hypothetical protein gene gene4197 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4147 Amir_4148 Amir_4148 Amir_4148 4879912 4880748 + alpha/beta hydrolase fold protein PFAM: alpha/beta hydrolase fold%3B PGAP1 family protein~KEGG: sml:Smlt0507 putative arylesterase (aryl- ester hydrolase) gene gene4198 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4148 Amir_4149 Amir_4149 Amir_4149 4880803 4881765 - Ricin B lectin PFAM: Ricin B lectin~SMART: Ricin B lectin~KEGG: dsh:Dshi_3592 Cna B domain-containing protein gene gene4199 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4149 Amir_4150 Amir_4150 Amir_4150 4882198 4883199 - Ricin B lectin PFAM: Ricin B lectin~SMART: Ricin B lectin~KEGG: hypothetical protein gene gene4200 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4150 Amir_4151 Amir_4151 Amir_4151 4883864 4884826 - Ricin B lectin PFAM: Ricin B lectin~SMART: Ricin B lectin~KEGG: hdu:HD0746 endo-1%2C4-beta-xylanase A gene gene4201 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4151 Amir_4152 Amir_4152 Amir_4152 4885000 4886349 - cellulose-binding family II PFAM: cellulose-binding family II%3B glycoside hydrolase family 5~SMART: cellulose-binding family II~KEGG: sde:Sde_0064 putative secreted beta- mannosidase gene gene4202 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4152 Amir_4153 Amir_4153 Amir_4153 4886550 4888169 - hypothetical protein KEGG: mno:Mnod_3288 hypothetical protein gene gene4203 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4153 Amir_4154 Amir_4154 Amir_4154 4888507 4890438 + conserved hypothetical protein KEGG: pap:PSPA7_4431 hypothetical protein gene gene4204 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4154 Amir_4155 Amir_4155 Amir_4155 4890557 4891486 + lipolytic protein G-D-S-L family PFAM: lipolytic protein G-D-S-L family~KEGG: bvi:Bcep1808_2033 allergen V5/TPX-1 family protein gene gene4205 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4155 Amir_4156 Amir_4156 Amir_4156 4891759 4892562 + hypothetical protein KEGG: hypothetical LOC100006405 gene gene4206 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4156 Amir_4157 Amir_4157 Amir_4157 4892613 4893224 + hypothetical protein KEGG: hypothetical protein gene gene4207 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4157 Amir_4158 Amir_4158 Amir_4158 4893344 4893847 + peptide methionine sulfoxide reductase TIGRFAM: peptide methionine sulfoxide reductase~PFAM: Methionine sulfoxide reductase A~KEGG: bxe:Bxe_B0562 methionine sulfoxide reductase A gene gene4208 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4158 Amir_4159 Amir_4159 Amir_4159 4894193 4895020 - citrate synthase KEGG: rme:Rmet_4144 citrate synthase gene gene4209 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4159 Amir_4160 Amir_4160 Amir_4160 4895017 4896240 - L-carnitine dehydratase/bile acid-inducible protein F PFAM: L-carnitine dehydratase/bile acid-inducible protein F~KEGG: rme:Rmet_4145 L-carnitine dehydratase/bile acid-inducible protein F gene gene4210 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4160 Amir_4161 Amir_4161 Amir_4161 4896237 4897748 - protein of unknown function DUF112 transmembrane PFAM: protein of unknown function DUF112 transmembrane~KEGG: bpt:Bpet0754 hypothetical protein gene gene4211 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4161 Amir_4162 Amir_4162 Amir_4162 4897748 4898335 - conserved hypothetical protein KEGG: bja:blr3162 hypothetical protein gene gene4212 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4162 Amir_4163 Amir_4163 Amir_4163 4898332 4899318 - conserved hypothetical protein PFAM: conserved hypothetical protein~KEGG: oan:Oant_3917 uncharacterized protein UPF0065 gene gene4213 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4163 Amir_4164 Amir_4164 Amir_4164 4899456 4900235 + transcriptional regulator%2C IclR family PFAM: regulatory protein IclR%3B Transcriptional regulator IclR~SMART: regulatory protein IclR~KEGG: cti:RALTA_B1947 putative transcriptional regulator%2C IclR family gene gene4214 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4164 Amir_4165 Amir_4165 Amir_4165 4900292 4900882 + Dimethylmenaquinone methyltransferase PFAM: Dimethylmenaquinone methyltransferase~KEGG: mrd:Mrad2831_3497 dimethylmenaquinone methyltransferase gene gene4215 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4165 Amir_4166 Amir_4166 Amir_4166 4900890 4901810 + D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding%3B D-isomer specific 2-hydroxyacid dehydrogenase catalytic region~KEGG: ppf:Pput_1368 D-isomer specific 2-hydroxyacid dehydrogenase%2C NAD-binding gene gene4216 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4166 Amir_4167 Amir_4167 Amir_4167 4902799 4903947 - hypothetical protein KEGG: hypothetical protein gene gene4217 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4167 Amir_4168 Amir_4168 Amir_4168 4904208 4905146 - protein of unknown function DUF1177 PFAM: protein of unknown function DUF1177~KEGG: vei:Veis_1102 protein of unknown function DUF1177 gene gene4218 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4168 Amir_4169 Amir_4169 Amir_4169 4905242 4905883 - Asp/Glu/hydantoin racemase PFAM: Asp/Glu/hydantoin racemase~KEGG: jan:Jann_1486 Asp/Glu racemase gene gene4219 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4169 Amir_4170 Amir_4170 Amir_4170 4905880 4906599 - AroM family protein PFAM: AroM family protein~KEGG: spe:Spro_1025 hypothetical protein gene gene4220 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4170 Amir_4171 Amir_4171 Amir_4171 4906592 4908292 - Oligopeptide transporter OPT superfamily protein PFAM: Oligopeptide transporter OPT superfamily protein~KEGG: vei:Veis_1103 oligopeptide transporter OPT superfamily protein gene gene4221 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4171 Amir_4172 Amir_4172 Amir_4172 4908305 4909054 - transcriptional regulator%2C IclR family PFAM: regulatory protein IclR%3B Transcriptional regulator IclR~SMART: regulatory protein IclR~KEGG: reu:Reut_B5545 regulatory protein%2C IclR gene gene4222 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4172 Amir_4173 Amir_4173 Amir_4173 4909181 4909930 + Dipeptidase E PFAM: peptidase S51 dipeptidase E~KEGG: AGAP000513-PA%3B K05995 dipeptidase E gene gene4223 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4173 Amir_4174 Amir_4174 Amir_4174 4910160 4911641 + serine/threonine protein kinase PFAM: Serine/threonine protein kinase-related%3B tyrosine protein kinase%3B cellulose-binding family II~SMART: serine/threonine protein kinase%3B cellulose- binding family II%3B tyrosine protein kinase~KEGG: acp:A2cp1_2229 serine/threonine protein kinase with TPR repeats gene gene4224 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4174 Amir_4175 Amir_4175 Amir_4175 4911853 4913475 + hypothetical protein gene gene4225 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4175 Amir_4176 Amir_4176 Amir_4176 4913829 4915280 + hypothetical protein gene gene4226 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4176 Amir_4177 Amir_4177 Amir_4177 4915343 4916635 - Pectate lyase PFAM: Pectate lyase%3B Ricin B lectin~SMART: Ricin B lectin~KEGG: hypothetical protein gene gene4227 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4177 Amir_4178 Amir_4178 Amir_4178 4916834 4917778 - Alcohol dehydrogenase GroES domain protein PFAM: Alcohol dehydrogenase GroES domain protein%3B Alcohol dehydrogenase zinc-binding domain protein~KEGG: msl:Msil_0872 alcohol dehydrogenase GroES domain protein gene gene4228 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4178 Amir_4179 Amir_4179 Amir_4179 4917920 4918420 + transcriptional regulator%2C MarR family PFAM: regulatory protein MarR~SMART: regulatory protein MarR~KEGG: abo:ABO_0014 MarR family transcriptional regulator gene gene4229 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4179 Amir_4180 Amir_4180 Amir_4180 4918488 4919435 + D-aspartate oxidase PFAM: FAD dependent oxidoreductase~KEGG: similar to D-aspartate oxidase%3B K00272 D- aspartate oxidase gene gene4230 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4180 Amir_4181 Amir_4181 Amir_4181 4919670 4920449 + methionine aminopeptidase%2C type I TIGRFAM: methionine aminopeptidase%2C type I~PFAM: peptidase M24~KEGG: afw:Anae109_1933 methionine aminopeptidase%2C type I gene gene4231 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4181 Amir_4182 Amir_4182 Amir_4182 4920537 4922609 - AAA ATPase SMART: AAA ATPase%3B Tetratricopeptide domain protein~KEGG: scl:sce5225 protein kinase gene gene4232 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4182 Amir_4183 Amir_4183 Amir_4183 4922638 4924287 - Tetratricopeptide TPR_4 PFAM: Tetratricopeptide TPR_4~SMART: Tetratricopeptide domain protein~KEGG: bcu:BCAH820_0093 putative DNA-binding protein gene gene4233 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4183 Amir_4184 Amir_4184 Amir_4184 4924654 4926264 + methyl-accepting chemotaxis sensory transducer PFAM: chemotaxis sensory transducer%3B histidine kinase HAMP region domain protein~SMART: chemotaxis sensory transducer%3B histidine kinase HAMP region domain protein~KEGG: aba:Acid345_1672 methyl-accepting chemotaxis sensory transducer gene gene4234 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4184 Amir_4185 Amir_4185 Amir_4185 4926336 4927892 - apolipoprotein N-acyltransferase TIGRFAM: apolipoprotein N-acyltransferase~PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase~KEGG: abo:ABO_1940 apolipoprotein N-acyltransferase gene gene4235 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4185 Amir_4186 Amir_4186 Amir_4186 4927987 4929573 - hypothetical protein KEGG: met:M446_3732 von Willebrand factor type A gene gene4236 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4186 Amir_4187 Amir_4187 Amir_4187 4929747 4930685 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: oxidoreductase protein gene gene4237 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4187 Amir_4188 Amir_4188 Amir_4188 4930876 4931772 + transcriptional regulator%2C XRE family SMART: helix-turn-helix domain protein~KEGG: acr:Acry_0313 XRE family transcriptional regulator gene gene4238 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4188 Amir_4189 Amir_4189 Amir_4189 4931836 4932681 - alpha/beta hydrolase fold protein PFAM: alpha/beta hydrolase fold~KEGG: alpha/beta hydrolase protein gene gene4239 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4189 Amir_4190 Amir_4190 Amir_4190 4932779 4933255 + transcriptional regulator%2C MarR family PFAM: regulatory protein MarR~SMART: regulatory protein MarR~KEGG: scl:sce8843 MarR family transcriptional regulator gene gene4240 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4190 Amir_4191 Amir_4191 Amir_4191 4933363 4934979 + methyl-accepting chemotaxis sensory transducer PFAM: chemotaxis sensory transducer%3B histidine kinase HAMP region domain protein~SMART: chemotaxis sensory transducer%3B histidine kinase HAMP region domain protein~KEGG: aba:Acid345_1672 methyl-accepting chemotaxis sensory transducer gene gene4241 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4191 Amir_4192 Amir_4192 Amir_4192 4935123 4935548 + ferric uptake regulator%2C Fur family PFAM: ferric-uptake regulator~KEGG: hhe:HH0942 transcriptional regulator gene gene4242 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4192 Amir_4193 Amir_4193 Amir_4193 4935633 4937861 + catalase/peroxidase HPI TIGRFAM: catalase/peroxidase HPI~PFAM: Haem peroxidase~KEGG: pol:Bpro_0678 catalase/peroxidase HPI gene gene4243 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4193 Amir_4194 Amir_4194 Amir_4194 4938033 4941230 - peptidase S8 and S53 subtilisin kexin sedolisin PFAM: peptidase S8 and S53 subtilisin kexin sedolisin~KEGG: she:Shewmr4_1596 peptidase S8 and S53%2C subtilisin%2C kexin%2C sedolisin gene gene4244 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4194 Amir_4195 Amir_4195 Amir_4195 4941518 4944778 - peptidase S8 and S53 subtilisin kexin sedolisin PFAM: peptidase S8 and S53 subtilisin kexin sedolisin~KEGG: she:Shewmr4_1596 peptidase S8 and S53%2C subtilisin%2C kexin%2C sedolisin gene gene4245 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4195 Amir_4196 Amir_4196 Amir_4196 4945227 4947227 - conserved repeat domain protein TIGRFAM: conserved repeat domain protein~PFAM: Cna B domain protein~KEGG: gme:Gmet_2043 hypothetical protein gene gene4246 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4196 Amir_4197 Amir_4197 Amir_4197 4947433 4947585 + hypothetical protein gene gene4247 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4197 Amir_4198 Amir_4198 Amir_4198 4947727 4949190 + Pectinesterase KEGG: xca:xccb100_0130 exported pectinesterase~PFAM: Pectinesterase%3B Ricin B lectin~SMART: Ricin B lectin gene gene4248 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4198 Amir_4199 Amir_4199 Amir_4199 4949211 4950635 + Ricin B lectin PFAM: Ricin B lectin%3B Pectate lyase/Amb allergen~SMART: Ricin B lectin%3B Parallel beta-helix repeat%3B Pectate lyase/Amb allergen~KEGG: bha:BH0698 pectate lyase gene gene4249 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4199 Amir_4200 Amir_4200 Amir_4200 4950817 4951386 + hypothetical protein gene gene4250 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4200 Amir_4201 Amir_4201 Amir_4201 4951417 4952217 - precorrin-6A synthase (deacetylating) KEGG: mrd:Mrad2831_1538 precorrin-6A synthase (deacetylating)~TIGRFAM: precorrin-6A synthase (deacetylating)~PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase gene gene4251 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4201 Amir_4202 Amir_4202 Amir_4202 4952264 4952878 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: sus:Acid_4679 TetR family transcriptional regulator gene gene4252 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4202 Amir_4203 Amir_4203 Amir_4203 4952923 4954386 + monooxygenase FAD-binding PFAM: monooxygenase FAD-binding%3B FAD dependent oxidoreductase~KEGG: bsu:BSU10500 hypothetical protein gene gene4253 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4203 Amir_4204 Amir_4204 Amir_4204 4954489 4955736 - diaminobutyrate/2-oxoglutarate aminotransferase TIGRFAM: diaminobutyrate/2-oxoglutarate aminotransferase%3B 2%2C4-diaminobutyrate 4-transaminase~PFAM: aminotransferase class-III~KEGG: aeh:Mlg_1191 diaminobutyrate--2-oxoglutarate aminotransferase gene gene4254 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4204 Amir_4205 Amir_4205 Amir_4205 4955816 4956940 - APA family basic amino acid/polyamine antiporter KEGG: bmj:BMULJ_04091 APA family basic amino acid/polyamine antiporter gene gene4255 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4205 Amir_4206 Amir_4206 Amir_4206 4956937 4958292 - L-ornithine 5-monooxygenase oxidoreductase protein KEGG: rso:RSp1425 L-ornithine 5-monooxygenase oxidoreductase protein gene gene4256 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4206 Amir_4207 Amir_4207 Amir_4207 4958336 4959415 - FAD dependent oxidoreductase PFAM: FAD dependent oxidoreductase~KEGG: bpy:Bphyt_0284 FAD dependent oxidoreductase gene gene4257 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4207 Amir_4208 Amir_4208 Amir_4208 4959412 4961349 - Methionine--tRNA ligase PFAM: tRNA synthetase class I (M)%3B Cupin 2 conserved barrel domain protein~KEGG: pen:PSEEN0982 methionine--tRNA ligase gene gene4258 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4208 Amir_4209 Amir_4209 Amir_4209 4961555 4962097 - conserved hypothetical protein KEGG: hypothetical protein gene gene4259 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4209 Amir_4210 Amir_4210 Amir_4210 4962201 4963190 - protein of unknown function DUF6 transmembrane PFAM: protein of unknown function DUF6 transmembrane~KEGG: tmz:Tmz1t_1271 hypothetical protein gene gene4260 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4210 Amir_4211 Amir_4211 Amir_4211 4963227 4964516 - monooxygenase FAD-binding PFAM: monooxygenase FAD-binding%3B FAD dependent oxidoreductase~KEGG: rso:RS03119 putative transmembrane protein gene gene4261 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4211 Amir_4212 Amir_4212 Amir_4212 4964563 4965288 - Rhodanese domain protein PFAM: Rhodanese domain protein~SMART: Rhodanese domain protein~KEGG: rso:RS03114 hypothetical protein gene gene4262 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4212 Amir_4213 Amir_4213 Amir_4213 4965298 4966953 - AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: rso:RS03108 hypothetical protein gene gene4263 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4213 Amir_4214 Amir_4214 Amir_4214 4966937 4967851 - Alpha/beta hydrolase fold-3 domain protein PFAM: Alpha/beta hydrolase fold-3 domain protein~KEGG: rso:RS03113 esterase protein gene gene4264 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4214 Amir_4215 Amir_4215 Amir_4215 4967856 4969499 - amino acid adenylation domain protein TIGRFAM: amino acid adenylation domain protein~PFAM: AMP-dependent synthetase and ligase~KEGG: rso:RS03108 hypothetical protein gene gene4265 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4215 Amir_4216 Amir_4216 Amir_4216 4969496 4969954 - GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: rso:RS03106 putative acetyltransferase protein gene gene4266 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4216 Amir_4217 Amir_4217 Amir_4217 4969966 4970487 - conserved hypothetical protein KEGG: rso:RS03105 hypothetical protein gene gene4267 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4217 Amir_4218 Amir_4218 Amir_4218 4971419 4972321 + transcriptional regulator%2C LysR family PFAM: regulatory protein LysR%3B LysR substrate- binding~KEGG: aha:AHA_4117 regulatory protein%2C LysR:LysR%2C substrate-binding gene gene4268 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4218 Amir_4219 Amir_4219 Amir_4219 4972422 4973201 + inositol monophosphatase PFAM: inositol monophosphatase~KEGG: rru:Rru_A1076 inositol monophosphatase gene gene4269 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4219 Amir_4220 Amir_4220 Amir_4220 4973198 4973830 + NAD-dependent epimerase/dehydratase PFAM: NAD-dependent epimerase/dehydratase~KEGG: dsh:Dshi_0026 NAD-dependent epimerase/dehydratase gene gene4270 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4220 Amir_4221 Amir_4221 Amir_4221 4974321 4974875 + conserved hypothetical protein KEGG: hypothetical protein gene gene4271 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4221 Amir_4222 Amir_4222 Amir_4222 4974882 4975214 + hypothetical protein gene gene4272 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4222 Amir_4223 Amir_4223 Amir_4223 4975211 4976107 + hypothetical protein KEGG: GK21128 gene product from transcript GK21128- RA gene gene4273 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4223 Amir_4224 Amir_4224 Amir_4224 4976219 4976980 - hypothetical protein gene gene4274 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4224 Amir_4225 Amir_4225 Amir_4225 4977378 4979276 + glycoside hydrolase family 5 PFAM: glycoside hydrolase family 5~KEGG: hypothetical protein gene gene4275 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4225 Amir_4226 Amir_4226 Amir_4226 4979319 4980107 + hypothetical protein KEGG: hypothetical protein gene gene4276 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4226 Amir_4227 Amir_4227 Amir_4227 4980190 4980525 + transcriptional regulator%2C ArsR family PFAM: regulatory protein ArsR~SMART: regulatory protein ArsR~KEGG: bcz:pE33L466_0439 transcriptional regulator gene gene4277 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4227 Amir_4228 Amir_4228 Amir_4228 4980522 4982132 + sulphate transporter PFAM: sulphate transporter%3B Sulfate transporter/antisigma-factor antagonist STAS%3B Xanthine/uracil/vitamin C permease~KEGG: net:Neut_0352 sulphate transporter gene gene4278 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4228 Amir_4229 Amir_4229 Amir_4229 4982163 4982939 - transcriptional regulator%2C MerR family PFAM: regulatory protein MerR~SMART: regulatory protein MerR~KEGG: atc:AGR_pAT_269 hypothetical protein gene gene4279 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4229 Amir_4230 Amir_4230 Amir_4230 4983064 4983708 + hypothetical protein gene gene4280 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4230 Amir_4231 Amir_4231 Amir_4231 4983795 4984361 - regulatory protein TetR PFAM: regulatory protein TetR~KEGG: bcm:Bcenmc03_5854 hypothetical protein gene gene4281 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4231 Amir_4232 Amir_4232 Amir_4232 4984434 4984913 + hypothetical protein gene gene4282 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4232 Amir_4233 Amir_4233 Amir_4233 4984945 4985376 + pyridoxamine 5'-phosphate oxidase-related FMN- binding PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding gene gene4283 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4233 Amir_4234 Amir_4234 Amir_4234 4985692 4986588 + methyltransferase TIGRFAM: methyltransferase~PFAM: O-methyltransferase domain protein~KEGG: bur:Bcep18194_B1573 protein of unknown function Mtu_121 gene gene4284 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4234 Amir_4235 Amir_4235 Amir_4235 4986728 4987930 + cytochrome P450 PFAM: cytochrome P450~KEGG: bca:BCE_2696 cytochrome P450 gene gene4285 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4235 Amir_4236 Amir_4236 Amir_4236 4988138 4989745 + ATP-dependent DNA helicase%2C RecQ family KEGG: sus:Acid_0740 ATP-dependent DNA helicase RecQ~TIGRFAM: ATP-dependent DNA helicase%2C RecQ family~PFAM: DEAD/DEAH box helicase domain protein%3B helicase domain protein~SMART: DEAD-like helicase%3B helicase domain protein gene gene4286 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4236 Amir_4237 Amir_4237 Amir_4237 4989937 4990638 + Endo-1%2C4-beta-xylanase PFAM: glycoside hydrolase family 11~KEGG: sde:Sde_3061 xylanase/chitin deacetylase-like gene gene4287 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4237 Amir_4238 Amir_4238 Amir_4238 4990794 4996277 - Carbamoyl-phosphate synthase L chain ATP- binding PFAM: Carbamoyl-phosphate synthase L chain ATP- binding%3B biotin carboxylase domain protein%3B ATP-dependent carboxylate-amine ligase domain protein ATP-grasp%3B carboxyl transferase%3B biotin/lipoyl attachment domain- containing protein%3B Carbamoyl-phosphate synthetase large chain domain protein~KEGG: aba:Acid345_0466 carbamoyl-phosphate synthase L chain%2C ATP-binding gene gene4288 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4238 Amir_4239 Amir_4239 Amir_4239 4996684 4997490 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: oan:Oant_2483 binding-protein-dependent transport systems inner membrane component gene gene4289 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4239 Amir_4240 Amir_4240 Amir_4240 4997487 4998392 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: xfm:Xfasm12_1606 ABC transporter sugar permease gene gene4290 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4240 Amir_4241 Amir_4241 Amir_4241 4998389 4999657 - extracellular solute-binding protein family 1 PFAM: extracellular solute-binding protein family 1~KEGG: sit:TM1040_3216 extracellular solute-binding protein gene gene4291 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4241 Amir_4242 Amir_4242 Amir_4242 5000032 5000559 + hypothetical protein gene gene4292 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4242 Amir_4243 Amir_4243 Amir_4243 5000650 5001642 - aldo/keto reductase PFAM: aldo/keto reductase~KEGG: cak:Caul_4616 aldo/keto reductase gene gene4293 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4243 Amir_4244 Amir_4244 Amir_4244 5001773 5002636 + helix-turn-helix domain protein SMART: helix-turn-helix domain protein~KEGG: rle:RL4049 hypothetical protein gene gene4294 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4244 Amir_4245 Amir_4245 Amir_4245 5002809 5003219 + hypothetical protein KEGG: sml:Smlt3526 putative outer membrane lipoprotein gene gene4295 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4245 Amir_4246 Amir_4246 Amir_4246 5003295 5004182 - transcriptional regulator%2C LysR family PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: aav:Aave_0303 transcriptional regulator%2C LysR family gene gene4296 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4246 Amir_4247 Amir_4247 Amir_4247 5004188 5005015 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B KR domain protein%3B Male sterility domain%3B NAD-dependent epimerase/dehydratase~KEGG: rpb:RPB_0526 short chain dehydrogenase gene gene4297 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4247 Amir_4248 Amir_4248 Amir_4248 5005205 5006023 + hypothetical protein gene gene4298 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4248 Amir_4249 Amir_4249 Amir_4249 5006027 5007454 + hypothetical protein gene gene4299 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4249 Amir_4250 Amir_4250 Amir_4250 5007451 5009280 + hypothetical protein KEGG: bvi:Bcep1808_7108 ATPase gene gene4300 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4250 Amir_4251 Amir_4251 Amir_4251 5009351 5010694 - oxidoreductase%2C short chain dehydrogenase/reductase family KEGG: mxa:MXAN_1171 oxidoreductase%2C short chain dehydrogenase/reductase family gene gene4301 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4251 Amir_4252 Amir_4252 Amir_4252 5011299 5011709 - conserved hypothetical protein KEGG: sme:SMa0312 hypothetical protein gene gene4306 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4252 Amir_4253 Amir_4253 Amir_4253 5011825 5012421 + Galactoside O-acetyltransferase KEGG: scl:sce1386 galactoside O-acetyltransferase gene gene4307 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4253 Amir_4254 Amir_4254 Amir_4254 5012444 5012707 - hypothetical protein gene gene4308 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4254 Amir_4255 Amir_4255 Amir_4255 5012927 5014051 + hypothetical protein KEGG: excinuclease ABC C subunit domain protein gene gene4309 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4255 Amir_4256 Amir_4256 Amir_4256 5014057 5015076 - D-alanine--D-alanine ligase KEGG: rce:RC1_0609 D-alanine--D-alanine ligase B gene gene4310 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4256 Amir_4257 Amir_4257 Amir_4257 5015080 5016369 - hypothetical protein KEGG: predicted protein gene gene4311 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4257 Amir_4258 Amir_4258 Amir_4258 5016432 5017286 - O-methyltransferase family 3 PFAM: O-methyltransferase family 3~KEGG: zgc:113054 gene gene4312 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4258 Amir_4259 Amir_4259 Amir_4259 5017283 5018503 - 3-dehydroquinate synthase PFAM: 3-dehydroquinate synthase~KEGG: hypothetical protein%3B K01735 3- dehydroquinate synthase gene gene4313 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4259 Amir_4260 Amir_4260 Amir_4260 5018912 5019565 - two component transcriptional regulator%2C LuxR family PFAM: response regulator receiver%3B regulatory protein LuxR%3B Sigma-70 region 4 type 2~SMART: response regulator receiver%3B regulatory protein LuxR~KEGG: scl:sce5431 two-component system response regulator gene gene4314 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4260 Amir_4261 Amir_4261 Amir_4261 5019589 5020878 - histidine kinase PFAM: histidine kinase dimerization and phosphoacceptor region%3B ATP-binding region ATPase domain protein~KEGG: scl:sce5432 putative two-component system sensor kinase gene gene4315 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4261 Amir_4262 Amir_4262 Amir_4262 5020949 5023036 - beta-lactamase PFAM: beta-lactamase~KEGG: swi:Swit_4612 beta-lactamase gene gene4316 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4262 Amir_4263 Amir_4263 Amir_4263 5023373 5023705 - hypothetical protein gene gene4317 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4263 Amir_4264 Amir_4264 Amir_4264 5023702 5023800 - hypothetical protein gene gene4318 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4264 Amir_4265 Amir_4265 Amir_4265 5024123 5027659 - hypothetical protein KEGG: bur:Bcep18194_B1559 hypothetical protein gene gene4319 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4265 Amir_4266 Amir_4266 Amir_4266 5027774 5030689 - hypothetical protein KEGG: bur:Bcep18194_B1559 hypothetical protein gene gene4320 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4266 Amir_4267 Amir_4267 Amir_4267 5030801 5031103 + hypothetical protein gene gene4321 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4267 Amir_4268 Amir_4268 Amir_4268 5031123 5031530 - Endoribonuclease L-PSP PFAM: Endoribonuclease L-PSP~KEGG: scl:sce5646 hypothetical protein gene gene4322 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4268 Amir_4269 Amir_4269 Amir_4269 5031607 5032377 + protein of unknown function DUF124 PFAM: protein of unknown function DUF124~KEGG: protein of unknown function DUF124 gene gene4323 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4269 Amir_4270 Amir_4270 Amir_4270 5032445 5032686 - pseudogene gene4324 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4270 Amir_4271 Amir_4271 Amir_4271 5033153 5033401 + hypothetical protein gene gene4325 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4271 Amir_4272 Amir_4272 Amir_4272 5033537 5034286 - alpha/beta hydrolase fold protein PFAM: alpha/beta hydrolase fold~KEGG: swi:Swit_1445 alpha/beta hydrolase fold gene gene4326 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4272 Amir_4273 Amir_4273 Amir_4273 5034388 5034825 + transcriptional regulator%2C MarR family PFAM: regulatory protein MarR~SMART: regulatory protein MarR~KEGG: rpb:RPB_1659 MarR family transcriptional regulator gene gene4327 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4273 Amir_4274 Amir_4274 Amir_4274 5034949 5035632 + conserved hypothetical protein KEGG: aba:Acid345_2268 hypothetical protein gene gene4328 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4274 Amir_4275 Amir_4275 Amir_4275 5035654 5038338 - transcriptional regulator%2C LuxR family PFAM: regulatory protein LuxR~SMART: regulatory protein LuxR~KEGG: afw:Anae109_3347 transcriptional activator domain-containing protein gene gene4329 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4275 Amir_4276 Amir_4276 Amir_4276 5038430 5038561 - hypothetical protein gene gene4330 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4276 Amir_4277 Amir_4277 Amir_4277 5038992 5040149 - NADH:flavin oxidoreductase/NADH oxidase PFAM: NADH:flavin oxidoreductase/NADH oxidase~KEGG: pfl:PFL_0942 Oye family NADH-dependent flavin oxidoreductase gene gene4331 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4277 Amir_4278 Amir_4278 Amir_4278 5040280 5040879 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: bbt:BBta_0873 TetR family transcriptional regulator gene gene4332 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4278 Amir_4279 Amir_4279 Amir_4279 5040990 5041976 + aminoglycoside phosphotransferase PFAM: aminoglycoside phosphotransferase~KEGG: scl:sce5395 aminoglycoside phosphotransferase gene gene4333 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4279 Amir_4280 Amir_4280 Amir_4280 5041976 5043313 + MATE efflux family protein TIGRFAM: MATE efflux family protein~PFAM: multi antimicrobial extrusion protein MatE~KEGG: scl:sce5396 hypothetical protein gene gene4334 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4280 Amir_4281 Amir_4281 Amir_4281 5043300 5044298 - hydrolase family protein KEGG: spe:Spro_1475 hydrolase family protein gene gene4335 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4281 Amir_4282 Amir_4282 Amir_4282 5044329 5045093 + putative transcriptional regulator%2C PaaX family KEGG: bha:BH0194 repressor in the phenylacetic acid catabolic pathway gene gene4336 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4282 Amir_4283 Amir_4283 Amir_4283 5045098 5045472 - transcriptional regulator%2C ArsR family PFAM: regulatory protein ArsR~SMART: regulatory protein ArsR~KEGG: bsu:BSU19120 hypothetical protein gene gene4337 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4283 Amir_4284 Amir_4284 Amir_4284 5045568 5047532 + heavy metal translocating P-type ATPase TIGRFAM: heavy metal translocating P-type ATPase%3B ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC%3B cadmium-translocating P-type ATPase~PFAM: E1-E2 ATPase-associated domain protein%3B Haloacid dehalogenase domain protein hydrolase~KEGG: afe:Lferr_0209 heavy metal translocating P- type ATPase gene gene4338 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4284 Amir_4285 Amir_4285 Amir_4285 5047658 5048992 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: smd:Smed_5611 major facilitator superfamily MFS_1 gene gene4339 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4285 Amir_4286 Amir_4286 Amir_4286 5049053 5049409 - transcriptional regulator%2C ArsR family PFAM: regulatory protein ArsR~SMART: regulatory protein ArsR~KEGG: dvm:DvMF_1207 transcriptional regulator%2C ArsR family gene gene4340 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4286 Amir_4287 Amir_4287 Amir_4287 5049602 5050474 + iron permease FTR1 PFAM: iron permease FTR1~KEGG: pde:Pden_1733 iron permease FTR1 gene gene4341 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4287 Amir_4288 Amir_4288 Amir_4288 5050471 5051592 + conserved hypothetical protein KEGG: nmn:NMCC_0036 hypothetical protein gene gene4342 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4288 Amir_4289 Amir_4289 Amir_4289 5051589 5052914 + Dyp-type peroxidase family TIGRFAM: Dyp-type peroxidase family~PFAM: Dyp-type peroxidase~KEGG: bur:Bcep18194_A3951 Dyp-type peroxidase gene gene4343 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4289 Amir_4290 Amir_4290 Amir_4290 5053009 5053407 + transcriptional repressor%2C CopY family PFAM: Penicillinase repressor~KEGG: mxa:MXAN_7319 putative transcriptional regulator gene gene4344 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4290 Amir_4291 Amir_4291 Amir_4291 5053448 5053948 - protein of unknown function DUF1470 PFAM: protein of unknown function DUF1470~KEGG: bbr:BB0827 hypothetical protein gene gene4345 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4291 Amir_4292 Amir_4292 Amir_4292 5054017 5055105 + Epoxide hydrolase domain protein PFAM: Epoxide hydrolase domain protein%3B alpha/beta hydrolase fold~KEGG: bpy:Bphyt_5343 epoxide hydrolase domain protein gene gene4346 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4292 Amir_4293 Amir_4293 Amir_4293 5055248 5056090 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: pde:Pden_3525 ABC transporter related gene gene4347 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4293 Amir_4294 Amir_4294 Amir_4294 5056087 5057181 - transport system permease protein PFAM: transport system permease protein~KEGG: oan:Oant_2825 transport system permease protein gene gene4348 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4294 Amir_4295 Amir_4295 Amir_4295 5057178 5058221 - transport system permease protein PFAM: transport system permease protein~KEGG: oan:Oant_2826 transport system permease protein gene gene4349 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4295 Amir_4296 Amir_4296 Amir_4296 5058218 5059258 - periplasmic binding protein PFAM: periplasmic binding protein~KEGG: pde:Pden_3522 periplasmic binding protein gene gene4350 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4296 Amir_4297 Amir_4297 Amir_4297 5059695 5060801 - peptidase S1 and S6 chymotrypsin/Hap PFAM: peptidase S1 and S6 chymotrypsin/Hap~KEGG: hypothetical protein gene gene4351 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4297 Amir_4298 Amir_4298 Amir_4298 5061303 5062049 - hypothetical protein KEGG: PT repeat family protein gene gene4352 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4298 Amir_4299 Amir_4299 Amir_4299 5062194 5062943 - ANTAR domain protein with unknown sensor PFAM: ANTAR domain protein~KEGG: afw:Anae109_3912 multi-sensor signal transduction histidine kinase gene gene4353 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4299 Amir_4300 Amir_4300 Amir_4300 5063119 5063847 - Orn/Lys/Arg decarboxylase domain protein PFAM: Orn/Lys/Arg decarboxylase domain protein%3B Orn/Lys/Arg decarboxylase major region~KEGG: bha:BH2640 lysine decarboxylase gene gene4354 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4300 Amir_4301 Amir_4301 Amir_4301 5063942 5064727 - transcriptional regulator%2C LuxR family PFAM: regulatory protein LuxR~SMART: regulatory protein LuxR~KEGG: azo:azo0656 LuxR family transcriptional regulator gene gene4355 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4301 Amir_4302 Amir_4302 Amir_4302 5065271 5066116 - protein of unknown function DUF88 PFAM: protein of unknown function DUF88~KEGG: dal:Dalk_1950 cold-shock DNA-binding domain protein gene gene4356 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4302 Amir_4303 Amir_4303 Amir_4303 5066410 5067138 - hypothetical protein KEGG: nmu:Nmul_A2202 hypothetical protein gene gene4357 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4303 Amir_4304 Amir_4304 Amir_4304 5067503 5067772 + pseudogene gene4358 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4304 Amir_4305 Amir_4305 Amir_4305 5067812 5068663 + hypothetical protein gene gene4359 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4305 Amir_4306 Amir_4306 Amir_4306 5068751 5069569 + Rhodanese domain protein PFAM: Rhodanese domain protein~SMART: Rhodanese domain protein~KEGG: scl:sce6912 thiosulfate sulfurtransferase gene gene4360 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4306 Amir_4307 Amir_4307 Amir_4307 5069566 5070909 + FAD linked oxidase domain protein PFAM: FAD linked oxidase domain protein~KEGG: scl:sce0752 putative glycolate oxidase gene gene4361 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4307 Amir_4308 Amir_4308 Amir_4308 5070938 5071699 + hypothetical protein KEGG: reh:H16_A2809 putative peptidase%2C S33 family gene gene4362 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4308 Amir_4309 Amir_4309 Amir_4309 5071806 5074973 + hypothetical protein KEGG: mrd:Mrad2831_1394 WGR domain-containing protein gene gene4363 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4309 Amir_4310 Amir_4310 Amir_4310 5075204 5075815 - flavin reductase domain protein FMN-binding PFAM: flavin reductase domain protein FMN-binding~KEGG: flavoprotein oxidoreductase protein gene gene4364 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4310 Amir_4311 Amir_4311 Amir_4311 5076012 5076908 + transcriptional regulator%2C LysR family PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: rpi:Rpic_3636 transcriptional regulator%2C LysR family gene gene4365 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4311 Amir_4312 Amir_4312 Amir_4312 5077001 5078215 + Alkanesulfonate monooxygenase PFAM: Luciferase-like monooxygenase~KEGG: ssuD%3B alkanesulfonate monooxygenase protein gene gene4366 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4312 Amir_4313 Amir_4313 Amir_4313 5078230 5079423 + acyl-CoA dehydrogenase type 2 domain protein PFAM: Acyl-CoA dehydrogenase type 2 domain%3B acyl- CoA dehydrogenase domain protein~KEGG: bja:bll6452 acyl-CoA dehydrogenase gene gene4367 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4313 Amir_4314 Amir_4314 Amir_4314 5079547 5079645 + hypothetical protein gene gene4368 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4314 Amir_4315 Amir_4315 Amir_4315 5079706 5080404 - ThiJ/PfpI domain protein PFAM: ThiJ/PfpI domain protein~KEGG: scl:sce8831 putative ThiJ/PfpI family protein gene gene4369 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4315 Amir_4316 Amir_4316 Amir_4316 5080501 5081463 + transcriptional regulator%2C AraC family PFAM: ThiJ/PfpI domain protein%3B helix-turn-helix- domain containing protein AraC type~SMART: helix-turn-helix- domain containing protein AraC type~KEGG: scl:sce6302 AraC family transcriptional regulator gene gene4370 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4316 Amir_4317 Amir_4317 Amir_4317 5081610 5082605 + transcriptional regulator%2C AraC family PFAM: helix-turn-helix- domain containing protein AraC type~SMART: helix-turn-helix- domain containing protein AraC type~KEGG: reh:H16_A3489 transcriptional regulator%2C AraC- family gene gene4371 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4317 Amir_4318 Amir_4318 Amir_4318 5082678 5082968 - hypothetical protein gene gene4372 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4318 Amir_4319 Amir_4319 Amir_4319 5083040 5085312 - pseudogene gene4373 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4319 Amir_4320 Amir_4320 Amir_4320 5085486 5087150 + extracellular solute-binding protein family 5 PFAM: extracellular solute-binding protein family 5~KEGG: bbt:BBta_4832 putative ABC transporter (substrate binding protein) gene gene4374 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4320 Amir_4321 Amir_4321 Amir_4321 5087147 5088118 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: bbt:BBta_4833 putative ABC transporter (permease protein) gene gene4375 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4321 Amir_4322 Amir_4322 Amir_4322 5088115 5088957 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: bbt:BBta_4834 putative ABC transporter (permease protein) gene gene4376 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4322 Amir_4323 Amir_4323 Amir_4323 5088936 5090579 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: peptide ABC transporter gene gene4377 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4323 Amir_4324 Amir_4324 Amir_4324 5090720 5092030 + conserved repeat domain protein TIGRFAM: conserved repeat domain protein~PFAM: Cna B domain protein~KEGG: gme:Gmet_2043 hypothetical protein gene gene4378 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4324 Amir_4325 Amir_4325 Amir_4325 5092080 5092490 - hypothetical protein gene gene4379 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4325 Amir_4326 Amir_4326 Amir_4326 5092777 5093160 - conserved hypothetical protein KEGG: hypothetical protein gene gene4380 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4326 Amir_4327 Amir_4327 Amir_4327 5093325 5093834 - hypothetical protein gene gene4381 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4327 Amir_4328 Amir_4328 Amir_4328 5094141 5094656 - hypothetical protein KEGG: scl:sce0948 hypothetical protein gene gene4382 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4328 Amir_4329 Amir_4329 Amir_4329 5094764 5095636 + transcriptional regulator%2C XRE family SMART: helix-turn-helix domain protein~KEGG: bra:BRADO4150 hypothetical protein gene gene4383 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4329 Amir_4330 Amir_4330 Amir_4330 5095709 5096992 + hypothetical protein KEGG: scl:sce8953 hypothetical protein gene gene4384 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4330 Amir_4331 Amir_4331 Amir_4331 5097047 5098291 - glycoside hydrolase family 46 PFAM: glycoside hydrolase family 46%3B Ricin B lectin~SMART: Ricin B lectin~KEGG: bsu:BSU26890 chitosanase gene gene4385 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4331 Amir_4332 Amir_4332 Amir_4332 5098585 5099019 + response regulator receiver protein PFAM: response regulator receiver~SMART: response regulator receiver~KEGG: dvm:DvMF_2540 response regulator receiver protein gene gene4386 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4332 Amir_4333 Amir_4333 Amir_4333 5099183 5100976 + fumarate reductase/succinate dehydrogenase flavoprotein domain protein PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein~KEGG: oxidoreductase protein%3B K07077 gene gene4387 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4333 Amir_4334 Amir_4334 Amir_4334 5100984 5101750 - pseudogene gene4388 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4334 Amir_4335 Amir_4335 Amir_4335 5102067 5102588 - transcriptional regulator%2C AsnC family PFAM: regulatory protein AsnC/Lrp family~SMART: regulatory protein AsnC/Lrp family~KEGG: aha:AHA_0491 AsnC family transcriptional regulator gene gene4389 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4335 Amir_4336 Amir_4336 Amir_4336 5102644 5102913 - hypothetical protein gene gene4390 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4336 Amir_4337 Amir_4337 Amir_4337 5103039 5103926 - Integral membrane protein TerC PFAM: Integral membrane protein TerC~KEGG: integral membrane protein TerC gene gene4391 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4337 Amir_4338 Amir_4338 Amir_4338 5104555 5105250 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: nha:Nham_3206 TetR family transcriptional regulator gene gene4392 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4338 Amir_4339 Amir_4339 Amir_4339 5105234 5106538 - monooxygenase FAD-binding PFAM: monooxygenase FAD-binding%3B FAD dependent oxidoreductase~KEGG: sme:SMc02891 putative oxidoreductase transmembrane protein gene gene4393 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4339 Amir_4340 Amir_4340 Amir_4340 5106593 5107792 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: spe:Spro_3850 major facilitator transporter gene gene4394 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4340 Amir_4341 Amir_4341 Amir_4341 5107865 5108902 - hypothetical protein KEGG: met:M446_2055 methyl-accepting chemotaxis sensory transducer gene gene4395 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4341 Amir_4342 Amir_4342 Amir_4342 5109178 5110428 + sodium/hydrogen exchanger PFAM: sodium/hydrogen exchanger~KEGG: mxa:MXAN_0260 putative cation transporter/universal stress family protein gene gene4396 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4342 Amir_4343 Amir_4343 Amir_4343 5110473 5110838 - hypothetical protein KEGG: ade:Adeh_2705 response regulator receiver gene gene4397 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4343 Amir_4344 Amir_4344 Amir_4344 5110835 5112637 - hypothetical protein gene gene4398 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4344 Amir_4345 Amir_4345 Amir_4345 5112684 5113904 - drug resistance transporter%2C Bcr/CflA subfamily TIGRFAM: drug resistance transporter%2C Bcr/CflA subfamily~PFAM: major facilitator superfamily MFS_1~KEGG: bcb:BCB4264_A0206 drug resistance transporter%2C Bcr/CflA family gene gene4399 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4345 Amir_4346 Amir_4346 Amir_4346 5113941 5114384 + transcriptional regulator%2C MarR family PFAM: regulatory protein MarR~SMART: regulatory protein MarR~KEGG: dac:Daci_5402 transcriptional regulator%2C TrmB gene gene4400 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4346 Amir_4347 Amir_4347 Amir_4347 5114391 5117417 - putative signal transduction protein with Nacht domain SMART: AAA ATPase~KEGG: scl:sce3623 hypothetical protein gene gene4401 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4347 Amir_4348 Amir_4348 Amir_4348 5117476 5117958 - transcriptional regulator%2C AsnC family PFAM: regulatory protein AsnC/Lrp family~SMART: regulatory protein AsnC/Lrp family~KEGG: rru:Rru_A3685 AsnC family transcriptional regulator gene gene4402 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4348 Amir_4349 Amir_4349 Amir_4349 5118087 5118695 + protein of unknown function DUF161 PFAM: protein of unknown function DUF161~KEGG: rpi:Rpic_4668 protein of unknown function DUF161 gene gene4403 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4349 Amir_4350 Amir_4350 Amir_4350 5118772 5121582 - hypothetical protein KEGG: nha:Nham_0826 hypothetical protein gene gene4404 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4350 Amir_4351 Amir_4351 Amir_4351 5121845 5122534 + two component transcriptional regulator%2C winged helix family PFAM: response regulator receiver%3B transcriptional regulator domain protein~SMART: response regulator receiver~KEGG: bxe:Bxe_A0699 two component transcriptional regulator gene gene4405 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4351 Amir_4352 Amir_4352 Amir_4352 5122531 5123862 + histidine kinase PFAM: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein~KEGG: ade:Adeh_2943 histidine kinase gene gene4406 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4352 Amir_4353 Amir_4353 Amir_4353 5123917 5125440 - Histidine ammonia-lyase PFAM: phenylalanine/histidine ammonia-lyase~KEGG: rsh:Rsph17029_1579 histidine ammonia-lyase gene gene4407 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4353 Amir_4354 Amir_4354 Amir_4354 5125504 5127054 + FAD-dependent pyridine nucleotide-disulphide oxidoreductase PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase%3B FAD dependent oxidoreductase~KEGG: RCJMB04_10a6%2C FOXRED2%3B FAD-dependent oxidoreductase domain containing 2 gene gene4408 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4354 Amir_4355 Amir_4355 Amir_4355 5127047 5128474 + AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: vei:Veis_4674 acyl-CoA synthetase gene gene4409 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4355 Amir_4356 Amir_4356 Amir_4356 5128550 5138752 - KR domain protein PFAM: KR domain protein%3B Beta-ketoacyl synthase%3B Acyl transferase%3B Erythronolide synthase docking%3B short- chain dehydrogenase/reductase SDR%3B phosphopantetheine- binding~KEGG: mxa:MXAN_4527 polyketide synthase gene gene4410 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4356 Amir_4357 Amir_4357 Amir_4357 5138804 5141272 - Beta-ketoacyl synthase PFAM: Beta-ketoacyl synthase~KEGG: eca:ECA0603 type I polyketide synthase gene gene4411 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4357 Amir_4358 Amir_4358 Amir_4358 5141269 5142612 - monooxygenase FAD-binding PFAM: monooxygenase FAD-binding%3B FAD dependent oxidoreductase~KEGG: scl:sce4847 hypothetical protein gene gene4412 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4358 Amir_4359 Amir_4359 Amir_4359 5142609 5152235 - Acyl transferase PFAM: Acyl transferase%3B KR domain protein%3B Beta- ketoacyl synthase%3B short-chain dehydrogenase/reductase SDR%3B NAD-dependent epimerase/dehydratase%3B phosphopantetheine-binding~KEGG: mxa:MXAN_4527 polyketide synthase gene gene4413 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4359 Amir_4360 Amir_4360 Amir_4360 5152509 5153840 - glycosyl transferase family 28 PFAM: glycosyl transferase family 28~KEGG: ses:SARI_00205 hypothetical protein gene gene4414 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4360 Amir_4361 Amir_4361 Amir_4361 5153954 5155189 - protein of unknown function DUF1205 PFAM: protein of unknown function DUF1205%3B glycosyl transferase family 28~KEGG: ses:SARI_00205 hypothetical protein gene gene4415 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4361 Amir_4362 Amir_4362 Amir_4362 5155490 5156230 + Methyltransferase type 11 PFAM: Methyltransferase type 11%3B Methyltransferase type 12~KEGG: glo:Glov_3377 methyltransferase type 11 gene gene4416 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4362 Amir_4363 Amir_4363 Amir_4363 5156329 5156628 - hypothetical protein gene gene4417 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4363 Amir_4364 Amir_4364 Amir_4364 5156751 5157229 - pseudogene gene4418 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4364 Amir_4365 Amir_4365 Amir_4365 5157238 5157515 - pseudogene gene4419 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4365 Amir_4366 Amir_4366 Amir_4366 5157612 5158619 + hypothetical protein KEGG: afw:Anae109_1986 extracellular HAF gene gene4420 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4366 Amir_4367 Amir_4367 Amir_4367 5158663 5159640 - 2-nitropropane dioxygenase NPD PFAM: 2-nitropropane dioxygenase NPD~KEGG: rpt:Rpal_2151 2-nitropropane dioxygenase NPD gene gene4421 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4367 Amir_4368 Amir_4368 Amir_4368 5159653 5160795 - acyl-CoA dehydrogenase domain protein PFAM: acyl-CoA dehydrogenase domain protein%3B Acyl- CoA dehydrogenase type 2 domain~KEGG: IVD%3B IVD (ISOVALERYL-COA-DEHYDROGENASE)%3B K00253 isovaleryl-CoA dehydrogenase gene gene4422 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4368 Amir_4369 Amir_4369 Amir_4369 5160829 5161449 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: rpd:RPD_4359 regulatory protein%2C TetR gene gene4423 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4369 Amir_4370 Amir_4370 Amir_4370 5161497 5163302 - AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: scl:sce8696 putative long-chain fatty-acid-- CoA ligase gene gene4424 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4370 Amir_4371 Amir_4371 Amir_4371 5163548 5164756 + acetyl-CoA acetyltransferase KEGG: mxa:MXAN_6988 acetyl-CoA acetyltransferase~TIGRFAM: acetyl-CoA acetyltransferase~PFAM: Thiolase gene gene4425 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4371 Amir_4372 Amir_4372 Amir_4372 5164804 5166969 + 3-hydroxyacyl-CoA dehydrogenase NAD-binding PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding%3B Enoyl-CoA hydratase/isomerase%3B 3-hydroxyacyl-CoA dehydrogenase domain protein~KEGG: mxa:MXAN_6987 fatty oxidation complex%2C alpha subunit gene gene4426 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4372 Amir_4373 Amir_4373 Amir_4373 5166988 5167677 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: sme:SMa2387 transcriptional regulator%2C TetR family gene gene4427 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4373 Amir_4374 Amir_4374 Amir_4374 5167841 5169070 + hypothetical protein KEGG: scl:sce5500 hypothetical protein gene gene4428 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4374 Amir_4375 Amir_4375 Amir_4375 5169108 5170355 + hypothetical protein KEGG: scl:sce5500 hypothetical protein gene gene4429 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4375 Amir_4376 Amir_4376 Amir_4376 5170367 5172715 + aldehyde oxidase and xanthine dehydrogenase molybdopterin binding PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding~KEGG: mxa:MXAN_1752 isoquinoline 1-oxidoreductase%2C beta subunit gene gene4430 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4376 Amir_4377 Amir_4377 Amir_4377 5172860 5173363 + (2Fe-2S)-binding domain protein PFAM: [2Fe-2S]-binding domain protein%3B ferredoxin~KEGG: mxa:MXAN_1751 isoquinoline 1-oxidoreductase%2C alpha subunit gene gene4431 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4377 Amir_4378 Amir_4378 Amir_4378 5173421 5174149 - transcriptional regulator%2C MerR family PFAM: regulatory protein MerR~SMART: regulatory protein MerR~KEGG: atc:AGR_pAT_269 hypothetical protein gene gene4432 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4378 Amir_4379 Amir_4379 Amir_4379 5175087 5176760 + Polyprenyl synthetase PFAM: Polyprenyl synthetase~KEGG: hne:HNE_0678 polyprenyl synthetase gene gene4433 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4379 Amir_4380 Amir_4380 Amir_4380 5176760 5177743 + UbiA prenyltransferase PFAM: UbiA prenyltransferase~KEGG: bbt:BBta_6422 bacteriochlorophyll/chlorophyll a synthase gene gene4434 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4380 Amir_4381 Amir_4381 Amir_4381 5177850 5179103 + monooxygenase FAD-binding PFAM: monooxygenase FAD-binding%3B glucose-inhibited division protein A%3B FAD dependent oxidoreductase~KEGG: bmn:BMA10247_A1734 putative monooxygenase gene gene4435 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4381 Amir_4382 Amir_4382 Amir_4382 5179112 5180104 - O-methyltransferase family 2 PFAM: O-methyltransferase family 2~KEGG: sus:Acid_5654 hydroxyneurosporene-O- methyltransferase gene gene4436 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4382 Amir_4383 Amir_4383 Amir_4383 5180272 5181117 + Taurine dioxygenase PFAM: Taurine catabolism dioxygenase TauD/TfdA~KEGG: pla:Plav_2004 taurine dioxygenase gene gene4437 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4383 Amir_4384 Amir_4384 Amir_4384 5181213 5182415 - cytochrome P450 PFAM: cytochrome P450~KEGG: bca:BCE_2654 cytochrome P450 gene gene4438 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4384 Amir_4385 Amir_4385 Amir_4385 5182451 5184133 - Prenyltransferase/squalene oxidase PFAM: Prenyltransferase/squalene oxidase~KEGG: afw:Anae109_4079 squalene-hopene cyclase gene gene4439 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4385 Amir_4386 Amir_4386 Amir_4386 5184380 5185381 - aminotransferase class I and II PFAM: aminotransferase class I and II~KEGG: scl:sce8915 histidinol-phosphate transaminase gene gene4440 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4386 Amir_4387 Amir_4387 Amir_4387 5185962 5187251 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: floR%3B florfenicol/chloramphenicol resistance transporter protein gene gene4441 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4387 Amir_4388 Amir_4388 Amir_4388 5187352 5187795 + hypothetical protein KEGG: dal:Dalk_2807 hypothetical protein gene gene4442 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4388 Amir_4389 Amir_4389 Amir_4389 5187921 5189153 - hypothetical protein KEGG: mxa:MXAN_1195 hypothetical protein gene gene4443 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4389 Amir_4390 Amir_4390 Amir_4390 5189293 5190555 - peptidase S26B%2C signal peptidase KEGG: bcz:BCZK1172 signal peptidase I~TIGRFAM: peptidase S26B%2C signal peptidase~PFAM: peptidase S24 and S26 domain protein~SMART: LamG domain protein jellyroll fold domain protein gene gene4444 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4390 Amir_4391 Amir_4391 Amir_4391 5190552 5191169 - hypothetical protein KEGG: MUC1.3%3B hypothetical protein%2C likely cell wall localized and GPI-anchored mucin like gene gene4445 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4391 Amir_4392 Amir_4392 Amir_4392 5191394 5191936 + SCP-like extracellular PFAM: SCP-like extracellular~KEGG: noc:Noc_1373 hypothetical protein gene gene4446 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4392 Amir_4393 Amir_4393 Amir_4393 5192055 5192795 - transcriptional regulator%2C AraC family PFAM: helix-turn-helix- domain containing protein AraC type~SMART: helix-turn-helix- domain containing protein AraC type~KEGG: scl:sce6740 AraC family transcriptional regulator gene gene4447 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4393 Amir_4394 Amir_4394 Amir_4394 5192871 5193431 + hypothetical protein gene gene4448 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4394 Amir_4395 Amir_4395 Amir_4395 5193446 5194036 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: mex:Mext_4360 regulatory protein TetR gene gene4449 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4395 Amir_4396 Amir_4396 Amir_4396 5194084 5194773 - ThiJ/PfpI domain protein PFAM: ThiJ/PfpI domain protein~KEGG: reu:Reut_A0026 ThiJ/PfpI gene gene4450 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4396 Amir_4397 Amir_4397 Amir_4397 5194910 5195308 - hypothetical protein gene gene4451 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4397 Amir_4398 Amir_4398 Amir_4398 5195346 5196095 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B KR domain protein%3B NAD-dependent epimerase/dehydratase~KEGG: esa:ESA_01962 hypothetical protein gene gene4452 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4398 Amir_4399 Amir_4399 Amir_4399 5196187 5196789 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: afw:Anae109_3254 TetR family transcriptional regulator gene gene4453 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4399 Amir_4400 Amir_4400 Amir_4400 5196863 5197774 + transcriptional regulator%2C MerR family PFAM: regulatory protein MerR%3B Transcription regulator MerR DNA binding~SMART: regulatory protein MerR~KEGG: har:HEAR1617 transcriptional regulator (CadR) gene gene4454 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4400 Amir_4401 Amir_4401 Amir_4401 5197875 5198509 - pseudogene gene4455 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4401 Amir_4402 Amir_4402 Amir_4402 5198601 5199272 - transcriptional regulator%2C GntR family PFAM: GntR domain protein%3B regulatory protein GntR HTH~SMART: regulatory protein GntR HTH~KEGG: mes:Meso_2933 transcriptional regulator%2C GntR family gene gene4456 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4402 Amir_4403 Amir_4403 Amir_4403 5199382 5199906 + PEBP family protein PFAM: PEBP family protein~KEGG: PEBP family protein gene gene4457 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4403 Amir_4404 Amir_4404 Amir_4404 5200156 5203194 - conserved hypothetical protein KEGG: bur:Bcep18194_B1559 hypothetical protein gene gene4458 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4404 Amir_4405 Amir_4405 Amir_4405 5203586 5204890 + transcriptional regulator%2C AraC family PFAM: helix-turn-helix- domain containing protein AraC type~SMART: helix-turn-helix- domain containing protein AraC type~KEGG: reh:H16_A3378 transcriptional regulator%2C AraC- family gene gene4459 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4405 Amir_4406 Amir_4406 Amir_4406 5204955 5205131 + hypothetical protein gene gene4460 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4406 Amir_4407 Amir_4407 Amir_4407 5205155 5205538 + anti-sigma-factor antagonist TIGRFAM: anti-anti-sigma factor~PFAM: Sulfate transporter/antisigma-factor antagonist STAS~KEGG: swi:Swit_1492 anti-sigma-factor antagonist gene gene4461 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4407 Amir_4408 Amir_4408 Amir_4408 5205764 5206945 + glycosyl transferase group 1 PFAM: glycosyl transferase group 1~KEGG: cti:RALTA_A0583 putative glycosyl transferase%2C group 1 gene gene4462 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4408 Amir_4409 Amir_4409 Amir_4409 5206949 5207920 - Mn2+dependent serine/threonine protein kinase KEGG: lpc:LPC_2297 hypothetical protein gene gene4463 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4409 Amir_4410 Amir_4410 Amir_4410 5207956 5208474 - hypothetical protein KEGG: nar:Saro_3607 short-chain dehydrogenase/reductase SDR gene gene4464 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4410 Amir_4411 Amir_4411 Amir_4411 5208585 5209697 - pseudogene gene4465 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4411 Amir_4412 Amir_4412 Amir_4412 5210003 5210428 + hypothetical protein gene gene4466 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4412 Amir_4413 Amir_4413 Amir_4413 5210512 5210955 + ferric uptake regulator%2C Fur family PFAM: ferric-uptake regulator~KEGG: afw:Anae109_2251 ferric uptake regulator family protein gene gene4467 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4413 Amir_4414 Amir_4414 Amir_4414 5211027 5211188 - ribosomal protein L32 TIGRFAM: ribosomal protein L32~PFAM: ribosomal L32p protein gene gene4468 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4414 Amir_4415 Amir_4415 Amir_4415 5211188 5211439 - ribosomal protein L31 TIGRFAM: ribosomal protein L31~PFAM: ribosomal protein L31~KEGG: bha:BH3780 50S ribosomal protein L31 type B gene gene4469 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4415 Amir_4416 Amir_4416 Amir_4416 5211436 5212527 - cobalamin synthesis CobW domain protein PFAM: cobalamin synthesis CobW domain protein~KEGG: bxe:Bxe_A4503 putative cobalamin synthesis protein/P47K gene gene4470 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4416 Amir_4417 Amir_4417 Amir_4417 5212657 5214129 - Catalase PFAM: Catalase domain protein~KEGG: ppd:Ppro_1932 catalase gene gene4471 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4417 Amir_4418 Amir_4418 Amir_4418 5214277 5214951 + glutamine amidotransferase class-I PFAM: glutamine amidotransferase class-I~KEGG: rpi:Rpic_0998 glutamine amidotransferase class-I gene gene4472 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4418 Amir_4419 Amir_4419 Amir_4419 5214948 5215637 + MOSC domain containing protein PFAM: MOSC domain containing protein~KEGG: rsh:Rsph17029_0572 MOSC domain-containing protein gene gene4473 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4419 Amir_4420 Amir_4420 Amir_4420 5215696 5216241 + uncharacterized peroxidase-related enzyme TIGRFAM: uncharacterized peroxidase-related enzyme%3B alkylhydroperoxidase like protein%2C AhpD family~PFAM: Carboxymuconolactone decarboxylase~KEGG: oca:OCAR_6549 MIP gene gene4474 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4420 Amir_4421 Amir_4421 Amir_4421 5216389 5216982 + transcriptional regulator%2C MarR family PFAM: regulatory protein MarR~SMART: regulatory protein MarR~KEGG: oca:OCAR_6548 transcriptional regulator%2C MarR family gene gene4475 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4421 Amir_4422 Amir_4422 Amir_4422 5216993 5217976 - transcriptional regulator%2C AraC family PFAM: helix-turn-helix- domain containing protein AraC type~SMART: helix-turn-helix- domain containing protein AraC type~KEGG: reh:H16_B0937 transcriptional regulator%2C AraC- family gene gene4476 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4422 Amir_4423 Amir_4423 Amir_4423 5218113 5219024 + Alcohol dehydrogenase zinc-binding domain protein PFAM: Alcohol dehydrogenase zinc-binding domain protein%3B Alcohol dehydrogenase GroES domain protein~KEGG: mlo:mlr3236 oxidoreductase gene gene4477 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4423 Amir_4424 Amir_4424 Amir_4424 5219040 5220053 - transcriptional regulator%2C AraC family PFAM: helix-turn-helix- domain containing protein AraC type~SMART: helix-turn-helix- domain containing protein AraC type~KEGG: cti:RALTA_B0761 putative transcriptional regulator%2C AraC family gene gene4478 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4424 Amir_4425 Amir_4425 Amir_4425 5220181 5221089 + Alcohol dehydrogenase zinc-binding domain protein PFAM: Alcohol dehydrogenase zinc-binding domain protein%3B Alcohol dehydrogenase GroES domain protein~KEGG: mlo:mlr3236 oxidoreductase gene gene4479 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4425 Amir_4426 Amir_4426 Amir_4426 5221124 5222218 - protein serine/threonine phosphatase PFAM: Protein phosphatase 2C-like~SMART: protein phosphatase 2C domain protein~KEGG: cti:RALTA_A2171 putative serine/threonine protein phosphatase%2C P2C family gene gene4480 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4426 Amir_4427 Amir_4427 Amir_4427 5222748 5222951 + pseudogene gene4481 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4427 Amir_4428 Amir_4428 Amir_4428 5223000 5223938 - NmrA family protein PFAM: NmrA family protein~KEGG: mxa:MXAN_7053 NmrA-like family protein gene gene4482 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4428 Amir_4429 Amir_4429 Amir_4429 5224106 5224996 + transcriptional regulator%2C LysR family PFAM: regulatory protein LysR%3B LysR substrate- binding~KEGG: scl:sce1423 LysR family transcriptional regulator gene gene4483 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4429 Amir_4430 Amir_4430 Amir_4430 5225142 5225579 + Stress responsive alpha-beta barrel domain protein PFAM: Stress responsive alpha-beta barrel domain protein gene gene4484 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4430 Amir_4431 Amir_4431 Amir_4431 5225576 5226634 + Alcohol dehydrogenase zinc-binding domain protein PFAM: Alcohol dehydrogenase zinc-binding domain protein%3B Alcohol dehydrogenase GroES domain protein~KEGG: ccs:CCNA_02209 quinone oxidoreductase gene gene4485 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4431 Amir_4432 Amir_4432 Amir_4432 5226631 5227197 + hypothetical protein gene gene4486 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4432 Amir_4433 Amir_4433 Amir_4433 5227194 5227841 - two component transcriptional regulator%2C LuxR family PFAM: response regulator receiver%3B regulatory protein LuxR~SMART: response regulator receiver%3B regulatory protein LuxR~KEGG: scl:sce5431 two-component system response regulator gene gene4487 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4433 Amir_4434 Amir_4434 Amir_4434 5227838 5228947 - histidine kinase PFAM: histidine kinase dimerization and phosphoacceptor region%3B ATP-binding region ATPase domain protein~KEGG: gdi:GDI1194 putative two-component system sensor protein gene gene4488 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4434 Amir_4435 Amir_4435 Amir_4435 5229068 5229256 + HIT family hydrolase KEGG: bcr:BCAH187_A2835 HIT family hydrolase gene gene4489 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4435 Amir_4436 Amir_4436 Amir_4436 5229934 5231376 + amine oxidase PFAM: amine oxidase%3B FAD dependent oxidoreductase~KEGG: reh:H16_A0856 L-amino-acid oxidase gene gene4490 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4436 Amir_4437 Amir_4437 Amir_4437 5231562 5232446 - ABC-3 protein PFAM: ABC-3 protein~KEGG: rpb:RPB_3405 hypothetical protein gene gene4491 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4437 Amir_4438 Amir_4438 Amir_4438 5232443 5233183 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: plu:plu2673 iron transport system ATP-binding protein YfeB gene gene4492 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4438 Amir_4439 Amir_4439 Amir_4439 5233180 5234094 - periplasmic solute binding protein PFAM: periplasmic solute binding protein~KEGG: rsq:Rsph17025_0249 periplasmic solute binding protein gene gene4493 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4439 Amir_4440 Amir_4440 Amir_4440 5234581 5240904 - thioester reductase domain protein TIGRFAM: thioester reductase domain protein~PFAM: short-chain dehydrogenase/reductase SDR%3B Beta- ketoacyl synthase%3B Male sterility domain%3B KR domain protein%3B Acyl transferase%3B Erythronolide synthase docking%3B phosphopantetheine-binding%3B NAD-dependent epimerase/dehydratase~KEGG: eca:ECA0602 type I polyketide synthase gene gene4494 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4440 Amir_4441 Amir_4441 Amir_4441 5240932 5249832 - Acyl transferase PFAM: Acyl transferase%3B short-chain dehydrogenase/reductase SDR%3B Beta-ketoacyl synthase%3B KR domain protein%3B Erythronolide synthase docking%3B phosphopantetheine-binding~KEGG: mxa:MXAN_4527 polyketide synthase gene gene4495 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4441 Amir_4442 Amir_4442 Amir_4442 5249837 5260849 - Acyl transferase PFAM: Acyl transferase%3B short-chain dehydrogenase/reductase SDR%3B Beta-ketoacyl synthase%3B KR domain protein%3B Erythronolide synthase docking%3B NAD- dependent epimerase/dehydratase%3B phosphopantetheine- binding~KEGG: mxa:MXAN_4527 polyketide synthase gene gene4496 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4442 Amir_4443 Amir_4443 Amir_4443 5260871 5269414 - Acyl transferase PFAM: Acyl transferase%3B short-chain dehydrogenase/reductase SDR%3B Beta-ketoacyl synthase%3B KR domain protein%3B NAD-dependent epimerase/dehydratase%3B phosphopantetheine-binding~KEGG: eca:ECA0602 type I polyketide synthase gene gene4497 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4443 Amir_4444 Amir_4444 Amir_4444 5269440 5270756 - putative transcriptional regulator%2C PucR family KEGG: bur:Bcep18194_C6844 putative regulator of polyketide synthase expression gene gene4498 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4444 Amir_4445 Amir_4445 Amir_4445 5270766 5272331 - aminotransferase class-III PFAM: aminotransferase class-III~KEGG: ppu:PP_2782 pyridoxalphosphate dependent aminotransferase%2C class III gene gene4499 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4445 Amir_4446 Amir_4446 Amir_4446 5272505 5272870 + conserved hypothetical protein KEGG: pap:PSPA7_2619 hypothetical protein gene gene4500 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4446 Amir_4447 Amir_4447 Amir_4447 5272944 5274140 - acyl-CoA dehydrogenase type 2 domain protein PFAM: Acyl-CoA dehydrogenase type 2 domain%3B acyl- CoA dehydrogenase domain protein~KEGG: pol:Bpro_2060 acyl-CoA dehydrogenase%2C C- terminal type2 gene gene4501 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4447 Amir_4448 Amir_4448 Amir_4448 5274353 5274850 + flavin reductase domain protein FMN-binding PFAM: flavin reductase domain protein FMN-binding~KEGG: nar:Saro_1462 flavin reductase-like%2C FMN- binding gene gene4502 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4448 Amir_4449 Amir_4449 Amir_4449 5274895 5275356 - hypothetical protein gene gene4503 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4449 Amir_4450 Amir_4450 Amir_4450 5275360 5276322 - ribonucleotide reductase PFAM: ribonucleotide reductase~KEGG: bba:Bd1983 ribonucleotide-diphosphate reductase small chain gene gene4504 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4450 Amir_4451 Amir_4451 Amir_4451 5276414 5277214 - transcriptional regulator%2C SARP family PFAM: transcriptional activator domain%3B transcriptional regulator domain protein~KEGG: ade:Adeh_3289 SARP family transcriptional regulator gene gene4505 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4451 Amir_4452 Amir_4452 Amir_4452 5277705 5278862 - transcriptional regulator%2C LuxR family SMART: regulatory protein LuxR~KEGG: nha:Nham_1032 LuxR family transcriptional regulator gene gene4506 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4452 Amir_4453 Amir_4453 Amir_4453 5279469 5280800 - amine oxidase PFAM: amine oxidase%3B FAD dependent oxidoreductase~KEGG: reh:H16_A0856 L-amino-acid oxidase gene gene4507 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4453 Amir_4454 Amir_4454 Amir_4454 5281007 5281852 - NmrA family protein PFAM: NmrA family protein%3B NAD-dependent epimerase/dehydratase%3B dTDP-4-dehydrorhamnose reductase~KEGG: rpd:RPD_2341 NmrA-like gene gene4508 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4454 Amir_4455 Amir_4455 Amir_4455 5281933 5282892 + transcriptional regulator%2C AraC family PFAM: helix-turn-helix- domain containing protein AraC type~SMART: helix-turn-helix- domain containing protein AraC type~KEGG: mno:Mnod_1588 transcriptional regulator%2C AraC family gene gene4509 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4455 Amir_4456 Amir_4456 Amir_4456 5282988 5283743 - protein of unknown function DUF81 PFAM: protein of unknown function DUF81~KEGG: sfu:Sfum_1521 protein of unknown function DUF81 gene gene4510 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4456 Amir_4457 Amir_4457 Amir_4457 5284250 5284561 + hypothetical protein gene gene4511 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4457 Amir_4458 Amir_4458 Amir_4458 5284569 5285387 - transcriptional regulator%2C XRE family SMART: helix-turn-helix domain protein~KEGG: acr:Acry_0313 XRE family transcriptional regulator gene gene4512 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4458 Amir_4459 Amir_4459 Amir_4459 5285392 5286303 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: xcv:XCV0256 short chain dehydrogenase gene gene4513 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4459 Amir_4460 Amir_4460 Amir_4460 5286406 5286870 - conserved hypothetical protein KEGG: bbt:BBta_5025 hypothetical protein gene gene4514 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4460 Amir_4461 Amir_4461 Amir_4461 5286867 5287418 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: bcz:BCZK4730 TetR family transcriptional regulator gene gene4515 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4461 Amir_4462 Amir_4462 Amir_4462 5287411 5288244 - alpha/beta hydrolase fold protein PFAM: alpha/beta hydrolase fold~KEGG: hypothetical protein gene gene4516 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4462 Amir_4463 Amir_4463 Amir_4463 5288447 5289106 + NADP oxidoreductase coenzyme F420-dependent PFAM: NADP oxidoreductase coenzyme F420-dependent%3B 6-phosphogluconate dehydrogenase NAD-binding~KEGG: afw:Anae109_2808 NADP oxidoreductase coenzyme F420-dependent gene gene4517 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4463 Amir_4464 Amir_4464 Amir_4464 5289116 5289682 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: atc:AGR_pAT_729 hypothetical protein gene gene4518 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4464 Amir_4465 Amir_4465 Amir_4465 5290060 5292159 - Oxidoreductase FAD-binding domain protein PFAM: Oxidoreductase FAD-binding domain protein%3B pyridoxamine 5'-phosphate oxidase-related FMN-binding%3B ferredoxin%3B oxidoreductase FAD/NAD(P)-binding domain protein~KEGG: scl:sce7711 hypothetical protein gene gene4519 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4465 Amir_4466 Amir_4466 Amir_4466 5292246 5292860 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: pla:Plav_1079 TetR family transcriptional regulator gene gene4520 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4466 Amir_4467 Amir_4467 Amir_4467 5293004 5293729 + hypothetical protein KEGG: scl:sce9100 hypothetical protein gene gene4521 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4467 Amir_4468 Amir_4468 Amir_4468 5293797 5295590 - AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: afw:Anae109_0968 AMP-dependent synthetase and ligase gene gene4522 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4468 Amir_4469 Amir_4469 Amir_4469 5295830 5296171 + hyphally regulated cell wall protein HYR1p-like protein KEGG: similar to hyphally regulated cell wall protein HYR1p gene gene4523 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4469 Amir_4470 Amir_4470 Amir_4470 5296310 5296441 + hypothetical protein gene gene4524 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4470 Amir_4471 Amir_4471 Amir_4471 5296524 5296820 - Antibiotic biosynthesis monooxygenase PFAM: Antibiotic biosynthesis monooxygenase~KEGG: jan:Jann_1295 antibiotic biosynthesis monooxygenase gene gene4525 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4471 Amir_4472 Amir_4472 Amir_4472 5296902 5297519 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: xau:Xaut_2611 TetR family transcriptional regulator gene gene4526 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4472 Amir_4473 Amir_4473 Amir_4473 5297612 5298289 + nitroreductase PFAM: nitroreductase~KEGG: pla:Plav_2473 nitroreductase gene gene4527 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4473 Amir_4474 Amir_4474 Amir_4474 5298302 5298985 - hypothetical protein gene gene4528 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4474 Amir_4475 Amir_4475 Amir_4475 5299045 5300217 - hypothetical protein KEGG: rle:RL4432 hypothetical protein gene gene4529 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4475 Amir_4476 Amir_4476 Amir_4476 5300312 5300882 + pseudogene gene4530 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4476 Amir_4477 Amir_4477 Amir_4477 5301065 5302810 - serine/threonine protein kinase PFAM: Serine/threonine protein kinase-related%3B tyrosine protein kinase~SMART: serine/threonine protein kinase%3B tyrosine protein kinase~KEGG: pap:PSPA7_0145 serine/threonine protein kinase PpkA gene gene4531 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4477 Amir_4478 Amir_4478 Amir_4478 5303200 5304148 + pseudogene gene4532 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4478 Amir_4479 Amir_4479 Amir_4479 5304179 5305330 + Alcohol dehydrogenase GroES domain protein PFAM: Alcohol dehydrogenase GroES domain protein%3B Alcohol dehydrogenase zinc-binding domain protein~KEGG: zinc-binding dehydrogenase gene gene4533 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4479 Amir_4480 Amir_4480 Amir_4480 5305327 5306661 + hypothetical protein KEGG: rle:pRL120266 hypothetical protein gene gene4534 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4480 Amir_4481 Amir_4481 Amir_4481 5306658 5307833 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: cvi:CV_1398 hypothetical protein gene gene4535 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4481 Amir_4482 Amir_4482 Amir_4482 5307830 5308987 + ROK family protein PFAM: ROK family protein~KEGG: scl:sce7667 ROK family transcriptional regulator gene gene4536 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4482 Amir_4483 Amir_4483 Amir_4483 5309081 5309464 - hypothetical protein KEGG: mpo:Mpop_1521 short-chain dehydrogenase/reductase SDR gene gene4537 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4483 Amir_4484 Amir_4484 Amir_4484 5309496 5309918 - conserved hypothetical protein KEGG: bja:blr2505 hypothetical protein gene gene4538 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4484 Amir_4485 Amir_4485 Amir_4485 5310025 5311170 - lysine 2%2C3-aminomutase YodO family protein KEGG: ade:Adeh_2548 L-lysine 2%2C3-aminomutase~TIGRFAM: lysine 2%2C3-aminomutase YodO family protein~PFAM: Radical SAM domain protein gene gene4539 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4485 Amir_4486 Amir_4486 Amir_4486 5311185 5316260 - amino acid adenylation domain protein TIGRFAM: amino acid adenylation domain protein~PFAM: AMP-dependent synthetase and ligase%3B phosphopantetheine-binding%3B condensation domain protein~KEGG: scl:sce8257 non-ribosomal peptide synthetase gene gene4540 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4486 Amir_4487 Amir_4487 Amir_4487 5316799 5317956 + monooxygenase FAD-binding PFAM: monooxygenase FAD-binding%3B FAD dependent oxidoreductase~KEGG: afw:Anae109_4239 monooxygenase FAD-binding gene gene4541 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4487 Amir_4488 Amir_4488 Amir_4488 5317992 5319260 + L-lysine 6-monooxygenase (NADPH) PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase~KEGG: pen:PSEEN0980 L-ornithine 5-/L-lysine 6- monooxygenase gene gene4542 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4488 Amir_4489 Amir_4489 Amir_4489 5319270 5319926 + FMN-binding negative transcriptional regulator PFAM: Negative transcriptional regulator~KEGG: pmy:Pmen_0131 FMN-binding negative transcriptional regulator gene gene4543 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4489 Amir_4490 Amir_4490 Amir_4490 5319923 5321431 + amino acid adenylation domain protein TIGRFAM: amino acid adenylation domain protein~PFAM: AMP-dependent synthetase and ligase~KEGG: hch:HCH_03445 non-ribosomal peptide synthetase modules and related protein gene gene4544 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4490 Amir_4491 Amir_4491 Amir_4491 5321478 5322749 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: sus:Acid_2815 major facilitator transporter gene gene4545 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4491 Amir_4492 Amir_4492 Amir_4492 5322746 5324695 - carbamoyl transferase NodU family-like protein KEGG: rpe:RPE_0078 carbamoyltransferase gene gene4546 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4492 Amir_4493 Amir_4493 Amir_4493 5324692 5325459 - Thioesterase PFAM: Thioesterase~KEGG: mxa:MXAN_4290 putative thioesterase gene gene4547 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4493 Amir_4494 Amir_4494 Amir_4494 5325437 5326720 - cytochrome P450 PFAM: cytochrome P450~KEGG: scl:sce7867 cytochrome P450 CYP124E1 gene gene4548 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4494 Amir_4495 Amir_4495 Amir_4495 5326717 5328396 - amino acid adenylation domain protein TIGRFAM: amino acid adenylation domain protein~PFAM: AMP-dependent synthetase and ligase%3B phosphopantetheine-binding~KEGG: mxa:MXAN_4601 non-ribosomal peptide synthase gene gene4549 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4495 Amir_4496 Amir_4496 Amir_4496 5328398 5329090 - conserved hypothetical protein KEGG: bja:blr5743 hypothetical protein gene gene4550 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4496 Amir_4497 Amir_4497 Amir_4497 5329090 5330094 - GHMP kinase PFAM: GHMP kinase~KEGG: bvi:Bcep1808_5165 GHMP kinase gene gene4551 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4497 Amir_4498 Amir_4498 Amir_4498 5330091 5335769 - amino acid adenylation domain protein TIGRFAM: amino acid adenylation domain protein~PFAM: AMP-dependent synthetase and ligase%3B Thioesterase%3B phosphopantetheine-binding%3B condensation domain protein~KEGG: mxa:MXAN_3618 non-ribosomal peptide synthetase gene gene4552 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4498 Amir_4499 Amir_4499 Amir_4499 5335766 5336812 - Threonine aldolase PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase%3B aminotransferase class-III~KEGG: bpd:BURPS668_2111 L-allo-threonine aldolase gene gene4553 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4499 Amir_4500 Amir_4500 Amir_4500 5336809 5339079 - Cysteine synthase PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit%3B protein of unknown function DUF201%3B phosphoribosylglycinamide synthetase~KEGG: bps:BPSL1715 argininosuccinate lyase gene gene4554 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4500 Amir_4501 Amir_4501 Amir_4501 5339076 5340659 - fumarate lyase PFAM: fumarate lyase~KEGG: rsq:Rsph17025_3642 hypothetical protein gene gene4555 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4501 Amir_4502 Amir_4502 Amir_4502 5340656 5340871 - MbtH domain protein PFAM: MbtH domain protein~KEGG: rpc:RPC_1861 MbtH-like protein gene gene4556 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4502 Amir_4503 Amir_4503 Amir_4503 5340885 5342804 - amino acid adenylation domain protein TIGRFAM: amino acid adenylation domain protein~PFAM: AMP-dependent synthetase and ligase%3B phosphopantetheine-binding~KEGG: aav:Aave_3731 amino acid adenylation domain gene gene4557 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4503 Amir_4504 Amir_4504 Amir_4504 5343145 5343639 + hypothetical protein gene gene4558 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4504 Amir_4505 Amir_4505 Amir_4505 5343682 5344965 + condensation domain protein PFAM: condensation domain protein~KEGG: mxa:MXAN_4415 non-ribosomal peptide synthetase/polyketide synthase gene gene4559 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4505 Amir_4506 Amir_4506 Amir_4506 5344962 5346830 + amino acid adenylation domain protein TIGRFAM: amino acid adenylation domain protein~PFAM: AMP-dependent synthetase and ligase%3B phosphopantetheine-binding~KEGG: mxa:MXAN_3779 non-ribosomal peptide synthetase/polyketide synthase gene gene4560 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4506 Amir_4507 Amir_4507 Amir_4507 5346994 5347242 + conserved hypothetical protein KEGG: mlo:mlr3218 hypothetical protein gene gene4561 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4507 Amir_4508 Amir_4508 Amir_4508 5347572 5349653 + superfamily I DNA and RNA helicase-like protein KEGG: bcz:BCZK2539 UvrD/Rep helicase family protein gene gene4562 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4508 Amir_4509 Amir_4509 Amir_4509 5349713 5351884 - MMPL domain protein PFAM: MMPL domain protein~KEGG: bsu:BSU05430 hypothetical protein gene gene4563 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4509 Amir_4510 Amir_4510 Amir_4510 5352063 5353289 + histidine kinase PFAM: histidine kinase dimerization and phosphoacceptor region%3B ATP-binding region ATPase domain protein~KEGG: scl:sce5432 putative two-component system sensor kinase gene gene4564 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4510 Amir_4511 Amir_4511 Amir_4511 5353286 5353966 + two component transcriptional regulator%2C LuxR family PFAM: response regulator receiver%3B regulatory protein LuxR~SMART: response regulator receiver%3B regulatory protein LuxR~KEGG: scl:sce5431 two-component system response regulator gene gene4565 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4511 Amir_4512 Amir_4512 Amir_4512 5354019 5354672 + VanZ family protein PFAM: VanZ family protein~KEGG: bha:BH2294 hypothetical protein gene gene4566 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4512 Amir_4513 Amir_4513 Amir_4513 5354581 5355729 - histidine kinase PFAM: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B histidine kinase HAMP region domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase HAMP region domain protein%3B histidine kinase A domain protein~KEGG: sfu:Sfum_2006 integral membrane sensor signal transduction histidine kinase gene gene4567 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4513 Amir_4514 Amir_4514 Amir_4514 5355722 5356390 - two component transcriptional regulator%2C winged helix family PFAM: response regulator receiver%3B transcriptional regulator domain protein~SMART: response regulator receiver~KEGG: sus:Acid_5477 two component transcriptional regulator gene gene4568 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4514 Amir_4515 Amir_4515 Amir_4515 5356496 5357632 - peptidase S1 and S6 chymotrypsin/Hap PFAM: peptidase S1 and S6 chymotrypsin/Hap~KEGG: mxa:MXAN_5466 peptidase%2C S1E (streptogrisin A) subfamily gene gene4569 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4515 Amir_4516 Amir_4516 Amir_4516 5357935 5358984 + cellulose-binding family II PFAM: cellulose-binding family II%3B lipolytic protein G-D-S-L family~SMART: cellulose-binding family II~KEGG: scl:sce7021 endoglucanase gene gene4570 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4516 Amir_4517 Amir_4517 Amir_4517 5359238 5359597 + hypothetical protein gene gene4571 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4517 Amir_4518 Amir_4518 Amir_4518 5359594 5360172 + hypothetical protein gene gene4572 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4518 Amir_4519 Amir_4519 Amir_4519 5360186 5361508 + hypothetical protein KEGG: GG22683 gene product from transcript GG22683- RA gene gene4573 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4519 Amir_4520 Amir_4520 Amir_4520 5361505 5362284 + hypothetical protein KEGG: rru:Rru_A3404 TrkA domain-containing protein gene gene4574 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4520 Amir_4521 Amir_4521 Amir_4521 5362294 5363166 - alpha/beta hydrolase fold protein PFAM: alpha/beta hydrolase fold~KEGG: bsu:BSU03260 hypothetical protein gene gene4575 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4521 Amir_4522 Amir_4522 Amir_4522 5363436 5364356 + extracellular metalloprotease KEGG: bsu:BSU02240 extracellular metalloprotease gene gene4576 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4522 Amir_4523 Amir_4523 Amir_4523 5364413 5364832 + protein of unknown function DUF306 Meta and HslJ PFAM: protein of unknown function DUF306 Meta and HslJ~KEGG: sit:TM1040_1898 twin-arginine translocation pathway signal gene gene4577 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4523 Amir_4524 Amir_4524 Amir_4524 5364843 5365229 - hypothetical protein gene gene4578 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4524 Amir_4525 Amir_4525 Amir_4525 5365226 5367813 - pseudogene gene4579 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4525 Amir_4526 Amir_4526 Amir_4526 5368097 5368786 - hypothetical protein KEGG: Gpr125%3B G protein-coupled receptor 125%3B K08462 G protein-coupled receptor 125 gene gene4580 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4526 Amir_4527 Amir_4527 Amir_4527 5368783 5369091 - hypothetical protein gene gene4581 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4527 Amir_4528 Amir_4528 Amir_4528 5369197 5370045 - hypothetical protein gene gene4582 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4528 Amir_4529 Amir_4529 Amir_4529 5370211 5370645 - hypothetical protein gene gene4583 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4529 Amir_4530 Amir_4530 Amir_4530 5370867 5371301 + hypothetical protein gene gene4584 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4530 Amir_4531 Amir_4531 Amir_4531 5371621 5372274 + transcriptional regulator%2C LuxR family KEGG: rso:RS03147 hypothetical protein~TIGRFAM: PAS sensor protein~PFAM: regulatory protein LuxR%3B PAS fold-4 domain protein~SMART: PAS domain containing protein%3B regulatory protein LuxR gene gene4585 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4531 Amir_4532 Amir_4532 Amir_4532 5372300 5373301 + aminoglycoside phosphotransferase PFAM: aminoglycoside phosphotransferase~KEGG: scl:sce5395 aminoglycoside phosphotransferase gene gene4586 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4532 Amir_4533 Amir_4533 Amir_4533 5373348 5374430 - hypothetical protein gene gene4587 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4533 Amir_4534 Amir_4534 Amir_4534 5374427 5375422 - oxidoreductase domain protein PFAM: oxidoreductase domain protein%3B Semialdehyde dehydrogenase NAD - binding%3B Oxidoreductase domain~KEGG: hne:HNE_0812 oxidoreductase%2C NAD-binding gene gene4588 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4534 Amir_4535 Amir_4535 Amir_4535 5375412 5376671 - hypothetical protein KEGG: scl:sce0971 hypothetical protein gene gene4589 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4535 Amir_4536 Amir_4536 Amir_4536 5376668 5376964 - hypothetical protein KEGG: sfu:Sfum_3460 acyl carrier protein gene gene4590 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4536 Amir_4537 Amir_4537 Amir_4537 5376967 5378142 - Radical SAM domain protein PFAM: Radical SAM domain protein~KEGG: sfu:Sfum_2252 radical SAM domain protein gene gene4591 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4537 Amir_4538 Amir_4538 Amir_4538 5378419 5379774 + condensation domain protein PFAM: condensation domain protein~KEGG: bmn:BMA10247_A0621 putative peptide synthetase gene gene4592 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4538 Amir_4539 Amir_4539 Amir_4539 5379884 5380258 + hypothetical protein gene gene4593 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4539 Amir_4540 Amir_4540 Amir_4540 5380764 5382867 - pseudogene gene4594 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4540 Amir_4541 Amir_4541 Amir_4541 5382947 5383078 - hypothetical protein gene gene4595 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4541 Amir_4542 Amir_4542 Amir_4542 5383248 5383601 - hypothetical protein gene gene4596 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4542 Amir_4543 Amir_4543 Amir_4543 5383588 5384067 - hypothetical protein gene gene4597 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4543 Amir_4544 Amir_4544 Amir_4544 5384030 5388496 - YD repeat protein TIGRFAM: YD repeat protein~PFAM: YD repeat-containing protein~KEGG: rso:RS05482 putative rhs-related transmembrane protein gene gene4598 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4544 Amir_4545 Amir_4545 Amir_4545 5389116 5389673 + hypothetical protein gene gene4600 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4545 Amir_4546 Amir_4546 Amir_4546 5389670 5390743 + integrase family protein PFAM: integrase family protein~KEGG: aeh:Mlg_1488 tyrosine recombinase XerD gene gene4601 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4546 Amir_4547 Amir_4547 Amir_4547 5390827 5391042 - pseudogene gene4602 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4547 Amir_4548 Amir_4548 Amir_4548 5391167 5391682 - pseudogene gene4603 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4548 Amir_4549 Amir_4549 Amir_4549 5391796 5393868 - peptidase S1 and S6 chymotrypsin/Hap PFAM: peptidase S1 and S6 chymotrypsin/Hap%3B FG-GAP repeat protein~SMART: peptidase S1 and S6 chymotrypsin/Hap~KEGG: acp:A2cp1_3748 hypothetical protein gene gene4604 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4549 Amir_4550 Amir_4550 Amir_4550 5393882 5397004 - methyl-accepting chemotaxis sensory transducer PFAM: protein of unknown function DUF312~KEGG: SNF2 superfamily protein gene gene4605 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4550 Amir_4551 Amir_4551 Amir_4551 5397643 5398521 + hypothetical protein gene gene4606 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4551 Amir_4552 Amir_4552 Amir_4552 5399220 5399834 - pseudogene gene4607 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4552 Amir_4553 Amir_4553 Amir_4553 5400713 5401804 + putative transposase KEGG: bxe:Bxe_A3516 putative transposase gene gene4608 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4553 Amir_4554 Amir_4554 Amir_4554 5402015 5403241 + transcriptional regulator%2C XRE family PFAM: helix-turn-helix domain protein~SMART: helix-turn-helix domain protein~KEGG: afw:Anae109_3372 TPR repeat-containing protein gene gene4609 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4554 Amir_4555 Amir_4555 Amir_4555 5403341 5404459 + hypothetical protein KEGG: mucin-associated surface protein (MASP) gene gene4610 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4555 Amir_4556 Amir_4556 Amir_4556 5405125 5406549 + hypothetical protein KEGG: mca:MCA2681 hypothetical protein gene gene4611 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4556 Amir_4557 Amir_4557 Amir_4557 5406539 5406775 - hypothetical protein gene gene4612 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4557 Amir_4558 Amir_4558 Amir_4558 5406911 5408107 - hypothetical protein gene gene4613 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4558 Amir_4559 Amir_4559 Amir_4559 5408444 5410147 - hypothetical protein gene gene4614 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4559 Amir_4560 Amir_4560 Amir_4560 5410429 5410551 - hypothetical protein gene gene4615 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4560 Amir_4561 Amir_4561 Amir_4561 5411020 5411121 + hypothetical protein gene gene4616 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4561 Amir_4562 Amir_4562 Amir_4562 5411205 5411414 + pseudogene gene4617 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4562 Amir_4563 Amir_4563 Amir_4563 5411564 5412235 + hypothetical protein gene gene4618 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4563 Amir_4564 Amir_4564 Amir_4564 5412561 5412857 + hypothetical protein gene gene4619 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4564 Amir_4565 Amir_4565 Amir_4565 5413208 5413477 + hypothetical protein gene gene4620 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4565 Amir_4566 Amir_4566 Amir_4566 5413733 5414206 + hypothetical protein gene gene4621 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4566 Amir_4567 Amir_4567 Amir_4567 5414493 5415203 + hypothetical protein KEGG: hypothetical protein LOC743833 gene gene4622 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4567 Amir_4568 Amir_4568 Amir_4568 5415562 5416518 + hypothetical protein gene gene4623 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4568 Amir_4569 Amir_4569 Amir_4569 5416695 5416811 + hypothetical protein gene gene4624 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4569 Amir_4570 Amir_4570 Amir_4570 5416932 5418176 + transcriptional regulator%2C XRE family SMART: helix-turn-helix domain protein~KEGG: pin:Ping_0445 colicin uptake-like protein gene gene4625 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4570 Amir_4571 Amir_4571 Amir_4571 5418459 5419016 + hypothetical protein gene gene4626 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4571 Amir_4572 Amir_4572 Amir_4572 5419291 5419461 + hypothetical protein gene gene4627 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4572 Amir_4573 Amir_4573 Amir_4573 5419458 5420165 + HAD-superfamily hydrolase%2C subfamily IA%2C variant 3 TIGRFAM: HAD-superfamily hydrolase%2C subfamily IA%2C variant 3~PFAM: Haloacid dehalogenase domain protein hydrolase~KEGG: pmy:Pmen_3998 phosphoglycolate phosphatase gene gene4628 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4573 Amir_4574 Amir_4574 Amir_4574 5420633 5421262 + hypothetical protein gene gene4629 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4574 Amir_4575 Amir_4575 Amir_4575 5421259 5421969 + HAD-superfamily hydrolase%2C subfamily IA%2C variant 3 TIGRFAM: HAD-superfamily hydrolase%2C subfamily IA%2C variant 3%3B HAD-superfamily hydrolase%2C subfamily IA%2C variant 1~PFAM: Haloacid dehalogenase domain protein hydrolase~KEGG: mno:Mnod_6944 phosphoglycolate phosphatase gene gene4630 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4575 Amir_4576 Amir_4576 Amir_4576 5422067 5423161 + hypothetical protein KEGG: sus:Acid_3202 alpha/beta hydrolase fold gene gene4631 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4576 Amir_4577 Amir_4577 Amir_4577 5424354 5424608 + pseudogene gene4632 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4577 Amir_4578 Amir_4578 Amir_4578 5424665 5425444 + transposase IS4 family protein PFAM: transposase IS4 family protein~KEGG: similar to F57G4.9 gene gene4633 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4578 Amir_4579 Amir_4579 Amir_4579 5425742 5426155 + pseudogene gene4634 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4579 Amir_4580 Amir_4580 Amir_4580 5426251 5427441 + hypothetical protein KEGG: numb%3B numb homolog (Drosophila)%3B K06057 numb gene gene4635 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4580 Amir_4581 Amir_4581 Amir_4581 5427465 5427707 - pseudogene gene4636 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4581 Amir_4582 Amir_4582 Amir_4582 5427704 5428408 - pseudogene gene4637 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4582 Amir_4583 Amir_4583 Amir_4583 5429140 5429668 - pseudogene gene4638 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4583 Amir_4584 Amir_4584 Amir_4584 5429735 5429995 - hypothetical protein gene gene4639 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4584 Amir_4585 Amir_4585 Amir_4585 5430003 5434247 - hypothetical protein KEGG: scl:sce2557 putative secreted protein gene gene4640 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4585 Amir_4586 Amir_4586 Amir_4586 5434642 5435196 - GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: kpn:KPN_01751 putative acetyltransferase gene gene4641 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4586 Amir_4587 Amir_4587 Amir_4587 5435237 5436142 - Methyltransferase type 11 PFAM: Methyltransferase type 11%3B Methyltransferase type 12~KEGG: pfo:Pfl01_3628 hypothetical protein gene gene4642 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4587 Amir_4588 Amir_4588 Amir_4588 5436139 5441916 - amino acid adenylation domain protein TIGRFAM: amino acid adenylation domain protein~PFAM: AMP-dependent synthetase and ligase%3B Thioesterase%3B phosphopantetheine-binding%3B condensation domain protein~KEGG: pap:PSPA7_2859 peptide synthase gene gene4643 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4588 Amir_4589 Amir_4589 Amir_4589 5441913 5452958 - amino acid adenylation domain protein TIGRFAM: amino acid adenylation domain protein~PFAM: AMP-dependent synthetase and ligase%3B phosphopantetheine-binding%3B condensation domain protein~KEGG: dac:Daci_4753 amino acid adenylation domain- containing protein gene gene4644 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4589 Amir_4590 Amir_4590 Amir_4590 5453084 5454121 + 4-hydroxyphenylpyruvate dioxygenase KEGG: sus:Acid_4167 4-hydroxyphenylpyruvate dioxygenase~TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase~PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase gene gene4645 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4590 Amir_4591 Amir_4591 Amir_4591 5454137 5455432 + putative transcriptional regulator%2C GntR family PFAM: aminotransferase class I and II~KEGG: hch:HCH_01676 transcriptional regulator gene gene4646 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4591 Amir_4592 Amir_4592 Amir_4592 5455474 5456700 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: kpe:KPK_3480 multidrug resistance protein MdtH gene gene4647 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4592 Amir_4593 Amir_4593 Amir_4593 5456801 5457022 + MbtH domain protein PFAM: MbtH domain protein~KEGG: scl:sce3255 hypothetical protein gene gene4648 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4593 Amir_4594 Amir_4594 Amir_4594 5457043 5458026 + Pyridoxal-5'-phosphate-dependent protein beta subunit PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit~KEGG: mex:Mext_2357 D-cysteine desulfhydrase gene gene4649 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4594 Amir_4595 Amir_4595 Amir_4595 5458029 5459063 + Poly(3-hydroxybutyrate) depolymerase-like protein KEGG: bte:BTH_II0297 LpqC%2C putative gene gene4650 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4595 Amir_4596 Amir_4596 Amir_4596 5459086 5460282 - cytochrome P450 PFAM: cytochrome P450~KEGG: rpd:RPD_0041 cytochrome P450 gene gene4651 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4596 Amir_4597 Amir_4597 Amir_4597 5460312 5462060 - transcriptional regulator%2C SARP family PFAM: transcriptional activator domain%3B transcriptional regulator domain protein~KEGG: scl:sce8759 hypothetical protein gene gene4652 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4597 Amir_4598 Amir_4598 Amir_4598 5462153 5463283 - FMN-dependent alpha-hydroxy acid dehydrogenase PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase~KEGG: scl:sce7671 (S)-2-hydroxy-acid oxidase gene gene4653 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4598 Amir_4599 Amir_4599 Amir_4599 5463890 5465227 - cytochrome P450 PFAM: cytochrome P450~KEGG: mxa:MXAN_2304 cytochrome P450 family protein gene gene4654 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4599 Amir_4600 Amir_4600 Amir_4600 5465375 5465596 - MbtH domain protein PFAM: MbtH domain protein~KEGG: cvi:CV_2232 MbtH-like protein gene gene4655 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4600 Amir_4601 Amir_4601 Amir_4601 5465622 5466536 - hypothetical protein KEGG: hypothetical protein gene gene4656 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4601 Amir_4602 Amir_4602 Amir_4602 5466565 5467713 - monooxygenase FAD-binding PFAM: monooxygenase FAD-binding~KEGG: pag:PLES_17361 putative FAD-dependent monooxygenase gene gene4657 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4602 Amir_4603 Amir_4603 Amir_4603 5467710 5470019 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B condensation domain protein~KEGG: pau:PA14_21000 hypothetical protein gene gene4658 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4603 Amir_4604 Amir_4604 Amir_4604 5470016 5483839 - amino acid adenylation domain protein TIGRFAM: amino acid adenylation domain protein~PFAM: AMP-dependent synthetase and ligase%3B Beta- ketoacyl synthase%3B Alcohol dehydrogenase GroES domain protein%3B short-chain dehydrogenase/reductase SDR%3B condensation domain protein%3B Acyl transferase%3B KR domain protein%3B Alcohol dehydrogenase zinc-binding domain protein%3B Thioesterase%3B phosphopantetheine-binding~KEGG: pae:PA3327 non-ribosomal peptide synthetase gene gene4659 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4604 Amir_4605 Amir_4605 Amir_4605 5484257 5485666 + cytochrome P450 PFAM: cytochrome P450~KEGG: rde:RD1_3506 cytochrome P450 family protein%2C putative gene gene4660 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4605 Amir_4606 Amir_4606 Amir_4606 5485810 5487405 + Carboxylesterase type B PFAM: Carboxylesterase type B~KEGG: rpe:RPE_0251 carboxylesterase%2C type B gene gene4661 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4606 Amir_4607 Amir_4607 Amir_4607 5487844 5489091 - hypothetical protein KEGG: scl:sce0661 Mannan endo-1%2C4-beta-mannosidase gene gene4662 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4607 Amir_4608 Amir_4608 Amir_4608 5489088 5490122 - transcriptional regulator%2C LacI family PFAM: regulatory protein LacI%3B periplasmic binding protein/LacI transcriptional regulator~SMART: regulatory protein LacI~KEGG: scl:sce0662 LacI family transcription regulator gene gene4663 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4608 Amir_4609 Amir_4609 Amir_4609 5490270 5491553 + extracellular solute-binding protein family 1 PFAM: extracellular solute-binding protein family 1~KEGG: bha:BH3845 ABC transporter (substrate-binding protein) gene gene4664 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4609 Amir_4610 Amir_4610 Amir_4610 5491568 5492503 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: rlt:Rleg2_5350 binding-protein-dependent transport systems inner membrane component gene gene4665 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4610 Amir_4611 Amir_4611 Amir_4611 5492525 5493376 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: vei:Veis_0946 binding-protein-dependent transport systems inner membrane component gene gene4666 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4611 Amir_4612 Amir_4612 Amir_4612 5493373 5495688 + glycoside hydrolase family 3 domain protein PFAM: glycoside hydrolase family 3 domain protein~KEGG: sus:Acid_6936 glycoside hydrolase family 3 protein gene gene4667 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4612 Amir_4613 Amir_4613 Amir_4613 5495676 5496959 + conserved hypothetical protein PFAM: conserved hypothetical protein~KEGG: hypothetical LOC367592%3B K09704 hypothetical protein gene gene4668 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4613 Amir_4614 Amir_4614 Amir_4614 5496964 5497632 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: mlo:mll1924 transcription regulator gene gene4669 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4614 Amir_4615 Amir_4615 Amir_4615 5497778 5498956 + monooxygenase FAD-binding PFAM: monooxygenase FAD-binding~KEGG: sme:SMc02891 putative oxidoreductase transmembrane protein gene gene4670 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4615 Amir_4616 Amir_4616 Amir_4616 5499190 5500044 + hypothetical protein KEGG: gur:Gura_2349 hypothetical protein gene gene4671 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4616 Amir_4617 Amir_4617 Amir_4617 5500111 5500491 - hypothetical protein gene gene4672 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4617 Amir_4618 Amir_4618 Amir_4618 5500749 5501987 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: pst:PSPTO_4522 hypothetical protein gene gene4673 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4618 Amir_4619 Amir_4619 Amir_4619 5501991 5502794 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: bpe:BP2854 short chain dehydrogenase gene gene4674 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4619 Amir_4620 Amir_4620 Amir_4620 5502890 5503474 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: acp:A2cp1_2482 transcriptional regulator%2C TetR family gene gene4675 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4620 Amir_4621 Amir_4621 Amir_4621 5503602 5505095 + Ricin B lectin PFAM: Ricin B lectin%3B glycoside hydrolase family 5~SMART: Ricin B lectin~KEGG: scl:sce0748 Ricin precursor and Poly(3- hydroxybutyrate) depolymerase fusion gene gene4676 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4621 Amir_4622 Amir_4622 Amir_4622 5505178 5505954 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B NAD- dependent epimerase/dehydratase~KEGG: scl:sce7498 short chain dehydrogenase gene gene4677 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4622 Amir_4623 Amir_4623 Amir_4623 5505971 5506864 + transcriptional regulator%2C MerR family PFAM: regulatory protein MerR%3B transcription activator effector binding~SMART: regulatory protein MerR~KEGG: cvi:CV_4236 MerR family transcriptional regulator gene gene4678 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4623 Amir_4624 Amir_4624 Amir_4624 5506842 5507843 - transcriptional regulator%2C MerR family PFAM: regulatory protein MerR%3B PBS lyase HEAT domain protein repeat-containing protein~SMART: regulatory protein MerR%3B PBS lyase HEAT domain protein repeat-containing protein~KEGG: bur:Bcep18194_B2665 MerR family transcriptional regulator gene gene4679 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4624 Amir_4625 Amir_4625 Amir_4625 5507837 5508505 - hypothetical protein KEGG: ppw:PputW619_5008 heat repeat-containing PBS lyase gene gene4680 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4625 Amir_4626 Amir_4626 Amir_4626 5508825 5510438 + AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: pzu:PHZ_c2512 long-chain-fatty-acid--CoA ligase gene gene4681 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4626 Amir_4627 Amir_4627 Amir_4627 5510435 5511136 + conserved hypothetical protein KEGG: bsu:BSU35070 hypothetical protein gene gene4682 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4627 Amir_4628 Amir_4628 Amir_4628 5511190 5511915 + MCP methyltransferase%2C CheR-type PFAM: Methyltransferase type 12%3B Methyltransferase type 11%3B MCP methyltransferase CheR-type~KEGG: pfl:PFL_1036 ToxA protein gene gene4683 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4628 Amir_4629 Amir_4629 Amir_4629 5512002 5512750 - pseudogene gene4684 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4629 Amir_4630 Amir_4630 Amir_4630 5512855 5513184 - protein of unknown function DUF1330 PFAM: protein of unknown function DUF1330~KEGG: pde:Pden_4583 protein of unknown function DUF1330 gene gene4685 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4630 Amir_4631 Amir_4631 Amir_4631 5513246 5514061 + transcriptional regulator%2C XRE family PFAM: helix-turn-helix domain protein~SMART: helix-turn-helix domain protein~KEGG: transcriptional regulator%2C XRE family gene gene4686 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4631 Amir_4632 Amir_4632 Amir_4632 5514078 5514965 - transcriptional regulator%2C LysR family PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: bpt:Bpet4146 LysR family transcriptional regulator gene gene4687 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4632 Amir_4633 Amir_4633 Amir_4633 5515035 5515982 + Pyridoxal-5'-phosphate-dependent protein beta subunit PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit~KEGG: met:M446_6836 threonine dehydratase gene gene4688 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4633 Amir_4634 Amir_4634 Amir_4634 5516079 5520353 + glycoside hydrolase family 2 sugar binding PFAM: glycoside hydrolase family 2 sugar binding%3B glycoside hydrolase family 42 domain 5 loop region%3B Glycosyl hydrolase family 98 putative carbohydrate binding module%3B glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich%3B glycoside hydrolase family 2 TIM barrel~SMART: Glycosyl hydrolase family 98 putative carbohydrate binding module%3B LamG domain protein jellyroll fold domain protein~KEGG: sus:Acid_4607 beta-galactosidase gene gene4689 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4634 Amir_4635 Amir_4635 Amir_4635 5520406 5520819 - hypothetical protein gene gene4690 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4635 Amir_4636 Amir_4636 Amir_4636 5520930 5521892 - transcriptional regulator%2C LuxR family PFAM: regulatory protein LuxR~SMART: regulatory protein LuxR~KEGG: ank:AnaeK_0902 two component transcriptional regulator%2C LuxR family gene gene4691 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4636 Amir_4637 Amir_4637 Amir_4637 5522020 5522949 - Alcohol dehydrogenase GroES domain protein PFAM: Alcohol dehydrogenase GroES domain protein%3B Alcohol dehydrogenase zinc-binding domain protein~KEGG: mlo:mlr2819 oxidoreductase gene gene4692 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4637 Amir_4638 Amir_4638 Amir_4638 5523082 5523579 + transcriptional regulator%2C MarR family PFAM: regulatory protein MarR~SMART: regulatory protein MarR~KEGG: bch:Bcen2424_4743 MarR family transcriptional regulator gene gene4693 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4638 Amir_4639 Amir_4639 Amir_4639 5523699 5525024 + amino acid permease-associated region PFAM: amino acid permease-associated region~KEGG: lpc:LPC_0052 amino acid transporter%2C permease gene gene4694 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4639 Amir_4640 Amir_4640 Amir_4640 5525125 5525967 + hypothetical protein KEGG: sat:SYN_02434 hydrolase or acyltransferase gene gene4695 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4640 Amir_4641 Amir_4641 Amir_4641 5525964 5526656 + hypothetical protein gene gene4696 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4641 Amir_4642 Amir_4642 Amir_4642 5526749 5527843 + glycosyl transferase group 1 PFAM: glycosyl transferase group 1~KEGG: gur:Gura_3220 glycosyl transferase%2C group 1 gene gene4697 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4642 Amir_4643 Amir_4643 Amir_4643 5527860 5528660 + glycosyl transferase family 2 PFAM: glycosyl transferase family 2~KEGG: bcm:Bcenmc03_0849 glycosyl transferase family protein gene gene4698 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4643 Amir_4644 Amir_4644 Amir_4644 5529317 5529937 - hypothetical protein gene gene4699 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4644 Amir_4645 Amir_4645 Amir_4645 5530090 5531103 - hypothetical protein gene gene4700 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4645 Amir_4646 Amir_4646 Amir_4646 5531325 5532425 - mycothiol-dependent formaldehyde dehydrogenase TIGRFAM: mycothiol-dependent formaldehyde dehydrogenase~PFAM: Alcohol dehydrogenase zinc-binding domain protein%3B Alcohol dehydrogenase GroES domain protein~KEGG: oca:OCAR_6856 alcohol dehydrogenase class 3 gene gene4701 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4646 Amir_4647 Amir_4647 Amir_4647 5532742 5533992 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: reu:Reut_B3953 major facilitator transporter gene gene4702 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4647 Amir_4648 Amir_4648 Amir_4648 5534320 5535534 + protein of unknown function DUF201 PFAM: protein of unknown function DUF201%3B phosphoribosylglycinamide synthetase~KEGG: scl:sce5193 hypothetical protein gene gene4703 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4648 Amir_4649 Amir_4649 Amir_4649 5535531 5536811 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: ank:AnaeK_4388 major facilitator superfamily MFS_1 gene gene4704 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4649 Amir_4650 Amir_4650 Amir_4650 5537170 5538774 + AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: sdn:Sden_3736 AMP-dependent synthetase and ligase gene gene4705 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4650 Amir_4651 Amir_4651 Amir_4651 5538818 5539066 + phosphopantetheine-binding PFAM: phosphopantetheine-binding~KEGG: mxa:MXAN_3631 polyketide synthase type I gene gene4706 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4651 Amir_4652 Amir_4652 Amir_4652 5539063 5540028 + Alpha/beta hydrolase fold-3 domain protein PFAM: Alpha/beta hydrolase fold-3 domain protein~KEGG: bcy:Bcer98_3668 alpha/beta hydrolase domain- containing protein gene gene4707 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4652 Amir_4653 Amir_4653 Amir_4653 5540074 5541123 - Transketolase domain protein PFAM: Transketolase domain protein~KEGG: bbt:BBta_4462 pyruvate dehydrogenase subunit beta gene gene4708 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4653 Amir_4654 Amir_4654 Amir_4654 5541120 5542514 - 3-carboxy-cis%2Ccis-muconate cycloisomerase TIGRFAM: 3-carboxy-cis%2Ccis-muconate cycloisomerase~PFAM: fumarate lyase~KEGG: reu:Reut_B5023 3-carboxy-cis%2Ccis-muconate cycloisomerase gene gene4709 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4654 Amir_4655 Amir_4655 Amir_4655 5542504 5544816 - conserved hypothetical protein KEGG: hypothetical protein gene gene4710 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4655 Amir_4656 Amir_4656 Amir_4656 5545289 5546032 + conserved hypothetical protein KEGG: bcz:BCZK1714 hypothetical protein gene gene4711 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4656 Amir_4657 Amir_4657 Amir_4657 5546154 5547251 + hypothetical protein KEGG: bja:blr1218 hypothetical protein gene gene4712 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4657 Amir_4658 Amir_4658 Amir_4658 5547438 5548211 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B KR domain protein~KEGG: short chain dehydrogenase protein gene gene4713 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4658 Amir_4659 Amir_4659 Amir_4659 5548489 5549208 + hypothetical protein gene gene4714 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4659 Amir_4660 Amir_4660 Amir_4660 5549427 5550164 + Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase~KEGG: dps:DP1551 hypothetical protein gene gene4715 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4660 Amir_4661 Amir_4661 Amir_4661 5550161 5551153 + Alpha/beta hydrolase fold-3 domain protein PFAM: Alpha/beta hydrolase fold-3 domain protein~KEGG: bcy:Bcer98_3668 alpha/beta hydrolase domain- containing protein gene gene4716 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4661 Amir_4662 Amir_4662 Amir_4662 5551387 5552238 + conserved hypothetical protein KEGG: xcb:XC_3673 hypothetical protein gene gene4717 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4662 Amir_4663 Amir_4663 Amir_4663 5552303 5553307 - Pectinesterase PFAM: Pectinesterase~KEGG: xop:PXO_00373 pectinesterase gene gene4718 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4663 Amir_4664 Amir_4664 Amir_4664 5553359 5554216 - lipolytic protein G-D-S-L family PFAM: lipolytic protein G-D-S-L family~KEGG: bsu:BSU07020 hypothetical protein gene gene4719 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4664 Amir_4665 Amir_4665 Amir_4665 5554572 5554952 + Glyoxalase/bleomycin resistance protein/dioxygenase PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase~KEGG: rlt:Rleg2_1526 hypothetical protein gene gene4720 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4665 Amir_4666 Amir_4666 Amir_4666 5555206 5555433 - response regulator receiver protein KEGG: bha:BH0581 two-component response regulator gene gene4721 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4666 Amir_4667 Amir_4667 Amir_4667 5555468 5555851 - hypothetical protein gene gene4722 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4667 Amir_4668 Amir_4668 Amir_4668 5555848 5556288 - ABC-type multidrug transport system%2C permease component KEGG: ilo:IL0311 ABC-type multidrug transport system%2C permease component gene gene4723 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4668 Amir_4669 Amir_4669 Amir_4669 5556285 5556860 - ABC transporter related PFAM: ABC transporter related~KEGG: ccs:CCNA_01205 ABC transporter ATP-binding protein gene gene4724 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4669 Amir_4670 Amir_4670 Amir_4670 5556986 5557879 + conserved hypothetical protein KEGG: atc:AGR_pAT_397 hypothetical protein gene gene4725 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4670 Amir_4671 Amir_4671 Amir_4671 5557876 5558739 + Luciferase-like monooxygenase PFAM: Luciferase-like monooxygenase~KEGG: bcj:BCAM1565 putative monooxygenase gene gene4726 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4671 Amir_4672 Amir_4672 Amir_4672 5558860 5559504 + conserved hypothetical protein KEGG: sun:SUN_0435 hypothetical protein gene gene4727 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4672 Amir_4673 Amir_4673 Amir_4673 5559679 5560674 + lipolytic protein G-D-S-L family PFAM: lipolytic protein G-D-S-L family~KEGG: hypothetical protein gene gene4728 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4673 Amir_4674 Amir_4674 Amir_4674 5560676 5561680 + lipolytic protein G-D-S-L family PFAM: lipolytic protein G-D-S-L family~KEGG: scl:sce5722 endo-1%2C4-beta-glucanase gene gene4729 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4674 Amir_4675 Amir_4675 Amir_4675 5561700 5561861 + hypothetical protein gene gene4730 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4675 Amir_4676 Amir_4676 Amir_4676 5561862 5562215 - hypothetical protein KEGG: scl:sce8365 hypothetical protein gene gene4731 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4676 Amir_4677 Amir_4677 Amir_4677 5562291 5562440 - hypothetical protein gene gene4732 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4677 Amir_4678 Amir_4678 Amir_4678 5562458 5563105 + hypothetical protein KEGG: abo:ABO_1927 hypothetical protein gene gene4733 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4678 Amir_4679 Amir_4679 Amir_4679 5563107 5564879 - serine/threonine protein kinase PFAM: Serine/threonine protein kinase-related%3B tyrosine protein kinase%3B aminoglycoside phosphotransferase~SMART: serine/threonine protein kinase%3B tyrosine protein kinase~KEGG: mxa:MXAN_5176 serine/threonine protein kinase gene gene4734 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4679 Amir_4680 Amir_4680 Amir_4680 5565038 5565852 - pseudogene gene4735 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4680 Amir_4681 Amir_4681 Amir_4681 5565925 5566548 + pseudogene gene4736 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4681 Amir_4682 Amir_4682 Amir_4682 5566698 5568479 + cellulose-binding family II PFAM: cellulose-binding family II~SMART: cellulose-binding family II~KEGG: ccs:CCNA_03254 pectate lyase gene gene4737 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4682 Amir_4683 Amir_4683 Amir_4683 5568526 5569683 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: cvi:CV_0711 TetR family transcriptional regulator gene gene4738 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4683 Amir_4684 Amir_4684 Amir_4684 5569905 5571485 + AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: eba:ebA2050 putative ADP-producing CoA ligase%2C feruloyl-CoA synthetase gene gene4739 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4684 Amir_4685 Amir_4685 Amir_4685 5571598 5573214 - aldehyde dehydrogenase PFAM: Aldehyde Dehydrogenase~KEGG: sus:Acid_1786 succinic semialdehyde dehydrogenase gene gene4740 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4685 Amir_4686 Amir_4686 Amir_4686 5573387 5574598 + hypothetical protein KEGG: scl:sce5500 hypothetical protein gene gene4741 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4686 Amir_4687 Amir_4687 Amir_4687 5574765 5575886 + Serine-type D-Ala-D-Ala carboxypeptidase PFAM: beta-lactamase~KEGG: scl:sce3869 hypothetical protein gene gene4742 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4687 Amir_4688 Amir_4688 Amir_4688 5575877 5577136 + histidine kinase PFAM: histidine kinase dimerization and phosphoacceptor region%3B ATP-binding region ATPase domain protein~SMART: ATP-binding region ATPase domain protein~KEGG: bme:BMEI1583 sensor protein DegS gene gene4743 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4688 Amir_4689 Amir_4689 Amir_4689 5577124 5577774 + two component transcriptional regulator%2C LuxR family PFAM: response regulator receiver%3B regulatory protein LuxR%3B Sigma-70 region 4 type 2~SMART: regulatory protein LuxR%3B response regulator receiver~KEGG: bsu:BSU08300 hypothetical protein gene gene4744 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4689 Amir_4690 Amir_4690 Amir_4690 5577789 5577884 + hypothetical protein gene gene4745 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4690 Amir_4691 Amir_4691 Amir_4691 5577939 5579090 - Serine-type D-Ala-D-Ala carboxypeptidase PFAM: beta-lactamase~KEGG: scl:sce3868 alkaline D-peptidase gene gene4746 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4691 Amir_4692 Amir_4692 Amir_4692 5579180 5580208 - hypothetical protein KEGG: eba:ebA5037 hypothetical protein gene gene4747 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4692 Amir_4693 Amir_4693 Amir_4693 5580423 5581085 + chitin-binding domain 3 protein PFAM: chitin-binding domain 3 protein~KEGG: cvi:CV_0554 carbohydrate-binding protein gene gene4748 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4693 Amir_4694 Amir_4694 Amir_4694 5581888 5584389 + transcriptional regulator%2C SARP family PFAM: transcriptional activator domain%3B transcriptional regulator domain protein~KEGG: sme:SMa0464 adenylate/guanylate cyclase gene gene4749 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4694 Amir_4695 Amir_4695 Amir_4695 5584548 5586101 + aminotransferase class-III PFAM: aminotransferase class-III~KEGG: ppu:PP_2782 pyridoxalphosphate dependent aminotransferase%2C class III gene gene4750 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4695 Amir_4696 Amir_4696 Amir_4696 5586098 5587270 + acyl-CoA dehydrogenase domain protein PFAM: acyl-CoA dehydrogenase domain protein~KEGG: bsu:BSU18260 hypothetical protein gene gene4751 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4696 Amir_4697 Amir_4697 Amir_4697 5587362 5587769 - conserved hypothetical protein KEGG: pap:PSPA7_2619 hypothetical protein gene gene4752 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4697 Amir_4698 Amir_4698 Amir_4698 5587851 5594192 - thioester reductase domain protein TIGRFAM: thioester reductase domain protein~PFAM: Male sterility domain%3B short-chain dehydrogenase/reductase SDR%3B Beta-ketoacyl synthase%3B 3- beta hydroxysteroid dehydrogenase/isomerase%3B Acyl transferase%3B KR domain protein%3B Erythronolide synthase docking%3B phosphopantetheine-binding%3B NAD-dependent epimerase/dehydratase~KEGG: pst:PSPTO_4687 coronafacic acid polyketide synthetase II gene gene4753 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4698 Amir_4699 Amir_4699 Amir_4699 5594239 5606481 - Mycocerosate synthase.%2C Erythronolide synthase PFAM: Acyl transferase%3B short-chain dehydrogenase/reductase SDR%3B Beta-ketoacyl synthase%3B KR domain protein%3B phosphopantetheine-binding~KEGG: met:M446_0170 beta-ketoacyl synthase gene gene4754 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4699 Amir_4700 Amir_4700 Amir_4700 5606723 5607262 + flavin reductase domain protein FMN-binding PFAM: flavin reductase domain protein FMN-binding~KEGG: bpy:Bphyt_1723 flavin reductase domain protein FMN-binding gene gene4755 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4700 Amir_4701 Amir_4701 Amir_4701 5607479 5608024 + pyridoxamine 5'-phosphate oxidase-related FMN- binding PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding gene gene4756 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4701 Amir_4702 Amir_4702 Amir_4702 5608166 5609017 - NmrA family protein PFAM: NmrA family protein~KEGG: afw:Anae109_3754 NmrA family protein gene gene4757 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4702 Amir_4703 Amir_4703 Amir_4703 5609217 5610398 - acyl-CoA dehydrogenase type 2 domain protein PFAM: Acyl-CoA dehydrogenase type 2 domain~KEGG: rsh:Rsph17029_3744 acyl-CoA dehydrogenase type 2 gene gene4758 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4703 Amir_4704 Amir_4704 Amir_4704 5610713 5612149 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: transporter protein gene gene4759 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4704 Amir_4705 Amir_4705 Amir_4705 5612274 5612720 + transcriptional regulator%2C HxlR family PFAM: helix-turn-helix HxlR type~KEGG: hypothetical protein gene gene4760 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4705 Amir_4706 Amir_4706 Amir_4706 5612783 5613184 - conserved hypothetical protein KEGG: pap:PSPA7_2619 hypothetical protein gene gene4761 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4706 Amir_4707 Amir_4707 Amir_4707 5613245 5614432 - acyl-CoA dehydrogenase type 2 domain protein PFAM: Acyl-CoA dehydrogenase type 2 domain%3B acyl- CoA dehydrogenase domain protein~KEGG: rlt:Rleg2_5725 acyl-CoA dehydrogenase type 2 domain gene gene4762 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4707 Amir_4708 Amir_4708 Amir_4708 5614664 5615083 + hypothetical protein KEGG: sus:Acid_5966 hypothetical protein gene gene4763 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4708 Amir_4709 Amir_4709 Amir_4709 5615253 5615618 + hypothetical protein KEGG: aav:Aave_2096 transcriptional regulator%2C ArsR family gene gene4764 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4709 Amir_4710 Amir_4710 Amir_4710 5615801 5617315 - TAP domain protein PFAM: TAP domain protein%3B alpha/beta hydrolase fold~KEGG: sde:Sde_0644 hypothetical protein gene gene4765 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4710 Amir_4711 Amir_4711 Amir_4711 5617627 5619573 - ATP-dependent endonuclease of the OLD family- like protein KEGG: rme:Rmet_4641 ATP-dependent endonuclease of the OLD family-like protein gene gene4766 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4711 Amir_4712 Amir_4712 Amir_4712 5619780 5622425 - protein of unknown function DUF1680 PFAM: protein of unknown function DUF1680~KEGG: hypothetical protein gene gene4767 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4712 Amir_4713 Amir_4713 Amir_4713 5622422 5623783 - Xaa-Pro aminopeptidase PFAM: peptidase M24%3B peptidase M24B X-Pro dipeptidase/aminopeptidase domain protein~KEGG: scl:sce8667 hypothetical protein gene gene4768 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4713 Amir_4714 Amir_4714 Amir_4714 5623794 5625113 - alpha/beta hydrolase fold protein PFAM: alpha/beta hydrolase fold~KEGG: rle:pRL100270 putative proline iminopeptidase gene gene4769 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4714 Amir_4715 Amir_4715 Amir_4715 5625110 5626090 - ABC transporter related PFAM: ABC transporter related%3B Oligopeptide/dipeptide ABC transporter domain protein~SMART: AAA ATPase~KEGG: dol:Dole_0940 oligopeptide/dipeptide ABC transporter%2C ATPase subunit gene gene4770 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4715 Amir_4716 Amir_4716 Amir_4716 5626087 5626902 - ABC transporter related PFAM: ABC transporter related%3B Oligopeptide/dipeptide ABC transporter domain protein~SMART: AAA ATPase~KEGG: bja:bll2870 ABC transporter ATP-binding protein gene gene4771 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4716 Amir_4717 Amir_4717 Amir_4717 5626899 5627897 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: peptide transport system permease protein%3B K02033 peptide/nickel transport system permease protein gene gene4772 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4717 Amir_4718 Amir_4718 Amir_4718 5627894 5628850 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: gme:Gmet_1236 binding-protein dependent transport system inner membrane protein gene gene4773 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4718 Amir_4719 Amir_4719 Amir_4719 5628855 5630549 - 4-phytase PFAM: extracellular solute-binding protein family 5~KEGG: rle:pRL110448 putative substrate-binding ABC transporter protein gene gene4774 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4719 Amir_4720 Amir_4720 Amir_4720 5631077 5631748 - transcriptional regulator%2C GntR family PFAM: GntR domain protein%3B regulatory protein GntR HTH~SMART: regulatory protein GntR HTH~KEGG: bbr:BB0470 GntR family transcriptional regulator gene gene4775 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4720 Amir_4721 Amir_4721 Amir_4721 5631866 5633239 - aldehyde dehydrogenase PFAM: Aldehyde Dehydrogenase~KEGG: ccs:CCNA_02881 oxoglutarate semialdehyde dehydrogenase gene gene4776 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4721 Amir_4722 Amir_4722 Amir_4722 5633250 5634251 - proline racemase PFAM: proline racemase~KEGG: bat:BAS2643 proline racemase%2C putative gene gene4777 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4722 Amir_4723 Amir_4723 Amir_4723 5634253 5635185 - dihydrodipicolinate synthetase PFAM: dihydrodipicolinate synthetase~KEGG: swd:Swoo_2822 dihydrodipicolinate synthetase gene gene4778 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4723 Amir_4724 Amir_4724 Amir_4724 5635182 5636585 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase%3B BFD domain protein [2Fe-2S]-binding domain protein%3B fumarate reductase/succinate dehydrogenase flavoprotein domain protein~KEGG: bph:Bphy_4670 FAD-dependent pyridine nucleotide-disulphide oxidoreductase gene gene4779 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4724 Amir_4725 Amir_4725 Amir_4725 5636578 5636835 - FAD dependent oxidoreductase KEGG: vei:Veis_0721 FAD dependent oxidoreductase gene gene4780 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4725 Amir_4726 Amir_4726 Amir_4726 5636832 5638001 - FAD dependent oxidoreductase PFAM: FAD dependent oxidoreductase~KEGG: bce:BC2836 sarcosine oxidase beta subunit gene gene4781 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4726 Amir_4727 Amir_4727 Amir_4727 5638415 5638918 - hypothetical protein gene gene4782 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4727 Amir_4728 Amir_4728 Amir_4728 5639694 5640359 + deoxyribose-phosphate aldolase KEGG: rru:Rru_A2303 deoxyribose-phosphate aldolase~TIGRFAM: deoxyribose-phosphate aldolase~PFAM: deoxyribose-phosphate aldolase/phospho-2- dehydro-3-deoxyheptonate aldolase gene gene4783 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4728 Amir_4729 Amir_4729 Amir_4729 5640505 5641533 + transcriptional regulator%2C LacI family PFAM: periplasmic binding protein/LacI transcriptional regulator~SMART: regulatory protein LacI~KEGG: bac:BamMC406_6022 LacI family transcription regulator gene gene4784 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4729 Amir_4730 Amir_4730 Amir_4730 5641562 5642863 + pyrimidine-nucleoside phosphorylase KEGG: afw:Anae109_0662 pyrimidine-nucleoside phosphorylase~TIGRFAM: pyrimidine-nucleoside phosphorylase~PFAM: glycosyl transferase family 3%3B Pyrimidine nucleoside phosphorylase domain%3B Glycosyl transferase%2C family 3-like gene gene4785 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4730 Amir_4731 Amir_4731 Amir_4731 5643007 5644479 + amidohydrolase PFAM: amidohydrolase%3B Amidohydrolase 3~KEGG: scl:sce1158 hypothetical protein gene gene4786 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4731 Amir_4732 Amir_4732 Amir_4732 5644553 5645908 - Endo-1%2C4-beta-xylanase KEGG: glycosyl hydrolase family 10 protein~PFAM: glycoside hydrolase family 10%3B cellulose- binding family II~SMART: glycoside hydrolase family 10%3B cellulose- binding family II gene gene4787 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4732 Amir_4733 Amir_4733 Amir_4733 5646080 5646982 - hypothetical protein gene gene4788 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4733 Amir_4734 Amir_4734 Amir_4734 5647196 5647891 + hypothetical protein gene gene4789 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4734 Amir_4735 Amir_4735 Amir_4735 5647888 5648655 + conserved hypothetical protein KEGG: ade:Adeh_2319 hypothetical protein gene gene4790 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4735 Amir_4736 Amir_4736 Amir_4736 5648980 5649348 + pseudogene gene4791 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4736 Amir_4737 Amir_4737 Amir_4737 5649397 5649846 - hypothetical protein KEGG: pzu:PHZ_c0663 type II secretion system protein N gene gene4792 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4737 Amir_4738 Amir_4738 Amir_4738 5649849 5651000 - hypothetical protein KEGG: smd:Smed_1835 hypothetical protein gene gene4793 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4738 Amir_4739 Amir_4739 Amir_4739 5651000 5651296 - hypothetical protein gene gene4794 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4739 Amir_4740 Amir_4740 Amir_4740 5651559 5652407 - hypothetical protein KEGG: ank:AnaeK_3866 hypothetical protein gene gene4795 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4740 Amir_4741 Amir_4741 Amir_4741 5652530 5653096 - hypothetical protein KEGG: pna:Pnap_3074 hypothetical protein gene gene4796 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4741 Amir_4742 Amir_4742 Amir_4742 5653093 5654448 - hypothetical protein KEGG: ank:AnaeK_1466 hypothetical protein gene gene4797 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4742 Amir_4743 Amir_4743 Amir_4743 5654448 5655251 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: mmr:Mmar10_2631 ABC transporter related gene gene4798 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4743 Amir_4744 Amir_4744 Amir_4744 5655401 5656192 - hypothetical protein KEGG: mpo:Mpop_3497 integral membrane protein MviN gene gene4799 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4744 Amir_4745 Amir_4745 Amir_4745 5656189 5656740 - RNA polymerase%2C sigma-24 subunit%2C ECF subfamily TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family~PFAM: Sigma-70 region 4 type 2%3B sigma-70 region 2 domain protein%3B sigma-70 region 4 domain protein~KEGG: pla:Plav_1868 RNA polymerase sigma factor RpoE gene gene4800 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4745 Amir_4746 Amir_4746 Amir_4746 5656977 5657804 - hypothetical protein KEGG: rme:Rmet_3224 TM1410 hypothetical-related protein gene gene4801 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4746 Amir_4747 Amir_4747 Amir_4747 5657961 5659394 - NAD(P)(+) transhydrogenase (AB-specific) PFAM: NAD(P) transhydrogenase beta subunit~KEGG: abo:ABO_1327 pyridine nucleotide transhydrogenase%2C B subunit gene gene4802 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4747 Amir_4748 Amir_4748 Amir_4748 5659391 5659765 - NAD/NADP transhydrogenase alpha subunit-like protein KEGG: afw:Anae109_2972 pyridine nucleotide transhydrogenase alpha subunit-like protein gene gene4803 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4748 Amir_4749 Amir_4749 Amir_4749 5659765 5660886 - alanine dehydrogenase/PNT domain protein PFAM: alanine dehydrogenase/PNT domain protein~KEGG: tgr:Tgr7_0268 NAD(P)(+) transhydrogenase (AB- specific) gene gene4804 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4749 Amir_4750 Amir_4750 Amir_4750 5661119 5661763 - GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: sus:Acid_0202 hypothetical protein gene gene4805 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4750 Amir_4751 Amir_4751 Amir_4751 5661779 5662504 - conserved hypothetical protein KEGG: bha:BH0230 hypothetical protein gene gene4806 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4751 Amir_4752 Amir_4752 Amir_4752 5662504 5663871 - Nitrite reductase (NO-forming) PFAM: multicopper oxidase type 3%3B multicopper oxidase type 2~KEGG: oca:OCAR_7249 copper-containing nitrite reductase gene gene4807 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4752 Amir_4753 Amir_4753 Amir_4753 5663868 5665109 - hypothetical protein KEGG: tbd:Tbd_2176 hypothetical protein gene gene4808 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4753 Amir_4754 Amir_4754 Amir_4754 5665106 5666188 - conserved hypothetical protein KEGG: dar:Daro_3949 hypothetical protein gene gene4809 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4754 Amir_4755 Amir_4755 Amir_4755 5666188 5666874 - putative transcriptional regulator KEGG: ank:AnaeK_1843 SpoIID/LytB domain protein gene gene4810 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4755 Amir_4756 Amir_4756 Amir_4756 5666935 5668914 - peptidase M48 Ste24p PFAM: peptidase M48 Ste24p~KEGG: acp:A2cp1_3025 peptidase M48 Ste24p gene gene4811 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4756 Amir_4757 Amir_4757 Amir_4757 5668904 5669356 - ubiquinol-cytochrome c chaperone KEGG: pla:Plav_2920 ubiquinol-cytochrome c chaperone gene gene4812 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4757 Amir_4758 Amir_4758 Amir_4758 5669632 5672106 + peptidase M14 carboxypeptidase A PFAM: peptidase M14 carboxypeptidase A~SMART: peptidase M14 carboxypeptidase A~KEGG: bba:Bd3234 carboxypeptidase T precursor gene gene4813 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4758 Amir_4759 Amir_4759 Amir_4759 5672231 5672353 - hypothetical protein gene gene4814 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4759 Amir_4760 Amir_4760 Amir_4760 5672456 5672983 + Calcium-binding EF-hand-containing protein SMART: Calcium-binding EF-hand-containing protein~KEGG: Hypothetical protein CBG02402 gene gene4815 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4760 Amir_4761 Amir_4761 Amir_4761 5672987 5673928 + methyltransferase TIGRFAM: methyltransferase~PFAM: O-methyltransferase domain protein~KEGG: bur:Bcep18194_B1573 protein of unknown function Mtu_121 gene gene4816 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4761 Amir_4762 Amir_4762 Amir_4762 5674008 5674184 + transposase%2C IS4 family protein KEGG: bvi:Bcep1808_5626 transposase%2C IS4 family protein gene gene4817 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4762 Amir_4763 Amir_4763 Amir_4763 5674234 5674683 - DoxX family protein PFAM: DoxX family protein~KEGG: scl:sce3628 hypothetical protein gene gene4818 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4763 Amir_4764 Amir_4764 Amir_4764 5674880 5675425 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: met:M446_2111 TetR family transcriptional regulator gene gene4819 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4764 Amir_4765 Amir_4765 Amir_4765 5675864 5679514 + hypothetical protein KEGG: dar:Daro_3601 hypothetical protein gene gene4820 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4765 Amir_4766 Amir_4766 Amir_4766 5679495 5680073 + hypothetical protein gene gene4821 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4766 Amir_4767 Amir_4767 Amir_4767 5680231 5680680 - pseudogene gene4822 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4767 Amir_4768 Amir_4768 Amir_4768 5680797 5682326 + periplasmic solute binding protein PFAM: periplasmic solute binding protein~KEGG: bra:BRADO6268 ABC transporter substrate- binding protein gene gene4823 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4768 Amir_4769 Amir_4769 Amir_4769 5682314 5683150 + hypothetical protein KEGG: GK21128 gene product from transcript GK21128- RA gene gene4824 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4769 Amir_4770 Amir_4770 Amir_4770 5683143 5683895 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: bcz:pE33L54_0038 manganese ABC transporter%2C ATP-binding protein gene gene4825 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4770 Amir_4771 Amir_4771 Amir_4771 5683892 5684755 + ABC-3 protein PFAM: ABC-3 protein~KEGG: bha:BH1390 hypothetical protein gene gene4826 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4771 Amir_4772 Amir_4772 Amir_4772 5684723 5685838 - hypothetical protein KEGG: pin:Ping_0445 colicin uptake-like protein gene gene4827 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4772 Amir_4773 Amir_4773 Amir_4773 5685907 5687040 - cobalamin synthesis protein P47K PFAM: cobalamin synthesis protein P47K%3B cobalamin synthesis CobW domain protein~KEGG: cko:CKO_00925 hypothetical protein gene gene4828 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4773 Amir_4774 Amir_4774 Amir_4774 5687063 5688067 - protein of unknown function DUF916 cell surface putative PFAM: protein of unknown function DUF916 cell surface putative~KEGG: bcj:BCAM2172 putative patatin-like phospholipase gene gene4829 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4774 Amir_4775 Amir_4775 Amir_4775 5688166 5689644 - hypothetical protein KEGG: mno:Mnod_2545 hypothetical protein gene gene4830 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4775 Amir_4776 Amir_4776 Amir_4776 5689751 5691541 - hypothetical protein KEGG: similar to mucin 2%3B K10955 intestinal mucin- 2 gene gene4831 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4776 Amir_4777 Amir_4777 Amir_4777 5691749 5692993 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: yen:YE2035 putative membrane transport protein gene gene4832 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4777 Amir_4778 Amir_4778 Amir_4778 5693219 5693950 + methyltransferase small PFAM: methyltransferase small~KEGG: rpe:RPE_0637 methyltransferase small gene gene4833 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4778 Amir_4779 Amir_4779 Amir_4779 5693947 5694759 + hypothetical protein KEGG: pca:Pcar_1737 hypothetical protein gene gene4834 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4779 Amir_4780 Amir_4780 Amir_4780 5694815 5695750 + GHMP kinase PFAM: GHMP kinase~KEGG: mlo:mlr9540 hypothetical protein gene gene4835 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4780 Amir_4781 Amir_4781 Amir_4781 5695829 5696833 + Pyridoxal-5'-phosphate-dependent protein beta subunit PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit~KEGG: bpd:BURPS668_2001 cysteine synthase gene gene4836 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4781 Amir_4782 Amir_4782 Amir_4782 5696891 5697874 - periplasmic binding protein PFAM: periplasmic binding protein~KEGG: ABC transporter substrate binding protein (iron)%3B K02016 iron complex transport system substrate-binding protein gene gene4837 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4782 Amir_4783 Amir_4783 Amir_4783 5697871 5698662 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: bcj:BCAL1346 putative Fe uptake system ATP- binding protein gene gene4838 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4783 Amir_4784 Amir_4784 Amir_4784 5698659 5699720 - transport system permease protein PFAM: transport system permease protein~KEGG: dac:Daci_3791 transport system permease protein gene gene4839 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4784 Amir_4785 Amir_4785 Amir_4785 5699850 5700653 + Methyltransferase type 11 PFAM: Methyltransferase type 11%3B UbiE/COQ5 methyltransferase%3B Methyltransferase type 12~KEGG: mca:MCA3003 UbiE/COQ5 family methlytransferase gene gene4840 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4785 Amir_4786 Amir_4786 Amir_4786 5700763 5701332 - regulatory protein TetR PFAM: regulatory protein TetR~KEGG: rec:RHECIAT_CH0000638 probable transcriptional regulator protein%2C TetR family gene gene4841 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4786 Amir_4787 Amir_4787 Amir_4787 5701370 5702920 - Amidase PFAM: Amidase~KEGG: bpt:Bpet1417 glutamyl-tRNA(Gln) amidotransferase subunit A gene gene4842 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4787 Amir_4788 Amir_4788 Amir_4788 5703027 5703911 + beta-lactamase domain protein PFAM: beta-lactamase domain protein~KEGG: rpt:Rpal_4911 beta-lactamase domain protein gene gene4843 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4788 Amir_4789 Amir_4789 Amir_4789 5704118 5705599 + methyl-accepting chemotaxis sensory transducer PFAM: chemotaxis sensory transducer~SMART: chemotaxis sensory transducer~KEGG: aba:Acid345_1672 methyl-accepting chemotaxis sensory transducer gene gene4844 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4789 Amir_4790 Amir_4790 Amir_4790 5705681 5706631 - DNA topoisomerase IB KEGG: reh:H16_A1489 DNA topoisomerase IB gene gene4845 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4790 Amir_4791 Amir_4791 Amir_4791 5706727 5707599 - transcriptional regulator%2C LysR family PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: pag:PLES_56121 putative transcriptional regulator gene gene4846 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4791 Amir_4792 Amir_4792 Amir_4792 5707723 5708448 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B KR domain protein~KEGG: sus:Acid_6073 short-chain dehydrogenase/reductase SDR gene gene4847 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4792 Amir_4793 Amir_4793 Amir_4793 5708448 5709302 + amidohydrolase 2 PFAM: amidohydrolase 2~KEGG: hypothetical protein%3B K07046 gene gene4848 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4793 Amir_4794 Amir_4794 Amir_4794 5709312 5709875 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: ank:AnaeK_1572 regulatory protein TetR gene gene4849 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4794 Amir_4795 Amir_4795 Amir_4795 5709954 5710847 + NAD-dependent epimerase/dehydratase PFAM: NAD-dependent epimerase/dehydratase%3B Male sterility domain~KEGG: acp:A2cp1_1649 NAD-dependent epimerase/dehydratase gene gene4850 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4795 Amir_4796 Amir_4796 Amir_4796 5710939 5712210 + protein of unknown function DUF395 YeeE/YedE PFAM: protein of unknown function DUF395 YeeE/YedE~KEGG: par:Psyc_1255 TolB periplamsic protein gene gene4851 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4796 Amir_4797 Amir_4797 Amir_4797 5712273 5712413 - pseudogene gene4852 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4797 Amir_4798 Amir_4798 Amir_4798 5712680 5712907 + hypothetical protein gene gene4853 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4798 Amir_4799 Amir_4799 Amir_4799 5712998 5714431 + monooxygenase FAD-binding PFAM: monooxygenase FAD-binding~KEGG: pde:Pden_3048 hypothetical protein gene gene4854 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4799 Amir_4800 Amir_4800 Amir_4800 5714472 5717240 - transcriptional regulator%2C winged helix family PFAM: transcriptional regulator domain protein%3B transcriptional activator domain~KEGG: afw:Anae109_3667 ATPase-like protein gene gene4855 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4800 Amir_4801 Amir_4801 Amir_4801 5717369 5718139 - SNARE associated Golgi protein PFAM: SNARE associated Golgi protein~KEGG: gdi:GDI1794 hypothetical protein gene gene4856 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4801 Amir_4802 Amir_4802 Amir_4802 5718169 5719695 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: pol:Bpro_1369 major facilitator superfamily MFS_1 gene gene4857 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4802 Amir_4803 Amir_4803 Amir_4803 5719816 5720397 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: bac:BamMC406_5866 TetR family transcriptional regulator gene gene4858 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4803 Amir_4804 Amir_4804 Amir_4804 5720384 5720989 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: sml:Smlt4073 putative TetR family regulatory protein gene gene4859 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4804 Amir_4805 Amir_4805 Amir_4805 5721051 5721557 - hypothetical protein KEGG: afw:Anae109_0991 major facilitator transporter gene gene4860 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4805 Amir_4806 Amir_4806 Amir_4806 5721662 5724019 - coagulation factor 5/8 type domain protein PFAM: coagulation factor 5/8 type domain protein~KEGG: hypothetical protein gene gene4861 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4806 Amir_4807 Amir_4807 Amir_4807 5724121 5724600 - conserved hypothetical protein KEGG: mxa:MXAN_2741 hypothetical protein gene gene4862 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4807 Amir_4808 Amir_4808 Amir_4808 5724696 5725592 - Nucleoside-diphosphate-sugar epimerase-like protein KEGG: swi:Swit_3769 NAD-dependent epimerase/dehydratase gene gene4863 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4808 Amir_4809 Amir_4809 Amir_4809 5725666 5726325 - restriction endonuclease PFAM: restriction endonuclease~KEGG: acr:Acry_3352 restriction endonuclease gene gene4864 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4809 Amir_4810 Amir_4810 Amir_4810 5726704 5726976 - hypothetical protein gene gene4865 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4810 Amir_4811 Amir_4811 Amir_4811 5727628 5730831 + putative signal transduction protein with Nacht domain KEGG: pmy:Pmen_1048 signal transduction protein gene gene4866 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4811 Amir_4812 Amir_4812 Amir_4812 5731126 5732466 - cytochrome P450-family protein KEGG: mlo:mll6125 cytochrome P450-family protein gene gene4867 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4812 Amir_4813 Amir_4813 Amir_4813 5732463 5733071 - protein of unknown function ATP binding PFAM: protein of unknown function ATP binding~KEGG: dac:Daci_0776 protein of unknown function ATP binding gene gene4868 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4813 Amir_4814 Amir_4814 Amir_4814 5733052 5733453 - protein of unknown function DUF742 PFAM: protein of unknown function DUF742 gene gene4869 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4814 Amir_4815 Amir_4815 Amir_4815 5733450 5733869 - Roadblock/LC7 family protein PFAM: Roadblock/LC7 family protein gene gene4870 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4815 Amir_4816 Amir_4816 Amir_4816 5734002 5735894 - ATP-binding region ATPase domain protein PFAM: ATP-binding region ATPase domain protein~SMART: ATP-binding region ATPase domain protein~KEGG: hypothetical protein gene gene4871 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4816 Amir_4817 Amir_4817 Amir_4817 5736441 5737106 + hypothetical protein KEGG: ppw:PputW619_3130 hypothetical protein gene gene4872 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4817 Amir_4818 Amir_4818 Amir_4818 5737156 5738241 - oxidoreductase domain protein PFAM: oxidoreductase domain protein%3B Oxidoreductase domain~KEGG: atc:AGR_L_1778 hypothetical protein gene gene4873 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4818 Amir_4819 Amir_4819 Amir_4819 5738238 5738957 - Cupin 2 conserved barrel domain protein PFAM: Cupin 2 conserved barrel domain protein gene gene4874 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4819 Amir_4820 Amir_4820 Amir_4820 5738954 5739856 - hypothetical protein KEGG: sus:Acid_2874 transmembrane prediction gene gene4875 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4820 Amir_4821 Amir_4821 Amir_4821 5740013 5741146 + glycerate kinase KEGG: spe:Spro_1142 glycerate kinase~TIGRFAM: glycerate kinase~PFAM: glycerate kinase gene gene4876 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4821 Amir_4822 Amir_4822 Amir_4822 5741267 5742052 - Xylose isomerase domain protein TIM barrel PFAM: Xylose isomerase domain protein TIM barrel~KEGG: hypothetical protein gene gene4877 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4822 Amir_4823 Amir_4823 Amir_4823 5742161 5742889 + hypothetical protein KEGG: ilo:IL1495 hypothetical protein gene gene4878 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4823 Amir_4824 Amir_4824 Amir_4824 5742911 5743837 - transcriptional regulator%2C LysR family PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: pol:Bpro_4368 transcriptional regulator%2C LysR family gene gene4879 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4824 Amir_4825 Amir_4825 Amir_4825 5743899 5745239 + aminotransferase class-III PFAM: aminotransferase class-III~KEGG: bxe:Bxe_B2675 aminotransferase gene gene4880 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4825 Amir_4826 Amir_4826 Amir_4826 5745630 5746193 + hypothetical protein KEGG: rsq:Rsph17025_0144 chromosome segregation protein SMC gene gene4881 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4826 Amir_4827 Amir_4827 Amir_4827 5746691 5747029 - hypothetical protein gene gene4882 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4827 Amir_4828 Amir_4828 Amir_4828 5747669 5749399 + Ricin B lectin PFAM: Ricin B lectin~SMART: Ricin B lectin~KEGG: bha:BH0494 exopolygalacturonate lyase gene gene4883 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4828 Amir_4829 Amir_4829 Amir_4829 5749479 5749982 - hypothetical protein gene gene4884 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4829 Amir_4830 Amir_4830 Amir_4830 5750210 5750569 - hypothetical protein KEGG: rfr:Rfer_3942 serine/threonine protein kinase with CHASE2 sensor gene gene4885 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4830 Amir_4831 Amir_4831 Amir_4831 5750918 5751523 - hypothetical protein KEGG: YALI0B22110p gene gene4886 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4831 Amir_4832 Amir_4832 Amir_4832 5751527 5752615 - hypothetical protein KEGG: hypothetical protein gene gene4887 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4832 Amir_4833 Amir_4833 Amir_4833 5753248 5753793 - protein of unknown function DUF1697 PFAM: protein of unknown function DUF1697~KEGG: cak:Caul_2927 hypothetical protein gene gene4888 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4833 Amir_4834 Amir_4834 Amir_4834 5754258 5755592 + cytochrome P450 PFAM: cytochrome P450~KEGG: mxa:MXAN_2304 cytochrome P450 family protein gene gene4889 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4834 Amir_4835 Amir_4835 Amir_4835 5755642 5757402 + hypothetical protein KEGG: Eln%3B elastin gene gene4890 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4835 Amir_4836 Amir_4836 Amir_4836 5757488 5758222 - glycosyl transferase family 2 PFAM: glycosyl transferase family 2~KEGG: gbm:Gbem_1276 glycosyl transferase family 2 gene gene4891 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4836 Amir_4837 Amir_4837 Amir_4837 5758355 5758945 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: msl:Msil_3313 transcriptional regulator%2C TetR family gene gene4892 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4837 Amir_4838 Amir_4838 Amir_4838 5758972 5759886 - NmrA family protein PFAM: NmrA family protein~KEGG: scl:sce0707 hypothetical protein gene gene4893 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4838 Amir_4839 Amir_4839 Amir_4839 5760076 5760786 + hypothetical protein KEGG: bcr:BCAH187_A3347 hypothetical protein gene gene4894 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4839 Amir_4840 Amir_4840 Amir_4840 5760929 5761150 - hypothetical protein gene gene4895 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4840 Amir_4841 Amir_4841 Amir_4841 5761240 5762571 - Sterol 3-beta-glucosyltransferase PFAM: glycosyl transferase family 28~KEGG: afw:Anae109_0485 glycosyl transferase family protein gene gene4896 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4841 Amir_4842 Amir_4842 Amir_4842 5762568 5764670 - peptidase S9 prolyl oligopeptidase active site domain protein PFAM: peptidase S9 prolyl oligopeptidase active site domain protein%3B peptidase S9A prolyl oligopeptidase domain protein beta-propeller~KEGG: scl:sce8590 prolyl oligopeptidase gene gene4897 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4842 Amir_4843 Amir_4843 Amir_4843 5764674 5765699 - NAD-dependent epimerase/dehydratase PFAM: NAD-dependent epimerase/dehydratase%3B Male sterility domain%3B 3-beta hydroxysteroid dehydrogenase/isomerase%3B polysaccharide biosynthesis protein CapD%3B dTDP-4-dehydrorhamnose reductase%3B short- chain dehydrogenase/reductase SDR~KEGG: ppd:Ppro_3571 NAD-dependent epimerase/dehydratase gene gene4898 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4843 Amir_4844 Amir_4844 Amir_4844 5765696 5767000 - Sterol 3-beta-glucosyltransferase PFAM: glycosyl transferase family 28~KEGG: afw:Anae109_0485 glycosyl transferase family protein gene gene4899 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4844 Amir_4845 Amir_4845 Amir_4845 5767060 5768277 - cytochrome P450 PFAM: cytochrome P450~KEGG: scl:sce8913 cytochrome P450 CYP109C2 gene gene4900 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4845 Amir_4846 Amir_4846 Amir_4846 5768374 5768466 - hypothetical protein gene gene4901 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4846 Amir_4847 Amir_4847 Amir_4847 5768520 5768618 - hypothetical protein gene gene4902 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4847 Amir_4848 Amir_4848 Amir_4848 5768650 5771292 - serine/threonine protein kinase PFAM: Lanthionine synthetase C family protein%3B aminoglycoside phosphotransferase~SMART: serine/threonine protein kinase~KEGG: smt:Smal_2130 serine/threonine protein kinase gene gene4903 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4848 Amir_4849 Amir_4849 Amir_4849 5771450 5772061 - flavoprotein PFAM: flavoprotein~KEGG: tgr:Tgr7_0102 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase gene gene4904 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4849 Amir_4850 Amir_4850 Amir_4850 5772058 5772672 - MaoC domain protein dehydratase PFAM: MaoC domain protein dehydratase~KEGG: reu:Reut_A1571 MaoC-like dehydratase gene gene4905 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4850 Amir_4851 Amir_4851 Amir_4851 5772677 5773441 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: mxa:MXAN_6034 enoyl-(acyl carrier protein) reductase gene gene4906 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4851 Amir_4852 Amir_4852 Amir_4852 5773446 5774150 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B KR domain protein~KEGG: tbd:Tbd_1549 3-oxoacyl-[acyl-carrier-protein] reductase gene gene4907 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4852 Amir_4853 Amir_4853 Amir_4853 5774147 5779606 - Acyl transferase PFAM: Acyl transferase%3B Beta-ketoacyl synthase%3B KR domain protein%3B short-chain dehydrogenase/reductase SDR%3B phosphopantetheine-binding~KEGG: mxa:MXAN_4528 polyketide synthase gene gene4908 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4853 Amir_4854 Amir_4854 Amir_4854 5779603 5780362 - pseudogene gene4909 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4854 Amir_4855 Amir_4855 Amir_4855 5780990 5781487 + hypothetical protein KEGG: gox:GOX1622 transposase gene gene4910 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4855 Amir_4856 Amir_4856 Amir_4856 5781695 5783101 + AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: bvi:Bcep1808_2651 AMP-dependent synthetase and ligase gene gene4911 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4856 Amir_4857 Amir_4857 Amir_4857 5783098 5784357 + 3-oxoacyl-(acyl-carrier-protein) synthase 2 TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2~PFAM: Beta-ketoacyl synthase~KEGG: mgm:Mmc1_1872 3-oxoacyl-[acyl-carrier- protein] synthase II gene gene4912 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4857 Amir_4858 Amir_4858 Amir_4858 5784400 5785698 + aldehyde dehydrogenase PFAM: Aldehyde Dehydrogenase~KEGG: plu:plu3928 hypothetical protein gene gene4913 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4858 Amir_4859 Amir_4859 Amir_4859 5785695 5787365 + thiamine pyrophosphate protein central region PFAM: thiamine pyrophosphate protein central region%3B thiamine pyrophosphate protein domain protein TPP- binding%3B thiamine pyrophosphate protein TPP binding domain protein~KEGG: eba:ebA4751 acetolactate synthase catalytic subunit gene gene4914 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4859 Amir_4860 Amir_4860 Amir_4860 5787362 5789110 + AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: scl:sce8262 non-ribosomal peptide synthetase gene gene4915 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4860 Amir_4861 Amir_4861 Amir_4861 5789149 5789406 + phosphopantetheine-binding PFAM: phosphopantetheine-binding~KEGG: pcr:Pcryo_0517 acyl carrier protein gene gene4916 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4861 Amir_4862 Amir_4862 Amir_4862 5789471 5791270 - ABC transporter related PFAM: ABC transporter related%3B ABC transporter transmembrane region~SMART: AAA ATPase~KEGG: bsu:BSU34820 hypothetical protein gene gene4917 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4862 Amir_4863 Amir_4863 Amir_4863 5791317 5791940 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: bha:BH2103 hypothetical protein gene gene4918 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4863 Amir_4864 Amir_4864 Amir_4864 5791961 5794018 - drug resistance transporter%2C EmrB/QacA subfamily TIGRFAM: drug resistance transporter%2C EmrB/QacA subfamily~PFAM: major facilitator superfamily MFS_1~KEGG: bxe:Bxe_B1779 major facilitator superfamily multidrug efflux transporter gene gene4919 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4864 Amir_4865 Amir_4865 Amir_4865 5794273 5795706 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: bmv:BMASAVP1_0279 EmrB/QacA family drug resistance transporter gene gene4920 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4865 Amir_4866 Amir_4866 Amir_4866 5795703 5797235 - NHL repeat containing protein PFAM: NHL repeat containing protein~KEGG: bxe:Bxe_C0275 hypothetical protein gene gene4921 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4866 Amir_4867 Amir_4867 Amir_4867 5797232 5799193 - Cyclohexanone monooxygenase PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase~KEGG: pzu:PHZ_c1832 putative monooxygenase gene gene4922 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4867 Amir_4868 Amir_4868 Amir_4868 5799287 5799661 + transcriptional regulator%2C XRE family PFAM: helix-turn-helix domain protein~SMART: helix-turn-helix domain protein~KEGG: kpe:KPK_1169 DNA-binding protein gene gene4923 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4868 Amir_4869 Amir_4869 Amir_4869 5799746 5806618 - YD repeat protein TIGRFAM: YD repeat protein~SMART: Hedgehog/intein hint domain protein~KEGG: dal:Dalk_1487 YD repeat protein gene gene4924 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4869 Amir_4870 Amir_4870 Amir_4870 5806663 5810106 - LamG domain protein jellyroll fold domain protein SMART: LamG domain protein jellyroll fold domain protein~KEGG: bat:BAS1022 wall-associated protein%2C putative gene gene4925 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4870 Amir_4871 Amir_4871 Amir_4871 5810478 5810864 - hypothetical protein gene gene4926 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4871 Amir_4872 Amir_4872 Amir_4872 5810924 5813152 - glycoside hydrolase family 3 domain protein PFAM: glycoside hydrolase family 3 domain protein~KEGG: glycoside hydrolase%2C family 3%2C N- terminal:glycoside hydrolase%2C family 3%2C C-terminal gene gene4927 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4872 Amir_4873 Amir_4873 Amir_4873 5813249 5813830 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: psb:Psyr_3154 regulatory protein%2C TetR gene gene4928 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4873 Amir_4874 Amir_4874 Amir_4874 5813832 5814254 - GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: rlt:Rleg2_6394 GCN5-related N- acetyltransferase gene gene4929 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4874 Amir_4875 Amir_4875 Amir_4875 5814319 5814594 - hypothetical protein gene gene4930 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4875 Amir_4876 Amir_4876 Amir_4876 5814623 5814745 + hypothetical protein gene gene4931 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4876 Amir_4877 Amir_4877 Amir_4877 5814878 5817448 + AAA ATPase SMART: AAA ATPase~KEGG: mxa:MXAN_4188 adenylate/guanylate cyclase domain protein gene gene4932 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4877 Amir_4878 Amir_4878 Amir_4878 5817461 5818051 - hypothetical protein gene gene4933 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4878 Amir_4879 Amir_4879 Amir_4879 5818246 5819628 - Coproporphyrinogen dehydrogenase KEGG: mxa:MXAN_2888 coproporphyrinogen III oxidase~PFAM: Radical SAM domain protein%3B HemN domain protein~SMART: Elongator protein 3/MiaB/NifB gene gene4934 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4879 Amir_4880 Amir_4880 Amir_4880 5819649 5820002 - NUDIX hydrolase PFAM: NUDIX hydrolase~KEGG: mxa:MXAN_3769 hydrolase%2C NUDIX family gene gene4935 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4880 Amir_4881 Amir_4881 Amir_4881 5820276 5820926 + hypothetical protein KEGG: pla:Plav_1718 shikimate kinase gene gene4936 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4881 Amir_4882 Amir_4882 Amir_4882 5821126 5822457 + peptidase M20 PFAM: peptidase M20%3B peptidase dimerization domain protein~KEGG: dal:Dalk_4445 peptidase M20 gene gene4937 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4882 Amir_4883 Amir_4883 Amir_4883 5822599 5823291 + hypothetical protein gene gene4938 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4883 Amir_4884 Amir_4884 Amir_4884 5823448 5824230 - transcriptional regulator%2C IclR family PFAM: regulatory protein IclR%3B Transcriptional regulator IclR~SMART: regulatory protein IclR~KEGG: sus:Acid_3105 IclR family transcriptional regulator gene gene4939 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4884 Amir_4885 Amir_4885 Amir_4885 5824290 5825072 - purine or other phosphorylase family 1 PFAM: purine or other phosphorylase family 1~KEGG: aha:AHA_3168 uridine phosphorylase gene gene4940 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4885 Amir_4886 Amir_4886 Amir_4886 5825271 5826164 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: sat:SYN_00367 sulfate transport ATP-binding protein gene gene4941 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4886 Amir_4887 Amir_4887 Amir_4887 5826161 5826964 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: bav:BAV0644 ABC transporter%2C permease protein gene gene4942 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4887 Amir_4888 Amir_4888 Amir_4888 5827032 5828063 + NMT1/THI5 like domain protein PFAM: NMT1/THI5 like domain protein~SMART: extracellular solute-binding protein family 3~KEGG: mes:Meso_0815 putative sulfonate transport system substrate-binding protein gene gene4943 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4888 Amir_4889 Amir_4889 Amir_4889 5828060 5828836 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: bbt:BBta_1169 putative ABC transporter permease protein gene gene4944 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4889 Amir_4890 Amir_4890 Amir_4890 5829168 5829638 + type I polyketide synthase%3B K09936 hypothetical protein KEGG: type I polyketide synthase%3B K09936 hypothetical protein gene gene4945 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4890 Amir_4891 Amir_4891 Amir_4891 5829982 5831325 + dihydroorotase%2C multifunctional complex type TIGRFAM: dihydroorotase%2C multifunctional complex type~PFAM: amidohydrolase~KEGG: scl:sce4269 dihydroorotase gene gene4946 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4891 Amir_4892 Amir_4892 Amir_4892 5831395 5832351 - Kelch repeat-containing protein PFAM: Kelch repeat-containing protein%3B Kelch repeat protein~SMART: Kelch repeat-containing protein~KEGG: mex:Mext_0574 kelch repeat-containing protein gene gene4947 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4892 Amir_4893 Amir_4893 Amir_4893 5832435 5833277 + transcriptional regulator%2C LysR family PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: ade:Adeh_2212 LysR family transcriptional regulator gene gene4948 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4893 Amir_4894 Amir_4894 Amir_4894 5833474 5835150 + serine/threonine protein kinase PFAM: Serine/threonine protein kinase-related%3B tyrosine protein kinase~SMART: serine/threonine protein kinase%3B tyrosine protein kinase~KEGG: scl:sce5237 protein kinase gene gene4949 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4894 Amir_4895 Amir_4895 Amir_4895 5835680 5835904 + hypothetical protein gene gene4950 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4895 Amir_4896 Amir_4896 Amir_4896 5836268 5837341 - NADH:flavin oxidoreductase/NADH oxidase PFAM: NADH:flavin oxidoreductase/NADH oxidase~KEGG: bam:Bamb_4722 NADH:flavin oxidoreductase/NADH oxidase gene gene4951 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4896 Amir_4897 Amir_4897 Amir_4897 5837497 5837952 + transcriptional regulator%2C MarR family PFAM: regulatory protein MarR%3B regulatory protein ArsR~SMART: regulatory protein MarR~KEGG: azc:AZC_0116 regulatory protein gene gene4952 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4897 Amir_4898 Amir_4898 Amir_4898 5838111 5838470 + hypothetical protein KEGG: bsu:BSU26920 hypothetical protein gene gene4953 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4898 Amir_4899 Amir_4899 Amir_4899 5838516 5838890 - hypothetical protein gene gene4954 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4899 Amir_4900 Amir_4900 Amir_4900 5839320 5839988 + hypothetical protein KEGG: bce:BC3289 hypothetical protein gene gene4955 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4900 Amir_4901 Amir_4901 Amir_4901 5840182 5840667 + transcriptional regulator%2C LuxR family PFAM: regulatory protein LuxR~SMART: regulatory protein LuxR~KEGG: reu:Reut_A1539 LuxR family transcriptional regulator gene gene4956 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4901 Amir_4902 Amir_4902 Amir_4902 5840759 5841199 - hypothetical protein gene gene4957 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4902 Amir_4903 Amir_4903 Amir_4903 5841304 5842035 - transcriptional regulator%2C GntR family PFAM: GntR domain protein%3B regulatory protein GntR HTH~SMART: regulatory protein GntR HTH~KEGG: jan:Jann_4133 GntR family transcriptional regulator gene gene4958 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4903 Amir_4904 Amir_4904 Amir_4904 5842070 5842849 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: rsq:Rsph17025_3334 hypothetical protein gene gene4959 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4904 Amir_4905 Amir_4905 Amir_4905 5842846 5843895 - transport system permease protein PFAM: transport system permease protein~KEGG: dac:Daci_3152 transport system permease protein gene gene4960 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4905 Amir_4906 Amir_4906 Amir_4906 5843892 5844974 - transport system permease protein PFAM: transport system permease protein~KEGG: atc:AGR_pAT_449 ferric enterobactin transport protein FepD gene gene4961 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4906 Amir_4907 Amir_4907 Amir_4907 5844974 5845930 - periplasmic binding protein PFAM: periplasmic binding protein~KEGG: bsu:BSU08440 hypothetical protein gene gene4962 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4907 Amir_4908 Amir_4908 Amir_4908 5846003 5847709 - putative lantibiotic modification protein KEGG: mxa:MXAN_2857 putative lantibiotic modification protein gene gene4963 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4908 Amir_4909 Amir_4909 Amir_4909 5847706 5848596 - aminotransferase class IV PFAM: aminotransferase class IV~KEGG: afw:Anae109_1102 branched-chain amino acid aminotransferase gene gene4964 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4909 Amir_4910 Amir_4910 Amir_4910 5848593 5849711 - Luciferase-like monooxygenase PFAM: Luciferase-like monooxygenase~KEGG: mxa:MXAN_4001 non-ribosomal peptide synthase/polyketide synthase gene gene4965 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4910 Amir_4911 Amir_4911 Amir_4911 5849711 5854111 - Beta-ketoacyl synthase PFAM: Beta-ketoacyl synthase%3B KR domain protein%3B Acyl transferase%3B short-chain dehydrogenase/reductase SDR%3B phosphopantetheine-binding~KEGG: mxa:MXAN_3620 polyketide synthase type I gene gene4966 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4911 Amir_4912 Amir_4912 Amir_4912 5854108 5859255 - amino acid adenylation domain protein TIGRFAM: amino acid adenylation domain protein~PFAM: AMP-dependent synthetase and ligase%3B phosphopantetheine-binding%3B condensation domain protein~KEGG: mxa:MXAN_4414 non-ribosomal peptide synthase gene gene4967 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4912 Amir_4913 Amir_4913 Amir_4913 5859252 5861474 - peptidase S45 penicillin amidase PFAM: peptidase S45 penicillin amidase~KEGG: scl:sce8259 penicillin amidase gene gene4968 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4913 Amir_4914 Amir_4914 Amir_4914 5861467 5862804 - condensation domain protein PFAM: condensation domain protein~KEGG: mxa:MXAN_4525 non-ribosomal peptide synthase MxaA gene gene4969 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4914 Amir_4915 Amir_4915 Amir_4915 5862801 5863847 - aldo/keto reductase PFAM: aldo/keto reductase~KEGG: hypothetical protein gene gene4970 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4915 Amir_4916 Amir_4916 Amir_4916 5863840 5865111 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: bpy:Bphyt_3134 major facilitator superfamily MFS_1 gene gene4971 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4916 Amir_4917 Amir_4917 Amir_4917 5865169 5865267 - hypothetical protein gene gene4972 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4917 Amir_4918 Amir_4918 Amir_4918 5865719 5866492 + thiazole biosynthesis family protein PFAM: thiazole biosynthesis family protein~KEGG: esa:ESA_03683 thiazole synthase gene gene4973 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4918 Amir_4919 Amir_4919 Amir_4919 5866938 5867300 - anti-sigma-factor antagonist PFAM: Sulfate transporter/antisigma-factor antagonist STAS gene gene4974 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4919 Amir_4920 Amir_4920 Amir_4920 5867297 5868397 - cobalamin B12-binding domain protein PFAM: cobalamin B12-binding domain protein~KEGG: rpc:RPC_1467 cobalamin B12-binding gene gene4975 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4920 Amir_4921 Amir_4921 Amir_4921 5868394 5870043 - protein serine phosphatase with GAF(s) sensor(s) PFAM: Stage II sporulation E family protein%3B GAF domain protein~SMART: protein phosphatase 2C domain protein%3B GAF domain protein~KEGG: sus:Acid_6601 serine phosphatase gene gene4976 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4921 Amir_4922 Amir_4922 Amir_4922 5870336 5870731 - conserved hypothetical protein KEGG: rsq:Rsph17025_3833 hypothetical protein gene gene4977 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4922 Amir_4923 Amir_4923 Amir_4923 5870927 5871964 - protein tyrosine/serine phosphatase KEGG: nar:Saro_3082 protein tyrosine/serine phosphatase gene gene4978 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4923 Amir_4924 Amir_4924 Amir_4924 5871973 5873988 - conserved hypothetical protein KEGG: mxa:MXAN_6381 hypothetical protein gene gene4979 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4924 Amir_4925 Amir_4925 Amir_4925 5873990 5874877 - conserved hypothetical protein KEGG: nar:Saro_1805 hypothetical protein gene gene4980 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4925 Amir_4926 Amir_4926 Amir_4926 5875296 5876483 + transcriptional regulator%2C CdaR KEGG: bxe:Bxe_B2117 CdaR family transcriptional regulator gene gene4981 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4926 Amir_4927 Amir_4927 Amir_4927 5876641 5878128 + extracellular solute-binding protein family 5 PFAM: extracellular solute-binding protein family 5~KEGG: eca:ECA1549 putative ABC transporter substrate-binding protein gene gene4982 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4927 Amir_4928 Amir_4928 Amir_4928 5878163 5879878 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: spe:Spro_2742 binding-protein-dependent transport systems inner membrane component gene gene4983 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4928 Amir_4929 Amir_4929 Amir_4929 5879879 5881066 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: ent:Ent638_3208 major facilitator transporter gene gene4984 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4929 Amir_4930 Amir_4930 Amir_4930 5881105 5882268 - helix-turn-helix domain protein SMART: helix-turn-helix domain protein~KEGG: bvi:Bcep1808_6371 transcriptional regulator gene gene4985 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4930 Amir_4931 Amir_4931 Amir_4931 5882507 5883967 + sodium/sulphate symporter PFAM: sodium/sulphate symporter%3B Citrate transporter~KEGG: pde:Pden_4560 sodium/sulphate symporter gene gene4986 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4931 Amir_4932 Amir_4932 Amir_4932 5883986 5885137 + glycerate kinase KEGG: pde:Pden_4561 glycerate kinase~TIGRFAM: glycerate kinase~PFAM: glycerate kinase gene gene4987 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4932 Amir_4933 Amir_4933 Amir_4933 5885217 5885537 + putative transcriptional regulator KEGG: scl:sce2447 putative transcriptional regulator gene gene4988 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4933 Amir_4934 Amir_4934 Amir_4934 5885573 5887120 + histidine kinase PFAM: ATP-binding region ATPase domain protein%3B histidine kinase HAMP region domain protein%3B histidine kinase A domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B histidine kinase HAMP region domain protein~KEGG: gbm:Gbem_2673 heavy metal sensor signal transduction histidine kinase gene gene4989 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4934 Amir_4935 Amir_4935 Amir_4935 5887105 5887770 + two component transcriptional regulator%2C winged helix family PFAM: response regulator receiver%3B transcriptional regulator domain protein~SMART: response regulator receiver~KEGG: two component heavy metal response transcriptional regulator%2C winged helix family gene gene4990 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4935 Amir_4936 Amir_4936 Amir_4936 5888249 5889085 + Lytic transglycosylase catalytic PFAM: Lytic transglycosylase catalytic~KEGG: bsu:BSU26030 hypothetical protein gene gene4991 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4936 Amir_4937 Amir_4937 Amir_4937 5889386 5890978 + Na+/H+ antiporter TIGRFAM: Na+/H+ antiporter~PFAM: sodium/hydrogen exchanger~KEGG: rpe:RPE_0181 Na+/H+ antiporter gene gene4992 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4937 Amir_4938 Amir_4938 Amir_4938 5890985 5892421 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: spe:Spro_1465 major facilitator transporter gene gene4993 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4938 Amir_4939 Amir_4939 Amir_4939 5892418 5893296 - alpha/beta hydrolase fold protein PFAM: alpha/beta hydrolase fold~KEGG: bvi:Bcep1808_3804 alpha/beta hydrolase fold gene gene4994 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4939 Amir_4940 Amir_4940 Amir_4940 5893330 5894262 + transcriptional regulator%2C LysR family PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: ade:Adeh_2212 LysR family transcriptional regulator gene gene4995 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4940 Amir_4941 Amir_4941 Amir_4941 5894326 5894721 + hypothetical protein gene gene4996 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4941 Amir_4942 Amir_4942 Amir_4942 5894806 5895813 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B NAD- dependent epimerase/dehydratase~KEGG: short-chain dehydrogenase/reductase (SDR) family protein gene gene4997 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4942 Amir_4943 Amir_4943 Amir_4943 5895901 5896632 - Survival protein SurE PFAM: Survival protein SurE~KEGG: rce:RC1_0808 5'/3'-nucleotidase SurE gene gene4998 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4943 Amir_4944 Amir_4944 Amir_4944 5896629 5897543 - PfkB domain protein PFAM: PfkB domain protein~KEGG: bha:BH0827 fructose 1-phosphate kinase gene gene4999 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4944 Amir_4945 Amir_4945 Amir_4945 5897661 5899031 - conserved hypothetical protein KEGG: scl:sce9313 hypothetical protein gene gene5000 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4945 Amir_4946 Amir_4946 Amir_4946 5899252 5900142 + hypothetical protein KEGG: hypothetical protein gene gene5001 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4946 Amir_4947 Amir_4947 Amir_4947 5900186 5901841 - amine oxidase PFAM: amine oxidase%3B FAD dependent oxidoreductase~KEGG: hypothetical protein gene gene5002 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4947 Amir_4948 Amir_4948 Amir_4948 5901951 5902766 + putative membrane protein KEGG: bid:Bind_2275 membrane protein-like protein gene gene5003 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4948 Amir_4949 Amir_4949 Amir_4949 5902763 5903920 + glycosyl transferase family 2 PFAM: glycosyl transferase family 2~KEGG: mex:Mext_3434 glycosyl transferase family protein gene gene5004 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4949 Amir_4950 Amir_4950 Amir_4950 5903864 5904598 - CDP-alcohol phosphatidyltransferase PFAM: CDP-alcohol phosphatidyltransferase~KEGG: ank:AnaeK_2943 CDP-alcohol phosphatidyltransferase gene gene5005 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4950 Amir_4951 Amir_4951 Amir_4951 5905661 5906506 + hypothetical protein KEGG: dsh:Dshi_1005 putative ribonuclease BN gene gene5006 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4951 Amir_4952 Amir_4952 Amir_4952 5906591 5907799 + conserved hypothetical protein KEGG: mxa:MXAN_1566 hypothetical protein gene gene5007 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4952 Amir_4953 Amir_4953 Amir_4953 5908004 5908942 + Aminopeptidase Y PFAM: peptidase M28%3B peptidase M20~KEGG: pap:PSPA7_2223 putative aminopeptidase gene gene5008 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4953 Amir_4954 Amir_4954 Amir_4954 5908946 5909863 - protein of unknown function DUF6 transmembrane PFAM: protein of unknown function DUF6 transmembrane~KEGG: psb:Psyr_1799 hypothetical protein gene gene5009 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4954 Amir_4955 Amir_4955 Amir_4955 5909924 5910580 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: bxe:Bxe_B3018 TetR family transcriptional regulator gene gene5010 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4955 Amir_4956 Amir_4956 Amir_4956 5910899 5911636 + glycosyl transferase family 2 PFAM: glycosyl transferase family 2~KEGG: aba:Acid345_0505 glycosyl transferase%2C family 2 gene gene5011 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4956 Amir_4957 Amir_4957 Amir_4957 5911633 5913189 + glycosyl transferase group 1 PFAM: glycosyl transferase group 1~KEGG: afw:Anae109_1425 glycosyl transferase group 1 gene gene5012 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4957 Amir_4958 Amir_4958 Amir_4958 5913243 5915711 + glycosyl transferase group 1 PFAM: glycosyl transferase group 1~KEGG: ade:Adeh_3504 phosphatidylinositol alpha- mannosyltransferase gene gene5013 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4958 Amir_4959 Amir_4959 Amir_4959 5915708 5917198 + hypothetical protein KEGG: tgr:Tgr7_3096 glycosyl transferase family 39 gene gene5014 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4959 Amir_4960 Amir_4960 Amir_4960 5917195 5918349 + acyltransferase 3 PFAM: acyltransferase 3~KEGG: cak:Caul_2329 acyltransferase 3 gene gene5015 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4960 Amir_4961 Amir_4961 Amir_4961 5918378 5919166 - hypothetical protein KEGG: dal:Dalk_1860 hypothetical protein gene gene5016 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4961 Amir_4962 Amir_4962 Amir_4962 5919163 5919753 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: rme:Rmet_4903 transcriptional regulator%2C TetR family gene gene5017 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4962 Amir_4963 Amir_4963 Amir_4963 5919904 5922537 - glycoside hydrolase family 3 domain protein PFAM: glycoside hydrolase family 3 domain protein~KEGG: rfr:Rfer_1113 glycoside hydrolase family protein gene gene5018 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4963 Amir_4964 Amir_4964 Amir_4964 5922777 5925161 - Pectinesterase PFAM: Pectinesterase%3B Ricin B lectin%3B Pectate lyase/Amb allergen~SMART: Ricin B lectin%3B Parallel beta-helix repeat%3B Pectate lyase/Amb allergen~KEGG: bha:BH0698 pectate lyase gene gene5019 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4964 Amir_4965 Amir_4965 Amir_4965 5925378 5926304 + proline iminopeptidase KEGG: pip%3B proline iminopeptidase~TIGRFAM: proline iminopeptidase~PFAM: alpha/beta hydrolase fold gene gene5020 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4965 Amir_4966 Amir_4966 Amir_4966 5926380 5927903 - Alpha-N-arabinofuranosidase KEGG: hypothetical protein~PFAM: glycoside hydrolase family 62%3B Ricin B lectin~SMART: Ricin B lectin gene gene5021 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4966 Amir_4967 Amir_4967 Amir_4967 5928141 5928362 - hypothetical protein gene gene5022 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4967 Amir_4968 Amir_4968 Amir_4968 5928359 5928478 - hypothetical protein gene gene5023 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4968 Amir_4969 Amir_4969 Amir_4969 5928734 5929717 + methionyl-tRNA synthetase-like protein KEGG: acr:Acry_0972 methionyl-tRNA synthetase gene gene5024 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4969 Amir_4970 Amir_4970 Amir_4970 5929742 5930332 - Methyltransferase type 12 PFAM: Methyltransferase type 12%3B Methyltransferase type 11%3B Tellurite resistance methyltransferase%2C TehB%2C core%3B thiopurine S-methyltransferase~KEGG: scl:sce2146 putative methyltransferase gene gene5025 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4970 Amir_4971 Amir_4971 Amir_4971 5930579 5931733 + monooxygenase FAD-binding PFAM: monooxygenase FAD-binding~KEGG: bur:Bcep18194_A4891 monooxygenase%2C FAD- binding gene gene5026 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4971 Amir_4972 Amir_4972 Amir_4972 5931913 5932251 + pseudogene gene5027 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4972 Amir_4973 Amir_4973 Amir_4973 5932271 5932722 + pseudogene gene5028 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4973 Amir_4974 Amir_4974 Amir_4974 5933060 5934679 + hypothetical protein KEGG: MYH3%3B myosin%2C heavy chain 3%2C skeletal muscle%2C embryonic%3B K10352 myosin heavy chain gene gene5029 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4974 Amir_4975 Amir_4975 Amir_4975 5934962 5937010 - MMPL domain protein PFAM: MMPL domain protein~KEGG: bcz:BCZK2163 MmpL family integral membrane protein gene gene5030 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4975 Amir_4976 Amir_4976 Amir_4976 5937089 5937553 + transcriptional regulator%2C MarR family PFAM: regulatory protein MarR~SMART: regulatory protein MarR~KEGG: cak:Caul_0809 MarR family transcriptional regulator gene gene5031 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4976 Amir_4977 Amir_4977 Amir_4977 5937606 5938742 + glycosyltransferase%2C MGT family TIGRFAM: glycosyltransferase%2C MGT family~PFAM: protein of unknown function DUF1205~KEGG: bsu:BSU12220 hypothetical protein gene gene5032 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4977 Amir_4978 Amir_4978 Amir_4978 5939063 5940232 + glycosyltransferase%2C MGT family TIGRFAM: glycosyltransferase%2C MGT family~PFAM: protein of unknown function DUF1205%3B glycosyl transferase family 28~KEGG: ecf:ECH74115_1369 glycosyl transferase gene gene5033 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4978 Amir_4979 Amir_4979 Amir_4979 5940308 5941630 - protein of unknown function DUF21 PFAM: protein of unknown function DUF21%3B CBS domain containing protein%3B transporter-associated region~KEGG: scl:sce2495 hemolysin gene gene5034 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4979 Amir_4980 Amir_4980 Amir_4980 5941747 5942130 + hypothetical protein gene gene5035 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4980 Amir_4981 Amir_4981 Amir_4981 5942123 5942653 + hypothetical protein KEGG: GA24328 gene product from transcript GA24328- RA gene gene5036 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4981 Amir_4982 Amir_4982 Amir_4982 5942646 5942987 + hypothetical protein KEGG: hne:HNE_2114 hypothetical protein gene gene5037 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4982 Amir_4983 Amir_4983 Amir_4983 5942988 5943158 - hypothetical protein gene gene5038 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4983 Amir_4984 Amir_4984 Amir_4984 5943412 5945070 + hypothetical protein KEGG: hypothetical protein%3B K03497 chromosome partitioning protein%2C ParB family gene gene5039 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4984 Amir_4985 Amir_4985 Amir_4985 5945067 5947130 - Tetratricopeptide TPR_4 PFAM: Tetratricopeptide TPR_4~SMART: Tetratricopeptide domain protein~KEGG: scl:sce5225 protein kinase gene gene5040 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4985 Amir_4986 Amir_4986 Amir_4986 5947208 5947435 - protein of unknown function DUF397 PFAM: protein of unknown function DUF397 gene gene5041 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4986 Amir_4987 Amir_4987 Amir_4987 5947724 5948581 - transcriptional regulator%2C XRE family SMART: helix-turn-helix domain protein gene gene5042 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4987 Amir_4988 Amir_4988 Amir_4988 5949273 5949842 + conserved hypothetical protein KEGG: bra:BRADO4970 hypothetical protein gene gene5043 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4988 Amir_4989 Amir_4989 Amir_4989 5949889 5950326 - hypothetical protein gene gene5044 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4989 Amir_4990 Amir_4990 Amir_4990 5950479 5951099 + Sua5/YciO/YrdC/YwlC family protein TIGRFAM: Sua5/YciO/YrdC/YwlC family protein~PFAM: SUA5/yciO/yrdC domain~KEGG: nmc:NMC1726 hypothetical protein gene gene5045 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4990 Amir_4991 Amir_4991 Amir_4991 5951198 5951728 + hypothetical protein KEGG: hypothetical protein gene gene5046 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4991 Amir_4992 Amir_4992 Amir_4992 5951838 5952440 + SNARE associated Golgi protein PFAM: SNARE associated Golgi protein~KEGG: mch:Mchl_4966 SNARE associated Golgi protein gene gene5047 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4992 Amir_4993 Amir_4993 Amir_4993 5952533 5953585 + hypothetical protein gene gene5048 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4993 Amir_4994 Amir_4994 Amir_4994 5953663 5954361 - hypothetical protein KEGG: esa:ESA_01086 hypothetical protein gene gene5049 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4994 Amir_4995 Amir_4995 Amir_4995 5954405 5955061 - two component transcriptional regulator%2C LuxR family PFAM: response regulator receiver%3B regulatory protein LuxR%3B Sigma-70 region 4 type 2~SMART: response regulator receiver%3B regulatory protein LuxR~KEGG: scl:sce5431 two-component system response regulator gene gene5050 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4995 Amir_4996 Amir_4996 Amir_4996 5955058 5956275 - histidine kinase PFAM: histidine kinase dimerization and phosphoacceptor region%3B ATP-binding region ATPase domain protein~KEGG: mch:Mchl_4713 histidine kinase gene gene5051 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4996 Amir_4997 Amir_4997 Amir_4997 5956415 5957347 + hypothetical protein KEGG: bte:BTH_II2362 esterase EstC gene gene5052 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4997 Amir_4998 Amir_4998 Amir_4998 5957634 5957768 - pseudogene gene5053 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4998 Amir_4999 Amir_4999 Amir_4999 5957860 5958462 - HDA1511%3B class II RPD3 type histone deacetylase protein%3B K11407 histone deacetylase 6/10 KEGG: HDA1511%3B class II RPD3 type histone deacetylase protein%3B K11407 histone deacetylase 6/10 gene gene5054 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_4999 Amir_5000 Amir_5000 Amir_5000 5958438 5958995 - GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: pla:Plav_1643 GCN5-related N- acetyltransferase gene gene5055 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5000 Amir_5001 Amir_5001 Amir_5001 5959005 5960336 - catalytic domain of components of various dehydrogenase complexes PFAM: catalytic domain of components of various dehydrogenase complexes%3B biotin/lipoyl attachment domain- containing protein%3B E3 binding domain protein~KEGG: bpt:Bpet3509 branched-chain alpha-keto acid dehydrogenase subunit E2 gene gene5056 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5001 Amir_5002 Amir_5002 Amir_5002 5960329 5961306 - Transketolase central region PFAM: Transketolase central region%3B Transketolase domain protein~KEGG: nha:Nham_3108 transketolase%2C central region gene gene5057 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5002 Amir_5003 Amir_5003 Amir_5003 5961381 5962493 - pyruvate dehydrogenase (acetyl-transferring) E1 component%2C alpha subunit KEGG: ank:AnaeK_1422 pyruvate dehydrogenase (acetyl- transferring)~TIGRFAM: pyruvate dehydrogenase (acetyl- transferring) E1 component%2C alpha subunit~PFAM: dehydrogenase E1 component gene gene5058 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5003 Amir_5004 Amir_5004 Amir_5004 5962605 5963093 + transcriptional regulator%2C AsnC family PFAM: regulatory protein AsnC/Lrp family~SMART: regulatory protein AsnC/Lrp family~KEGG: har:HEAR0121 leucine-responsive regulatory protein gene gene5059 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5004 Amir_5005 Amir_5005 Amir_5005 5963435 5964199 - SCP-like extracellular PFAM: SCP-like extracellular~KEGG: SCP-like extracellular gene gene5060 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5005 Amir_5006 Amir_5006 Amir_5006 5964442 5965722 - histidine kinase PFAM: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B histidine kinase HAMP region domain protein~SMART: histidine kinase HAMP region domain protein%3B ATP-binding region ATPase domain protein%3B histidine kinase A domain protein~KEGG: ent:Ent638_4061 two-component sensor protein gene gene5061 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5006 Amir_5007 Amir_5007 Amir_5007 5965719 5966435 - two component transcriptional regulator%2C winged helix family PFAM: response regulator receiver%3B transcriptional regulator domain protein~SMART: response regulator receiver~KEGG: pap:PSPA7_3717 KDP operon transcriptional regulatory protein KdpE gene gene5062 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5007 Amir_5008 Amir_5008 Amir_5008 5966846 5967412 + hypothetical protein KEGG: similar to Ras GTPase-activating protein- binding protein 2 (G3BP-2) (GAP SH3 domain-binding protein 2) gene gene5063 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5008 Amir_5009 Amir_5009 Amir_5009 5967691 5968167 - hypothetical protein KEGG: cti:RALTA_A3069 putative membrane bound protein%2C weak cytochrome c domains gene gene5064 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5009 Amir_5010 Amir_5010 Amir_5010 5968155 5970035 - aminoglycoside phosphotransferase PFAM: aminoglycoside phosphotransferase~KEGG: bxe:Bxe_A3516 putative transposase gene gene5065 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5010 Amir_5011 Amir_5011 Amir_5011 5970190 5970402 + hypothetical protein gene gene5066 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5011 Amir_5012 Amir_5012 Amir_5012 5970511 5971992 + diguanylate cyclase KEGG: mrd:Mrad2831_4352 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)~TIGRFAM: diguanylate cyclase~PFAM: GGDEF domain containing protein~SMART: GGDEF domain containing protein gene gene5067 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5012 Amir_5013 Amir_5013 Amir_5013 5971989 5972759 - cyclase family protein PFAM: cyclase family protein~KEGG: hch:HCH_01555 metal-dependent hydrolase gene gene5068 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5013 Amir_5014 Amir_5014 Amir_5014 5973146 5974246 - Alcohol dehydrogenase zinc-binding domain protein PFAM: Alcohol dehydrogenase zinc-binding domain protein%3B Alcohol dehydrogenase GroES domain protein~KEGG: smd:Smed_2747 alcohol dehydrogenase GroES domain protein gene gene5069 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5014 Amir_5015 Amir_5015 Amir_5015 5974243 5974656 - thioesterase superfamily protein PFAM: thioesterase superfamily protein~KEGG: bmj:BMULJ_01339 putative thioesterase gene gene5070 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5015 Amir_5016 Amir_5016 Amir_5016 5975219 5976625 + putative transcriptional regulator%2C Crp/Fnr family PFAM: cyclic nucleotide-binding~SMART: cyclic nucleotide-binding~KEGG: mxa:MXAN_6248 cyclic nucleotide-binding domain protein gene gene5071 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5016 Amir_5017 Amir_5017 Amir_5017 5976672 5978081 + putative transcriptional regulator%2C Crp/Fnr family PFAM: cyclic nucleotide-binding~SMART: cyclic nucleotide-binding~KEGG: scl:sce1442 putative nucleotide-binding protein gene gene5072 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5017 Amir_5018 Amir_5018 Amir_5018 5978465 5979505 + Polyprenyl synthetase PFAM: Polyprenyl synthetase~KEGG: sfu:Sfum_1417 polyprenyl synthetase gene gene5073 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5018 Amir_5019 Amir_5019 Amir_5019 5979577 5980500 + hydroxymethylbutenyl pyrophosphate reductase KEGG: acr:Acry_1832 hydroxymethylbutenyl pyrophosphate reductase~TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase~PFAM: LytB protein gene gene5074 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5019 Amir_5020 Amir_5020 Amir_5020 5980497 5982353 + Transketolase central region PFAM: Transketolase central region%3B Transketolase domain protein~KEGG: mgm:Mmc1_1048 1-deoxy-D-xylulose-5-phosphate synthase gene gene5075 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5020 Amir_5021 Amir_5021 Amir_5021 5982456 5983265 + hypothetical protein KEGG: rsr-1%3B SR protein related gene gene5076 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5021 Amir_5022 Amir_5022 Amir_5022 5983470 5983808 + protein of unknown function DUF742 PFAM: protein of unknown function DUF742 gene gene5077 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5022 Amir_5023 Amir_5023 Amir_5023 5983891 5984628 - putative transmembrane anti-sigma factor gene gene5078 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5023 Amir_5024 Amir_5024 Amir_5024 5984634 5985200 - RNA polymerase%2C sigma-24 subunit%2C ECF subfamily TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family~PFAM: sigma-70 region 2 domain protein%3B Sigma-70 region 4 type 2%3B sigma-70 region 4 domain protein~KEGG: rpe:RPE_0795 RNA polymerase sigma factor RpoE gene gene5079 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5024 Amir_5025 Amir_5025 Amir_5025 5985832 5987058 + glycosyl transferase family 2 PFAM: glycosyl transferase family 2~KEGG: sfu:Sfum_0186 glycosyl transferase%2C family 2 gene gene5080 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5025 Amir_5026 Amir_5026 Amir_5026 5987190 5987387 + pseudogene gene5081 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5026 Amir_5027 Amir_5027 Amir_5027 5987425 5988459 - Alcohol dehydrogenase GroES domain protein PFAM: Alcohol dehydrogenase GroES domain protein%3B Alcohol dehydrogenase zinc-binding domain protein~KEGG: rso:RSc0632 putative NADP-dependent alcohol dehydrogenase oxidoreductase protein gene gene5082 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5027 Amir_5028 Amir_5028 Amir_5028 5988557 5989141 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: scl:sce9124 TetR family transcriptional regulator gene gene5083 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5028 Amir_5029 Amir_5029 Amir_5029 5989207 5989683 + protein of unknown function DUF1232 PFAM: protein of unknown function DUF1232~KEGG: mca:MCA0116 hypothetical protein gene gene5084 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5029 Amir_5030 Amir_5030 Amir_5030 5989648 5990823 - conserved hypothetical protein PFAM: conserved hypothetical protein~KEGG: afw:Anae109_3197 hypothetical protein gene gene5085 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5030 Amir_5031 Amir_5031 Amir_5031 5990820 5990927 - hypothetical protein gene gene5086 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5031 Amir_5032 Amir_5032 Amir_5032 5991068 5991850 - phospholipid/glycerol acyltransferase PFAM: phospholipid/glycerol acyltransferase~SMART: phospholipid/glycerol acyltransferase~KEGG: dar:Daro_0405 phospholipid/glycerol acyltransferase gene gene5087 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5032 Amir_5033 Amir_5033 Amir_5033 5991988 5993157 + response regulator receiver modulated serine phosphatase PFAM: Stage II sporulation E family protein%3B response regulator receiver~SMART: protein phosphatase 2C domain protein%3B response regulator receiver~KEGG: mag:amb3537 serine phosphatase RsbU%2C regulator of sigma subunit gene gene5088 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5033 Amir_5034 Amir_5034 Amir_5034 5993160 5994656 + histidine kinase PFAM: ATP-binding region ATPase domain protein%3B histidine kinase HAMP region domain protein%3B histidine kinase A domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B histidine kinase HAMP region domain protein~KEGG: dal:Dalk_3400 histidine kinase gene gene5089 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5034 Amir_5035 Amir_5035 Amir_5035 5994653 5995090 + response regulator receiver protein PFAM: response regulator receiver~SMART: response regulator receiver~KEGG: mag:amb2979 FOG: CheY-like receiver gene gene5090 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5035 Amir_5036 Amir_5036 Amir_5036 5995182 5995937 + alpha/beta hydrolase fold-1 KEGG: ade:Adeh_3125 alpha/beta hydrolase fold-1 gene gene5091 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5036 Amir_5037 Amir_5037 Amir_5037 5996029 5996250 - protein of unknown function DUF397 PFAM: protein of unknown function DUF397 gene gene5092 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5037 Amir_5038 Amir_5038 Amir_5038 5996247 5997110 - helix-turn-helix domain protein SMART: helix-turn-helix domain protein gene gene5093 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5038 Amir_5039 Amir_5039 Amir_5039 5997300 5997644 + hypothetical protein gene gene5094 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5039 Amir_5040 Amir_5040 Amir_5040 5997598 5997861 - hypothetical protein gene gene5095 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5040 Amir_5041 Amir_5041 Amir_5041 5998125 5998613 - hypothetical protein KEGG: hypothetical protein gene gene5096 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5041 Amir_5042 Amir_5042 Amir_5042 5998912 5999094 - hypothetical protein gene gene5097 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5042 Amir_5043 Amir_5043 Amir_5043 5999351 6001408 - superfamily I DNA and RNA helicase-like protein KEGG: aeh:Mlg_1110 hypothetical protein gene gene5098 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5043 Amir_5044 Amir_5044 Amir_5044 6001996 6003132 + hypothetical protein KEGG: afw:Anae109_1986 extracellular HAF gene gene5099 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5044 Amir_5045 Amir_5045 Amir_5045 6003391 6003750 - hypothetical protein gene gene5100 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5045 Amir_5046 Amir_5046 Amir_5046 6003870 6004451 - putative transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: scl:sce9124 TetR family transcriptional regulator gene gene5101 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5046 Amir_5047 Amir_5047 Amir_5047 6004530 6005375 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: bid:Bind_1825 short-chain dehydrogenase/reductase SDR gene gene5102 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5047 Amir_5048 Amir_5048 Amir_5048 6005410 6006147 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B KR domain protein~KEGG: bur:Bcep18194_B1012 short-chain dehydrogenase/reductase SDR gene gene5103 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5048 Amir_5049 Amir_5049 Amir_5049 6006185 6009280 - amidohydrolase PFAM: amidohydrolase%3B WD40 domain protein beta Propeller~KEGG: ade:Adeh_2230 hypothetical protein gene gene5104 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5049 Amir_5050 Amir_5050 Amir_5050 6009463 6010116 - hypothetical protein gene gene5105 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5050 Amir_5051 Amir_5051 Amir_5051 6010206 6011885 + transposase IS4 family protein PFAM: transposase IS4 family protein~KEGG: mno:Mnod_8094 transposase IS4 family protein gene gene5106 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5051 Amir_5052 Amir_5052 Amir_5052 6011951 6014152 - superfamily I DNA and RNA helicase-like protein KEGG: bcz:BCZK2539 UvrD/Rep helicase family protein gene gene5107 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5052 Amir_5053 Amir_5053 Amir_5053 6014361 6015176 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: spe:Spro_3426 ABC transporter-related protein gene gene5108 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5053 Amir_5054 Amir_5054 Amir_5054 6015173 6016204 - transport system permease protein PFAM: transport system permease protein~KEGG: ppg:PputGB1_1806 transport system permease protein gene gene5109 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5054 Amir_5055 Amir_5055 Amir_5055 6016201 6017202 - transport system permease protein PFAM: transport system permease protein~KEGG: atc:AGR_pAT_449 ferric enterobactin transport protein FepD gene gene5110 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5055 Amir_5056 Amir_5056 Amir_5056 6017298 6018260 - PfkB domain protein PFAM: PfkB domain protein~KEGG: bha:BH3724 2-keto-3-deoxygluconate kinase gene gene5111 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5056 Amir_5057 Amir_5057 Amir_5057 6018257 6019279 - Alcohol dehydrogenase GroES domain protein PFAM: Alcohol dehydrogenase GroES domain protein%3B Alcohol dehydrogenase zinc-binding domain protein~KEGG: gdi:GDI1202 L-idonate 5-dehydrogenase gene gene5112 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5057 Amir_5058 Amir_5058 Amir_5058 6019276 6020682 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1%3B General substrate transporter~KEGG: eca:ECA0919 transport protein gene gene5113 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5058 Amir_5059 Amir_5059 Amir_5059 6020808 6022235 - mannitol dehydrogenase domain protein PFAM: Mannitol dehydrogenase domain%3B Mannitol dehydrogenase rossman domain~KEGG: mmr:Mmar10_0223 mannitol dehydrogenase gene gene5114 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5059 Amir_5060 Amir_5060 Amir_5060 6022232 6023440 - Mandelate racemase/muconate lactonizing protein PFAM: Mandelate racemase/muconate lactonizing protein~KEGG: eca:ECA0917 putative starvation sensing mandelate racemase / muconate lactonizing enzyme gene gene5115 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5060 Amir_5061 Amir_5061 Amir_5061 6024619 6025329 + transcriptional regulator%2C GntR family PFAM: regulatory protein GntR HTH%3B GntR domain protein~SMART: regulatory protein GntR HTH~KEGG: sme:SMa0065 GntR family transcriptional regulator gene gene5116 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5061 Amir_5062 Amir_5062 Amir_5062 6025326 6025625 + hypothetical protein gene gene5117 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5062 Amir_5063 Amir_5063 Amir_5063 6025703 6025897 - MbtH domain protein PFAM: MbtH domain protein~KEGG: bbt:BBta_4111 hypothetical protein gene gene5118 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5063 Amir_5064 Amir_5064 Amir_5064 6025894 6039243 - amino acid adenylation domain protein TIGRFAM: amino acid adenylation domain protein~PFAM: AMP-dependent synthetase and ligase%3B phosphopantetheine-binding%3B condensation domain protein~KEGG: mxa:MXAN_3636 non-ribosomal peptide synthetase gene gene5119 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5064 Amir_5065 Amir_5065 Amir_5065 6039351 6040361 - periplasmic binding protein PFAM: periplasmic binding protein~KEGG: atc:AGR_pAT_447 DtxR/iron regulated lipoprotein precursor gene gene5120 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5065 Amir_5066 Amir_5066 Amir_5066 6040429 6041757 - L-lysine 6-monooxygenase (NADPH) KEGG: dac:Daci_4749 L-lysine 6-monooxygenase (NADPH) gene gene5121 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5066 Amir_5067 Amir_5067 Amir_5067 6041895 6043544 + ABC transporter related PFAM: ABC transporter related%3B ABC transporter transmembrane region~KEGG: met:M446_4330 lipid ABC transporter ATPase/inner membrane protein gene gene5122 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5067 Amir_5068 Amir_5068 Amir_5068 6043618 6045618 + ABC transporter related PFAM: ABC transporter related%3B ABC transporter transmembrane region~SMART: AAA ATPase~KEGG: afw:Anae109_3226 ABC transporter related gene gene5123 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5068 Amir_5069 Amir_5069 Amir_5069 6045677 6046321 + beta-lactamase domain protein PFAM: beta-lactamase domain protein~KEGG: beta-lactamase domain protein gene gene5124 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5069 Amir_5070 Amir_5070 Amir_5070 6046382 6047443 - N-acetylmuramoyl-L-alanine amidase family 2 PFAM: N-acetylmuramoyl-L-alanine amidase family 2~SMART: Animal peptidoglycan recognition protein PGRP%3B N-acetylmuramoyl-L-alanine amidase family 2~KEGG: similar to PGRP-SC1a protein gene gene5125 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5070 Amir_5071 Amir_5071 Amir_5071 6047597 6048781 - amine oxidase PFAM: amine oxidase%3B FAD dependent oxidoreductase~KEGG: mxa:MXAN_6060 amine oxidase%2C flavin- containing gene gene5126 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5071 Amir_5072 Amir_5072 Amir_5072 6048948 6050303 + Endo-1%2C4-beta-xylanase KEGG: endo-1%2C4-beta-xylanase%3B K01181 endo-1%2C4-beta-xylanase~PFAM: glycoside hydrolase family 10%3B cellulose- binding family II~SMART: glycoside hydrolase family 10%3B cellulose- binding family II gene gene5127 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5072 Amir_5073 Amir_5073 Amir_5073 6050307 6050840 - hypothetical protein gene gene5128 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5073 Amir_5074 Amir_5074 Amir_5074 6050919 6051722 - glycoside hydrolase family 16 PFAM: glycoside hydrolase family 16~KEGG: glycoside hydrolase%2C putative gene gene5129 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5074 Amir_5075 Amir_5075 Amir_5075 6051936 6052802 - transcriptional regulator%2C LysR family TIGRFAM: transcriptional regulator%2C ArgP family~PFAM: regulatory protein LysR~KEGG: bav:BAV0190 lysine export transcriptional regulator gene gene5130 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5075 Amir_5076 Amir_5076 Amir_5076 6053389 6053505 + hypothetical protein gene gene5131 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5076 Amir_5077 Amir_5077 Amir_5077 6053634 6054221 + Lysine exporter protein (LYSE/YGGA) PFAM: Lysine exporter protein (LYSE/YGGA)~KEGG: smt:Smal_1176 lysine exporter protein (LysE/YggA) gene gene5132 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5077 Amir_5078 Amir_5078 Amir_5078 6054346 6054978 + bifunctional deaminase-reductase domain protein PFAM: bifunctional deaminase-reductase domain protein~KEGG: ade:Adeh_1010 bifunctional deaminase- reductase-like gene gene5133 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5078 Amir_5079 Amir_5079 Amir_5079 6055514 6056065 + hypothetical protein KEGG: bcm:Bcenmc03_6355 outer membrane autotransporter gene gene5134 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5079 Amir_5080 Amir_5080 Amir_5080 6056116 6056865 - transcriptional regulator%2C IclR family KEGG: bac:BamMC406_5247 IclR family transcriptional regulator~TIGRFAM: beta-ketoadipate pathway transcriptional regulators%2C PcaR/PcaU/PobR family~PFAM: Transcriptional regulator IclR%3B regulatory protein IclR~SMART: regulatory protein IclR gene gene5135 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5080 Amir_5081 Amir_5081 Amir_5081 6056858 6057226 - Carboxymuconolactone decarboxylase PFAM: Carboxymuconolactone decarboxylase~KEGG: mlo:mlr7207 gamma carboxymuconolactone decarboxylase gene gene5136 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5081 Amir_5082 Amir_5082 Amir_5082 6057223 6057333 - hypothetical protein gene gene5137 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5082 Amir_5083 Amir_5083 Amir_5083 6057442 6058224 - 3-oxoadipate enol-lactonase TIGRFAM: 3-oxoadipate enol-lactonase~PFAM: alpha/beta hydrolase fold~KEGG: swi:Swit_0978 3-oxoadipate enol-lactonase gene gene5138 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5083 Amir_5084 Amir_5084 Amir_5084 6058199 6058765 - protocatechuate 3%2C4-dioxygenase%2C alpha subunit KEGG: reh:H16_B2290 protocatechuate 3%2C4-dioxygenase alpha chain~TIGRFAM: protocatechuate 3%2C4-dioxygenase%2C alpha subunit~PFAM: intradiol ring-cleavage dioxygenase gene gene5139 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5084 Amir_5085 Amir_5085 Amir_5085 6058758 6059474 - protocatechuate 3%2C4-dioxygenase%2C beta subunit KEGG: pfo:Pfl01_1270 protocatechuate 3%2C4- dioxygenase%2C beta subunit~TIGRFAM: protocatechuate 3%2C4-dioxygenase%2C beta subunit~PFAM: intradiol ring-cleavage dioxygenase gene gene5140 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5085 Amir_5086 Amir_5086 Amir_5086 6059528 6060283 - Glutaconate CoA-transferase PFAM: coenzyme A transferase~KEGG: xcv:XCV0379 glutaconate CoA transferase subunit B gene gene5141 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5086 Amir_5087 Amir_5087 Amir_5087 6060280 6061077 - coenzyme A transferase PFAM: coenzyme A transferase~KEGG: pag:PLES_02231 putative CoA transferase%2C subunit A gene gene5142 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5087 Amir_5088 Amir_5088 Amir_5088 6061235 6061837 + hypothetical protein KEGG: noc:Noc_2708 hypothetical protein gene gene5143 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5088 Amir_5089 Amir_5089 Amir_5089 6061834 6065136 + AAA ATPase SMART: AAA ATPase~KEGG: met:M446_5114 AAA ATPase gene gene5144 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5089 Amir_5090 Amir_5090 Amir_5090 6065558 6067021 - protein serine/threonine phosphatase PFAM: Stage II sporulation E family protein~SMART: protein phosphatase 2C domain protein~KEGG: gsu:GSU0700 sensory box/response regulator gene gene5145 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5090 Amir_5091 Amir_5091 Amir_5091 6067224 6071663 + GAF sensor hybrid histidine kinase KEGG: ank:AnaeK_4253 GAF sensor hybrid histidine kinase~PFAM: ATP-binding region ATPase domain protein%3B response regulator receiver%3B GAF domain protein%3B histidine kinase A domain protein%3B histidine kinase HAMP region domain protein~SMART: ATP-binding region ATPase domain protein%3B response regulator receiver%3B histidine kinase A domain protein%3B GAF domain protein%3B histidine kinase HAMP region domain protein gene gene5146 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5091 Amir_5092 Amir_5092 Amir_5092 6071713 6072039 - anti-sigma-factor antagonist TIGRFAM: anti-anti-sigma factor~PFAM: Sulfate transporter/antisigma-factor antagonist STAS~KEGG: mca:MCA1686 anti-sigma B factor antagonist gene gene5147 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5092 Amir_5093 Amir_5093 Amir_5093 6072173 6072571 + putative anti-sigma regulatory factor%2C serine/threonine protein kinase PFAM: ATP-binding region ATPase domain protein~KEGG: met:M446_2753 signal transduction histidine kinase gene gene5148 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5093 Amir_5094 Amir_5094 Amir_5094 6073230 6074144 + Ppx/GppA phosphatase PFAM: Ppx/GppA phosphatase~KEGG: acp:A2cp1_0693 Ppx/GppA phosphatase gene gene5149 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5094 Amir_5095 Amir_5095 Amir_5095 6074158 6074544 + anti-sigma-factor antagonist TIGRFAM: anti-anti-sigma factor~PFAM: Sulfate transporter/antisigma-factor antagonist STAS~KEGG: sus:Acid_2843 anti-sigma-factor antagonist gene gene5150 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5095 Amir_5096 Amir_5096 Amir_5096 6074578 6074958 + hypothetical protein gene gene5151 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5096 Amir_5097 Amir_5097 Amir_5097 6074970 6075452 + GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: pzu:PHZ_c2921 acetyltransferase%2C GNAT family gene gene5152 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5097 Amir_5098 Amir_5098 Amir_5098 6075665 6076804 + Luciferase-like monooxygenase PFAM: Luciferase-like monooxygenase~KEGG: mpo:Mpop_1275 putative dehydrogenase protein gene gene5153 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5098 Amir_5099 Amir_5099 Amir_5099 6076852 6077040 + hypothetical protein gene gene5154 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5099 Amir_5100 Amir_5100 Amir_5100 6077133 6077522 - TIMP2%3B TIMP metallopeptidase inhibitor 2 KEGG: TIMP2%3B TIMP metallopeptidase inhibitor 2 gene gene5155 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5100 Amir_5101 Amir_5101 Amir_5101 6077591 6077713 + hypothetical protein gene gene5156 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5101 Amir_5102 Amir_5102 Amir_5102 6077809 6078789 + transcriptional regulator%2C LacI family KEGG: vei:Veis_1391 periplasmic binding protein/LacI transcriptional regulator~PFAM: regulatory protein LacI%3B periplasmic binding protein/LacI transcriptional regulator~SMART: regulatory protein LacI gene gene5157 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5102 Amir_5103 Amir_5103 Amir_5103 6078905 6079810 + peptidase U61 LD-carboxypeptidase A PFAM: peptidase U61 LD-carboxypeptidase A~KEGG: peptidase U61%2C LD-carboxypeptidase A gene gene5158 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5103 Amir_5104 Amir_5104 Amir_5104 6080073 6080927 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B KR domain protein%3B NAD-dependent epimerase/dehydratase~KEGG: pag:PLES_17341 putative short chain dehydrogenase gene gene5159 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5104 Amir_5105 Amir_5105 Amir_5105 6080997 6081590 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: met:M446_2111 TetR family transcriptional regulator gene gene5160 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5105 Amir_5106 Amir_5106 Amir_5106 6081622 6082356 - hypothetical protein gene gene5161 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5106 Amir_5107 Amir_5107 Amir_5107 6082824 6083339 + chitin-binding domain 3 protein PFAM: chitin-binding domain 3 protein~KEGG: hch:HCH_03973 N-acetylglucosamine-binding protein A gene gene5162 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5107 Amir_5108 Amir_5108 Amir_5108 6083782 6083946 + hypothetical protein gene gene5163 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5108 Amir_5109 Amir_5109 Amir_5109 6083946 6085697 + hypothetical protein KEGG: GK22681 gene product from transcript GK22681- RA gene gene5164 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5109 Amir_5110 Amir_5110 Amir_5110 6086748 6086921 - CsbD family protein PFAM: CsbD family protein~KEGG: pen:PSEEN4005 hypothetical protein gene gene5165 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5110 Amir_5111 Amir_5111 Amir_5111 6087207 6087698 + ANTAR domain protein with unknown sensor PFAM: ANTAR domain protein gene gene5166 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5111 Amir_5112 Amir_5112 Amir_5112 6087647 6089539 - malto-oligosyltrehalose trehalohydrolase KEGG: gsu:GSU2358 isoamylase family protein~TIGRFAM: malto-oligosyltrehalose trehalohydrolase~PFAM: alpha amylase catalytic region~SMART: alpha amylase catalytic sub domain gene gene5167 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5112 Amir_5113 Amir_5113 Amir_5113 6089536 6091785 - malto-oligosyltrehalose synthase KEGG: reu:Reut_B4234 alpha amylase domain- containing protein~TIGRFAM: malto-oligosyltrehalose synthase~PFAM: alpha amylase catalytic region~SMART: alpha amylase catalytic sub domain gene gene5168 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5113 Amir_5114 Amir_5114 Amir_5114 6091782 6093908 - glycogen debranching enzyme GlgX KEGG: nmu:Nmul_A1401 glycogen debranching protein GlgX~TIGRFAM: glycogen debranching enzyme GlgX~PFAM: glycoside hydrolase family 13 domain protein%3B alpha amylase catalytic region~SMART: alpha amylase catalytic sub domain gene gene5169 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5114 Amir_5115 Amir_5115 Amir_5115 6094069 6094407 - hypothetical protein gene gene5170 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5115 Amir_5116 Amir_5116 Amir_5116 6094512 6096590 - 4-alpha-glucanotransferase KEGG: bpt:Bpet2366 hypothetical protein~TIGRFAM: 4-alpha-glucanotransferase~PFAM: glycoside hydrolase family 77 gene gene5171 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5116 Amir_5117 Amir_5117 Amir_5117 6096709 6097671 - transcriptional regulator%2C LacI family PFAM: regulatory protein LacI%3B periplasmic binding protein/LacI transcriptional regulator~SMART: regulatory protein LacI~KEGG: sme:SM_b20014 putative transcriptional regulator protein gene gene5172 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5117 Amir_5118 Amir_5118 Amir_5118 6097783 6098235 + alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen%3B Redoxin domain protein~KEGG: afw:Anae109_2778 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen gene gene5173 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5118 Amir_5119 Amir_5119 Amir_5119 6098239 6099222 - Luciferase-like monooxygenase PFAM: Luciferase-like monooxygenase~KEGG: pzu:PHZ_c2545 5%2C10- methylenetetrahydromethanopterin reductase gene gene5174 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5119 Amir_5120 Amir_5120 Amir_5120 6099506 6100372 - Peptidase M23 PFAM: Peptidase M23~KEGG: pde:Pden_4473 peptidase M23B gene gene5175 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5120 Amir_5121 Amir_5121 Amir_5121 6100961 6103042 - glycosyl transferase family 51 PFAM: glycosyl transferase family 51%3B penicillin- binding protein transpeptidase~KEGG: rce:RC1_2700 penicillin-binding protein%2C 1A family gene gene5176 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5121 Amir_5122 Amir_5122 Amir_5122 6103337 6104380 - PfkB domain protein PFAM: PfkB domain protein~KEGG: sme:SM_b21462 putative sugar kinase protein gene gene5177 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5122 Amir_5123 Amir_5123 Amir_5123 6104393 6105124 - RNA polymerase%2C sigma-24 subunit%2C ECF subfamily TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family~PFAM: sigma-70 region 2 domain protein%3B Sigma-70 region 4 type 2%3B sigma-70 region 4 domain protein~KEGG: pla:Plav_0951 ECF subfamily RNA polymerase sigma-24 factor gene gene5178 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5123 Amir_5124 Amir_5124 Amir_5124 6105572 6106390 + alpha/beta hydrolase fold protein PFAM: alpha/beta hydrolase fold~KEGG: mrd:Mrad2831_0619 alpha/beta hydrolase fold gene gene5179 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5124 Amir_5125 Amir_5125 Amir_5125 6106442 6106627 + pseudogene gene5180 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5125 Amir_5126 Amir_5126 Amir_5126 6106632 6107186 + conserved hypothetical protein KEGG: pap:PSPA7_5262 hypothetical protein gene gene5181 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5126 Amir_5127 Amir_5127 Amir_5127 6107179 6108075 - transcriptional regulator%2C LysR family PFAM: regulatory protein LysR%3B LysR substrate- binding~KEGG: ade:Adeh_2212 LysR family transcriptional regulator gene gene5182 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5127 Amir_5128 Amir_5128 Amir_5128 6108096 6108908 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: mlo:mll2997 short chain dehydrogenase gene gene5183 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5128 Amir_5129 Amir_5129 Amir_5129 6108954 6109718 - transcriptional regulator%2C DeoR family PFAM: regulatory protein DeoR%3B regulatory protein GntR HTH~SMART: regulatory protein DeoR~KEGG: aba:Acid345_0659 transcriptional regulator%2C DeoR family gene gene5184 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5129 Amir_5130 Amir_5130 Amir_5130 6109816 6110553 + conserved hypothetical protein KEGG: bha:BH0227 hypothetical protein gene gene5185 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5130 Amir_5131 Amir_5131 Amir_5131 6111091 6113037 - ABC transporter related PFAM: ABC transporter related%3B ABC transporter transmembrane region~SMART: AAA ATPase~KEGG: sat:SYN_01564 phospholipid-lipopolysaccharide ABC transporter gene gene5186 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5131 Amir_5132 Amir_5132 Amir_5132 6113533 6114342 - Enoyl-CoA hydratase/isomerase PFAM: Enoyl-CoA hydratase/isomerase~KEGG: dal:Dalk_3354 enoyl-CoA hydratase/isomerase gene gene5187 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5132 Amir_5133 Amir_5133 Amir_5133 6114412 6114621 - transcriptional regulator gene gene5188 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5133 Amir_5134 Amir_5134 Amir_5134 6114785 6116413 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: scl:sce6041 ABC transporter%2C ATP-binding protein gene gene5189 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5134 Amir_5135 Amir_5135 Amir_5135 6116622 6117377 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B KR domain protein~KEGG: pzu:PHZ_c3135 oxidoreductase%2C short-chain dehydrogenase/reductase family gene gene5190 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5135 Amir_5136 Amir_5136 Amir_5136 6117418 6117855 - hypothetical protein KEGG: scl:sce9133 putative secreted protein gene gene5191 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5136 Amir_5137 Amir_5137 Amir_5137 6117848 6118363 - RNA polymerase%2C sigma-24 subunit%2C ECF subfamily TIGRFAM: RNA polymerase sigma-70 factor%2C sigma-E family%3B RNA polymerase sigma factor%2C sigma-70 family~PFAM: Sigma-70 region 4 type 2%3B sigma-70 region 2 domain protein%3B sigma-70 region 4 domain protein~KEGG: xau:Xaut_1595 ECF subfamily RNA polymerase sigma-24 factor gene gene5192 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5137 Amir_5138 Amir_5138 Amir_5138 6118368 6118742 - hypothetical protein KEGG: similar to mucin 2%3B K10955 intestinal mucin- 2 gene gene5193 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5138 Amir_5139 Amir_5139 Amir_5139 6118859 6119437 - hypothetical protein KEGG: bur:Bcep18194_A4859 hypothetical protein gene gene5194 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5139 Amir_5140 Amir_5140 Amir_5140 6119672 6120649 + hypothetical protein gene gene5195 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5140 Amir_5141 Amir_5141 Amir_5141 6120837 6123653 - Proprotein convertase P PFAM: Proprotein convertase P~KEGG: aba:Acid345_4222 hypothetical protein gene gene5196 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5141 Amir_5142 Amir_5142 Amir_5142 6123800 6125368 - deoxyguanosinetriphosphate triphosphohydrolase KEGG: aba:Acid345_0225 deoxyguanosinetriphosphate triphosphohydrolase~TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase~PFAM: metal-dependent phosphohydrolase HD sub domain~SMART: metal-dependent phosphohydrolase HD region gene gene5197 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5142 Amir_5143 Amir_5143 Amir_5143 6131515 6132954 + putative integral membrane sensor protein PFAM: MASE1 domain protein~KEGG: sse:Ssed_3344 signal transduction protein gene gene5202 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5143 Amir_5144 Amir_5144 Amir_5144 6132958 6134037 + lycopene cyclase family protein TIGRFAM: lycopene cyclase family protein~PFAM: Lycopene beta and epsilon cyclase~KEGG: hypothetical protein%3B K06443 lycopene beta cyclase gene gene5203 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5144 Amir_5145 Amir_5145 Amir_5145 6134080 6135777 + diguanylate cyclase/phosphodiesterase KEGG: cti:RALTA_B1157 putative diguanylate cyclase (GGDEF domain) and C-di-GMP phosphodiesterase (EAL domain))~TIGRFAM: diguanylate cyclase~PFAM: EAL domain protein%3B GGDEF domain containing protein~SMART: EAL domain protein%3B GGDEF domain containing protein gene gene5204 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5145 Amir_5146 Amir_5146 Amir_5146 6135991 6137112 + glutamate--cysteine ligase GCS2 PFAM: glutamate--cysteine ligase GCS2~KEGG: jan:Jann_1911 carboxylate-amine ligase gene gene5205 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5146 Amir_5147 Amir_5147 Amir_5147 6137184 6137597 + putative signal transduction protein with CBS domains PFAM: CBS domain containing protein~SMART: CBS domain containing protein~KEGG: bph:Bphy_4760 CBS domain-containing protein gene gene5206 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5147 Amir_5148 Amir_5148 Amir_5148 6137682 6138077 - protein of unknown function DUF59 PFAM: protein of unknown function DUF59~KEGG: eli:ELI_12745 metal-sulfur cluster biosynthetic enzyme gene gene5207 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5148 Amir_5149 Amir_5149 Amir_5149 6138074 6138517 - SUF system FeS assembly protein%2C NifU family TIGRFAM: SUF system FeS assembly protein%2C NifU family~PFAM: nitrogen-fixing NifU domain protein~KEGG: bsu:BSU32680 hypothetical protein gene gene5208 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5149 Amir_5150 Amir_5150 Amir_5150 6138517 6139794 - cysteine desulfurase%2C SufS subfamily TIGRFAM: cysteine desulfurase%2C SufS subfamily~PFAM: aminotransferase class V~KEGG: acr:Acry_2269 SufS subfamily cysteine desulfurase gene gene5209 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5150 Amir_5151 Amir_5151 Amir_5151 6139858 6140631 - FeS assembly ATPase SufC KEGG: bat:BAS4851 ABC transporter%2C ATP-binding protein~TIGRFAM: FeS assembly ATPase SufC~PFAM: ABC transporter related~SMART: AAA ATPase gene gene5210 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5151 Amir_5152 Amir_5152 Amir_5152 6140669 6140995 - Rieske (2Fe-2S) domain protein PFAM: Rieske [2Fe-2S] domain protein~KEGG: bmn:BMA10247_A0236 aromatic-ring- hydroxylating dioxygenase%2C ferredoxin subunit gene gene5211 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5152 Amir_5153 Amir_5153 Amir_5153 6140992 6142164 - FeS assembly protein SufD TIGRFAM: FeS assembly protein SufD~PFAM: SufBD protein~KEGG: mxa:MXAN_1155 FeS assembly protein SufD gene gene5212 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5153 Amir_5154 Amir_5154 Amir_5154 6142166 6143611 - FeS assembly protein SufB TIGRFAM: FeS assembly protein SufB~PFAM: SufBD protein~KEGG: bcz:BCZK4703 iron-regulated ABC transporter gene gene5213 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5154 Amir_5155 Amir_5155 Amir_5155 6143608 6144324 - putative transcriptional regulator PFAM: Helix-turn-helix type 11 domain protein~KEGG: ypk:y4095 hypothetical protein gene gene5214 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5155 Amir_5156 Amir_5156 Amir_5156 6144522 6145559 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: mxa:MXAN_0865 oxidoreductase%2C short chain dehydrogenase/reductase family gene gene5215 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5156 Amir_5157 Amir_5157 Amir_5157 6145570 6146151 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: msl:Msil_3313 transcriptional regulator%2C TetR family gene gene5216 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5157 Amir_5158 Amir_5158 Amir_5158 6146256 6147839 + hypothetical protein KEGG: met:M446_4899 hypothetical protein gene gene5217 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5158 Amir_5159 Amir_5159 Amir_5159 6147996 6151958 + Patatin PFAM: Patatin~KEGG: bpm:BURPS1710b_1675 patatin family phospholipase gene gene5218 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5159 Amir_5160 Amir_5160 Amir_5160 6151901 6154303 - glycosyl transferase group 1 PFAM: glycosyl transferase group 1~KEGG: lpc:LPC_1061 glycosyltransferase gene gene5219 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5160 Amir_5161 Amir_5161 Amir_5161 6154300 6154911 - hypothetical protein KEGG: dvm:DvMF_2468 molybdopterin-containing oxidoreductase membrane anchor subunit gene gene5220 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5161 Amir_5162 Amir_5162 Amir_5162 6155048 6155986 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: mxa:MXAN_1597 ABC transporter%2C ATP-binding protein gene gene5221 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5162 Amir_5163 Amir_5163 Amir_5163 6155983 6156756 + ABC-2 type transporter PFAM: ABC-2 type transporter~KEGG: scl:sce5572 putative integral membrane transport protein gene gene5222 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5163 Amir_5164 Amir_5164 Amir_5164 6156972 6157802 + hypothetical protein KEGG: Sfrs15%3B splicing factor%2C arginine/serine-rich 15 gene gene5223 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5164 Amir_5165 Amir_5165 Amir_5165 6157799 6158122 + hypothetical protein gene gene5224 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5165 Amir_5166 Amir_5166 Amir_5166 6158126 6159247 + hypothetical protein KEGG: pfo:Pfl01_4833 chemotaxis sensory transducer gene gene5225 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5166 Amir_5167 Amir_5167 Amir_5167 6159247 6160092 + hypothetical protein gene gene5226 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5167 Amir_5168 Amir_5168 Amir_5168 6160290 6161258 + cytochrome oxidase assembly PFAM: cytochrome oxidase assembly~KEGG: noc:Noc_3040 cytochrome oxidase assembly gene gene5227 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5168 Amir_5169 Amir_5169 Amir_5169 6161201 6161659 - regulatory protein ArsR SMART: regulatory protein ArsR~KEGG: scl:sce6114 hypothetical protein gene gene5228 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5169 Amir_5170 Amir_5170 Amir_5170 6161792 6162595 - protein of unknown function DUF742 PFAM: protein of unknown function DUF742~KEGG: Hypothetical protein CBG22207 gene gene5229 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5170 Amir_5171 Amir_5171 Amir_5171 6162606 6163049 - Roadblock/LC7 family protein PFAM: Roadblock/LC7 family protein~KEGG: pna:Pnap_0367 roadblock/LC7 family protein gene gene5230 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5171 Amir_5172 Amir_5172 Amir_5172 6163046 6166117 - putative sensor with HAMP domain PFAM: ATP-binding region ATPase domain protein%3B histidine kinase HAMP region domain protein~SMART: ATP-binding region ATPase domain protein~KEGG: rpe:RPE_2275 peptidase C14%2C caspase catalytic subunit P20 gene gene5231 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5172 Amir_5173 Amir_5173 Amir_5173 6166459 6166878 + protein of unknown function DUF485 PFAM: protein of unknown function DUF485~KEGG: sus:Acid_0924 hypothetical protein gene gene5232 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5173 Amir_5174 Amir_5174 Amir_5174 6166878 6168455 + SSS sodium solute transporter superfamily TIGRFAM: SSS sodium solute transporter superfamily~PFAM: Na+/solute symporter~KEGG: dvm:DvMF_0315 SSS sodium solute transporter superfamily gene gene5233 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5174 Amir_5175 Amir_5175 Amir_5175 6168549 6169409 - conserved hypothetical protein KEGG: tmz:Tmz1t_1794 hypothetical protein gene gene5234 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5175 Amir_5176 Amir_5176 Amir_5176 6169406 6169693 - hypothetical protein gene gene5235 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5176 Amir_5177 Amir_5177 Amir_5177 6169708 6171339 + protein of unknown function DUF885 PFAM: protein of unknown function DUF885~KEGG: mxa:MXAN_0186 putative lipoprotein gene gene5236 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5177 Amir_5178 Amir_5178 Amir_5178 6171538 6172509 + Alcohol dehydrogenase zinc-binding domain protein PFAM: Alcohol dehydrogenase zinc-binding domain protein%3B Alcohol dehydrogenase GroES domain protein~KEGG: bte:BTH_II0233 quinone oxidoreductase gene gene5237 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5178 Amir_5179 Amir_5179 Amir_5179 6172660 6173247 - peptidylprolyl isomerase FKBP-type PFAM: peptidylprolyl isomerase FKBP-type~KEGG: scl:sce3796 FKBP-type peptidyl-prolyl cis- trans isomerase gene gene5238 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5179 Amir_5180 Amir_5180 Amir_5180 6173453 6174460 + hypothetical protein gene gene5239 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5180 Amir_5181 Amir_5181 Amir_5181 6174467 6175114 + hypothetical protein gene gene5240 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5181 Amir_5182 Amir_5182 Amir_5182 6175382 6176020 + hypothetical protein KEGG: bsu:BSU21890 hypothetical protein gene gene5241 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5182 Amir_5183 Amir_5183 Amir_5183 6176139 6176789 + RNA polymerase%2C sigma-24 subunit%2C ECF subfamily TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family~PFAM: sigma-70 region 2 domain protein%3B Sigma-70 region 4 type 2%3B sigma-70 region 4 domain protein~KEGG: mno:Mnod_5360 RNA polymerase%2C sigma-24 subunit%2C ECF subfamily gene gene5242 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5183 Amir_5184 Amir_5184 Amir_5184 6177402 6177782 + conserved hypothetical protein KEGG: eca:ECA0122 hypothetical protein gene gene5243 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5184 Amir_5185 Amir_5185 Amir_5185 6177895 6178818 - protoheme IX farnesyltransferase TIGRFAM: protoheme IX farnesyltransferase~PFAM: UbiA prenyltransferase~KEGG: rce:RC1_3632 protoheme IX farnesyltransferase gene gene5244 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5185 Amir_5186 Amir_5186 Amir_5186 6179098 6181191 + transketolase TIGRFAM: transketolase~PFAM: Transketolase central region%3B Transketolase domain protein~KEGG: pna:Pnap_4499 transketolase gene gene5245 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5186 Amir_5187 Amir_5187 Amir_5187 6181224 6182336 + transaldolase TIGRFAM: transaldolase~PFAM: Transaldolase~KEGG: aba:Acid345_2810 bifunctional transaldolase/phosoglucose isomerase gene gene5246 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5187 Amir_5188 Amir_5188 Amir_5188 6182339 6183958 + phosphoglucose isomerase (PGI) PFAM: phosphoglucose isomerase (PGI)~KEGG: mno:Mnod_7445 transaldolase gene gene5247 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5188 Amir_5189 Amir_5189 Amir_5189 6183955 6185496 + glucose-6-phosphate 1-dehydrogenase KEGG: scl:sce4355 hypothetical protein~TIGRFAM: glucose-6-phosphate 1-dehydrogenase~PFAM: glucose-6-phosphate dehydrogenase gene gene5248 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5189 Amir_5190 Amir_5190 Amir_5190 6185493 6186632 + OpcA protein TIGRFAM: OpcA protein~KEGG: sus:Acid_5280 glucose-6-P dehydrogenase subunit-like protein gene gene5249 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5190 Amir_5191 Amir_5191 Amir_5191 6186629 6187408 + 6-phosphogluconolactonase TIGRFAM: 6-phosphogluconolactonase~PFAM: glucosamine/galactosamine-6-phosphate isomerase~KEGG: gdi:GDI0291 6-phosphogluconolactonase gene gene5250 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5191 Amir_5192 Amir_5192 Amir_5192 6187858 6189195 + histidine kinase PFAM: histidine kinase dimerization and phosphoacceptor region%3B ATP-binding region ATPase domain protein~KEGG: scl:sce5432 putative two-component system sensor kinase gene gene5251 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5192 Amir_5193 Amir_5193 Amir_5193 6189582 6190907 - hypothetical protein KEGG: GI19648 gene product from transcript GI19648- RA gene gene5252 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5193 Amir_5194 Amir_5194 Amir_5194 6190952 6191893 + hypothetical protein KEGG: YALI0C10450p gene gene5253 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5194 Amir_5195 Amir_5195 Amir_5195 6191977 6192273 - hypothetical protein gene gene5254 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5195 Amir_5196 Amir_5196 Amir_5196 6192373 6192606 - preprotein translocase%2C SecG subunit TIGRFAM: preprotein translocase%2C SecG subunit~PFAM: Preprotein translocase SecG subunit~KEGG: pne:Pnec_0820 preprotein translocase%2C SecG subunit gene gene5255 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5196 Amir_5197 Amir_5197 Amir_5197 6192700 6193485 - triosephosphate isomerase KEGG: bsu:BSU33920 triosephosphate isomerase~TIGRFAM: triosephosphate isomerase~PFAM: triosephosphate isomerase gene gene5256 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5197 Amir_5198 Amir_5198 Amir_5198 6193487 6194653 - Phosphoglycerate kinase PFAM: phosphoglycerate kinase~KEGG: bsu:BSU33930 phosphoglycerate kinase gene gene5257 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5198 Amir_5199 Amir_5199 Amir_5199 6194673 6195677 - glyceraldehyde-3-phosphate dehydrogenase%2C type I KEGG: bha:BH3560 glyceraldehyde-3-phosphate dehydrogenase~TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase%2C type I~PFAM: glyceraldehyde 3-phosphate dehydrogenase gene gene5258 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5199 Amir_5200 Amir_5200 Amir_5200 6196043 6197023 - hypothetical protein KEGG: PHC10%3B cell wall protein pherophorin-C10 gene gene5259 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5200 Amir_5201 Amir_5201 Amir_5201 6197113 6197244 - hypothetical protein gene gene5260 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5201 Amir_5202 Amir_5202 Amir_5202 6197329 6198534 - hypothetical protein KEGG: scl:sce6476 hypothetical protein gene gene5261 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5202 Amir_5203 Amir_5203 Amir_5203 6198662 6199648 - protein of unknown function DUF199 PFAM: protein of unknown function DUF199~KEGG: bsu:BSU34750 hypothetical protein gene gene5262 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5203 Amir_5204 Amir_5204 Amir_5204 6199639 6200691 - protein of unknown function UPF0052 and CofD PFAM: protein of unknown function UPF0052 and CofD~KEGG: afw:Anae109_2613 protein of unknown function UPF0052 and CofD gene gene5263 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5204 Amir_5205 Amir_5205 Amir_5205 6200688 6201575 - conserved hypothetical protein PFAM: conserved hypothetical protein~KEGG: afw:Anae109_0152 hypothetical protein gene gene5264 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5205 Amir_5206 Amir_5206 Amir_5206 6201572 6203521 - excinuclease ABC%2C C subunit KEGG: tgr:Tgr7_1907 excinuclease ABC subunit C~TIGRFAM: excinuclease ABC%2C C subunit~PFAM: excinuclease ABC C subunit domain protein%3B Excinuclease ABC C subunit domain protein%3B helix-hairpin- helix motif%3B UvrB/UvrC protein~SMART: Excinuclease ABC C subunit domain protein%3B Helix-hairpin-helix DNA-binding class 1 gene gene5265 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5206 Amir_5207 Amir_5207 Amir_5207 6203863 6204378 - Rieske (2Fe-2S) domain protein PFAM: Rieske [2Fe-2S] domain protein~KEGG: bxe:Bxe_B1329 putative dioxygenase%2C ferredoxin reductase component gene gene5266 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5207 Amir_5208 Amir_5208 Amir_5208 6204629 6205039 - Rieske (2Fe-2S) domain protein PFAM: Rieske [2Fe-2S] domain protein~KEGG: xcv:XCV3420 putative Rieske 2Fe-2S family protein gene gene5267 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5208 Amir_5209 Amir_5209 Amir_5209 6205919 6206410 - hypothetical protein gene gene5268 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5209 Amir_5210 Amir_5210 Amir_5210 6206655 6208247 + transcriptional regulator%2C XRE family gene gene5269 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5210 Amir_5211 Amir_5211 Amir_5211 6208247 6208744 + conserved hypothetical protein KEGG: bxe:Bxe_C1257 hypothetical protein gene gene5270 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5211 Amir_5212 Amir_5212 Amir_5212 6208808 6209761 + Helix-turn-helix type 11 domain protein PFAM: Helix-turn-helix type 11 domain protein~KEGG: scl:sce5223 DeoR family transcriptional regulator gene gene5271 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5212 Amir_5213 Amir_5213 Amir_5213 6209768 6210709 - hypothetical protein gene gene5272 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5213 Amir_5214 Amir_5214 Amir_5214 6210709 6211206 - RNA polymerase%2C sigma-24 subunit%2C ECF subfamily TIGRFAM: RNA polymerase sigma-70 factor%2C sigma-E family%3B RNA polymerase sigma factor%2C sigma-70 family~PFAM: sigma-70 region 4 domain protein%3B Sigma-70 region 4 type 2%3B sigma-70 region 2 domain protein~KEGG: pca:Pcar_3124 RNA polymerase%2C sigma-E factor gene gene5273 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5214 Amir_5215 Amir_5215 Amir_5215 6211360 6212712 - peptidase M28 PFAM: peptidase M28%3B peptidase M20~KEGG: bcy:Bcer98_3876 peptidase M28 gene gene5274 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5215 Amir_5216 Amir_5216 Amir_5216 6212815 6213291 - hypothetical protein gene gene5275 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5216 Amir_5217 Amir_5217 Amir_5217 6213288 6213770 - 6%2C7-dimethyl-8-ribityllumazine synthase KEGG: dds:Ddes_1621 6%2C7-dimethyl-8-ribityllumazine synthase~TIGRFAM: 6%2C7-dimethyl-8-ribityllumazine synthase~PFAM: 67-dimethyl-8-ribityllumazine synthase gene gene5276 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5217 Amir_5218 Amir_5218 Amir_5218 6213767 6215020 - 3%2C4-dihydroxy-2-butanone 4-phosphate synthase KEGG: ATGCH%3B ATGCH (ARABIDOPSIS THALIANA GTP CYCLOHYDROLASE II)%3B 3%2C4-dihydroxy-2-butanone-4-phosphate synthase/ GTP cyclohydrolase II~TIGRFAM: 3%2C4-dihydroxy-2-butanone 4-phosphate synthase%3B GTP cyclohydrolase II~PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase%3B GTP cyclohydrolase II gene gene5277 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5218 Amir_5219 Amir_5219 Amir_5219 6215017 6215655 - riboflavin synthase%2C alpha subunit TIGRFAM: riboflavin synthase%2C alpha subunit~PFAM: Lumazine-binding protein~KEGG: hap:HAPS_1135 riboflavin synthase subunit alpha gene gene5278 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5219 Amir_5220 Amir_5220 Amir_5220 6215763 6216413 - ribulose-phosphate 3-epimerase KEGG: sat:SYN_01763 ribulose-phosphate 3-epimerase~TIGRFAM: ribulose-phosphate 3-epimerase~PFAM: ribulose-phosphate 3-epimerase%3B Orotidine 5'- phosphate decarboxylase gene gene5279 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5220 Amir_5221 Amir_5221 Amir_5221 6216688 6218796 - hypothetical protein KEGG: acp:A2cp1_3940 TPR repeat-containing protein gene gene5280 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5221 Amir_5222 Amir_5222 Amir_5222 6218903 6219448 - flavoprotein PFAM: flavoprotein~KEGG: xau:Xaut_0078 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase gene gene5281 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5222 Amir_5223 Amir_5223 Amir_5223 6219516 6220952 - Fmu (Sun) domain protein PFAM: Fmu (Sun) domain protein%3B NusB/RsmB/TIM44~KEGG: ade:Adeh_3970 NusB/RsmB/TIM44 family protein gene gene5282 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5223 Amir_5224 Amir_5224 Amir_5224 6220949 6221881 - methionyl-tRNA formyltransferase TIGRFAM: methionyl-tRNA formyltransferase~PFAM: formyl transferase domain protein~KEGG: mca:MCA2844 methionyl-tRNA formyltransferase gene gene5283 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5224 Amir_5225 Amir_5225 Amir_5225 6221883 6222428 - peptide deformylase KEGG: aba:Acid345_4287 peptide deformylase~TIGRFAM: peptide deformylase~PFAM: formylmethionine deformylase gene gene5284 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5225 Amir_5226 Amir_5226 Amir_5226 6223044 6223148 + hypothetical protein gene gene5285 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5226 Amir_5227 Amir_5227 Amir_5227 6223159 6223293 - hypothetical protein gene gene5286 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5227 Amir_5228 Amir_5228 Amir_5228 6223507 6224046 + RNA polymerase%2C sigma-24 subunit%2C ECF subfamily TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family~PFAM: sigma-70 region 2 domain protein%3B Sigma-70 region 4 type 2%3B sigma-70 region 4 domain protein~KEGG: pla:Plav_1868 RNA polymerase sigma factor RpoE gene gene5287 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5228 Amir_5229 Amir_5229 Amir_5229 6224515 6225216 + hypothetical protein gene gene5288 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5229 Amir_5230 Amir_5230 Amir_5230 6225194 6225622 + RNA polymerase%2C sigma-24 subunit%2C ECF subfamily TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family~PFAM: Sigma-70 region 4 type 2~KEGG: pzu:PHZ_c1529 RNA polymerase sigma-70 factor%2CECF subfamily gene gene5289 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5230 Amir_5231 Amir_5231 Amir_5231 6225619 6226830 + hypothetical protein gene gene5290 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5231 Amir_5232 Amir_5232 Amir_5232 6226930 6228747 - gamma-glutamyltransferase KEGG: scl:sce1211 gamma-glutamyltransferase~TIGRFAM: gamma-glutamyltransferase~PFAM: gamma-glutamyltranspeptidase gene gene5291 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5232 Amir_5233 Amir_5233 Amir_5233 6228957 6229259 + hypothetical protein KEGG: hypothetical protein gene gene5292 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5233 Amir_5234 Amir_5234 Amir_5234 6229267 6231264 - Primosomal protein N' (replication factor Y) - superfamily II helicase-like protein KEGG: bav:BAV3210 primosomal protein N' gene gene5293 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5234 Amir_5235 Amir_5235 Amir_5235 6231334 6232536 - S-adenosylmethionine synthetase KEGG: bha:BH3300 S-adenosylmethionine synthetase~TIGRFAM: S-adenosylmethionine synthetase~PFAM: S-adenosylmethionine synthetase gene gene5294 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5235 Amir_5236 Amir_5236 Amir_5236 6232619 6233887 - phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase KEGG: acp:A2cp1_1587 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase~TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase~PFAM: DNA/pantothenate metabolism flavoprotein domain protein%3B flavoprotein gene gene5295 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5236 Amir_5237 Amir_5237 Amir_5237 6233884 6234162 - DNA-directed RNA polymerase%2C omega subunit TIGRFAM: DNA-directed RNA polymerase%2C omega subunit~PFAM: RNA polymerase Rpb6~KEGG: rma:Rmag_0405 DNA-directed RNA polymerase%2C omega subunit gene gene5296 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5237 Amir_5238 Amir_5238 Amir_5238 6234290 6234889 - guanylate kinase KEGG: bcy:Bcer98_2523 guanylate kinase~TIGRFAM: guanylate kinase~PFAM: guanylate kinase~SMART: guanylate kinase/L-type calcium channel region gene gene5297 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5238 Amir_5239 Amir_5239 Amir_5239 6234886 6235203 - hypothetical protein gene gene5298 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5239 Amir_5240 Amir_5240 Amir_5240 6235512 6236330 - orotidine 5'-phosphate decarboxylase TIGRFAM: orotidine 5'-phosphate decarboxylase~PFAM: Orotidine 5'-phosphate decarboxylase~KEGG: mxa:MXAN_5910 orotidine 5'-phosphate decarboxylase gene gene5299 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5240 Amir_5241 Amir_5241 Amir_5241 6236327 6239626 - carbamoyl-phosphate synthase%2C large subunit TIGRFAM: carbamoyl-phosphate synthase%2C large subunit~PFAM: Carbamoyl-phosphate synthase L chain ATP- binding%3B RimK domain protein ATP-grasp%3B MGS domain protein%3B ATP-grasp domain protein%3B Carbamoyl-phosphate synthetase large chain oligomerisation%3B Carbamoyl- phosphate synthetase large chain domain protein~KEGG: gur:Gura_1864 carbamoyl-phosphate synthase%2C large subunit gene gene5300 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5241 Amir_5242 Amir_5242 Amir_5242 6239628 6240740 - carbamoyl-phosphate synthase%2C small subunit KEGG: smt:Smal_1811 carbamoyl-phosphate synthase%2C small subunit~TIGRFAM: carbamoyl-phosphate synthase%2C small subunit~PFAM: Carbamoyl-phosphate synthase small chain%3B glutamine amidotransferase class-I gene gene5301 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5242 Amir_5243 Amir_5243 Amir_5243 6240737 6241228 - hypothetical protein gene gene5302 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5243 Amir_5244 Amir_5244 Amir_5244 6241225 6242526 - dihydroorotase%2C multifunctional complex type KEGG: scl:sce4269 dihydroorotase~TIGRFAM: dihydroorotase%2C multifunctional complex type~PFAM: amidohydrolase%3B Amidohydrolase 3 gene gene5303 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5244 Amir_5245 Amir_5245 Amir_5245 6242523 6243458 - aspartate carbamoyltransferase TIGRFAM: aspartate carbamoyltransferase~PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain%3B aspartate/ornithine carbamoyltransferase Asp/Orn-binding region~KEGG: scl:sce3822 hypothetical protein gene gene5304 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5245 Amir_5246 Amir_5246 Amir_5246 6243455 6244027 - Uracil phosphoribosyltransferase PFAM: phosphoribosyltransferase~KEGG: gsu:GSU1270 pyrimidine regulatory protein PyrR gene gene5305 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5246 Amir_5247 Amir_5247 Amir_5247 6244286 6244774 + transcriptional regulator%2C XRE family PFAM: helix-turn-helix domain protein~SMART: helix-turn-helix domain protein~KEGG: pzu:PHZ_c2067 transcriptional regulator%2C Cro/CI family gene gene5306 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5247 Amir_5248 Amir_5248 Amir_5248 6245175 6245594 - NusB antitermination factor TIGRFAM: transcription antitermination factor NusB~PFAM: NusB/RsmB/TIM44~KEGG: mxa:MXAN_4761 transcription antitermination factor NusB gene gene5307 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5248 Amir_5249 Amir_5249 Amir_5249 6245596 6246159 - translation elongation factor P TIGRFAM: translation elongation factor P~PFAM: Elongation factor KOW domain protein%3B Elongation factor P%3B Elongation factor P/YeiP protein~KEGG: bha:BH2799 elongation factor P gene gene5308 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5249 Amir_5250 Amir_5250 Amir_5250 6246215 6247312 - peptidase M24 PFAM: peptidase M24%3B creatinase~KEGG: sus:Acid_7433 peptidase M24 gene gene5309 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5250 Amir_5251 Amir_5251 Amir_5251 6247785 6249296 - hypothetical protein KEGG: mrd:Mrad2831_3019 hypothetical protein gene gene5310 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5251 Amir_5252 Amir_5252 Amir_5252 6249782 6250222 - 3-dehydroquinate dehydratase%2C type II KEGG: pen:PSEEN2021 3-dehydroquinate dehydratase~TIGRFAM: 3-dehydroquinate dehydratase%2C type II~PFAM: dehydroquinase class II gene gene5311 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5252 Amir_5253 Amir_5253 Amir_5253 6250219 6251325 - 3-dehydroquinate synthase KEGG: pnu:Pnuc_0088 3-dehydroquinate synthase~TIGRFAM: 3-dehydroquinate synthase~PFAM: 3-dehydroquinate synthase gene gene5312 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5253 Amir_5254 Amir_5254 Amir_5254 6252277 6252792 - Shikimate kinase PFAM: shikimate kinase~KEGG: pen:PSEEN0334 shikimate kinase gene gene5313 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5254 Amir_5255 Amir_5255 Amir_5255 6252789 6253988 - chorismate synthase KEGG: scl:sce4843 chorismate synthase~TIGRFAM: chorismate synthase~PFAM: chorismate synthase gene gene5314 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5255 Amir_5256 Amir_5256 Amir_5256 6254941 6255525 - peptidase A24A prepilin type IV PFAM: peptidase A24A prepilin type IV~KEGG: hha:Hhal_2022 prepilin peptidase gene gene5315 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5256 Amir_5257 Amir_5257 Amir_5257 6255717 6256175 - PTS system%2C glucose subfamily%2C IIA subunit TIGRFAM: PTS system%2C glucose subfamily%2C IIA subunit~PFAM: sugar-specific permease EIIA 1 domain~KEGG: bsu:BSU39270 phosphotransferase system (PTS) beta-glucoside-specific enzyme IIBCA component gene gene5316 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5257 Amir_5258 Amir_5258 Amir_5258 6256172 6256408 - phosphotransferase system PTS EIIB protein PFAM: phosphotransferase system PTS EIIB protein~KEGG: esa:ESA_00528 hypothetical protein gene gene5317 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5258 Amir_5259 Amir_5259 Amir_5259 6256582 6257346 + transcriptional regulator%2C GntR family PFAM: UbiC transcription regulator-associated domain protein%3B regulatory protein GntR HTH~SMART: regulatory protein GntR HTH~KEGG: bha:BH0419 GntR family transcriptional regulator gene gene5318 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5259 Amir_5260 Amir_5260 Amir_5260 6257343 6258641 + Protein-N(pi)-phosphohistidine--sugarphosphotran sferase PFAM: phosphotransferase system EIIC~KEGG: bha:BH0422 PTS system%2C N-acetylglucosamine- specific enzyme II%2C ABC component gene gene5319 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5260 Amir_5261 Amir_5261 Amir_5261 6258660 6258932 + Phosphotransferase system%2C phosphocarrier protein HPr TIGRFAM: phosphocarrier%2C HPr family~PFAM: phosphoryl transfer system HPr~KEGG: aeh:Mlg_2234 HPr family phosphocarrier protein gene gene5320 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5261 Amir_5262 Amir_5262 Amir_5262 6259027 6259884 - shikimate-5-dehydrogenase TIGRFAM: shikimate-5-dehydrogenase~PFAM: Shikimate dehydrogenase substrate binding domain protein%3B Shikimate/quinate 5-dehydrogenase~KEGG: nha:Nham_1109 shikimate 5-dehydrogenase gene gene5321 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5262 Amir_5263 Amir_5263 Amir_5263 6259865 6261094 - aminodeoxychorismate lyase PFAM: aminodeoxychorismate lyase~KEGG: gme:Gmet_3021 aminodeoxychorismate lyase gene gene5322 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5263 Amir_5264 Amir_5264 Amir_5264 6261091 6261603 - Holliday junction resolvase YqgF PFAM: Holliday junction resolvase YqgF~SMART: Resolvase RNase H domain protein fold~KEGG: bha:BH1269 hypothetical protein gene gene5323 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5264 Amir_5265 Amir_5265 Amir_5265 6261590 6264262 - alanyl-tRNA synthetase KEGG: afr:AFE_0934 alanyl-tRNA synthetase~TIGRFAM: alanyl-tRNA synthetase~PFAM: alanyl-tRNA synthetase class IIc%3B phosphoesterase DHHA1%3B Threonyl/alanyl tRNA synthetase SAD gene gene5324 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5265 Amir_5266 Amir_5266 Amir_5266 6264317 6264580 - hypothetical protein gene gene5325 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5266 Amir_5267 Amir_5267 Amir_5267 6264577 6264984 - hypothetical protein gene gene5326 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5267 Amir_5268 Amir_5268 Amir_5268 6265231 6265353 + hypothetical protein gene gene5327 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5268 Amir_5269 Amir_5269 Amir_5269 6265354 6266541 + Cupin 4 family protein PFAM: Cupin 4 family protein~SMART: transcription factor jumonji jmjC domain protein~KEGG: jan:Jann_0385 cupin 4 gene gene5328 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5269 Amir_5270 Amir_5270 Amir_5270 6266592 6267536 + Sucraseferredoxin family protein PFAM: Sucraseferredoxin family protein~KEGG: hch:HCH_03459 hypothetical protein gene gene5329 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5270 Amir_5271 Amir_5271 Amir_5271 6267852 6268616 - Methyltransferase type 12 PFAM: Methyltransferase type 12%3B Methyltransferase type 11~KEGG: sfu:Sfum_2834 methyltransferase type 12 gene gene5330 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5271 Amir_5272 Amir_5272 Amir_5272 6268687 6270033 - AAA ATPase central domain protein PFAM: AAA ATPase central domain protein%3B magnesium chelatase ChlI subunit%3B ATPase associated with various cellular activities AAA_5~SMART: AAA ATPase~KEGG: gsu:GSU2067 recombination factor protein RarA gene gene5331 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5272 Amir_5273 Amir_5273 Amir_5273 6270146 6270784 + Uridine kinase-like protein KEGG: hypothetical protein%3B K00876 uridine kinase gene gene5332 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5273 Amir_5274 Amir_5274 Amir_5274 6271178 6273661 + DEAD/DEAH box helicase domain protein PFAM: DEAD/DEAH box helicase domain protein%3B helicase domain protein%3B type III restriction protein res subunit~SMART: DEAD-like helicase%3B helicase domain protein~KEGG: scl:sce4364 putative ATP-dependent helicase gene gene5333 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5274 Amir_5275 Amir_5275 Amir_5275 6273904 6276873 + transcriptional regulator%2C SARP family PFAM: transcriptional activator domain%3B TPR repeat- containing protein%3B NB-ARC domain protein%3B transcriptional regulator domain protein~SMART: AAA ATPase%3B Tetratricopeptide domain protein~KEGG: scl:sce5225 protein kinase gene gene5334 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5275 Amir_5276 Amir_5276 Amir_5276 6277215 6277832 - Transglycosylase domain protein PFAM: Transglycosylase domain protein%3B Peptidoglycan-binding LysM~SMART: Peptidoglycan-binding LysM~KEGG: ade:Adeh_2701 peptidoglycan-binding LysM gene gene5335 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5276 Amir_5277 Amir_5277 Amir_5277 6278228 6278500 + hypothetical protein gene gene5336 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5277 Amir_5278 Amir_5278 Amir_5278 6278537 6279382 + two component transcriptional regulator%2C LytTR family PFAM: LytTr DNA-binding region%3B response regulator receiver~SMART: response regulator receiver~KEGG: rpi:Rpic_1227 two component transcriptional regulator%2C LytTR family gene gene5337 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5278 Amir_5279 Amir_5279 Amir_5279 6279379 6279813 + protein of unknown function DUF485 PFAM: protein of unknown function DUF485 gene gene5338 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5279 Amir_5280 Amir_5280 Amir_5280 6279810 6281531 + Na+/solute symporter PFAM: Na+/solute symporter~KEGG: ade:Adeh_3696 SSS family solute/sodium (Na+) symporter gene gene5339 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5280 Amir_5281 Amir_5281 Amir_5281 6281528 6282703 + signal transduction histidine kinase%2C LytS PFAM: histidine kinase internal region%3B GAF domain protein%3B ATP-binding region ATPase domain protein~SMART: ATP-binding region ATPase domain protein~KEGG: gme:Gmet_2698 histidine kinase internal region gene gene5340 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5281 Amir_5282 Amir_5282 Amir_5282 6282803 6283177 - conserved hypothetical protein KEGG: rle:RL1216 hypothetical protein gene gene5341 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5282 Amir_5283 Amir_5283 Amir_5283 6283261 6283815 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: rlt:Rleg2_5162 transcriptional regulator%2C TetR family gene gene5342 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5283 Amir_5284 Amir_5284 Amir_5284 6283907 6284491 - hypothetical protein KEGG: bvi:Bcep1808_7569 transposase and inactivated derivatives-like protein gene gene5343 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5284 Amir_5285 Amir_5285 Amir_5285 6284674 6285519 + metallophosphoesterase PFAM: metallophosphoesterase~KEGG: scl:sce5059 metallophosphoesterase gene gene5344 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5285 Amir_5286 Amir_5286 Amir_5286 6285516 6286172 + 4'-phosphopantetheinyl transferase PFAM: 4'-phosphopantetheinyl transferase~KEGG: gdi:GDI2832 putative phosphopantetheinyl transferase PptA gene gene5345 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5286 Amir_5287 Amir_5287 Amir_5287 6286242 6287723 + CBS domain-containing protein KEGG: swd:Swoo_0692 CBS domain-containing protein gene gene5346 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5287 Amir_5288 Amir_5288 Amir_5288 6287965 6289797 + SMC domain protein PFAM: SMC domain protein~KEGG: ecw:EcE24377A_3363 hypothetical protein gene gene5347 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5288 Amir_5289 Amir_5289 Amir_5289 6290127 6290963 - Enoyl-CoA hydratase/isomerase PFAM: Enoyl-CoA hydratase/isomerase~KEGG: spe:Spro_3591 enoyl-CoA hydratase/isomerase gene gene5348 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5289 Amir_5290 Amir_5290 Amir_5290 6291107 6291490 + transcriptional regulator%2C HxlR family PFAM: helix-turn-helix HxlR type~KEGG: transcriptional regulator protein gene gene5349 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5290 Amir_5291 Amir_5291 Amir_5291 6291487 6291816 - hypothetical protein gene gene5350 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5291 Amir_5292 Amir_5292 Amir_5292 6292020 6292427 - hypothetical protein gene gene5351 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5292 Amir_5293 Amir_5293 Amir_5293 6292427 6293101 - hypothetical protein KEGG: xcv:XCV1426 hypothetical protein gene gene5352 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5293 Amir_5294 Amir_5294 Amir_5294 6293171 6293743 - isopentenyl-diphosphate delta-isomerase%2C type 1 KEGG: kpn:KPN_03317 isopentenyl-diphosphate delta- isomerase~TIGRFAM: isopentenyl-diphosphate delta-isomerase%2C type 1~PFAM: NUDIX hydrolase gene gene5353 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5294 Amir_5295 Amir_5295 Amir_5295 6293798 6294367 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: mno:Mnod_1181 transcriptional regulator%2C TetR family gene gene5354 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5295 Amir_5296 Amir_5296 Amir_5296 6294444 6295292 + Methyltransferase type 11 PFAM: Methyltransferase type 11%3B Methyltransferase type 12~KEGG: rlt:Rleg2_1533 methyltransferase type 12 gene gene5355 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5296 Amir_5297 Amir_5297 Amir_5297 6296166 6297128 - Alcohol dehydrogenase GroES domain protein PFAM: Alcohol dehydrogenase GroES domain protein%3B Alcohol dehydrogenase zinc-binding domain protein~KEGG: bxe:Bxe_C1266 putative alcohol dehydrogenase gene gene5356 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5297 Amir_5298 Amir_5298 Amir_5298 6297234 6298163 + transcriptional regulator%2C AraC family PFAM: helix-turn-helix- domain containing protein AraC type~SMART: helix-turn-helix- domain containing protein AraC type~KEGG: mmw:Mmwyl1_2496 helix-turn-helix domain- containing protein gene gene5357 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5298 Amir_5299 Amir_5299 Amir_5299 6298310 6299056 + hypothetical protein gene gene5358 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5299 Amir_5300 Amir_5300 Amir_5300 6299047 6299460 + hypothetical protein gene gene5359 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5300 Amir_5301 Amir_5301 Amir_5301 6299539 6300297 - hypothetical protein KEGG: rpc:RPC_1516 hypothetical protein gene gene5360 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5301 Amir_5302 Amir_5302 Amir_5302 6300294 6301490 - hypothetical protein KEGG: Trpm4%3B transient receptor potential cation channel%2C subfamily M%2C member 4%3B K04979 transient receptor potential cation channel%2C subfamily M%2C member 4 gene gene5361 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5302 Amir_5303 Amir_5303 Amir_5303 6301664 6303055 + oxidoreductase KEGG: xca:xccb100_0630 oxidoreductase gene gene5362 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5303 Amir_5304 Amir_5304 Amir_5304 6303143 6306604 + AAA ATPase SMART: AAA ATPase~KEGG: bbr:BB2829 hypothetical protein gene gene5363 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5304 Amir_5305 Amir_5305 Amir_5305 6307215 6307934 + LPXTG-motif cell wall anchor domain protein TIGRFAM: LPXTG-motif cell wall anchor domain protein~KEGG: predicted protein gene gene5364 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5305 Amir_5306 Amir_5306 Amir_5306 6308101 6309090 - Alcohol dehydrogenase GroES domain protein PFAM: Alcohol dehydrogenase GroES domain protein%3B Alcohol dehydrogenase zinc-binding domain protein~KEGG: scl:sce9297 putative zinc-binding dehydrogenase gene gene5365 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5306 Amir_5307 Amir_5307 Amir_5307 6309087 6309890 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: gdi:GDI2636 putative transporter protein gene gene5366 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5307 Amir_5308 Amir_5308 Amir_5308 6309887 6310771 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: bam:Bamb_2642 binding-protein-dependent transport systems inner membrane component gene gene5367 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5308 Amir_5309 Amir_5309 Amir_5309 6310806 6312149 - extracellular solute-binding protein family 1 PFAM: extracellular solute-binding protein family 1~KEGG: bac:BamMC406_2511 extracellular solute- binding protein gene gene5368 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5309 Amir_5310 Amir_5310 Amir_5310 6312231 6312992 - transcriptional regulator%2C DeoR family PFAM: regulatory protein DeoR~SMART: regulatory protein DeoR~KEGG: cak:Caul_0312 DeoR family transcriptional regulator gene gene5369 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5310 Amir_5311 Amir_5311 Amir_5311 6313722 6314243 - Enoyl-CoA hydratase/isomerase PFAM: Enoyl-CoA hydratase/isomerase~KEGG: cvi:CV_1553 enoyl-CoA hydratase gene gene5370 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5311 Amir_5312 Amir_5312 Amir_5312 6314325 6314918 + hypothetical protein gene gene5371 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5312 Amir_5313 Amir_5313 Amir_5313 6314998 6318039 + Lanthionine synthetase C family protein PFAM: Lanthionine synthetase C family protein~KEGG: mxa:MXAN_6388 lanthionine synthetase C family protein gene gene5372 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5313 Amir_5314 Amir_5314 Amir_5314 6318092 6318322 + conserved hypothetical protein KEGG: hypothetical protein gene gene5373 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5314 Amir_5315 Amir_5315 Amir_5315 6319267 6322164 + transcriptional regulator%2C LuxR family PFAM: regulatory protein LuxR~SMART: regulatory protein LuxR~KEGG: ade:Adeh_3289 SARP family transcriptional regulator gene gene5374 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5315 Amir_5316 Amir_5316 Amir_5316 6322251 6322949 + MOSC domain containing protein PFAM: MOSC domain containing protein~KEGG: mex:Mext_4291 MOSC domain-containing protein gene gene5375 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5316 Amir_5317 Amir_5317 Amir_5317 6322971 6323810 - aldo/keto reductase PFAM: aldo/keto reductase~KEGG: aba:Acid345_2253 aldo/keto reductase gene gene5376 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5317 Amir_5318 Amir_5318 Amir_5318 6324006 6324995 + hypothetical protein KEGG: rso:RS03172 putative signal peptide protein gene gene5377 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5318 Amir_5319 Amir_5319 Amir_5319 6325118 6325270 + pseudogene gene5378 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5319 Amir_5320 Amir_5320 Amir_5320 6325289 6327316 - phenylacetic acid degradation protein paaN TIGRFAM: phenylacetic acid degradation protein paaN~PFAM: MaoC domain protein dehydratase%3B Aldehyde Dehydrogenase~KEGG: pde:Pden_4804 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase gene gene5379 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5320 Amir_5321 Amir_5321 Amir_5321 6327469 6328749 + glycoside hydrolase family 16 PFAM: glycoside hydrolase family 16%3B Ricin B lectin~SMART: Ricin B lectin~KEGG: cja:CJA_2759 beta glucanase%2C putative%2C glu16F gene gene5380 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5321 Amir_5322 Amir_5322 Amir_5322 6328982 6329386 - hypothetical protein KEGG: hypothetical protein gene gene5381 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5322 Amir_5323 Amir_5323 Amir_5323 6329566 6332643 - transcriptional regulator%2C SARP family PFAM: transcriptional activator domain%3B TPR repeat- containing protein%3B Tetratricopeptide TPR_4%3B NB-ARC domain protein%3B transcriptional regulator domain protein%3B Tetratricopeptide TPR_2 repeat protein~SMART: Tetratricopeptide domain protein~KEGG: scl:sce6858 hypothetical protein gene gene5382 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5323 Amir_5324 Amir_5324 Amir_5324 6332870 6334897 - acyltransferase 3 PFAM: acyltransferase 3~KEGG: mes:Meso_0485 acyltransferase 3 gene gene5383 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5324 Amir_5325 Amir_5325 Amir_5325 6335295 6336191 - protein of unknown function DUF75 PFAM: protein of unknown function DUF75~KEGG: sfu:Sfum_3209 hypothetical protein gene gene5384 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5325 Amir_5326 Amir_5326 Amir_5326 6336478 6338442 + ABC transporter related PFAM: ABC transporter related%3B ABC transporter transmembrane region~SMART: AAA ATPase~KEGG: sat:SYN_01564 phospholipid-lipopolysaccharide ABC transporter gene gene5385 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5326 Amir_5327 Amir_5327 Amir_5327 6338502 6339098 + hypothetical protein KEGG: mch:Mchl_4435 methyl-accepting chemotaxis sensory transducer gene gene5386 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5327 Amir_5328 Amir_5328 Amir_5328 6339241 6340680 + putative transcriptional regulator%2C PucR family KEGG: bxe:Bxe_B2117 CdaR family transcriptional regulator gene gene5387 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5328 Amir_5329 Amir_5329 Amir_5329 6340818 6341435 + hypothetical protein KEGG: aba:Acid345_2313 hypothetical protein gene gene5388 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5329 Amir_5330 Amir_5330 Amir_5330 6341614 6342186 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: ade:Adeh_2298 TetR family transcriptional regulator gene gene5389 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5330 Amir_5331 Amir_5331 Amir_5331 6342287 6343165 + NAD-dependent epimerase/dehydratase PFAM: NAD-dependent epimerase/dehydratase%3B Male sterility domain%3B dTDP-4-dehydrorhamnose reductase~KEGG: acp:A2cp1_1649 NAD-dependent epimerase/dehydratase gene gene5390 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5331 Amir_5332 Amir_5332 Amir_5332 6343268 6344176 + pseudouridine synthase PFAM: pseudouridine synthase~KEGG: pmy:Pmen_1453 pseudouridine synthase gene gene5391 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5332 Amir_5333 Amir_5333 Amir_5333 6344234 6344854 - protein of unknown function DUF305 PFAM: protein of unknown function DUF305~KEGG: pag:PLES_26381 hypothetical protein gene gene5392 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5333 Amir_5334 Amir_5334 Amir_5334 6344924 6345712 - chitin-binding domain 3 protein PFAM: chitin-binding domain 3 protein%3B Carbohydrate- binding family V/XII~SMART: Carbohydrate-binding family V/XII~KEGG: hypothetical protein gene gene5393 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5334 Amir_5335 Amir_5335 Amir_5335 6346362 6346919 + hypothetical protein KEGG: glo:Glov_2382 alpha/beta hydrolase fold gene gene5394 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5335 Amir_5336 Amir_5336 Amir_5336 6347070 6348176 - Chitinase PFAM: glycoside hydrolase family 19~KEGG: cja:CJA_0996 chitinase%2C putative%2C chi19A gene gene5395 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5336 Amir_5337 Amir_5337 Amir_5337 6348544 6349017 - hypothetical protein KEGG: hha:Hhal_2194 alcohol dehydrogenase%2C zinc- binding domain protein gene gene5396 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5337 Amir_5338 Amir_5338 Amir_5338 6349014 6349259 - quinone oxidoreductase KEGG: mlo:mll2594 quinone oxidoreductase gene gene5397 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5338 Amir_5339 Amir_5339 Amir_5339 6349434 6352061 + glycoside hydrolase family 9 PFAM: glycoside hydrolase family 9%3B cellulose- binding family II%3B glycoside hydrolase family 9 domain protein Ig domain protein%3B Carbohydrate-binding CenC domain protein~SMART: cellulose-binding family II~KEGG: scl:sce2234 cellulase gene gene5398 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5339 Amir_5340 Amir_5340 Amir_5340 6352115 6352744 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: psa:PST_1446 oxidoreductase%2C short-chain dehydrogenase/reductase family gene gene5399 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5340 Amir_5341 Amir_5341 Amir_5341 6352953 6354005 + hypothetical protein KEGG: sus:Acid_4466 beta-lactamase gene gene5400 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5341 Amir_5342 Amir_5342 Amir_5342 6354255 6355676 + Dyp-type peroxidase family TIGRFAM: Dyp-type peroxidase family~KEGG: aba:Acid345_1379 hypothetical protein gene gene5401 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5342 Amir_5343 Amir_5343 Amir_5343 6356553 6357593 + transcriptional regulator%2C LacI family KEGG: pzu:PHZ_c2158 transcriptional regulator%2C LacI family~PFAM: periplasmic binding protein/LacI transcriptional regulator%3B regulatory protein LacI~SMART: regulatory protein LacI gene gene5402 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5343 Amir_5344 Amir_5344 Amir_5344 6357740 6359074 + protein of unknown function DUF21 PFAM: protein of unknown function DUF21%3B CBS domain containing protein%3B transporter-associated region~KEGG: pde:Pden_3115 protein of unknown function DUF21 gene gene5403 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5344 Amir_5345 Amir_5345 Amir_5345 6359071 6360117 + protein of unknown function DUF21 PFAM: protein of unknown function DUF21%3B CBS domain containing protein~KEGG: hps:HPSH_07635 hypothetical protein gene gene5404 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5345 Amir_5346 Amir_5346 Amir_5346 6360553 6361452 + hypothetical protein gene gene5405 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5346 Amir_5347 Amir_5347 Amir_5347 6361708 6363498 + von Willebrand factor type A SMART: von Willebrand factor type A~KEGG: hypothetical protein gene gene5406 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5347 Amir_5348 Amir_5348 Amir_5348 6363527 6363838 + pseudogene gene5407 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5348 Amir_5349 Amir_5349 Amir_5349 6363847 6364035 + hypothetical protein gene gene5408 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5349 Amir_5350 Amir_5350 Amir_5350 6364039 6364938 - transcriptional regulator%2C ArsR family PFAM: regulatory protein ArsR~SMART: regulatory protein ArsR~KEGG: mlo:mlr0745 transcriptional regulator gene gene5409 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5350 Amir_5351 Amir_5351 Amir_5351 6364996 6366201 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: sil:SPO1430 antibiotic efflux protein gene gene5410 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5351 Amir_5352 Amir_5352 Amir_5352 6366280 6369168 - glycine dehydrogenase KEGG: hch:HCH_03861 glycine dehydrogenase~TIGRFAM: glycine dehydrogenase~PFAM: glycine cleavage system P-protein gene gene5411 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5352 Amir_5353 Amir_5353 Amir_5353 6369652 6370218 - transcriptional regulator%2C MerR family SMART: regulatory protein MerR~KEGG: afw:Anae109_4225 MerR family transcriptional regulator gene gene5412 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5353 Amir_5354 Amir_5354 Amir_5354 6370603 6371076 - protein of unknown function DUF151 PFAM: protein of unknown function DUF151~KEGG: dal:Dalk_2411 protein of unknown function DUF151 gene gene5413 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5354 Amir_5355 Amir_5355 Amir_5355 6371222 6372163 - transcriptional regulator%2C MerR family PFAM: regulatory protein MerR~SMART: regulatory protein MerR~KEGG: ade:Adeh_3310 zinc finger/thioredoxin putative gene gene5414 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5355 Amir_5356 Amir_5356 Amir_5356 6372197 6372649 - FHA domain containing protein PFAM: Forkhead-associated protein~SMART: Forkhead-associated protein~KEGG: scl:sce2902 GGDEF domain-containing protein gene gene5415 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5356 Amir_5357 Amir_5357 Amir_5357 6372763 6373143 - glycine cleavage system H protein TIGRFAM: glycine cleavage system H protein~PFAM: glycine cleavage H-protein~KEGG: ank:AnaeK_2621 glycine cleavage system H protein gene gene5416 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5357 Amir_5358 Amir_5358 Amir_5358 6373202 6373813 - CDP-alcohol phosphatidyltransferase PFAM: CDP-alcohol phosphatidyltransferase~KEGG: tmz:Tmz1t_2031 CDP-diacylglycerol/glycerol-3- phosphate 3-phosphatidyltransferase gene gene5417 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5358 Amir_5359 Amir_5359 Amir_5359 6374316 6374522 - hypothetical protein gene gene5418 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5359 Amir_5360 Amir_5360 Amir_5360 6374938 6375354 + anti-sigma-factor antagonist TIGRFAM: anti-anti-sigma factor~PFAM: Sulfate transporter/antisigma-factor antagonist STAS~KEGG: mag:amb0333 anti-anti-sigma regulatory factor gene gene5419 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5360 Amir_5361 Amir_5361 Amir_5361 6375305 6376102 - putative anti-sigma regulatory factor%2C serine/threonine protein kinase PFAM: ATP-binding region ATPase domain protein~KEGG: dvm:DvMF_0253 putative signal transduction histidine kinase gene gene5420 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5361 Amir_5362 Amir_5362 Amir_5362 6376261 6376698 + putative anti-sigma regulatory factor%2C serine/threonine protein kinase KEGG: bsu:BSU04720 serine-protein kinase RsbW gene gene5421 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5362 Amir_5363 Amir_5363 Amir_5363 6376695 6377501 + RNA polymerase%2C sigma 28 subunit%2C Sig B/F/G subfamily TIGRFAM: RNA polymerase sigma-70 factor%2C sigma- B/F/G subfamily%3B RNA polymerase sigma factor%2C sigma-70 family~PFAM: sigma-70 region 2 domain protein%3B sigma-70 region 3 domain protein%3B Sigma-70 region 4 type 2%3B sigma- 70 region 4 domain protein~KEGG: bha:BH0529 RNA polymerase sigma factor SigB gene gene5422 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5363 Amir_5364 Amir_5364 Amir_5364 6377686 6377985 + transcription factor WhiB PFAM: transcription factor WhiB gene gene5423 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5364 Amir_5365 Amir_5365 Amir_5365 6378158 6378817 - conserved hypothetical protein KEGG: mxa:MXAN_2497 hypothetical protein gene gene5424 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5365 Amir_5366 Amir_5366 Amir_5366 6378900 6379853 + aldo/keto reductase PFAM: aldo/keto reductase~KEGG: mrd:Mrad2831_0318 aldo/keto reductase gene gene5425 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5366 Amir_5367 Amir_5367 Amir_5367 6379958 6380695 - hypothetical protein KEGG: hypothetical protein gene gene5426 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5367 Amir_5368 Amir_5368 Amir_5368 6381091 6382476 - hypothetical protein KEGG: afw:Anae109_0266 response regulator receiver gene gene5427 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5368 Amir_5369 Amir_5369 Amir_5369 6382614 6383333 - putative transmembrane anti-sigma factor KEGG: ank:AnaeK_0242 Fe-S oxidoreductase gene gene5428 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5369 Amir_5370 Amir_5370 Amir_5370 6383330 6383875 - RNA polymerase%2C sigma-24 subunit%2C ECF subfamily TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family~PFAM: sigma-70 region 2 domain protein%3B Sigma-70 region 4 type 2%3B sigma-70 region 4 domain protein~KEGG: rpb:RPB_0486 RNA polymerase sigma factor RpoE gene gene5429 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5370 Amir_5371 Amir_5371 Amir_5371 6384084 6384995 - hypothetical protein KEGG: hypothetical protein gene gene5430 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5371 Amir_5372 Amir_5372 Amir_5372 6385160 6385462 + transcriptional regulator%2C PadR-like family PFAM: transcriptional regulator PadR family protein~KEGG: rpt:Rpal_2803 transcriptional regulator%2C PadR- like family gene gene5431 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5372 Amir_5373 Amir_5373 Amir_5373 6385476 6386459 - Radical SAM domain protein PFAM: Radical SAM domain protein~KEGG: sat:SYN_02268 radical SAM superfamily protein gene gene5432 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5373 Amir_5374 Amir_5374 Amir_5374 6386659 6387315 + histidine kinase PFAM: ATP-binding region ATPase domain protein%3B histidine kinase dimerization and phosphoacceptor region~SMART: ATP-binding region ATPase domain protein~KEGG: oca:OCAR_4624 signal transduction histidine kinase containing PAS/PAC sensor domain gene gene5433 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5374 Amir_5375 Amir_5375 Amir_5375 6387312 6387968 + two component transcriptional regulator%2C LuxR family PFAM: response regulator receiver%3B regulatory protein LuxR~SMART: response regulator receiver%3B regulatory protein LuxR~KEGG: bcr:BCAH187_A1601 DNA-binding response regulator gene gene5434 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5375 Amir_5376 Amir_5376 Amir_5376 6388249 6388890 + transcriptional regulator%2C LuxR family PFAM: regulatory protein LuxR~SMART: regulatory protein LuxR~KEGG: bcy:Bcer98_1160 two component LuxR family transcriptional regulator gene gene5435 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5376 Amir_5377 Amir_5377 Amir_5377 6388993 6390333 - hypothetical protein KEGG: mucin-associated surface protein (MASP) gene gene5436 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5377 Amir_5378 Amir_5378 Amir_5378 6390443 6393643 - WD40 domain protein beta Propeller PFAM: WD40 domain protein beta Propeller~KEGG: hypothetical protein gene gene5437 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5378 Amir_5379 Amir_5379 Amir_5379 6393676 6394797 - putative FHA domain containing protein KEGG: mrd:Mrad2831_3727 translation initiation factor IF-2 gene gene5438 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5379 Amir_5380 Amir_5380 Amir_5380 6394794 6395333 - phage tail protein TIGRFAM: phage tail protein~KEGG: gsu:GSU0989 NHL repeat-containing protein gene gene5439 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5380 Amir_5381 Amir_5381 Amir_5381 6395330 6397264 - conserved hypothetical protein KEGG: gsu:GSU0988 hypothetical protein gene gene5440 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5381 Amir_5382 Amir_5382 Amir_5382 6397264 6397671 - GPW/gp25 family protein PFAM: GPW/gp25 family protein~KEGG: gsu:GSU0986 tail lysozyme%2C putative gene gene5441 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5382 Amir_5383 Amir_5383 Amir_5383 6397674 6397955 - PAAR repeat-containing protein PFAM: PAAR repeat-containing protein~KEGG: dar:Daro_3608 PaaR gene gene5442 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5383 Amir_5384 Amir_5384 Amir_5384 6398003 6399811 - Rhs element Vgr protein TIGRFAM: Rhs element Vgr protein~PFAM: Rhs element Vgr protein~KEGG: dsh:Dshi_2462 rhs element Vgr protein gene gene5443 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5384 Amir_5385 Amir_5385 Amir_5385 6399804 6400559 - Peptidoglycan-binding LysM PFAM: Peptidoglycan-binding LysM~SMART: Peptidoglycan-binding LysM~KEGG: sde:Sde_1041 hypothetical protein gene gene5444 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5385 Amir_5386 Amir_5386 Amir_5386 6400564 6400995 - conserved hypothetical protein TIGRFAM: conserved hypothetical protein~KEGG: noc:Noc_1873 phage tail region protein gene gene5445 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5386 Amir_5387 Amir_5387 Amir_5387 6401077 6403479 - hypothetical protein KEGG: NACA%2C TEBP%3B nascent polypeptide-associated complex alpha subunit gene gene5446 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5387 Amir_5388 Amir_5388 Amir_5388 6403486 6403632 - conserved hypothetical protein KEGG: mlo:msr6553 hypothetical protein gene gene5447 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5388 Amir_5389 Amir_5389 Amir_5389 6403629 6404042 - conserved hypothetical protein KEGG: gsu:GSU0977 hypothetical protein gene gene5448 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5389 Amir_5390 Amir_5390 Amir_5390 6404042 6404485 - conserved hypothetical protein TIGRFAM: conserved hypothetical protein~KEGG: gsu:GSU0976 hypothetical protein gene gene5449 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5390 Amir_5391 Amir_5391 Amir_5391 6404500 6406044 - tail sheath protein PFAM: tail sheath protein~KEGG: mlo:mlr6548 hypothetical protein gene gene5450 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5391 Amir_5392 Amir_5392 Amir_5392 6406289 6407020 - hypothetical protein KEGG: nha:Nham_0826 hypothetical protein gene gene5451 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5392 Amir_5393 Amir_5393 Amir_5393 6407067 6409115 - AAA ATPase central domain protein PFAM: AAA ATPase central domain protein~SMART: AAA ATPase~KEGG: gsu:GSU0972 AAA family ATPase gene gene5452 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5393 Amir_5394 Amir_5394 Amir_5394 6409112 6409699 - hypothetical protein KEGG: noc:Noc_1875 hypothetical protein gene gene5453 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5394 Amir_5395 Amir_5395 Amir_5395 6410006 6410854 + transcriptional regulator%2C XRE family PFAM: helix-turn-helix domain protein~SMART: helix-turn-helix domain protein gene gene5454 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5395 Amir_5396 Amir_5396 Amir_5396 6410851 6411051 + protein of unknown function DUF397 PFAM: protein of unknown function DUF397 gene gene5455 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5396 Amir_5397 Amir_5397 Amir_5397 6411057 6414092 - hypothetical protein KEGG: scl:sce3623 hypothetical protein gene gene5456 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5397 Amir_5398 Amir_5398 Amir_5398 6414473 6414841 + hypothetical protein gene gene5457 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5398 Amir_5399 Amir_5399 Amir_5399 6414838 6415569 + RNA polymerase%2C sigma 28 subunit%2C Sig B/F/G subfamily TIGRFAM: RNA polymerase sigma-70 factor%2C sigma- B/F/G subfamily%3B RNA polymerase sigma factor%2C sigma-70 family~PFAM: sigma-70 region 4 domain protein%3B sigma-70 region 2 domain protein%3B Sigma-70 region 4 type 2%3B sigma- 70 region 3 domain protein~KEGG: bha:BH0529 RNA polymerase sigma factor SigB gene gene5458 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5399 Amir_5400 Amir_5400 Amir_5400 6415585 6416061 + hypothetical protein KEGG: mpt:Mpe_A0228 hypothetical protein gene gene5459 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5400 Amir_5401 Amir_5401 Amir_5401 6416153 6417079 + hypothetical protein KEGG: mca:MCA0157 hypothetical protein gene gene5460 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5401 Amir_5402 Amir_5402 Amir_5402 6417303 6418394 + glutamate--cysteine ligase GCS2 PFAM: glutamate--cysteine ligase GCS2~KEGG: sus:Acid_3926 carboxylate-amine ligase gene gene5461 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5402 Amir_5403 Amir_5403 Amir_5403 6418455 6418811 + anti-sigma-factor antagonist TIGRFAM: anti-anti-sigma factor~PFAM: Sulfate transporter/antisigma-factor antagonist STAS~KEGG: swi:Swit_1492 anti-sigma-factor antagonist gene gene5462 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5403 Amir_5404 Amir_5404 Amir_5404 6419020 6419364 - hypothetical protein gene gene5463 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5404 Amir_5405 Amir_5405 Amir_5405 6419495 6419938 - hypothetical protein KEGG: rru:Rru_A3720 polysaccharide biosynthesis protein gene gene5464 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5405 Amir_5406 Amir_5406 Amir_5406 6419935 6420552 - ThiJ/PfpI domain protein PFAM: ThiJ/PfpI domain protein~KEGG: bca:BCE_3203 ThiJ/PfpI family protein gene gene5465 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5406 Amir_5407 Amir_5407 Amir_5407 6420660 6421601 + transcriptional regulator%2C AraC family PFAM: ThiJ/PfpI domain protein%3B helix-turn-helix- domain containing protein AraC type~SMART: helix-turn-helix- domain containing protein AraC type~KEGG: scl:sce6302 AraC family transcriptional regulator gene gene5466 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5407 Amir_5408 Amir_5408 Amir_5408 6421844 6423712 + serine/threonine protein kinase PFAM: Serine/threonine protein kinase-related%3B tyrosine protein kinase~SMART: serine/threonine protein kinase%3B tyrosine protein kinase~KEGG: mxa:MXAN_3338 serine/threonine protein kinase gene gene5467 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5408 Amir_5409 Amir_5409 Amir_5409 6423709 6424185 - CMP/dCMP deaminase zinc-binding PFAM: CMP/dCMP deaminase zinc-binding~KEGG: smt:Smal_3461 CMP/dCMP deaminase zinc-binding gene gene5468 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5409 Amir_5410 Amir_5410 Amir_5410 6424241 6424756 - hypothetical protein KEGG: ade:Adeh_3063 VCBS gene gene5469 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5410 Amir_5411 Amir_5411 Amir_5411 6424892 6427513 - Tetratricopeptide TPR_4 PFAM: Tetratricopeptide TPR_4~SMART: Tetratricopeptide domain protein~KEGG: sus:Acid_3454 tetratricopeptide TPR_4 gene gene5470 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5411 Amir_5412 Amir_5412 Amir_5412 6427591 6428805 + peptidase S8 and S53 subtilisin kexin sedolisin PFAM: peptidase S8 and S53 subtilisin kexin sedolisin~KEGG: ade:Adeh_0234 peptidase S8 and S53%2C subtilisin%2C kexin%2C sedolisin gene gene5471 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5412 Amir_5413 Amir_5413 Amir_5413 6428968 6429627 + RNA polymerase%2C sigma-24 subunit%2C ECF subfamily TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family~PFAM: sigma-70 region 2 domain protein~KEGG: sus:Acid_3455 ECF subfamily RNA polymerase sigma-24 factor gene gene5472 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5413 Amir_5414 Amir_5414 Amir_5414 6429611 6430048 + hypothetical protein gene gene5473 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5414 Amir_5415 Amir_5415 Amir_5415 6430567 6432522 + diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) KEGG: azo:azo0950 GGEF/EAL/PAS/PAC-domain- containing protein~TIGRFAM: diguanylate cyclase%3B PAS sensor protein~PFAM: GGDEF domain containing protein%3B EAL domain protein%3B PAS fold-4 domain protein~SMART: GGDEF domain containing protein%3B PAC repeat- containing protein gene gene5474 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5415 Amir_5416 Amir_5416 Amir_5416 6432628 6433215 - protein of unknown function ATP binding PFAM: protein of unknown function ATP binding%3B Miro domain protein~KEGG: dac:Daci_0776 protein of unknown function ATP binding gene gene5475 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5416 Amir_5417 Amir_5417 Amir_5417 6433254 6433676 - Roadblock/LC7 family protein PFAM: Roadblock/LC7 family protein~KEGG: pna:Pnap_2813 roadblock/LC7 family protein gene gene5476 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5417 Amir_5418 Amir_5418 Amir_5418 6433673 6436855 - putative sensor with HAMP domain PFAM: ATP-binding region ATPase domain protein%3B histidine kinase HAMP region domain protein~SMART: ATP-binding region ATPase domain protein~KEGG: dvm:DvMF_1114 methyl-accepting chemotaxis sensory transducer gene gene5477 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5418 Amir_5419 Amir_5419 Amir_5419 6437119 6438156 - NMT1/THI5 like domain protein PFAM: NMT1/THI5 like domain protein~KEGG: bbt:BBta_5981 ABC transporter substrate- binding protein gene gene5478 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5419 Amir_5420 Amir_5420 Amir_5420 6438347 6439549 + 4-hydroxybenzoate 3-monooxygenase PFAM: monooxygenase FAD-binding~KEGG: mno:Mnod_7086 4-hydroxybenzoate 3- monooxygenase gene gene5479 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5420 Amir_5421 Amir_5421 Amir_5421 6440358 6441242 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ABC transporter gene gene5480 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5421 Amir_5422 Amir_5422 Amir_5422 6441244 6442053 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ABC transporter%2C permease protein gene gene5481 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5422 Amir_5423 Amir_5423 Amir_5423 6442050 6442946 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: bbt:BBta_1369 ABC transporter membrane protein gene gene5482 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5423 Amir_5424 Amir_5424 Amir_5424 6442998 6443234 - hypothetical protein gene gene5483 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5424 Amir_5425 Amir_5425 Amir_5425 6443568 6444308 - pseudouridine synthase PFAM: pseudouridine synthase%3B RNA-binding S4 domain protein~SMART: RNA-binding S4 domain protein~KEGG: sat:SYN_02856 RNA pseudouridylate synthase S4 domain-containing protein gene gene5484 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5425 Amir_5426 Amir_5426 Amir_5426 6444301 6444882 - chromosome segregation and condensation protein%2C ScpB TIGRFAM: segregation and condensation protein B~PFAM: chromosome segregation and condensation protein ScpB~KEGG: sus:Acid_6490 condensin subunit ScpB gene gene5485 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5426 Amir_5427 Amir_5427 Amir_5427 6444879 6445814 - chromosome segregation and condensation protein ScpA PFAM: chromosome segregation and condensation protein ScpA~KEGG: mxa:MXAN_3841 segregation and condensation protein A gene gene5486 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5427 Amir_5428 Amir_5428 Amir_5428 6445811 6446380 - hypothetical protein KEGG: similar to Williams syndrome transcription factor gene gene5487 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5428 Amir_5429 Amir_5429 Amir_5429 6446377 6447345 - Cobyrinic acid ac-diamide synthase PFAM: Cobyrinic acid ac-diamide synthase~KEGG: bcb:BCB4264_A5607 sporulation initiation inhibitor protein Soj gene gene5488 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5429 Amir_5430 Amir_5430 Amir_5430 6447438 6447770 - transcriptional regulator%2C ArsR family PFAM: regulatory protein ArsR~SMART: regulatory protein ArsR~KEGG: bca:BCE_2079 ArsR family transcriptional regulator gene gene5489 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5430 Amir_5431 Amir_5431 Amir_5431 6447935 6448834 - tyrosine recombinase XerD TIGRFAM: tyrosine recombinase XerD~PFAM: integrase family protein%3B integrase domain protein SAM domain protein~KEGG: acp:A2cp1_2258 tyrosine recombinase XerD gene gene5490 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5431 Amir_5432 Amir_5432 Amir_5432 6448917 6449501 + protein of unknown function DUF1707 PFAM: protein of unknown function DUF1707%3B TM2 domain containing protein?~KEGG: scl:sce7607 TM2 domain-containing protein gene gene5491 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5432 Amir_5433 Amir_5433 Amir_5433 6449649 6450074 - conserved hypothetical protein KEGG: pca:Pcar_0371 hypothetical protein gene gene5492 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5433 Amir_5434 Amir_5434 Amir_5434 6450314 6450955 - NUDIX hydrolase PFAM: NUDIX hydrolase~KEGG: dol:Dole_1905 NUDIX hydrolase gene gene5493 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5434 Amir_5435 Amir_5435 Amir_5435 6450997 6452766 - CTP synthase KEGG: bha:BH3792 CTP synthetase~TIGRFAM: CTP synthase~PFAM: CTP synthase-like%3B glutamine amidotransferase class-I gene gene5494 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5435 Amir_5436 Amir_5436 Amir_5436 6452963 6453889 - hypothetical protein KEGG: acp:A2cp1_3214 PE-PGRS family protein gene gene5495 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5436 Amir_5437 Amir_5437 Amir_5437 6453895 6455079 - putative membrane-anchored protein KEGG: bha:BH2771 hypothetical protein gene gene5496 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5437 Amir_5438 Amir_5438 Amir_5438 6455221 6456480 - hypothetical protein gene gene5497 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5438 Amir_5439 Amir_5439 Amir_5439 6456790 6458568 - DNA repair protein RecN TIGRFAM: DNA repair protein RecN~PFAM: SMC domain protein~KEGG: acp:A2cp1_0769 DNA repair protein RecN gene gene5498 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5439 Amir_5440 Amir_5440 Amir_5440 6458607 6459509 - NAD(+) kinase PFAM: ATP-NAD/AcoX kinase~KEGG: ATP-NAD/AcoX kinase%3B K00858 NAD+ kinase gene gene5499 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5440 Amir_5441 Amir_5441 Amir_5441 6459506 6460312 - hemolysin A KEGG: acp:A2cp1_1226 hemolysin A~TIGRFAM: hemolysin A~PFAM: RNA-binding S4 domain protein%3B ribosomal RNA methyltransferase RrmJ/FtsJ~SMART: RNA-binding S4 domain protein gene gene5500 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5441 Amir_5442 Amir_5442 Amir_5442 6460319 6460492 - hypothetical protein gene gene5501 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5442 Amir_5443 Amir_5443 Amir_5443 6460489 6461283 - HAD-superfamily hydrolase%2C subfamily IIA TIGRFAM: HAD-superfamily hydrolase%2C subfamily IIA~PFAM: Haloacid dehalogenase domain protein hydrolase~KEGG: bat:BAS4827 phosphatase gene gene5502 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5443 Amir_5444 Amir_5444 Amir_5444 6461835 6464591 - hypothetical protein KEGG: dvu:DVU0907 hypothetical protein gene gene5503 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5444 Amir_5445 Amir_5445 Amir_5445 6470460 6471743 - tyrosyl-tRNA synthetase KEGG: bsu:BSU29670 tyrosyl-tRNA synthetase~TIGRFAM: tyrosyl-tRNA synthetase~PFAM: aminoacyl-tRNA synthetase class Ib gene gene5508 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5445 Amir_5446 Amir_5446 Amir_5446 6471778 6473502 - hypothetical protein gene gene5509 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5446 Amir_5447 Amir_5447 Amir_5447 6473611 6474132 + putative signal transduction protein with EFhand domain PFAM: Calcium-binding EF-hand-containing protein~SMART: Calcium-binding EF-hand-containing protein~KEGG: Scp2%3B Sarcoplasmic calcium-binding protein 2 gene gene5510 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5447 Amir_5448 Amir_5448 Amir_5448 6474160 6474789 - DNA-3-methyladenine glycosylase TIGRFAM: DNA-3-methyladenine glycosylase~PFAM: methylpurine-DNA glycosylase (MPG)~KEGG: bmu:Bmul_0540 3-methyladenine DNA glycosylase gene gene5511 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5448 Amir_5449 Amir_5449 Amir_5449 6474773 6476164 - argininosuccinate lyase TIGRFAM: argininosuccinate lyase~PFAM: fumarate lyase~KEGG: bac:BamMC406_6164 argininosuccinate lyase gene gene5512 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5449 Amir_5450 Amir_5450 Amir_5450 6476259 6477206 - Argininosuccinate synthase PFAM: argininosuccinate synthase~KEGG: bha:BH3187 argininosuccinate synthase gene gene5513 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5450 Amir_5451 Amir_5451 Amir_5451 6477709 6478203 - arginine repressor%2C ArgR TIGRFAM: arginine repressor~PFAM: arginine repressor~KEGG: afw:Anae109_0631 arginine repressor%2C ArgR gene gene5514 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5451 Amir_5452 Amir_5452 Amir_5452 6478200 6479132 - ornithine carbamoyltransferase TIGRFAM: ornithine carbamoyltransferase~PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region%3B aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain~KEGG: afr:AFE_0405 ornithine carbamoyltransferase gene gene5515 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5452 Amir_5453 Amir_5453 Amir_5453 6479138 6480301 - acetylornithine and succinylornithine aminotransferase TIGRFAM: acetylornithine and succinylornithine aminotransferase~PFAM: aminotransferase class-III~KEGG: acp:A2cp1_2878 acetylornithine and succinylornithine aminotransferase gene gene5516 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5453 Amir_5454 Amir_5454 Amir_5454 6480298 6481200 - acetylglutamate kinase TIGRFAM: acetylglutamate kinase~PFAM: aspartate/glutamate/uridylate kinase~KEGG: glo:Glov_3152 acetylglutamate kinase gene gene5517 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5454 Amir_5455 Amir_5455 Amir_5455 6481197 6482369 - arginine biosynthesis bifunctional protein ArgJ KEGG: gsu:GSU2049 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein~TIGRFAM: arginine biosynthesis bifunctional protein ArgJ~PFAM: arginine biosynthesis protein ArgJ gene gene5518 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5455 Amir_5456 Amir_5456 Amir_5456 6482366 6483388 - N-acetyl-gamma-glutamyl-phosphate reductase KEGG: hch:HCH_06245 N-acetyl-gamma-glutamyl- phosphate reductase~TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase~PFAM: Semialdehyde dehydrogenase dimerization region%3B Semialdehyde dehydrogenase NAD - binding gene gene5519 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5456 Amir_5457 Amir_5457 Amir_5457 6483447 6484394 - Alcohol dehydrogenase zinc-binding domain protein PFAM: Alcohol dehydrogenase zinc-binding domain protein%3B Alcohol dehydrogenase GroES domain protein~KEGG: scl:sce1535 alcohol dehydrogenase gene gene5520 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5457 Amir_5458 Amir_5458 Amir_5458 6484557 6484733 + pseudogene gene5521 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5458 Amir_5459 Amir_5459 Amir_5459 6484733 6485830 + transposase IS4 family protein PFAM: transposase IS4 family protein~KEGG: sbc:SbBS512_A0291 transposase (IS4 family) gene gene5522 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5459 Amir_5460 Amir_5460 Amir_5460 6486006 6486245 - transcriptional regulator%2C XRE family PFAM: helix-turn-helix domain protein~SMART: helix-turn-helix domain protein~KEGG: mmr:Mmar10_0512 XRE family transcriptional regulator gene gene5523 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5460 Amir_5461 Amir_5461 Amir_5461 6486239 6486682 - conserved hypothetical protein KEGG: cak:Caul_3518 hypothetical protein gene gene5524 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5461 Amir_5462 Amir_5462 Amir_5462 6486787 6488202 - pyridine nucleotide-disulphide oxidoreductase dimerization region PFAM: pyridine nucleotide-disulphide oxidoreductase dimerization region%3B FAD-dependent pyridine nucleotide- disulphide oxidoreductase~KEGG: aba:Acid345_3223 soluble pyridine nucleotide transhydrogenase gene gene5525 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5462 Amir_5463 Amir_5463 Amir_5463 6488290 6488787 - hypothetical protein gene gene5526 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5463 Amir_5464 Amir_5464 Amir_5464 6489099 6491576 - phenylalanyl-tRNA synthetase%2C beta subunit KEGG: pca:Pcar_1423 phenylalanyl-tRNA synthetase%2C beta subunit~TIGRFAM: phenylalanyl-tRNA synthetase%2C beta subunit gene gene5527 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5464 Amir_5465 Amir_5465 Amir_5465 6491580 6492647 - phenylalanyl-tRNA synthetase%2C alpha subunit TIGRFAM: phenylalanyl-tRNA synthetase%2C alpha subunit~PFAM: phenylalanyl-tRNA synthetase class IIc%3B aminoacyl tRNA synthetase class II domain protein~KEGG: cja:CJA_2526 phenylalanyl-tRNA synthetase%2C alpha subunit gene gene5528 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5465 Amir_5466 Amir_5466 Amir_5466 6492830 6494587 + ATP-binding region ATPase domain protein PFAM: ATP-binding region ATPase domain protein~KEGG: mxa:MXAN_1393 ATPase%2C histidine kinase-%2C DNA gyrase B-%2C and HSP90-like domain protein gene gene5529 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5466 Amir_5467 Amir_5467 Amir_5467 6494601 6497432 + Tetratricopeptide TPR_2 repeat protein PFAM: Tetratricopeptide TPR_2 repeat protein%3B TPR repeat-containing protein%3B Tetratricopeptide TPR_4~SMART: Tetratricopeptide domain protein~KEGG: mxa:MXAN_1392 hypothetical protein gene gene5530 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5467 Amir_5468 Amir_5468 Amir_5468 6497572 6498243 + two component transcriptional regulator%2C winged helix family PFAM: response regulator receiver%3B transcriptional regulator domain protein~SMART: response regulator receiver~KEGG: sus:Acid_5477 two component transcriptional regulator gene gene5531 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5468 Amir_5469 Amir_5469 Amir_5469 6498240 6499610 + histidine kinase PFAM: ATP-binding region ATPase domain protein%3B histidine kinase HAMP region domain protein%3B histidine kinase A domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B histidine kinase HAMP region domain protein~KEGG: psa:PST_4043 sensor histidine kinase TctE%2C putative gene gene5532 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5469 Amir_5470 Amir_5470 Amir_5470 6499607 6500455 - tRNA/rRNA methyltransferase (SpoU) PFAM: tRNA/rRNA methyltransferase (SpoU)%3B RNA 2-O ribose methyltransferase substrate binding~KEGG: ret:RHE_CH00393 rRNA methylase gene gene5533 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5470 Amir_5471 Amir_5471 Amir_5471 6500455 6500844 - ribosomal protein L20 TIGRFAM: ribosomal protein L20~PFAM: ribosomal protein L20~KEGG: pfo:Pfl01_1934 50S ribosomal protein L20 gene gene5534 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5471 Amir_5472 Amir_5472 Amir_5472 6500906 6501100 - ribosomal protein L35 TIGRFAM: ribosomal protein L35~PFAM: ribosomal protein L35~KEGG: aba:Acid345_0714 LSU ribosomal protein L35P gene gene5535 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5472 Amir_5473 Amir_5473 Amir_5473 6501185 6501799 - translation initiation factor IF-3 TIGRFAM: translation initiation factor IF-3~PFAM: initiation factor 3~KEGG: ftm:FTM_1017 translation initiation factor IF- 3 gene gene5536 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5473 Amir_5474 Amir_5474 Amir_5474 6502081 6502422 + hypothetical protein gene gene5537 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5474 Amir_5475 Amir_5475 Amir_5475 6502580 6503233 - hypothetical protein gene gene5538 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5475 Amir_5476 Amir_5476 Amir_5476 6503436 6505721 + transcriptional regulator%2C XRE family PFAM: helix-turn-helix domain protein%3B NB-ARC domain protein~SMART: helix-turn-helix domain protein%3B AAA ATPase~KEGG: scl:sce5225 protein kinase gene gene5539 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5476 Amir_5477 Amir_5477 Amir_5477 6505946 6506332 - endoribonuclease L-PSP TIGRFAM: endoribonuclease L-PSP~PFAM: Endoribonuclease L-PSP~KEGG: mmw:Mmwyl1_4387 putative endoribonuclease L- PSP gene gene5540 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5477 Amir_5478 Amir_5478 Amir_5478 6506349 6507098 - transcriptional regulator%2C IclR family PFAM: Transcriptional regulator IclR%3B regulatory protein IclR~SMART: regulatory protein IclR~KEGG: bha:BH2137 IclR family transcriptional regulator gene gene5541 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5478 Amir_5479 Amir_5479 Amir_5479 6507095 6508060 - PfkB domain protein PFAM: PfkB domain protein~KEGG: bha:BH3724 2-keto-3-deoxygluconate kinase gene gene5542 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5479 Amir_5480 Amir_5480 Amir_5480 6508172 6509461 + alanine racemase domain protein PFAM: alanine racemase domain protein~KEGG: lch:Lcho_0086 D-serine deaminase gene gene5543 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5480 Amir_5481 Amir_5481 Amir_5481 6509522 6511111 + N-acyl-D-amino-acid deacylase PFAM: Amidohydrolase 3%3B D-aminoacylase domain protein%3B amidohydrolase~KEGG: hypothetical protein gene gene5544 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5481 Amir_5482 Amir_5482 Amir_5482 6511108 6512502 + gluconate transporter TIGRFAM: gluconate transporter~PFAM: Gluconate transporter%3B Citrate transporter%3B TRAP C4-dicarboxylate transport system permease DctM subunit~KEGG: oan:Oant_4271 gluconate transporter gene gene5545 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5482 Amir_5483 Amir_5483 Amir_5483 6512671 6515535 - excinuclease ABC%2C A subunit TIGRFAM: excinuclease ABC%2C A subunit~PFAM: ABC transporter related~KEGG: bha:BH3594 excinuclease ABC subunit A gene gene5546 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5483 Amir_5484 Amir_5484 Amir_5484 6515834 6516553 + conserved hypothetical protein KEGG: pde:Pden_0168 hypothetical protein gene gene5547 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5484 Amir_5485 Amir_5485 Amir_5485 6516406 6517590 - acyltransferase 3 PFAM: acyltransferase 3~KEGG: maq:Maqu_3475 acyltransferase 3 gene gene5548 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5485 Amir_5486 Amir_5486 Amir_5486 6517722 6518399 + beta-lactamase domain protein PFAM: beta-lactamase domain protein~KEGG: gme:Gmet_2674 beta-lactamase-like gene gene5549 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5486 Amir_5487 Amir_5487 Amir_5487 6519162 6520460 - hypothetical protein gene gene5550 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5487 Amir_5488 Amir_5488 Amir_5488 6521183 6521437 + hypothetical protein gene gene5551 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5488 Amir_5489 Amir_5489 Amir_5489 6522106 6522792 - conserved hypothetical protein KEGG: hypothetical protein LOC762973 gene gene5552 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5489 Amir_5490 Amir_5490 Amir_5490 6522890 6524023 - putative transcriptional regulator%2C GntR family PFAM: aminotransferase class I and II~KEGG: mxa:MXAN_0212 aminotransferase%2C class I and II family protein gene gene5553 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5490 Amir_5491 Amir_5491 Amir_5491 6524354 6524653 + transcriptional regulator%2C ArsR family PFAM: regulatory protein ArsR~SMART: regulatory protein ArsR~KEGG: bpt:Bpet3500 ArsR family transcriptional regulator gene gene5554 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5491 Amir_5492 Amir_5492 Amir_5492 6524650 6525540 + Activator of Hsp90 ATPase 1 family protein PFAM: Activator of Hsp90 ATPase 1 family protein~KEGG: ank:AnaeK_2658 activator of HSP90 ATPase 1 family protein gene gene5555 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5492 Amir_5493 Amir_5493 Amir_5493 6525678 6526652 - hypothetical protein KEGG: hypothetical protein gene gene5556 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5493 Amir_5494 Amir_5494 Amir_5494 6526872 6527306 + transcriptional regulator%2C AraC family PFAM: helix-turn-helix- domain containing protein AraC type~SMART: helix-turn-helix- domain containing protein AraC type~KEGG: cti:RALTA_B0884 putative transcriptional regulator%2C AraC family%2C isolated domain gene gene5557 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5494 Amir_5495 Amir_5495 Amir_5495 6527303 6527713 + Glyoxalase/bleomycin resistance protein/dioxygenase PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase~KEGG: cti:RALTA_B0885 putative lyase gene gene5558 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5495 Amir_5496 Amir_5496 Amir_5496 6527847 6528404 + protein of unknown function DUF309 PFAM: protein of unknown function DUF309~KEGG: dvm:DvMF_2231 protein of unknown function DUF309 gene gene5559 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5496 Amir_5497 Amir_5497 Amir_5497 6528401 6529045 + GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: pla:Plav_0958 GCN5-related N- acetyltransferase gene gene5560 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5497 Amir_5498 Amir_5498 Amir_5498 6529077 6529259 + hypothetical protein gene gene5561 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5498 Amir_5499 Amir_5499 Amir_5499 6529973 6530125 - hypothetical protein gene gene5562 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5499 Amir_5500 Amir_5500 Amir_5500 6530198 6531400 - helix-turn-helix domain protein PFAM: helix-turn-helix domain protein~SMART: helix-turn-helix domain protein~KEGG: acp:A2cp1_3940 TPR repeat-containing protein gene gene5563 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5500 Amir_5501 Amir_5501 Amir_5501 6532862 6533632 + protein of unknown function DUF540 PFAM: protein of unknown function DUF540~KEGG: maq:Maqu_3616 hypothetical protein gene gene5564 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5501 Amir_5502 Amir_5502 Amir_5502 6533778 6534605 - peptidase S1 and S6 chymotrypsin/Hap PFAM: peptidase S1 and S6 chymotrypsin/Hap~SMART: peptidase S1 and S6 chymotrypsin/Hap~KEGG: AGAP008296-PA gene gene5565 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5502 Amir_5503 Amir_5503 Amir_5503 6534783 6535157 + peptidylprolyl isomerase FKBP-type PFAM: peptidylprolyl isomerase FKBP-type~KEGG: tbd:Tbd_2152 peptidyl-prolyl cis-trans isomerase gene gene5566 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5503 Amir_5504 Amir_5504 Amir_5504 6535463 6536029 + hypothetical protein KEGG: hypothetical protein gene gene5567 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5504 Amir_5505 Amir_5505 Amir_5505 6536137 6537210 + hypothetical protein KEGG: predicted gene%2C EG114600 gene gene5568 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5505 Amir_5506 Amir_5506 Amir_5506 6537318 6538505 - hypothetical protein KEGG: hne:HNE_2077 hypothetical protein gene gene5569 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5506 Amir_5507 Amir_5507 Amir_5507 6538702 6539286 + conserved hypothetical protein KEGG: pla:Plav_3469 hypothetical protein gene gene5570 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5507 Amir_5508 Amir_5508 Amir_5508 6540197 6540853 + RES domain protein PFAM: RES domain protein~KEGG: rsh:Rsph17029_3025 hypothetical protein gene gene5571 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5508 Amir_5509 Amir_5509 Amir_5509 6541042 6541629 - GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: scl:sce8211 adenylattransferase gene gene5572 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5509 Amir_5510 Amir_5510 Amir_5510 6541663 6542280 - hypothetical protein gene gene5573 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5510 Amir_5511 Amir_5511 Amir_5511 6542277 6542960 - transcriptional regulator%2C Crp/Fnr family PFAM: cyclic nucleotide-binding~SMART: cyclic nucleotide-binding~KEGG: dal:Dalk_5197 transcriptional regulator%2C Crp/Fnr family gene gene5574 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5511 Amir_5512 Amir_5512 Amir_5512 6543220 6545124 - peptidase S9 prolyl oligopeptidase active site domain protein PFAM: peptidase S9 prolyl oligopeptidase active site domain protein%3B dienelactone hydrolase%3B WD40 domain protein beta Propeller%3B Acetyl xylan esterase~KEGG: bsu:BSU32230 hypothetical protein gene gene5575 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5512 Amir_5513 Amir_5513 Amir_5513 6545189 6546181 - Integral membrane protein TerC PFAM: Integral membrane protein TerC~KEGG: csa:Csal_1104 integral membrane protein TerC gene gene5576 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5513 Amir_5514 Amir_5514 Amir_5514 6546560 6549466 + ABC transporter related PFAM: ABC transporter related%3B peptidase S15%3B alpha/beta hydrolase fold~SMART: AAA ATPase~KEGG: bcz:BCZK3372 bacitracin ABC transporter%2C ATP- binding protein gene gene5577 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5514 Amir_5515 Amir_5515 Amir_5515 6549463 6550446 + hypothetical protein KEGG: rso:RSp1372 NosY transmembrane protein gene gene5578 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5515 Amir_5516 Amir_5516 Amir_5516 6550512 6552683 - excinuclease ABC%2C B subunit KEGG: bcy:Bcer98_3710 excinuclease ABC subunit B~TIGRFAM: excinuclease ABC%2C B subunit~PFAM: helicase domain protein%3B UvrB/UvrC protein~SMART: DEAD-like helicase%3B helicase domain protein gene gene5579 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5516 Amir_5517 Amir_5517 Amir_5517 6552768 6554081 - hypothetical protein KEGG: hypothetical protein gene gene5580 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5517 Amir_5518 Amir_5518 Amir_5518 6554188 6554733 + conserved hypothetical protein gene gene5581 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5518 Amir_5519 Amir_5519 Amir_5519 6554881 6555402 + conserved hypothetical protein gene gene5582 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5519 Amir_5520 Amir_5520 Amir_5520 6555372 6556556 - dephospho-CoA kinase KEGG: scl:sce3709 hypothetical protein~TIGRFAM: dephospho-CoA kinase~PFAM: Dephospho-CoA kinase%3B protein of unknown function UPF0157 gene gene5583 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5520 Amir_5521 Amir_5521 Amir_5521 6556597 6557217 - hypothetical protein gene gene5584 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5521 Amir_5522 Amir_5522 Amir_5522 6557513 6559000 - RNA binding S1 domain protein PFAM: RNA binding S1 domain protein~SMART: RNA binding S1 domain protein~KEGG: dal:Dalk_0933 ribosomal protein S1 gene gene5585 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5522 Amir_5523 Amir_5523 Amir_5523 6559192 6560022 + Methyltransferase type 11 PFAM: Methyltransferase type 11%3B Methyltransferase type 12~KEGG: ank:AnaeK_1219 methyltransferase type 11 gene gene5586 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5523 Amir_5524 Amir_5524 Amir_5524 6560033 6560959 + GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: sil:SPO0965 acetyltransferase gene gene5587 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5524 Amir_5525 Amir_5525 Amir_5525 6561709 6562344 + hypothetical protein KEGG: hypothetical protein gene gene5588 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5525 Amir_5526 Amir_5526 Amir_5526 6562341 6564236 + YhgE/Pip C-terminal domain protein TIGRFAM: YhgE/Pip C-terminal domain protein%3B YhgE/Pip N-terminal domain protein~PFAM: ABC-2 type transporter~KEGG: bce:BC5221 phage infection protein gene gene5589 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5526 Amir_5527 Amir_5527 Amir_5527 6564233 6564844 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: scl:sce9124 TetR family transcriptional regulator gene gene5590 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5527 Amir_5528 Amir_5528 Amir_5528 6564890 6565510 - hypothetical protein KEGG: bcz:BCZK1848 short chain dehydrogenase gene gene5591 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5528 Amir_5529 Amir_5529 Amir_5529 6565585 6566193 - conserved hypothetical protein KEGG: cvi:CV_0278 hypothetical protein gene gene5592 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5529 Amir_5530 Amir_5530 Amir_5530 6566485 6567720 - oxidoreductase domain protein PFAM: oxidoreductase domain protein%3B Oxidoreductase domain~KEGG: NAD binding Rossmann fold oxidoreductase%3B K00540 gene gene5593 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5530 Amir_5531 Amir_5531 Amir_5531 6567754 6567945 - conserved hypothetical protein KEGG: bur:Bcep18194_B0875 hypothetical protein gene gene5594 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5531 Amir_5532 Amir_5532 Amir_5532 6568951 6571617 - DNA polymerase I KEGG: afw:Anae109_2455 DNA polymerase I~TIGRFAM: DNA polymerase I~PFAM: DNA-directed DNA polymerase%3B 5'-3' exonuclease~SMART: 5'-3' exonuclease%3B DNA-directed DNA polymerase%3B 3'-5' exonuclease%3B Helix-hairpin-helix domain protein class 2 gene gene5595 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5532 Amir_5533 Amir_5533 Amir_5533 6571672 6572082 + thioesterase superfamily protein PFAM: thioesterase superfamily protein~KEGG: eum:ECUMN_0691 putative esterase gene gene5596 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5533 Amir_5534 Amir_5534 Amir_5534 6572087 6572605 + hypothetical protein KEGG: bcr:BCAH187_A1173 hypothetical protein gene gene5597 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5534 Amir_5535 Amir_5535 Amir_5535 6572684 6573388 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: gbm:Gbem_1946 ABC transporter related protein gene gene5598 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5535 Amir_5536 Amir_5536 Amir_5536 6573378 6574154 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: bmj:BMULJ_02460 branched-chain amino acid transport system ATP-binding protein gene gene5599 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5536 Amir_5537 Amir_5537 Amir_5537 6574151 6575308 - inner-membrane translocator PFAM: inner-membrane translocator~KEGG: bbr:BB2027 putative ABC transport protein%2C ATP-binding component gene gene5600 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5537 Amir_5538 Amir_5538 Amir_5538 6575305 6576267 - inner-membrane translocator PFAM: inner-membrane translocator~KEGG: cvi:CV_1503 leucine/isoleucine/valine transport system permease protein gene gene5601 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5538 Amir_5539 Amir_5539 Amir_5539 6576393 6577571 - Extracellular ligand-binding receptor PFAM: Extracellular ligand-binding receptor~KEGG: azo:azo3730 leucine-specific binding protein gene gene5602 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5539 Amir_5540 Amir_5540 Amir_5540 6577885 6578487 - response regulator receiver and ANTAR domain protein PFAM: response regulator receiver%3B ANTAR domain protein~SMART: response regulator receiver~KEGG: gme:Gmet_0660 response regulator receiver/ANTAR domain-containing protein gene gene5603 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5540 Amir_5541 Amir_5541 Amir_5541 6579184 6580137 - hypothetical protein gene gene5604 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5541 Amir_5542 Amir_5542 Amir_5542 6580562 6581077 + protein of unknown function DUF664 PFAM: protein of unknown function DUF664 gene gene5605 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5542 Amir_5543 Amir_5543 Amir_5543 6581555 6582871 - hypothetical protein KEGG: hypothetical protein gene gene5606 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5543 Amir_5544 Amir_5544 Amir_5544 6582967 6583431 + CoA-binding domain protein PFAM: CoA-binding domain protein~KEGG: mag:amb2851 hypothetical protein gene gene5607 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5544 Amir_5545 Amir_5545 Amir_5545 6583409 6583789 - Endoribonuclease L-PSP PFAM: Endoribonuclease L-PSP~KEGG: nmu:Nmul_A2263 endoribonuclease L-PSP gene gene5608 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5545 Amir_5546 Amir_5546 Amir_5546 6583847 6584641 + alpha/beta hydrolase fold protein PFAM: alpha/beta hydrolase fold~KEGG: xau:Xaut_2294 alpha/beta hydrolase fold gene gene5609 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5546 Amir_5547 Amir_5547 Amir_5547 6585183 6587426 + putative signal transduction protein with Nacht domain KEGG: disease resistance-responsive family protein / fibroin-related gene gene5610 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5547 Amir_5548 Amir_5548 Amir_5548 6587522 6588352 - pentapeptide repeat protein PFAM: pentapeptide repeat protein~KEGG: bat:BAS3175 pentapeptide repeat-containing protein gene gene5611 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5548 Amir_5549 Amir_5549 Amir_5549 6588700 6590520 - ATP-dependent DNA helicase RecQ KEGG: bpt:Bpet0900 DNA helicase~TIGRFAM: ATP-dependent DNA helicase RecQ%3B ATP- dependent DNA helicase%2C RecQ family~PFAM: DEAD/DEAH box helicase domain protein%3B HRDC domain protein%3B helicase domain protein~SMART: DEAD-like helicase%3B helicase domain protein%3B HRDC domain protein gene gene5612 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5549 Amir_5550 Amir_5550 Amir_5550 6590530 6591894 - hypothetical protein KEGG: bat:BAS3517 hypothetical protein gene gene5613 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5550 Amir_5551 Amir_5551 Amir_5551 6591979 6592734 + restriction endonuclease-like protein KEGG: hypothetical protein gene gene5614 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5551 Amir_5552 Amir_5552 Amir_5552 6592742 6593104 - hypothetical protein gene gene5615 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5552 Amir_5553 Amir_5553 Amir_5553 6593140 6594543 + hypothetical protein KEGG: ade:Adeh_0244 LigA gene gene5616 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5553 Amir_5554 Amir_5554 Amir_5554 6594572 6594829 + hypothetical protein gene gene5617 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5554 Amir_5555 Amir_5555 Amir_5555 6594888 6595355 - transcriptional regulator%2C XRE family PFAM: helix-turn-helix domain protein~SMART: helix-turn-helix domain protein gene gene5618 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5555 Amir_5556 Amir_5556 Amir_5556 6595479 6595742 + transcriptional regulator%2C XRE family KEGG: cja:CJA_3805 helix-turn-helix domain protein gene gene5619 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5556 Amir_5557 Amir_5557 Amir_5557 6595742 6596194 + hypothetical protein gene gene5620 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5557 Amir_5558 Amir_5558 Amir_5558 6596267 6597244 + hypothetical protein gene gene5621 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5558 Amir_5559 Amir_5559 Amir_5559 6597241 6598422 + hypothetical protein gene gene5622 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5559 Amir_5560 Amir_5560 Amir_5560 6598616 6599356 + hypothetical protein gene gene5623 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5560 Amir_5561 Amir_5561 Amir_5561 6599353 6599703 + hypothetical protein gene gene5624 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5561 Amir_5562 Amir_5562 Amir_5562 6599775 6600209 + HNH endonuclease PFAM: HNH endonuclease~KEGG: sus:Acid_3418 HNH endonuclease gene gene5625 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5562 Amir_5563 Amir_5563 Amir_5563 6600206 6600715 + hypothetical protein gene gene5626 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5563 Amir_5564 Amir_5564 Amir_5564 6600746 6601606 + hypothetical protein KEGG: similar to homologue to Drosophila photoreceptor protein calphotin gene gene5627 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5564 Amir_5565 Amir_5565 Amir_5565 6601603 6601881 + hypothetical protein gene gene5628 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5565 Amir_5566 Amir_5566 Amir_5566 6602048 6602350 + hypothetical protein gene gene5629 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5566 Amir_5567 Amir_5567 Amir_5567 6602468 6602929 + hypothetical protein gene gene5630 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5567 Amir_5568 Amir_5568 Amir_5568 6603093 6603497 + hypothetical protein gene gene5631 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5568 Amir_5569 Amir_5569 Amir_5569 6603494 6604198 + hypothetical protein gene gene5632 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5569 Amir_5570 Amir_5570 Amir_5570 6604654 6604848 + hypothetical protein gene gene5633 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5570 Amir_5571 Amir_5571 Amir_5571 6604845 6605237 + hypothetical protein gene gene5634 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5571 Amir_5572 Amir_5572 Amir_5572 6605247 6606314 + hypothetical protein KEGG: ppg:PputGB1_3430 hypothetical protein gene gene5635 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5572 Amir_5573 Amir_5573 Amir_5573 6606318 6606803 + metallophosphoesterase KEGG: aba:Acid345_1977 metallophosphoesterase gene gene5636 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5573 Amir_5574 Amir_5574 Amir_5574 6606806 6608296 + C-5 cytosine-specific DNA methylase PFAM: C-5 cytosine-specific DNA methylase~KEGG: vei:Veis_3654 C-5 cytosine-specific DNA methylase gene gene5637 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5574 Amir_5575 Amir_5575 Amir_5575 6608323 6609000 + hypothetical protein KEGG: mxa:MXAN_2991 adventurous gliding motility protein AglZ gene gene5638 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5575 Amir_5576 Amir_5576 Amir_5576 6609004 6609198 + hypothetical protein gene gene5639 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5576 Amir_5577 Amir_5577 Amir_5577 6609275 6609589 + transcription factor WhiB PFAM: transcription factor WhiB gene gene5640 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5577 Amir_5578 Amir_5578 Amir_5578 6609589 6610083 + hypothetical protein KEGG: hypothetical protein gene gene5641 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5578 Amir_5579 Amir_5579 Amir_5579 6610080 6610670 + hypothetical protein gene gene5642 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5579 Amir_5580 Amir_5580 Amir_5580 6610667 6610762 + hypothetical protein gene gene5643 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5580 Amir_5581 Amir_5581 Amir_5581 6610772 6610969 + hypothetical protein gene gene5644 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5581 Amir_5582 Amir_5582 Amir_5582 6611025 6611285 + hypothetical protein gene gene5645 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5582 Amir_5583 Amir_5583 Amir_5583 6611322 6612224 + hypothetical protein KEGG: pzu:PHZ_c2649 5-methyltetrahydrofolate-- homocysteine methyltransferase gene gene5646 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5583 Amir_5584 Amir_5584 Amir_5584 6612239 6612607 + hypothetical protein gene gene5647 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5584 Amir_5585 Amir_5585 Amir_5585 6612878 6613822 + SMF family protein PFAM: SMF family protein~KEGG: gme:Gmet_0890 smf protein gene gene5648 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5585 Amir_5586 Amir_5586 Amir_5586 6613839 6614582 + phosphoribosyltransferase KEGG: dol:Dole_1907 phosphoribosyltransferase gene gene5649 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5586 Amir_5587 Amir_5587 Amir_5587 6614684 6614878 - hypothetical protein gene gene5650 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5587 Amir_5588 Amir_5588 Amir_5588 6614878 6615633 - hypothetical protein KEGG: GK12364 gene product from transcript GK12364- RA gene gene5651 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5588 Amir_5589 Amir_5589 Amir_5589 6615739 6615951 - hypothetical protein gene gene5652 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5589 Amir_5590 Amir_5590 Amir_5590 6615997 6616725 - membrane-bound metal-dependent hydrolase PFAM: membrane-bound metal-dependent hydrolase~KEGG: gbe:GbCGDNIH1_1245 predicted membrane-bound metal-dependent hydrolase gene gene5653 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5590 Amir_5591 Amir_5591 Amir_5591 6616857 6617591 - hypothetical protein KEGG: fibrocystin-L-like protein gene gene5654 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5591 Amir_5592 Amir_5592 Amir_5592 6617855 6620113 - hypothetical protein KEGG: ade:Adeh_4037 MaoC-like dehydratase gene gene5655 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5592 Amir_5593 Amir_5593 Amir_5593 6620176 6621246 - hypothetical protein KEGG: PF6%3B flagellar central pair-associated protein gene gene5656 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5593 Amir_5594 Amir_5594 Amir_5594 6621246 6621689 - hypothetical protein gene gene5657 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5594 Amir_5595 Amir_5595 Amir_5595 6621701 6623071 - hypothetical protein KEGG: pin:Ping_0445 colicin uptake-like protein gene gene5658 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5595 Amir_5596 Amir_5596 Amir_5596 6623132 6623800 - hypothetical protein gene gene5659 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5596 Amir_5597 Amir_5597 Amir_5597 6623869 6624387 - hypothetical protein KEGG: scl:sce8592 hypothetical protein gene gene5660 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5597 Amir_5598 Amir_5598 Amir_5598 6624384 6624881 - NUDIX hydrolase PFAM: NUDIX hydrolase~KEGG: scl:sce2352 hypothetical protein gene gene5661 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5598 Amir_5599 Amir_5599 Amir_5599 6624973 6625239 - hypothetical protein gene gene5662 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5599 Amir_5600 Amir_5600 Amir_5600 6625315 6625578 - pseudogene gene5663 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5600 Amir_5601 Amir_5601 Amir_5601 6625601 6625786 - pseudogene gene5664 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5601 Amir_5602 Amir_5602 Amir_5602 6625791 6626732 - hypothetical protein gene gene5665 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5602 Amir_5603 Amir_5603 Amir_5603 6626809 6626967 - hypothetical protein gene gene5666 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5603 Amir_5604 Amir_5604 Amir_5604 6627012 6627218 - hypothetical protein gene gene5667 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5604 Amir_5605 Amir_5605 Amir_5605 6627335 6628135 + transcriptional regulator%2C GntR family PFAM: UbiC transcription regulator-associated domain protein%3B regulatory protein GntR HTH~SMART: regulatory protein GntR HTH~KEGG: sil:SPO0467 GntR family transcriptional regulator gene gene5668 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5605 Amir_5606 Amir_5606 Amir_5606 6628276 6628458 + hypothetical protein gene gene5669 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5606 Amir_5607 Amir_5607 Amir_5607 6628549 6629106 + hypothetical protein gene gene5670 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5607 Amir_5608 Amir_5608 Amir_5608 6629103 6629558 + hypothetical protein gene gene5671 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5608 Amir_5609 Amir_5609 Amir_5609 6629882 6630007 + hypothetical protein gene gene5672 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5609 Amir_5610 Amir_5610 Amir_5610 6630039 6630329 + hypothetical protein gene gene5673 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5610 Amir_5611 Amir_5611 Amir_5611 6630791 6632560 + lipolytic protein G-D-S-L family PFAM: lipolytic protein G-D-S-L family~KEGG: met:M446_3487 triple helix repeat-containing COllagen gene gene5674 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5611 Amir_5612 Amir_5612 Amir_5612 6632577 6632963 + phage protein KEGG: bav:BAV1457 phage protein gene gene5675 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5612 Amir_5613 Amir_5613 Amir_5613 6632974 6633249 + hypothetical protein gene gene5676 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5613 Amir_5614 Amir_5614 Amir_5614 6633246 6633665 + hypothetical protein gene gene5677 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5614 Amir_5615 Amir_5615 Amir_5615 6633662 6634258 + hypothetical protein KEGG: nwi:Nwi_1556 hypothetical protein gene gene5678 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5615 Amir_5616 Amir_5616 Amir_5616 6634262 6634528 + hypothetical protein gene gene5679 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5616 Amir_5617 Amir_5617 Amir_5617 6634515 6634727 + hypothetical protein gene gene5680 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5617 Amir_5618 Amir_5618 Amir_5618 6634986 6635186 + hypothetical protein gene gene5681 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5618 Amir_5619 Amir_5619 Amir_5619 6635186 6635635 + hypothetical protein gene gene5682 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5619 Amir_5620 Amir_5620 Amir_5620 6635632 6637245 + Terminase PFAM: Terminase~KEGG: acp:A2cp1_1302 terminase gene gene5683 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5620 Amir_5621 Amir_5621 Amir_5621 6637256 6638680 + protein of unknown function DUF1483 PFAM: protein of unknown function DUF1483 gene gene5684 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5621 Amir_5622 Amir_5622 Amir_5622 6638677 6639720 + hypothetical protein gene gene5685 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5622 Amir_5623 Amir_5623 Amir_5623 6639767 6640432 + hypothetical protein KEGG: dal:Dalk_5199 hypothetical protein gene gene5686 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5623 Amir_5624 Amir_5624 Amir_5624 6640429 6640620 + hypothetical protein gene gene5687 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5624 Amir_5625 Amir_5625 Amir_5625 6640620 6641975 + conserved hypothetical protein KEGG: acr:Acry_2510 hypothetical protein gene gene5688 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5625 Amir_5626 Amir_5626 Amir_5626 6641975 6642439 + hypothetical protein KEGG: bpa:BPP1618 autotransporter gene gene5689 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5626 Amir_5627 Amir_5627 Amir_5627 6642450 6643067 + hypothetical protein gene gene5690 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5627 Amir_5628 Amir_5628 Amir_5628 6643199 6643567 + hypothetical protein gene gene5691 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5628 Amir_5629 Amir_5629 Amir_5629 6643577 6643900 + hypothetical protein gene gene5692 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5629 Amir_5630 Amir_5630 Amir_5630 6643903 6644205 + hypothetical protein gene gene5693 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5630 Amir_5631 Amir_5631 Amir_5631 6644215 6644649 + hypothetical protein gene gene5694 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5631 Amir_5632 Amir_5632 Amir_5632 6644788 6645339 + hypothetical protein gene gene5695 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5632 Amir_5633 Amir_5633 Amir_5633 6645354 6645725 + hypothetical protein gene gene5696 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5633 Amir_5634 Amir_5634 Amir_5634 6645812 6646225 + hypothetical protein gene gene5697 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5634 Amir_5635 Amir_5635 Amir_5635 6646242 6650357 + phage tail tape measure protein%2C TP901 family TIGRFAM: phage tail tape measure protein%2C TP901 family~KEGG: mgm:Mmc1_2034 phage tail tape measure protein%2C TP901 family gene gene5698 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5635 Amir_5636 Amir_5636 Amir_5636 6650368 6651813 + hypothetical protein KEGG: similar to endo-1%2C4-beta-glucanase gene gene5699 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5636 Amir_5637 Amir_5637 Amir_5637 6651863 6652993 + hypothetical protein KEGG: mag:amb1782 PRY3 protein gene gene5700 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5637 Amir_5638 Amir_5638 Amir_5638 6652990 6654129 + hypothetical protein gene gene5701 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5638 Amir_5639 Amir_5639 Amir_5639 6654129 6654839 + hypothetical protein gene gene5702 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5639 Amir_5640 Amir_5640 Amir_5640 6654840 6655265 - conserved hypothetical protein KEGG: hypothetical protein gene gene5703 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5640 Amir_5641 Amir_5641 Amir_5641 6655352 6655609 + hypothetical protein gene gene5704 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5641 Amir_5642 Amir_5642 Amir_5642 6655606 6655986 + hypothetical protein gene gene5705 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5642 Amir_5643 Amir_5643 Amir_5643 6655983 6656990 + glycoside hydrolase family 25 PFAM: glycoside hydrolase family 25~SMART: glycoside hydrolase family 25~KEGG: sil:SPO3258 glycosy hydrolase family protein gene gene5706 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5643 Amir_5644 Amir_5644 Amir_5644 6656987 6658045 + hypothetical protein gene gene5707 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5644 Amir_5645 Amir_5645 Amir_5645 6658058 6658450 + pseudogene gene5708 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5645 Amir_5646 Amir_5646 Amir_5646 6658454 6658687 + conserved hypothetical protein KEGG: psb:Psyr_2800 hypothetical protein gene gene5709 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5646 Amir_5647 Amir_5647 Amir_5647 6658747 6659979 - integrase family protein PFAM: integrase family protein~KEGG: bce:BC1272 DNA integration/recombination/invertion protein gene gene5710 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5647 Amir_5648 Amir_5648 Amir_5648 6660208 6660489 - protein of unknown function DUF156 PFAM: protein of unknown function DUF156~KEGG: acp:A2cp1_3648 protein of unknown function DUF156 gene gene5712 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5648 Amir_5649 Amir_5649 Amir_5649 6660753 6661094 + hypothetical protein gene gene5713 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5649 Amir_5650 Amir_5650 Amir_5650 6661156 6663174 - para-aminobenzoate synthase%2C subunit I TIGRFAM: para-aminobenzoate synthase%2C subunit I%3B glutamine amidotransferase of anthranilate synthase~PFAM: Chorismate binding-like%3B glutamine amidotransferase class-I%3B Anthranilate synthase component I domain protein~KEGG: rpd:RPD_2897 para-aminobenzoate synthase%2C component I gene gene5714 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5650 Amir_5651 Amir_5651 Amir_5651 6663234 6663959 - hypothetical protein gene gene5715 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5651 Amir_5652 Amir_5652 Amir_5652 6663953 6664453 - RNA polymerase%2C sigma-24 subunit%2C ECF subfamily TIGRFAM: RNA polymerase sigma-70 factor%2C sigma-E family%3B RNA polymerase sigma factor%2C sigma-70 family~PFAM: Sigma-70 region 4 type 2%3B sigma-70 region 2 domain protein%3B sigma-70 region 4 domain protein~KEGG: pca:Pcar_3124 RNA polymerase%2C sigma-E factor gene gene5716 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5652 Amir_5653 Amir_5653 Amir_5653 6664572 6665831 + metallophosphoesterase PFAM: metallophosphoesterase~KEGG: scl:sce7577 putative integral membrane protein gene gene5717 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5653 Amir_5654 Amir_5654 Amir_5654 6665882 6667075 + Orn/DAP/Arg decarboxylase 2 PFAM: Orn/DAP/Arg decarboxylase 2%3B alanine racemase domain protein~KEGG: mag:amb1388 diaminopimelate decarboxylase gene gene5718 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5654 Amir_5655 Amir_5655 Amir_5655 6667146 6667559 + S-adenosylmethionine decarboxylase proenzyme TIGRFAM: S-adenosylmethionine decarboxylase proenzyme~PFAM: S-adenosylmethionine decarboxylase related~KEGG: bcr:BCAH187_A5378 adenosylmethionine decarboxylase 2 gene gene5719 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5655 Amir_5656 Amir_5656 Amir_5656 6667556 6668401 + Spermine synthase PFAM: Spermine synthase~KEGG: jan:Jann_0855 spermidine synthase gene gene5720 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5656 Amir_5657 Amir_5657 Amir_5657 6668504 6670585 - peptidase S9 prolyl oligopeptidase active site domain protein PFAM: peptidase S9 prolyl oligopeptidase active site domain protein%3B peptidase S9B dipeptidylpeptidase IV domain protein~KEGG: afw:Anae109_2431 peptidase S9B dipeptidylpeptidase IV subunit gene gene5721 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5657 Amir_5658 Amir_5658 Amir_5658 6670710 6671315 - nitroreductase PFAM: nitroreductase~KEGG: lch:Lcho_1290 nitroreductase gene gene5722 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5658 Amir_5659 Amir_5659 Amir_5659 6671480 6672745 - Glycine hydroxymethyltransferase PFAM: glycine hydroxymethyltransferase%3B aminotransferase class I and II%3B aromatic amino acid beta- eliminating lyase/threonine aldolase~KEGG: rce:RC1_1342 serine hydroxymethyltransferase gene gene5723 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5659 Amir_5660 Amir_5660 Amir_5660 6672763 6673860 - glycine cleavage system T protein TIGRFAM: glycine cleavage system T protein~PFAM: glycine cleavage T protein (aminomethyl transferase)%3B Glycine cleavage T-protein barrel%3B Sarcosine oxidase gamma subunit~KEGG: afw:Anae109_2522 glycine cleavage system aminomethyltransferase T gene gene5724 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5660 Amir_5661 Amir_5661 Amir_5661 6674048 6674350 - conserved hypothetical protein KEGG: bba:Bd3290 hypothetical protein gene gene5725 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5661 Amir_5662 Amir_5662 Amir_5662 6674374 6674844 - Glucitol operon activator-like protein gene gene5726 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5662 Amir_5663 Amir_5663 Amir_5663 6675471 6675962 - hypothetical protein gene gene5727 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5663 Amir_5664 Amir_5664 Amir_5664 6676142 6676288 - hypothetical protein gene gene5728 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5664 Amir_5665 Amir_5665 Amir_5665 6677645 6678766 - L-carnitine dehydratase/bile acid-inducible protein F PFAM: L-carnitine dehydratase/bile acid-inducible protein F~KEGG: rfr:Rfer_0993 L-carnitine dehydratase/bile acid-inducible protein F gene gene5729 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5665 Amir_5666 Amir_5666 Amir_5666 6678766 6679911 - acyl-CoA dehydrogenase domain protein PFAM: acyl-CoA dehydrogenase domain protein%3B Acyl- CoA dehydrogenase type 2 domain~KEGG: rce:RC1_0378 acyl-CoA dehydrogenase gene gene5730 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5666 Amir_5667 Amir_5667 Amir_5667 6679981 6680553 + GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: swp:swp_4165 GCN5-like N-acetyltransferase gene gene5731 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5667 Amir_5668 Amir_5668 Amir_5668 6680614 6681816 + acetyl-CoA acetyltransferase TIGRFAM: acetyl-CoA acetyltransferase~PFAM: Thiolase%3B 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein~KEGG: pag:PLES_35931 putative acyl-CoA thiolase gene gene5732 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5668 Amir_5669 Amir_5669 Amir_5669 6681818 6683872 + 3-hydroxyacyl-CoA dehydrogenase NAD-binding PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding%3B Enoyl-CoA hydratase/isomerase%3B 3-hydroxyacyl-CoA dehydrogenase domain protein~KEGG: pmy:Pmen_2590 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase gene gene5733 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5669 Amir_5670 Amir_5670 Amir_5670 6683863 6684870 - transcriptional regulator%2C AraC family PFAM: helix-turn-helix- domain containing protein AraC type~SMART: helix-turn-helix- domain containing protein AraC type~KEGG: pmy:Pmen_2972 AraC family transcriptional regulator gene gene5734 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5670 Amir_5671 Amir_5671 Amir_5671 6685400 6685795 + hypothetical protein KEGG: hypothetical protein gene gene5735 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5671 Amir_5672 Amir_5672 Amir_5672 6686089 6687207 + GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase%3B amino acid- binding ACT domain protein~KEGG: mch:Mchl_1293 GCN5-related N- acetyltransferase gene gene5736 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5672 Amir_5673 Amir_5673 Amir_5673 6687607 6688638 + transcriptional regulator%2C LacI family KEGG: vvy:VVA0123 transcriptional regulator~PFAM: regulatory protein LacI%3B periplasmic binding protein/LacI transcriptional regulator~SMART: regulatory protein LacI gene gene5737 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5673 Amir_5674 Amir_5674 Amir_5674 6689046 6691562 - protein of unknown function DUF214 PFAM: protein of unknown function DUF214~KEGG: aeh:Mlg_1312 hypothetical protein gene gene5738 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5674 Amir_5675 Amir_5675 Amir_5675 6691562 6692314 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: aba:Acid345_0970 ABC transporter%2C ATPase subunit gene gene5739 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5675 Amir_5676 Amir_5676 Amir_5676 6692533 6695394 - transcriptional regulator%2C LuxR family PFAM: regulatory protein LuxR%3B Tetratricopeptide TPR_4~SMART: regulatory protein LuxR%3B AAA ATPase~KEGG: rlt:Rleg2_5436 transcriptional regulator%2C LuxR family gene gene5740 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5676 Amir_5677 Amir_5677 Amir_5677 6695531 6698428 - transcriptional regulator%2C SARP family PFAM: transcriptional activator domain%3B TPR repeat- containing protein%3B NB-ARC domain protein%3B transcriptional regulator domain protein~SMART: Tetratricopeptide domain protein~KEGG: scl:sce3550 hypothetical protein gene gene5741 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5677 Amir_5678 Amir_5678 Amir_5678 6698964 6699629 - SNARE associated Golgi protein PFAM: SNARE associated Golgi protein~KEGG: ssn:SSON_2375 hypothetical protein gene gene5742 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5678 Amir_5679 Amir_5679 Amir_5679 6699936 6700127 - protein of unknown function DUF397 PFAM: protein of unknown function DUF397 gene gene5743 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5679 Amir_5680 Amir_5680 Amir_5680 6700146 6700994 - transcriptional regulator%2C XRE family PFAM: helix-turn-helix domain protein~SMART: helix-turn-helix domain protein gene gene5744 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5680 Amir_5681 Amir_5681 Amir_5681 6701169 6701549 + hypothetical protein gene gene5745 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5681 Amir_5682 Amir_5682 Amir_5682 6701944 6704163 + Carbonate dehydratase PFAM: carbonic anhydrase%3B sulphate transporter%3B Xanthine/uracil/vitamin C permease~KEGG: mxa:MXAN_4784 inorganic anion transporter%2C sulfate permease (SulP) family gene gene5746 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5682 Amir_5683 Amir_5683 Amir_5683 6704244 6705683 - 6-phosphogluconate dehydrogenase%2C decarboxylating TIGRFAM: 6-phosphogluconate dehydrogenase%2C decarboxylating~PFAM: 6-phosphogluconate dehydrogenase domain protein%3B 6-phosphogluconate dehydrogenase NAD-binding~KEGG: bsu:BSU23860 6-phosphogluconate dehydrogenase gene gene5747 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5683 Amir_5684 Amir_5684 Amir_5684 6705946 6707874 - RNA polymerase%2C sigma-24 subunit%2C ECF subfamily TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family~PFAM: sigma-70 region 2 domain protein~KEGG: hypothetical protein gene gene5748 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5684 Amir_5685 Amir_5685 Amir_5685 6707962 6709350 + Aromatic-L-amino-acid decarboxylase PFAM: Pyridoxal-dependent decarboxylase~KEGG: aba:Acid345_2160 aromatic-L-amino-acid decarboxylase gene gene5749 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5685 Amir_5686 Amir_5686 Amir_5686 6709518 6710450 - acyl-CoA thioesterase II KEGG: met:M446_5500 acyl-CoA thioesterase II~TIGRFAM: acyl-CoA thioesterase II~PFAM: acyl-CoA thioesterase gene gene5750 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5686 Amir_5687 Amir_5687 Amir_5687 6710466 6711890 - pyruvate kinase KEGG: gur:Gura_4409 pyruvate kinase~TIGRFAM: pyruvate kinase~PFAM: Pyruvate kinase barrel%3B Pyruvate kinase alpha/beta gene gene5751 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5687 Amir_5688 Amir_5688 Amir_5688 6711976 6712335 + VanZ family protein PFAM: VanZ family protein~KEGG: jan:Jann_0771 VanZ like protein gene gene5752 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5688 Amir_5689 Amir_5689 Amir_5689 6712420 6713076 - conserved hypothetical protein KEGG: hch:HCH_00125 hypothetical protein gene gene5753 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5689 Amir_5690 Amir_5690 Amir_5690 6713371 6714273 - hypothetical protein gene gene5754 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5690 Amir_5691 Amir_5691 Amir_5691 6714380 6715741 - hypothetical protein KEGG: xau:Xaut_0919 leucine-rich repeat-containing protein gene gene5755 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5691 Amir_5692 Amir_5692 Amir_5692 6716066 6717568 - glutamate synthase%2C NADH/NADPH%2C small subunit TIGRFAM: glutamate synthase%2C NADH/NADPH%2C small subunit~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase%3B FAD dependent oxidoreductase~KEGG: sus:Acid_3815 glutamate synthase (NADH) small subunit gene gene5756 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5692 Amir_5693 Amir_5693 Amir_5693 6717561 6722099 - Glutamate synthase (ferredoxin) PFAM: ferredoxin-dependent glutamate synthase%3B glutamate synthase alpha subunit domain protein%3B glutamate synthase%3B glutamine amidotransferase class-II~KEGG: afw:Anae109_0854 glutamate synthase (ferredoxin) gene gene5757 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5693 Amir_5694 Amir_5694 Amir_5694 6723006 6724376 - sodium:dicarboxylate symporter PFAM: sodium:dicarboxylate symporter~KEGG: gur:Gura_0381 sodium:dicarboxylate symporter gene gene5758 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5694 Amir_5695 Amir_5695 Amir_5695 6724957 6725883 + TRAP transporter solute receptor%2C TAXI family TIGRFAM: TRAP transporter solute receptor%2C TAXI family~KEGG: sfu:Sfum_3723 TRAP transporter solute receptor%2C TAXI family gene gene5759 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5695 Amir_5696 Amir_5696 Amir_5696 6726232 6727599 - histidine kinase PFAM: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B histidine kinase HAMP region domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase HAMP region domain protein%3B histidine kinase A domain protein~KEGG: mex:Mext_0328 ATPase domain-containing protein gene gene5760 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5696 Amir_5697 Amir_5697 Amir_5697 6727708 6728274 + hypothetical protein KEGG: scl:sce7916 hypothetical protein gene gene5761 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5697 Amir_5698 Amir_5698 Amir_5698 6728338 6729006 - two component transcriptional regulator%2C winged helix family PFAM: response regulator receiver%3B transcriptional regulator domain protein~SMART: response regulator receiver~KEGG: ade:Adeh_3856 two component transcriptional regulator gene gene5762 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5698 Amir_5699 Amir_5699 Amir_5699 6729013 6730128 - prolipoprotein diacylglyceryl transferase TIGRFAM: prolipoprotein diacylglyceryl transferase~PFAM: prolipoprotein diacylglyceryl transferase~KEGG: bha:BH3589 prolipoprotein diacylglyceryl transferase gene gene5763 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5699 Amir_5700 Amir_5700 Amir_5700 6730301 6731086 - tryptophan synthase%2C alpha subunit KEGG: acp:A2cp1_4201 tryptophan synthase%2C alpha subunit~TIGRFAM: tryptophan synthase%2C alpha subunit~PFAM: tryptophan synthase alpha chain gene gene5764 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5700 Amir_5701 Amir_5701 Amir_5701 6731083 6732318 - tryptophan synthase%2C beta subunit TIGRFAM: tryptophan synthase%2C beta subunit~PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit~KEGG: bcm:Bcenmc03_3570 tryptophan synthase%2C beta subunit gene gene5765 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5701 Amir_5702 Amir_5702 Amir_5702 6732330 6733145 - Indole-3-glycerol-phosphate synthase PFAM: Indole-3-glycerol phosphate synthase~KEGG: afw:Anae109_0373 indole-3-glycerol-phosphate synthase gene gene5766 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5702 Amir_5703 Amir_5703 Amir_5703 6733361 6733993 - conserved hypothetical protein KEGG: azo:azo0239 hypothetical protein gene gene5767 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5703 Amir_5704 Amir_5704 Amir_5704 6734079 6735620 - anthranilate synthase component I KEGG: gsu:GSU2383 anthranilate synthase component I~TIGRFAM: anthranilate synthase component I~PFAM: Chorismate binding-like%3B Anthranilate synthase component I domain protein gene gene5768 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5704 Amir_5705 Amir_5705 Amir_5705 6735739 6736401 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: mlo:mlr3851 TetR family transcriptional regulator gene gene5769 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5705 Amir_5706 Amir_5706 Amir_5706 6736326 6736700 - Phosphoribosyl-AMP cyclohydrolase PFAM: phosphoribosyl-AMP cyclohydrolase~KEGG: mag:amb2307 phosphoribosyl-AMP cyclohydrolase gene gene5770 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5706 Amir_5707 Amir_5707 Amir_5707 6736700 6737062 - hypothetical protein KEGG: pen:PSEEN4801 sensor histidine kinase gene gene5771 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5707 Amir_5708 Amir_5708 Amir_5708 6737062 6737835 - imidazoleglycerol phosphate synthase%2C cyclase subunit TIGRFAM: imidazoleglycerol phosphate synthase%2C cyclase subunit~PFAM: histidine biosynthesis protein~KEGG: rce:RC1_3299 imidazoleglycerol phosphate synthase%2C cyclase subunit gene gene5772 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5708 Amir_5709 Amir_5709 Amir_5709 6737946 6738335 - death-on-curing family protein TIGRFAM: death-on-curing family protein~PFAM: filamentation induced by cAMP protein Fic~KEGG: pla:Plav_1338 death-on-curing family protein gene gene5773 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5709 Amir_5710 Amir_5710 Amir_5710 6738459 6738827 + hypothetical protein gene gene5774 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5710 Amir_5711 Amir_5711 Amir_5711 6738866 6739588 + Clp domain protein PFAM: Clp domain protein~KEGG: Os12g0230100%3B hypothetical protein%3B K03696 ATP-dependent Clp protease ATP-binding subunit ClpC gene gene5775 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5711 Amir_5712 Amir_5712 Amir_5712 6739551 6740285 - bifunctional HisA/TrpF protein KEGG: plu:plu0797 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4- carboxamide isomerase~TIGRFAM: bifunctional HisA/TrpF protein~PFAM: histidine biosynthesis protein gene gene5776 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5712 Amir_5713 Amir_5713 Amir_5713 6740335 6740967 - imidazole glycerol phosphate synthase%2C glutamine amidotransferase subunit TIGRFAM: imidazole glycerol phosphate synthase%2C glutamine amidotransferase subunit~PFAM: glutamine amidotransferase class-I~KEGG: xau:Xaut_2291 imidazole glycerol phosphate synthase%2C glutamine amidotransferase subunit gene gene5777 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5713 Amir_5714 Amir_5714 Amir_5714 6740978 6741466 - hypothetical protein gene gene5778 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5714 Amir_5715 Amir_5715 Amir_5715 6741504 6742394 - Transketolase central region PFAM: Transketolase central region%3B Transketolase domain protein~KEGG: rpe:RPE_1518 transketolase%2C central region gene gene5779 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5715 Amir_5716 Amir_5716 Amir_5716 6742391 6743077 - Transketolase domain protein PFAM: Transketolase domain protein~KEGG: bja:blr5426 transketolase gene gene5780 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5716 Amir_5717 Amir_5717 Amir_5717 6743101 6743592 + transcriptional regulator%2C MerR family KEGG: aav:Aave_2276 transcriptional regulator%2C MerR family~TIGRFAM: redox-sensitive transcriptional activator SoxR~PFAM: Transcription regulator MerR DNA binding%3B regulatory protein MerR~SMART: regulatory protein MerR gene gene5781 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5717 Amir_5718 Amir_5718 Amir_5718 6743603 6744127 + phosphotransferase KptA/Tpt1 PFAM: phosphotransferase KptA/Tpt1~KEGG: rle:RL2607 putative RNA 2'-phosphotransferase gene gene5782 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5718 Amir_5719 Amir_5719 Amir_5719 6744177 6744317 - hypothetical protein gene gene5783 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5719 Amir_5720 Amir_5720 Amir_5720 6744333 6744935 - Imidazoleglycerol-phosphate dehydratase PFAM: imidazoleglycerol-phosphate dehydratase~KEGG: acr:Acry_1413 imidazoleglycerol-phosphate dehydratase gene gene5784 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5720 Amir_5721 Amir_5721 Amir_5721 6744932 6746083 - histidinol-phosphate aminotransferase TIGRFAM: histidinol-phosphate aminotransferase~PFAM: aminotransferase class I and II~KEGG: bur:Bcep18194_C7445 histidinol-phosphate aminotransferase gene gene5785 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5721 Amir_5722 Amir_5722 Amir_5722 6746080 6747396 - histidinol dehydrogenase KEGG: swi:Swit_2776 histidinol dehydrogenase~TIGRFAM: histidinol dehydrogenase~PFAM: histidinol dehydrogenase gene gene5786 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5722 Amir_5723 Amir_5723 Amir_5723 6747591 6748910 + peptidase M14 carboxypeptidase A PFAM: peptidase M14 carboxypeptidase A~SMART: peptidase M14 carboxypeptidase A~KEGG: bba:Bd3234 carboxypeptidase T precursor gene gene5787 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5723 Amir_5724 Amir_5724 Amir_5724 6749030 6750211 - aminotransferase class V PFAM: aminotransferase class V%3B aromatic amino acid beta-eliminating lyase/threonine aldolase~KEGG: scl:sce8911 class-V aminotransferase gene gene5788 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5724 Amir_5725 Amir_5725 Amir_5725 6750196 6751755 - extracellular solute-binding protein family 5 PFAM: extracellular solute-binding protein family 5~KEGG: ses:SARI_01727 hypothetical protein gene gene5789 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5725 Amir_5726 Amir_5726 Amir_5726 6751772 6752551 + Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase~KEGG: eta:ETA_23610 putative hydrolase gene gene5790 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5726 Amir_5727 Amir_5727 Amir_5727 6752703 6753140 + PRC-barrel domain protein PFAM: PRC-barrel domain protein~KEGG: atc:AGR_C_723 hypothetical protein gene gene5791 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5727 Amir_5728 Amir_5728 Amir_5728 6753345 6754208 - nicotinate-nucleotide pyrophosphorylase TIGRFAM: nicotinate-nucleotide pyrophosphorylase~PFAM: Quinolinate phosphoribosyl transferase~KEGG: pzu:PHZ_c2609 nicotinate-nucleotide pyrophosphorylase gene gene5792 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5728 Amir_5729 Amir_5729 Amir_5729 6754288 6755904 - L-aspartate oxidase KEGG: sus:Acid_7341 L-aspartate oxidase~TIGRFAM: L-aspartate oxidase~PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein gene gene5793 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5729 Amir_5730 Amir_5730 Amir_5730 6755901 6756920 - quinolinate synthetase complex%2C A subunit KEGG: sat:SYN_01258 quinolinate synthetase~TIGRFAM: quinolinate synthetase complex%2C A subunit~PFAM: Quinolinate synthetase A gene gene5794 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5730 Amir_5731 Amir_5731 Amir_5731 6756994 6757683 + NUDIX hydrolase PFAM: NUDIX hydrolase~KEGG: dal:Dalk_4948 NUDIX hydrolase gene gene5795 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5731 Amir_5732 Amir_5732 Amir_5732 6757680 6758360 + peptidase S16 lon domain protein PFAM: peptidase S16 lon domain protein~SMART: peptidase S16 lon domain protein~KEGG: pau:PA14_11940 hypothetical protein gene gene5796 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5732 Amir_5733 Amir_5733 Amir_5733 6758678 6759661 - pseudogene gene5797 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5733 Amir_5734 Amir_5734 Amir_5734 6759781 6761052 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1%3B General substrate transporter~KEGG: cti:RALTA_B1248 putative muconolactone transporter%3B major facilitator superfamily MFS_1 gene gene5798 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5734 Amir_5735 Amir_5735 Amir_5735 6761141 6761896 + protein of unknown function DUF1445 PFAM: protein of unknown function DUF1445~KEGG: pde:Pden_0321 hypothetical protein gene gene5799 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5735 Amir_5736 Amir_5736 Amir_5736 6761903 6763198 - hypothetical protein KEGG: trans-sialidase gene gene5800 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5736 Amir_5737 Amir_5737 Amir_5737 6763292 6763489 - hypothetical protein gene gene5801 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5737 Amir_5738 Amir_5738 Amir_5738 6763486 6764529 - biotin synthase KEGG: hha:Hhal_0963 biotin synthase~TIGRFAM: biotin synthase~PFAM: biotin and thiamin synthesis associated%3B Radical SAM domain protein~SMART: Elongator protein 3/MiaB/NifB gene gene5802 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5738 Amir_5739 Amir_5739 Amir_5739 6764613 6765341 - dethiobiotin synthase TIGRFAM: dethiobiotin synthase~KEGG: ade:Adeh_0070 dethiobiotin synthase gene gene5803 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5739 Amir_5740 Amir_5740 Amir_5740 6765390 6765635 + glutaredoxin PFAM: glutaredoxin~KEGG: mno:Mnod_5953 glutaredoxin 3 gene gene5804 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5740 Amir_5741 Amir_5741 Amir_5741 6765641 6766285 + hypothetical protein KEGG: MFS transporter gene gene5805 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5741 Amir_5742 Amir_5742 Amir_5742 6766265 6767548 - adenosylmethionine-8-amino-7-oxononanoateaminotr ansferase TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase~PFAM: aminotransferase class-III~KEGG: scl:sce0693 adenosylmethionine--8-amino-7- oxononanoate transaminase gene gene5806 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5742 Amir_5743 Amir_5743 Amir_5743 6768297 6771827 - DNA polymerase III%2C alpha subunit KEGG: pca:Pcar_1222 DNA polymerase III%2C alpha subunit~TIGRFAM: DNA polymerase III%2C alpha subunit~PFAM: DNA polymerase III alpha subunit%3B PHP domain protein%3B nucleic acid binding OB-fold tRNA/helicase-type~SMART: phosphoesterase PHP domain protein gene gene5807 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5743 Amir_5744 Amir_5744 Amir_5744 6772069 6772941 + hypothetical protein KEGG: GA25950 gene product from transcript GA25950- RA gene gene5808 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5744 Amir_5745 Amir_5745 Amir_5745 6773314 6774567 + drug resistance transporter%2C Bcr/CflA subfamily TIGRFAM: drug resistance transporter%2C Bcr/CflA subfamily~PFAM: major facilitator superfamily MFS_1~KEGG: bce:BC0204 bicyclomycin resistance protein gene gene5809 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5745 Amir_5746 Amir_5746 Amir_5746 6774660 6775592 - pseudouridine synthase%2C RluA family KEGG: gsu:GSU0082 ribosomal large subunit pseudouridine synthase D~TIGRFAM: pseudouridine synthase%2C RluA family~PFAM: pseudouridine synthase%3B RNA-binding S4 domain protein gene gene5810 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5746 Amir_5747 Amir_5747 Amir_5747 6775589 6776353 - lipoprotein signal peptidase TIGRFAM: lipoprotein signal peptidase~PFAM: peptidase A8 signal peptidase II~KEGG: sde:Sde_2565 signal peptidase II gene gene5811 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5747 Amir_5748 Amir_5748 Amir_5748 6776394 6777752 - aminotransferase class V PFAM: aminotransferase class V%3B aromatic amino acid beta-eliminating lyase/threonine aldolase~KEGG: scl:sce1210 hypothetical protein gene gene5812 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5748 Amir_5749 Amir_5749 Amir_5749 6778117 6779595 - sodium/hydrogen exchanger PFAM: sodium/hydrogen exchanger%3B TrkA-C domain protein~KEGG: afw:Anae109_0927 sodium/hydrogen exchanger gene gene5813 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5749 Amir_5750 Amir_5750 Amir_5750 6780151 6780839 - pseudogene gene5814 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5750 Amir_5751 Amir_5751 Amir_5751 6781173 6781736 + GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: sme:SMa1660 hypothetical protein gene gene5815 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5751 Amir_5752 Amir_5752 Amir_5752 6781872 6782144 - protein of unknown function DUF167 PFAM: protein of unknown function DUF167~KEGG: scl:sce8156 hypothetical protein gene gene5816 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5752 Amir_5753 Amir_5753 Amir_5753 6782243 6785356 - isoleucyl-tRNA synthetase TIGRFAM: isoleucyl-tRNA synthetase~KEGG: rco:RC0953 isoleucyl-tRNA synthetase gene gene5817 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5753 Amir_5754 Amir_5754 Amir_5754 6785621 6786352 - hypothetical protein KEGG: col-102%3B COllagen gene gene5818 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5754 Amir_5755 Amir_5755 Amir_5755 6786401 6787222 - DivIVA family protein PFAM: DivIVA family protein~KEGG: hypothetical protein gene gene5819 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5755 Amir_5756 Amir_5756 Amir_5756 6787268 6787552 - protein of unknown function YGGT PFAM: protein of unknown function YGGT gene gene5820 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5756 Amir_5757 Amir_5757 Amir_5757 6787573 6788220 - protein of unknown function DUF552 PFAM: protein of unknown function DUF552~KEGG: bha:BH2549 hypothetical protein gene gene5821 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5757 Amir_5758 Amir_5758 Amir_5758 6788288 6788983 - alanine racemase domain protein PFAM: alanine racemase domain protein~KEGG: pag:PLES_03921 putative PLP dependent enzyme gene gene5822 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5758 Amir_5759 Amir_5759 Amir_5759 6788980 6789666 - protein of unknown function DUF152 PFAM: protein of unknown function DUF152~KEGG: tgr:Tgr7_0816 protein of unknown function DUF152 gene gene5823 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5759 Amir_5760 Amir_5760 Amir_5760 6789842 6791056 - cell division protein FtsZ TIGRFAM: cell division protein FtsZ~PFAM: Tubulin/FtsZ GTPase%3B Tubulin/FtsZ domain protein~KEGG: bat:BAS3757 cell division protein FtsZ gene gene5824 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5760 Amir_5761 Amir_5761 Amir_5761 6791578 6792300 - Polypeptide-transport-associated domain protein FtsQ-type PFAM: Polypeptide-transport-associated domain protein FtsQ-type%3B cell division protein FtsQ~KEGG: ade:Adeh_3776 cell division protein FtsQ gene gene5825 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5761 Amir_5762 Amir_5762 Amir_5762 6792297 6793697 - UDP-N-acetylmuramate/alanine ligase TIGRFAM: UDP-N-acetylmuramate/alanine ligase~PFAM: cytoplasmic peptidoglycan synthetase domain protein%3B Mur ligase middle domain protein~KEGG: dds:Ddes_1114 UDP-N-acetylmuramate/alanine ligase gene gene5826 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5762 Amir_5763 Amir_5763 Amir_5763 6793694 6794764 - UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase KEGG: aba:Acid345_3629 UDP-N-acetylglucosamine--N- acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase~TIGRFAM:UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase~PFAM: Glycosyltransferase 28 domain%3B glycosyl transferase family 28 gene gene5827 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5763 Amir_5764 Amir_5764 Amir_5764 6795220 6796683 - cell division protein FtsW TIGRFAM: cell division protein FtsW~PFAM: cell cycle protein~KEGG: bce:BC3911 stage V sporulation protein E gene gene5828 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5764 Amir_5765 Amir_5765 Amir_5765 6796793 6798007 - hypothetical protein KEGG: rec:RHECIAT_PA0000107 hypothetical protein gene gene5829 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5765 Amir_5766 Amir_5766 Amir_5766 6798009 6798470 - hypothetical protein gene gene5830 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5766 Amir_5767 Amir_5767 Amir_5767 6798490 6799767 - Putative FAD-dependent dehydrogenase-like protein KEGG: sfu:Sfum_1001 FAD dependent oxidoreductase gene gene5831 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5767 Amir_5768 Amir_5768 Amir_5768 6799922 6801274 - UDP-N-acetylmuramoylalanine/D-glutamate ligase TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase~PFAM: Mur ligase middle domain protein%3B cytoplasmic peptidoglycan synthetase domain protein~KEGG: scl:sce1662 UDP-N-acetylmuramoylalanine-D- glutamate ligase gene gene5832 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5768 Amir_5769 Amir_5769 Amir_5769 6801277 6802365 - phospho-N-acetylmuramoyl-pentapeptide-transferas e KEGG: bsu:BSU15190 phospho-N-acetylmuramoyl- pentapeptide-transferase~TIGRFAM:phospho-N-acetylmuramoyl-pentapeptide-transf erase~PFAM: glycosyl transferase family 4 gene gene5833 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5769 Amir_5770 Amir_5770 Amir_5770 6802362 6803834 - UDP-N-acetylmuramoylalanyl-D-glutamyl-2%2C6-diamin opimelate/D-alanyl-D-alanylligase TIGRFAM:UDP-N-acetylmuramoylalanyl-D-glutamyl-2%2C6-di aminopimelate/D-alanyl-D-alanylligase~PFAM: Mur ligase middle domain protein%3B cytoplasmic peptidoglycan synthetase domain protein~KEGG: aeh:Mlg_2197 UDP-N-acetylmuramoyl-tripeptide-- D-alanyl-D-alanine ligase gene gene5834 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5770 Amir_5771 Amir_5771 Amir_5771 6803831 6805414 - UDP-N-acetylmuramyl-tripeptide synthetase TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase~PFAM: Mur ligase middle domain protein%3B cytoplasmic peptidoglycan synthetase domain protein~KEGG: ade:Adeh_3766 UDP-N-acetylmuramoylalanyl-D- glutamate--2%2C6-diaminopimelate ligase gene gene5835 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5771 Amir_5772 Amir_5772 Amir_5772 6805477 6807384 - Peptidoglycan glycosyltransferase PFAM: penicillin-binding protein transpeptidase%3B Penicillin-binding protein dimerization domain~KEGG: ppd:Ppro_3295 peptidoglycan glycosyltransferase gene gene5836 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5772 Amir_5773 Amir_5773 Amir_5773 6807922 6808683 - hypothetical protein KEGG: hypothetical protein gene gene5837 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5773 Amir_5774 Amir_5774 Amir_5774 6808680 6809630 - S-adenosyl-methyltransferase MraW TIGRFAM: S-adenosyl-methyltransferase MraW~PFAM: methyltransferase~KEGG: gbm:Gbem_0483 S-adenosyl-methyltransferase MraW gene gene5838 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5774 Amir_5775 Amir_5775 Amir_5775 6810010 6810441 - MraZ protein TIGRFAM: MraZ protein~PFAM: protein of unknown function UPF0040~KEGG: bha:BH2576 cell division protein MraZ gene gene5839 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5775 Amir_5776 Amir_5776 Amir_5776 6810934 6811998 + ATPase associated with various cellular activities AAA_3 PFAM: ATPase associated with various cellular activities AAA_3%3B ATPase associated with various cellular activities AAA_5~KEGG: bha:BH0604 methanol dehydrogenase regulatory protein gene gene5840 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5776 Amir_5777 Amir_5777 Amir_5777 6812000 6813289 + protein of unknown function DUF58 PFAM: protein of unknown function DUF58~KEGG: gur:Gura_0188 hypothetical protein gene gene5841 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5777 Amir_5778 Amir_5778 Amir_5778 6813290 6815737 + transglutaminase domain protein PFAM: transglutaminase domain protein~SMART: transglutaminase domain protein~KEGG: aba:Acid345_2146 transglutaminase-like gene gene5842 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5778 Amir_5779 Amir_5779 Amir_5779 6816367 6816753 - hypothetical protein gene gene5843 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5779 Amir_5780 Amir_5780 Amir_5780 6817206 6818273 - hypothetical protein KEGG: GF24314 gene product from transcript GF24314- RA gene gene5844 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5780 Amir_5781 Amir_5781 Amir_5781 6818311 6819327 - hypothetical protein KEGG: similar to keratinocytes proline-rich protein gene gene5845 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5781 Amir_5782 Amir_5782 Amir_5782 6819539 6819802 - hypothetical protein gene gene5846 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5782 Amir_5783 Amir_5783 Amir_5783 6819882 6820520 - transcriptional regulator%2C Crp/Fnr family PFAM: cyclic nucleotide-binding%3B regulatory protein Crp~SMART: regulatory protein Crp%3B cyclic nucleotide- binding~KEGG: lch:Lcho_0755 Crp/FNR family transcriptional regulator gene gene5847 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5783 Amir_5784 Amir_5784 Amir_5784 6820903 6822195 - DNA-directed DNA polymerase PFAM: UMUC domain protein DNA-repair protein~KEGG: acp:A2cp1_0159 DNA-directed DNA polymerase gene gene5848 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5784 Amir_5785 Amir_5785 Amir_5785 6822244 6823335 - amidohydrolase 2 PFAM: amidohydrolase 2~KEGG: hypothetical protein gene gene5849 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5785 Amir_5786 Amir_5786 Amir_5786 6823374 6824702 + glutamine synthetase catalytic region PFAM: glutamine synthetase catalytic region~KEGG: pag:PLES_59041 putative glutamine synthetase gene gene5850 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5786 Amir_5787 Amir_5787 Amir_5787 6824722 6825315 - RNA polymerase%2C sigma-24 subunit%2C ECF subfamily TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family~PFAM: sigma-70 region 2 domain protein%3B Sigma-70 region 4 type 2%3B sigma-70 region 4 domain protein~KEGG: rpb:RPB_3555 RNA polymerase sigma factor gene gene5851 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5787 Amir_5788 Amir_5788 Amir_5788 6825326 6826057 - Methyltransferase type 12 PFAM: Methyltransferase type 12%3B Methyltransferase type 11~KEGG: ank:AnaeK_0691 methyltransferase type 11 gene gene5852 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5788 Amir_5789 Amir_5789 Amir_5789 6826092 6826928 + Cobyrinic acid ac-diamide synthase PFAM: Cobyrinic acid ac-diamide synthase~KEGG: gox:GOX1063 chromosome partitioning protein ParA gene gene5853 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5789 Amir_5790 Amir_5790 Amir_5790 6826950 6827747 + DNA glycosylase/AP lyase%2C H2TH DNA-binding PFAM: DNA glycosylase/AP lyase%2C H2TH DNA-binding%3B Formamidopyrimidine-DNA glycosylase catalytic domain protein~KEGG: afw:Anae109_1725 DNA-(apurinic or apyrimidinic site) lyase gene gene5854 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5790 Amir_5791 Amir_5791 Amir_5791 6827758 6828786 + dihydroorotate dehydrogenase KEGG: cps:CPS_2800 dihydroorotate dehydrogenase~TIGRFAM: dihydroorotate dehydrogenase~PFAM: dihydroorotate dehydrogenase gene gene5855 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5791 Amir_5792 Amir_5792 Amir_5792 6828793 6829443 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: rso:RS05498 putative transcription regulator protein gene gene5856 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5792 Amir_5793 Amir_5793 Amir_5793 6829547 6830260 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: bpy:Bphyt_6660 short-chain dehydrogenase/reductase SDR gene gene5857 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5793 Amir_5794 Amir_5794 Amir_5794 6830296 6831543 - Xanthine/uracil/vitamin C permease PFAM: Xanthine/uracil/vitamin C permease~KEGG: bmv:BMASAVP1_A3006 uracil-xanthine permease gene gene5858 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5794 Amir_5795 Amir_5795 Amir_5795 6832041 6832829 - hypothetical protein KEGG: jan:Jann_1769 mucin-associated surface protein gene gene5859 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5795 Amir_5796 Amir_5796 Amir_5796 6832844 6833710 - phage shock protein A%2C PspA PFAM: PspA/IM30 family protein~KEGG: GG12650 gene product from transcript GG12650- RA gene gene5860 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5796 Amir_5797 Amir_5797 Amir_5797 6833998 6834414 - helix-turn-helix domain protein PFAM: helix-turn-helix domain protein~SMART: helix-turn-helix domain protein~KEGG: pde:Pden_1785 helix-turn-helix domain protein gene gene5861 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5797 Amir_5798 Amir_5798 Amir_5798 6834580 6835191 - CinA domain protein PFAM: CinA domain protein~KEGG: hypothetical protein gene gene5862 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5798 Amir_5799 Amir_5799 Amir_5799 6835188 6835772 - CDP-diacylglycerol/glycerol-3-phosphate3-phospha tidyltransferase TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3- phosphatidyltransferase~PFAM: CDP-alcohol phosphatidyltransferase~KEGG: bha:BH2386 phosphatidylglycerophosphate synthase gene gene5863 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5799 Amir_5800 Amir_5800 Amir_5800 6835769 6837178 - MiaB-like tRNA modifying enzyme YliG KEGG: ank:AnaeK_0100 MiaB-like tRNA modifying enzyme YliG~TIGRFAM: MiaB-like tRNA modifying enzyme YliG%3B RNA modification enzyme%2C MiaB family~PFAM: Protein of unknown function UPF0004%3B Radical SAM domain protein~SMART: Elongator protein 3/MiaB/NifB gene gene5864 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5800 Amir_5801 Amir_5801 Amir_5801 6837451 6837951 + GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: gme:Gmet_0946 acetyltransferase gene gene5865 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5801 Amir_5802 Amir_5802 Amir_5802 6838066 6838920 + transcriptional regulator%2C MerR family SMART: regulatory protein MerR~KEGG: bmn:BMA10247_A1013 MerR family transcriptional regulator gene gene5866 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5802 Amir_5803 Amir_5803 Amir_5803 6839066 6839521 + phospholipase A2 PFAM: Prokaryotic phospholipase A2~KEGG: hypothetical protein gene gene5867 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5803 Amir_5804 Amir_5804 Amir_5804 6839532 6842093 - cell divisionFtsK/SpoIIIE PFAM: cell divisionFtsK/SpoIIIE~KEGG: bha:BH2395 hypothetical protein gene gene5868 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5804 Amir_5805 Amir_5805 Amir_5805 6842226 6843032 + phospholipid/glycerol acyltransferase PFAM: phospholipid/glycerol acyltransferase~SMART: phospholipid/glycerol acyltransferase~KEGG: dde:Dde_1136 1-acyl-sn-glycerol-3-phosphate acyltransferase gene gene5869 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5805 Amir_5806 Amir_5806 Amir_5806 6843154 6844833 - beta-lactamase domain protein PFAM: beta-lactamase domain protein%3B RNA- metabolising metallo-beta-lactamase~KEGG: gme:Gmet_0366 hypothetical protein gene gene5870 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5806 Amir_5807 Amir_5807 Amir_5807 6844830 6845726 - dihydrodipicolinate synthase KEGG: bha:BH2399 dihydrodipicolinate synthase~TIGRFAM: dihydrodipicolinate synthase~PFAM: dihydrodipicolinate synthetase gene gene5871 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5807 Amir_5808 Amir_5808 Amir_5808 6845764 6846384 - hypothetical protein gene gene5872 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5808 Amir_5809 Amir_5809 Amir_5809 6846455 6847918 - serine/threonine protein kinase PFAM: Serine/threonine protein kinase-related%3B tyrosine protein kinase~SMART: serine/threonine protein kinase%3B tyrosine protein kinase~KEGG: sus:Acid_3693 serine/threonine protein kinase gene gene5873 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5809 Amir_5810 Amir_5810 Amir_5810 6848000 6848373 - pseudogene gene5874 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5810 Amir_5811 Amir_5811 Amir_5811 6848385 6849137 - thymidylate synthase%2C flavin-dependent KEGG: rru:Rru_A2792 FAD-dependent thymidylate synthase~TIGRFAM: thymidylate synthase%2C flavin-dependent~PFAM: thymidylate synthase complementing protein ThyX gene gene5875 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5811 Amir_5812 Amir_5812 Amir_5812 6849368 6849925 + HicB family protein PFAM: HicB family protein~KEGG: GI22065 gene product from transcript GI22065- RA gene gene5876 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5812 Amir_5813 Amir_5813 Amir_5813 6849947 6850840 + hypothetical protein KEGG: aba:Acid345_3530 hypothetical protein gene gene5877 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5813 Amir_5814 Amir_5814 Amir_5814 6851015 6851602 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: bja:bll5689 transcriptional regulatory protein gene gene5878 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5814 Amir_5815 Amir_5815 Amir_5815 6852028 6852779 - pseudogene gene5879 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5815 Amir_5816 Amir_5816 Amir_5816 6853486 6854484 - aldo/keto reductase PFAM: aldo/keto reductase~KEGG: rlt:Rleg2_2710 aldo/keto reductase gene gene5880 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5816 Amir_5817 Amir_5817 Amir_5817 6854561 6855781 - protein of unknown function DUF1006 PFAM: protein of unknown function DUF1006~KEGG: pae:PA2844 hypothetical protein gene gene5881 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5817 Amir_5818 Amir_5818 Amir_5818 6855837 6856403 + GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: bac:BamMC406_4804 GCN5-related N- acetyltransferase gene gene5882 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5818 Amir_5819 Amir_5819 Amir_5819 6856411 6856914 + hypothetical protein gene gene5883 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5819 Amir_5820 Amir_5820 Amir_5820 6856993 6857445 - hypothetical protein gene gene5884 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5820 Amir_5821 Amir_5821 Amir_5821 6857442 6858149 - dihydrodipicolinate reductase KEGG: bcz:BCZK1415 dihydrodipicolinate reductase~TIGRFAM: dihydrodipicolinate reductase~PFAM: dihydrodipicolinate reductase gene gene5885 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5821 Amir_5822 Amir_5822 Amir_5822 6858206 6859591 - peptidase M16 domain protein PFAM: peptidase M16 domain protein~KEGG: gur:Gura_1907 peptidase M16 domain-containing protein gene gene5886 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5822 Amir_5823 Amir_5823 Amir_5823 6859588 6861831 - guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase KEGG: ilo:IL0964 polynucleotide phosphorylase/polyadenylase~TIGRFAM: guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase~PFAM: 3' exoribonuclease%3B Polynucleotide phosphorylase%2C phosphorolytic RNA-binding%2C bacterial/organelle-type%3B RNA binding S1 domain protein%3B Exoribonuclease%2C phosphorolytic domain 2%3B KH type 1 domain protein~SMART: RNA binding S1 domain protein%3B KH domain protein gene gene5887 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5823 Amir_5824 Amir_5824 Amir_5824 6862077 6862346 - ribosomal protein S15 TIGRFAM: ribosomal protein S15~PFAM: ribosomal protein S15~KEGG: gsu:GSU1592 30S ribosomal protein S15 gene gene5888 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5824 Amir_5825 Amir_5825 Amir_5825 6862472 6862933 - 2'-5' RNA ligase TIGRFAM: 2'-5' RNA ligase~PFAM: Phosphoesterase HXTX~KEGG: scl:sce5087 hypothetical protein gene gene5889 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5825 Amir_5826 Amir_5826 Amir_5826 6862930 6863409 - hypothetical protein KEGG: oan:Oant_1395 ABC transporter related gene gene5890 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5826 Amir_5827 Amir_5827 Amir_5827 6863510 6864442 - riboflavin biosynthesis protein RibF TIGRFAM: riboflavin biosynthesis protein RibF%3B cytidyltransferase-related domain protein~PFAM: FAD synthetase%3B Riboflavin kinase~KEGG: dvm:DvMF_1762 riboflavin biosynthesis protein RibF gene gene5891 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5827 Amir_5828 Amir_5828 Amir_5828 6865056 6865955 - tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B~PFAM: pseudouridylate synthase TruB domain protein%3B tRNA pseudouridine synthase II~KEGG: ade:Adeh_1105 tRNA pseudouridine synthase B gene gene5892 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5828 Amir_5829 Amir_5829 Amir_5829 6866028 6867347 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: sus:Acid_3100 major facilitator transporter gene gene5893 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5829 Amir_5830 Amir_5830 Amir_5830 6867439 6868743 - MATE efflux family protein TIGRFAM: MATE efflux family protein~PFAM: multi antimicrobial extrusion protein MatE~KEGG: MATE efflux family protein gene gene5894 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5830 Amir_5831 Amir_5831 Amir_5831 6868828 6869838 - phosphoesterase RecJ domain protein PFAM: phosphoesterase RecJ domain protein%3B phosphoesterase DHHA1~KEGG: pca:Pcar_1558 exopolyphosphatase related protein gene gene5895 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5831 Amir_5832 Amir_5832 Amir_5832 6869849 6870298 - ribosome-binding factor A TIGRFAM: ribosome-binding factor A~PFAM: ribosome-binding factor A~KEGG: tcx:Tcr_1124 ribosome-binding factor A gene gene5896 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5832 Amir_5833 Amir_5833 Amir_5833 6870318 6870614 - protein of unknown function DUF503 PFAM: protein of unknown function DUF503~KEGG: sus:Acid_5182 hypothetical protein gene gene5897 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5833 Amir_5834 Amir_5834 Amir_5834 6870713 6873817 - translation initiation factor IF-2 TIGRFAM: translation initiation factor IF-2%3B small GTP-binding protein~PFAM: protein synthesis factor GTP-binding%3B elongation factor Tu domain 2 protein%3B translation initiation factor IF-2 domain protein%3B Ras family protein~KEGG: dvm:DvMF_2513 translation initiation factor IF-2 gene gene5898 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5834 Amir_5835 Amir_5835 Amir_5835 6873892 6874248 - pseudogene gene5899 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5835 Amir_5836 Amir_5836 Amir_5836 6874271 6875284 - NusA antitermination factor KEGG: bha:BH2416 transcription elongation factor NusA~TIGRFAM: transcription termination factor NusA~PFAM: NusA domain protein~SMART: RNA binding S1 domain protein%3B KH domain protein gene gene5900 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5836 Amir_5837 Amir_5837 Amir_5837 6875281 6875805 - protein of unknown function DUF150 PFAM: protein of unknown function DUF150~KEGG: cbd:CBUD_0561 hypothetical cytosolic protein gene gene5901 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5837 Amir_5838 Amir_5838 Amir_5838 6875961 6876398 + conserved hypothetical protein KEGG: hypothetical protein gene gene5902 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5838 Amir_5839 Amir_5839 Amir_5839 6876395 6876835 + hypothetical protein gene gene5903 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5839 Amir_5840 Amir_5840 Amir_5840 6877030 6877890 - hypothetical protein KEGG: AGAP011399-PA gene gene5904 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5840 Amir_5841 Amir_5841 Amir_5841 6877985 6878986 - aminotransferase class V PFAM: aminotransferase class V~KEGG: acp:A2cp1_4498 aminotransferase class V gene gene5905 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5841 Amir_5842 Amir_5842 Amir_5842 6879088 6879876 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B KR domain protein~KEGG: mex:Mext_3419 short-chain dehydrogenase/reductase SDR gene gene5906 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5842 Amir_5843 Amir_5843 Amir_5843 6879925 6880332 + protein of unknown function UPF0047 PFAM: protein of unknown function UPF0047~KEGG: rpe:RPE_0423 protein of unknown function UPF0047 gene gene5907 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5843 Amir_5844 Amir_5844 Amir_5844 6880457 6881545 + hypothetical protein KEGG: scl:sce6476 hypothetical protein gene gene5908 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5844 Amir_5845 Amir_5845 Amir_5845 6881542 6882228 + hypothetical protein gene gene5909 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5845 Amir_5846 Amir_5846 Amir_5846 6882225 6882914 + Haloacid dehalogenase domain protein hydrolase PFAM: Haloacid dehalogenase domain protein hydrolase~KEGG: ade:Adeh_0672 haloacid dehalogenase-like hydrolase gene gene5910 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5846 Amir_5847 Amir_5847 Amir_5847 6882984 6884729 - prolyl-tRNA synthetase KEGG: maq:Maqu_1735 prolyl-tRNA synthetase~TIGRFAM: prolyl-tRNA synthetase~PFAM: tRNA synthetase class II (G H P and S)%3B YbaK/prolyl-tRNA synthetase associated region%3B Anticodon- binding domain protein gene gene5911 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5847 Amir_5848 Amir_5848 Amir_5848 6884926 6885279 + conserved hypothetical protein KEGG: rle:RL3033 hypothetical protein gene gene5912 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5848 Amir_5849 Amir_5849 Amir_5849 6885718 6886485 + protein of unknown function DUF328 PFAM: protein of unknown function DUF328~KEGG: sun:SUN_0122 hypothetical protein gene gene5913 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5849 Amir_5850 Amir_5850 Amir_5850 6886907 6887578 + transcriptional regulator%2C Crp/Fnr family PFAM: cyclic nucleotide-binding~SMART: cyclic nucleotide-binding~KEGG: swi:Swit_2706 Crp/FNR family transcriptional regulator gene gene5914 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5850 Amir_5851 Amir_5851 Amir_5851 6887701 6888429 + transcriptional regulator%2C Crp/Fnr family PFAM: cyclic nucleotide-binding~SMART: cyclic nucleotide-binding~KEGG: gsu:GSU1992 Crp/FNR family transcriptional regulator gene gene5915 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5851 Amir_5852 Amir_5852 Amir_5852 6888887 6890050 + protein of unknown function RIO1 PFAM: protein of unknown function RIO1~SMART: protein of unknown function RIO1~KEGG: afw:Anae109_3105 protein of unknown function RIO1 gene gene5916 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5852 Amir_5853 Amir_5853 Amir_5853 6890931 6892436 + DEAD/DEAH box helicase domain protein PFAM: DEAD/DEAH box helicase domain protein%3B helicase domain protein~SMART: DEAD-like helicase%3B helicase domain protein~KEGG: smt:Smal_0480 DEAD/DEAH box helicase domain protein gene gene5917 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5853 Amir_5854 Amir_5854 Amir_5854 6892754 6893971 - uroporphyrin-III C-methyltransferase TIGRFAM: uroporphyrin-III C-methyltransferase%3B siroheme synthase~PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase~KEGG: cvi:CV_0813 uroporphyrin-III C- methyltransferase gene gene5918 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5854 Amir_5855 Amir_5855 Amir_5855 6894286 6895071 - peptidase S1 and S6 chymotrypsin/Hap PFAM: peptidase S1 and S6 chymotrypsin/Hap~SMART: peptidase S1 and S6 chymotrypsin/Hap~KEGG: similar to putative trypsin-like proteinase gene gene5919 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5855 Amir_5856 Amir_5856 Amir_5856 6895160 6896419 - cobalamin (vitamin B12) biosynthesis CbiG protein PFAM: cobalamin (vitamin B12) biosynthesis CbiG protein~KEGG: mag:amb0298 precorrin-3B methylase gene gene5920 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5856 Amir_5857 Amir_5857 Amir_5857 6896754 6897602 - pseudogene gene5921 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5857 Amir_5858 Amir_5858 Amir_5858 6897607 6898740 - Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase~KEGG: ppd:Ppro_3231 precorrin-4 C11- methyltransferase gene gene5922 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5858 Amir_5859 Amir_5859 Amir_5859 6898911 6900308 - cobyrinic acid a%2Cc-diamide synthase TIGRFAM: cobyrinic acid a%2Cc-diamide synthase~PFAM: Cobyrinic acid ac-diamide synthase%3B CobB/CobQ domain protein glutamine amidotransferase~KEGG: gsu:GSU3006 cobyrinic acid a%2Cc-diamide synthase gene gene5923 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5859 Amir_5860 Amir_5860 Amir_5860 6900305 6900919 - cob(I)alamin adenosyltransferase TIGRFAM: cob(I)alamin adenosyltransferase~PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP~KEGG: nar:Saro_0331 cob(I)yrinic acid a%2Cc-diamide adenosyltransferase gene gene5924 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5860 Amir_5861 Amir_5861 Amir_5861 6901019 6903061 - Magnesium chelatase KEGG: rso:RS03742 chelatase protein~PFAM: von Willebrand factor type A%3B magnesium chelatase ChlI subunit~SMART: von Willebrand factor type A%3B AAA ATPase gene gene5925 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5861 Amir_5862 Amir_5862 Amir_5862 6903317 6904210 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B KR domain protein~KEGG: bid:Bind_0032 short-chain dehydrogenase/reductase SDR gene gene5926 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5862 Amir_5863 Amir_5863 Amir_5863 6904272 6904940 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: scl:sce4851 TetR family transcriptional regulator gene gene5927 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5863 Amir_5864 Amir_5864 Amir_5864 6905017 6906195 + 8-amino-7-oxononanoate synthase PFAM: aminotransferase class I and II%3B DegT/DnrJ/EryC1/StrS aminotransferase%3B aminotransferase class-III%3B aromatic amino acid beta-eliminating lyase/threonine aldolase~KEGG: afw:Anae109_3561 8-amino-7-oxononanoate synthase gene gene5928 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5864 Amir_5865 Amir_5865 Amir_5865 6906146 6906598 - GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: pap:PSPA7_0190 hypothetical protein gene gene5929 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5865 Amir_5866 Amir_5866 Amir_5866 6906696 6907445 - peptidase S1 and S6 chymotrypsin/Hap PFAM: peptidase S1 and S6 chymotrypsin/Hap~SMART: peptidase S1 and S6 chymotrypsin/Hap~KEGG: similar to oviductin gene gene5930 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5866 Amir_5867 Amir_5867 Amir_5867 6907613 6908227 + Lysine exporter protein (LYSE/YGGA) PFAM: Lysine exporter protein (LYSE/YGGA)~KEGG: cak:Caul_0349 lysine exporter protein LysE/YggA gene gene5931 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5867 Amir_5868 Amir_5868 Amir_5868 6908247 6908978 - peptidase S1 and S6 chymotrypsin/Hap PFAM: peptidase S1 and S6 chymotrypsin/Hap~SMART: peptidase S1 and S6 chymotrypsin/Hap~KEGG: similar to putative trypsin-like proteinase gene gene5932 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5868 Amir_5869 Amir_5869 Amir_5869 6909074 6909817 - peptidase S1 and S6 chymotrypsin/Hap PFAM: peptidase S1 and S6 chymotrypsin/Hap~SMART: peptidase S1 and S6 chymotrypsin/Hap~KEGG: GK19455 gene product from transcript GK19455- RA gene gene5933 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5869 Amir_5870 Amir_5870 Amir_5870 6909986 6911020 - peptidase M48 Ste24p PFAM: peptidase M48 Ste24p~KEGG: hypothetical protein gene gene5934 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5870 Amir_5871 Amir_5871 Amir_5871 6911101 6912030 + alpha/beta hydrolase fold protein PFAM: alpha/beta hydrolase fold~KEGG: abb:ABBFA_001367 alpha/beta hydrolase fold family protein gene gene5935 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5871 Amir_5872 Amir_5872 Amir_5872 6912027 6912692 + streptogramin A acetyl transferase KEGG: tgr:Tgr7_3169 streptogramin A acetyl transferase gene gene5936 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5872 Amir_5873 Amir_5873 Amir_5873 6912767 6915124 - ATP-dependent protease La KEGG: scl:sce5003 ATP-dependent protease La~TIGRFAM: ATP-dependent protease La~PFAM: AAA ATPase central domain protein%3B peptidase S16 lon domain protein%3B ATPase associated with various cellular activities AAA_5~SMART: peptidase S16 lon domain protein%3B AAA ATPase gene gene5937 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5873 Amir_5874 Amir_5874 Amir_5874 6915296 6916096 + protein of unknown function DUF574 PFAM: protein of unknown function DUF574~KEGG: scl:sce6070 hypothetical protein gene gene5938 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5874 Amir_5875 Amir_5875 Amir_5875 6916175 6918115 - Patatin PFAM: Patatin~KEGG: acp:A2cp1_0560 thermosensitive mutation transmembrane protein%2C SuhR gene gene5939 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5875 Amir_5876 Amir_5876 Amir_5876 6918272 6919069 - polysaccharide deacetylase PFAM: polysaccharide deacetylase~KEGG: aba:Acid345_4749 polysaccharide deacetylase gene gene5940 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5876 Amir_5877 Amir_5877 Amir_5877 6919203 6919730 + PEBP family protein PFAM: PEBP family protein~KEGG: eta:ETA_22690 hypothetical protein gene gene5941 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5877 Amir_5878 Amir_5878 Amir_5878 6919772 6921154 + mycothione reductase TIGRFAM: mycothione reductase~PFAM: pyridine nucleotide-disulphide oxidoreductase dimerization region%3B FAD-dependent pyridine nucleotide- disulphide oxidoreductase~KEGG: ade:Adeh_2206 FAD-dependent pyridine nucleotide-disulphide oxidoreductase gene gene5942 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5878 Amir_5879 Amir_5879 Amir_5879 6921251 6922588 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: rpi:Rpic_4548 major facilitator superfamily MFS_1 gene gene5943 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5879 Amir_5880 Amir_5880 Amir_5880 6922672 6923343 + GntR domain protein PFAM: GntR domain protein%3B regulatory protein GntR HTH~SMART: regulatory protein GntR HTH~KEGG: psa:PST_2058 probable transcriptional regulator gene gene5944 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5880 Amir_5881 Amir_5881 Amir_5881 6923525 6924439 - transcriptional regulator%2C LysR family PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: rlt:Rleg2_1625 transcriptional regulator%2C LysR family gene gene5945 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5881 Amir_5882 Amir_5882 Amir_5882 6924514 6925413 + protein of unknown function DUF6 transmembrane PFAM: protein of unknown function DUF6 transmembrane~KEGG: pae:PA4779 hypothetical protein gene gene5946 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5882 Amir_5883 Amir_5883 Amir_5883 6925421 6926950 - cobyric acid synthase CobQ TIGRFAM: cobyric acid synthase CobQ~PFAM: CobB/CobQ domain protein glutamine amidotransferase%3B SNO glutamine amidotransferase%3B Cobyrinic acid ac-diamide synthase~KEGG: aeh:Mlg_2812 adenosylcobyric acid synthase (glutamine-hydrolysing) gene gene5947 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5883 Amir_5884 Amir_5884 Amir_5884 6926997 6927704 + hypothetical protein KEGG: bbt:BBta_2719 hypothetical protein gene gene5948 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5884 Amir_5885 Amir_5885 Amir_5885 6927726 6928583 - methionine aminopeptidase%2C type I TIGRFAM: methionine aminopeptidase%2C type I~PFAM: peptidase M24~KEGG: afw:Anae109_2425 methionine aminopeptidase gene gene5949 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5885 Amir_5886 Amir_5886 Amir_5886 6928643 6930442 - penicillin-binding protein transpeptidase PFAM: penicillin-binding protein transpeptidase%3B NTF2 domain protein transpeptidase~KEGG: mxa:MXAN_7139 putative penicillin-binding protein gene gene5950 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5886 Amir_5887 Amir_5887 Amir_5887 6930460 6931314 - GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: mxa:MXAN_1267 hypothetical protein gene gene5951 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5887 Amir_5888 Amir_5888 Amir_5888 6931365 6932522 - 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase KEGG: dol:Dole_2059 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate synthase~TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4- diphosphate synthase~PFAM: IspG family protein gene gene5952 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5888 Amir_5889 Amir_5889 Amir_5889 6932550 6933761 - peptidase M50 PFAM: peptidase M50~KEGG: gbm:Gbem_2749 membrane-associated zinc metalloprotease gene gene5953 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5889 Amir_5890 Amir_5890 Amir_5890 6933764 6934984 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase KEGG: sal:Sala_1954 1-deoxy-D-xylulose 5-phosphate reductoisomerase~TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase~PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase domain protein gene gene5954 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5890 Amir_5891 Amir_5891 Amir_5891 6935143 6935409 + Transglycosylase-associated protein PFAM: Transglycosylase-associated protein~KEGG: csa:Csal_2587 transglycosylase-associated protein gene gene5955 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5891 Amir_5892 Amir_5892 Amir_5892 6935607 6936353 - hypothetical protein gene gene5956 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5892 Amir_5893 Amir_5893 Amir_5893 6936367 6937023 - two component transcriptional regulator%2C LuxR family PFAM: response regulator receiver%3B regulatory protein LuxR%3B Sigma-70 region 4 type 2~SMART: response regulator receiver%3B regulatory protein LuxR~KEGG: scl:sce5431 two-component system response regulator gene gene5957 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5893 Amir_5894 Amir_5894 Amir_5894 6937027 6938694 - histidine kinase PFAM: histidine kinase dimerization and phosphoacceptor region%3B ATP-binding region ATPase domain protein~KEGG: xcb:XC_0113 two-component system sensor protein gene gene5958 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5894 Amir_5895 Amir_5895 Amir_5895 6938735 6939562 - Ornithine carbamoyltransferase PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: met:M446_6381 ornithine carbamoyltransferase gene gene5959 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5895 Amir_5896 Amir_5896 Amir_5896 6939559 6940407 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: sus:Acid_2368 binding-protein-dependent transport systems inner membrane component gene gene5960 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5896 Amir_5897 Amir_5897 Amir_5897 6940407 6941558 - extracellular solute-binding protein family 1 PFAM: extracellular solute-binding protein family 1~KEGG: cak:Caul_3951 extracellular solute-binding protein gene gene5961 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5897 Amir_5898 Amir_5898 Amir_5898 6941551 6942666 - spermidine/putrescine ABC transporter ATPase subunit KEGG: pap:PSPA7_1534 polyamine transport protein PotA~TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit~PFAM: ABC transporter related%3B TOBE domain protein%3B Transport-associated OB domain protein~SMART: AAA ATPase gene gene5962 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5898 Amir_5899 Amir_5899 Amir_5899 6942913 6943170 + hypothetical protein gene gene5963 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5899 Amir_5900 Amir_5900 Amir_5900 6943325 6944755 - serine/threonine protein kinase PFAM: Serine/threonine protein kinase-related%3B tyrosine protein kinase~SMART: serine/threonine protein kinase%3B tyrosine protein kinase~KEGG: afw:Anae109_0235 protein kinase gene gene5964 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5900 Amir_5901 Amir_5901 Amir_5901 6944835 6945323 + hypothetical protein gene gene5965 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5901 Amir_5902 Amir_5902 Amir_5902 6945530 6946636 - radical SAM enzyme%2C Cfr family KEGG: afw:Anae109_2180 radical SAM protein~TIGRFAM: radical SAM enzyme%2C Cfr family~PFAM: Radical SAM domain protein~SMART: Elongator protein 3/MiaB/NifB gene gene5966 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5902 Amir_5903 Amir_5903 Amir_5903 6946747 6947697 + transcriptional regulator%2C PadR-like family PFAM: transcriptional regulator PadR family protein~KEGG: scl:sce3089 PadR family transcriptional regulator gene gene5967 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5903 Amir_5904 Amir_5904 Amir_5904 6947769 6948722 - aldo/keto reductase PFAM: aldo/keto reductase~KEGG: rlt:Rleg2_1253 aldo/keto reductase gene gene5968 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5904 Amir_5905 Amir_5905 Amir_5905 6948757 6949494 - Methyltransferase type 11 PFAM: Methyltransferase type 11%3B Methyltransferase type 12~KEGG: acp:A2cp1_3874 methyltransferase type 11 gene gene5969 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5905 Amir_5906 Amir_5906 Amir_5906 6949556 6950371 + Glyoxalase/bleomycin resistance protein/dioxygenase PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase~KEGG: sse:Ssed_0208 glyoxalase/bleomycin resistance protein/dioxygenase gene gene5970 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5906 Amir_5907 Amir_5907 Amir_5907 6950442 6951287 - phosphatidate cytidylyltransferase PFAM: phosphatidate cytidylyltransferase~KEGG: mgm:Mmc1_1845 phosphatidate cytidylyltransferase gene gene5971 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5907 Amir_5908 Amir_5908 Amir_5908 6951375 6951932 - ribosome recycling factor TIGRFAM: ribosome recycling factor~PFAM: ribosome recycling factor~KEGG: bha:BH2424 ribosome recycling factor gene gene5972 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5908 Amir_5909 Amir_5909 Amir_5909 6951978 6952769 - uridylate kinase TIGRFAM: uridylate kinase~PFAM: aspartate/glutamate/uridylate kinase~KEGG: gme:Gmet_1252 uridylate kinase gene gene5973 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5909 Amir_5910 Amir_5910 Amir_5910 6952852 6953667 - translation elongation factor Ts TIGRFAM: translation elongation factor Ts~PFAM: Translation elongation factor EFTs/EF1B dimerisation%3B ubiquitin-associated- domain-containing protein~KEGG: bmv:BMASAVP1_A2055 elongation factor Ts gene gene5974 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5910 Amir_5911 Amir_5911 Amir_5911 6953749 6954663 - ribosomal protein S2 TIGRFAM: ribosomal protein S2~PFAM: ribosomal protein S2~KEGG: bha:BH2427 30S ribosomal protein S2 gene gene5975 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5911 Amir_5912 Amir_5912 Amir_5912 6955003 6955998 + Peptidase M23 PFAM: Peptidase M23~KEGG: fibrocystin-L-like protein gene gene5976 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5912 Amir_5913 Amir_5913 Amir_5913 6956439 6957257 - RNA polymerase%2C sigma 28 subunit%2C FliA/WhiG KEGG: mgm:Mmc1_3037 RNA polymerase%2C sigma 28 subunit%2C FliA/WhiG family~TIGRFAM: RNA polymerase sigma factor%2C FliA/WhiG family%3B RNA polymerase sigma factor%2C sigma-70 family~PFAM: sigma-70 region 2 domain protein%3B Sigma-70 region 4 type 2%3B sigma-70 region 3 domain protein%3B sigma- 70 region 4 domain protein gene gene5977 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5913 Amir_5914 Amir_5914 Amir_5914 6958093 6959070 - integrase family protein PFAM: integrase family protein%3B integrase domain protein SAM domain protein~KEGG: afw:Anae109_2689 tyrosine recombinase XerC gene gene5978 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5914 Amir_5915 Amir_5915 Amir_5915 6959104 6960270 - pseudogene gene5979 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5915 Amir_5916 Amir_5916 Amir_5916 6960896 6962416 - Mg chelatase%2C subunit ChlI KEGG: ank:AnaeK_3688 Mg chelatase%2C subunit ChlI~TIGRFAM: Mg chelatase%2C subunit ChlI~PFAM: magnesium chelatase ChlI subunit%3B ATPase associated with various cellular activities AAA_5~SMART: AAA ATPase gene gene5980 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5916 Amir_5917 Amir_5917 Amir_5917 6962416 6962769 - protein of unknown function UPF0102 PFAM: protein of unknown function UPF0102~KEGG: dps:DP2807 hypothetical protein gene gene5981 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5917 Amir_5918 Amir_5918 Amir_5918 6963062 6963385 - hypothetical protein gene gene5982 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5918 Amir_5919 Amir_5919 Amir_5919 6963405 6964181 - Ribonuclease H PFAM: ribonuclease HII/HIII~KEGG: ribonuclease H gene gene5983 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5919 Amir_5920 Amir_5920 Amir_5920 6964191 6965090 - signal peptidase I TIGRFAM: signal peptidase I~PFAM: peptidase S24 and S26 domain protein~KEGG: TPP1%3B chloroplast thylakoid processing peptidase%3B K03100 signal peptidase I gene gene5984 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5920 Amir_5921 Amir_5921 Amir_5921 6965095 6965961 - signal peptidase I KEGG: signal peptidase%2C putative%3B K03100 signal peptidase I~TIGRFAM: signal peptidase I~PFAM: peptidase S24 and S26 domain protein gene gene5985 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5921 Amir_5922 Amir_5922 Amir_5922 6966071 6966430 - ribosomal protein L19 TIGRFAM: ribosomal protein L19~PFAM: ribosomal protein L19~KEGG: bha:BH2478 50S ribosomal protein L19 gene gene5986 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5922 Amir_5923 Amir_5923 Amir_5923 6966602 6967342 - tRNA (guanine-N1)-methyltransferase KEGG: glo:Glov_2453 tRNA (guanine-N1)- methyltransferase~TIGRFAM: tRNA (guanine-N1)-methyltransferase~PFAM: tRNA (guanine-N1-)-methyltransferase gene gene5987 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5923 Amir_5924 Amir_5924 Amir_5924 6967332 6967850 - 16S rRNA processing protein RimM TIGRFAM: 16S rRNA processing protein RimM~PFAM: RimM protein%3B PRC-barrel domain protein~KEGG: dds:Ddes_1801 16S rRNA processing protein RimM gene gene5988 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5924 Amir_5925 Amir_5925 Amir_5925 6967857 6968096 - conserved hypothetical protein KEGG: bha:BH2482 hypothetical protein gene gene5989 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5925 Amir_5926 Amir_5926 Amir_5926 6968093 6968530 - ribosomal protein S16 TIGRFAM: ribosomal protein S16~PFAM: ribosomal protein S16~KEGG: swi:Swit_2657 30S ribosomal protein S16 gene gene5990 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5926 Amir_5927 Amir_5927 Amir_5927 6968684 6969442 - LamB/YcsF family protein PFAM: LamB/YcsF family protein~KEGG: pst:PSPTO_5378 hypothetical protein gene gene5991 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5927 Amir_5928 Amir_5928 Amir_5928 6969439 6970155 - Abortive infection protein PFAM: Abortive infection protein~KEGG: pcr:Pcryo_0794 abortive infection protein gene gene5992 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5928 Amir_5929 Amir_5929 Amir_5929 6970955 6972025 - amidohydrolase PFAM: amidohydrolase%3B Amidohydrolase 3~KEGG: pzu:PHZ_c3063 Xaa-Pro dipeptidase gene gene5993 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5929 Amir_5930 Amir_5930 Amir_5930 6972022 6973578 - signal recognition particle protein KEGG: dds:Ddes_1804 signal recognition particle protein~TIGRFAM: signal recognition particle protein~PFAM: GTP-binding signal recognition particle SRP54 G- domain%3B Signal peptide binding (SRP54) M- domain protein%3B GTP-binding signal recognition particle SRP54 helical bundle~SMART: AAA ATPase gene gene5994 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5930 Amir_5931 Amir_5931 Amir_5931 6973895 6974443 - hypothetical protein KEGG: mlo:mll6593 hypothetical protein gene gene5995 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5931 Amir_5932 Amir_5932 Amir_5932 6974903 6977266 - UTP-GlnB uridylyltransferase%2C GlnD KEGG: rce:RC1_2592 protein-P-II uridylyltransferase~TIGRFAM: protein-P-II uridylyltransferase~PFAM: GlnD PII-uridylyltransferase%3B metal-dependent phosphohydrolase HD sub domain%3B amino acid-binding ACT domain protein~SMART: metal-dependent phosphohydrolase HD region gene gene5996 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5932 Amir_5933 Amir_5933 Amir_5933 6977287 6977625 - nitrogen regulatory protein P-II PFAM: nitrogen regulatory protein P-II~KEGG: cja:CJA_3390 nitrogen regulatory protein P-II gene gene5997 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5933 Amir_5934 Amir_5934 Amir_5934 6977622 6978965 - ammonium transporter TIGRFAM: ammonium transporter~PFAM: Rh family protein/ammonium transporter~KEGG: pca:Pcar_2589 ammonium transporter gene gene5998 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5934 Amir_5935 Amir_5935 Amir_5935 6979450 6981006 - TAP domain protein PFAM: TAP domain protein%3B alpha/beta hydrolase fold~KEGG: hypothetical protein gene gene5999 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5935 Amir_5936 Amir_5936 Amir_5936 6981139 6982134 - allantoicase KEGG: scl:sce5877 putative bifunctional allantoicase/OHCU decarboxylase~TIGRFAM: allantoicase~PFAM: Allantoicase region gene gene6000 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5936 Amir_5937 Amir_5937 Amir_5937 6982131 6983840 - allantoinase KEGG: scl:sce5876 allantoinase~TIGRFAM: allantoinase~PFAM: amidohydrolase%3B Amidohydrolase 3 gene gene6001 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5937 Amir_5938 Amir_5938 Amir_5938 6984153 6984647 + OHCU decarboxylase TIGRFAM: OHCU decarboxylase~KEGG: spe:Spro_0938 putative urate oxidase%2C N- terminal gene gene6002 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5938 Amir_5939 Amir_5939 Amir_5939 6984682 6985563 + urate oxidase KEGG: scl:sce4023 putative uricase~TIGRFAM: urate oxidase~PFAM: Uricase gene gene6003 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5939 Amir_5940 Amir_5940 Amir_5940 6985594 6986049 - hypothetical protein gene gene6004 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5940 Amir_5941 Amir_5941 Amir_5941 6986140 6987345 - conserved hypothetical protein KEGG: scl:sce5882 hypothetical protein gene gene6005 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5941 Amir_5942 Amir_5942 Amir_5942 6987347 6988888 - malate synthase A KEGG: mxa:MXAN_6441 malate synthase~TIGRFAM: malate synthase A~PFAM: malate synthase gene gene6006 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5942 Amir_5943 Amir_5943 Amir_5943 6988978 6989751 + transcriptional regulator%2C IclR family PFAM: regulatory protein IclR%3B Transcriptional regulator IclR~SMART: regulatory protein IclR~KEGG: bid:Bind_3440 IclR family transcriptional regulator gene gene6007 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5943 Amir_5944 Amir_5944 Amir_5944 6989795 6990187 + hypothetical protein gene gene6008 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5944 Amir_5945 Amir_5945 Amir_5945 6990300 6991772 - signal recognition particle-docking protein FtsY KEGG: pmy:Pmen_4175 signal recognition particle- docking protein FtsY~TIGRFAM: signal recognition particle-docking protein FtsY~PFAM: GTP-binding signal recognition particle SRP54 G- domain%3B GTP-binding signal recognition particle SRP54 helical bundle~SMART: AAA ATPase gene gene6009 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5945 Amir_5946 Amir_5946 Amir_5946 6991893 6993017 + protein of unknown function UPF0075 PFAM: protein of unknown function UPF0075~KEGG: bav:BAV2965 hypothetical protein gene gene6010 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5946 Amir_5947 Amir_5947 Amir_5947 6993004 6994533 + Na+/solute symporter PFAM: Na+/solute symporter~KEGG: gdi:GDI1156 putative sodium cotransporter gene gene6011 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5947 Amir_5948 Amir_5948 Amir_5948 6994874 6995812 - GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: pzu:PHZ_c1335 L-2%2C4-diaminobutyric acid acetyltransferase gene gene6012 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5948 Amir_5949 Amir_5949 Amir_5949 6995854 6996486 + hypothetical protein gene gene6013 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5949 Amir_5950 Amir_5950 Amir_5950 6996509 6996859 + hypothetical protein gene gene6014 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5950 Amir_5951 Amir_5951 Amir_5951 6996950 6997684 + phospholipid/glycerol acyltransferase PFAM: phospholipid/glycerol acyltransferase~SMART: phospholipid/glycerol acyltransferase~KEGG: gur:Gura_4298 phospholipid/glycerol acyltransferase gene gene6015 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5951 Amir_5952 Amir_5952 Amir_5952 6997724 7001308 - chromosome segregation protein SMC TIGRFAM: chromosome segregation protein SMC~PFAM: SMC domain protein%3B SMCs flexible hinge domain protein~KEGG: bha:BH2487 chromosome segregation SMC protein gene gene6016 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5952 Amir_5953 Amir_5953 Amir_5953 7001349 7002161 - putative transmembrane anti-sigma factor KEGG: bps:BPSL1109 hypothetical protein gene gene6017 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5953 Amir_5954 Amir_5954 Amir_5954 7002161 7002649 - RNA polymerase%2C sigma-24 subunit%2C ECF subfamily TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family~PFAM: sigma-70 region 4 domain protein%3B sigma-70 region 2 domain protein%3B Sigma-70 region 4 type 2~KEGG: rpb:RPB_3549 RNA polymerase sigma factor gene gene6018 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5954 Amir_5955 Amir_5955 Amir_5955 7002683 7002970 - acylphosphatase PFAM: acylphosphatase~KEGG: met:M446_0372 acylphosphatase gene gene6019 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5955 Amir_5956 Amir_5956 Amir_5956 7002996 7003676 + SCP-like extracellular PFAM: SCP-like extracellular~KEGG: bcy:Bcer98_1016 hypothetical protein gene gene6020 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5956 Amir_5957 Amir_5957 Amir_5957 7003708 7004235 - hypothetical protein gene gene6021 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5957 Amir_5958 Amir_5958 Amir_5958 7004406 7004897 + hypothetical protein KEGG: hypothetical protein LOC763622 gene gene6022 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5958 Amir_5959 Amir_5959 Amir_5959 7005414 7006535 + FAD dependent oxidoreductase PFAM: FAD dependent oxidoreductase%3B FAD-dependent pyridine nucleotide-disulphide oxidoreductase~KEGG: bja:blr2205 putative dehydrogenase gene gene6023 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5959 Amir_5960 Amir_5960 Amir_5960 7006648 7007328 - two component transcriptional regulator%2C winged helix family PFAM: response regulator receiver%3B transcriptional regulator domain protein~SMART: response regulator receiver~KEGG: set:SEN0666 KDP operon transcriptional regulatory protein gene gene6024 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5960 Amir_5961 Amir_5961 Amir_5961 7007648 7008076 + transcriptional regulator%2C MarR family PFAM: regulatory protein MarR~SMART: regulatory protein MarR~KEGG: bmj:BMULJ_04432 MarR family transcriptional regulator gene gene6025 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5961 Amir_5962 Amir_5962 Amir_5962 7008410 7009285 - formamidopyrimidine-DNA glycosylase KEGG: mca:MCA3072 formamidopyrimidine-DNA glycosylase~TIGRFAM: formamidopyrimidine-DNA glycosylase~PFAM: Formamidopyrimidine-DNA glycosylase catalytic domain protein%3B zinc finger Fpg domain protein%3B DNA glycosylase/AP lyase%2C H2TH DNA-binding gene gene6026 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5962 Amir_5963 Amir_5963 Amir_5963 7009295 7009546 - hypothetical protein gene gene6027 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5963 Amir_5964 Amir_5964 Amir_5964 7009554 7010357 - ribonuclease III KEGG: sat:SYN_00796 ribonuclease III~TIGRFAM: ribonuclease III~PFAM: ribonuclease III%3B double-stranded RNA binding domain protein~SMART: ribonuclease III%3B double-stranded RNA binding domain protein gene gene6028 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5964 Amir_5965 Amir_5965 Amir_5965 7010385 7010567 - ribosomal protein L32 TIGRFAM: ribosomal protein L32~PFAM: ribosomal L32p protein~KEGG: mgm:Mmc1_1643 LSU ribosomal protein L32P gene gene6029 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5965 Amir_5966 Amir_5966 Amir_5966 7010570 7011016 - protein of unknown function DUF177 PFAM: protein of unknown function DUF177~KEGG: afw:Anae109_2742 hypothetical protein gene gene6030 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5966 Amir_5967 Amir_5967 Amir_5967 7011277 7011993 - putative cell division initiation protein KEGG: hypothetical protein%3B K03497 chromosome partitioning protein%2C ParB family gene gene6031 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5967 Amir_5968 Amir_5968 Amir_5968 7012129 7012611 - pantetheine-phosphate adenylyltransferase KEGG: bha:BH2589 lipopolysaccharide core biosynthesis~TIGRFAM: pantetheine-phosphate adenylyltransferase%3B cytidyltransferase-related domain protein~PFAM: cytidylyltransferase gene gene6032 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5968 Amir_5969 Amir_5969 Amir_5969 7012664 7013230 - methyltransferase TIGRFAM: methyltransferase~PFAM: Protein of unknown function methylase putative~KEGG: scl:sce8059 putative methylase gene gene6033 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5969 Amir_5970 Amir_5970 Amir_5970 7013306 7014388 - conserved hypothetical protein KEGG: mxa:MXAN_6257 hypothetical protein gene gene6034 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5970 Amir_5971 Amir_5971 Amir_5971 7014450 7014893 - hypothetical protein gene gene6035 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5971 Amir_5972 Amir_5972 Amir_5972 7014878 7015225 - hypothetical protein gene gene6036 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5972 Amir_5973 Amir_5973 Amir_5973 7015428 7018805 - pyruvate carboxylase TIGRFAM: pyruvate carboxylase~PFAM: Carbamoyl-phosphate synthase L chain ATP- binding%3B biotin carboxylase domain protein%3B pyruvate carboxyltransferase%3B Conserved carboxylase region%3B biotin/lipoyl attachment domain-containing protein%3B Carbamoyl-phosphate synthetase large chain domain protein~KEGG: afw:Anae109_2995 pyruvate carboxylase gene gene6037 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5973 Amir_5974 Amir_5974 Amir_5974 7019075 7020478 + hypothetical protein KEGG: hypothetical protein gene gene6038 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5974 Amir_5975 Amir_5975 Amir_5975 7020612 7021439 - hypothetical protein gene gene6039 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5975 Amir_5976 Amir_5976 Amir_5976 7021562 7022455 + pseudogene gene6040 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5976 Amir_5977 Amir_5977 Amir_5977 7022476 7024677 - ATP-dependent DNA helicase RecG KEGG: bba:Bd2324 ATP-dependent DNA helicase RecG~TIGRFAM: ATP-dependent DNA helicase RecG~PFAM: DEAD/DEAH box helicase domain protein%3B helicase domain protein%3B nucleic acid binding OB-fold tRNA/helicase-type~SMART: DEAD-like helicase%3B helicase domain protein gene gene6041 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5977 Amir_5978 Amir_5978 Amir_5978 7024732 7026369 - Dak phosphatase PFAM: Dak phosphatase~KEGG: bsu:BSU15840 hypothetical protein gene gene6042 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5978 Amir_5979 Amir_5979 Amir_5979 7026517 7026708 + ribosomal protein L28 TIGRFAM: ribosomal protein L28~PFAM: ribosomal protein L28~KEGG: aba:Acid345_0165 LSU ribosomal protein L28P gene gene6043 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5979 Amir_5980 Amir_5980 Amir_5980 7026929 7027807 - NAD-dependent epimerase/dehydratase PFAM: NAD-dependent epimerase/dehydratase%3B NmrA family protein%3B Male sterility domain%3B 3-beta hydroxysteroid dehydrogenase/isomerase%3B dTDP-4- dehydrorhamnose reductase~KEGG: ade:Adeh_4303 NAD-dependent epimerase/dehydratase gene gene6044 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5980 Amir_5981 Amir_5981 Amir_5981 7027887 7028381 + transcriptional regulator%2C MarR family PFAM: regulatory protein MarR~SMART: regulatory protein MarR~KEGG: acp:A2cp1_4259 transcriptional regulator%2C MarR family gene gene6045 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5981 Amir_5982 Amir_5982 Amir_5982 7028478 7029152 - Uracil-DNA glycosylase superfamily PFAM: Uracil-DNA glycosylase superfamily~KEGG: mxa:MXAN_0760 uracil-DNA glycosylase gene gene6046 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5982 Amir_5983 Amir_5983 Amir_5983 7029167 7029685 - transferase family protein KEGG: sil:SPO1946 transferase family protein gene gene6047 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5983 Amir_5984 Amir_5984 Amir_5984 7029708 7030223 - GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: hypothetical protein gene gene6048 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5984 Amir_5985 Amir_5985 Amir_5985 7030249 7031214 - thiamine-monophosphate kinase KEGG: gur:Gura_0692 thiamine-monophosphate kinase~TIGRFAM: thiamine-monophosphate kinase~PFAM: AIR synthase related protein%3B AIR synthase related protein domain protein gene gene6049 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5985 Amir_5986 Amir_5986 Amir_5986 7031312 7031545 + transcriptional regulator%2C AsnC family PFAM: regulatory protein AsnC/Lrp family~KEGG: pzu:PHZ_c3044 transcriptional regulator%2C Lrp/AsnC family gene gene6050 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5986 Amir_5987 Amir_5987 Amir_5987 7031614 7032156 + hypothetical protein gene gene6051 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5987 Amir_5988 Amir_5988 Amir_5988 7032227 7033294 - D-alanine/D-alanine ligase KEGG: cvi:CV_2472 D-alanyl-alanine synthetase A~TIGRFAM: D-alanine/D-alanine ligase~PFAM: D-alanine--D-alanine ligase domain protein%3B ATP-dependent carboxylate-amine ligase domain protein ATP- grasp gene gene6052 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5988 Amir_5989 Amir_5989 Amir_5989 7033891 7034358 + cysteine dioxygenase type I PFAM: cysteine dioxygenase type I%3B Cupin 2 conserved barrel domain protein~KEGG: mxa:MXAN_0927 cysteine dioxygenase%2C type I gene gene6053 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5989 Amir_5990 Amir_5990 Amir_5990 7034433 7035080 - conserved hypothetical protein KEGG: aba:Acid345_2785 hypothetical protein gene gene6054 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5990 Amir_5991 Amir_5991 Amir_5991 7035149 7036519 + transcriptional regulator%2C GntR family with aminotransferase domain PFAM: regulatory protein GntR HTH%3B aminotransferase class I and II~SMART: regulatory protein GntR HTH~KEGG: ade:Adeh_2233 GntR family transcriptional regulator gene gene6055 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5991 Amir_5992 Amir_5992 Amir_5992 7036769 7037167 + hypothetical protein gene gene6056 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5992 Amir_5993 Amir_5993 Amir_5993 7037214 7037408 - protein of unknown function DUF397 PFAM: protein of unknown function DUF397 gene gene6057 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5993 Amir_5994 Amir_5994 Amir_5994 7037398 7038243 - hypothetical protein gene gene6058 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5994 Amir_5995 Amir_5995 Amir_5995 7038481 7038954 + hypothetical protein KEGG: azc:AZC_3655 hypothetical protein gene gene6059 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5995 Amir_5996 Amir_5996 Amir_5996 7038951 7039358 + hypothetical protein gene gene6060 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5996 Amir_5997 Amir_5997 Amir_5997 7039404 7040531 - Cys/Met metabolism pyridoxal-phosphate-dependent protein PFAM: Cys/Met metabolism pyridoxal-phosphate- dependent protein%3B aromatic amino acid beta-eliminating lyase/threonine aldolase~KEGG: sil:SPO3344 cystathionine gamma-lyase gene gene6061 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5997 Amir_5998 Amir_5998 Amir_5998 7040531 7041532 - Glycerol-3-phosphate dehydrogenase (NAD(P)(+)) PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein%3B Ketopantoate reductase ApbA/PanE domain protein%3B NADP oxidoreductase coenzyme F420-dependent~KEGG: ade:Adeh_0396 glycerol-3-phosphate dehydrogenase (NAD(P)+) gene gene6062 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5998 Amir_5999 Amir_5999 Amir_5999 7041534 7042235 - phospholipid/glycerol acyltransferase PFAM: phospholipid/glycerol acyltransferase~SMART: phospholipid/glycerol acyltransferase~KEGG: ank:AnaeK_4035 1-acyl-sn-glycerol-3-phosphate acyltransferase gene gene6063 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_5999 Amir_6000 Amir_6000 Amir_6000 7042317 7042931 + conserved hypothetical protein KEGG: pzu:PHZ_c2537 hypothetical protein gene gene6064 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6000 Amir_6001 Amir_6001 Amir_6001 7042904 7043218 + hypothetical protein KEGG: hypothetical protein gene gene6065 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6001 Amir_6002 Amir_6002 Amir_6002 7043440 7045578 + Polyphosphate kinase PFAM: Polyphosphate kinase~KEGG: mxa:MXAN_0056 polyphosphate kinase gene gene6066 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6002 Amir_6003 Amir_6003 Amir_6003 7045582 7046526 + NUDIX hydrolase PFAM: NUDIX hydrolase%3B Phosphoglycerate mutase~KEGG: bja:bll6630 hypothetical protein gene gene6067 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6003 Amir_6004 Amir_6004 Amir_6004 7048316 7049173 - histone family protein DNA-binding protein PFAM: histone family protein DNA-binding protein~SMART: histone family protein DNA-binding protein~KEGG: hypothetical protein LOC679057 gene gene6068 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6004 Amir_6005 Amir_6005 Amir_6005 7049381 7049983 - 3-isopropylmalate dehydratase%2C small subunit KEGG: aba:Acid345_2915 3-isopropylmalate dehydratase%2C small subunit~TIGRFAM: 3-isopropylmalate dehydratase%2C small subunit~PFAM: aconitate hydratase domain protein gene gene6069 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6005 Amir_6006 Amir_6006 Amir_6006 7049998 7051416 - 3-isopropylmalate dehydratase%2C large subunit KEGG: aba:Acid345_2916 isopropylmalate isomerase large subunit~TIGRFAM: 3-isopropylmalate dehydratase%2C large subunit~PFAM: aconitate hydratase domain protein gene gene6070 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6006 Amir_6007 Amir_6007 Amir_6007 7051495 7052196 + transcriptional regulator%2C IclR family PFAM: Transcriptional regulator IclR%3B regulatory protein IclR~SMART: regulatory protein IclR~KEGG: cti:RALTA_B1947 putative transcriptional regulator%2C IclR family gene gene6071 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6007 Amir_6008 Amir_6008 Amir_6008 7053052 7053735 - HAD-superfamily hydrolase%2C subfamily IA%2C variant 1 TIGRFAM: HAD-superfamily hydrolase%2C subfamily IA%2C variant 1~PFAM: Haloacid dehalogenase domain protein hydrolase~KEGG: bha:BH0473 hypothetical protein gene gene6075 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6008 Amir_6009 Amir_6009 Amir_6009 7053894 7055384 - glutamyl-tRNA synthetase TIGRFAM: glutamyl-tRNA synthetase~PFAM: glutamyl-tRNA synthetase class Ic~KEGG: bcy:Bcer98_0082 glutamyl-tRNA synthetase gene gene6076 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6009 Amir_6010 Amir_6010 Amir_6010 7055473 7056705 + monooxygenase FAD-binding PFAM: monooxygenase FAD-binding~KEGG: mrd:Mrad2831_2174 monooxygenase FAD-binding gene gene6077 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6010 Amir_6011 Amir_6011 Amir_6011 7056931 7057701 - 5-oxopent-3-ene-1%2C2%2C5-tricarboxylatedecarboxylas e PFAM: fumarylacetoacetate (FAA) hydrolase~KEGG: scl:sce2870 fumarylacetoacetase gene gene6078 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6011 Amir_6012 Amir_6012 Amir_6012 7057758 7058411 + hypothetical protein KEGG: hypothetical protein gene gene6079 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6012 Amir_6013 Amir_6013 Amir_6013 7058458 7060071 - 2-isopropylmalate synthase/homocitrate synthase family protein TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein~PFAM: LeuA allosteric (dimerisation) domain%3B pyruvate carboxyltransferase~KEGG: scl:sce3734 putative alpha- isopropylmalate/homocitrate synthase family transferase gene gene6080 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6013 Amir_6014 Amir_6014 Amir_6014 7060690 7061727 - 3-isopropylmalate dehydrogenase PFAM: isocitrate/isopropylmalate dehydrogenase~KEGG: sfu:Sfum_3031 isocitrate/isopropylmalate dehydrogenase gene gene6081 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6014 Amir_6015 Amir_6015 Amir_6015 7062011 7065289 - peptidase S8 and S53 subtilisin kexin sedolisin PFAM: peptidase S8 and S53 subtilisin kexin sedolisin~KEGG: glo:Glov_1721 peptidase S8 and S53 subtilisin kexin sedolisin gene gene6082 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6015 Amir_6016 Amir_6016 Amir_6016 7065514 7065639 + hypothetical protein gene gene6083 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6016 Amir_6017 Amir_6017 Amir_6017 7065728 7067326 - D-3-phosphoglycerate dehydrogenase KEGG: atc:AGR_L_2264 D-3-phosphoglycerate dehydrogenase~TIGRFAM: D-3-phosphoglycerate dehydrogenase~PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding%3B D-isomer specific 2-hydroxyacid dehydrogenase catalytic region%3B amino acid-binding ACT domain protein gene gene6084 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6017 Amir_6018 Amir_6018 Amir_6018 7067834 7068103 - protein of unknown function DUF397 PFAM: protein of unknown function DUF397 gene gene6085 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6018 Amir_6019 Amir_6019 Amir_6019 7068216 7069229 - ketol-acid reductoisomerase KEGG: afw:Anae109_1879 ketol-acid reductoisomerase~TIGRFAM: ketol-acid reductoisomerase~PFAM: Acetohydroxy acid isomeroreductase catalytic domain protein%3B acetohydroxy acid isomeroreductase gene gene6086 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6019 Amir_6020 Amir_6020 Amir_6020 7069289 7069795 - acetolactate synthase%2C small subunit TIGRFAM: acetolactate synthase%2C small subunit~PFAM: amino acid-binding ACT domain protein~KEGG: gur:Gura_3719 acetolactate synthase 3 regulatory subunit gene gene6087 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6020 Amir_6021 Amir_6021 Amir_6021 7069844 7071679 - acetolactate synthase%2C large subunit%2C biosynthetic type TIGRFAM: acetolactate synthase%2C large subunit%2C biosynthetic type~PFAM: thiamine pyrophosphate protein TPP binding domain protein%3B thiamine pyrophosphate protein domain protein TPP-binding%3B thiamine pyrophosphate protein central region~KEGG: ade:Adeh_1978 acetolactate synthase%2C large subunit gene gene6088 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6021 Amir_6022 Amir_6022 Amir_6022 7071914 7072594 + hypothetical protein KEGG: mucin-associated surface protein (MASP) gene gene6089 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6022 Amir_6023 Amir_6023 Amir_6023 7072730 7073149 + Vitamin K epoxide reductase PFAM: Vitamin K epoxide reductase~SMART: Vitamin K epoxide reductase~KEGG: hypothetical protein gene gene6090 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6023 Amir_6024 Amir_6024 Amir_6024 7073265 7075109 + dihydroxy-acid dehydratase KEGG: msl:Msil_3234 dihydroxy-acid dehydratase~TIGRFAM: dihydroxy-acid dehydratase~PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase gene gene6091 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6024 Amir_6025 Amir_6025 Amir_6025 7075280 7076131 - DoxX family protein PFAM: DoxX family protein~KEGG: slo:Shew_2277 DoxX family protein gene gene6092 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6025 Amir_6026 Amir_6026 Amir_6026 7076321 7077031 - hypothetical protein KEGG: hypothetical protein gene gene6093 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6026 Amir_6027 Amir_6027 Amir_6027 7077291 7078169 - D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding~KEGG: hypothetical protein gene gene6094 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6027 Amir_6028 Amir_6028 Amir_6028 7078195 7079148 + alpha/beta hydrolase fold protein PFAM: alpha/beta hydrolase fold~KEGG: afw:Anae109_2061 alpha/beta hydrolase fold gene gene6095 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6028 Amir_6029 Amir_6029 Amir_6029 7079181 7080338 + Glucose/sorbosone dehydrogenase-like protein KEGG: bha:BH2090 glucose dehydrogenase-B gene gene6096 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6029 Amir_6030 Amir_6030 Amir_6030 7080370 7083012 - TPR repeat-containing protein PFAM: TPR repeat-containing protein%3B Tetratricopeptide TPR_4~SMART: Tetratricopeptide domain protein~KEGG: sus:Acid_3454 tetratricopeptide TPR_4 gene gene6097 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6030 Amir_6031 Amir_6031 Amir_6031 7083104 7083466 - clx-1%3B COllagen sequence X-hybridizing KEGG: clx-1%3B COllagen sequence X-hybridizing gene gene6098 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6031 Amir_6032 Amir_6032 Amir_6032 7083949 7085454 - glutamyl-tRNA(Gln) amidotransferase%2C B subunit TIGRFAM: glutamyl-tRNA(Gln) amidotransferase%2C B subunit~PFAM: GatB region%3B GatB/Yqey domain protein%3B GatB central domain protein~KEGG: sus:Acid_7720 aspartyl/glutamyl-tRNA amidotransferase subunit B gene gene6099 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6032 Amir_6033 Amir_6033 Amir_6033 7085451 7085642 - hypothetical protein gene gene6100 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6033 Amir_6034 Amir_6034 Amir_6034 7085639 7087159 - glutamyl-tRNA(Gln) amidotransferase%2C A subunit KEGG: mxa:MXAN_1463 glutamyl-tRNA(Gln) amidotransferase%2C A subunit~TIGRFAM: glutamyl-tRNA(Gln) amidotransferase%2C A subunit~PFAM: Amidase gene gene6101 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6034 Amir_6035 Amir_6035 Amir_6035 7087156 7087455 - glutamyl-tRNA(Gln) amidotransferase%2C C subunit TIGRFAM: glutamyl-tRNA(Gln) amidotransferase%2C C subunit~PFAM: Glu-tRNAGln amidotransferase C subunit~KEGG: gsu:GSU3383 glutamyl-tRNA(Gln) amidotransferase%2C C subunit gene gene6102 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6035 Amir_6036 Amir_6036 Amir_6036 7087720 7088367 + amino acid-binding ACT domain protein PFAM: amino acid-binding ACT domain protein~KEGG: bsu:BSU23550 malolactic enzyme gene gene6103 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6036 Amir_6037 Amir_6037 Amir_6037 7088486 7088974 + zinc finger SWIM domain protein PFAM: zinc finger SWIM domain protein~KEGG: mgm:Mmc1_2013 zinc finger%2C SWIM domain protein gene gene6104 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6037 Amir_6038 Amir_6038 Amir_6038 7089303 7091753 - DNA ligase%2C NAD-dependent KEGG: mca:MCA2438 DNA ligase%2C NAD-dependent~TIGRFAM: DNA ligase%2C NAD-dependent~PFAM: NAD-dependent DNA ligase adenylation%3B BRCT domain protein%3B zinc-finger NAD-dependent DNA ligase C4- type%3B NAD-dependent DNA ligase OB-fold~SMART: NAD-dependent DNA ligase%3B BRCT domain protein gene gene6105 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6038 Amir_6039 Amir_6039 Amir_6039 7091834 7092481 - hypothetical protein gene gene6106 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6039 Amir_6040 Amir_6040 Amir_6040 7092494 7093381 - transcriptional regulator%2C LysR family PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: acr:Acry_2159 LysR family transcriptional regulator gene gene6107 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6040 Amir_6041 Amir_6041 Amir_6041 7093393 7094259 + conserved hypothetical protein PFAM: conserved hypothetical protein~KEGG: xau:Xaut_2089 hypothetical protein gene gene6108 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6041 Amir_6042 Amir_6042 Amir_6042 7094308 7095315 - Methionine synthase vitamin-B12 independent PFAM: Methionine synthase vitamin-B12 independent~KEGG: dal:Dalk_5194 hypothetical protein gene gene6109 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6042 Amir_6043 Amir_6043 Amir_6043 7095423 7095752 - hypothetical protein gene gene6110 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6043 Amir_6044 Amir_6044 Amir_6044 7095850 7096368 + conserved hypothetical protein KEGG: bcb:BCB4264_A1184 hypothetical protein gene gene6111 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6044 Amir_6045 Amir_6045 Amir_6045 7096401 7097489 - tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase KEGG: gme:Gmet_0873 tRNA (5-methylaminomethyl-2- thiouridylate)-methyltransferase~TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase~PFAM: tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase gene gene6112 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6045 Amir_6046 Amir_6046 Amir_6046 7097495 7098670 - aminotransferase class V PFAM: aminotransferase class V%3B aromatic amino acid beta-eliminating lyase/threonine aldolase~KEGG: cysteine desulfurase NifS%3B K04487 cysteine desulfurase gene gene6113 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6046 Amir_6047 Amir_6047 Amir_6047 7098670 7100217 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: dac:Daci_3895 major facilitator transporter gene gene6114 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6047 Amir_6048 Amir_6048 Amir_6048 7100348 7101340 - phospholipid/glycerol acyltransferase PFAM: phospholipid/glycerol acyltransferase~SMART: phospholipid/glycerol acyltransferase~KEGG: cti:RALTA_A2392 phospholipid/glycerol acyltransferase%3B 1-acyl-sn-glycerol-3-phosphate acyltransferase transmembrane protein gene gene6115 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6048 Amir_6049 Amir_6049 Amir_6049 7101340 7102110 - ornithine-acyl(acyl carrier protein) N- acyltransferase KEGG: eba:ebA5570 hypothetical protein gene gene6116 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6049 Amir_6050 Amir_6050 Amir_6050 7102334 7103293 - Electron transfer flavoprotein alpha subunit PFAM: Electron transfer flavoprotein alpha subunit%3B Electron transfer flavoprotein alpha/beta-subunit~KEGG: met:M446_2006 electron transfer flavoprotein alpha subunit gene gene6117 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6050 Amir_6051 Amir_6051 Amir_6051 7103314 7104093 - Electron transfer flavoprotein alpha/beta- subunit PFAM: Electron transfer flavoprotein alpha/beta- subunit~KEGG: sat:SYN_02636 electron transfer flavoprotein beta-subunit gene gene6118 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6051 Amir_6052 Amir_6052 Amir_6052 7104349 7105191 + degV family protein TIGRFAM: degV family protein~PFAM: DegV family protein~KEGG: bsu:BSU11110 hypothetical protein gene gene6119 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6052 Amir_6053 Amir_6053 Amir_6053 7105268 7105411 + hypothetical protein gene gene6120 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6053 Amir_6054 Amir_6054 Amir_6054 7105585 7107504 - hypothetical protein KEGG: hypothetical protein gene gene6121 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6054 Amir_6055 Amir_6055 Amir_6055 7107522 7108244 - hypothetical protein KEGG: Eln%3B elastin gene gene6122 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6055 Amir_6056 Amir_6056 Amir_6056 7108632 7109378 + Methyltransferase type 11 PFAM: Methyltransferase type 11%3B Methyltransferase type 12~KEGG: sus:Acid_7436 methyltransferase type 11 gene gene6123 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6056 Amir_6057 Amir_6057 Amir_6057 7109375 7110874 + glycoside hydrolase family 57 PFAM: glycoside hydrolase family 57~KEGG: scl:sce1626 hypothetical protein gene gene6124 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6057 Amir_6058 Amir_6058 Amir_6058 7111116 7112369 + glycosyl transferase group 1 PFAM: glycosyl transferase group 1~KEGG: bha:BH1415 hypothetical protein gene gene6125 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6058 Amir_6059 Amir_6059 Amir_6059 7112403 7112684 - hypothetical protein gene gene6126 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6059 Amir_6060 Amir_6060 Amir_6060 7112929 7113357 - hypothetical protein KEGG: afw:Anae109_4021 dual specificity protein phosphatase gene gene6127 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6060 Amir_6061 Amir_6061 Amir_6061 7113391 7114137 - acetyltransferase (isoleucine patch superfamily)-like protein KEGG: bpy:Bphyt_6269 putative acetyltransferase gene gene6128 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6061 Amir_6062 Amir_6062 Amir_6062 7114207 7115139 + Inosine/uridine-preferring nucleoside hydrolase PFAM: Inosine/uridine-preferring nucleoside hydrolase~KEGG: asa:ASA_2899 ribonucleoside hydrolase 1 gene gene6129 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6062 Amir_6063 Amir_6063 Amir_6063 7115183 7116334 - hypothetical protein gene gene6130 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6063 Amir_6064 Amir_6064 Amir_6064 7116337 7117332 - Methyltransferase type 11 PFAM: Methyltransferase type 11%3B UbiE/COQ5 methyltransferase%3B Methyltransferase type 12~KEGG: bja:bll7234 hypothetical protein gene gene6131 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6064 Amir_6065 Amir_6065 Amir_6065 7117322 7118101 - Enoyl-CoA hydratase/isomerase PFAM: Enoyl-CoA hydratase/isomerase~KEGG: dal:Dalk_2640 enoyl-CoA hydratase/isomerase gene gene6132 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6065 Amir_6066 Amir_6066 Amir_6066 7118222 7119043 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: sfu:Sfum_3281 ABC transporter related gene gene6133 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6066 Amir_6067 Amir_6067 Amir_6067 7119238 7121343 + glycogen debranching enzyme GlgX KEGG: ade:Adeh_1056 glycogen debranching enzyme GlgX~TIGRFAM: glycogen debranching enzyme GlgX~PFAM: glycoside hydrolase family 13 domain protein%3B alpha amylase catalytic region~SMART: alpha amylase catalytic sub domain gene gene6134 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6067 Amir_6068 Amir_6068 Amir_6068 7121730 7122353 + cysteine dioxygenase type I PFAM: cysteine dioxygenase type I~KEGG: mxa:MXAN_0927 cysteine dioxygenase%2C type I gene gene6135 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6068 Amir_6069 Amir_6069 Amir_6069 7122350 7122964 + Rhodanese domain protein SMART: Rhodanese domain protein~KEGG: hypothetical protein gene gene6136 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6069 Amir_6070 Amir_6070 Amir_6070 7123257 7124369 + Tetratricopeptide TPR_4 PFAM: Tetratricopeptide TPR_4~KEGG: pin:Ping_0445 colicin uptake-like protein gene gene6137 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6070 Amir_6071 Amir_6071 Amir_6071 7124495 7127002 - alpha-glucan phosphorylase KEGG: gsu:GSU0371 carbohydrate phosphorylase family protein~TIGRFAM: alpha-glucan phosphorylase~PFAM: glycosyl transferase family 35 gene gene6138 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6071 Amir_6072 Amir_6072 Amir_6072 7127911 7129890 + alpha amylase catalytic region PFAM: alpha amylase catalytic region~SMART: alpha amylase catalytic sub domain~KEGG: afw:Anae109_3071 alpha amylase catalytic region gene gene6139 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6072 Amir_6073 Amir_6073 Amir_6073 7129983 7131797 + trehalose synthase KEGG: mxa:MXAN_3684 trehalose synthase~TIGRFAM: trehalose synthase~PFAM: alpha amylase catalytic region~SMART: alpha amylase catalytic sub domain gene gene6140 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6073 Amir_6074 Amir_6074 Amir_6074 7131802 7133130 + aminoglycoside phosphotransferase PFAM: aminoglycoside phosphotransferase~KEGG: rce:RC1_0516 trehalose synthase gene gene6141 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6074 Amir_6075 Amir_6075 Amir_6075 7133138 7135606 + 1%2C4-alpha-glucan branching enzyme KEGG: mxa:MXAN_3682 glycogen branching enzyme~TIGRFAM: 1%2C4-alpha-glucan branching enzyme~PFAM: alpha amylase all-beta%3B glycoside hydrolase family 13 domain protein%3B alpha amylase catalytic region~SMART: alpha amylase catalytic sub domain gene gene6142 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6075 Amir_6076 Amir_6076 Amir_6076 7135719 7137104 + metalloprotease-like protein KEGG: mno:Mnod_6074 protein of unknown function zinc metallopeptidase putative gene gene6143 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6076 Amir_6077 Amir_6077 Amir_6077 7137110 7137697 - hypothetical protein gene gene6144 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6077 Amir_6078 Amir_6078 Amir_6078 7137917 7139365 + protein of unknown function zinc metallopeptidase putative PFAM: protein of unknown function zinc metallopeptidase putative~KEGG: aba:Acid345_4616 protein of unknown function%2C zinc metallopeptidase putative gene gene6145 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6078 Amir_6079 Amir_6079 Amir_6079 7139477 7140457 - thioredoxin domain protein PFAM: Thioredoxin domain~KEGG: trx%3B thioredoxin%3B K05838 putative thioredoxin gene gene6146 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6079 Amir_6080 Amir_6080 Amir_6080 7140479 7141618 - hypothetical protein KEGG: bpd:BURPS668_A3050 hypothetical protein gene gene6147 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6080 Amir_6081 Amir_6081 Amir_6081 7141615 7141947 - protein of unknown function DUF77 PFAM: protein of unknown function DUF77~KEGG: mgm:Mmc1_2182 protein of unknown function DUF77 gene gene6148 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6081 Amir_6082 Amir_6082 Amir_6082 7141994 7142497 + transcriptional regulator%2C MarR family PFAM: regulatory protein MarR~SMART: regulatory protein MarR~KEGG: bcz:BCZK0946 MarR family transcriptional regulator gene gene6149 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6082 Amir_6083 Amir_6083 Amir_6083 7143088 7144179 + aminoglycoside phosphotransferase PFAM: aminoglycoside phosphotransferase~KEGG: scl:sce2125 hypothetical protein gene gene6150 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6083 Amir_6084 Amir_6084 Amir_6084 7144152 7144526 - hypothetical protein KEGG: smt:Smal_2278 inner membrane protein gene gene6151 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6084 Amir_6085 Amir_6085 Amir_6085 7144523 7145461 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: scl:sce5573 putative ABC transporter ATP- binding protein gene gene6152 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6085 Amir_6086 Amir_6086 Amir_6086 7145799 7146026 + hypothetical protein gene gene6153 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6086 Amir_6087 Amir_6087 Amir_6087 7146005 7146847 - transposase IS4 family protein PFAM: transposase IS4 family protein~KEGG: similar to F57G4.9 gene gene6154 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6087 Amir_6088 Amir_6088 Amir_6088 7146939 7147112 + hypothetical protein gene gene6155 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6088 Amir_6089 Amir_6089 Amir_6089 7147130 7147651 + hypothetical protein gene gene6156 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6089 Amir_6090 Amir_6090 Amir_6090 7147746 7148789 + transcriptional regulator%2C LacI family PFAM: regulatory protein LacI%3B periplasmic binding protein/LacI transcriptional regulator~SMART: regulatory protein LacI~KEGG: smd:Smed_4315 periplasmic binding protein/LacI transcriptional regulator gene gene6157 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6090 Amir_6091 Amir_6091 Amir_6091 7148786 7149805 + conserved hypothetical protein KEGG: hypothetical protein gene gene6158 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6091 Amir_6092 Amir_6092 Amir_6092 7149807 7150568 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: smd:Smed_0345 ABC transporter related gene gene6159 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6092 Amir_6093 Amir_6093 Amir_6093 7150565 7151599 + Monosaccharide-transporting ATPase PFAM: inner-membrane translocator~KEGG: smd:Smed_0344 monosaccharide-transporting ATPase gene gene6160 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6093 Amir_6094 Amir_6094 Amir_6094 7151619 7152590 + periplasmic binding protein/LacI transcriptional regulator PFAM: periplasmic binding protein/LacI transcriptional regulator~KEGG: rbsB%3B ABC transporter substrate binding protein (ribose)%3B K10439 ribose transport system substrate-binding protein gene gene6161 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6094 Amir_6095 Amir_6095 Amir_6095 7152661 7153632 - hypothetical protein KEGG: hne:HNE_0316 hypothetical protein gene gene6162 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6095 Amir_6096 Amir_6096 Amir_6096 7153801 7155474 + TAP domain protein PFAM: TAP domain protein%3B alpha/beta hydrolase fold~KEGG: bph:Bphy_7397 TAP domain-containing protein gene gene6163 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6096 Amir_6097 Amir_6097 Amir_6097 7155602 7157281 + TAP domain protein PFAM: TAP domain protein%3B alpha/beta hydrolase fold~KEGG: bph:Bphy_7397 TAP domain-containing protein gene gene6164 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6097 Amir_6098 Amir_6098 Amir_6098 7157747 7158403 - two component transcriptional regulator%2C LuxR family PFAM: response regulator receiver%3B regulatory protein LuxR~SMART: response regulator receiver%3B regulatory protein LuxR~KEGG: bsu:BSU33080 hypothetical protein gene gene6165 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6098 Amir_6099 Amir_6099 Amir_6099 7158441 7160018 - GAF sensor signal transduction histidine kinase PFAM: ATP-binding region ATPase domain protein%3B histidine kinase dimerization and phosphoacceptor region%3B GAF domain protein~SMART: ATP-binding region ATPase domain protein%3B GAF domain protein~KEGG: bce:BC2216 two-component sensor protein YhcY gene gene6166 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6099 Amir_6100 Amir_6100 Amir_6100 7160015 7160419 - hypothetical protein gene gene6167 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6100 Amir_6101 Amir_6101 Amir_6101 7160563 7161417 + N-acetyltransferase PFAM: N-acetyltransferase~KEGG: nar:Saro_0952 N-acetyltransferase gene gene6168 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6101 Amir_6102 Amir_6102 Amir_6102 7161556 7162110 - hypothetical protein gene gene6169 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6102 Amir_6103 Amir_6103 Amir_6103 7162173 7162751 - hypothetical protein gene gene6170 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6103 Amir_6104 Amir_6104 Amir_6104 7162904 7164097 - acetyl-CoA acetyltransferase TIGRFAM: acetyl-CoA acetyltransferase~PFAM: Thiolase~KEGG: bha:BH2029 thiolase (acetyl-CoA acetyltransferase) gene gene6171 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6104 Amir_6105 Amir_6105 Amir_6105 7164223 7164663 + methylmalonyl-CoA epimerase TIGRFAM: methylmalonyl-CoA epimerase~PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase~KEGG: gbm:Gbem_0558 methylmalonyl-CoA epimerase gene gene6172 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6105 Amir_6106 Amir_6106 Amir_6106 7164843 7166150 + hypothetical protein KEGG: hypothetical protein%3B K03497 chromosome partitioning protein%2C ParB family gene gene6173 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6106 Amir_6107 Amir_6107 Amir_6107 7166325 7167020 - alpha/beta hydrolase fold protein PFAM: alpha/beta hydrolase fold~KEGG: mxa:MXAN_3278 hydrolase%2C alpha/beta fold family gene gene6174 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6107 Amir_6108 Amir_6108 Amir_6108 7167060 7167590 + GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: mxa:MXAN_4010 acetyltransferase%2C GNAT family gene gene6175 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6108 Amir_6109 Amir_6109 Amir_6109 7167631 7167963 - hypothetical protein gene gene6176 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6109 Amir_6110 Amir_6110 Amir_6110 7168081 7168290 + regulatory protein%2C FmdB family TIGRFAM: regulatory protein%2C FmdB family~KEGG: mgm:Mmc1_2457 putative regulatory protein%2C FmdB family gene gene6177 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6110 Amir_6111 Amir_6111 Amir_6111 7168381 7168944 - hypothetical protein gene gene6178 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6111 Amir_6112 Amir_6112 Amir_6112 7169121 7169861 - dihydroxyacetone kinase%2C phosphotransfer subunit TIGRFAM: dihydroxyacetone kinase%2C phosphotransfer subunit%3B phosphocarrier%2C HPr family~PFAM: PTS system fructose subfamily IIA component%3B phosphoryl transfer system HPr~KEGG: dde:Dde_1180 phosphoenolpyruvate--protein phosphotransferase gene gene6179 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6112 Amir_6113 Amir_6113 Amir_6113 7169873 7170499 - dihydroxyacetone kinase%2C L subunit TIGRFAM: dihydroxyacetone kinase%2C L subunit~PFAM: Dak phosphatase~KEGG: gdi:GDI0264 putative PTS-dependent dihydroxyacetone kinase gene gene6180 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6113 Amir_6114 Amir_6114 Amir_6114 7170499 7171500 - dihydroxyacetone kinase%2C DhaK subunit KEGG: gdj:Gdia_2328 dihydroxyacetone kinase%2C DhaK subunit~TIGRFAM: dihydroxyacetone kinase%2C DhaK subunit~PFAM: Dak kinase gene gene6181 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6114 Amir_6115 Amir_6115 Amir_6115 7171665 7173170 - aldehyde dehydrogenase PFAM: Aldehyde Dehydrogenase~KEGG: aba:Acid345_1443 succinate-semialdehyde dehydrogenase (NAD(P)+) gene gene6182 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6115 Amir_6116 Amir_6116 Amir_6116 7173238 7174299 - hypothetical protein gene gene6183 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6116 Amir_6117 Amir_6117 Amir_6117 7174348 7174626 - hypothetical protein gene gene6184 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6117 Amir_6118 Amir_6118 Amir_6118 7174636 7176324 - SSS sodium solute transporter superfamily TIGRFAM: SSS sodium solute transporter superfamily~PFAM: Na+/solute symporter~KEGG: sus:Acid_3843 SSS family solute/sodium (Na+) symporter gene gene6185 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6118 Amir_6119 Amir_6119 Amir_6119 7176403 7177140 + hypothetical protein gene gene6186 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6119 Amir_6120 Amir_6120 Amir_6120 7177164 7177493 - hypothetical protein gene gene6187 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6120 Amir_6121 Amir_6121 Amir_6121 7177713 7178570 + transcriptional regulator%2C XRE family PFAM: helix-turn-helix domain protein~SMART: helix-turn-helix domain protein~KEGG: bra:BRADO4105 transcriptional regulator gene gene6188 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6121 Amir_6122 Amir_6122 Amir_6122 7178586 7178771 + protein of unknown function DUF397 PFAM: protein of unknown function DUF397 gene gene6189 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6122 Amir_6123 Amir_6123 Amir_6123 7178772 7179194 - dihydrolipoamide acetyltransferase KEGG: dar:Daro_0441 dihydrolipoamide acetyltransferase gene gene6190 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6123 Amir_6124 Amir_6124 Amir_6124 7179369 7180028 - protein of unknown function DUF91 PFAM: protein of unknown function DUF91~KEGG: bvi:Bcep1808_6934 hypothetical protein gene gene6191 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6124 Amir_6125 Amir_6125 Amir_6125 7180208 7180744 + NUDIX hydrolase PFAM: NUDIX hydrolase~KEGG: gdj:Gdia_2018 NUDIX hydrolase gene gene6192 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6125 Amir_6126 Amir_6126 Amir_6126 7180741 7181331 + GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: asa:ASA_2273 acetyltransferase gene gene6193 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6126 Amir_6127 Amir_6127 Amir_6127 7181422 7182189 - Enoyl-CoA hydratase/isomerase PFAM: Enoyl-CoA hydratase/isomerase~KEGG: rfr:Rfer_0608 enoyl-CoA hydratase/isomerase gene gene6194 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6127 Amir_6128 Amir_6128 Amir_6128 7182248 7182778 + isochorismatase hydrolase PFAM: isochorismatase hydrolase~KEGG: cvi:CV_1320 hypothetical protein gene gene6195 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6128 Amir_6129 Amir_6129 Amir_6129 7182860 7183156 + hypothetical protein gene gene6196 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6129 Amir_6130 Amir_6130 Amir_6130 7183273 7183638 + hypothetical protein gene gene6197 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6130 Amir_6131 Amir_6131 Amir_6131 7183643 7184173 + hypothetical protein gene gene6198 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6131 Amir_6132 Amir_6132 Amir_6132 7184236 7185492 - UDP-N-acetylglucosamine1-carboxyvinyltransferase TIGRFAM: UDP-N-acetylglucosamine 1- carboxyvinyltransferase~PFAM: EPSP synthase (3-phosphoshikimate 1- carboxyvinyltransferase)~KEGG: dol:Dole_2551 UDP-N-acetylglucosamine 1- carboxyvinyltransferase gene gene6199 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6132 Amir_6133 Amir_6133 Amir_6133 7185575 7186147 + ATP/cobalamin adenosyltransferase TIGRFAM: ATP/cobalamin adenosyltransferase~PFAM: cobalamin adenosyltransferase~KEGG: mmr:Mmar10_2358 ATP:cob(I)alamin adenosyltransferase gene gene6200 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6133 Amir_6134 Amir_6134 Amir_6134 7186226 7186660 - hypothetical protein gene gene6201 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6134 Amir_6135 Amir_6135 Amir_6135 7186692 7187057 - ATP synthase F1%2C epsilon subunit TIGRFAM: ATP synthase F1%2C epsilon subunit~PFAM: H+transporting two-sector ATPase delta/epsilon subunit~KEGG: rso:RSp0810 ATP synthase epsilon chain protein gene gene6202 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6135 Amir_6136 Amir_6136 Amir_6136 7187441 7188877 - ATP synthase F1%2C beta subunit KEGG: bcr:BCAH187_A5482 ATP synthase F1%2C beta subunit~TIGRFAM: ATP synthase F1%2C beta subunit~PFAM: H+transporting two-sector ATPase alpha/beta subunit central region%3B H+transporting two-sector ATPase alpha/beta subunit domain protein~SMART: AAA ATPase gene gene6203 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6136 Amir_6137 Amir_6137 Amir_6137 7188870 7189808 - ATP synthase F1%2C gamma subunit KEGG: lpc:LPC_3298 F0F1 ATP synthase subunit gamma~TIGRFAM: ATP synthase F1%2C gamma subunit~PFAM: H+transporting two-sector ATPase gamma subunit gene gene6204 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6137 Amir_6138 Amir_6138 Amir_6138 7189816 7191462 - ATP synthase F1%2C alpha subunit KEGG: dvu:DVU0777 F0F1 ATP synthase subunit alpha~TIGRFAM: ATP synthase F1%2C alpha subunit~PFAM: H+transporting two-sector ATPase alpha/beta subunit central region%3B H+transporting two-sector ATPase alpha/beta subunit domain protein gene gene6205 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6138 Amir_6139 Amir_6139 Amir_6139 7191527 7192354 - ATP synthase F1%2C delta subunit TIGRFAM: ATP synthase F1%2C delta subunit~PFAM: H+transporting two-sector ATPase delta (OSCP) subunit~KEGG: nwi:Nwi_0429 F0F1 ATP synthase subunit delta gene gene6206 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6139 Amir_6140 Amir_6140 Amir_6140 7192363 7192911 - ATP synthase F0%2C B subunit TIGRFAM: ATP synthase F0%2C B subunit~PFAM: H+transporting two-sector ATPase B/B' subunit~KEGG: ilo:IL2623 F0F1 ATP synthase subunit B gene gene6207 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6140 Amir_6141 Amir_6141 Amir_6141 7192943 7193164 - ATP synthase F0%2C C subunit TIGRFAM: ATP synthase F0%2C C subunit~PFAM: H+transporting two-sector ATPase C subunit~KEGG: atpH%3B ATPase III subunit%3B K02110 F-type H+- transporting ATPase subunit c gene gene6208 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6141 Amir_6142 Amir_6142 Amir_6142 7193254 7194105 - ATP synthase F0%2C A subunit TIGRFAM: ATP synthase F0%2C A subunit~PFAM: H+transporting two-sector ATPase A subunit~KEGG: acp:A2cp1_4495 ATP synthase F0%2C A subunit gene gene6209 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6142 Amir_6143 Amir_6143 Amir_6143 7194083 7194292 - hypothetical protein gene gene6210 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6143 Amir_6144 Amir_6144 Amir_6144 7194339 7194716 - hypothetical protein gene gene6211 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6144 Amir_6145 Amir_6145 Amir_6145 7195245 7196414 - glycosyl transferase family 4 PFAM: glycosyl transferase family 4~KEGG: afw:Anae109_4433 glycosyl transferase family protein gene gene6212 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6145 Amir_6146 Amir_6146 Amir_6146 7196486 7197136 - Sua5/YciO/YrdC/YwlC family protein TIGRFAM: Sua5/YciO/YrdC/YwlC family protein~PFAM: SUA5/yciO/yrdC domain~KEGG: bca:BCE_5452 SUA5/YciO/YrdC/YwlC family protein gene gene6213 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6146 Amir_6147 Amir_6147 Amir_6147 7197999 7198865 - modification methylase%2C HemK family TIGRFAM: modification methylase%2C HemK family~PFAM: methyltransferase small~KEGG: rce:RC1_2636 modification methylase%2CHemK family gene gene6214 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6147 Amir_6148 Amir_6148 Amir_6148 7198885 7200270 - dihydrolipoamide dehydrogenase TIGRFAM: dihydrolipoamide dehydrogenase~PFAM: pyridine nucleotide-disulphide oxidoreductase dimerization region%3B FAD-dependent pyridine nucleotide- disulphide oxidoreductase%3B glucose-inhibited division protein A~KEGG: rpa:RPA2863 dihydrolipoamide dehydrogenase gene gene6215 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6148 Amir_6149 Amir_6149 Amir_6149 7200631 7202742 - BAAT/Acyl-CoA thioester hydrolase PFAM: BAAT/Acyl-CoA thioester hydrolase%3B acyl-CoA thioester hydrolase/bile acid-CoA amino acid N- acetyltransferase~KEGG: sus:Acid_3161 palmitoyl-CoA hydrolase gene gene6216 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6149 Amir_6150 Amir_6150 Amir_6150 7203084 7204148 - peptide chain release factor 1 TIGRFAM: peptide chain release factor 1~PFAM: Class I peptide chain release factor%3B PCRF domain protein~KEGG: lip:LI0002 peptide chain release factor 1 gene gene6217 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6150 Amir_6151 Amir_6151 Amir_6151 7204231 7204443 - ribosomal protein L31 TIGRFAM: ribosomal protein L31~PFAM: ribosomal protein L31~KEGG: tbd:Tbd_0039 50S ribosomal protein L31 gene gene6218 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6151 Amir_6152 Amir_6152 Amir_6152 7204645 7205103 + hypothetical protein KEGG: mes:Meso_0153 chromate transporter%2C chromate ion transporter (CHR) family gene gene6219 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6152 Amir_6153 Amir_6153 Amir_6153 7205355 7207484 - transcription termination factor Rho KEGG: bba:Bd0065 transcription termination factor Rho~TIGRFAM: transcription termination factor Rho~PFAM: H+transporting two-sector ATPase alpha/beta subunit central region%3B Rho termination factor domain protein%3B Rho termination factor RNA-binding~SMART: AAA ATPase%3B Cold shock protein gene gene6220 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6153 Amir_6154 Amir_6154 Amir_6154 7207826 7208713 - homoserine kinase KEGG: sus:Acid_0902 homoserine kinase~TIGRFAM: homoserine kinase~PFAM: GHMP kinase%3B GHMP kinase domain protein gene gene6221 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6154 Amir_6155 Amir_6155 Amir_6155 7208710 7209786 - threonine synthase TIGRFAM: threonine synthase~PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit~KEGG: tgr:Tgr7_1440 threonine synthase gene gene6222 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6155 Amir_6156 Amir_6156 Amir_6156 7209783 7211096 - Homoserine dehydrogenase PFAM: homoserine dehydrogenase%3B amino acid-binding ACT domain protein%3B homoserine dehydrogenase NAD-binding~KEGG: gme:Gmet_1629 homoserine dehydrogenase gene gene6223 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6156 Amir_6157 Amir_6157 Amir_6157 7211099 7212523 - diaminopimelate decarboxylase TIGRFAM: diaminopimelate decarboxylase~PFAM: Orn/DAP/Arg decarboxylase 2~KEGG: bsu:BSU23380 diaminopimelate decarboxylase gene gene6224 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6157 Amir_6158 Amir_6158 Amir_6158 7212523 7214175 - arginyl-tRNA synthetase KEGG: dvl:Dvul_1814 arginyl-tRNA synthetase~TIGRFAM: arginyl-tRNA synthetase gene gene6225 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6158 Amir_6159 Amir_6159 Amir_6159 7214355 7215224 + hypothetical protein KEGG: scl:sce2901 hypothetical protein gene gene6226 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6159 Amir_6160 Amir_6160 Amir_6160 7215226 7215987 + protein of unknown function DUF305 PFAM: protein of unknown function DUF305~KEGG: mmr:Mmar10_0047 hypothetical protein gene gene6227 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6160 Amir_6161 Amir_6161 Amir_6161 7216436 7220716 + alpha-1%2C2-mannosidase TIGRFAM: alpha-1%2C2-mannosidase~PFAM: glycosyl hydrolase 92%3B coagulation factor 5/8 type domain protein~KEGG: sml:Smlt3935 putative glycosyltransferase gene gene6228 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6161 Amir_6162 Amir_6162 Amir_6162 7220737 7221666 - cation diffusion facilitator family transporter TIGRFAM: cation diffusion facilitator family transporter~PFAM: cation efflux protein~KEGG: mpo:Mpop_4086 cation diffusion facilitator family transporter gene gene6229 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6162 Amir_6163 Amir_6163 Amir_6163 7222001 7223782 - protein of unknown function DUF262 PFAM: protein of unknown function DUF262~KEGG: xau:Xaut_2248 hypothetical protein gene gene6231 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6163 Amir_6164 Amir_6164 Amir_6164 7223880 7225718 - glycoside hydrolase family 5 PFAM: glycoside hydrolase family 5~KEGG: pla:Plav_0833 hypothetical protein gene gene6232 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6164 Amir_6165 Amir_6165 Amir_6165 7225870 7227819 - hypothetical protein gene gene6233 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6165 Amir_6166 Amir_6166 Amir_6166 7228008 7231118 - transcriptional regulator%2C SARP family PFAM: transcriptional activator domain%3B transcriptional regulator domain protein~SMART: AAA ATPase~KEGG: sus:Acid_5780 serine/threonine protein kinase gene gene6234 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6166 Amir_6167 Amir_6167 Amir_6167 7231247 7232116 + alpha/beta hydrolase fold protein PFAM: alpha/beta hydrolase fold~KEGG: azo:azo0046 haloacetate dehalogenase gene gene6235 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6167 Amir_6168 Amir_6168 Amir_6168 7232705 7233124 - transcriptional regulator%2C XRE family SMART: helix-turn-helix domain protein gene gene6236 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6168 Amir_6169 Amir_6169 Amir_6169 7233262 7233492 + hypothetical protein gene gene6237 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6169 Amir_6170 Amir_6170 Amir_6170 7233882 7234148 + hypothetical protein gene gene6238 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6170 Amir_6171 Amir_6171 Amir_6171 7234196 7235281 - conserved hypothetical protein KEGG: mca:MCA0835 fic family protein gene gene6239 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6171 Amir_6172 Amir_6172 Amir_6172 7235501 7236061 - Activator of Hsp90 ATPase 1 family protein PFAM: Activator of Hsp90 ATPase 1 family protein~KEGG: mlo:mll5358 hypothetical protein gene gene6240 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6172 Amir_6173 Amir_6173 Amir_6173 7236310 7236786 + transcriptional activator ligand binding domain protein PFAM: transcription activator effector binding~KEGG: aav:Aave_4607 transcription activator%2C effector binding gene gene6241 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6173 Amir_6174 Amir_6174 Amir_6174 7236935 7237816 + Luciferase-like monooxygenase PFAM: Luciferase-like monooxygenase~KEGG: pla:Plav_0210 luciferase family protein gene gene6242 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6174 Amir_6175 Amir_6175 Amir_6175 7237910 7238944 - GTPase EngC PFAM: GTPase EngC~SMART: AAA ATPase~KEGG: gsu:GSU2530 GTPase YjeQ gene gene6243 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6175 Amir_6176 Amir_6176 Amir_6176 7239655 7239750 + hypothetical protein gene gene6244 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6176 Amir_6177 Amir_6177 Amir_6177 7239815 7240942 + nitroreductase PFAM: nitroreductase~KEGG: bcz:pE33L466_0413 NADH oxidase gene gene6245 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6177 Amir_6178 Amir_6178 Amir_6178 7240986 7241966 - aldo/keto reductase PFAM: aldo/keto reductase~KEGG: stm:STM2406 putative oxidoreductase gene gene6246 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6178 Amir_6179 Amir_6179 Amir_6179 7241974 7242828 - periplasmic binding protein/LacI transcriptional regulator PFAM: periplasmic binding protein/LacI transcriptional regulator~KEGG: scl:sce0662 LacI family transcription regulator gene gene6247 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6179 Amir_6180 Amir_6180 Amir_6180 7242825 7245263 - beta-mannosidase protein KEGG: ret:RHE_CH00480 beta-mannosidase protein gene gene6248 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6180 Amir_6181 Amir_6181 Amir_6181 7245381 7247504 + glycoside hydrolase clan GH-D PFAM: glycoside hydrolase clan GH-D~KEGG: esa:ESA_03854 hypothetical protein gene gene6249 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6181 Amir_6182 Amir_6182 Amir_6182 7247709 7247888 - pseudogene gene6250 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6182 Amir_6183 Amir_6183 Amir_6183 7247976 7248356 + conserved hypothetical protein KEGG: cvi:CV_1450 hypothetical protein gene gene6251 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6183 Amir_6184 Amir_6184 Amir_6184 7248361 7248534 - pseudogene gene6252 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6184 Amir_6185 Amir_6185 Amir_6185 7248654 7249511 - ABC transporter related PFAM: ABC transporter related%3B Oligopeptide/dipeptide ABC transporter domain protein~SMART: AAA ATPase~KEGG: vsp:VS_II1529 ABC systems: ATP-binding protein gene gene6253 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6185 Amir_6186 Amir_6186 Amir_6186 7249508 7251280 - ABC transporter related PFAM: ABC transporter related%3B binding-protein- dependent transport systems inner membrane component~SMART: AAA ATPase~KEGG: mxa:MXAN_6553 putative oligopeptide/dipeptide ABC transporter%2C permease/ATP-binding protein gene gene6254 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6186 Amir_6187 Amir_6187 Amir_6187 7251294 7252283 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: scl:sce4301 peptide ABC transporter%2C permease protein gene gene6255 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6187 Amir_6188 Amir_6188 Amir_6188 7252288 7253970 - extracellular solute-binding protein family 5 PFAM: extracellular solute-binding protein family 5~KEGG: scl:sce4302 ABC-type dipeptide transport system%2C periplasmic component gene gene6256 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6188 Amir_6189 Amir_6189 Amir_6189 7254148 7255356 + ROK family protein PFAM: ROK family protein~KEGG: mxa:MXAN_6549 transcriptional regulator%2C ROK family gene gene6257 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6189 Amir_6190 Amir_6190 Amir_6190 7255414 7255536 - hypothetical protein gene gene6258 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6190 Amir_6191 Amir_6191 Amir_6191 7255777 7257063 - monooxygenase KEGG: bav:BAV1845 monooxygenase gene gene6259 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6191 Amir_6192 Amir_6192 Amir_6192 7257063 7258151 - monooxygenase KEGG: bav:BAV1846 monooxygenase gene gene6260 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6192 Amir_6193 Amir_6193 Amir_6193 7258238 7259296 - Sarcosine oxidase PFAM: FAD dependent oxidoreductase~KEGG: sus:Acid_5898 N-methyltryptophan oxidase gene gene6261 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6193 Amir_6194 Amir_6194 Amir_6194 7259436 7260221 - modification methylase%2C HemK family TIGRFAM: modification methylase%2C HemK family~PFAM: methyltransferase small~KEGG: ppd:Ppro_3005 HemK family modification methylase gene gene6262 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6194 Amir_6195 Amir_6195 Amir_6195 7260387 7261649 - putative RNA polymerase%2C sigma-24 subunit%2C ECF subfamily TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family~PFAM: Sigma-70 region 4 type 2%3B sigma-70 region 2 domain protein~KEGG: scl:sce6417 ECF subfamily RNA polymerase sigma factor gene gene6263 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6195 Amir_6196 Amir_6196 Amir_6196 7261740 7262162 - YCII-related protein PFAM: YCII-related~KEGG: bmj:BMULJ_04986 hypothetical protein gene gene6264 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6196 Amir_6197 Amir_6197 Amir_6197 7262316 7263008 - transcriptional regulator%2C AraC family SMART: helix-turn-helix- domain containing protein AraC type~KEGG: scl:sce0732 AraC family transcriptional regulator gene gene6265 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6197 Amir_6198 Amir_6198 Amir_6198 7263074 7263826 + NmrA family protein PFAM: NmrA family protein~KEGG: scl:sce0731 hypothetical protein gene gene6266 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6198 Amir_6199 Amir_6199 Amir_6199 7263814 7265091 - PEP phosphonomutase-like protein KEGG: pzu:PHZ_c3387 hypothetical protein gene gene6267 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6199 Amir_6200 Amir_6200 Amir_6200 7265142 7266098 - Alcohol dehydrogenase GroES domain protein PFAM: Alcohol dehydrogenase GroES domain protein~KEGG: bxe:Bxe_C0078 putative zinc-binding dehydrogenase gene gene6268 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6200 Amir_6201 Amir_6201 Amir_6201 7266202 7266771 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: mxa:MXAN_2145 transcriptional regulator%2C TetR family gene gene6269 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6201 Amir_6202 Amir_6202 Amir_6202 7267149 7267982 + putative transcriptional regulator%2C ArsR family SMART: regulatory protein ArsR~KEGG: met:M446_4445 ArsR family transcriptional regulator gene gene6270 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6202 Amir_6203 Amir_6203 Amir_6203 7267989 7268708 - protein serine/threonine phosphatase PFAM: Protein phosphatase 2C-like~SMART: protein phosphatase 2C domain protein~KEGG: afw:Anae109_3817 protein phosphatase 2C-like protein gene gene6271 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6203 Amir_6204 Amir_6204 Amir_6204 7268752 7269804 - ROK family protein PFAM: ROK family protein~KEGG: cvi:CV_2895 transcriptional regulator protein gene gene6272 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6204 Amir_6205 Amir_6205 Amir_6205 7270095 7271231 - Serine-type D-Ala-D-Ala carboxypeptidase PFAM: beta-lactamase~KEGG: bcb:BCB4264_A3030 alkaline D-peptidase gene gene6273 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6205 Amir_6206 Amir_6206 Amir_6206 7271505 7273115 + glycoside hydrolase family 18 PFAM: glycoside hydrolase family 18%3B cellulose- binding family II~SMART: chitinase II%3B cellulose-binding family II~KEGG: cja:CJA_2611 endo-chitinase%2C putative%2C chi18D gene gene6274 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6206 Amir_6207 Amir_6207 Amir_6207 7273237 7275414 - helicase%2C RecD/TraA family KEGG: ppd:Ppro_0186 RecD/TraA family helicase~TIGRFAM: helicase%2C RecD/TraA family~SMART: AAA ATPase gene gene6275 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6207 Amir_6208 Amir_6208 Amir_6208 7275747 7276427 + two component transcriptional regulator%2C winged helix family PFAM: response regulator receiver%3B transcriptional regulator domain protein~SMART: response regulator receiver~KEGG: glo:Glov_0588 two component transcriptional regulator%2C winged helix family gene gene6276 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6208 Amir_6209 Amir_6209 Amir_6209 7276424 7277455 + histidine kinase PFAM: ATP-binding region ATPase domain protein%3B histidine kinase HAMP region domain protein%3B histidine kinase A domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B histidine kinase HAMP region domain protein~KEGG: lch:Lcho_2475 histidine kinase gene gene6277 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6209 Amir_6210 Amir_6210 Amir_6210 7277556 7279037 + hypothetical protein KEGG: pzu:PHZ_c1830 ABC transporter%2C ATP-binding protein CydD gene gene6278 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6210 Amir_6211 Amir_6211 Amir_6211 7279229 7280404 + MscS Mechanosensitive ion channel PFAM: MscS Mechanosensitive ion channel~KEGG: bac:BamMC406_1797 MscS mechanosensitive ion channel gene gene6279 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6211 Amir_6212 Amir_6212 Amir_6212 7280443 7280994 + hypothetical protein KEGG: swi:Swit_4745 RND family efflux transporter MFP subunit gene gene6280 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6212 Amir_6213 Amir_6213 Amir_6213 7281702 7284941 + peptidase S8 and S53 subtilisin kexin sedolisin PFAM: peptidase S8 and S53 subtilisin kexin sedolisin~KEGG: hypothetical protein gene gene6281 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6213 Amir_6214 Amir_6214 Amir_6214 7285109 7286764 + fumarate reductase/succinate dehydrogenase flavoprotein domain protein PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein%3B FAD dependent oxidoreductase~KEGG: mlo:mll5046 putative FAD-binding dehydrogenase gene gene6282 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6214 Amir_6215 Amir_6215 Amir_6215 7286799 7287638 - transcriptional regulator%2C LysR family PFAM: regulatory protein LysR%3B LysR substrate- binding~KEGG: dvu:DVU3313 LysR family transcriptional regulator gene gene6283 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6215 Amir_6216 Amir_6216 Amir_6216 7287732 7288499 + NADP oxidoreductase coenzyme F420-dependent PFAM: NADP oxidoreductase coenzyme F420-dependent~KEGG: ccv:CCV52592_0326 NADP oxidoreductase%2C coenzyme F420-dependent gene gene6284 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6216 Amir_6217 Amir_6217 Amir_6217 7288503 7288979 - flavin reductase domain protein FMN-binding PFAM: flavin reductase domain protein FMN-binding~KEGG: dac:Daci_0096 flavin reductase domain- containing protein gene gene6285 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6217 Amir_6218 Amir_6218 Amir_6218 7289247 7290017 - hypothetical protein gene gene6286 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6218 Amir_6219 Amir_6219 Amir_6219 7290014 7291804 - hypothetical protein KEGG: GH21940 gene product from transcript GH21940- RA gene gene6287 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6219 Amir_6220 Amir_6220 Amir_6220 7291818 7292267 - hypothetical protein gene gene6288 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6220 Amir_6221 Amir_6221 Amir_6221 7292367 7295162 + transcriptional regulator%2C SARP family PFAM: transcriptional activator domain%3B Tetratricopeptide TPR_4%3B TPR repeat-containing protein%3B NB- ARC domain protein%3B transcriptional regulator domain protein~SMART: AAA ATPase%3B Tetratricopeptide domain protein~KEGG: scl:sce5225 protein kinase gene gene6289 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6221 Amir_6222 Amir_6222 Amir_6222 7295607 7297466 - conserved hypothetical protein KEGG: hypothetical protein gene gene6290 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6222 Amir_6223 Amir_6223 Amir_6223 7298025 7300133 + diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) KEGG: pfl:PFL_0190 sensory box-containing diguanylate cyclase%2C putative~TIGRFAM: PAS sensor protein%3B diguanylate cyclase~PFAM: EAL domain protein%3B PAS fold-3 domain protein%3B GGDEF domain containing protein%3B PAS fold-4 domain protein%3B PAS fold domain protein~SMART: GGDEF domain containing protein%3B PAC repeat- containing protein%3B EAL domain protein%3B PAS domain containing protein gene gene6291 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6223 Amir_6224 Amir_6224 Amir_6224 7300267 7301118 + peptidase S1 and S6 chymotrypsin/Hap PFAM: peptidase S1 and S6 chymotrypsin/Hap~KEGG: shw:Sputw3181_3433 protease Do gene gene6292 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6224 Amir_6225 Amir_6225 Amir_6225 7301255 7302844 + acyl-CoA dehydrogenase domain protein PFAM: acyl-CoA dehydrogenase domain protein~KEGG: aeh:Mlg_1719 acyl-CoA dehydrogenase domain- containing protein gene gene6293 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6225 Amir_6226 Amir_6226 Amir_6226 7302856 7303602 + Enoyl-CoA hydratase/isomerase PFAM: Enoyl-CoA hydratase/isomerase~KEGG: mxa:MXAN_2034 enoyl-CoA hydratase gene gene6294 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6226 Amir_6227 Amir_6227 Amir_6227 7303651 7303959 - hypothetical protein gene gene6295 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6227 Amir_6228 Amir_6228 Amir_6228 7303970 7305121 - acyl-CoA dehydrogenase domain protein PFAM: acyl-CoA dehydrogenase domain protein%3B Acyl- CoA dehydrogenase type 2 domain~KEGG: reu:Reut_C6425 butyryl-CoA dehydrogenase gene gene6296 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6228 Amir_6229 Amir_6229 Amir_6229 7305127 7307058 - Carbamoyl-phosphate synthase L chain ATP- binding PFAM: Carbamoyl-phosphate synthase L chain ATP- binding%3B biotin carboxylase domain protein%3B ATP-dependent carboxylate-amine ligase domain protein ATP-grasp%3B biotin/lipoyl attachment domain-containing protein%3B Carbamoyl-phosphate synthetase large chain domain protein~KEGG: mag:amb0674 acetyl-/propionyl-coenzyme A carboxylase alpha chain gene gene6297 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6229 Amir_6230 Amir_6230 Amir_6230 7307058 7308659 - Propionyl-CoA carboxylase PFAM: carboxyl transferase~KEGG: bmj:BMULJ_05049 propionyl-CoA carboxylase beta chain gene gene6298 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6230 Amir_6231 Amir_6231 Amir_6231 7309015 7309608 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: reu:Reut_B5488 TetR family transcriptional regulator gene gene6299 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6231 Amir_6232 Amir_6232 Amir_6232 7310055 7312226 + hypothetical protein KEGG: mxa:MXAN_4195 hypothetical protein gene gene6300 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6232 Amir_6233 Amir_6233 Amir_6233 7312206 7313165 - pseudogene gene6301 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6233 Amir_6234 Amir_6234 Amir_6234 7313339 7314043 - protein of unknown function DUF1023 PFAM: protein of unknown function DUF1023~KEGG: hypothetical protein gene gene6302 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6234 Amir_6235 Amir_6235 Amir_6235 7314096 7314743 - two component transcriptional regulator%2C LuxR family PFAM: response regulator receiver%3B regulatory protein LuxR%3B Sigma-70 region 4 type 2~SMART: response regulator receiver%3B regulatory protein LuxR~KEGG: scl:sce5431 two-component system response regulator gene gene6303 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6235 Amir_6236 Amir_6236 Amir_6236 7314917 7316080 - histidine kinase PFAM: histidine kinase dimerization and phosphoacceptor region%3B ATP-binding region ATPase domain protein~SMART: ATP-binding region ATPase domain protein~KEGG: scl:sce5432 putative two-component system sensor kinase gene gene6304 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6236 Amir_6237 Amir_6237 Amir_6237 7316238 7316738 + hypothetical protein gene gene6305 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6237 Amir_6238 Amir_6238 Amir_6238 7316946 7318604 + cellulose-binding family II PFAM: cellulose-binding family II%3B Fibronectin type III domain protein~SMART: cellulose-binding family II%3B Fibronectin type III domain protein~KEGG: azc:AZC_2901 type III fibronectin gene gene6306 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6238 Amir_6239 Amir_6239 Amir_6239 7318588 7319619 - homoserine O-acetyltransferase KEGG: ank:AnaeK_2457 homoserine O-acetyltransferase~TIGRFAM: homoserine O-acetyltransferase~PFAM: alpha/beta hydrolase fold gene gene6307 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6239 Amir_6240 Amir_6240 Amir_6240 7319616 7320905 - O-acetylhomoserine/O-acetylserine sulfhydrylase KEGG: bha:BH2603 O-acetylhomoserine aminocarboxypropyltransferase~TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase~PFAM: Cys/Met metabolism pyridoxal-phosphate- dependent protein%3B aromatic amino acid beta-eliminating lyase/threonine aldolase gene gene6308 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6240 Amir_6241 Amir_6241 Amir_6241 7321029 7322027 + oxidoreductase domain protein PFAM: oxidoreductase domain protein%3B Semialdehyde dehydrogenase NAD - binding%3B Oxidoreductase domain~KEGG: scl:sce9140 putative oxidoreductase gene gene6309 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6241 Amir_6242 Amir_6242 Amir_6242 7322029 7322373 - hypothetical protein gene gene6310 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6242 Amir_6243 Amir_6243 Amir_6243 7322612 7323298 - hypothetical protein gene gene6311 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6243 Amir_6244 Amir_6244 Amir_6244 7323444 7323863 + proteinase inhibitor I16 subtilisin-type inhibitor PFAM: proteinase inhibitor I16 subtilisin-type inhibitor gene gene6312 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6244 Amir_6245 Amir_6245 Amir_6245 7324109 7324600 + Glutathione peroxidase PFAM: glutathione peroxidase~KEGG: pap:PSPA7_4682 glutathione peroxidase gene gene6313 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6245 Amir_6246 Amir_6246 Amir_6246 7324742 7326109 - L-serine dehydratase 1 KEGG: pap:PSPA7_2808 L-serine dehydratase~TIGRFAM: L-serine dehydratase 1~PFAM: serine dehydratase alpha chain%3B serine dehydratase beta chain gene gene6314 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6246 Amir_6247 Amir_6247 Amir_6247 7326113 7326496 - glycine cleavage system H protein TIGRFAM: glycine cleavage system H protein~PFAM: glycine cleavage H-protein~KEGG: bcr:BCAH187_A5133 glycine cleavage system H protein gene gene6315 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6247 Amir_6248 Amir_6248 Amir_6248 7326907 7328013 + alanine dehydrogenase KEGG: dar:Daro_2145 L-alanine dehydrogenase~TIGRFAM: alanine dehydrogenase~PFAM: alanine dehydrogenase/PNT domain protein gene gene6316 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6248 Amir_6249 Amir_6249 Amir_6249 7328700 7329122 + hypothetical protein gene gene6317 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6249 Amir_6250 Amir_6250 Amir_6250 7329173 7330546 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ccs:CCNA_03389 lantibiotic transport ATP- binding protein gene gene6318 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6250 Amir_6251 Amir_6251 Amir_6251 7330546 7331421 + hypothetical protein gene gene6319 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6251 Amir_6252 Amir_6252 Amir_6252 7331430 7335740 + ABC transporter related PFAM: ABC transporter related%3B ABC transporter transmembrane region~SMART: AAA ATPase~KEGG: see:SNSL254_A2969 ATP binding cassette gene gene6320 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6252 Amir_6253 Amir_6253 Amir_6253 7337165 7340893 + 2-oxoglutarate dehydrogenase%2C E1 subunit TIGRFAM: 2-oxoglutarate dehydrogenase%2C E1 subunit~PFAM: dehydrogenase E1 component%3B Transketolase central region%3B catalytic domain of components of various dehydrogenase complexes~KEGG: sus:Acid_5307 alpha-ketoglutarate decarboxylase gene gene6321 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6253 Amir_6254 Amir_6254 Amir_6254 7340900 7341082 + hypothetical protein gene gene6322 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6254 Amir_6255 Amir_6255 Amir_6255 7341204 7341788 - hypothetical protein KEGG: GF17241 gene product from transcript GF17241- RA gene gene6323 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6255 Amir_6256 Amir_6256 Amir_6256 7341839 7342843 - aldo/keto reductase PFAM: aldo/keto reductase~KEGG: scl:sce5264 putative sugar-phosphate dehydrogenase gene gene6324 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6256 Amir_6257 Amir_6257 Amir_6257 7342888 7343943 - helix-turn-helix domain protein PFAM: helix-turn-helix domain protein%3B protein of unknown function DUF955~SMART: helix-turn-helix domain protein~KEGG: ppd:Ppro_0104 helix-turn-helix domain- containing protein gene gene6325 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6257 Amir_6258 Amir_6258 Amir_6258 7343936 7344682 - hypothetical protein gene gene6326 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6258 Amir_6259 Amir_6259 Amir_6259 7344887 7347259 - NB-ARC domain protein PFAM: NB-ARC domain protein~KEGG: scl:sce5225 protein kinase gene gene6327 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6259 Amir_6260 Amir_6260 Amir_6260 7347256 7347849 - hypothetical protein gene gene6328 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6260 Amir_6261 Amir_6261 Amir_6261 7347846 7348121 - hypothetical protein gene gene6329 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6261 Amir_6262 Amir_6262 Amir_6262 7348314 7349459 - imidazolonepropionase KEGG: pzu:PHZ_c0465 imidazolone-5-propionate hydrolase~TIGRFAM: imidazolonepropionase~PFAM: amidohydrolase%3B Amidohydrolase 3 gene gene6330 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6262 Amir_6263 Amir_6263 Amir_6263 7349536 7350825 - formiminoglutamate deiminase TIGRFAM: formiminoglutamate deiminase~PFAM: amidohydrolase%3B Amidohydrolase 3~KEGG: pzu:PHZ_c0464 formiminoglutamate deiminase gene gene6331 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6263 Amir_6264 Amir_6264 Amir_6264 7350986 7352161 - amidase%2C hydantoinase/carbamoylase family KEGG: met:M446_1342 amidase~TIGRFAM: amidase%2C hydantoinase/carbamoylase family~PFAM: peptidase M20 gene gene6332 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6264 Amir_6265 Amir_6265 Amir_6265 7352158 7353804 - urocanate hydratase KEGG: bsu:BSU39360 urocanate hydratase~TIGRFAM: urocanate hydratase~PFAM: Urocanase gene gene6333 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6265 Amir_6266 Amir_6266 Amir_6266 7353798 7355309 - histidine ammonia-lyase KEGG: scl:sce6082 hypothetical protein~TIGRFAM: histidine ammonia-lyase~PFAM: phenylalanine/histidine ammonia-lyase gene gene6334 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6266 Amir_6267 Amir_6267 Amir_6267 7355768 7356547 + transcriptional regulator%2C IclR family PFAM: regulatory protein IclR%3B Transcriptional regulator IclR~SMART: regulatory protein IclR~KEGG: cti:RALTA_B0569 putative transcriptional regulator%2C IclR family gene gene6335 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6267 Amir_6268 Amir_6268 Amir_6268 7356599 7357483 - Substrate-binding region of ABC-type glycine betaine transport system PFAM: Substrate-binding region of ABC-type glycine betaine transport system~KEGG: opuAC%3B substrate-binding region of ABC-type glycine betaine transport system gene gene6336 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6268 Amir_6269 Amir_6269 Amir_6269 7357480 7358211 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ABC transporter%3B K05846 osmoprotectant transport system permease protein gene gene6337 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6269 Amir_6270 Amir_6270 Amir_6270 7358208 7358864 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: proline/glycine betaine ABC transporter%3B K05846 osmoprotectant transport system permease protein gene gene6338 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6270 Amir_6271 Amir_6271 Amir_6271 7358857 7359939 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: ABC transporter nucleotide binding/ATPase protein (proline/glycine/betaine) gene gene6339 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6271 Amir_6272 Amir_6272 Amir_6272 7360096 7361655 + protein of unknown function DUF43 PFAM: protein of unknown function DUF43~KEGG: rpb:RPB_2044 hypothetical protein gene gene6340 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6272 Amir_6273 Amir_6273 Amir_6273 7361683 7362294 - hypothetical protein gene gene6341 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6273 Amir_6274 Amir_6274 Amir_6274 7362358 7362981 - hypothetical protein gene gene6342 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6274 Amir_6275 Amir_6275 Amir_6275 7362978 7364222 - hypothetical protein KEGG: rru:Rru_A3216 hypothetical protein gene gene6343 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6275 Amir_6276 Amir_6276 Amir_6276 7364222 7364530 - hypothetical protein gene gene6344 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6276 Amir_6277 Amir_6277 Amir_6277 7364527 7365048 - methyl-accepting chemotaxis sensory transducer KEGG: dac:Daci_5082 methyl-accepting chemotaxis sensory transducer gene gene6345 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6277 Amir_6278 Amir_6278 Amir_6278 7365181 7368375 - diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) KEGG: tbd:Tbd_1456 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)~TIGRFAM: diguanylate cyclase%3B PAS sensor protein~PFAM: EAL domain protein%3B PAS fold-3 domain protein%3B GGDEF domain containing protein%3B PAS fold-4 domain protein%3B PAS fold domain protein~SMART: EAL domain protein%3B GGDEF domain containing protein%3B PAC repeat-containing protein%3B PAS domain containing protein gene gene6346 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6278 Amir_6279 Amir_6279 Amir_6279 7368614 7369792 - Malate dehydrogenase (oxaloacetate- decarboxylating) PFAM: malic protein NAD-binding%3B malic protein domain protein~KEGG: bcb:BCB4264_A4713 putative malate dehydrogenase gene gene6347 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6279 Amir_6280 Amir_6280 Amir_6280 7370108 7370704 + dTDP-4-dehydrorhamnose 3%2C5-epimerase KEGG: ecw:EcE24377A_2329 dTDP-4-dehydrorhamnose 3%2C5- epimerase~TIGRFAM: dTDP-4-dehydrorhamnose 3%2C5-epimerase~PFAM: dTDP-4-dehydrorhamnose 35-epimerase related gene gene6348 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6280 Amir_6281 Amir_6281 Amir_6281 7370708 7371037 - putative phage repressor TIGRFAM: nickel-type superoxide dismutase maturation protease~PFAM: peptidase S24 and S26 domain protein~KEGG: Peptidase S24-like domain containing protein%3B K09647 mitochondrial inner membrane protease subunit 1 gene gene6349 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6281 Amir_6282 Amir_6282 Amir_6282 7371115 7371531 + superoxide dismutase%2C Ni KEGG: mmw:Mmwyl1_1415 superoxide dismutase Ni-type~TIGRFAM: superoxide dismutase%2C Ni~PFAM: Superoxide dismutase Ni-type gene gene6350 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6282 Amir_6283 Amir_6283 Amir_6283 7371611 7372714 - conserved hypothetical protein KEGG: bur:Bcep18194_B0516 hypothetical protein gene gene6351 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6283 Amir_6284 Amir_6284 Amir_6284 7372905 7373513 + Phosphoglycerate mutase PFAM: Phosphoglycerate mutase~KEGG: rle:RL0954 putative phosphoglycerate mutase gene gene6352 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6284 Amir_6285 Amir_6285 Amir_6285 7373630 7374421 - protein of unknown function DUF574 PFAM: protein of unknown function DUF574~KEGG: mxa:MXAN_2293 hypothetical protein gene gene6353 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6285 Amir_6286 Amir_6286 Amir_6286 7375145 7375897 - peptidase S1 and S6 chymotrypsin/Hap PFAM: peptidase S1 and S6 chymotrypsin/Hap~SMART: peptidase S1 and S6 chymotrypsin/Hap~KEGG: scl:sce6803 serine protease gene gene6354 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6286 Amir_6287 Amir_6287 Amir_6287 7376046 7376447 - hypothetical protein gene gene6355 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6287 Amir_6288 Amir_6288 Amir_6288 7376704 7377681 + diacylglycerol kinase catalytic region PFAM: diacylglycerol kinase catalytic region~SMART: diacylglycerol kinase catalytic region~KEGG: mag:amb0267 Sphingosine kinase and enzyme related to diacylglycerol kinase gene gene6356 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6288 Amir_6289 Amir_6289 Amir_6289 7377909 7378163 + transcription factor WhiB PFAM: transcription factor WhiB gene gene6357 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6289 Amir_6290 Amir_6290 Amir_6290 7378472 7379950 - signal transduction histidine kinase PFAM: histidine kinase dimerisation/phosphoacceptor%3B PAS fold-4 domain protein%3B ATP-binding region ATPase domain protein~SMART: ATP-binding region ATPase domain protein~KEGG: pca:Pcar_2710 hypothetical protein gene gene6358 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6290 Amir_6291 Amir_6291 Amir_6291 7380328 7380720 - anti-sigma factor TIGRFAM: anti-sigma factor~KEGG: tgr:Tgr7_1713 putative transmembrane anti- sigma factor gene gene6359 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6291 Amir_6292 Amir_6292 Amir_6292 7380717 7381376 - RNA polymerase%2C sigma-24 subunit%2C ECF subfamily TIGRFAM: RNA polymerase sigma-70 factor%3B RNA polymerase sigma factor%2C sigma-70 family~PFAM: sigma-70 region 2 domain protein%3B Sigma-70 region 4 type 2%3B sigma-70 region 4 domain protein~KEGG: scl:sce7566 ECF family RNA polymerase sigma factor gene gene6360 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6292 Amir_6293 Amir_6293 Amir_6293 7381569 7382051 + ybaK/ebsC protein TIGRFAM: ybaK/ebsC protein~PFAM: YbaK/prolyl-tRNA synthetase associated region~KEGG: hch:HCH_01964 hypothetical protein gene gene6361 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6293 Amir_6294 Amir_6294 Amir_6294 7382135 7382749 - conserved hypothetical protein KEGG: rle:pRL110093 hypothetical protein gene gene6362 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6294 Amir_6295 Amir_6295 Amir_6295 7382746 7383507 - protein of unknown function DUF159 PFAM: protein of unknown function DUF159~KEGG: dal:Dalk_1121 protein of unknown function DUF159 gene gene6363 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6295 Amir_6296 Amir_6296 Amir_6296 7383590 7384852 + 3-phosphoshikimate 1-carboxyvinyltransferase TIGRFAM: 3-phosphoshikimate 1- carboxyvinyltransferase~PFAM: EPSP synthase (3-phosphoshikimate 1- carboxyvinyltransferase)~KEGG: scl:sce3035 3-phosphoshikimate 1- carboxyvinyltransferase gene gene6364 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6296 Amir_6297 Amir_6297 Amir_6297 7384854 7385861 + GTPase EngC PFAM: GTPase EngC~KEGG: cvi:CV_2365 ribosome-associated GTPase gene gene6365 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6297 Amir_6298 Amir_6298 Amir_6298 7385998 7386375 + Glyoxalase/bleomycin resistance protein/dioxygenase PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase~KEGG: slo:Shew_2437 hypothetical protein gene gene6366 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6298 Amir_6299 Amir_6299 Amir_6299 7386397 7386906 - hypothetical protein gene gene6367 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6299 Amir_6300 Amir_6300 Amir_6300 7386903 7388291 - acyltransferase%2C WS/DGAT/MGAT TIGRFAM: acyltransferase%2C WS/DGAT/MGAT~PFAM: protein of unknown function UPF0089~KEGG: maq:Maqu_3067 hypothetical protein gene gene6368 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6300 Amir_6301 Amir_6301 Amir_6301 7388301 7388972 - Mn2+dependent serine/threonine protein kinase PFAM: aminoglycoside phosphotransferase~KEGG: mch:Mchl_2091 aminoglycoside phosphotransferase gene gene6369 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6301 Amir_6302 Amir_6302 Amir_6302 7389059 7389805 + RNA methyltransferase%2C TrmH family%2C group 3 TIGRFAM: RNA methyltransferase%2C TrmH family%2C group 3~PFAM: tRNA/rRNA methyltransferase (SpoU)%3B RNA 2-O ribose methyltransferase substrate binding~KEGG: sde:Sde_1711 von Willebrand factor%2C type A gene gene6370 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6302 Amir_6303 Amir_6303 Amir_6303 7390196 7390597 - HAD-superfamily hydrolase%2C subfamily IA%2C variant 3 TIGRFAM: HAD-superfamily hydrolase%2C subfamily IA%2C variant 3~KEGG: ACAD10%3B acyl-Coenzyme A dehydrogenase family%2C member 10%3B K11729 acyl-CoA dehydrogenase family member 10 gene gene6371 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6303 Amir_6304 Amir_6304 Amir_6304 7390663 7391040 + hypothetical protein gene gene6372 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6304 Amir_6305 Amir_6305 Amir_6305 7391532 7394459 - preprotein translocase%2C SecA subunit TIGRFAM: preprotein translocase%2C SecA subunit~PFAM: SecA DEAD domain protein%3B SecA Wing and Scaffold%3B SecA preprotein cross-linking region~KEGG: pca:Pcar_2323 preprotein translocase subunit SecA gene gene6373 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6305 Amir_6306 Amir_6306 Amir_6306 7395702 7396370 - sigma 54 modulation protein/ribosomal protein S30EA TIGRFAM: ribosomal subunit interface protein~PFAM: sigma 54 modulation protein/ribosomal protein S30EA~KEGG: probable plastid-specific ribosomal protein PSRP-1 precursor gene gene6374 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6306 Amir_6307 Amir_6307 Amir_6307 7396812 7397432 - phosphoribosyltransferase KEGG: acp:A2cp1_0258 phosphoribosyltransferase gene gene6375 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6307 Amir_6308 Amir_6308 Amir_6308 7397640 7399373 - hypothetical protein KEGG: efe:EFER_0542 adhesin for cattle intestine colonization gene gene6376 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6308 Amir_6309 Amir_6309 Amir_6309 7399370 7401775 - histidine kinase PFAM: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B histidine kinase HAMP region domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B histidine kinase HAMP region domain protein~KEGG: gbm:Gbem_2673 heavy metal sensor signal transduction histidine kinase gene gene6377 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6309 Amir_6310 Amir_6310 Amir_6310 7401810 7402595 - two component transcriptional regulator%2C winged helix family PFAM: response regulator receiver%3B transcriptional regulator domain protein~SMART: response regulator receiver~KEGG: sat:SYN_00981 response regulator gene gene6378 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6310 Amir_6311 Amir_6311 Amir_6311 7402688 7403320 - thymidylate kinase PFAM: thymidylate kinase~KEGG: rce:RC1_2683 thymidylate kinase%2C putative gene gene6379 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6311 Amir_6312 Amir_6312 Amir_6312 7403398 7403622 - protein of unknown function DUF397 PFAM: protein of unknown function DUF397 gene gene6380 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6312 Amir_6313 Amir_6313 Amir_6313 7403643 7404527 - hypothetical protein gene gene6381 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6313 Amir_6314 Amir_6314 Amir_6314 7404791 7405072 + pseudogene gene6382 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6314 Amir_6315 Amir_6315 Amir_6315 7405071 7405238 + hypothetical protein gene gene6383 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6315 Amir_6316 Amir_6316 Amir_6316 7405310 7407139 + asparagine synthase PFAM: asparagine synthase~KEGG: swi:Swit_4548 asparagine synthase gene gene6384 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6316 Amir_6317 Amir_6317 Amir_6317 7407136 7407900 + hypothetical protein KEGG: ank:AnaeK_0240 FAD dependent oxidoreductase gene gene6385 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6317 Amir_6318 Amir_6318 Amir_6318 7407897 7408487 + GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: vch:VCA0417 acetyltransferase%2C putative gene gene6386 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6318 Amir_6319 Amir_6319 Amir_6319 7408492 7409088 - pseudogene gene6387 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6319 Amir_6320 Amir_6320 Amir_6320 7409428 7410336 + hypothetical protein gene gene6388 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6320 Amir_6321 Amir_6321 Amir_6321 7410398 7411870 - adenosylhomocysteinase KEGG: afw:Anae109_0161 S-adenosyl-L-homocysteine hydrolase~TIGRFAM: adenosylhomocysteinase~PFAM: S-adenosyl-L-homocysteine hydrolase%3B S- adenosyl-L-homocysteine hydrolase%2C NAD binding gene gene6389 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6321 Amir_6322 Amir_6322 Amir_6322 7412046 7413557 - amino acid permease-associated region PFAM: amino acid permease-associated region%3B aromatic amino acid permease~KEGG: rpi:Rpic_1962 amino acid permease-associated region gene gene6390 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6322 Amir_6323 Amir_6323 Amir_6323 7413627 7414544 - cation diffusion facilitator family transporter TIGRFAM: cation diffusion facilitator family transporter~PFAM: cation efflux protein~KEGG: hch:HCH_04023 Co/Zn/Cd cation transporter gene gene6391 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6323 Amir_6324 Amir_6324 Amir_6324 7414605 7415828 - mannose-6-phosphate isomerase%2C class I TIGRFAM: mannose-6-phosphate isomerase%2C class I~PFAM: mannose-6-phosphate isomerase type I~KEGG: scl:sce4699 mannose-6-phosphate isomerase gene gene6392 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6324 Amir_6325 Amir_6325 Amir_6325 7415949 7417025 - hypothetical protein KEGG: mch:Mchl_4903 double-strand break repair protein AddB gene gene6393 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6325 Amir_6326 Amir_6326 Amir_6326 7417032 7417223 - protein of unknown function DUF343 PFAM: protein of unknown function DUF343~KEGG: mes:Meso_3270 protein of unknown function DUF343 gene gene6394 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6326 Amir_6327 Amir_6327 Amir_6327 7417251 7418603 - Phosphomannomutase PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I%3B phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III%3B phosphoglucomutase/phosphomannomutase%3B phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II~KEGG: sgl:SG1115 phosphomannomutase gene gene6395 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6327 Amir_6328 Amir_6328 Amir_6328 7418682 7419032 - hypothetical protein gene gene6396 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6328 Amir_6329 Amir_6329 Amir_6329 7419187 7419639 + hypothetical protein KEGG: acp:A2cp1_1564 protein of unknown function DUF1025 gene gene6397 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6329 Amir_6330 Amir_6330 Amir_6330 7420144 7424043 - glycosyltransferase-like protein KEGG: GF17743 gene product from transcript GF17743- RA gene gene6398 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6330 Amir_6331 Amir_6331 Amir_6331 7424259 7424567 - transcription factor WhiB PFAM: transcription factor WhiB gene gene6399 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6331 Amir_6332 Amir_6332 Amir_6332 7424894 7425574 + peptidase M50 PFAM: peptidase M50~KEGG: ccs:CCNA_03492 transporter gene gene6400 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6332 Amir_6333 Amir_6333 Amir_6333 7425600 7426565 + LPPG domain protein containing protein TIGRFAM: LPPG domain protein containing protein~PFAM: protein of unknown function UPF0052 and CofD~KEGG: rpb:RPB_4407 LPPG:FO 2-phospho-L-lactate transferase gene gene6401 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6333 Amir_6334 Amir_6334 Amir_6334 7426558 7427943 + F420-dependent oxidoreductase TIGRFAM: F420-dependent oxidoreductase~PFAM: protein of unknown function DUF129%3B nitroreductase~KEGG: pde:Pden_1118 F420-dependent oxidoreductase%2C putative gene gene6402 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6334 Amir_6335 Amir_6335 Amir_6335 7427946 7428491 + NUDIX hydrolase PFAM: NUDIX hydrolase~KEGG: sml:Smlt2194 hypothetical protein gene gene6403 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6335 Amir_6336 Amir_6336 Amir_6336 7428895 7429839 - 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase-like protein KEGG: transcriptional regulator%2C AraC family gene gene6404 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6336 Amir_6337 Amir_6337 Amir_6337 7429844 7430923 - Nucleotidyl transferase PFAM: Nucleotidyl transferase%3B transferase hexapeptide repeat containing protein~KEGG: pca:Pcar_2958 mannose-1-phosphate guanyltransferase gene gene6405 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6337 Amir_6338 Amir_6338 Amir_6338 7431076 7431465 + hypothetical protein KEGG: hypothetical protein gene gene6406 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6338 Amir_6339 Amir_6339 Amir_6339 7431664 7432521 - glycosyl transferase family 2 PFAM: glycosyl transferase family 2~KEGG: ppg:PputGB1_2720 glycosyl transferase family protein gene gene6407 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6339 Amir_6340 Amir_6340 Amir_6340 7433070 7434203 - glycosyl transferase group 1 PFAM: glycosyl transferase group 1~KEGG: pfo:Pfl01_5687 glycosyl transferase%2C group 1 gene gene6408 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6340 Amir_6341 Amir_6341 Amir_6341 7434377 7435441 - glycosyl transferase group 1 PFAM: glycosyl transferase group 1~KEGG: afw:Anae109_1409 glycosyl transferase group 1 gene gene6409 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6341 Amir_6342 Amir_6342 Amir_6342 7435587 7436489 + glycosyl transferase family 2 PFAM: glycosyl transferase family 2~KEGG: pzu:PHZ_c3342 glycosyl transferase gene gene6410 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6342 Amir_6343 Amir_6343 Amir_6343 7436521 7436904 + hypothetical protein gene gene6411 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6343 Amir_6344 Amir_6344 Amir_6344 7437033 7439501 + glycosyl transferase family 2 PFAM: glycosyl transferase family 2%3B glycosyl transferase group 1~KEGG: dal:Dalk_0014 glycosyl transferase family 2 gene gene6412 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6344 Amir_6345 Amir_6345 Amir_6345 7439494 7440588 + glycosyl transferase group 1 PFAM: glycosyl transferase group 1~KEGG: afw:Anae109_1409 glycosyl transferase group 1 gene gene6413 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6345 Amir_6346 Amir_6346 Amir_6346 7440994 7441884 - dTDP-4-dehydrorhamnose reductase KEGG: gme:Gmet_2472 dTDP-4-dehydrorhamnose reductase~TIGRFAM: dTDP-4-dehydrorhamnose reductase~PFAM: dTDP-4-dehydrorhamnose reductase%3B 3-beta hydroxysteroid dehydrogenase/isomerase%3B Male sterility domain%3B NAD-dependent epimerase/dehydratase gene gene6414 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6346 Amir_6347 Amir_6347 Amir_6347 7441884 7442876 - dTDP-glucose 4%2C6-dehydratase TIGRFAM: dTDP-glucose 4%2C6-dehydratase~PFAM: NAD-dependent epimerase/dehydratase%3B Male sterility domain%3B 3-beta hydroxysteroid dehydrogenase/isomerase%3B polysaccharide biosynthesis protein CapD%3B short-chain dehydrogenase/reductase SDR%3B dTDP-4-dehydrorhamnose reductase~KEGG: dvm:DvMF_0141 dTDP-glucose 4%2C6-dehydratase gene gene6415 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6347 Amir_6348 Amir_6348 Amir_6348 7443051 7444604 + cell envelope-related transcriptional attenuator TIGRFAM: cell envelope-related function transcriptional attenuator%2C LytR/CpsA family~PFAM: cell envelope-related transcriptional attenuator~KEGG: bat:BAS5047 LytR family transcription antiterminator gene gene6416 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6348 Amir_6349 Amir_6349 Amir_6349 7444683 7445915 + cell envelope-related transcriptional attenuator TIGRFAM: cell envelope-related function transcriptional attenuator%2C LytR/CpsA family~PFAM: cell envelope-related transcriptional attenuator~KEGG: hypothetical protein gene gene6417 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6349 Amir_6350 Amir_6350 Amir_6350 7445926 7446618 + hypothetical protein KEGG: rpd:RPD_3317 AMP-dependent synthetase and ligase gene gene6418 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6350 Amir_6351 Amir_6351 Amir_6351 7446711 7447136 - DoxX family protein PFAM: DoxX family protein~KEGG: aba:Acid345_2953 DoxX gene gene6419 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6351 Amir_6352 Amir_6352 Amir_6352 7447261 7447623 + transcriptional regulator%2C ArsR family PFAM: regulatory protein ArsR~SMART: regulatory protein ArsR~KEGG: sme:SM_b20608 putative transcriptional regulator%2C ArsR family protein gene gene6420 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6352 Amir_6353 Amir_6353 Amir_6353 7447745 7447957 + hypothetical protein gene gene6421 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6353 Amir_6354 Amir_6354 Amir_6354 7447954 7448310 + hypothetical protein gene gene6422 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6354 Amir_6355 Amir_6355 Amir_6355 7448360 7448434 - pseudogene gene6423 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6355 Amir_6356 Amir_6356 Amir_6356 7448989 7450209 - transcriptional regulator%2C XRE family SMART: helix-turn-helix domain protein gene gene6424 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6356 Amir_6357 Amir_6357 Amir_6357 7450334 7450567 + hypothetical protein gene gene6425 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6357 Amir_6358 Amir_6358 Amir_6358 7450681 7451064 - transcriptional regulator%2C GntR family PFAM: regulatory protein GntR HTH~SMART: regulatory protein GntR HTH~KEGG: met:M446_0773 GntR family transcriptional regulator gene gene6426 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6358 Amir_6359 Amir_6359 Amir_6359 7451214 7451645 + hypothetical protein gene gene6427 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6359 Amir_6360 Amir_6360 Amir_6360 7451658 7451963 + hypothetical protein gene gene6428 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6360 Amir_6361 Amir_6361 Amir_6361 7452261 7453736 + cell divisionFtsK/SpoIIIE PFAM: cell divisionFtsK/SpoIIIE~KEGG: pha:PSHAb0091 cell divisionFtsK/SpoIIIE domain-containing protein gene gene6429 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6361 Amir_6362 Amir_6362 Amir_6362 7453733 7455400 + hypothetical protein gene gene6430 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6362 Amir_6363 Amir_6363 Amir_6363 7455414 7455593 + hypothetical protein gene gene6431 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6363 Amir_6364 Amir_6364 Amir_6364 7455630 7456826 + integrase family protein PFAM: integrase family protein~KEGG: bce:BC1272 DNA integration/recombination/invertion protein gene gene6432 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6364 Amir_6365 Amir_6365 Amir_6365 7456873 7458351 - hypothetical protein KEGG: dps:DP2013 hypothetical protein gene gene6433 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6365 Amir_6366 Amir_6366 Amir_6366 7458754 7459917 - acyl-CoA dehydrogenase domain protein PFAM: acyl-CoA dehydrogenase domain protein%3B Acyl- CoA dehydrogenase type 2 domain~KEGG: bcb:BCB4264_A5464 acyl-CoA dehydrogenase gene gene6434 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6366 Amir_6367 Amir_6367 Amir_6367 7459952 7460473 - phosphoribosylaminoimidazole carboxylase%2C catalytic subunit KEGG: predicted protein%3B K01588 phosphoribosylaminoimidazole carboxylase catalytic subunit~TIGRFAM: phosphoribosylaminoimidazole carboxylase%2C catalytic subunit~PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase gene gene6435 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6367 Amir_6368 Amir_6368 Amir_6368 7460470 7461660 - phosphoribosylaminoimidazole carboxylase%2C ATPase subunit KEGG: hypothetical protein~TIGRFAM: phosphoribosylaminoimidazole carboxylase%2C ATPase subunit~PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp%3B phosphoribosylglycinamide synthetase gene gene6436 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6368 Amir_6369 Amir_6369 Amir_6369 7461774 7462787 - hypothetical protein gene gene6437 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6369 Amir_6370 Amir_6370 Amir_6370 7462784 7463635 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: shw:Sputw3181_4019 ABC transporter related gene gene6438 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6370 Amir_6371 Amir_6371 Amir_6371 7463632 7464015 - transcriptional regulator%2C GntR family PFAM: regulatory protein GntR HTH~SMART: regulatory protein GntR HTH~KEGG: sus:Acid_1594 GntR family transcriptional regulator gene gene6439 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6371 Amir_6372 Amir_6372 Amir_6372 7464280 7465503 - Tetratricopeptide TPR_4 PFAM: Tetratricopeptide TPR_4~KEGG: hypothetical protein LOC682657 gene gene6440 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6372 Amir_6373 Amir_6373 Amir_6373 7465833 7466693 + hypothetical protein gene gene6441 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6373 Amir_6374 Amir_6374 Amir_6374 7466686 7466871 + protein of unknown function DUF397 PFAM: protein of unknown function DUF397 gene gene6442 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6374 Amir_6375 Amir_6375 Amir_6375 7466991 7467410 - hypothetical protein gene gene6443 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6375 Amir_6376 Amir_6376 Amir_6376 7467509 7468306 - hypothetical protein KEGG: hypothetical protein gene gene6444 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6376 Amir_6377 Amir_6377 Amir_6377 7468403 7471081 + RNA polymerase%2C sigma-24 subunit%2C ECF subfamily TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family~PFAM: sigma-70 region 2 domain protein%3B Sigma-70 region 4 type 2~KEGG: MUC17%3B mucin 17%2C cell surface associated gene gene6445 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6377 Amir_6378 Amir_6378 Amir_6378 7471237 7471791 + GtrA family protein PFAM: GtrA family protein~KEGG: GtrA family protein gene gene6446 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6378 Amir_6379 Amir_6379 Amir_6379 7471863 7472705 - histidinol-phosphate phosphatase TIGRFAM: histidinol-phosphate phosphatase~PFAM: inositol monophosphatase~KEGG: ade:Adeh_1287 histidinol-phosphate phosphatase gene gene6447 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6379 Amir_6380 Amir_6380 Amir_6380 7472738 7473409 + two component transcriptional regulator%2C winged helix family PFAM: response regulator receiver%3B transcriptional regulator domain protein~SMART: response regulator receiver~KEGG: mxa:MXAN_5313 DNA-binding response regulator gene gene6448 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6380 Amir_6381 Amir_6381 Amir_6381 7473409 7474683 + histidine kinase PFAM: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B histidine kinase HAMP region domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein~KEGG: ade:Adeh_2915 periplasmic sensor signal transduction histidine kinase gene gene6449 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6381 Amir_6382 Amir_6382 Amir_6382 7475478 7475918 - hypothetical protein KEGG: predicted gene%2C 100042292 gene gene6450 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6382 Amir_6383 Amir_6383 Amir_6383 7475915 7478260 - hypothetical protein KEGG: Hypothetical protein CBG02561 gene gene6451 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6383 Amir_6384 Amir_6384 Amir_6384 7478283 7479902 + PE-PGRS family protein KEGG: ade:Adeh_1681 PE-PGRS family protein gene gene6452 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6384 Amir_6385 Amir_6385 Amir_6385 7479854 7480162 - hypothetical protein gene gene6453 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6385 Amir_6386 Amir_6386 Amir_6386 7480159 7480650 - hypothetical protein gene gene6454 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6386 Amir_6387 Amir_6387 Amir_6387 7480806 7481735 - pyruvate carboxyltransferase PFAM: pyruvate carboxyltransferase~KEGG: rce:RC1_0377 3-hydroxy-3-methylglutaryl-CoA lyase gene gene6455 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6387 Amir_6388 Amir_6388 Amir_6388 7482054 7482566 - membrane-flanked domain protein PFAM: membrane-flanked domain~KEGG: kpe:KPK_2129 hypothetical protein gene gene6456 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6388 Amir_6389 Amir_6389 Amir_6389 7482599 7483360 - biotin/acetyl-CoA-carboxylase ligase TIGRFAM: biotin/acetyl-CoA-carboxylase ligase~PFAM: biotin/lipoate A/B protein ligase%3B biotin protein ligase domain protein~KEGG: ade:Adeh_2388 biotin--acetyl-CoA-carboxylase ligase gene gene6457 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6389 Amir_6390 Amir_6390 Amir_6390 7483647 7485278 + carboxyl transferase PFAM: carboxyl transferase~KEGG: sus:Acid_1492 carboxyl transferase gene gene6458 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6390 Amir_6391 Amir_6391 Amir_6391 7485275 7485496 + hypothetical protein gene gene6459 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6391 Amir_6392 Amir_6392 Amir_6392 7485509 7485913 - hypothetical protein gene gene6460 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6392 Amir_6393 Amir_6393 Amir_6393 7486664 7487284 + maf protein TIGRFAM: maf protein~PFAM: Maf family protein~KEGG: afw:Anae109_1366 maf protein gene gene6461 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6393 Amir_6394 Amir_6394 Amir_6394 7487724 7489064 + sodium:dicarboxylate symporter PFAM: sodium:dicarboxylate symporter~KEGG: mes:Meso_3163 sodium:dicarboxylate symporter gene gene6462 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6394 Amir_6395 Amir_6395 Amir_6395 7489135 7489833 - hypothetical protein gene gene6463 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6395 Amir_6396 Amir_6396 Amir_6396 7489992 7491758 + Carbamoyl-phosphate synthase L chain ATP- binding PFAM: Carbamoyl-phosphate synthase L chain ATP- binding%3B biotin carboxylase domain protein%3B biotin/lipoyl attachment domain-containing protein%3B Carbamoyl-phosphate synthetase large chain domain protein~KEGG: biotin carboxylase%3B K01946 biotin carboxylase gene gene6464 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6396 Amir_6397 Amir_6397 Amir_6397 7491768 7492154 + protein of unknown function DUF1707 PFAM: protein of unknown function DUF1707 gene gene6465 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6397 Amir_6398 Amir_6398 Amir_6398 7492151 7493026 + HAD-superfamily hydrolase%2C subfamily IA%2C variant 3 TIGRFAM: HAD-superfamily hydrolase%2C subfamily IA%2C variant 3~PFAM: Haloacid dehalogenase domain protein hydrolase~KEGG: bja:bll1358 putative hydrolase gene gene6466 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6398 Amir_6399 Amir_6399 Amir_6399 7493195 7493788 + hypothetical protein gene gene6467 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6399 Amir_6400 Amir_6400 Amir_6400 7493880 7494260 + hypothetical protein gene gene6468 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6400 Amir_6401 Amir_6401 Amir_6401 7494287 7495552 + hypothetical protein KEGG: mgm:Mmc1_2179 putative outer membrane adhesin like proteiin gene gene6469 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6401 Amir_6402 Amir_6402 Amir_6402 7495549 7496355 + hypothetical protein gene gene6470 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6402 Amir_6403 Amir_6403 Amir_6403 7496622 7497083 - AIG2 family protein PFAM: AIG2 family protein~KEGG: mpo:Mpop_3184 AIG2 family protein gene gene6471 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6403 Amir_6404 Amir_6404 Amir_6404 7497229 7498632 + pyridine nucleotide-disulphide oxidoreductase dimerization region PFAM: pyridine nucleotide-disulphide oxidoreductase dimerization region%3B FAD-dependent pyridine nucleotide- disulphide oxidoreductase%3B FAD dependent oxidoreductase%3B HI0933 family protein~KEGG: bha:BH1825 dihydrolipoamide dehydrogenase gene gene6472 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6404 Amir_6405 Amir_6405 Amir_6405 7499068 7499745 - two component transcriptional regulator%2C LuxR family PFAM: response regulator receiver%3B regulatory protein LuxR%3B Sigma-70 region 4 type 2%3B Bacterio-opsin activator HTH domain protein~SMART: response regulator receiver%3B regulatory protein LuxR~KEGG: scl:sce5431 two-component system response regulator gene gene6473 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6405 Amir_6406 Amir_6406 Amir_6406 7499742 7500923 - histidine kinase PFAM: histidine kinase dimerization and phosphoacceptor region%3B ATP-binding region ATPase domain protein~KEGG: scl:sce5432 putative two-component system sensor kinase gene gene6474 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6406 Amir_6407 Amir_6407 Amir_6407 7501129 7502058 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: mmr:Mmar10_1823 ABC transporter related gene gene6475 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6407 Amir_6408 Amir_6408 Amir_6408 7502058 7502921 + hypothetical protein KEGG: cak:Caul_1641 hypothetical protein gene gene6476 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6408 Amir_6409 Amir_6409 Amir_6409 7502977 7504491 - glycerol kinase TIGRFAM: glycerol kinase~PFAM: carbohydrate kinase FGGY~KEGG: azc:AZC_2710 glycerol kinase gene gene6477 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6409 Amir_6410 Amir_6410 Amir_6410 7504523 7505263 - major intrinsic protein PFAM: major intrinsic protein~KEGG: pha:PSHAb0552 putative glycerol diffusion channel gene gene6478 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6410 Amir_6411 Amir_6411 Amir_6411 7505482 7507221 + FAD dependent oxidoreductase PFAM: FAD dependent oxidoreductase%3B monooxygenase FAD-binding~KEGG: vei:Veis_2018 FAD dependent oxidoreductase gene gene6479 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6411 Amir_6412 Amir_6412 Amir_6412 7507398 7508255 + hypothetical protein KEGG: rpa:RPA3963 hypothetical protein gene gene6480 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6412 Amir_6413 Amir_6413 Amir_6413 7508426 7508851 + hypothetical protein gene gene6481 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6413 Amir_6414 Amir_6414 Amir_6414 7508949 7510220 - amidohydrolase KEGG: acr:Acry_1887 amidohydrolase~TIGRFAM: amidohydrolase~PFAM: peptidase M20 gene gene6482 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6414 Amir_6415 Amir_6415 Amir_6415 7510217 7511392 - amidohydrolase TIGRFAM: amidohydrolase~PFAM: peptidase M20%3B peptidase dimerization domain protein~KEGG: pla:Plav_2614 amidohydrolase gene gene6483 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6415 Amir_6416 Amir_6416 Amir_6416 7511743 7512081 - hypothetical protein KEGG: GL26851 gene product from transcript GL26851- RA gene gene6484 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6416 Amir_6417 Amir_6417 Amir_6417 7512148 7513134 - LAO/AO transport system ATPase TIGRFAM: LAO/AO transport system ATPase~PFAM: ArgK protein~KEGG: rru:Rru_A2478 arginine/ornithine transport system ATPase gene gene6485 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6417 Amir_6418 Amir_6418 Amir_6418 7513127 7515316 - methylmalonyl-CoA mutase%2C large subunit KEGG: rru:Rru_A2479 methylmalonyl-CoA mutase~TIGRFAM: methylmalonyl-CoA mutase%2C large subunit~PFAM: methylmalonyl-CoA mutase%3B cobalamin B12- binding domain protein gene gene6486 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6418 Amir_6419 Amir_6419 Amir_6419 7515313 7517094 - Methylmalonyl-CoA mutase PFAM: methylmalonyl-CoA mutase~KEGG: rru:Rru_A2480 methylmalonyl-CoA mutase gene gene6487 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6419 Amir_6420 Amir_6420 Amir_6420 7517538 7519355 + serine/threonine protein kinase PFAM: Serine/threonine protein kinase-related%3B tyrosine protein kinase~SMART: serine/threonine protein kinase%3B tyrosine protein kinase~KEGG: pau:PA14_00875 serine/threonine protein kinase PpkA gene gene6488 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6420 Amir_6421 Amir_6421 Amir_6421 7519395 7520207 + purine nucleotide phosphorylase TIGRFAM: purine nucleotide phosphorylase%3B inosine guanosine and xanthosine phosphorylase family~PFAM: purine or other phosphorylase family 1~KEGG: scl:sce5862 hypothetical protein gene gene6489 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6421 Amir_6422 Amir_6422 Amir_6422 7520204 7521832 + Phosphomannomutase PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I%3B phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III%3B phosphoglucomutase/phosphomannomutase%3B phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II~KEGG: scl:sce4837 putative phosphoglucomutase/phosphomannomutase gene gene6490 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6422 Amir_6423 Amir_6423 Amir_6423 7521867 7522190 - hypothetical protein gene gene6491 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6423 Amir_6424 Amir_6424 Amir_6424 7522246 7522575 - hypothetical protein KEGG: acp:A2cp1_4175 general secretory system II protein E domain protein gene gene6492 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6424 Amir_6425 Amir_6425 Amir_6425 7522875 7523270 - transcriptional regulator%2C MerR family PFAM: regulatory protein MerR%3B Transcription regulator MerR DNA binding~SMART: regulatory protein MerR~KEGG: mag:amb3964 transcriptional regulator gene gene6493 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6425 Amir_6426 Amir_6426 Amir_6426 7523386 7523769 - filamentation induced by cAMP protein Fic PFAM: filamentation induced by cAMP protein Fic~KEGG: acp:A2cp1_3061 death-on-curing family protein gene gene6494 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6426 Amir_6427 Amir_6427 Amir_6427 7523810 7524010 - CopG domain protein DNA-binding domain protein PFAM: CopG domain protein DNA-binding domain protein~KEGG: tgr:Tgr7_2434 CopG domain protein DNA-binding domain protein gene gene6495 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6427 Amir_6428 Amir_6428 Amir_6428 7524033 7524686 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: pla:Plav_2655 TetR family transcriptional regulator gene gene6496 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6428 Amir_6429 Amir_6429 Amir_6429 7525128 7525751 - uracil phosphoribosyltransferase TIGRFAM: uracil phosphoribosyltransferase~PFAM: phosphoribosyltransferase~KEGG: rde:RD1_3976 uracil phosphoribosyltransferase gene gene6497 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6429 Amir_6430 Amir_6430 Amir_6430 7525948 7528944 + pentapeptide repeat protein PFAM: pentapeptide repeat protein~KEGG: scl:sce3623 hypothetical protein gene gene6498 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6430 Amir_6431 Amir_6431 Amir_6431 7529075 7534375 + WD-40 repeat protein PFAM: WD-40 repeat protein%3B pentapeptide repeat protein~SMART: WD-40 repeat protein~KEGG: scl:sce3623 hypothetical protein gene gene6499 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6431 Amir_6432 Amir_6432 Amir_6432 7534379 7535362 + oxidoreductase domain protein PFAM: oxidoreductase domain protein%3B Semialdehyde dehydrogenase NAD - binding%3B Oxidoreductase domain~KEGG: hypothetical protein gene gene6500 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6432 Amir_6433 Amir_6433 Amir_6433 7535359 7535610 - hypothetical protein gene gene6501 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6433 Amir_6434 Amir_6434 Amir_6434 7535679 7536518 + helix-turn-helix domain protein SMART: helix-turn-helix domain protein~KEGG: met:M446_4768 XRE family transcriptional regulator gene gene6502 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6434 Amir_6435 Amir_6435 Amir_6435 7536532 7536705 + protein of unknown function DUF397 PFAM: protein of unknown function DUF397 gene gene6503 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6435 Amir_6436 Amir_6436 Amir_6436 7536751 7537407 + protein of unknown function DUF1707 PFAM: protein of unknown function DUF1707~KEGG: pha:PSHAa0324 hypothetical protein gene gene6504 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6436 Amir_6437 Amir_6437 Amir_6437 7537472 7539619 - NB-ARC domain protein PFAM: NB-ARC domain protein~KEGG: scl:sce6858 hypothetical protein gene gene6505 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6437 Amir_6438 Amir_6438 Amir_6438 7539624 7540136 - hypothetical protein gene gene6506 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6438 Amir_6439 Amir_6439 Amir_6439 7540111 7540347 - hypothetical protein gene gene6507 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6439 Amir_6440 Amir_6440 Amir_6440 7540530 7540958 - hypothetical protein gene gene6508 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6440 Amir_6441 Amir_6441 Amir_6441 7541203 7541526 + hypothetical protein gene gene6509 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6441 Amir_6442 Amir_6442 Amir_6442 7541532 7542710 + NLP/P60 protein PFAM: NLP/P60 protein~KEGG: bpt:Bpet2252 hypothetical protein gene gene6510 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6442 Amir_6443 Amir_6443 Amir_6443 7542715 7543089 + hypothetical protein gene gene6511 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6443 Amir_6444 Amir_6444 Amir_6444 7543086 7545728 + Chromosome segregation ATPase-like protein KEGG: mgm:Mmc1_2162 TPR repeat-containing protein gene gene6512 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6444 Amir_6445 Amir_6445 Amir_6445 7545811 7547025 + hypothetical protein gene gene6513 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6445 Amir_6446 Amir_6446 Amir_6446 7547102 7548172 - adenosine deaminase KEGG: afw:Anae109_0100 adenosine deaminase~TIGRFAM: adenosine deaminase~PFAM: adenosine/AMP deaminase gene gene6514 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6446 Amir_6447 Amir_6447 Amir_6447 7548446 7549672 + hypothetical protein KEGG: CG33251 gene gene6515 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6447 Amir_6448 Amir_6448 Amir_6448 7550003 7550587 + hypothetical protein gene gene6516 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6448 Amir_6449 Amir_6449 Amir_6449 7550646 7551920 - pyrimidine-nucleoside phosphorylase KEGG: mxa:MXAN_5710 pyrimidine-nucleoside phosphorylase~TIGRFAM: pyrimidine-nucleoside phosphorylase~PFAM: glycosyl transferase family 3%3B Pyrimidine nucleoside phosphorylase domain%3B Glycosyl transferase%2C family 3-like gene gene6517 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6449 Amir_6450 Amir_6450 Amir_6450 7551917 7552360 - CMP/dCMP deaminase zinc-binding PFAM: CMP/dCMP deaminase zinc-binding~KEGG: nar:Saro_0145 cytidine deaminase gene gene6518 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6450 Amir_6451 Amir_6451 Amir_6451 7552353 7553618 - inner-membrane translocator PFAM: inner-membrane translocator~KEGG: bcz:BCZK3548 ABC transporter%2C permease gene gene6519 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6451 Amir_6452 Amir_6452 Amir_6452 7553615 7554688 - inner-membrane translocator PFAM: inner-membrane translocator~KEGG: scl:sce7757 ABC transporter permease gene gene6520 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6452 Amir_6453 Amir_6453 Amir_6453 7554688 7556232 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: scl:sce7755 sugar ABC transporter%2C ATP- binding protein gene gene6521 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6453 Amir_6454 Amir_6454 Amir_6454 7556303 7557451 - basic membrane lipoprotein PFAM: basic membrane lipoprotein~KEGG: smd:Smed_3416 basic membrane lipoprotein gene gene6522 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6454 Amir_6455 Amir_6455 Amir_6455 7557993 7558517 + hypothetical protein KEGG: avhD4%3B conjugative coupling protein%3B K03205 type IV secretion system protein VirD4 gene gene6523 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6455 Amir_6456 Amir_6456 Amir_6456 7558574 7560247 + hypothetical protein KEGG: mucin-associated surface protein (MASP) gene gene6524 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6456 Amir_6457 Amir_6457 Amir_6457 7560273 7565210 - hypothetical protein KEGG: eln1%3B tropoelastin 1 gene gene6525 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6457 Amir_6458 Amir_6458 Amir_6458 7565242 7593831 + hypothetical protein KEGG: Muc19%3B mucin 19 gene gene6526 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6458 Amir_6459 Amir_6459 Amir_6459 7593828 7595096 + hypothetical protein gene gene6527 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6459 Amir_6460 Amir_6460 Amir_6460 7595549 7595839 - hypothetical protein KEGG: GK19428 gene product from transcript GK19428- RA gene gene6528 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6460 Amir_6461 Amir_6461 Amir_6461 7595856 7599962 + hypothetical protein KEGG: ank:AnaeK_3854 tetratricopeptide TPR_2 repeat protein gene gene6529 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6461 Amir_6462 Amir_6462 Amir_6462 7600183 7600605 + succinate dehydrogenase%2C cytochrome b556 subunit TIGRFAM: succinate dehydrogenase%2C cytochrome b556 subunit~PFAM: succinate dehydrogenase cytochrome b subunit~KEGG: jan:Jann_3968 succinate dehydrogenase subunit C gene gene6530 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6462 Amir_6463 Amir_6463 Amir_6463 7600608 7601024 + Succinate dehydrogenase hydrophobic anchor subunit-like protein KEGG: eta:ETA_23070 succinate dehydrogenase hydrophobic membrane anchor protein gene gene6531 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6463 Amir_6464 Amir_6464 Amir_6464 7601047 7602798 + succinate dehydrogenase or fumarate reductase%2C flavoprotein subunit KEGG: sfu:Sfum_2104 succinate dehydrogenase%2C flavoprotein subunit~TIGRFAM: succinate dehydrogenase or fumarate reductase%2C flavoprotein subunit%3B succinate dehydrogenase%2C flavoprotein subunit~PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein%3B FAD dependent oxidoreductase gene gene6532 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6464 Amir_6465 Amir_6465 Amir_6465 7602798 7603580 + succinate dehydrogenase and fumarate reductase iron-sulfur protein TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein~KEGG: sfu:Sfum_2103 succinate dehydrogenase and fumarate reductase iron-sulfur protein gene gene6533 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6465 Amir_6466 Amir_6466 Amir_6466 7603854 7605863 - Serine-type D-Ala-D-Ala carboxypeptidase PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1~KEGG: rpc:RPC_4073 serine-type D-Ala-D-Ala carboxypeptidase gene gene6534 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6466 Amir_6467 Amir_6467 Amir_6467 7605963 7606190 + hypothetical protein gene gene6535 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6467 Amir_6468 Amir_6468 Amir_6468 7606219 7606566 + hypothetical protein gene gene6536 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6468 Amir_6469 Amir_6469 Amir_6469 7606724 7607743 - ribonuclease TIGRFAM: ribonuclease~PFAM: ribonuclease BN~KEGG: ypb:YPTS_4040 ribonuclease gene gene6537 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6469 Amir_6470 Amir_6470 Amir_6470 7607878 7608897 - tryptophanyl-tRNA synthetase KEGG: aha:AHA_3183 tryptophanyl-tRNA synthetase~TIGRFAM: tryptophanyl-tRNA synthetase~PFAM: aminoacyl-tRNA synthetase class Ib gene gene6538 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6470 Amir_6471 Amir_6471 Amir_6471 7608919 7609221 - conserved hypothetical protein KEGG: hypothetical protein gene gene6539 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6471 Amir_6472 Amir_6472 Amir_6472 7609384 7611900 - Radical SAM domain protein PFAM: Radical SAM domain protein~SMART: Elongator protein 3/MiaB/NifB~KEGG: swi:Swit_0717 FO synthase gene gene6540 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6472 Amir_6473 Amir_6473 Amir_6473 7612047 7612325 - protein of unknown function DUF86 PFAM: protein of unknown function DUF86~KEGG: azo:azo0145 hypothetical protein gene gene6541 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6473 Amir_6474 Amir_6474 Amir_6474 7612315 7612623 - DNA polymerase beta domain protein region PFAM: DNA polymerase beta domain protein region~KEGG: aba:Acid345_1968 nucleotidyltransferase gene gene6542 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6474 Amir_6475 Amir_6475 Amir_6475 7612665 7613459 - exodeoxyribonuclease III Xth KEGG: nma:NMA0348 putative nuclease~TIGRFAM: exodeoxyribonuclease III Xth%3B exodeoxyribonuclease III~PFAM: Endonuclease/exonuclease/phosphatase gene gene6543 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6475 Amir_6476 Amir_6476 Amir_6476 7613469 7613684 - hypothetical protein gene gene6544 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6476 Amir_6477 Amir_6477 Amir_6477 7613740 7614066 - hypothetical protein gene gene6545 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6477 Amir_6478 Amir_6478 Amir_6478 7614279 7615499 - isocitrate dehydrogenase%2C NADP-dependent KEGG: oca:OCAR_5440 isocitrate dehydrogenase%2C NADP- dependent~TIGRFAM: isocitrate dehydrogenase%2C NADP-dependent~PFAM: isocitrate/isopropylmalate dehydrogenase gene gene6546 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6478 Amir_6479 Amir_6479 Amir_6479 7615639 7616445 + membrane-bound metal-dependent hydrolase PFAM: membrane-bound metal-dependent hydrolase~KEGG: mag:amb4172 membrane-bound metal-dependent hydrolase gene gene6547 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6479 Amir_6480 Amir_6480 Amir_6480 7616546 7617025 + hypothetical protein gene gene6548 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6480 Amir_6481 Amir_6481 Amir_6481 7617236 7618387 + heat shock protein DnaJ domain protein PFAM: heat shock protein DnaJ domain protein~SMART: heat shock protein DnaJ domain protein~KEGG: rle:pRL110201 putative chaperone gene gene6550 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6481 Amir_6482 Amir_6482 Amir_6482 7618413 7620188 + serine/threonine protein kinase PFAM: Serine/threonine protein kinase-related%3B tyrosine protein kinase~SMART: serine/threonine protein kinase%3B tyrosine protein kinase~KEGG: mxa:MXAN_2255 serine/threonine protein kinase gene gene6551 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6482 Amir_6483 Amir_6483 Amir_6483 7620268 7620465 + hypothetical protein gene gene6552 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6483 Amir_6484 Amir_6484 Amir_6484 7620462 7620893 + hypothetical protein gene gene6553 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6484 Amir_6485 Amir_6485 Amir_6485 7621198 7621983 + ABC-type uncharacterized transport system permease component-like protein KEGG: reu:Reut_A1068 putative ABC transporter permease protein gene gene6554 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6485 Amir_6486 Amir_6486 Amir_6486 7621976 7622773 + protein of unknown function DUF990 PFAM: protein of unknown function DUF990~KEGG: aav:Aave_2071 protein of unknown function DUF990 gene gene6555 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6486 Amir_6487 Amir_6487 Amir_6487 7622770 7623723 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: scl:sce6750 ABC transporter%2C ATP-binding protein gene gene6556 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6487 Amir_6488 Amir_6488 Amir_6488 7623763 7624158 + hypothetical protein gene gene6557 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6488 Amir_6489 Amir_6489 Amir_6489 7624265 7624456 + Domain of unknown function DUF1918 PFAM: Domain of unknown function DUF1918 gene gene6558 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6489 Amir_6490 Amir_6490 Amir_6490 7624453 7625184 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: mes:Meso_0701 transcriptional regulator%2C TetR family gene gene6559 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6490 Amir_6491 Amir_6491 Amir_6491 7625682 7626476 - inositol monophosphatase PFAM: inositol monophosphatase~KEGG: mes:Meso_2748 histidinol-phosphate phosphatase%2C putative gene gene6560 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6491 Amir_6492 Amir_6492 Amir_6492 7626582 7627571 - malate dehydrogenase TIGRFAM: malate dehydrogenase~PFAM: Lactate/malate dehydrogenase~KEGG: cja:CJA_1983 malate dehydrogenase gene gene6561 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6492 Amir_6493 Amir_6493 Amir_6493 7627731 7628345 + pentapeptide repeat protein PFAM: pentapeptide repeat protein~KEGG: bca:BCE_1946 hypothetical protein gene gene6562 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6493 Amir_6494 Amir_6494 Amir_6494 7628404 7632021 - hypothetical protein KEGG: mgm:Mmc1_1473 conserved hypothetical protein%2C conserved gene gene6563 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6494 Amir_6495 Amir_6495 Amir_6495 7632103 7633626 - hypothetical protein KEGG: mag:amb0236 hypothetical protein gene gene6564 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6495 Amir_6496 Amir_6496 Amir_6496 7633623 7634093 - hypothetical protein gene gene6565 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6496 Amir_6497 Amir_6497 Amir_6497 7634285 7635277 + protein of unknown function DUF606 PFAM: protein of unknown function DUF606~KEGG: pmr:PMI1526 hypothetical protein gene gene6566 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6497 Amir_6498 Amir_6498 Amir_6498 7635285 7636151 + Methenyltetrahydrofolate cyclohydrolase PFAM: tetrahydrofolate dehydrogenase/cyclohydrolase~KEGG: pca:Pcar_2461 putative methylenetetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclohydrolase gene gene6567 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6498 Amir_6499 Amir_6499 Amir_6499 7636172 7636471 + hypothetical protein gene gene6568 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6499 Amir_6500 Amir_6500 Amir_6500 7636708 7636863 - hypothetical protein gene gene6569 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6500 Amir_6501 Amir_6501 Amir_6501 7636863 7637165 - pseudogene gene6570 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6501 Amir_6502 Amir_6502 Amir_6502 7637872 7638678 + hypothetical protein KEGG: hypothetical LOC792361 gene gene6571 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6502 Amir_6503 Amir_6503 Amir_6503 7638927 7640498 - phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase KEGG: acr:Acry_0027 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase~TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase~PFAM: AICARFT/IMPCHase bienzyme formylation region%3B MGS domain protein~SMART: AICARFT/IMPCHase bienzyme formylation region gene gene6572 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6503 Amir_6504 Amir_6504 Amir_6504 7640495 7641130 - phosphoribosylglycinamide formyltransferase TIGRFAM: phosphoribosylglycinamide formyltransferase~PFAM: formyl transferase domain protein~KEGG: hypothetical protein gene gene6573 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6504 Amir_6505 Amir_6505 Amir_6505 7641281 7643146 - AAA ATPase containing von Willebrand factor type A (vWA) domain KEGG: hypothetical protein LOC690456 gene gene6574 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6505 Amir_6506 Amir_6506 Amir_6506 7643262 7643963 - hypothetical protein KEGG: similar to AGAP004367-PA gene gene6575 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6506 Amir_6507 Amir_6507 Amir_6507 7644147 7645037 - succinyl-CoA synthetase%2C alpha subunit TIGRFAM: succinyl-CoA synthetase%2C alpha subunit~PFAM: CoA-binding domain protein%3B ATP-citrate lyase/succinyl-CoA ligase~KEGG: cps:CPS_2222 succinyl-CoA synthase%2C alpha subunit gene gene6576 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6507 Amir_6508 Amir_6508 Amir_6508 7645043 7646212 - succinyl-CoA synthetase%2C beta subunit KEGG: nis:NIS_0838 succinyl-CoA synthase%2C beta subunit~TIGRFAM: succinyl-CoA synthetase%2C beta subunit~PFAM: ATP-grasp domain protein%3B ATP-citrate lyase/succinyl-CoA ligase gene gene6577 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6508 Amir_6509 Amir_6509 Amir_6509 7646449 7648011 - hypothetical protein KEGG: mpo:Mpop_4712 hypothetical protein gene gene6578 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6509 Amir_6510 Amir_6510 Amir_6510 7648571 7649452 - hypothetical protein KEGG: bpm:BURPS1710b_2554 hypothetical protein gene gene6579 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6510 Amir_6511 Amir_6511 Amir_6511 7650110 7650784 + Peptidase M23 PFAM: Peptidase M23~KEGG: peptidase M23B gene gene6580 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6511 Amir_6512 Amir_6512 Amir_6512 7650759 7651124 - hypothetical protein gene gene6581 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6512 Amir_6513 Amir_6513 Amir_6513 7651764 7654109 - ATP-dependent DNA helicase PcrA TIGRFAM: ATP-dependent DNA helicase PcrA~PFAM: UvrD/REP helicase~KEGG: bsu:BSU06610 ATP-dependent DNA helicase gene gene6582 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6513 Amir_6514 Amir_6514 Amir_6514 7654346 7654636 + chorismate mutase TIGRFAM: chorismate mutase~KEGG: cha:CHAB381_1299 chorismate mutase/prephenate dehydratase gene gene6583 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6514 Amir_6515 Amir_6515 Amir_6515 7654778 7655842 - histone deacetylase superfamily PFAM: histone deacetylase superfamily~KEGG: HDA08%3B HDA08 (histone deacetylase 8)%3B histone deacetylase gene gene6584 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6515 Amir_6516 Amir_6516 Amir_6516 7655913 7656230 + hypothetical protein KEGG: gbm:Gbem_3934 protein of unknown function DUF6 transmembrane gene gene6585 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6516 Amir_6517 Amir_6517 Amir_6517 7656333 7657271 + hypothetical protein KEGG: Taf4a%3B TAF4A RNA polymerase II%2C TATA box binding protein (TBP)-associated factor%3B K03129 transcription initiation factor TFIID subunit D3 gene gene6586 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6517 Amir_6518 Amir_6518 Amir_6518 7657458 7658285 + hypothetical protein gene gene6587 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6518 Amir_6519 Amir_6519 Amir_6519 7658447 7659370 + hypothetical protein KEGG: GH10507 gene product from transcript GH10507- RA gene gene6588 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6519 Amir_6520 Amir_6520 Amir_6520 7659642 7661042 + serine/threonine protein kinase PFAM: Serine/threonine protein kinase-related%3B tyrosine protein kinase~SMART: serine/threonine protein kinase%3B tyrosine protein kinase~KEGG: mxa:MXAN_4017 serine/threonine protein kinase gene gene6589 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6520 Amir_6521 Amir_6521 Amir_6521 7661187 7662848 + serine/threonine protein kinase PFAM: Serine/threonine protein kinase-related%3B tyrosine protein kinase~SMART: serine/threonine protein kinase%3B tyrosine protein kinase~KEGG: mxa:MXAN_4017 serine/threonine protein kinase gene gene6590 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6521 Amir_6522 Amir_6522 Amir_6522 7662882 7663784 - transcriptional regulator%2C LysR family PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: aav:Aave_0303 transcriptional regulator%2C LysR family gene gene6591 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6522 Amir_6523 Amir_6523 Amir_6523 7663866 7664807 + protein of unknown function DUF6 transmembrane PFAM: protein of unknown function DUF6 transmembrane%3B Protein of unknown function DUF250~KEGG: hypothetical protein gene gene6592 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6523 Amir_6524 Amir_6524 Amir_6524 7664979 7665389 + sporulation and cell division protein SsgA PFAM: sporulation and cell division protein SsgA gene gene6593 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6524 Amir_6525 Amir_6525 Amir_6525 7665431 7666081 - two component transcriptional regulator%2C LuxR family PFAM: response regulator receiver%3B regulatory protein LuxR~SMART: regulatory protein LuxR%3B response regulator receiver~KEGG: eba:ebA6278 nitrate/nitrite response regulator gene gene6594 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6525 Amir_6526 Amir_6526 Amir_6526 7666078 7667412 - putative signal transduction histidine kinase PFAM: PspC domain protein%3B ATP-binding region ATPase domain protein~KEGG: sus:Acid_2189 histidine kinase gene gene6595 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6526 Amir_6527 Amir_6527 Amir_6527 7667432 7668685 + phage shock protein C%2C PspC PFAM: PspC domain protein~KEGG: aba:Acid345_1324 phage shock protein C%2C PspC gene gene6596 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6527 Amir_6528 Amir_6528 Amir_6528 7668678 7668881 + hypothetical protein gene gene6597 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6528 Amir_6529 Amir_6529 Amir_6529 7669002 7670561 - GMP synthase%2C large subunit TIGRFAM: GMP synthase%2C large subunit%3B GMP synthase%2C small subunit~PFAM: glutamine amidotransferase class-I%3B GMP synthase domain protein~KEGG: ank:AnaeK_1521 GMP synthase%2C large subunit gene gene6598 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6529 Amir_6530 Amir_6530 Amir_6530 7670661 7671377 + aminoglycoside phosphotransferase PFAM: aminoglycoside phosphotransferase~KEGG: scl:sce4958 hypothetical protein gene gene6599 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6530 Amir_6531 Amir_6531 Amir_6531 7671412 7672857 + aldehyde dehydrogenase PFAM: Aldehyde Dehydrogenase~KEGG: mxa:MXAN_2844 putative succinate-semialdehyde dehydrogenase gene gene6600 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6531 Amir_6532 Amir_6532 Amir_6532 7673298 7674986 - glucose-methanol-choline oxidoreductase PFAM: glucose-methanol-choline oxidoreductase%3B FAD dependent oxidoreductase%3B GMC oxidoreductase~KEGG: scl:sce0787 hypothetical protein gene gene6601 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6532 Amir_6533 Amir_6533 Amir_6533 7675150 7675356 - hypothetical protein gene gene6602 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6533 Amir_6534 Amir_6534 Amir_6534 7675514 7676647 - IMP dehydrogenase family protein TIGRFAM: IMP dehydrogenase family protein~KEGG: rru:Rru_A1958 GMP reductase gene gene6603 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6534 Amir_6535 Amir_6535 Amir_6535 7676679 7678190 - inosine-5'-monophosphate dehydrogenase KEGG: sfu:Sfum_2122 inosine-5'-monophosphate dehydrogenase~TIGRFAM: inosine-5'-monophosphate dehydrogenase~PFAM: IMP dehydrogenase/GMP reductase%3B CBS domain containing protein~SMART: CBS domain containing protein gene gene6604 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6535 Amir_6536 Amir_6536 Amir_6536 7678314 7678709 + hypothetical protein gene gene6605 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6536 Amir_6537 Amir_6537 Amir_6537 7678850 7679770 - hypothetical protein KEGG: similar to mucin 7%2C salivary gene gene6606 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6537 Amir_6538 Amir_6538 Amir_6538 7679771 7680343 - RNA polymerase%2C sigma-24 subunit%2C ECF subfamily TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family~PFAM: sigma-70 region 2 domain protein%3B Sigma-70 region 4 type 2%3B sigma-70 region 4 domain protein~KEGG: mno:Mnod_5360 RNA polymerase%2C sigma-24 subunit%2C ECF subfamily gene gene6607 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6538 Amir_6539 Amir_6539 Amir_6539 7681488 7682084 - two component transcriptional regulator%2C LuxR family PFAM: regulatory protein LuxR%3B response regulator receiver~SMART: regulatory protein LuxR%3B response regulator receiver~KEGG: smt:Smal_2340 two component transcriptional regulator%2C LuxR family gene gene6608 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6539 Amir_6540 Amir_6540 Amir_6540 7682165 7683715 - hypothetical protein KEGG: hypothetical protein gene gene6609 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6540 Amir_6541 Amir_6541 Amir_6541 7683992 7684921 - transcriptional regulator%2C MerR family PFAM: regulatory protein MerR~SMART: regulatory protein MerR~KEGG: mxa:MXAN_0904 B12 binding domain/transcriptional regulator%2C MerR family gene gene6610 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6541 Amir_6542 Amir_6542 Amir_6542 7685149 7685484 + transcription factor WhiB PFAM: transcription factor WhiB gene gene6611 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6542 Amir_6543 Amir_6543 Amir_6543 7685657 7687282 - chaperonin GroEL TIGRFAM: chaperonin GroEL~PFAM: chaperonin Cpn60/TCP-1~KEGG: sus:Acid_6747 chaperonin GroEL gene gene6612 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6543 Amir_6544 Amir_6544 Amir_6544 7687367 7687660 - chaperonin Cpn10 PFAM: chaperonin Cpn10~KEGG: bcu:BCAH820_0292 chaperonin%2C 10 kDa gene gene6613 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6544 Amir_6545 Amir_6545 Amir_6545 7688022 7688855 - hypothetical protein gene gene6614 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6545 Amir_6546 Amir_6546 Amir_6546 7689012 7690064 - metalloendopeptidase%2C glycoprotease family KEGG: afw:Anae109_3813 metalloendopeptidase glycoprotease family~TIGRFAM: metalloendopeptidase%2C glycoprotease family~PFAM: peptidase M22 glycoprotease gene gene6615 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6546 Amir_6547 Amir_6547 Amir_6547 7690057 7690515 - ribosomal-protein-alanine acetyltransferase TIGRFAM: ribosomal-protein-alanine acetyltransferase~PFAM: GCN5-related N-acetyltransferase~KEGG: smt:Smal_0531 ribosomal-protein-alanine acetyltransferase gene gene6616 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6547 Amir_6548 Amir_6548 Amir_6548 7690512 7691210 - peptidase M22 glycoprotease PFAM: peptidase M22 glycoprotease~KEGG: pzu:PHZ_c3457 metal-dependent protease (with possible chaperone activity) gene gene6617 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6548 Amir_6549 Amir_6549 Amir_6549 7691276 7691662 + transcriptional regulator%2C MerR family PFAM: regulatory protein MerR~SMART: regulatory protein MerR~KEGG: rpa:RPA4825 MerR family transcriptional regulator gene gene6618 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6549 Amir_6550 Amir_6550 Amir_6550 7691650 7691955 + thioredoxin domain protein PFAM: Thioredoxin domain~KEGG: bcy:Bcer98_3221 thioredoxin gene gene6619 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6550 Amir_6551 Amir_6551 Amir_6551 7691986 7693338 + AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: mxa:MXAN_7148 putative long-chain fatty acid-- CoA ligase gene gene6620 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6551 Amir_6552 Amir_6552 Amir_6552 7693357 7694042 + pseudogene gene6621 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6552 Amir_6553 Amir_6553 Amir_6553 7694043 7694567 - hypothetical protein gene gene6622 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6553 Amir_6554 Amir_6554 Amir_6554 7694629 7695108 - protein of unknown function UPF0079 PFAM: protein of unknown function UPF0079~KEGG: jan:Jann_4062 hypothetical protein gene gene6623 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6554 Amir_6555 Amir_6555 Amir_6555 7695108 7696208 - alpha/beta hydrolase fold protein PFAM: alpha/beta hydrolase fold~KEGG: scl:sce8687 hypothetical protein gene gene6624 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6555 Amir_6556 Amir_6556 Amir_6556 7696205 7697371 - alanine racemase KEGG: dol:Dole_0057 alanine racemase~TIGRFAM: alanine racemase~PFAM: alanine racemase domain protein gene gene6625 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6556 Amir_6557 Amir_6557 Amir_6557 7697368 7698765 - carbohydrate kinase%2C YjeF related protein TIGRFAM: carbohydrate kinase%2C YjeF related protein~PFAM: protein of unknown function UPF0031%3B YjeF- family domain protein~KEGG: swi:Swit_4659 carbohydrate kinase%2C YjeF related protein gene gene6626 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6557 Amir_6558 Amir_6558 Amir_6558 7698890 7700752 - glucosamine/fructose-6-phosphate aminotransferase%2C isomerizing TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase%2C isomerizing~PFAM: sugar isomerase (SIS)%3B glutamine amidotransferase class-II~KEGG: aba:Acid345_0997 glutamine--fructose-6- phosphate transaminase gene gene6627 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6558 Amir_6559 Amir_6559 Amir_6559 7700887 7701699 + dienelactone hydrolase-like protein KEGG: scl:sce1807 hypothetical protein gene gene6628 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6559 Amir_6560 Amir_6560 Amir_6560 7701823 7702305 - conserved hypothetical protein KEGG: hypothetical protein gene gene6629 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6560 Amir_6561 Amir_6561 Amir_6561 7702302 7705190 - hypothetical protein KEGG: hypothetical protein gene gene6630 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6561 Amir_6562 Amir_6562 Amir_6562 7705187 7705480 - hypothetical protein gene gene6631 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6562 Amir_6563 Amir_6563 Amir_6563 7705799 7707133 - phosphoglucosamine mutase TIGRFAM: phosphoglucosamine mutase~PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I%3B phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III%3B phosphoglucomutase/phosphomannomutase%3B phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II~KEGG: pca:Pcar_1001 phosphohexomutase gene gene6632 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6563 Amir_6564 Amir_6564 Amir_6564 7707252 7707902 - ribosomal protein S9 PFAM: ribosomal protein S9~KEGG: bha:BH0169 30S ribosomal protein S9 gene gene6633 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6564 Amir_6565 Amir_6565 Amir_6565 7707899 7708342 - ribosomal protein L13 TIGRFAM: ribosomal protein L13~PFAM: ribosomal protein L13~KEGG: abo:ABO_0576 50S ribosomal protein L13 gene gene6634 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6565 Amir_6566 Amir_6566 Amir_6566 7708647 7708937 - protein of unknown function DUF909 PFAM: protein of unknown function DUF909~KEGG: hypothetical protein gene gene6635 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6566 Amir_6567 Amir_6567 Amir_6567 7709021 7709338 - protein of unknown function DUF909 PFAM: protein of unknown function DUF909 gene gene6636 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6567 Amir_6568 Amir_6568 Amir_6568 7709487 7709903 - chemotaxis histidine kinase/response regulator KEGG: bpl:BURPS1106A_A2538 chemotaxis histidine kinase/response regulator gene gene6637 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6568 Amir_6569 Amir_6569 Amir_6569 7709920 7711851 - Heat shock protein 70 PFAM: Heat shock protein 70~KEGG: mag:amb3024 chaperone protein HscA gene gene6638 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6569 Amir_6570 Amir_6570 Amir_6570 7712435 7713076 + hypothetical protein gene gene6639 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6570 Amir_6571 Amir_6571 Amir_6571 7713178 7717179 - cell divisionFtsK/SpoIIIE PFAM: cell divisionFtsK/SpoIIIE~KEGG: bcz:BCZK1985 FtsK/SpoIIIE family protein gene gene6640 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6571 Amir_6572 Amir_6572 Amir_6572 7717462 7718856 + secretion protein snm4 TIGRFAM: secretion protein snm4~PFAM: protein of unknown function DUF571~KEGG: hypothetical protein gene gene6641 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6572 Amir_6573 Amir_6573 Amir_6573 7718868 7720346 + peptidase S8 and S53 subtilisin kexin sedolisin PFAM: peptidase S8 and S53 subtilisin kexin sedolisin~KEGG: bca:BCE_2410 alkaline serine protease gene gene6642 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6573 Amir_6574 Amir_6574 Amir_6574 7720549 7721688 - hypothetical protein KEGG: predicted gene%2C 100041170 gene gene6643 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6574 Amir_6575 Amir_6575 Amir_6575 7721703 7722047 - hypothetical protein gene gene6644 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6575 Amir_6576 Amir_6576 Amir_6576 7722436 7724058 - protein of unknown function DUF690 PFAM: protein of unknown function DUF690 gene gene6645 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6576 Amir_6577 Amir_6577 Amir_6577 7724292 7725620 + hypothetical protein KEGG: GK21128 gene product from transcript GK21128- RA gene gene6646 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6577 Amir_6578 Amir_6578 Amir_6578 7725617 7726342 + hypothetical protein gene gene6647 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6578 Amir_6579 Amir_6579 Amir_6579 7726404 7726604 + pseudogene gene6648 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6579 Amir_6580 Amir_6580 Amir_6580 7726642 7728201 + peptidase S8 and S53 subtilisin kexin sedolisin PFAM: peptidase S8 and S53 subtilisin kexin sedolisin%3B Proprotein convertase P%3B proteinase inhibitor I9 subtilisin propeptide~KEGG: mca:MCA0875 serine protease gene gene6649 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6580 Amir_6581 Amir_6581 Amir_6581 7728291 7729235 - tRNA-pseudouridine synthase I PFAM: tRNA pseudouridine synthase~KEGG: rpe:RPE_0654 tRNA pseudouridine synthase A gene gene6650 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6581 Amir_6582 Amir_6582 Amir_6582 7729232 7729822 - ribosomal protein L17 TIGRFAM: ribosomal protein L17~PFAM: ribosomal protein L17~KEGG: dol:Dole_0734 ribosomal protein L17 gene gene6651 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6582 Amir_6583 Amir_6583 Amir_6583 7729881 7730933 - DNA-directed RNA polymerase%2C alpha subunit KEGG: bha:BH0162 DNA-directed RNA polymerase subunit alpha~TIGRFAM: DNA-directed RNA polymerase%2C alpha subunit~PFAM: RNA polymerase insert%3B RNA polymerase alpha subunit domain protein%3B RNA polymerase dimerisation~SMART: RNA polymerase RpoA/D/Rpb3-type gene gene6652 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6583 Amir_6584 Amir_6584 Amir_6584 7731079 7731684 - ribosomal protein S4 KEGG: nis:NIS_0248 30S ribosomal protein S4~TIGRFAM: ribosomal protein S4~PFAM: ribosomal protein S4%3B RNA-binding S4 domain protein~SMART: RNA-binding S4 domain protein gene gene6653 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6584 Amir_6585 Amir_6585 Amir_6585 7731708 7732115 - ribosomal protein S11 PFAM: ribosomal protein S11~KEGG: sat:SYN_01599 30S ribosomal protein S11 gene gene6654 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6585 Amir_6586 Amir_6586 Amir_6586 7732148 7732528 - ribosomal protein S13 PFAM: ribosomal protein S13~KEGG: gsu:GSU2834 30S ribosomal protein S13 gene gene6655 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6586 Amir_6587 Amir_6587 Amir_6587 7732746 7732859 - ribosomal protein L36 TIGRFAM: ribosomal protein L36~PFAM: ribosomal protein L36~KEGG: aba:Acid345_1250 LSU ribosomal protein L36P gene gene6656 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6587 Amir_6588 Amir_6588 Amir_6588 7732910 7733131 - translation initiation factor IF-1 TIGRFAM: translation initiation factor IF-1~PFAM: S1 IF1 family protein~KEGG: bha:BH0158 translation initiation factor IF-1 gene gene6657 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6588 Amir_6589 Amir_6589 Amir_6589 7733284 7733841 - hypothetical protein KEGG: mpo:Mpop_2819 translation initiation factor IF-2 gene gene6658 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6589 Amir_6590 Amir_6590 Amir_6590 7733872 7734348 - protein of unknown function DUF1707 PFAM: protein of unknown function DUF1707 gene gene6659 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6590 Amir_6591 Amir_6591 Amir_6591 7734533 7734664 + hypothetical protein gene gene6660 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6591 Amir_6592 Amir_6592 Amir_6592 7734801 7735577 - methionine aminopeptidase%2C type I TIGRFAM: methionine aminopeptidase%2C type I~PFAM: peptidase M24~KEGG: bha:BH0156 methionine aminopeptidase gene gene6661 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6592 Amir_6593 Amir_6593 Amir_6593 7735631 7736182 - adenylate kinase TIGRFAM: adenylate kinase~PFAM: adenylate kinase~KEGG: sml:Smlt3886 putative adenylate kinase (fragment) gene gene6662 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6593 Amir_6594 Amir_6594 Amir_6594 7736183 7737493 - preprotein translocase%2C SecY subunit TIGRFAM: preprotein translocase%2C SecY subunit~PFAM: SecY protein~KEGG: acp:A2cp1_2038 preprotein translocase%2C SecY subunit gene gene6663 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6594 Amir_6595 Amir_6595 Amir_6595 7738012 7738455 - ribosomal protein L15 TIGRFAM: ribosomal protein L15~PFAM: ribosomal protein L15~KEGG: sfu:Sfum_1574 ribosomal protein L15 gene gene6664 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6595 Amir_6596 Amir_6596 Amir_6596 7738452 7738637 - ribosomal protein L30 TIGRFAM: ribosomal protein L30~PFAM: ribosomal protein L30~KEGG: bbr:BB0049 50S ribosomal protein L30 gene gene6665 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6596 Amir_6597 Amir_6597 Amir_6597 7738640 7739245 - ribosomal protein S5 TIGRFAM: ribosomal protein S5~PFAM: Ribosomal protein S5%3B ribosomal protein S5 domain protein~KEGG: scl:sce7946 30S ribosomal protein S5 gene gene6666 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6597 Amir_6598 Amir_6598 Amir_6598 7739280 7739678 - ribosomal protein L18 TIGRFAM: ribosomal protein L18~PFAM: ribosomal protein L18P/L5E~KEGG: bsu:BSU01320 50S ribosomal protein L18 gene gene6667 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6598 Amir_6599 Amir_6599 Amir_6599 7739680 7740219 - ribosomal protein L6 PFAM: ribosomal protein L6~KEGG: cak:Caul_1629 50S ribosomal protein L6 gene gene6668 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6599 Amir_6600 Amir_6600 Amir_6600 7740237 7740635 - ribosomal protein S8 PFAM: ribosomal protein S8~KEGG: bha:BH0148 30S ribosomal protein S8 gene gene6669 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6600 Amir_6601 Amir_6601 Amir_6601 7740776 7740961 - ribosomal protein S14 PFAM: ribosomal protein S14~KEGG: cju:C8J_1598 30S ribosomal protein S14 gene gene6670 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6601 Amir_6602 Amir_6602 Amir_6602 7740965 7741528 - ribosomal protein L5 PFAM: ribosomal protein L5~KEGG: csa:Csal_0433 50S ribosomal protein L5 gene gene6671 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6602 Amir_6603 Amir_6603 Amir_6603 7741528 7741842 - ribosomal protein L24 KEGG: rle:RL1785 50S ribosomal protein L24~TIGRFAM: ribosomal protein L24~PFAM: KOW domain protein~SMART: KOW domain protein gene gene6672 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6603 Amir_6604 Amir_6604 Amir_6604 7741845 7742213 - ribosomal protein L14 TIGRFAM: ribosomal protein L14~PFAM: ribosomal protein L14b/L23e~KEGG: bcy:Bcer98_0114 50S ribosomal protein L14 gene gene6673 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6604 Amir_6605 Amir_6605 Amir_6605 7742276 7742557 - ribosomal protein S17 PFAM: ribosomal protein S17~KEGG: bsu:BSU01250 30S ribosomal protein S17 gene gene6674 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6605 Amir_6606 Amir_6606 Amir_6606 7742554 7742802 - ribosomal protein L29 TIGRFAM: ribosomal protein L29~PFAM: ribosomal protein L29~KEGG: bha:BH0142 50S ribosomal protein L29 gene gene6675 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6606 Amir_6607 Amir_6607 Amir_6607 7742802 7743221 - ribosomal protein L16 TIGRFAM: ribosomal protein L16~PFAM: ribosomal protein L16~KEGG: bha:BH0141 50S ribosomal protein L16 gene gene6676 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6607 Amir_6608 Amir_6608 Amir_6608 7743225 7744052 - ribosomal protein S3 KEGG: atc:AGR_C_3546 30S ribosomal protein S3~TIGRFAM: ribosomal protein S3~PFAM: ribosomal protein S3- domain protein%3B KH type 2 domain protein%3B Ribosomal protein S3 domain~SMART: KH domain protein gene gene6677 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6608 Amir_6609 Amir_6609 Amir_6609 7744052 7744453 - ribosomal protein L22 TIGRFAM: ribosomal protein L22~PFAM: ribosomal protein L22/L17~KEGG: bcu:BCAH820_0127 ribosomal protein L22 gene gene6678 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6609 Amir_6610 Amir_6610 Amir_6610 7744489 7744770 - ribosomal protein S19 TIGRFAM: ribosomal protein S19~PFAM: ribosomal protein S19/S15~KEGG: bha:BH0138 30S ribosomal protein S19 gene gene6679 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6610 Amir_6611 Amir_6611 Amir_6611 7744789 7745622 - ribosomal protein L2 TIGRFAM: ribosomal protein L2~PFAM: ribosomal protein L2~KEGG: dvu:DVU1306 50S ribosomal protein L2 gene gene6680 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6611 Amir_6612 Amir_6612 Amir_6612 7745645 7745944 - Ribosomal protein L25/L23 PFAM: Ribosomal protein L25/L23~KEGG: mpo:Mpop_2125 ribosomal protein L25/L23 gene gene6681 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6612 Amir_6613 Amir_6613 Amir_6613 7745941 7746636 - ribosomal protein L4/L1e PFAM: ribosomal protein L4/L1e~KEGG: bha:BH0135 50S ribosomal protein L4 gene gene6682 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6613 Amir_6614 Amir_6614 Amir_6614 7746639 7747289 - ribosomal protein L3 PFAM: ribosomal protein L3~KEGG: sde:Sde_0960 50S ribosomal protein L3P gene gene6683 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6614 Amir_6615 Amir_6615 Amir_6615 7747341 7747646 - ribosomal protein S10 TIGRFAM: ribosomal protein S10~PFAM: ribosomal protein S10~KEGG: bha:BH0133 30S ribosomal protein S10 gene gene6684 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6615 Amir_6616 Amir_6616 Amir_6616 7747990 7749183 - translation elongation factor Tu KEGG: ppd:Ppro_0678 elongation factor Tu~TIGRFAM: translation elongation factor Tu%3B small GTP-binding protein~PFAM: protein synthesis factor GTP-binding%3B elongation factor Tu domain protein%3B elongation factor Tu domain 2 protein gene gene6685 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6616 Amir_6617 Amir_6617 Amir_6617 7749321 7751423 - translation elongation factor G TIGRFAM: translation elongation factor G%3B small GTP- binding protein~PFAM: protein synthesis factor GTP-binding%3B elongation factor G domain protein%3B elongation factor Tu domain 2 protein%3B elongation factor G domain IV~KEGG: hac:Hac_1575 elongation factor G gene gene6686 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6617 Amir_6618 Amir_6618 Amir_6618 7751511 7751981 - ribosomal protein S7 TIGRFAM: ribosomal protein S7~PFAM: ribosomal protein S7~KEGG: bha:BH0130 30S ribosomal protein S7 gene gene6687 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6618 Amir_6619 Amir_6619 Amir_6619 7751981 7752355 - ribosomal protein S12 TIGRFAM: ribosomal protein S12~PFAM: ribosomal protein S12/S23~KEGG: bur:Bcep18194_A3442 30S ribosomal protein S12 gene gene6688 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6619 Amir_6620 Amir_6620 Amir_6620 7752965 7753294 + hypothetical protein KEGG: similar to pinin gene gene6689 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6620 Amir_6621 Amir_6621 Amir_6621 7753306 7753608 + hypothetical protein gene gene6690 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6621 Amir_6622 Amir_6622 Amir_6622 7754414 7754569 - hypothetical protein gene gene6691 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6622 Amir_6623 Amir_6623 Amir_6623 7754700 7755331 + pseudogene gene6692 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6623 Amir_6624 Amir_6624 Amir_6624 7755319 7756191 + aminoglycoside phosphotransferase PFAM: aminoglycoside phosphotransferase~KEGG: mch:Mchl_5542 aminoglycoside phosphotransferase gene gene6693 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6624 Amir_6625 Amir_6625 Amir_6625 7756228 7756521 + conserved hypothetical protein KEGG: tbd:Tbd_1197 hypothetical protein gene gene6694 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6625 Amir_6626 Amir_6626 Amir_6626 7756765 7760661 - DNA-directed RNA polymerase%2C beta' subunit KEGG: bha:BH0127 DNA-directed RNA polymerase subunit beta'~TIGRFAM: DNA-directed RNA polymerase%2C beta' subunit~PFAM: RNA polymerase Rpb1 domain 1%3B RNA polymerase alpha subunit%3B RNA polymerase Rpb1 domain 5%3B RNA polymerase Rpb1 domain 3%3B RNA polymerase Rpb1 domain 4~SMART: RNA polymerase I subunit A domain protein gene gene6695 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6626 Amir_6627 Amir_6627 Amir_6627 7760779 7764261 - DNA-directed RNA polymerase%2C beta subunit TIGRFAM: DNA-directed RNA polymerase%2C beta subunit~PFAM: RNA polymerase Rpb2 domain 6%3B RNA polymerase Rpb2 domain 7%3B RNA polymerase Rpb2 domain 3%3B RNA polymerase Rpb2 domain 2%3B RNA polymerase beta subunit~KEGG: bat:BAS0102 DNA-directed RNA polymerase subunit beta gene gene6696 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6627 Amir_6628 Amir_6628 Amir_6628 7764674 7765789 - hypothetical protein KEGG: fibrocystin-L-like protein gene gene6697 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6628 Amir_6629 Amir_6629 Amir_6629 7765804 7766697 - hypothetical protein KEGG: PF9%3B flagellar inner arm dynein 1 heavy chain alpha gene gene6698 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6629 Amir_6630 Amir_6630 Amir_6630 7766708 7768123 - ABC-type transport system involved in resistance to organic solvents periplasmic component KEGG: rce:RC1_1665 HAMP domain protein gene gene6699 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6630 Amir_6631 Amir_6631 Amir_6631 7768123 7768476 - Mammalian cell entry related domain protein PFAM: Mammalian cell entry related domain protein~KEGG: rce:RC1_0924 ABC transporter substrate binding protein%2C putative gene gene6700 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6631 Amir_6632 Amir_6632 Amir_6632 7768478 7769464 - Mammalian cell entry related domain protein PFAM: Mammalian cell entry related domain protein~KEGG: gme:Gmet_1272 virulence factor MCE-like protein-related protein gene gene6701 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6632 Amir_6633 Amir_6633 Amir_6633 7769461 7770300 - protein of unknown function DUF140 PFAM: protein of unknown function DUF140~KEGG: ank:AnaeK_1997 protein of unknown function DUF140 gene gene6702 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6633 Amir_6634 Amir_6634 Amir_6634 7770302 7771084 - protein of unknown function DUF140 PFAM: protein of unknown function DUF140~KEGG: ade:Adeh_1863 ABC amino acid transporter%2C inner membrane subunit gene gene6703 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6634 Amir_6635 Amir_6635 Amir_6635 7771081 7772172 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: sat:SYN_00410 ABC-type transport system%2C ATP- binding component gene gene6704 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6635 Amir_6636 Amir_6636 Amir_6636 7772363 7772746 - ribosomal protein L7/L12 TIGRFAM: ribosomal protein L7/L12~PFAM: Ribosomal protein L7/L12~KEGG: bha:BH0122 50S ribosomal protein L7/L12 gene gene6705 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6636 Amir_6637 Amir_6637 Amir_6637 7772809 7773363 - ribosomal protein L10 PFAM: ribosomal protein L10~KEGG: gox:GOX0388 50S ribosomal protein L10P gene gene6706 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6637 Amir_6638 Amir_6638 Amir_6638 7773626 7774561 + hypothetical protein KEGG: rpa:RPA0213 OmpA family protein gene gene6707 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6638 Amir_6639 Amir_6639 Amir_6639 7774640 7775356 - ribosomal protein L1 TIGRFAM: ribosomal protein L1~PFAM: ribosomal protein L1~KEGG: bcy:Bcer98_0092 50S ribosomal protein L1 gene gene6708 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6639 Amir_6640 Amir_6640 Amir_6640 7775451 7775885 - ribosomal protein L11 KEGG: bsu:BSU01020 50S ribosomal protein L11~TIGRFAM: ribosomal protein L11~PFAM: ribosomal protein L11~SMART: ribosomal protein L11 gene gene6709 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6640 Amir_6641 Amir_6641 Amir_6641 7775994 7776794 - NusG antitermination factor KEGG: bha:BH0118 transcription antitermination protein NusG~TIGRFAM: transcription termination/antitermination factor NusG~PFAM: NGN domain protein%3B KOW domain protein~SMART: NGN domain protein gene gene6710 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6641 Amir_6642 Amir_6642 Amir_6642 7776880 7777290 - preprotein translocase%2C SecE subunit TIGRFAM: preprotein translocase%2C SecE subunit~PFAM: protein secE/sec61-gamma protein~KEGG: sfu:Sfum_1543 preprotein translocase%2C SecE subunit gene gene6711 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6642 Amir_6643 Amir_6643 Amir_6643 7777575 7778816 + aminotransferase class I and II PFAM: aminotransferase class I and II%3B aromatic amino acid beta-eliminating lyase/threonine aldolase~KEGG: gur:Gura_2501 aminotransferase%2C class I and II gene gene6713 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6643 Amir_6644 Amir_6644 Amir_6644 7779054 7779665 + hypothetical protein KEGG: xom:XOO_0364 hypothetical protein gene gene6714 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6644 Amir_6645 Amir_6645 Amir_6645 7779776 7780174 + hypothetical protein gene gene6715 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6645 Amir_6646 Amir_6646 Amir_6646 7780241 7780660 - MaoC domain protein dehydratase PFAM: MaoC domain protein dehydratase~KEGG: dal:Dalk_1161 MaoC domain protein dehydratase gene gene6716 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6646 Amir_6647 Amir_6647 Amir_6647 7780657 7781103 - conserved hypothetical protein KEGG: rpt:Rpal_3723 hypothetical protein gene gene6717 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6647 Amir_6648 Amir_6648 Amir_6648 7781176 7781340 - ribosomal protein L33 TIGRFAM: ribosomal protein L33~PFAM: ribosomal protein L33~KEGG: ribosomal protein L33%3B K02913 large subunit ribosomal protein L33 gene gene6718 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6648 Amir_6649 Amir_6649 Amir_6649 7781913 7784528 - diguanylate cyclase/phosphodiesterase with GAF sensor KEGG: xac:XAC2711 phosphodiesterase~TIGRFAM: diguanylate cyclase~PFAM: EAL domain protein%3B GGDEF domain containing protein%3B GAF domain protein~SMART: EAL domain protein%3B GGDEF domain containing protein%3B GAF domain protein gene gene6721 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6649 Amir_6650 Amir_6650 Amir_6650 7785339 7785860 - hypothetical protein KEGG: bpm:BURPS1710b_A0674 hypothetical protein gene gene6722 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6650 Amir_6651 Amir_6651 Amir_6651 7786131 7786376 + hypothetical protein gene gene6723 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6651 Amir_6652 Amir_6652 Amir_6652 7786481 7787404 - hypothetical protein KEGG: sml:Smlt3065 hypothetical protein gene gene6724 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6652 Amir_6653 Amir_6653 Amir_6653 7787680 7788171 + protein of unknown function DUF520 PFAM: protein of unknown function DUF520~KEGG: gur:Gura_0717 nucleotide-binding protein gene gene6726 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6653 Amir_6654 Amir_6654 Amir_6654 7788168 7789046 + glucose-1-phosphate thymidylyltransferase TIGRFAM: glucose-1-phosphate thymidylyltransferase~PFAM: Nucleotidyl transferase~KEGG: pcr:Pcryo_0625 glucose-1-phosphate thymidylyltransferase gene gene6727 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6654 Amir_6655 Amir_6655 Amir_6655 7789078 7789938 - peptidase M48 Ste24p PFAM: peptidase M48 Ste24p~KEGG: bxe:Bxe_A4413 heat shock protein HtpX gene gene6728 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6655 Amir_6656 Amir_6656 Amir_6656 7789973 7790494 - 4Fe-4S ferredoxin iron-sulfur binding domain protein PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein~KEGG: ank:AnaeK_1272 4Fe-4S ferredoxin iron-sulfur binding domain protein gene gene6729 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6656 Amir_6657 Amir_6657 Amir_6657 7790487 7791077 - NADH dehydrogenase (ubiquinone) 30 kDa subunit PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit~KEGG: mrd:Mrad2831_2058 NADH (or F420H2) dehydrogenase%2C subunit C gene gene6730 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6657 Amir_6658 Amir_6658 Amir_6658 7791077 7791490 - NADH-quinone oxidoreductase%2C B subunit TIGRFAM: NADH-quinone oxidoreductase%2C B subunit~PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit~KEGG: gbm:Gbem_3925 NADH-quinone oxidoreductase%2C B subunit gene gene6731 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6658 Amir_6659 Amir_6659 Amir_6659 7791736 7792779 + transcriptional regulator%2C LysR family PFAM: regulatory protein LysR~KEGG: rpb:RPB_4498 hypothetical protein gene gene6732 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6659 Amir_6660 Amir_6660 Amir_6660 7792776 7792925 - hypothetical protein gene gene6733 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6660 Amir_6661 Amir_6661 Amir_6661 7793666 7794544 - amidinotransferase PFAM: amidinotransferase~KEGG: aeh:Mlg_0130 amidinotransferase gene gene6734 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6661 Amir_6662 Amir_6662 Amir_6662 7794611 7795060 + transcriptional regulator%2C AsnC family PFAM: regulatory protein AsnC/Lrp family~SMART: regulatory protein AsnC/Lrp family~KEGG: bvi:Bcep1808_5003 AsnC family transcriptional regulator gene gene6735 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6662 Amir_6663 Amir_6663 Amir_6663 7795205 7795966 + Enoyl-CoA hydratase/isomerase PFAM: Enoyl-CoA hydratase/isomerase~KEGG: bch:Bcen2424_0176 enoyl-CoA hydratase gene gene6736 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6663 Amir_6664 Amir_6664 Amir_6664 7796218 7798101 + pyruvate flavodoxin/ferredoxin oxidoreductase domain protein PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein~KEGG: eba:ebA3149 2-oxoglutarate ferredoxin oxidoreductase alpha subunit gene gene6737 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6664 Amir_6665 Amir_6665 Amir_6665 7798098 7799141 + thiamine pyrophosphate protein domain protein TPP-binding PFAM: thiamine pyrophosphate protein domain protein TPP-binding~KEGG: eba:ebA3150 2-oxoglutarate ferredoxin oxidoreductase subunit beta gene gene6738 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6665 Amir_6666 Amir_6666 Amir_6666 7799222 7801828 - hypothetical protein KEGG: hypothetical protein gene gene6739 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6666 Amir_6667 Amir_6667 Amir_6667 7802025 7802966 + RarD protein%2C DMT superfamily transporter TIGRFAM: RarD protein%2C DMT superfamily transporter~PFAM: protein of unknown function DUF6 transmembrane~KEGG: cvi:CV_0304 RarD protein%2C chloamphenicol sensitive gene gene6740 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6667 Amir_6668 Amir_6668 Amir_6668 7803110 7804111 - Polyprenyl synthetase PFAM: Polyprenyl synthetase~KEGG: sit:TM1040_3742 farnesyltranstransferase gene gene6741 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6668 Amir_6669 Amir_6669 Amir_6669 7804133 7805716 - proton-translocating NADH-quinone oxidoreductase%2C chain N KEGG: gsu:GSU0351 NADH dehydrogenase I%2C N subunit~TIGRFAM: proton-translocating NADH-quinone oxidoreductase%2C chain N~PFAM: NADH/Ubiquinone/plastoquinone (complex I) gene gene6742 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6669 Amir_6670 Amir_6670 Amir_6670 7805718 7807280 - proton-translocating NADH-quinone oxidoreductase%2C chain M KEGG: mgm:Mmc1_3623 proton-translocating NADH- quinone oxidoreductase%2C chain M~TIGRFAM: proton-translocating NADH-quinone oxidoreductase%2C chain M~PFAM: NADH/Ubiquinone/plastoquinone (complex I) gene gene6743 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6670 Amir_6671 Amir_6671 Amir_6671 7807277 7809211 - proton-translocating NADH-quinone oxidoreductase%2C chain L KEGG: glo:Glov_3127 proton-translocating NADH- quinone oxidoreductase%2C chain L~TIGRFAM: proton-translocating NADH-quinone oxidoreductase%2C chain L~PFAM: NADH/Ubiquinone/plastoquinone (complex I)%3B NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein gene gene6744 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6671 Amir_6672 Amir_6672 Amir_6672 7809222 7809521 - NADH-ubiquinone oxidoreductase chain 4L PFAM: NADH-ubiquinone oxidoreductase chain 4L~KEGG: gur:Gura_4234 NADH-ubiquinone oxidoreductase%2C chain 4L gene gene6745 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6672 Amir_6673 Amir_6673 Amir_6673 7809518 7810351 - NADH-ubiquinone/plastoquinone oxidoreductase chain 6 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6~KEGG: nmc:NMC0247 NADH dehydrogenase I chain J gene gene6746 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6673 Amir_6674 Amir_6674 Amir_6674 7810348 7810914 - NADH-quinone oxidoreductase%2C chain I TIGRFAM: NADH-quinone oxidoreductase%2C chain I~PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein~KEGG: sus:Acid_3879 NADH-quinone oxidoreductase%2C chain I gene gene6747 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6674 Amir_6675 Amir_6675 Amir_6675 7810901 7812244 - NADH dehydrogenase (quinone) PFAM: respiratory-chain NADH dehydrogenase subunit 1~KEGG: NADH dehydrogenase (quinone)%3B K00337 NADH dehydrogenase I subunit H gene gene6748 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6675 Amir_6676 Amir_6676 Amir_6676 7812241 7814688 - NADH-quinone oxidoreductase%2C chain G TIGRFAM: NADH-quinone oxidoreductase%2C chain G~PFAM: molybdopterin oxidoreductase%3B ferredoxin%3B molybdopterin oxidoreductase Fe4S4 region%3B molydopterin dinucleotide-binding region~KEGG: smd:Smed_3617 molybdopterin oxidoreductase gene gene6749 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6676 Amir_6677 Amir_6677 Amir_6677 7814685 7815980 - NADH-quinone oxidoreductase%2C F subunit KEGG: sme:SMa1525 NuoF2 NADH I chain F~TIGRFAM: NADH-quinone oxidoreductase%2C F subunit~PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit gene gene6750 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6677 Amir_6678 Amir_6678 Amir_6678 7815990 7816754 - NADH dehydrogenase (ubiquinone) 24 kDa subunit PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit~KEGG: mag:amb2783 NADH:ubiquinone oxidoreductase 24 kD subunit gene gene6751 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6678 Amir_6679 Amir_6679 Amir_6679 7816751 7818202 - NADH dehydrogenase I%2C D subunit KEGG: sus:Acid_0111 NADH dehydrogenase I%2C D subunit~TIGRFAM: NADH dehydrogenase I%2C D subunit~PFAM: NADH-ubiquinone oxidoreductase chain 49kDa gene gene6752 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6679 Amir_6680 Amir_6680 Amir_6680 7818199 7818957 - NADH (or F420H2) dehydrogenase%2C subunit C TIGRFAM: NADH (or F420H2) dehydrogenase%2C subunit C~PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit~KEGG: sme:SMa1531 NuoC2 NADH I chain C gene gene6753 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6680 Amir_6681 Amir_6681 Amir_6681 7818963 7819511 - NADH-quinone oxidoreductase%2C B subunit KEGG: aba:Acid345_2252 NADH-quinone oxidoreductase%2C B subunit~TIGRFAM: NADH-quinone oxidoreductase%2C B subunit~PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit gene gene6754 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6681 Amir_6682 Amir_6682 Amir_6682 7819523 7819888 - NADH-ubiquinone/plastoquinone oxidoreductase chain 3 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3~KEGG: glo:Glov_3138 NADH-ubiquinone/plastoquinone oxidoreductase chain 3 gene gene6755 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6682 Amir_6683 Amir_6683 Amir_6683 7820237 7821517 - geranylgeranyl reductase TIGRFAM: geranylgeranyl reductase~PFAM: monooxygenase FAD-binding%3B FAD dependent oxidoreductase%3B Lycopene beta and epsilon cyclase~KEGG: pna:Pnap_1343 geranylgeranyl reductase gene gene6756 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6683 Amir_6684 Amir_6684 Amir_6684 7822409 7823101 - ubiquinone/menaquinone biosynthesis methyltransferase TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase~PFAM: UbiE/COQ5 methyltransferase%3B Methyltransferase type 11%3B Methyltransferase type 12~KEGG: sgl:SG0109 ubiquinone/menaquinone biosynthesis methyltransferase gene gene6757 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6684 Amir_6685 Amir_6685 Amir_6685 7823259 7824083 + inositol monophosphatase PFAM: inositol monophosphatase~KEGG: ade:Adeh_3387 inositol-1(or 4)- monophosphatase gene gene6758 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6685 Amir_6686 Amir_6686 Amir_6686 7824056 7824169 + hypothetical protein gene gene6759 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6686 Amir_6687 Amir_6687 Amir_6687 7824156 7824836 - hypothetical protein KEGG: predicted protein gene gene6760 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6687 Amir_6688 Amir_6688 Amir_6688 7824854 7825879 - phenylacetate-CoA oxygenase/reductase%2C PaaK subunit TIGRFAM: phenylacetate-CoA oxygenase/reductase%2C PaaK subunit~PFAM: ferredoxin%3B Oxidoreductase FAD-binding domain protein%3B oxidoreductase FAD/NAD(P)-binding domain protein~KEGG: azo:azo0308 phenylacetic acid degradation NADH oxidoreductase PaaE gene gene6761 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6688 Amir_6689 Amir_6689 Amir_6689 7825880 7826392 - phenylacetate-CoA oxygenase%2C PaaJ subunit TIGRFAM: phenylacetate-CoA oxygenase%2C PaaJ subunit~PFAM: protein of unknown function DUF59~KEGG: mno:Mnod_7196 phenylacetate-CoA oxygenase%2C PaaJ subunit gene gene6762 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6689 Amir_6690 Amir_6690 Amir_6690 7826389 7827342 - phenylacetate-CoA oxygenase%2C PaaI subunit TIGRFAM: phenylacetate-CoA oxygenase%2C PaaI subunit~PFAM: phenylacetic acid catabolic family protein~KEGG: rpd:RPD_1826 phenylacetate-CoA oxygenase%2C PaaI subunit gene gene6763 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6690 Amir_6691 Amir_6691 Amir_6691 7827351 7827641 - phenylacetate-CoA oxygenase%2C PaaH subunit TIGRFAM: phenylacetate-CoA oxygenase%2C PaaH subunit~PFAM: phenylacetic acid degradation B~KEGG: pde:Pden_4809 phenylacetate-CoA oxygenase%2C PaaH subunit gene gene6764 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6691 Amir_6692 Amir_6692 Amir_6692 7827638 7828573 - phenylacetate-CoA oxygenase%2C PaaG subunit TIGRFAM: phenylacetate-CoA oxygenase%2C PaaG subunit~PFAM: phenylacetic acid catabolic family protein~KEGG: cti:RALTA_A2973 subunit of multicomponent oxygenase%2C phenylacetic acid degradation with ferritin- like domain gene gene6765 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6692 Amir_6693 Amir_6693 Amir_6693 7828617 7829168 - hypothetical protein gene gene6766 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6693 Amir_6694 Amir_6694 Amir_6694 7829180 7830421 + isochorismate synthase TIGRFAM: isochorismate synthase~PFAM: Chorismate binding-like~KEGG: scl:sce5042 hypothetical protein gene gene6767 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6694 Amir_6695 Amir_6695 Amir_6695 7830470 7831516 - ADP-ribosylation/Crystallin J1 PFAM: ADP-ribosylation/Crystallin J1~KEGG: dol:Dole_0265 ADP-ribosylation/crystallin J1 gene gene6768 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6695 Amir_6696 Amir_6696 Amir_6696 7831575 7832654 + Pyridoxal-5'-phosphate-dependent protein beta subunit PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit~KEGG: sbp:Sbal223_2267 pyridoxal-5'-phosphate- dependent protein beta subunit gene gene6769 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6696 Amir_6697 Amir_6697 Amir_6697 7832802 7833200 + hypothetical protein gene gene6770 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6697 Amir_6698 Amir_6698 Amir_6698 7833247 7834119 - 1%2C4-dihydroxy-2-naphthoateoctaprenyltransferase TIGRFAM: 1%2C4-dihydroxy-2-naphthoate octaprenyltransferase~PFAM: UbiA prenyltransferase~KEGG: mxa:MXAN_3530 1%2C4-dihydroxy-2-naphthoate octaprenyltransferase gene gene6771 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6698 Amir_6699 Amir_6699 Amir_6699 7834169 7835416 - hypothetical protein KEGG: GD17417 gene product from transcript GD17417- RA gene gene6772 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6699 Amir_6700 Amir_6700 Amir_6700 7835532 7836593 - AMP-dependent synthetase and ligase KEGG: dar:Daro_2822 AMP-dependent synthetase and ligase gene gene6773 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6700 Amir_6701 Amir_6701 Amir_6701 7836620 7837531 - naphthoate synthase TIGRFAM: naphthoate synthase~PFAM: Enoyl-CoA hydratase/isomerase~KEGG: scl:sce5310 naphthoate synthase gene gene6774 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6701 Amir_6702 Amir_6702 Amir_6702 7837843 7839477 + 2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1- carboxylic acid synthase/2-oxoglutarate decarboxylase TIGRFAM: 2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1- carboxylic acid synthase/2-oxoglutarate decarboxylase~KEGG: bcy:Bcer98_3493 2-succinyl-6-hydroxy-2%2C4- cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase gene gene6775 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6702 Amir_6703 Amir_6703 Amir_6703 7839546 7841162 + Peptidase M1 membrane alanine aminopeptidase PFAM: Peptidase M1 membrane alanine aminopeptidase~KEGG: sus:Acid_2560 peptidase M1%2C membrane alanine aminopeptidase gene gene6776 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6703 Amir_6704 Amir_6704 Amir_6704 7841222 7841431 - hypothetical protein gene gene6777 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6704 Amir_6705 Amir_6705 Amir_6705 7841578 7842456 + helix-turn-helix domain protein PFAM: helix-turn-helix domain protein~SMART: helix-turn-helix domain protein~KEGG: xca:xccb100_3044 transcriptional regulator gene gene6778 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6705 Amir_6706 Amir_6706 Amir_6706 7842459 7842638 + protein of unknown function DUF397 PFAM: protein of unknown function DUF397 gene gene6779 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6706 Amir_6707 Amir_6707 Amir_6707 7842819 7843118 - hypothetical protein gene gene6780 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6707 Amir_6708 Amir_6708 Amir_6708 7843123 7843584 - transcriptional regulator%2C AsnC family PFAM: regulatory protein AsnC/Lrp family~SMART: regulatory protein AsnC/Lrp family~KEGG: scl:sce5626 leucine responsive regulatory protein gene gene6781 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6708 Amir_6709 Amir_6709 Amir_6709 7843734 7843952 + DNA binding domain protein%2C excisionase family TIGRFAM: DNA binding domain protein%2C excisionase family~PFAM: regulatory protein MerR~KEGG: cps:CPS_1619 DNA-binding response regulator gene gene6782 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6709 Amir_6710 Amir_6710 Amir_6710 7844081 7844263 + hypothetical protein gene gene6783 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6710 Amir_6711 Amir_6711 Amir_6711 7844485 7845972 - ATPase involved in chromosome partitioning KEGG: GG20667 gene product from transcript GG20667- RA gene gene6784 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6711 Amir_6712 Amir_6712 Amir_6712 7846106 7847071 - cytochrome c-type biogenesis protein CcsB TIGRFAM: cytochrome c-type biogenesis protein CcsB~PFAM: cytochrome c assembly protein~KEGG: pca:Pcar_3065 cytochrome c biogenesis protein gene gene6785 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6712 Amir_6713 Amir_6713 Amir_6713 7847071 7848627 - ResB family protein PFAM: ResB family protein~KEGG: cvi:CV_4387 cytochrome c-type biogenesis protein gene gene6786 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6713 Amir_6714 Amir_6714 Amir_6714 7848627 7849427 - cytochrome c biogenesis protein transmembrane region PFAM: cytochrome c biogenesis protein transmembrane region~KEGG: rpd:RPD_4260 cytochrome c biogenesis protein%2C transmembrane region gene gene6787 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6714 Amir_6715 Amir_6715 Amir_6715 7849526 7850587 + hypothetical protein KEGG: hch:HCH_01837 fibronectin type III domain- containing protein gene gene6788 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6715 Amir_6716 Amir_6716 Amir_6716 7850973 7851947 - Alcohol dehydrogenase GroES domain protein PFAM: Alcohol dehydrogenase GroES domain protein%3B Alcohol dehydrogenase zinc-binding domain protein~KEGG: mlo:mll2594 quinone oxidoreductase gene gene6789 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6716 Amir_6717 Amir_6717 Amir_6717 7851985 7852572 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen%3B Redoxin domain protein~KEGG: sfr:Sfri_1234 redoxin domain protein gene gene6790 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6717 Amir_6718 Amir_6718 Amir_6718 7852569 7853198 - Phosphoglycerate mutase PFAM: Phosphoglycerate mutase~KEGG: afr:AFE_0621 phosphoglycerate mutase family protein gene gene6791 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6718 Amir_6719 Amir_6719 Amir_6719 7853195 7854490 - glutamate-1-semialdehyde-2%2C1-aminomutase TIGRFAM: glutamate-1-semialdehyde-2%2C1-aminomutase~PFAM: aminotransferase class-III%3B aminotransferase class I and II~KEGG: bbr:BB4409 glutamate-1-semialdehyde 2%2C1- aminomutase gene gene6792 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6719 Amir_6720 Amir_6720 Amir_6720 7854596 7855090 - hypothetical protein KEGG: Hypothetical protein CBG04716 gene gene6793 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6720 Amir_6721 Amir_6721 Amir_6721 7855104 7855547 - hypothetical protein gene gene6794 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6721 Amir_6722 Amir_6722 Amir_6722 7855550 7856329 - hypothetical protein KEGG: hypothetical protein gene gene6795 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6722 Amir_6723 Amir_6723 Amir_6723 7856479 7856997 - hypothetical protein gene gene6796 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6723 Amir_6724 Amir_6724 Amir_6724 7857069 7857671 - hypothetical protein KEGG: hypothetical protein gene gene6797 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6724 Amir_6725 Amir_6725 Amir_6725 7857770 7858387 - hypothetical protein KEGG: scl:sce6476 hypothetical protein gene gene6798 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6725 Amir_6726 Amir_6726 Amir_6726 7858442 7859068 - hypothetical protein gene gene6799 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6726 Amir_6727 Amir_6727 Amir_6727 7859068 7860042 - Porphobilinogen synthase PFAM: delta-aminolevulinic acid dehydratase~KEGG: afw:Anae109_1415 delta-aminolevulinic acid dehydratase gene gene6800 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6727 Amir_6728 Amir_6728 Amir_6728 7860477 7862009 - Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase%3B Uroporphyrinogen III synthase HEM4~KEGG: sfu:Sfum_3201 uroporphyrin-III C- methyltransferase gene gene6801 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6728 Amir_6729 Amir_6729 Amir_6729 7862024 7862965 - porphobilinogen deaminase KEGG: sfu:Sfum_3202 porphobilinogen deaminase~TIGRFAM: porphobilinogen deaminase~PFAM: Porphobilinogen deaminase gene gene6802 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6729 Amir_6730 Amir_6730 Amir_6730 7862962 7864278 - glutamyl-tRNA reductase KEGG: ppd:Ppro_3377 glutamyl-tRNA reductase~TIGRFAM: glutamyl-tRNA reductase~PFAM: Tetrapyrrole biosynthesis%2C glutamyl-tRNA reductase-like%3B Shikimate/quinate 5-dehydrogenase gene gene6803 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6730 Amir_6731 Amir_6731 Amir_6731 7864325 7865095 - CoA-binding domain protein PFAM: CoA-binding domain protein%3B Rex DNA-binding domain protein~KEGG: sfu:Sfum_1603 redox-sensing transcriptional repressor REX gene gene6804 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6731 Amir_6732 Amir_6732 Amir_6732 7865360 7866010 - beta-Ig-H3/fasciclin PFAM: beta-Ig-H3/fasciclin~SMART: beta-Ig-H3/fasciclin~KEGG: rpe:RPE_0476 beta-Ig-H3/fasciclin gene gene6805 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6732 Amir_6733 Amir_6733 Amir_6733 7866093 7867919 - oxidoreductase molybdopterin binding PFAM: oxidoreductase molybdopterin binding~KEGG: sme:SMa2103 oxidoreductase gene gene6806 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6733 Amir_6734 Amir_6734 Amir_6734 7867972 7868208 - glutaredoxin 2 PFAM: glutaredoxin 2~KEGG: bpy:Bphyt_2902 glutaredoxin 2 gene gene6807 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6734 Amir_6735 Amir_6735 Amir_6735 7868225 7869736 - AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: mno:Mnod_7251 AMP-dependent synthetase and ligase gene gene6808 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6735 Amir_6736 Amir_6736 Amir_6736 7869928 7870581 + RNA polymerase%2C sigma-24 subunit%2C ECF subfamily TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family~PFAM: Sigma-70 region 4 type 2%3B sigma-70 region 2 domain protein%3B sigma-70 region 4 domain protein~KEGG: aba:Acid345_3132 sigma-24%2C ECF subfamily gene gene6809 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6736 Amir_6737 Amir_6737 Amir_6737 7870668 7871897 + hypothetical protein KEGG: ank:AnaeK_2468 hypothetical protein gene gene6810 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6737 Amir_6738 Amir_6738 Amir_6738 7871938 7872822 + HAD-superfamily subfamily IB hydrolase%2C TIGR01490 TIGRFAM: HAD-superfamily subfamily IB hydrolase%2C TIGR01490%3B HAD-superfamily hydrolase%2C subfamily IB (PSPase- like)~PFAM: Haloacid dehalogenase domain protein hydrolase~KEGG: pag:PLES_41761 putative phosphoserine phosphatase gene gene6811 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6738 Amir_6739 Amir_6739 Amir_6739 7872970 7873968 - phospholipid/glycerol acyltransferase PFAM: phospholipid/glycerol acyltransferase~SMART: phospholipid/glycerol acyltransferase~KEGG: dal:Dalk_1813 phospholipid/glycerol acyltransferase gene gene6812 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6739 Amir_6740 Amir_6740 Amir_6740 7874159 7875196 - NAD-dependent epimerase/dehydratase PFAM: NAD-dependent epimerase/dehydratase%3B Male sterility domain%3B short-chain dehydrogenase/reductase SDR~KEGG: dal:Dalk_1814 NAD-dependent epimerase/dehydratase gene gene6813 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6740 Amir_6741 Amir_6741 Amir_6741 7875526 7875627 - Protein of unknown function DUF1713 PFAM: Protein of unknown function DUF1713 gene gene6814 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6741 Amir_6742 Amir_6742 Amir_6742 7875795 7876007 - DNA binding domain protein%2C excisionase family TIGRFAM: DNA binding domain protein%2C excisionase family~KEGG: afw:Anae109_1068 DNA binding domain- containing protein gene gene6815 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6742 Amir_6743 Amir_6743 Amir_6743 7876189 7877001 - pyrroline-5-carboxylate reductase KEGG: mgm:Mmc1_3656 pyrroline-5-carboxylate reductase~TIGRFAM: pyrroline-5-carboxylate reductase~PFAM: NADP oxidoreductase coenzyme F420-dependent%3B NAD-dependent glycerol-3-phosphate dehydrogenase domain protein%3B Ketopantoate reductase ApbA/PanE domain protein gene gene6816 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6743 Amir_6744 Amir_6744 Amir_6744 7877468 7878274 - thioesterase superfamily protein PFAM: thioesterase superfamily protein~KEGG: dal:Dalk_1857 hypothetical protein gene gene6817 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6744 Amir_6745 Amir_6745 Amir_6745 7878310 7879170 - Proline dehydrogenase PFAM: Proline dehydrogenase~KEGG: mxa:MXAN_7405 proline dehydrogenase gene gene6818 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6745 Amir_6746 Amir_6746 Amir_6746 7879181 7879999 - Xylose isomerase domain protein TIM barrel PFAM: Xylose isomerase domain protein TIM barrel~KEGG: gbm:Gbem_1512 xylose isomerase domain protein TIM barrel gene gene6819 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6746 Amir_6747 Amir_6747 Amir_6747 7879996 7881438 - hypothetical protein KEGG: hypothetical protein gene gene6820 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6747 Amir_6748 Amir_6748 Amir_6748 7881438 7882457 - Ppx/GppA phosphatase PFAM: Ppx/GppA phosphatase~KEGG: afw:Anae109_0702 Ppx/GppA phosphatase gene gene6821 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6748 Amir_6749 Amir_6749 Amir_6749 7882476 7883156 - two component transcriptional regulator%2C winged helix family PFAM: response regulator receiver%3B transcriptional regulator domain protein~SMART: response regulator receiver~KEGG: bcb:BCB4264_A5589 DNA-binding response regulator YycF gene gene6822 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6749 Amir_6750 Amir_6750 Amir_6750 7883153 7884337 - histidine kinase KEGG: glo:Glov_0589 multi-sensor signal transduction histidine kinase~PFAM: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein gene gene6823 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6750 Amir_6751 Amir_6751 Amir_6751 7884446 7885273 - aldo/keto reductase PFAM: aldo/keto reductase~KEGG: reu:Reut_A0010 putative oxidoreductase gene gene6824 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6751 Amir_6752 Amir_6752 Amir_6752 7885352 7885987 + response regulator receiver protein KEGG: maq:Maqu_0164 response regulator receiver protein gene gene6825 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6752 Amir_6753 Amir_6753 Amir_6753 7886139 7886885 - phosphoglycerate mutase 1 family KEGG: YALI0B02728p%3B K01834 phosphoglycerate mutase~TIGRFAM: phosphoglycerate mutase 1 family~PFAM: Phosphoglycerate mutase gene gene6826 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6753 Amir_6754 Amir_6754 Amir_6754 7887173 7888726 - AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: dsh:Dshi_0253 AMP-dependent synthetase and ligase gene gene6827 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6754 Amir_6755 Amir_6755 Amir_6755 7889132 7890139 - hypothetical protein KEGG: scl:sce1077 hypothetical protein gene gene6828 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6755 Amir_6756 Amir_6756 Amir_6756 7890207 7890704 - hypothetical protein gene gene6829 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6756 Amir_6757 Amir_6757 Amir_6757 7890701 7891954 - UDP-N-acetylglucosamine TIGRFAM: UDP-N-acetylglucosamine~PFAM: glycosyl transferase group 1~KEGG: azo:azo1809 glycosyltransferase gene gene6830 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6757 Amir_6758 Amir_6758 Amir_6758 7892285 7893430 - ErfK/YbiS/YcfS/YnhG family protein PFAM: ErfK/YbiS/YcfS/YnhG family protein~KEGG: mca:MCA1018 ErfK/YbiS/YcfS/YnhG family protein gene gene6831 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6758 Amir_6759 Amir_6759 Amir_6759 7893534 7894265 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B KR domain protein%3B NAD-dependent epimerase/dehydratase~KEGG: scl:sce8093 putative oxidoreductase gene gene6832 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6759 Amir_6760 Amir_6760 Amir_6760 7894219 7895214 - hypothetical protein KEGG: noc:Noc_1844 hypothetical protein gene gene6833 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6760 Amir_6761 Amir_6761 Amir_6761 7895399 7896451 - UDP-N-acetylmuramate dehydrogenase PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase domain protein%3B FAD linked oxidase domain protein~KEGG: scl:sce7823 UDP-N-acetylmuramate dehydrogenase gene gene6834 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6761 Amir_6762 Amir_6762 Amir_6762 7896519 7897016 + hypothetical protein KEGG: hch:HCH_06841 hypothetical protein gene gene6835 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6762 Amir_6763 Amir_6763 Amir_6763 7897037 7897792 + conserved hypothetical protein KEGG: mxa:MXAN_2356 hypothetical protein gene gene6836 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6763 Amir_6764 Amir_6764 Amir_6764 7898674 7899411 + protein of unknown function DUF1503 PFAM: protein of unknown function DUF1503 gene gene6837 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6764 Amir_6765 Amir_6765 Amir_6765 7899435 7900310 + formyltetrahydrofolate deformylase TIGRFAM: formyltetrahydrofolate deformylase~PFAM: formyl transferase domain protein%3B amino acid- binding ACT domain protein~KEGG: pfl:PFL_4786 formyltetrahydrofolate deformylase gene gene6838 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6765 Amir_6766 Amir_6766 Amir_6766 7900352 7901434 + conserved hypothetical protein KEGG: mxa:MXAN_2885 hypothetical protein gene gene6839 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6766 Amir_6767 Amir_6767 Amir_6767 7901525 7902058 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: bsu:BSU17080 transcriptional regulator gene gene6840 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6767 Amir_6768 Amir_6768 Amir_6768 7902126 7902680 - YbaK/prolyl-tRNA synthetase associated region PFAM: YbaK/prolyl-tRNA synthetase associated region~KEGG: bbr:BB1555 hypothetical protein gene gene6841 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6768 Amir_6769 Amir_6769 Amir_6769 7902855 7903619 + transcriptional regulator%2C MerR family PFAM: TipAS antibiotic-recognition domain protein%3B regulatory protein MerR~SMART: regulatory protein MerR~KEGG: ccs:CCNA_00730 transcriptional regulator SkgA gene gene6842 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6769 Amir_6770 Amir_6770 Amir_6770 7903733 7904281 - intracellular protease%2C PfpI family TIGRFAM: intracellular protease%2C PfpI family~PFAM: ThiJ/PfpI domain protein~KEGG: psa:PST_4009 protease PfpI gene gene6843 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6770 Amir_6771 Amir_6771 Amir_6771 7904291 7904956 - flavin reductase-like%2C FMN-binding KEGG: sal:Sala_0890 flavin reductase-like%2C FMN- binding gene gene6844 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6771 Amir_6772 Amir_6772 Amir_6772 7904953 7905276 - hypothetical protein gene gene6845 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6772 Amir_6773 Amir_6773 Amir_6773 7905496 7906080 - hypothetical protein KEGG: hypothetical protein%3B K03497 chromosome partitioning protein%2C ParB family gene gene6846 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6773 Amir_6774 Amir_6774 Amir_6774 7906086 7906472 - transcriptional regulator%2C XRE family PFAM: helix-turn-helix domain protein~SMART: helix-turn-helix domain protein~KEGG: azc:AZC_2073 XRE family-like protein gene gene6847 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6774 Amir_6775 Amir_6775 Amir_6775 7906577 7907704 + protein-L-isoaspartate(D-aspartate)O-methyltrans ferase PFAM: protein-L-isoaspartate(D-aspartate) O- methyltransferase~KEGG: mex:Mext_4262 protein-L-isoaspartate O- methyltransferase gene gene6848 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6775 Amir_6776 Amir_6776 Amir_6776 7908001 7909257 - protein of unknown function DUF445 PFAM: protein of unknown function DUF445~KEGG: swi:Swit_4743 hypothetical protein gene gene6849 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6776 Amir_6777 Amir_6777 Amir_6777 7909314 7910459 + aminotransferase class I and II PFAM: aminotransferase class I and II%3B aromatic amino acid beta-eliminating lyase/threonine aldolase~KEGG: mxa:MXAN_3751 aminotransferase%2C classes I and II gene gene6850 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6777 Amir_6778 Amir_6778 Amir_6778 7910463 7912475 - hypothetical protein KEGG: pag:PLES_38291 hypothetical protein gene gene6851 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6778 Amir_6779 Amir_6779 Amir_6779 7912615 7913043 + hypothetical protein KEGG: scl:sce4225 hypothetical protein gene gene6852 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6779 Amir_6780 Amir_6780 Amir_6780 7913148 7913615 - protein of unknown function DUF1470 PFAM: protein of unknown function DUF1470~KEGG: sme:SMc00597 hypothetical protein gene gene6853 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6780 Amir_6781 Amir_6781 Amir_6781 7913794 7914318 + transcriptional regulator%2C PadR-like family PFAM: transcriptional regulator PadR family protein~KEGG: nar:Saro_2546 PadR family transcriptional regulator gene gene6854 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6781 Amir_6782 Amir_6782 Amir_6782 7914315 7914992 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: tgr:Tgr7_1366 lipoprotein releasing system%2C ATP-binding protein gene gene6855 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6782 Amir_6783 Amir_6783 Amir_6783 7914989 7917349 + protein of unknown function DUF214 PFAM: protein of unknown function DUF214~KEGG: mpt:Mpe_A2047 ABC transporter%2C permease protein gene gene6856 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6783 Amir_6784 Amir_6784 Amir_6784 7917471 7917581 + hypothetical protein gene gene6857 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6784 Amir_6785 Amir_6785 Amir_6785 7917578 7919938 + protein of unknown function DUF214 PFAM: protein of unknown function DUF214~KEGG: ank:AnaeK_1836 protein of unknown function DUF214 gene gene6858 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6785 Amir_6786 Amir_6786 Amir_6786 7919935 7922148 + protein of unknown function DUF214 PFAM: protein of unknown function DUF214~KEGG: rru:Rru_A3653 hypothetical protein gene gene6859 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6786 Amir_6787 Amir_6787 Amir_6787 7922212 7923312 + transcriptional regulator%2C Fis family KEGG: acp:A2cp1_2390 transcriptional regulator%2C Fis family gene gene6860 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6787 Amir_6788 Amir_6788 Amir_6788 7923320 7923532 + pseudogene gene6861 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6788 Amir_6789 Amir_6789 Amir_6789 7923983 7925308 + hypothetical protein KEGG: proteophosphoglycan 5 gene gene6862 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6789 Amir_6790 Amir_6790 Amir_6790 7925861 7927324 - transcriptional regulator%2C GntR family with aminotransferase domain PFAM: regulatory protein GntR HTH%3B aminotransferase class I and II~SMART: regulatory protein GntR HTH~KEGG: pzu:PHZ_c3113 transcriptional regulator%2C GntR family gene gene6863 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6790 Amir_6791 Amir_6791 Amir_6791 7927386 7928015 + protein of unknown function DUF161 PFAM: protein of unknown function DUF161~KEGG: pzu:PHZ_c3114 hypothetical protein gene gene6864 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6791 Amir_6792 Amir_6792 Amir_6792 7927984 7928526 - Clp domain protein PFAM: Clp domain protein~KEGG: ATP-dependent clp protease ATP-binding subunit gene gene6865 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6792 Amir_6793 Amir_6793 Amir_6793 7928523 7928735 - hypothetical protein gene gene6866 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6793 Amir_6794 Amir_6794 Amir_6794 7928818 7929588 + hypothetical protein KEGG: pap:PSPA7_0575 hypothetical protein gene gene6867 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6794 Amir_6795 Amir_6795 Amir_6795 7930622 7930867 - hypothetical protein gene gene6871 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6795 Amir_6796 Amir_6796 Amir_6796 7931033 7931359 + hypothetical protein KEGG: similar to corin gene gene6872 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6796 Amir_6797 Amir_6797 Amir_6797 7931418 7931630 + Heavy metal transport/detoxification protein PFAM: Heavy metal transport/detoxification protein~KEGG: dvm:DvMF_3169 heavy metal transport/detoxification protein gene gene6873 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6797 Amir_6798 Amir_6798 Amir_6798 7931636 7933855 + heavy metal translocating P-type ATPase TIGRFAM: heavy metal translocating P-type ATPase%3B copper-translocating P-type ATPase%3B ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC~PFAM: E1-E2 ATPase-associated domain protein%3B Heavy metal transport/detoxification protein%3B Haloacid dehalogenase domain protein hydrolase~KEGG: bsu:BSU33500 hypothetical protein gene gene6874 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6798 Amir_6799 Amir_6799 Amir_6799 7934057 7934374 + hypothetical protein gene gene6875 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6799 Amir_6800 Amir_6800 Amir_6800 7934557 7934760 - cold-shock DNA-binding domain protein PFAM: Cold-shock protein DNA-binding~SMART: Cold shock protein~KEGG: mpt:Mpe_A2202 cold-shock DNA-binding protein family protein gene gene6876 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6800 Amir_6801 Amir_6801 Amir_6801 7934976 7935803 - extracellular solute-binding protein family 3 PFAM: extracellular solute-binding protein family 3~SMART: extracellular solute-binding protein family 3~KEGG: bsu:BSU27440 glutamine ABC transporter (glutamine-binding protein) gene gene6877 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6801 Amir_6802 Amir_6802 Amir_6802 7936033 7936881 - conserved hypothetical protein KEGG: psa:PST_3300 hypothetical protein gene gene6878 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6802 Amir_6803 Amir_6803 Amir_6803 7937030 7937704 + hypothetical protein KEGG: Os02g0467200%3B hypothetical protein gene gene6879 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6803 Amir_6804 Amir_6804 Amir_6804 7937775 7942619 - conserved hypothetical protein KEGG: scl:sce5242 hypothetical protein gene gene6880 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6804 Amir_6805 Amir_6805 Amir_6805 7942616 7944622 - conserved hypothetical protein KEGG: mxa:MXAN_3571 hypothetical protein gene gene6881 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6805 Amir_6806 Amir_6806 Amir_6806 7944637 7945218 - conserved hypothetical protein KEGG: maq:Maqu_3701 hypothetical protein gene gene6882 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6806 Amir_6807 Amir_6807 Amir_6807 7945796 7946881 - Alcohol dehydrogenase zinc-binding domain protein PFAM: Alcohol dehydrogenase zinc-binding domain protein%3B Alcohol dehydrogenase GroES domain protein~KEGG: bac:BamMC406_6306 alcohol dehydrogenase gene gene6884 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6807 Amir_6808 Amir_6808 Amir_6808 7946878 7947345 - conserved hypothetical protein KEGG: spe:Spro_1171 hypothetical protein gene gene6885 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6808 Amir_6809 Amir_6809 Amir_6809 7947405 7947941 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: mes:Meso_3334 transcriptional regulator%2C TetR family gene gene6886 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6809 Amir_6810 Amir_6810 Amir_6810 7947996 7948826 + hypothetical protein gene gene6887 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6810 Amir_6811 Amir_6811 Amir_6811 7949037 7950218 + TIM-barrel protein%2C nifR3 family TIGRFAM: TIM-barrel protein%2C nifR3 family~PFAM: dihydrouridine synthase DuS~KEGG: hypothetical protein gene gene6888 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6811 Amir_6812 Amir_6812 Amir_6812 7950211 7950669 + hypothetical protein gene gene6889 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6812 Amir_6813 Amir_6813 Amir_6813 7950817 7951674 + diguanylate cyclase KEGG: rfr:Rfer_4028 diguanylate cyclase~TIGRFAM: diguanylate cyclase~PFAM: GGDEF domain containing protein~SMART: GGDEF domain containing protein gene gene6890 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6813 Amir_6814 Amir_6814 Amir_6814 7951977 7955987 + cell envelope-related transcriptional attenuator TIGRFAM: cell envelope-related function transcriptional attenuator%2C LytR/CpsA family~PFAM: cell envelope-related transcriptional attenuator~KEGG: SL44-1%3B basic proline-rich protein gene gene6891 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6814 Amir_6815 Amir_6815 Amir_6815 7956137 7956799 + phosphate uptake regulator%2C PhoU TIGRFAM: phosphate transport system regulatory protein PhoU~PFAM: PhoU family protein~KEGG: swi:Swit_3576 phosphate uptake regulator%2C PhoU gene gene6892 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6815 Amir_6816 Amir_6816 Amir_6816 7956860 7957660 - hypothetical protein gene gene6893 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6816 Amir_6817 Amir_6817 Amir_6817 7957657 7959354 - hypothetical protein KEGG: predicted gene%2C 100041170 gene gene6894 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6817 Amir_6818 Amir_6818 Amir_6818 7959603 7960379 - phosphate ABC transporter%2C ATPase subunit KEGG: gur:Gura_2561 phosphate ABC transporter%2C ATPase subunit~TIGRFAM: phosphate ABC transporter%2C ATPase subunit~PFAM: ABC transporter related~SMART: AAA ATPase gene gene6895 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6818 Amir_6819 Amir_6819 Amir_6819 7960390 7961304 - phosphate ABC transporter%2C inner membrane subunit PstA TIGRFAM: phosphate ABC transporter%2C inner membrane subunit PstA~PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: tbd:Tbd_1138 phosphate transport system permease protein 2 gene gene6896 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6819 Amir_6820 Amir_6820 Amir_6820 7961301 7962359 - phosphate ABC transporter%2C inner membrane subunit PstC TIGRFAM: phosphate ABC transporter%2C inner membrane subunit PstC~PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: bpy:Bphyt_2857 phosphate ABC transporter%2C inner membrane subunit PstC gene gene6897 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6820 Amir_6821 Amir_6821 Amir_6821 7962398 7963519 - phosphate ABC transporter%2C periplasmic phosphate- binding protein TIGRFAM: phosphate ABC transporter%2C periplasmic phosphate-binding protein~PFAM: extracellular solute-binding protein family 1~KEGG: scl:sce2946 phosphate ABC transporter%2C substrate-binding protein PstS gene gene6898 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6821 Amir_6822 Amir_6822 Amir_6822 7963712 7964605 - mycothiol biosynthesis acetyltransferase TIGRFAM: mycothiol biosynthesis acetyltransferase~PFAM: GCN5-related N-acetyltransferase~KEGG: predicted protein gene gene6899 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6822 Amir_6823 Amir_6823 Amir_6823 7964718 7965470 - putative two component transcriptional regulator%2C winged helix family PFAM: transcriptional regulator domain protein~KEGG: bha:BH3157 two-component response regulator involved in phosphate regulation gene gene6900 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6823 Amir_6824 Amir_6824 Amir_6824 7965529 7966380 + dipeptidylaminopeptidase/acylaminoacyl-peptidase-like protein KEGG: bha:BH1308 hypothetical protein gene gene6901 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6824 Amir_6825 Amir_6825 Amir_6825 7966377 7967183 + hypothetical protein KEGG: mxa:MXAN_7418 hypothetical protein gene gene6902 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6825 Amir_6826 Amir_6826 Amir_6826 7967224 7967646 + hypothetical protein KEGG: ank:AnaeK_1735 cytochrome c biogenesis protein transmembrane region gene gene6903 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6826 Amir_6827 Amir_6827 Amir_6827 7967881 7968315 + hypothetical protein KEGG: tdn:Suden_0151 CDP-alcohol phosphatidyltransferase gene gene6904 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6827 Amir_6828 Amir_6828 Amir_6828 7968424 7969269 + Rhodanese domain protein PFAM: Rhodanese domain protein~SMART: Rhodanese domain protein~KEGG: cja:CJA_2345 rhodanese-like domain protein gene gene6905 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6828 Amir_6829 Amir_6829 Amir_6829 7969269 7969571 + hypothetical protein KEGG: mxa:MXAN_0146 hypothetical protein gene gene6906 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6829 Amir_6830 Amir_6830 Amir_6830 7969777 7969875 + hypothetical protein gene gene6907 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6830 Amir_6831 Amir_6831 Amir_6831 7969875 7970510 + Domain of unknown function DUF1794 PFAM: Domain of unknown function DUF1794~KEGG: hypothetical protein gene gene6908 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6831 Amir_6832 Amir_6832 Amir_6832 7970839 7971441 + Allophanate hydrolase subunit 1 PFAM: Allophanate hydrolase subunit 1~SMART: Allophanate hydrolase subunit 1~KEGG: aav:Aave_3511 allophanate hydrolase subunit 2 gene gene6909 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6832 Amir_6833 Amir_6833 Amir_6833 7971556 7971711 + hypothetical protein gene gene6910 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6833 Amir_6834 Amir_6834 Amir_6834 7971708 7972565 + urea amidolyase related protein KEGG: aav:Aave_3511 allophanate hydrolase subunit 2~TIGRFAM: urea amidolyase related protein~PFAM: Allophanate hydrolase subunit 2~SMART: Allophanate hydrolase subunit 2 gene gene6911 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6834 Amir_6835 Amir_6835 Amir_6835 7972668 7973510 - aminotransferase class IV PFAM: aminotransferase class IV~KEGG: bbr:BB0169 class IV aminotransferase gene gene6912 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6835 Amir_6836 Amir_6836 Amir_6836 7973547 7973981 + ferric uptake regulator%2C Fur family PFAM: ferric-uptake regulator~KEGG: ank:AnaeK_2300 ferric uptake regulator%2C Fur family gene gene6913 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6836 Amir_6837 Amir_6837 Amir_6837 7973978 7975072 + folate-binding protein YgfZ TIGRFAM: folate-binding protein YgfZ~PFAM: glycine cleavage T protein (aminomethyl transferase)~KEGG: mxa:MXAN_6341 glycine cleavage system T protein gene gene6914 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6837 Amir_6838 Amir_6838 Amir_6838 7975127 7975927 + 3-keto-5-aminohexanoate cleavage enzyme PFAM: protein of unknown function DUF849~KEGG: rfr:Rfer_3885 hypothetical protein gene gene6915 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6838 Amir_6839 Amir_6839 Amir_6839 7975988 7976563 + hypothetical protein gene gene6916 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6839 Amir_6840 Amir_6840 Amir_6840 7976730 7977884 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: aav:Aave_4589 major facilitator superfamily MFS_1 gene gene6917 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6840 Amir_6841 Amir_6841 Amir_6841 7978110 7978991 - hypothetical protein KEGG: bch:Bcen2424_1641 amino acid adenylation domain-containing protein gene gene6918 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6841 Amir_6842 Amir_6842 Amir_6842 7979154 7979336 + hypothetical protein gene gene6919 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6842 Amir_6843 Amir_6843 Amir_6843 7979621 7980433 + conserved hypothetical protein KEGG: bpm:BURPS1710b_2246 hypothetical protein gene gene6920 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6843 Amir_6844 Amir_6844 Amir_6844 7980466 7981173 + transcriptional regulator%2C Crp/Fnr family PFAM: cyclic nucleotide-binding~SMART: cyclic nucleotide-binding~KEGG: dal:Dalk_5197 transcriptional regulator%2C Crp/Fnr family gene gene6921 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6844 Amir_6845 Amir_6845 Amir_6845 7981470 7981847 + hypothetical protein gene gene6922 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6845 Amir_6846 Amir_6846 Amir_6846 7981923 7983773 - thiamine pyrophosphate protein central region PFAM: thiamine pyrophosphate protein central region%3B thiamine pyrophosphate protein domain protein TPP- binding%3B thiamine pyrophosphate protein TPP binding domain protein~KEGG: bid:Bind_2834 thiamine pyrophosphate protein central region gene gene6923 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6846 Amir_6847 Amir_6847 Amir_6847 7983770 7984648 - Myo-inositol catabolism IolB domain protein PFAM: Myo-inositol catabolism IolB domain protein~KEGG: sus:Acid_1480 myo-inositol catabolism IolB domain-containing protein gene gene6924 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6847 Amir_6848 Amir_6848 Amir_6848 7984722 7985693 - PfkB domain protein PFAM: PfkB domain protein~KEGG: sus:Acid_1481 ribokinase-like domain- containing protein gene gene6925 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6848 Amir_6849 Amir_6849 Amir_6849 7985690 7986457 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: bcs:BCAN_A1367 hypothetical protein gene gene6926 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6849 Amir_6850 Amir_6850 Amir_6850 7986454 7987494 - Monosaccharide-transporting ATPase PFAM: inner-membrane translocator~KEGG: acr:Acry_2317 inner-membrane translocator gene gene6927 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6850 Amir_6851 Amir_6851 Amir_6851 7987500 7988507 - periplasmic binding protein/LacI transcriptional regulator PFAM: periplasmic binding protein/LacI transcriptional regulator~KEGG: acr:Acry_2318 ABC-type sugar transport system periplasmic component-like protein gene gene6928 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6851 Amir_6852 Amir_6852 Amir_6852 7988569 7989423 - Xylose isomerase domain protein TIM barrel PFAM: Xylose isomerase domain protein TIM barrel~KEGG: sit:TM1040_3346 xylose isomerase-like TIM barrel gene gene6929 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6852 Amir_6853 Amir_6853 Amir_6853 7989420 7990436 - Inositol 2-dehydrogenase PFAM: oxidoreductase domain protein%3B Oxidoreductase domain~KEGG: bbt:BBta_0488 inositol 2-dehydrogenase gene gene6930 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6853 Amir_6854 Amir_6854 Amir_6854 7990575 7991567 + transcriptional regulator%2C LacI family PFAM: periplasmic binding protein/LacI transcriptional regulator%3B regulatory protein LacI~SMART: regulatory protein LacI~KEGG: pmr:PMI0088 ribose operon repressor (LacI- family transcriptional regulator) gene gene6931 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6854 Amir_6855 Amir_6855 Amir_6855 7992407 7992820 - Class I peptide chain release factor PFAM: Class I peptide chain release factor~KEGG: rpi:Rpic_3102 class I peptide chain release factor gene gene6932 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6855 Amir_6856 Amir_6856 Amir_6856 7992852 7993388 - hypothetical protein KEGG: hypothetical protein gene gene6933 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6856 Amir_6857 Amir_6857 Amir_6857 7993385 7994209 - helix-turn-helix domain protein SMART: helix-turn-helix domain protein gene gene6934 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6857 Amir_6858 Amir_6858 Amir_6858 7994557 7995630 - phosphoribosylformylglycinamidine cyclo-ligase KEGG: mxa:MXAN_2701 phosphoribosylformylglycinamidine cyclo-ligase~TIGRFAM: phosphoribosylformylglycinamidine cyclo- ligase~PFAM: AIR synthase related protein domain protein%3B AIR synthase related protein gene gene6935 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6858 Amir_6859 Amir_6859 Amir_6859 7995633 7997210 - amidophosphoribosyltransferase TIGRFAM: amidophosphoribosyltransferase~PFAM: glutamine amidotransferase class-II%3B phosphoribosyltransferase~KEGG: acp:A2cp1_4361 amidophosphoribosyltransferase gene gene6936 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6859 Amir_6860 Amir_6860 Amir_6860 7997279 7998022 - protein of unknown function DUF1503 PFAM: protein of unknown function DUF1503 gene gene6937 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6860 Amir_6861 Amir_6861 Amir_6861 7998232 7998546 + hypothetical protein gene gene6938 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6861 Amir_6862 Amir_6862 Amir_6862 7998543 8000507 + protein of unknown function DUF1023 PFAM: protein of unknown function DUF1023~KEGG: xca:xccb100_3697 putative outer membrane adhesin gene gene6939 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6862 Amir_6863 Amir_6863 Amir_6863 8000547 8000885 - hypothetical protein gene gene6940 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6863 Amir_6864 Amir_6864 Amir_6864 8000937 8001272 - hypothetical protein gene gene6941 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6864 Amir_6865 Amir_6865 Amir_6865 8001309 8001686 - hypothetical protein gene gene6942 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6865 Amir_6866 Amir_6866 Amir_6866 8001696 8002514 - hypothetical protein gene gene6943 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6866 Amir_6867 Amir_6867 Amir_6867 8002599 8004083 - hypothetical protein KEGG: hypothetical protein gene gene6944 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6867 Amir_6868 Amir_6868 Amir_6868 8004100 8004492 - hypothetical protein gene gene6945 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6868 Amir_6869 Amir_6869 Amir_6869 8004611 8005225 - hypothetical protein gene gene6946 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6869 Amir_6870 Amir_6870 Amir_6870 8005343 8006374 + Alcohol dehydrogenase GroES domain protein PFAM: Alcohol dehydrogenase GroES domain protein%3B Alcohol dehydrogenase zinc-binding domain protein~KEGG: scl:sce1528 glucose 1-dehydrogenase gene gene6947 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6870 Amir_6871 Amir_6871 Amir_6871 8006391 8008553 - diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) KEGG: gsu:GSU0474 sensory box/GGDEF family protein~TIGRFAM: diguanylate cyclase%3B PAS sensor protein~PFAM: EAL domain protein%3B PAS fold-3 domain protein%3B GGDEF domain containing protein%3B PAS fold domain protein%3B PAS fold-4 domain protein~SMART: EAL domain protein%3B GGDEF domain containing protein%3B PAC repeat-containing protein%3B PAS domain containing protein gene gene6948 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6871 Amir_6872 Amir_6872 Amir_6872 8008889 8009977 + hypothetical protein KEGG: predicted protein gene gene6949 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6872 Amir_6873 Amir_6873 Amir_6873 8009974 8010922 + pseudogene gene6950 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6873 Amir_6874 Amir_6874 Amir_6874 8011169 8012017 + Lysozyme KEGG: N%2CO-diacetylmuramidase~PFAM: glycoside hydrolase family 25~SMART: glycoside hydrolase family 25 gene gene6951 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6874 Amir_6875 Amir_6875 Amir_6875 8012143 8012931 + Lysozyme KEGG: N%2CO-diacetyl muramidase%3B K01238~PFAM: glycoside hydrolase family 25~SMART: glycoside hydrolase family 25 gene gene6952 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6875 Amir_6876 Amir_6876 Amir_6876 8012996 8015254 - phosphoribosylformylglycinamidine synthase II KEGG: ade:Adeh_4214 phosphoribosylformylglycinamidine synthase II~TIGRFAM: phosphoribosylformylglycinamidine synthase II~PFAM: AIR synthase related protein domain protein%3B AIR synthase related protein gene gene6953 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6876 Amir_6877 Amir_6877 Amir_6877 8015251 8015922 - phosphoribosylformylglycinamidine synthase I TIGRFAM: phosphoribosylformylglycinamidine synthase I~KEGG: afw:Anae109_3954 phosphoribosylformylglycinamidine synthase I gene gene6954 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6877 Amir_6878 Amir_6878 Amir_6878 8015919 8016158 - phosphoribosylformylglycinamidine synthase%2C purS TIGRFAM: phosphoribosylformylglycinamidine synthase%2C purS~PFAM: phosphoribosylformylglycinamidine synthetase PurS~KEGG: eli:ELI_02445 phosphoribosylformylglycinamidine synthase small subunit gene gene6955 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6878 Amir_6879 Amir_6879 Amir_6879 8016387 8016929 - hypothetical protein gene gene6956 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6879 Amir_6880 Amir_6880 Amir_6880 8017050 8018024 + NAD-dependent epimerase/dehydratase PFAM: NAD-dependent epimerase/dehydratase%3B Male sterility domain~KEGG: bja:blr6721 putative reductase gene gene6957 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6880 Amir_6881 Amir_6881 Amir_6881 8018150 8018773 + beta-lactamase domain protein PFAM: beta-lactamase domain protein~KEGG: acr:Acry_1778 hydroxyacylglutathione hydrolase gene gene6958 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6881 Amir_6882 Amir_6882 Amir_6882 8018744 8019403 - deacetylase-like protein KEGG: eba:ebA6939 hypothetical protein gene gene6959 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6882 Amir_6883 Amir_6883 Amir_6883 8019558 8020445 - phosphoribosylaminoimidazole-succinocarboxamides ynthase KEGG: aba:Acid345_2258 phosphoribosylaminoimidazole- succinocarboxamide synthase~TIGRFAM: phosphoribosylaminoimidazole- succinocarboxamide synthase~PFAM: SAICAR synthetase gene gene6960 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6883 Amir_6884 Amir_6884 Amir_6884 8020509 8021366 + extracellular solute-binding protein family 3 PFAM: extracellular solute-binding protein family 3~SMART: extracellular solute-binding protein family 3~KEGG: rde:RD1_2182 amino acid ABC transporter%2C periplasmic-binding protein%2C putative gene gene6961 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6884 Amir_6885 Amir_6885 Amir_6885 8021363 8022223 + polar amino acid ABC transporter%2C inner membrane subunit TIGRFAM: polar amino acid ABC transporter%2C inner membrane subunit~PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: rde:RD1_2183 glutamine ABC transporter%2C permease protein%2C putative gene gene6962 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6885 Amir_6886 Amir_6886 Amir_6886 8022220 8022984 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: mes:Meso_3147 ABC transporter related gene gene6963 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6886 Amir_6887 Amir_6887 Amir_6887 8023065 8023544 + hypothetical protein KEGG: similar to C25F9.2 gene gene6964 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6887 Amir_6888 Amir_6888 Amir_6888 8023612 8025042 - adenylosuccinate lyase TIGRFAM: adenylosuccinate lyase~PFAM: fumarate lyase~KEGG: hypothetical protein%3B K01756 adenylosuccinate lyase gene gene6965 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6888 Amir_6889 Amir_6889 Amir_6889 8025056 8025847 - hypothetical protein gene gene6966 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6889 Amir_6890 Amir_6890 Amir_6890 8025844 8026371 - RNA polymerase%2C sigma-24 subunit%2C ECF subfamily TIGRFAM: RNA polymerase sigma-70 factor%2C sigma-E family%3B RNA polymerase sigma factor%2C sigma-70 family~PFAM: Sigma-70 region 4 type 2%3B sigma-70 region 2 domain protein%3B sigma-70 region 4 domain protein~KEGG: sus:Acid_7940 ECF subfamily RNA polymerase sigma-24 factor gene gene6967 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6890 Amir_6891 Amir_6891 Amir_6891 8026418 8027008 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: scl:sce1385 TetR family transcriptional regulator gene gene6968 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6891 Amir_6892 Amir_6892 Amir_6892 8027064 8027825 - hypothetical protein KEGG: GK23094 gene product from transcript GK23094- RA gene gene6969 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6892 Amir_6893 Amir_6893 Amir_6893 8027863 8028378 - RNA polymerase%2C sigma-24 subunit%2C ECF subfamily TIGRFAM: RNA polymerase sigma-70 factor%2C sigma-E family%3B RNA polymerase sigma factor%2C sigma-70 family~PFAM: Sigma-70 region 4 type 2%3B sigma-70 region 2 domain protein%3B sigma-70 region 4 domain protein~KEGG: pca:Pcar_3124 RNA polymerase%2C sigma-E factor gene gene6970 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6893 Amir_6894 Amir_6894 Amir_6894 8028531 8029550 + aromatic amino acid beta-eliminating lyase/threonine aldolase PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase~KEGG: mxa:MXAN_1432 L-allo-threonine aldolase gene gene6971 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6894 Amir_6895 Amir_6895 Amir_6895 8029555 8030142 + HAD-superfamily hydrolase%2C subfamily IA%2C variant 3 TIGRFAM: HAD-superfamily hydrolase%2C subfamily IA%2C variant 3~PFAM: Haloacid dehalogenase domain protein hydrolase~KEGG: aba:Acid345_0142 HAD-superfamily hydrolase subfamily IA%2C variant 3 gene gene6972 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6895 Amir_6896 Amir_6896 Amir_6896 8030251 8030403 - hypothetical protein gene gene6973 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6896 Amir_6897 Amir_6897 Amir_6897 8030410 8031576 - aminotransferase class I and II PFAM: aminotransferase class I and II~KEGG: scl:sce5648 aspartate transaminase gene gene6974 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6897 Amir_6898 Amir_6898 Amir_6898 8031586 8032116 - hypothetical protein gene gene6975 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6898 Amir_6899 Amir_6899 Amir_6899 8032236 8033012 - hypothetical protein KEGG: ret:RHE_PE00455 sulfite reductase%2C beta subunit (hemoprotein) protein gene gene6976 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6899 Amir_6900 Amir_6900 Amir_6900 8033009 8034322 - hypothetical protein KEGG: Os03g0309300%3B hypothetical protein gene gene6977 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6900 Amir_6901 Amir_6901 Amir_6901 8034335 8034937 - hypothetical protein gene gene6978 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6901 Amir_6902 Amir_6902 Amir_6902 8034927 8035277 - hypothetical protein gene gene6979 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6902 Amir_6903 Amir_6903 Amir_6903 8035608 8036867 - phosphoribosylamine/glycine ligase KEGG: ccs:CCNA_00299 phosphoribosylamine--glycine ligase~TIGRFAM: phosphoribosylamine/glycine ligase~PFAM: phosphoribosylglycinamide synthetase gene gene6980 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6903 Amir_6904 Amir_6904 Amir_6904 8036896 8037885 - TRAP transporter solute receptor%2C TAXI family TIGRFAM: TRAP transporter solute receptor%2C TAXI family~KEGG: bpt:Bpet4159 hypothetical protein gene gene6981 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6904 Amir_6905 Amir_6905 Amir_6905 8037878 8039926 - TRAP transporter%2C 4TM/12TM fusion protein TIGRFAM: TRAP transporter%2C 4TM/12TM fusion protein~PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit%3B Citrate transporter~KEGG: bpt:Bpet4158 hypothetical protein gene gene6982 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6905 Amir_6906 Amir_6906 Amir_6906 8040106 8041251 + glycerophosphoryl diester phosphodiesterase PFAM: glycerophosphoryl diester phosphodiesterase~KEGG: rce:RC1_0289 glycerophosphoryl diester phosphodiesterase gene gene6983 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6906 Amir_6907 Amir_6907 Amir_6907 8041402 8042544 - Alkanesulfonate monooxygenase PFAM: Luciferase-like monooxygenase~KEGG: alkanesulfonate monooxygenase gene gene6984 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6907 Amir_6908 Amir_6908 Amir_6908 8042834 8044123 - adenylosuccinate synthetase KEGG: bat:BAS5320 adenylosuccinate synthetase~TIGRFAM: adenylosuccinate synthetase~PFAM: adenylosuccinate synthetase~SMART: adenylosuccinate synthetase gene gene6985 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6908 Amir_6909 Amir_6909 Amir_6909 8044218 8044889 + hypothetical protein gene gene6986 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6909 Amir_6910 Amir_6910 Amir_6910 8045008 8045646 + conserved hypothetical protein KEGG: hypothetical protein gene gene6987 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6910 Amir_6911 Amir_6911 Amir_6911 8045646 8045897 + hypothetical protein gene gene6988 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6911 Amir_6912 Amir_6912 Amir_6912 8045952 8046938 + glycoside hydrolase family 16 PFAM: glycoside hydrolase family 16~KEGG: hch:HCH_06576 hypothetical protein gene gene6989 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6912 Amir_6913 Amir_6913 Amir_6913 8047101 8047364 - hypothetical protein KEGG: son:SO_3323 acetyltransferase gene gene6990 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6913 Amir_6914 Amir_6914 Amir_6914 8047983 8049062 - putative membrane protein KEGG: dac:Daci_3973 hypothetical protein gene gene6991 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6914 Amir_6915 Amir_6915 Amir_6915 8049076 8049489 - hypothetical protein gene gene6992 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6915 Amir_6916 Amir_6916 Amir_6916 8049496 8049591 - hypothetical protein gene gene6993 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6916 Amir_6917 Amir_6917 Amir_6917 8049811 8050845 - fructose-bisphosphate aldolase%2C class II KEGG: sfu:Sfum_1469 fructose-bisphosphate aldolase%2C class II~TIGRFAM: fructose-bisphosphate aldolase%2C class II%3B ketose-bisphosphate aldolase~PFAM: ketose-bisphosphate aldolase class-II gene gene6994 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6917 Amir_6918 Amir_6918 Amir_6918 8050940 8051224 + protein of unknown function DUF427 PFAM: protein of unknown function DUF427~KEGG: pnu:Pnuc_1659 hypothetical protein gene gene6995 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6918 Amir_6919 Amir_6919 Amir_6919 8051373 8052311 + aldo/keto reductase PFAM: aldo/keto reductase~KEGG: ank:AnaeK_0485 aldo/keto reductase gene gene6996 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6919 Amir_6920 Amir_6920 Amir_6920 8052383 8053312 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B KR domain protein~KEGG: bch:Bcen2424_6846 short-chain dehydrogenase/reductase SDR gene gene6997 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6920 Amir_6921 Amir_6921 Amir_6921 8053335 8053622 - YCII-related protein PFAM: YCII-related~KEGG: reu:Reut_B5221 YCII-related gene gene6998 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6921 Amir_6922 Amir_6922 Amir_6922 8053686 8054264 + RNA polymerase%2C sigma-24 subunit%2C ECF subfamily TIGRFAM: RNA polymerase sigma-70 factor%2C sigma-E family%3B RNA polymerase sigma factor%2C sigma-70 family~PFAM: Sigma-70 region 4 type 2%3B sigma-70 region 2 domain protein%3B sigma-70 region 4 domain protein~KEGG: mxa:MXAN_2500 RNA polymerase sigma-70 factor%2C ECF subfamily gene gene6999 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6922 Amir_6923 Amir_6923 Amir_6923 8054467 8055366 + ROK family protein PFAM: ROK family protein~KEGG: scl:sce7667 ROK family transcriptional regulator gene gene7000 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6923 Amir_6924 Amir_6924 Amir_6924 8055363 8056520 + N-acetylglucosamine-6-phosphate deacetylase KEGG: smt:Smal_3421 N-acetylglucosamine-6-phosphate deacetylase~TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase~PFAM: amidohydrolase gene gene7001 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6924 Amir_6925 Amir_6925 Amir_6925 8056549 8057331 + hypothetical protein KEGG: hypothetical protein gene gene7002 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6925 Amir_6926 Amir_6926 Amir_6926 8057341 8058090 + SNARE associated Golgi protein PFAM: SNARE associated Golgi protein~KEGG: pfo:Pfl01_4994 hypothetical protein gene gene7003 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6926 Amir_6927 Amir_6927 Amir_6927 8058097 8059482 - FAD linked oxidase domain protein PFAM: FAD linked oxidase domain protein~KEGG: scl:sce0752 putative glycolate oxidase gene gene7004 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6927 Amir_6928 Amir_6928 Amir_6928 8059601 8060275 + SNARE associated Golgi protein PFAM: SNARE associated Golgi protein~KEGG: plu:plu3172 hypothetical protein gene gene7005 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6928 Amir_6929 Amir_6929 Amir_6929 8060306 8060941 - conserved hypothetical protein KEGG: dac:Daci_0781 hypothetical protein gene gene7006 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6929 Amir_6930 Amir_6930 Amir_6930 8060923 8061864 - PfkB domain protein PFAM: PfkB domain protein~KEGG: sfu:Sfum_3386 PfkB domain protein gene gene7007 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6930 Amir_6931 Amir_6931 Amir_6931 8061943 8062890 + transcriptional regulator%2C LacI family PFAM: periplasmic binding protein/LacI transcriptional regulator%3B regulatory protein LacI~SMART: regulatory protein LacI~KEGG: acr:Acry_0501 periplasmic binding protein/LacI transcriptional regulator gene gene7008 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6931 Amir_6932 Amir_6932 Amir_6932 8062919 8064034 - glycoside hydrolase family 76 PFAM: glycoside hydrolase family 76~KEGG: hypothetical protein gene gene7009 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6932 Amir_6933 Amir_6933 Amir_6933 8064053 8064760 - tRNA/rRNA methyltransferase (SpoU) PFAM: tRNA/rRNA methyltransferase (SpoU)%3B RNA 2-O ribose methyltransferase substrate binding~KEGG: azo:azo1893 RNA methyltransferase gene gene7010 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6933 Amir_6934 Amir_6934 Amir_6934 8064832 8065221 - hypothetical protein KEGG: eba:ebB138 hypothetical protein gene gene7011 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6934 Amir_6935 Amir_6935 Amir_6935 8065297 8066007 - hypothetical protein gene gene7012 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6935 Amir_6936 Amir_6936 Amir_6936 8066009 8066563 - orotate phosphoribosyltransferase KEGG: ppd:Ppro_1154 orotate phosphoribosyltransferase~TIGRFAM: orotate phosphoribosyltransferase~PFAM: phosphoribosyltransferase gene gene7013 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6936 Amir_6937 Amir_6937 Amir_6937 8066630 8067184 + hypothetical protein gene gene7014 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6937 Amir_6938 Amir_6938 Amir_6938 8067217 8067621 - hypothetical protein gene gene7015 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6938 Amir_6939 Amir_6939 Amir_6939 8067618 8068526 - hypothetical protein gene gene7016 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6939 Amir_6940 Amir_6940 Amir_6940 8068523 8068876 - hypothetical protein gene gene7017 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6940 Amir_6941 Amir_6941 Amir_6941 8069021 8069800 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B KR domain protein%3B Male sterility domain%3B NAD-dependent epimerase/dehydratase~KEGG: azc:AZC_1379 short-chain dehydrogenase gene gene7018 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6941 Amir_6942 Amir_6942 Amir_6942 8069797 8070501 - hypothetical protein gene gene7019 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6942 Amir_6943 Amir_6943 Amir_6943 8070630 8073212 - ATP-dependent chaperone ClpB KEGG: ank:AnaeK_0413 ATP-dependent chaperone ClpB~TIGRFAM: ATP-dependent chaperone ClpB~PFAM: ATPase AAA-2 domain protein%3B AAA ATPase central domain protein%3B Torsin%3B ATPase associated with various cellular activities AAA_5%3B Clp domain protein~SMART: AAA ATPase gene gene7020 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6943 Amir_6944 Amir_6944 Amir_6944 8073413 8073808 + conserved hypothetical protein KEGG: rle:RL3033 hypothetical protein gene gene7021 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6944 Amir_6945 Amir_6945 Amir_6945 8074275 8075378 + Oxidoreductase FAD-binding domain protein PFAM: Oxidoreductase FAD-binding domain protein%3B oxidoreductase FAD/NAD(P)-binding domain protein%3B globin~KEGG: afr:AFE_0860 iron-sulfur cluster-binding protein/oxidoreductase%2C FAD/NAD-binding gene gene7022 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6945 Amir_6946 Amir_6946 Amir_6946 8075838 8076269 - transcriptional regulator%2C MerR family PFAM: regulatory protein MerR~SMART: regulatory protein MerR~KEGG: cjj:CJJ81176_1244 MerR family transcriptional regulator gene gene7023 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6946 Amir_6947 Amir_6947 Amir_6947 8076266 8077462 - chaperone protein DnaJ KEGG: pag:PLES_51451 DnaJ protein~TIGRFAM: chaperone protein DnaJ~PFAM: chaperone DnaJ domain protein%3B heat shock protein DnaJ domain protein%3B DnaJ central domain protein~SMART: heat shock protein DnaJ domain protein gene gene7024 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6947 Amir_6948 Amir_6948 Amir_6948 8077483 8078136 - GrpE protein PFAM: GrpE protein~KEGG: dvm:DvMF_1194 GrpE protein gene gene7025 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6948 Amir_6949 Amir_6949 Amir_6949 8078133 8079992 - chaperone protein DnaK KEGG: gme:Gmet_3532 chaperone DnaK~TIGRFAM: chaperone protein DnaK~PFAM: Heat shock protein 70 gene gene7026 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6949 Amir_6950 Amir_6950 Amir_6950 8080207 8081013 - hypothetical protein KEGG: aba:Acid345_3530 hypothetical protein gene gene7027 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6950 Amir_6951 Amir_6951 Amir_6951 8081179 8081754 - hypothetical protein gene gene7028 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6951 Amir_6952 Amir_6952 Amir_6952 8081915 8082244 - small multidrug resistance protein PFAM: small multidrug resistance protein~KEGG: oan:Oant_2259 small multidrug resistance protein gene gene7029 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6952 Amir_6953 Amir_6953 Amir_6953 8082402 8084678 + protein of unknown function DUF224 cysteine-rich region domain protein PFAM: protein of unknown function DUF224 cysteine- rich region domain protein%3B 4Fe-4S ferredoxin iron-sulfur binding domain protein~KEGG: ade:Adeh_0008 hypothetical protein gene gene7030 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6953 Amir_6954 Amir_6954 Amir_6954 8084757 8085137 - membrane protein of unknown function PFAM: membrane protein of unknown function~KEGG: bmv:BMASAVP1_A3416 hypothetical protein gene gene7031 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6954 Amir_6955 Amir_6955 Amir_6955 8085172 8086362 - hypothetical protein KEGG: dsh:Dshi_3592 Cna B domain-containing protein gene gene7032 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6955 Amir_6956 Amir_6956 Amir_6956 8086602 8087444 - hypothetical protein KEGG: gme:Gmet_2043 hypothetical protein gene gene7033 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6956 Amir_6957 Amir_6957 Amir_6957 8087622 8088740 - hypothetical protein KEGG: gme:Gmet_2043 hypothetical protein gene gene7034 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6957 Amir_6958 Amir_6958 Amir_6958 8088946 8090061 - LPXTG-motif cell wall anchor domain protein TIGRFAM: LPXTG-motif cell wall anchor domain protein~KEGG: dsh:Dshi_3592 Cna B domain-containing protein gene gene7035 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6958 Amir_6959 Amir_6959 Amir_6959 8090391 8091026 - deoxycytidine triphosphate deaminase TIGRFAM: deoxycytidine triphosphate deaminase~PFAM: deoxyUTP pyrophosphatase~KEGG: tcx:Tcr_1043 deoxycytidine triphosphate deaminase gene gene7036 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6959 Amir_6960 Amir_6960 Amir_6960 8091736 8092320 + hypothetical protein KEGG: similar to involucrin repeat protein%2C putative gene gene7038 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6960 Amir_6961 Amir_6961 Amir_6961 8092372 8093973 - Na+/solute symporter PFAM: Na+/solute symporter~KEGG: vsp:VS_1257 putative sodium/glucose cotransporter gene gene7039 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6961 Amir_6962 Amir_6962 Amir_6962 8094222 8094926 + two component transcriptional regulator%2C LuxR family PFAM: regulatory protein LuxR%3B response regulator receiver~SMART: regulatory protein LuxR~KEGG: xcv:XCV2187 two-component system LuxR family regulatory protein gene gene7040 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6962 Amir_6963 Amir_6963 Amir_6963 8095175 8097013 + acyl-CoA dehydrogenase domain protein PFAM: acyl-CoA dehydrogenase domain protein~KEGG: mxa:MXAN_0422 acyl-CoA dehydrogenase gene gene7041 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6963 Amir_6964 Amir_6964 Amir_6964 8097110 8097853 - protein of unknown function DUF1206 PFAM: protein of unknown function DUF1206~KEGG: afw:Anae109_1905 hypothetical protein gene gene7042 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6964 Amir_6965 Amir_6965 Amir_6965 8097981 8100659 - VanW family protein PFAM: VanW family protein~KEGG: bcb:BCB4264_A0642 vancomycin B-type resistance protein VanW gene gene7043 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6965 Amir_6966 Amir_6966 Amir_6966 8100739 8101059 - chaperonin Cpn10 PFAM: chaperonin Cpn10~KEGG: noc:Noc_2922 co-chaperonin GroES gene gene7044 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6966 Amir_6967 Amir_6967 Amir_6967 8101121 8102959 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen%3B NHL repeat containing protein%3B Redoxin domain protein~KEGG: haloacid dehalogenase-like hydrolase family protein gene gene7045 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6967 Amir_6968 Amir_6968 Amir_6968 8103057 8103425 - hypothetical protein gene gene7046 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6968 Amir_6969 Amir_6969 Amir_6969 8103886 8104032 - hypothetical protein gene gene7047 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6969 Amir_6970 Amir_6970 Amir_6970 8104288 8104953 + protein of unknown function DUF541 PFAM: protein of unknown function DUF541~KEGG: bra:BRADO0381 hypothetical protein gene gene7048 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6970 Amir_6971 Amir_6971 Amir_6971 8105070 8106293 - OmpA/MotB domain protein PFAM: OmpA/MotB domain protein~KEGG: dsh:Dshi_3025 OmpA/MotB domain-containing protein gene gene7049 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6971 Amir_6972 Amir_6972 Amir_6972 8106378 8107643 - acetyl-CoA acetyltransferase TIGRFAM: acetyl-CoA acetyltransferase~PFAM: Thiolase~KEGG: pmy:Pmen_0745 acetyl-CoA acetyltransferase gene gene7050 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6972 Amir_6973 Amir_6973 Amir_6973 8107725 8109197 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B KR domain protein~KEGG: rpi:Rpic_0416 short-chain dehydrogenase/reductase SDR gene gene7051 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6973 Amir_6974 Amir_6974 Amir_6974 8109197 8110000 + MaoC domain protein dehydratase PFAM: MaoC domain protein dehydratase~KEGG: abo:ABO_1719 MaoC like domain-containing protein gene gene7052 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6974 Amir_6975 Amir_6975 Amir_6975 8110031 8110583 + pseudogene gene7053 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6975 Amir_6976 Amir_6976 Amir_6976 8110592 8111455 + pseudogene gene7054 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6976 Amir_6977 Amir_6977 Amir_6977 8111546 8112760 - acyl-CoA dehydrogenase domain protein PFAM: acyl-CoA dehydrogenase domain protein%3B Acyl- CoA dehydrogenase type 2 domain~KEGG: afw:Anae109_2163 acyl-CoA dehydrogenase domain-containing protein gene gene7055 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6977 Amir_6978 Amir_6978 Amir_6978 8112762 8113400 - hypothetical protein KEGG: hsdl2%3B Hydroxysteroid dehydrogenase-like protein 2 gene gene7056 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6978 Amir_6979 Amir_6979 Amir_6979 8113502 8114164 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: bav:BAV3196 TetR-family trasncriptional regulator gene gene7057 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6979 Amir_6980 Amir_6980 Amir_6980 8114416 8115315 - transcriptional regulator%2C MerR family PFAM: regulatory protein MerR~SMART: regulatory protein MerR~KEGG: sal:Sala_2443 MerR family transcriptional regulator gene gene7058 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6980 Amir_6981 Amir_6981 Amir_6981 8115420 8116772 - catalytic domain of components of various dehydrogenase complexes PFAM: catalytic domain of components of various dehydrogenase complexes%3B biotin/lipoyl attachment domain- containing protein%3B E3 binding domain protein~KEGG: bha:BH2653 branched-chain alpha-keto acid dehydrogenase subunit E2 gene gene7059 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6981 Amir_6982 Amir_6982 Amir_6982 8116783 8117805 - Transketolase central region PFAM: Transketolase central region%3B Transketolase domain protein~KEGG: afw:Anae109_1994 transketolase central region gene gene7060 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6982 Amir_6983 Amir_6983 Amir_6983 8117805 8118998 - pyruvate dehydrogenase (acetyl-transferring) E1 component%2C alpha subunit KEGG: gme:Gmet_2509 dehydrogenase%2C E1 component~TIGRFAM: pyruvate dehydrogenase (acetyl- transferring) E1 component%2C alpha subunit~PFAM: dehydrogenase E1 component gene gene7061 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6983 Amir_6984 Amir_6984 Amir_6984 8119338 8120747 + peptidase M20 PFAM: peptidase M20%3B peptidase dimerization domain protein~KEGG: xca:xccb100_1378 hypothetical protein gene gene7062 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6984 Amir_6985 Amir_6985 Amir_6985 8120931 8123618 + conserved hypothetical protein KEGG: sus:Acid_7132 hypothetical protein gene gene7063 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6985 Amir_6986 Amir_6986 Amir_6986 8123790 8124605 + extracellular solute-binding protein family 3 PFAM: extracellular solute-binding protein family 3~SMART: extracellular solute-binding protein family 3%3B ionotropic glutamate receptor~KEGG: acr:Acry_0683 extracellular solute-binding protein gene gene7064 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6986 Amir_6987 Amir_6987 Amir_6987 8124672 8125508 + polar amino acid ABC transporter%2C inner membrane subunit TIGRFAM: polar amino acid ABC transporter%2C inner membrane subunit~PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: acr:Acry_0684 polar amino acid ABC transporter%2C inner membrane subunit gene gene7065 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6987 Amir_6988 Amir_6988 Amir_6988 8125505 8126302 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: acr:Acry_0685 ABC transporter related gene gene7066 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6988 Amir_6989 Amir_6989 Amir_6989 8126304 8128442 + hypothetical protein KEGG: rce:RC1_0389 hypothetical protein gene gene7067 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6989 Amir_6990 Amir_6990 Amir_6990 8128546 8129391 + hypothetical protein KEGG: Os02g0127100%3B hypothetical protein gene gene7068 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6990 Amir_6991 Amir_6991 Amir_6991 8129388 8130407 + hypothetical protein gene gene7069 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6991 Amir_6992 Amir_6992 Amir_6992 8130404 8131534 + hypothetical protein KEGG: mxa:MXAN_1088 serine-threonine protein kinase gene gene7070 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6992 Amir_6993 Amir_6993 Amir_6993 8131665 8132345 + hypothetical protein KEGG: GL23092 gene product from transcript GL23092- RA gene gene7071 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6993 Amir_6994 Amir_6994 Amir_6994 8133054 8134865 + Phosphoenolpyruvate carboxykinase (GTP) PFAM: phosphoenolpyruvate carboxykinase (GTP)~KEGG: pzu:PHZ_c2232 phosphoenolpyruvate carboxykinase (GTP) gene gene7072 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6994 Amir_6995 Amir_6995 Amir_6995 8135361 8136191 - hypothetical protein KEGG: hypothetical protein gene gene7073 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6995 Amir_6996 Amir_6996 Amir_6996 8136356 8137858 - hypothetical protein KEGG: pap:PSPA7_0052 hypothetical protein gene gene7074 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6996 Amir_6997 Amir_6997 Amir_6997 8138036 8138734 + transcriptional regulator%2C GntR family PFAM: regulatory protein GntR HTH%3B GntR domain protein~SMART: regulatory protein GntR HTH~KEGG: reu:Reut_A2447 GntR family transcriptional regulator gene gene7075 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6997 Amir_6998 Amir_6998 Amir_6998 8138931 8139209 + hypothetical protein KEGG: bur:Bcep18194_A5681 hypothetical protein gene gene7076 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6998 Amir_6999 Amir_6999 Amir_6999 8139206 8140855 + Na+/solute symporter PFAM: Na+/solute symporter~KEGG: bvi:Bcep1808_2427 Na+/solute symporter gene gene7077 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_6999 Amir_7000 Amir_7000 Amir_7000 8140833 8141759 - ROK family protein PFAM: ROK family protein~KEGG: mlo:mlr7234 glucose kinase gene gene7078 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7000 Amir_7001 Amir_7001 Amir_7001 8141781 8142029 - pseudogene gene7079 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7001 Amir_7002 Amir_7002 Amir_7002 8142133 8142999 + transcriptional regulator%2C XRE family PFAM: helix-turn-helix domain protein~SMART: helix-turn-helix domain protein gene gene7080 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7002 Amir_7003 Amir_7003 Amir_7003 8143000 8143254 + protein of unknown function DUF397 PFAM: protein of unknown function DUF397 gene gene7081 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7003 Amir_7004 Amir_7004 Amir_7004 8143229 8145061 - GTP-binding protein HSR1-related PFAM: GTP-binding protein HSR1-related~KEGG: mca:MCA1193 hypothetical protein gene gene7082 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7004 Amir_7005 Amir_7005 Amir_7005 8145058 8145432 - hypothetical protein KEGG: mno:Mnod_1146 GrpE protein gene gene7083 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7005 Amir_7006 Amir_7006 Amir_7006 8145429 8146922 - hypothetical protein KEGG: cha:CHAB381_0860 GTP-binding protein gene gene7084 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7006 Amir_7007 Amir_7007 Amir_7007 8147162 8147929 + hypothetical protein KEGG: Sfrs15%3B splicing factor%2C arginine/serine-rich 15 gene gene7085 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7007 Amir_7008 Amir_7008 Amir_7008 8148082 8149290 + histidine kinase PFAM: histidine kinase dimerization and phosphoacceptor region%3B ATP-binding region ATPase domain protein~KEGG: scl:sce5432 putative two-component system sensor kinase gene gene7086 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7008 Amir_7009 Amir_7009 Amir_7009 8149340 8149996 + two component transcriptional regulator%2C LuxR family PFAM: response regulator receiver%3B regulatory protein LuxR%3B Sigma-70 region 4 type 2%3B sigma-70 region 4 domain protein~SMART: response regulator receiver%3B regulatory protein LuxR~KEGG: scl:sce5431 two-component system response regulator gene gene7087 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7009 Amir_7010 Amir_7010 Amir_7010 8150042 8150950 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: mxa:MXAN_3578 short chain dehydrogenase gene gene7088 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7010 Amir_7011 Amir_7011 Amir_7011 8151025 8151597 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: eum:ECUMN_4825 regulator of macrolide 2'- phosphotransferase I gene gene7089 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7011 Amir_7012 Amir_7012 Amir_7012 8151683 8152468 + HAD-superfamily hydrolase%2C subfamily IIB TIGRFAM: HAD-superfamily hydrolase%2C subfamily IIB~PFAM: Haloacid dehalogenase domain protein hydrolase type 3%3B Haloacid dehalogenase domain protein hydrolase%3B sucrose-6F-phosphate phosphohydrolase~KEGG: mno:Mnod_7133 Cof-like hydrolase gene gene7090 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7012 Amir_7013 Amir_7013 Amir_7013 8152577 8153338 + hypothetical protein KEGG: hypothetical protein gene gene7091 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7013 Amir_7014 Amir_7014 Amir_7014 8153575 8154741 - histidine kinase PFAM: ATP-binding region ATPase domain protein%3B histidine kinase dimerization and phosphoacceptor region~SMART: ATP-binding region ATPase domain protein~KEGG: scl:sce5432 putative two-component system sensor kinase gene gene7092 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7014 Amir_7015 Amir_7015 Amir_7015 8154911 8155009 + hypothetical protein gene gene7093 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7015 Amir_7016 Amir_7016 Amir_7016 8155091 8155810 - tRNA (guanine-N(7)-)-methyltransferase KEGG: tgr:Tgr7_3237 tRNA (guanine-N(7)-)- methyltransferase~TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase~PFAM: putative methyltransferase gene gene7094 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7016 Amir_7017 Amir_7017 Amir_7017 8155833 8156465 - hypothetical protein gene gene7095 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7017 Amir_7018 Amir_7018 Amir_7018 8156699 8158042 + peptidase S8 and S53 subtilisin kexin sedolisin PFAM: peptidase S8 and S53 subtilisin kexin sedolisin~KEGG: hypothetical protein gene gene7096 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7018 Amir_7019 Amir_7019 Amir_7019 8158201 8158974 - hypothetical protein KEGG: esa:ESA_01546 hypothetical protein gene gene7097 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7019 Amir_7020 Amir_7020 Amir_7020 8158971 8159891 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: bha:BH0445 ABC transporter ATP-binding protein gene gene7098 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7020 Amir_7021 Amir_7021 Amir_7021 8159888 8160004 - hypothetical protein gene gene7099 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7021 Amir_7022 Amir_7022 Amir_7022 8160106 8160537 + pyridoxamine 5'-phosphate oxidase-related FMN- binding PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding~KEGG: bja:blr4240 hypothetical protein gene gene7100 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7022 Amir_7023 Amir_7023 Amir_7023 8160638 8160994 - hypothetical protein gene gene7101 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7023 Amir_7024 Amir_7024 Amir_7024 8161086 8162390 + amidohydrolase PFAM: amidohydrolase%3B adenosine/AMP deaminase%3B Amidohydrolase 3~KEGG: tmz:Tmz1t_1721 amidohydrolase gene gene7102 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7024 Amir_7025 Amir_7025 Amir_7025 8162471 8163160 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B KR domain protein~KEGG: rce:RC1_3985 oxidoreductase%2C short chain dehydrogenase gene gene7103 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7025 Amir_7026 Amir_7026 Amir_7026 8163343 8165433 - protein of unknown function DUF839 PFAM: protein of unknown function DUF839~KEGG: mes:Meso_0954 twin-arginine translocation pathway signal gene gene7104 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7026 Amir_7027 Amir_7027 Amir_7027 8165608 8167641 - protein of unknown function DUF839 PFAM: protein of unknown function DUF839~KEGG: noc:Noc_2144 hypothetical protein gene gene7105 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7027 Amir_7028 Amir_7028 Amir_7028 8167702 8168862 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: rpc:RPC_3634 major facilitator transporter gene gene7106 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7028 Amir_7029 Amir_7029 Amir_7029 8168928 8169569 + HAD-superfamily hydrolase%2C subfamily IA%2C variant 3 TIGRFAM: HAD-superfamily hydrolase%2C subfamily IA%2C variant 3~PFAM: Haloacid dehalogenase domain protein hydrolase~KEGG: vei:Veis_2048 HAD-superfamily hydrolase%2C subfamily IA%2C variant 3 gene gene7107 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7029 Amir_7030 Amir_7030 Amir_7030 8169686 8170414 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B KR domain protein~KEGG: pna:Pnap_2712 short-chain dehydrogenase/reductase SDR gene gene7108 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7030 Amir_7031 Amir_7031 Amir_7031 8170546 8171637 - inositol 1-phosphate synthase TIGRFAM: inositol 1-phosphate synthase~PFAM: Myo-inositol-1-phosphate synthase%3B Myo- inositol-1-phosphate synthase GAPDH domain protein~KEGG: sme:SM_b20249 putative myo-inositol-1- phosphate synthase gene gene7109 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7031 Amir_7032 Amir_7032 Amir_7032 8171667 8172212 - transcriptional regulator%2C PadR-like family PFAM: transcriptional regulator PadR family protein~KEGG: dal:Dalk_2104 transcriptional regulator%2C PadR- like family gene gene7110 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7032 Amir_7033 Amir_7033 Amir_7033 8172378 8172782 + hypothetical protein gene gene7111 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7033 Amir_7034 Amir_7034 Amir_7034 8173119 8175635 + glycosyl transferase family 51 PFAM: glycosyl transferase family 51%3B penicillin- binding protein transpeptidase~KEGG: bsu:BSU37510 hypothetical protein gene gene7112 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7034 Amir_7035 Amir_7035 Amir_7035 8175765 8177324 + putative integral membrane protein KEGG: ade:Adeh_0166 integral membrane protein-like gene gene7113 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7035 Amir_7036 Amir_7036 Amir_7036 8177399 8178796 - putative integral membrane protein KEGG: afw:Anae109_0175 integral membrane protein- like protein gene gene7114 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7036 Amir_7037 Amir_7037 Amir_7037 8178793 8179563 - apurinic endonuclease Apn1 KEGG: pca:Pcar_3071 endonuclease IV~TIGRFAM: apurinic endonuclease Apn1~PFAM: Xylose isomerase domain protein TIM barrel~SMART: AP endonuclease family 2 gene gene7115 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7037 Amir_7038 Amir_7038 Amir_7038 8179740 8180720 + TAF4A RNA polymerase II%2C TATA box binding protein (TBP)-associated factor KEGG: Taf4a%3B TAF4A RNA polymerase II%2C TATA box binding protein (TBP)-associated factor%3B K03129 transcription initiation factor TFIID subunit D3 gene gene7116 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7038 Amir_7039 Amir_7039 Amir_7039 8180975 8181331 + ribosomal protein S6 TIGRFAM: ribosomal protein S6~PFAM: ribosomal protein S6~KEGG: bcy:Bcer98_4014 30S ribosomal protein S6 gene gene7117 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7039 Amir_7040 Amir_7040 Amir_7040 8181345 8181851 + single-strand binding protein TIGRFAM: single-strand binding protein~PFAM: single-strand binding protein/Primosomal replication protein n%3B nucleic acid binding OB-fold tRNA/helicase-type~KEGG: bsu:BSU40900 single-strand DNA-binding protein gene gene7118 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7040 Amir_7041 Amir_7041 Amir_7041 8181903 8182142 + ribosomal protein S18 TIGRFAM: ribosomal protein S18~PFAM: ribosomal protein S18~KEGG: dps:DP2596 30S ribosomal protein S18 gene gene7119 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7041 Amir_7042 Amir_7042 Amir_7042 8182162 8182617 + ribosomal protein L9 TIGRFAM: ribosomal protein L9~PFAM: ribosomal protein L9~KEGG: bcb:BCB4264_A5596 ribosomal protein L9 gene gene7120 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7042 Amir_7043 Amir_7043 Amir_7043 8183036 8185354 + replicative DNA helicase TIGRFAM: replicative DNA helicase~PFAM: DnaB domain protein helicase domain protein~KEGG: bcm:Bcenmc03_1893 DnaB domain-containing protein gene gene7121 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7043 Amir_7044 Amir_7044 Amir_7044 8186032 8186406 + anti-sigma-factor antagonist TIGRFAM: anti-anti-sigma factor~PFAM: Sulfate transporter/antisigma-factor antagonist STAS~KEGG: rru:Rru_A2907 anti-sigma-factor antagonist domain-containing protein gene gene7122 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7044 Amir_7045 Amir_7045 Amir_7045 8186431 8187183 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B KR domain protein~KEGG: nar:Saro_2963 short-chain dehydrogenase/reductase SDR gene gene7123 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7045 Amir_7046 Amir_7046 Amir_7046 8187270 8188106 + helix-turn-helix domain protein SMART: helix-turn-helix domain protein~KEGG: acr:Acry_0313 XRE family transcriptional regulator gene gene7124 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7046 Amir_7047 Amir_7047 Amir_7047 8188123 8189271 + Exonuclease RNase T and DNA polymerase III PFAM: Exonuclease RNase T and DNA polymerase III~SMART: Exonuclease~KEGG: rme:Rmet_3922 DNA polymerase III%2C epsilon subunit gene gene7125 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7047 Amir_7048 Amir_7048 Amir_7048 8189373 8190155 + diguanylate cyclase KEGG: pen:PSEEN1648 sensory box/GGDEF domain/EAL domain protein~TIGRFAM: diguanylate cyclase~PFAM: GGDEF domain containing protein~SMART: GGDEF domain containing protein gene gene7126 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7048 Amir_7049 Amir_7049 Amir_7049 8190298 8193360 - hypothetical protein KEGG: bch:Bcen2424_6767 outer membrane autotransporter gene gene7127 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7049 Amir_7050 Amir_7050 Amir_7050 8193537 8194379 - hypothetical protein KEGG: GK21216 gene product from transcript GK21216- RA gene gene7128 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7050 Amir_7051 Amir_7051 Amir_7051 8194664 8197108 - hypothetical protein KEGG: rce:RC1_0389 hypothetical protein gene gene7129 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7051 Amir_7052 Amir_7052 Amir_7052 8197240 8198448 + protein of unknown function UPF0118 PFAM: protein of unknown function UPF0118~KEGG: mxa:MXAN_7270 hypothetical protein gene gene7130 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7052 Amir_7053 Amir_7053 Amir_7053 8198464 8199663 - diguanylate cyclase KEGG: pca:Pcar_1107 two component signal transduction response regulator~TIGRFAM: diguanylate cyclase~PFAM: GGDEF domain containing protein~SMART: GGDEF domain containing protein gene gene7131 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7053 Amir_7054 Amir_7054 Amir_7054 8199826 8200971 + putative signal transduction histidine kinase PFAM: ATP-binding region ATPase domain protein~KEGG: bpl:BURPS1106A_1352 putative membrane sensor histidine kinase gene gene7132 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7054 Amir_7055 Amir_7055 Amir_7055 8200968 8201627 + two component transcriptional regulator%2C LuxR family PFAM: response regulator receiver%3B regulatory protein LuxR%3B Bacterio-opsin activator HTH domain protein~SMART: response regulator receiver%3B regulatory protein LuxR~KEGG: reh:H16_B2334 response regulator%2C NarL-family gene gene7133 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7055 Amir_7056 Amir_7056 Amir_7056 8201666 8201773 - hypothetical protein gene gene7134 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7056 Amir_7057 Amir_7057 Amir_7057 8201850 8202310 + pseudogene gene7135 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7057 Amir_7058 Amir_7058 Amir_7058 8202333 8202446 + hypothetical protein gene gene7136 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7058 Amir_7059 Amir_7059 Amir_7059 8202469 8203356 + hypothetical protein gene gene7137 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7059 Amir_7060 Amir_7060 Amir_7060 8203357 8203992 + hypothetical protein gene gene7138 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7060 Amir_7061 Amir_7061 Amir_7061 8203995 8204597 + protein of unknown function DUF1707 PFAM: protein of unknown function DUF1707~KEGG: swp:swp_3997 hypothetical protein gene gene7139 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7061 Amir_7062 Amir_7062 Amir_7062 8204631 8206169 + NmrA family protein PFAM: NmrA family protein%3B NAD-dependent epimerase/dehydratase%3B 3-beta hydroxysteroid dehydrogenase/isomerase%3B Male sterility domain%3B dTDP-4- dehydrorhamnose reductase~KEGG: dvl:Dvul_2879 NAD-dependent epimerase/dehydratase gene gene7140 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7062 Amir_7063 Amir_7063 Amir_7063 8206231 8207265 + Alcohol dehydrogenase GroES domain protein PFAM: Alcohol dehydrogenase GroES domain protein%3B Alcohol dehydrogenase zinc-binding domain protein~KEGG: sus:Acid_0475 L-threonine 3-dehydrogenase gene gene7141 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7063 Amir_7064 Amir_7064 Amir_7064 8207265 8208449 + 2-amino-3-ketobutyrate coenzyme A ligase KEGG: bpl:BURPS1106A_A0005 2-amino-3-ketobutyrate coenzyme A ligase~TIGRFAM: 2-amino-3-ketobutyrate coenzyme A ligase~PFAM: aminotransferase class I and II%3B aminotransferase class-III gene gene7142 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7064 Amir_7065 Amir_7065 Amir_7065 8208534 8209418 + transcriptional regulator%2C LysR family PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: pmy:Pmen_4546 LysR family transcriptional regulator gene gene7143 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7065 Amir_7066 Amir_7066 Amir_7066 8209394 8209726 - hypothetical protein gene gene7144 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7066 Amir_7067 Amir_7067 Amir_7067 8210320 8211402 - hypothetical protein KEGG: sfu:Sfum_3180 hypothetical protein gene gene7145 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7067 Amir_7068 Amir_7068 Amir_7068 8211547 8211978 - hypothetical protein gene gene7146 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7068 Amir_7069 Amir_7069 Amir_7069 8211993 8213624 - phosphoenolpyruvate-protein phosphotransferase TIGRFAM: phosphoenolpyruvate-protein phosphotransferase~PFAM: PEP-utilizing protein%3B PEP-utilising protein mobile region%3B PEP-utilising protein domain protein~KEGG: scl:sce2489 fructose-specific MTP gene gene7147 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7069 Amir_7070 Amir_7070 Amir_7070 8213696 8214547 - PfkB domain protein PFAM: PfkB domain protein~KEGG: bmj:BMULJ_01615 ribokinase gene gene7148 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7070 Amir_7071 Amir_7071 Amir_7071 8214662 8216581 + hypothetical protein KEGG: mpo:Mpop_4712 hypothetical protein gene gene7149 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7071 Amir_7072 Amir_7072 Amir_7072 8216872 8219004 - MMPL domain protein PFAM: MMPL domain protein~KEGG: bcr:BCAH187_A1444 putative transporter gene gene7150 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7072 Amir_7073 Amir_7073 Amir_7073 8219133 8219879 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: mes:Meso_0701 transcriptional regulator%2C TetR family gene gene7151 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7073 Amir_7074 Amir_7074 Amir_7074 8219961 8222765 - leucyl-tRNA synthetase TIGRFAM: leucyl-tRNA synthetase~KEGG: rle:RL2798 putative leucyl-tRNA synthetase gene gene7152 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7074 Amir_7075 Amir_7075 Amir_7075 8222941 8223471 + hypothetical protein KEGG: hypothetical protein gene gene7153 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7075 Amir_7076 Amir_7076 Amir_7076 8223494 8224075 - protein of unknown function DUF179 PFAM: protein of unknown function DUF179~KEGG: aeh:Mlg_0349 hypothetical protein gene gene7154 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7076 Amir_7077 Amir_7077 Amir_7077 8224166 8225476 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: bav:BAV0769 transporter gene gene7155 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7077 Amir_7078 Amir_7078 Amir_7078 8225459 8225725 - pseudogene gene7156 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7078 Amir_7079 Amir_7079 Amir_7079 8225881 8227389 - polynucleotide adenylyltransferase/metal dependent phosphohydrolase KEGG: hypothetical protein~TIGRFAM: tRNA adenylyltransferase%3B metal dependent phophohydrolase~PFAM: Polynucleotide adenylyltransferase region%3B metal-dependent phosphohydrolase HD sub domain~SMART: metal-dependent phosphohydrolase HD region gene gene7157 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7079 Amir_7080 Amir_7080 Amir_7080 8227525 8228049 + NUDIX hydrolase PFAM: NUDIX hydrolase~KEGG: mxa:MXAN_4891 hydrolase%2C NUDIX family gene gene7158 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7080 Amir_7081 Amir_7081 Amir_7081 8228046 8230340 + hypothetical protein KEGG: ccs:CCNA_00415 hypothetical protein gene gene7159 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7081 Amir_7082 Amir_7082 Amir_7082 8230406 8231971 + virulence factor MVIN family protein PFAM: virulence factor MVIN family protein~KEGG: glo:Glov_2048 integral membrane protein MviN gene gene7160 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7082 Amir_7083 Amir_7083 Amir_7083 8232009 8233517 + hypothetical protein KEGG: azo:azo3774 putative serine/threonine protein kinase gene gene7161 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7083 Amir_7084 Amir_7084 Amir_7084 8233657 8234268 + RNA polymerase%2C sigma-24 subunit%2C ECF subfamily TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family~PFAM: sigma-70 region 2 domain protein%3B Sigma-70 region 4 type 2%3B sigma-70 region 4 domain protein~KEGG: sus:Acid_7940 ECF subfamily RNA polymerase sigma-24 factor gene gene7162 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7084 Amir_7085 Amir_7085 Amir_7085 8234265 8235128 + hypothetical protein KEGG: mno:Mnod_6604 hypothetical protein gene gene7163 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7085 Amir_7086 Amir_7086 Amir_7086 8235340 8236335 + thioredoxin reductase KEGG: acp:A2cp1_4094 thioredoxin reductase~TIGRFAM: thioredoxin reductase~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase gene gene7164 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7086 Amir_7087 Amir_7087 Amir_7087 8236364 8236690 + thioredoxin TIGRFAM: thioredoxin~PFAM: Thioredoxin domain~KEGG: gdi:GDI0716 putative thioredoxin gene gene7165 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7087 Amir_7088 Amir_7088 Amir_7088 8236887 8238026 + cell wall hydrolase/autolysin PFAM: cell wall hydrolase/autolysin%3B Peptidoglycan- binding domain 1 protein~SMART: cell wall hydrolase/autolysin~KEGG: bha:BH3665 N-acetylmuramoyl-L-alanine amidase (major autolysin) gene gene7166 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7088 Amir_7089 Amir_7089 Amir_7089 8238152 8238784 - hypothetical protein gene gene7167 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7089 Amir_7090 Amir_7090 Amir_7090 8238936 8240252 + putative transcriptional regulator%2C GntR family PFAM: aminotransferase class I and II~KEGG: mxa:MXAN_0212 aminotransferase%2C class I and II family protein gene gene7168 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7090 Amir_7091 Amir_7091 Amir_7091 8240266 8241210 + D-alanine--D-alanine ligase PFAM: D-alanine--D-alanine ligase domain protein%3B ATP-dependent carboxylate-amine ligase domain protein ATP- grasp~KEGG: afw:Anae109_3887 D-alanine--D-alanine ligase gene gene7169 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7091 Amir_7092 Amir_7092 Amir_7092 8241299 8242294 - parB-like partition protein KEGG: acp:A2cp1_4509 ParB-like partition protein~TIGRFAM: parB-like partition protein~PFAM: ParB domain protein nuclease~SMART: ParB domain protein nuclease gene gene7170 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7092 Amir_7093 Amir_7093 Amir_7093 8242291 8243310 - Cobyrinic acid ac-diamide synthase PFAM: Cobyrinic acid ac-diamide synthase~KEGG: bsu:BSU40970 chromosome partitioning protein%3B transcriptional regulator gene gene7171 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7093 Amir_7094 Amir_7094 Amir_7094 8243312 8243983 - methyltransferase GidB TIGRFAM: methyltransferase GidB~PFAM: glucose inhibited division protein~KEGG: cak:Caul_5025 methyltransferase GidB gene gene7172 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7094 Amir_7095 Amir_7095 Amir_7095 8244537 8245004 - NUDIX hydrolase PFAM: NUDIX hydrolase~KEGG: bcr:BCAH187_A2810 MutT/NUDIX family protein gene gene7173 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7095 Amir_7096 Amir_7096 Amir_7096 8245383 8245934 - single-stranded nucleic acid binding R3H domain protein PFAM: single-stranded nucleic acid binding R3H domain protein~SMART: single-stranded nucleic acid binding R3H domain protein~KEGG: bha:BH4063 spoIIIJ-associated protein gene gene7174 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7096 Amir_7097 Amir_7097 Amir_7097 8245963 8247039 - 60 kDa inner membrane insertion protein PFAM: 60 kDa inner membrane insertion protein~KEGG: mmw:Mmwyl1_4485 60 kDa inner membrane insertion protein gene gene7175 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7097 Amir_7098 Amir_7098 Amir_7098 8247043 8247312 - protein of unknown function DUF37 PFAM: protein of unknown function DUF37~KEGG: ade:Adeh_4359 hypothetical protein gene gene7176 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7098 Amir_7099 Amir_7099 Amir_7099 8247309 8247554 - ribonuclease P protein PFAM: ribonuclease P protein~KEGG: sal:Sala_0006 ribonuclease P protein component gene gene7177 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7099 Amir_7100 Amir_7100 Amir_7100 8247667 8247810 - ribosomal protein L34 TIGRFAM: ribosomal protein L34~PFAM: ribosomal protein L34~KEGG: aba:Acid345_0220 LSU ribosomal protein L34P gene gene7178 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_7100 Amir_R0001 Amir_R0001 Amir_R0001 12199 12275 + tRNA-Ile tRNA-Ile1 tRNA gene8 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0001 Amir_R0002 Amir_R0002 Amir_R0002 12465 12537 + tRNA-Ala tRNA-Ala1 tRNA gene10 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0002 Amir_R0003 Amir_R0003 Amir_R0003 31268 31353 + tRNA-Leu tRNA-Leu1 tRNA gene29 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0003 Amir_R0004 Amir_R0004 Amir_R0004 70827 70899 - tRNA-Gly tRNA-Gly5 tRNA gene63 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0004 Amir_R0005 Amir_R0005 Amir_R0005 156905 156989 + tRNA-Ser tRNA-Ser1 tRNA gene148 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0005 Amir_R0006 Amir_R0006 Amir_R0006 166068 166159 + tRNA-Ser tRNA-Ser2 tRNA gene157 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0006 Amir_R0007 Amir_R0007 Amir_R0007 166198 166273 + tRNA-Arg tRNA-Arg1 tRNA gene158 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0007 Amir_R0008 Amir_R0008 Amir_R0008 186714 186798 + tRNA-Ser tRNA-Ser3 tRNA gene178 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0008 Amir_R0009 Amir_R0009 Amir_R0009 210110 210194 - tRNA-Ser tRNA-Ser4 tRNA gene205 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0009 Amir_R0010 Amir_R0010 ffs ffs 215465 215564 + SRP RNA%3B RNA component of signal recognitionparti cle gene gene209 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0010 Amir_R0011 Amir_R0011 Amir_R0011 219650 221154 + 16S ribosomal RNA RNAmmer 1.2%2C Lagesen et al.%2C Nucleic Acids Res. Apr2 2%2C 2007 rRNA gene214 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0011 Amir_R0012 Amir_R0012 Amir_R0012 221505 224583 + 23S ribosomal RNA RNAmmer 1.2%2C Lagesen et al.%2C Nucleic Acids Res. Apr2 2%2C 2007 rRNA gene215 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0012 Amir_R0013 Amir_R0013 Amir_R0013 224708 224824 + 5S ribosomal RNA 5S ribosomal RNA as predicted by Rfam (RF00001)%2Cscor e 53.56 rRNA gene216 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0013 Amir_R0014 Amir_R0014 Amir_R0014 224710 224825 + 5S ribosomal RNA RNAmmer 1.2%2C Lagesen et al.%2C Nucleic Acids Res. Apr2 2%2C 2007 rRNA gene217 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0014 Amir_R0015 Amir_R0015 Amir_R0015 258064 258140 - tRNA-Pro tRNA-Pro3 tRNA gene246 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0015 Amir_R0016 Amir_R0016 Amir_R0016 322589 322662 + tRNA-Thr tRNA-Thr1 tRNA gene309 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0016 Amir_R0017 Amir_R0017 Amir_R0017 406492 406567 + tRNA-Thr tRNA-Thr2 tRNA gene389 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0017 Amir_R0018 Amir_R0018 Amir_R0018 662462 662534 - tRNA-Arg tRNA-Arg4 tRNA gene615 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0018 Amir_R0019 Amir_R0019 Amir_R0019 694477 694549 + tRNA-Ala tRNA-Ala2 tRNA gene649 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0019 Amir_R0020 Amir_R0020 Amir_R0020 728000 728073 - tRNA-Gln tRNA-Gln2 tRNA gene677 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0020 Amir_R0021 Amir_R0021 Amir_R0021 767920 767994 + tRNA-Leu tRNA-Leu2 tRNA gene711 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0021 Amir_R0022 Amir_R0022 rnpB rnpB 974692 975036 + RNA component of RNaseP Bacterial RNase P class A as predicted by Rfam(RF000 10)%2C score 214.07 gene gene903 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0022 Amir_R0023 Amir_R0023 Amir_R0023 1008774 1010278 + 16S ribosomal RNA RNAmmer 1.2%2C Lagesen et al.%2C Nucleic Acids Res. Apr2 2%2C 2007 rRNA gene932 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0023 Amir_R0024 Amir_R0024 Amir_R0024 1010624 1013650 + 23S ribosomal RNA RNAmmer 1.2%2C Lagesen et al.%2C Nucleic Acids Res. Apr2 2%2C 2007 rRNA gene933 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0024 Amir_R0025 Amir_R0025 Amir_R0025 1047389 1047465 + tRNA-Met tRNA-Met1 tRNA gene965 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0025 Amir_R0026 Amir_R0026 Amir_R0026 1047700 1047776 + tRNA-Met tRNA-Met2 tRNA gene966 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0026 Amir_R0027 Amir_R0027 Amir_R0027 1048004 1048080 + tRNA-Met tRNA-Met3 tRNA gene967 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0027 Amir_R0028 Amir_R0028 ssrA ssrA 1054909 1055281 + tmRNA as predicted by Rfam (RF00023)%2C score 113.63 tmRNA gene976 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0028 Amir_R0029 Amir_R0029 Amir_R0029 1064385 1064460 + tRNA-Ala tRNA-Ala3 tRNA gene984 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0029 Amir_R0030 Amir_R0030 Amir_R0030 1139227 1139302 - tRNA-Leu tRNA-Leu6 tRNA gene1057 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0030 Amir_R0031 Amir_R0031 Amir_R0031 1170947 1171019 - tRNA-Lys tRNA-Lys2 tRNA gene1083 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0031 Amir_R0032 Amir_R0032 Amir_R0032 1174188 1174263 - tRNA-His tRNA-His2 tRNA gene1086 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0032 Amir_R0033 Amir_R0033 Amir_R0033 1238174 1238246 - tRNA-Arg tRNA-Arg3 tRNA gene1150 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0033 Amir_R0034 Amir_R0034 Amir_R0034 1281292 1281365 - tRNA-Gly tRNA-Gly4 tRNA gene1183 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0034 Amir_R0035 Amir_R0035 Amir_R0035 1281427 1281500 + tRNA-Pro tRNA-Pro1 tRNA gene1184 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0035 Amir_R0036 Amir_R0036 Amir_R0036 1430483 1430557 - tRNA-Met tRNA-Met5 tRNA gene1329 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0036 Amir_R0037 Amir_R0037 Amir_R0037 1431640 1431711 - tRNA-Asn tRNA-Asn1 tRNA gene1331 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0037 Amir_R0038 Amir_R0038 Amir_R0038 1480319 1480393 + tRNA-Val tRNA-Val1 tRNA gene1373 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0038 Amir_R0039 Amir_R0039 Amir_R0039 1686555 1688059 + 16S ribosomal RNA RNAmmer 1.2%2C Lagesen et al.%2C Nucleic Acids Res. Apr2 2%2C 2007 rRNA gene1565 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0039 Amir_R0040 Amir_R0040 Amir_R0040 1688405 1691482 + 23S ribosomal RNA RNAmmer 1.2%2C Lagesen et al.%2C Nucleic Acids Res. Apr2 2%2C 2007 rRNA gene1566 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0040 Amir_R0041 Amir_R0041 Amir_R0041 1691611 1691727 + 5S ribosomal RNA 5S ribosomal RNA as predicted by Rfam (RF00001)%2Cscor e 53.56 rRNA gene1567 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0041 Amir_R0042 Amir_R0042 Amir_R0042 1691613 1691728 + 5S ribosomal RNA RNAmmer 1.2%2C Lagesen et al.%2C Nucleic Acids Res. Apr2 2%2C 2007 rRNA gene1568 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0042 Amir_R0043 Amir_R0043 Amir_R0043 1781567 1781640 + tRNA-Pro tRNA-Pro2 tRNA gene1660 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0043 Amir_R0044 Amir_R0044 Amir_R0044 2234118 2234189 - tRNA-Val tRNA-Val4 tRNA gene2057 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0044 Amir_R0045 Amir_R0045 Amir_R0045 2234191 2234262 - tRNA-Cys tRNA-Cys1 tRNA gene2058 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0045 Amir_R0046 Amir_R0046 Amir_R0046 2234323 2234395 - tRNA-Gly tRNA-Gly3 tRNA gene2059 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0046 Amir_R0047 Amir_R0047 Amir_R0047 2237137 2237211 + tRNA-Val tRNA-Val2 tRNA gene2064 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0047 Amir_R0048 Amir_R0048 Amir_R0048 3457184 3457257 + tRNA-Leu tRNA-Leu3 tRNA gene3036 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0048 Amir_R0049 Amir_R0049 Amir_R0049 4409046 4409121 + tRNA-Trp tRNA-Trp1 tRNA gene3798 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0049 Amir_R0050 Amir_R0050 Amir_R0050 4409157 4409232 + tRNA-His tRNA-His1 tRNA gene3799 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0050 Amir_R0051 Amir_R0051 Amir_R0051 4538336 4538410 + tRNA-Val tRNA-Val3 tRNA gene3922 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0051 Amir_R0052 Amir_R0052 Amir_R0052 5010745 5010818 - tRNA-Glu tRNA-Glu4 tRNA gene4302 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0052 Amir_R0053 Amir_R0053 Amir_R0053 5010893 5010966 - tRNA-Gly tRNA-Gly2 tRNA gene4303 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0053 Amir_R0054 Amir_R0054 Amir_R0054 5011064 5011137 - tRNA-Ala tRNA-Ala5 tRNA gene4304 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0054 Amir_R0055 Amir_R0055 Amir_R0055 5011179 5011255 - tRNA-Ala tRNA-Ala4 tRNA gene4305 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0055 Amir_R0056 Amir_R0056 Amir_R0056 5388834 5388919 + tRNA-Leu tRNA-Leu4 tRNA gene4599 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0056 Amir_R0057 Amir_R0057 Amir_R0057 6126031 6126146 - 5S ribosomal RNA RNAmmer 1.2%2C Lagesen et al.%2C Nucleic Acids Res. Apr2 2%2C 2007 rRNA gene5198 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0057 Amir_R0058 Amir_R0058 Amir_R0058 6126032 6126148 - 5S ribosomal RNA 5S ribosomal RNA as predicted by Rfam (RF00001)%2Cscor e 53.56 rRNA gene5199 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0058 Amir_R0059 Amir_R0059 Amir_R0059 6126273 6129350 - 23S ribosomal RNA RNAmmer 1.2%2C Lagesen et al.%2C Nucleic Acids Res. Apr2 2%2C 2007 rRNA gene5200 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0059 Amir_R0060 Amir_R0060 Amir_R0060 6129696 6131200 - 16S ribosomal RNA RNAmmer 1.2%2C Lagesen et al.%2C Nucleic Acids Res. Apr2 2%2C 2007 rRNA gene5201 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0060 Amir_R0061 Amir_R0061 Amir_R0061 6464679 6464794 - 5S ribosomal RNA RNAmmer 1.2%2C Lagesen et al.%2C Nucleic Acids Res. Apr2 2%2C 2007 rRNA gene5504 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0061 Amir_R0062 Amir_R0062 Amir_R0062 6464680 6464796 - 5S ribosomal RNA 5S ribosomal RNA as predicted by Rfam (RF00001)%2Cscor e 53.56 rRNA gene5505 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0062 Amir_R0063 Amir_R0063 Amir_R0063 6464925 6468002 - 23S ribosomal RNA RNAmmer 1.2%2C Lagesen et al.%2C Nucleic Acids Res. Apr2 2%2C 2007 rRNA gene5506 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0063 Amir_R0064 Amir_R0064 Amir_R0064 6468349 6469854 - 16S ribosomal RNA RNAmmer 1.2%2C Lagesen et al.%2C Nucleic Acids Res. Apr2 2%2C 2007 rRNA gene5507 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0064 Amir_R0065 Amir_R0065 Amir_R0065 6660070 6660146 - tRNA-Leu tRNA-Leu5 tRNA gene5711 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0065 Amir_R0066 Amir_R0066 Amir_R0066 7052607 7052679 - tRNA-Glu tRNA-Glu3 tRNA gene6072 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0066 Amir_R0067 Amir_R0067 Amir_R0067 7052741 7052816 - tRNA-Glu tRNA-Glu2 tRNA gene6073 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0067 Amir_R0068 Amir_R0068 Amir_R0068 7052877 7052948 - tRNA-Gln tRNA-Gln1 tRNA gene6074 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0068 Amir_R0069 Amir_R0069 Amir_R0069 7221879 7221953 + tRNA-Arg tRNA-Arg2 tRNA gene6230 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0069 Amir_R0070 Amir_R0070 Amir_R0070 7617132 7617204 - tRNA-OTHER tRNA-Undet1 tRNA gene6549 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0070 Amir_R0071 Amir_R0071 Amir_R0071 7777322 7777394 - tRNA-Trp tRNA-Trp2 tRNA gene6712 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0071 Amir_R0072 Amir_R0072 Amir_R0072 7781631 7781703 - tRNA-Met tRNA-Met4 tRNA gene6719 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0072 Amir_R0073 Amir_R0073 Amir_R0073 7781748 7781823 - tRNA-Thr tRNA-Thr3 tRNA gene6720 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0073 Amir_R0074 Amir_R0074 Amir_R0074 7787474 7787557 - tRNA-Tyr tRNA-Tyr1 tRNA gene6725 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0074 Amir_R0075 Amir_R0075 Amir_R0075 7929685 7929761 - tRNA-Phe tRNA-Phe1 tRNA gene6868 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0075 Amir_R0076 Amir_R0076 Amir_R0076 7929793 7929869 - tRNA-Asp tRNA-Asp1 tRNA gene6869 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0076 Amir_R0077 Amir_R0077 Amir_R0077 7929904 7929976 - tRNA-Glu tRNA-Glu1 tRNA gene6870 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0077 Amir_R0078 Amir_R0078 Amir_R0078 7945376 7945451 + tRNA-Lys tRNA-Lys1 tRNA gene6883 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0078 Amir_R0079 Amir_R0079 Amir_R0079 8091012 8091082 + tRNA-Gly tRNA-Gly1 tRNA gene7037 http://www.ncbi.nlm.nih.gov/gene/?term=Amir_R0079